Query 018565
Match_columns 354
No_of_seqs 202 out of 1978
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 17:15:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018565.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018565hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 5.1E-57 1.8E-61 419.3 33.3 334 9-354 1-345 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 1.5E-53 5.1E-58 397.6 35.4 341 10-354 13-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 100.0 9.2E-52 3.1E-56 386.2 35.3 341 10-354 14-366 (368)
4 3lst_A CALO1 methyltransferase 100.0 1.4E-51 4.7E-56 382.6 34.6 325 13-354 18-347 (348)
5 3gwz_A MMCR; methyltransferase 100.0 9.1E-51 3.1E-55 379.8 32.4 322 16-354 37-368 (369)
6 3i53_A O-methyltransferase; CO 100.0 7.6E-51 2.6E-55 375.4 27.5 317 18-354 6-331 (332)
7 1zg3_A Isoflavanone 4'-O-methy 100.0 3.5E-50 1.2E-54 374.7 30.9 341 11-354 4-358 (358)
8 2ip2_A Probable phenazine-spec 100.0 2E-49 6.7E-54 366.3 32.6 319 16-354 7-333 (334)
9 1fp2_A Isoflavone O-methyltran 100.0 1.9E-49 6.5E-54 368.9 31.8 339 9-354 8-352 (352)
10 1fp1_D Isoliquiritigenin 2'-O- 100.0 2E-49 7E-54 371.3 30.0 343 6-354 11-372 (372)
11 3dp7_A SAM-dependent methyltra 100.0 4.3E-47 1.5E-51 354.2 27.4 327 11-354 9-354 (363)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 3.3E-46 1.1E-50 349.9 27.7 323 16-354 15-355 (374)
13 1tw3_A COMT, carminomycin 4-O- 100.0 6.7E-46 2.3E-50 346.1 28.4 322 17-354 19-355 (360)
14 3mcz_A O-methyltransferase; ad 100.0 4.4E-45 1.5E-49 339.6 30.3 320 9-354 16-348 (352)
15 1x19_A CRTF-related protein; m 100.0 4.2E-45 1.4E-49 340.5 29.6 317 8-354 21-358 (359)
16 2r3s_A Uncharacterized protein 100.0 7.3E-45 2.5E-49 335.8 27.2 317 18-353 7-333 (335)
17 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.9E-21 6.3E-26 172.4 14.8 165 187-354 68-256 (261)
18 3dtn_A Putative methyltransfer 99.8 2.1E-19 7.2E-24 156.6 18.6 174 177-354 33-225 (234)
19 3dh0_A SAM dependent methyltra 99.8 3.1E-18 1.1E-22 147.6 16.2 155 177-354 27-192 (219)
20 1ve3_A Hypothetical protein PH 99.8 1.5E-18 5.1E-23 150.3 11.7 160 189-354 38-226 (227)
21 3dlc_A Putative S-adenosyl-L-m 99.8 9.9E-19 3.4E-23 150.3 9.9 168 177-353 34-213 (219)
22 3hnr_A Probable methyltransfer 99.8 3.4E-18 1.2E-22 147.4 12.9 158 187-353 43-210 (220)
23 3ujc_A Phosphoethanolamine N-m 99.8 9.6E-18 3.3E-22 148.7 15.7 155 177-344 45-207 (266)
24 3ou2_A SAM-dependent methyltra 99.8 2.3E-17 7.8E-22 141.8 16.4 151 187-344 44-206 (218)
25 3bus_A REBM, methyltransferase 99.8 2.5E-17 8.7E-22 146.8 17.1 156 177-344 51-217 (273)
26 3pfg_A N-methyltransferase; N, 99.7 7.1E-18 2.4E-22 149.6 12.2 163 188-354 49-248 (263)
27 1vl5_A Unknown conserved prote 99.7 1.2E-17 4.1E-22 147.9 13.2 154 176-343 26-190 (260)
28 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.1E-17 3.8E-22 147.4 12.8 149 177-344 83-239 (254)
29 1kpg_A CFA synthase;, cyclopro 99.7 3.9E-17 1.3E-21 146.7 16.1 162 177-343 54-228 (287)
30 2o57_A Putative sarcosine dime 99.7 5.1E-17 1.7E-21 146.7 16.6 145 187-344 80-235 (297)
31 1nkv_A Hypothetical protein YJ 99.7 4.3E-17 1.5E-21 143.8 14.8 152 177-343 26-187 (256)
32 3vc1_A Geranyl diphosphate 2-C 99.7 1.4E-16 4.7E-21 145.0 17.8 163 168-344 97-270 (312)
33 3hem_A Cyclopropane-fatty-acyl 99.7 8.1E-17 2.8E-21 145.8 15.7 160 177-345 62-245 (302)
34 3f4k_A Putative methyltransfer 99.7 1.3E-16 4.3E-21 140.9 16.6 152 178-345 36-198 (257)
35 2qm3_A Predicted methyltransfe 99.7 2.4E-16 8.3E-21 146.8 19.0 214 41-289 47-279 (373)
36 3ocj_A Putative exported prote 99.7 4.4E-17 1.5E-21 147.8 13.6 166 187-354 116-303 (305)
37 3bxo_A N,N-dimethyltransferase 99.7 3.4E-17 1.2E-21 142.8 11.9 163 188-354 39-238 (239)
38 3h2b_A SAM-dependent methyltra 99.7 4E-17 1.4E-21 139.0 11.8 138 190-345 42-184 (203)
39 3dli_A Methyltransferase; PSI- 99.7 1.1E-16 3.8E-21 139.9 14.8 141 187-344 39-185 (240)
40 1xxl_A YCGJ protein; structura 99.7 6.9E-17 2.3E-21 141.3 13.3 152 178-343 12-174 (239)
41 3lcc_A Putative methyl chlorid 99.7 8.2E-17 2.8E-21 140.3 13.4 133 190-345 67-209 (235)
42 2qe6_A Uncharacterized protein 99.7 1.4E-16 4.7E-21 142.1 15.1 140 189-339 77-238 (274)
43 3mgg_A Methyltransferase; NYSG 99.7 6.7E-17 2.3E-21 144.3 13.0 153 187-343 35-198 (276)
44 2fk8_A Methoxy mycolic acid sy 99.7 1.5E-16 5.2E-21 145.1 15.5 161 177-343 80-254 (318)
45 3kkz_A Uncharacterized protein 99.7 1.5E-16 5.2E-21 141.4 15.1 151 179-345 37-198 (267)
46 1pjz_A Thiopurine S-methyltran 99.7 6.7E-17 2.3E-21 137.8 11.8 134 187-343 20-176 (203)
47 4fsd_A Arsenic methyltransfera 99.7 2.1E-16 7.1E-21 147.9 15.9 144 188-342 82-250 (383)
48 3i9f_A Putative type 11 methyl 99.7 5E-17 1.7E-21 134.3 9.9 141 187-353 15-158 (170)
49 3g5l_A Putative S-adenosylmeth 99.7 1.9E-16 6.5E-21 139.5 14.1 159 177-343 34-216 (253)
50 3l8d_A Methyltransferase; stru 99.7 3.2E-16 1.1E-20 137.0 14.7 142 188-343 52-200 (242)
51 3g2m_A PCZA361.24; SAM-depende 99.7 1.7E-16 5.8E-21 143.5 13.2 161 190-353 83-290 (299)
52 2ex4_A Adrenal gland protein A 99.7 1.3E-16 4.4E-21 139.6 11.9 139 189-345 79-227 (241)
53 2p7i_A Hypothetical protein; p 99.7 2.8E-16 9.6E-21 137.6 14.1 148 189-343 42-199 (250)
54 3jwg_A HEN1, methyltransferase 99.7 3.9E-16 1.3E-20 134.4 12.9 143 188-340 28-189 (219)
55 3bkw_A MLL3908 protein, S-aden 99.7 2E-15 7E-20 131.8 17.4 160 178-343 34-214 (243)
56 3sm3_A SAM-dependent methyltra 99.7 7.2E-16 2.5E-20 133.9 14.4 149 188-343 29-207 (235)
57 3e23_A Uncharacterized protein 99.7 2.6E-16 9E-21 134.7 11.1 138 187-343 41-182 (211)
58 3ege_A Putative methyltransfer 99.7 7.2E-16 2.5E-20 136.6 14.1 151 177-343 24-178 (261)
59 3gu3_A Methyltransferase; alph 99.7 7.5E-16 2.6E-20 138.2 14.3 153 187-343 20-190 (284)
60 3ccf_A Cyclopropane-fatty-acyl 99.7 5.8E-16 2E-20 138.5 11.9 154 177-343 47-210 (279)
61 2xvm_A Tellurite resistance pr 99.7 2.3E-15 7.8E-20 127.4 14.9 142 178-343 23-173 (199)
62 2p35_A Trans-aconitate 2-methy 99.6 9.7E-16 3.3E-20 135.3 12.5 150 177-338 23-185 (259)
63 1y8c_A S-adenosylmethionine-de 99.6 1.2E-15 4.1E-20 133.4 12.9 152 189-343 37-225 (246)
64 3jwh_A HEN1; methyltransferase 99.6 4.4E-16 1.5E-20 134.0 9.6 142 188-339 28-188 (217)
65 3g07_A 7SK snRNA methylphospha 99.6 2.8E-16 9.4E-21 141.6 7.5 146 188-343 45-269 (292)
66 4htf_A S-adenosylmethionine-de 99.6 1.1E-15 3.7E-20 137.2 11.3 148 189-345 68-234 (285)
67 3e8s_A Putative SAM dependent 99.6 1.4E-15 4.8E-20 131.3 11.5 146 187-342 50-208 (227)
68 3bkx_A SAM-dependent methyltra 99.6 3.7E-15 1.3E-19 132.9 14.0 159 178-343 34-219 (275)
69 3d2l_A SAM-dependent methyltra 99.6 4.4E-15 1.5E-19 129.7 14.0 94 189-286 33-136 (243)
70 2gb4_A Thiopurine S-methyltran 99.6 3.5E-15 1.2E-19 131.3 13.3 133 188-343 67-227 (252)
71 3ggd_A SAM-dependent methyltra 99.6 2E-15 6.8E-20 132.3 11.4 151 187-343 54-219 (245)
72 1vlm_A SAM-dependent methyltra 99.6 7.4E-15 2.5E-19 126.5 13.7 137 190-343 48-188 (219)
73 3cgg_A SAM-dependent methyltra 99.6 2.1E-14 7.1E-19 120.8 14.9 125 188-343 45-175 (195)
74 3cc8_A Putative methyltransfer 99.6 1.5E-14 5.1E-19 125.0 14.2 155 176-344 22-186 (230)
75 2yqz_A Hypothetical protein TT 99.6 1.2E-14 4.1E-19 128.4 13.9 146 187-341 37-194 (263)
76 2p8j_A S-adenosylmethionine-de 99.6 4E-15 1.4E-19 127.0 9.4 152 187-341 21-181 (209)
77 2i62_A Nicotinamide N-methyltr 99.6 8.3E-15 2.8E-19 129.7 11.2 141 187-344 54-240 (265)
78 2aot_A HMT, histamine N-methyl 99.6 1.5E-14 5E-19 130.3 12.2 142 188-340 51-218 (292)
79 2a14_A Indolethylamine N-methy 99.6 4.2E-15 1.4E-19 131.8 8.0 141 187-344 53-239 (263)
80 1ri5_A MRNA capping enzyme; me 99.6 2.1E-14 7.1E-19 129.3 12.3 154 188-344 63-251 (298)
81 4hg2_A Methyltransferase type 99.6 1.3E-14 4.5E-19 127.8 10.5 96 189-290 39-138 (257)
82 3thr_A Glycine N-methyltransfe 99.5 4E-15 1.4E-19 133.9 6.9 99 187-288 55-176 (293)
83 3g5t_A Trans-aconitate 3-methy 99.5 5.6E-14 1.9E-18 126.9 14.0 99 188-290 35-152 (299)
84 3m70_A Tellurite resistance pr 99.5 4E-14 1.4E-18 126.9 12.6 132 188-341 119-258 (286)
85 2zfu_A Nucleomethylin, cerebra 99.5 7.3E-14 2.5E-18 119.8 13.6 122 188-354 66-190 (215)
86 1wzn_A SAM-dependent methyltra 99.5 2.7E-13 9.2E-18 119.1 17.2 104 178-286 32-144 (252)
87 4e2x_A TCAB9; kijanose, tetron 99.5 4.1E-14 1.4E-18 133.8 12.5 150 176-344 96-254 (416)
88 1fbn_A MJ fibrillarin homologu 99.5 1.2E-13 4.2E-18 119.8 14.2 140 187-353 72-226 (230)
89 2kw5_A SLR1183 protein; struct 99.5 1.9E-13 6.5E-18 116.0 13.8 133 189-343 30-171 (202)
90 2g72_A Phenylethanolamine N-me 99.5 1.9E-14 6.4E-19 129.4 7.5 139 189-344 71-257 (289)
91 3giw_A Protein of unknown func 99.5 1.6E-13 5.6E-18 120.4 13.0 141 189-339 78-243 (277)
92 3ofk_A Nodulation protein S; N 99.5 3.4E-14 1.2E-18 121.9 7.9 99 187-288 49-155 (216)
93 3grz_A L11 mtase, ribosomal pr 99.5 2E-13 6.9E-18 116.2 12.5 130 188-354 59-196 (205)
94 3e05_A Precorrin-6Y C5,15-meth 99.5 7.2E-13 2.5E-17 112.6 15.8 124 178-340 31-164 (204)
95 3mq2_A 16S rRNA methyltransfer 99.5 1.1E-13 3.8E-18 119.0 10.3 143 187-344 25-185 (218)
96 3p2e_A 16S rRNA methylase; met 99.5 1.5E-13 5.3E-18 118.7 9.6 146 188-344 23-186 (225)
97 3q87_B N6 adenine specific DNA 99.5 1E-12 3.4E-17 108.6 13.7 117 189-343 23-149 (170)
98 3uwp_A Histone-lysine N-methyl 99.5 2E-13 6.8E-18 125.8 10.2 112 177-294 163-295 (438)
99 2gs9_A Hypothetical protein TT 99.5 2.7E-13 9.1E-18 115.9 10.3 128 189-334 36-171 (211)
100 3orh_A Guanidinoacetate N-meth 99.5 2.9E-14 9.8E-19 124.3 4.3 133 188-340 59-207 (236)
101 2vdw_A Vaccinia virus capping 99.5 1.1E-12 3.9E-17 118.3 14.8 153 189-343 48-246 (302)
102 2b3t_A Protein methyltransfera 99.4 2.1E-12 7.3E-17 115.1 16.2 134 189-354 109-275 (276)
103 4df3_A Fibrillarin-like rRNA/T 99.4 1.5E-12 5.2E-17 112.1 13.2 141 187-353 75-230 (233)
104 1af7_A Chemotaxis receptor met 99.4 3.1E-13 1E-17 119.9 9.1 96 189-285 105-250 (274)
105 1dus_A MJ0882; hypothetical pr 99.4 2.3E-12 7.7E-17 108.1 14.1 141 177-354 42-193 (194)
106 1nt2_A Fibrillarin-like PRE-rR 99.4 1.8E-12 6.2E-17 110.8 13.6 137 187-354 55-209 (210)
107 2ipx_A RRNA 2'-O-methyltransfe 99.4 7E-13 2.4E-17 115.2 10.5 141 187-353 75-230 (233)
108 3bgv_A MRNA CAP guanine-N7 met 99.4 1.2E-12 3.9E-17 119.0 12.2 154 188-343 33-232 (313)
109 3iv6_A Putative Zn-dependent a 99.4 1.6E-12 5.6E-17 114.2 12.2 107 176-288 34-149 (261)
110 4dzr_A Protein-(glutamine-N5) 99.4 2.7E-13 9.2E-18 115.8 6.4 135 188-353 29-203 (215)
111 1zx0_A Guanidinoacetate N-meth 99.4 2.6E-13 8.8E-18 118.2 6.0 100 188-289 59-172 (236)
112 3hm2_A Precorrin-6Y C5,15-meth 99.4 1.2E-12 4.3E-17 108.4 9.6 94 187-288 23-128 (178)
113 3htx_A HEN1; HEN1, small RNA m 99.4 1.2E-12 4.1E-17 129.3 10.9 99 188-288 720-835 (950)
114 2pxx_A Uncharacterized protein 99.4 8.6E-13 2.9E-17 112.7 8.4 100 188-289 41-161 (215)
115 1g8a_A Fibrillarin-like PRE-rR 99.4 1.2E-11 4.3E-16 106.7 15.6 141 187-354 71-226 (227)
116 3fzg_A 16S rRNA methylase; met 99.4 6.5E-12 2.2E-16 103.6 12.4 95 188-287 48-152 (200)
117 3mti_A RRNA methylase; SAM-dep 99.3 6.2E-12 2.1E-16 105.0 11.8 133 187-344 20-170 (185)
118 3fpf_A Mtnas, putative unchara 99.3 3.6E-12 1.2E-16 113.2 10.7 95 187-287 120-222 (298)
119 3bwc_A Spermidine synthase; SA 99.3 4.9E-12 1.7E-16 114.3 11.5 129 188-343 94-240 (304)
120 2h00_A Methyltransferase 10 do 99.3 2.5E-13 8.5E-18 119.6 2.8 144 189-343 65-238 (254)
121 2nxc_A L11 mtase, ribosomal pr 99.3 7.4E-12 2.5E-16 110.2 12.1 127 188-353 119-253 (254)
122 3mb5_A SAM-dependent methyltra 99.3 5.3E-12 1.8E-16 111.1 11.2 127 177-343 83-222 (255)
123 4dcm_A Ribosomal RNA large sub 99.3 4.9E-12 1.7E-16 117.5 11.3 108 177-287 212-334 (375)
124 3id6_C Fibrillarin-like rRNA/T 99.3 3.6E-11 1.2E-15 103.8 15.7 141 187-353 74-229 (232)
125 3kr9_A SAM-dependent methyltra 99.3 3E-11 1E-15 103.4 14.8 129 188-353 14-156 (225)
126 1xdz_A Methyltransferase GIDB; 99.3 4.6E-12 1.6E-16 110.6 9.9 122 187-343 68-202 (240)
127 2pjd_A Ribosomal RNA small sub 99.3 2.2E-12 7.7E-17 118.6 8.3 109 177-288 186-304 (343)
128 3njr_A Precorrin-6Y methylase; 99.3 2E-11 7E-16 103.7 13.7 115 187-341 53-178 (204)
129 1yb2_A Hypothetical protein TA 99.3 5.3E-12 1.8E-16 112.5 10.4 125 178-342 101-236 (275)
130 3eey_A Putative rRNA methylase 99.3 5E-12 1.7E-16 106.7 9.6 102 187-289 20-141 (197)
131 3evz_A Methyltransferase; NYSG 99.3 2.8E-11 9.6E-16 104.6 13.8 128 187-345 53-208 (230)
132 3lpm_A Putative methyltransfer 99.3 2.7E-11 9.1E-16 106.9 13.7 124 187-343 46-201 (259)
133 3lec_A NADB-rossmann superfami 99.3 7.2E-11 2.5E-15 101.3 15.0 129 188-353 20-162 (230)
134 3duw_A OMT, O-methyltransferas 99.3 1.3E-11 4.4E-16 106.3 10.3 99 187-291 56-171 (223)
135 3tfw_A Putative O-methyltransf 99.3 1.1E-11 3.8E-16 108.7 10.0 98 187-290 61-173 (248)
136 3m33_A Uncharacterized protein 99.3 5.4E-12 1.8E-16 109.0 7.6 114 188-343 47-167 (226)
137 3g89_A Ribosomal RNA small sub 99.3 6.9E-12 2.3E-16 110.0 8.3 122 187-343 78-212 (249)
138 2y1w_A Histone-arginine methyl 99.3 9.9E-12 3.4E-16 114.5 9.8 106 177-286 40-154 (348)
139 1l3i_A Precorrin-6Y methyltran 99.3 2.8E-11 9.7E-16 101.1 11.6 113 187-337 31-154 (192)
140 1u2z_A Histone-lysine N-methyl 99.3 2E-11 6.8E-16 114.6 11.5 110 178-293 233-365 (433)
141 2ld4_A Anamorsin; methyltransf 99.3 1.4E-11 4.9E-16 102.0 9.3 114 187-342 10-133 (176)
142 1yzh_A TRNA (guanine-N(7)-)-me 99.3 3.3E-11 1.1E-15 103.1 11.8 97 189-287 41-156 (214)
143 3hp7_A Hemolysin, putative; st 99.3 1.7E-11 5.8E-16 109.0 10.1 148 178-344 75-233 (291)
144 2fca_A TRNA (guanine-N(7)-)-me 99.3 2.5E-11 8.4E-16 103.9 10.8 97 189-287 38-153 (213)
145 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1E-11 3.5E-16 106.7 7.7 97 189-287 34-150 (218)
146 1o9g_A RRNA methyltransferase; 99.2 2.7E-11 9.4E-16 106.2 10.3 100 188-288 50-215 (250)
147 2avn_A Ubiquinone/menaquinone 99.2 1.1E-11 3.6E-16 109.5 7.6 96 189-289 54-154 (260)
148 3gnl_A Uncharacterized protein 99.2 1.1E-10 3.6E-15 101.1 13.4 129 188-353 20-162 (244)
149 2pwy_A TRNA (adenine-N(1)-)-me 99.2 3.9E-11 1.3E-15 105.5 11.0 126 177-342 86-223 (258)
150 2frn_A Hypothetical protein PH 99.2 1E-10 3.5E-15 104.2 13.4 120 188-339 124-253 (278)
151 3lbf_A Protein-L-isoaspartate 99.2 4.1E-11 1.4E-15 102.1 10.3 98 178-288 68-175 (210)
152 1jsx_A Glucose-inhibited divis 99.2 1.4E-11 4.9E-16 104.7 7.5 91 189-286 65-164 (207)
153 2yxe_A Protein-L-isoaspartate 99.2 3.7E-11 1.3E-15 102.8 10.1 100 178-288 68-178 (215)
154 3b3j_A Histone-arginine methyl 99.2 2E-11 6.8E-16 116.8 8.8 106 176-285 147-261 (480)
155 3r3h_A O-methyltransferase, SA 99.2 4.4E-11 1.5E-15 104.5 9.6 99 188-292 59-175 (242)
156 2yxd_A Probable cobalt-precorr 99.2 1.2E-10 4E-15 96.6 11.7 113 187-340 33-154 (183)
157 1o54_A SAM-dependent O-methylt 99.2 6.8E-11 2.3E-15 105.4 10.7 101 177-287 102-213 (277)
158 3q7e_A Protein arginine N-meth 99.2 8.3E-11 2.9E-15 108.3 11.3 96 188-285 65-171 (349)
159 3p9n_A Possible methyltransfer 99.2 9.4E-11 3.2E-15 98.2 10.4 98 189-289 44-155 (189)
160 2ozv_A Hypothetical protein AT 99.2 6.4E-11 2.2E-15 104.6 9.8 99 187-286 34-169 (260)
161 3dmg_A Probable ribosomal RNA 99.2 9.5E-11 3.2E-15 108.9 11.1 96 189-287 233-340 (381)
162 2bm8_A Cephalosporin hydroxyla 99.2 9.6E-11 3.3E-15 101.9 10.2 94 189-288 81-188 (236)
163 3ntv_A MW1564 protein; rossman 99.2 4.2E-11 1.4E-15 103.9 7.6 97 188-290 70-179 (232)
164 1vbf_A 231AA long hypothetical 99.2 1.2E-10 4E-15 100.8 10.5 99 177-288 60-166 (231)
165 3ckk_A TRNA (guanine-N(7)-)-me 99.2 7.9E-11 2.7E-15 102.3 9.4 98 188-287 45-168 (235)
166 3u81_A Catechol O-methyltransf 99.2 4.6E-11 1.6E-15 102.8 7.8 98 188-289 57-172 (221)
167 3opn_A Putative hemolysin; str 99.2 1.5E-11 5.2E-16 106.6 4.6 139 189-344 37-185 (232)
168 1ej0_A FTSJ; methyltransferase 99.2 1.1E-10 3.9E-15 96.0 9.7 97 187-288 20-137 (180)
169 1nv8_A HEMK protein; class I a 99.2 9.1E-11 3.1E-15 104.9 9.7 94 189-285 123-247 (284)
170 3lcv_B Sisomicin-gentamicin re 99.2 4.7E-11 1.6E-15 103.0 7.2 135 188-345 131-273 (281)
171 1jg1_A PIMT;, protein-L-isoasp 99.2 8.5E-11 2.9E-15 102.1 8.8 100 177-288 81-190 (235)
172 3gjy_A Spermidine synthase; AP 99.1 8E-11 2.7E-15 105.9 8.7 97 191-288 91-201 (317)
173 3tr6_A O-methyltransferase; ce 99.1 5.4E-11 1.8E-15 102.5 7.2 98 188-291 63-178 (225)
174 2fyt_A Protein arginine N-meth 99.1 1.9E-10 6.4E-15 105.5 11.0 96 187-284 62-168 (340)
175 3r0q_C Probable protein argini 99.1 1.2E-10 4.1E-15 108.4 9.7 100 187-288 61-170 (376)
176 1dl5_A Protein-L-isoaspartate 99.1 1.6E-10 5.3E-15 105.1 10.2 101 177-288 65-176 (317)
177 2gpy_A O-methyltransferase; st 99.1 1.2E-10 4.2E-15 100.9 8.9 97 188-290 53-163 (233)
178 3dr5_A Putative O-methyltransf 99.1 1.7E-10 5.8E-15 99.2 9.6 95 190-290 57-166 (221)
179 1p91_A Ribosomal RNA large sub 99.1 1.4E-10 4.9E-15 102.7 9.4 92 188-289 84-180 (269)
180 2plw_A Ribosomal RNA methyltra 99.1 2.4E-10 8.2E-15 96.5 10.3 95 187-286 20-153 (201)
181 1g6q_1 HnRNP arginine N-methyl 99.1 3.7E-10 1.3E-14 103.1 11.3 96 188-285 37-143 (328)
182 3adn_A Spermidine synthase; am 99.1 1.6E-10 5.4E-15 103.7 8.6 99 188-287 82-198 (294)
183 2hnk_A SAM-dependent O-methylt 99.1 4.4E-10 1.5E-14 97.8 10.8 97 188-290 59-184 (239)
184 1ws6_A Methyltransferase; stru 99.1 9E-11 3.1E-15 96.3 5.8 93 189-288 41-148 (171)
185 2vdv_E TRNA (guanine-N(7)-)-me 99.1 1.9E-10 6.5E-15 100.6 7.8 94 187-286 47-172 (246)
186 1ixk_A Methyltransferase; open 99.1 4.9E-10 1.7E-14 101.6 10.8 102 187-289 116-248 (315)
187 3c3p_A Methyltransferase; NP_9 99.1 1.3E-10 4.3E-15 99.1 6.4 96 189-290 56-163 (210)
188 2avd_A Catechol-O-methyltransf 99.1 1.3E-10 4.5E-15 100.3 6.2 97 188-290 68-182 (229)
189 2fhp_A Methylase, putative; al 99.1 2.4E-10 8.1E-15 95.3 7.5 96 188-288 43-155 (187)
190 2esr_A Methyltransferase; stru 99.1 2.9E-10 1E-14 94.0 7.6 97 188-289 30-140 (177)
191 1sui_A Caffeoyl-COA O-methyltr 99.0 2.8E-10 9.5E-15 99.6 7.6 97 188-290 78-193 (247)
192 2pbf_A Protein-L-isoaspartate 99.0 9.4E-10 3.2E-14 94.8 10.7 93 187-288 78-194 (227)
193 2ift_A Putative methylase HI07 99.0 2.1E-10 7.1E-15 97.2 6.4 97 189-290 53-166 (201)
194 3sso_A Methyltransferase; macr 99.0 2.3E-10 7.8E-15 105.2 7.0 94 189-289 216-326 (419)
195 1r18_A Protein-L-isoaspartate( 99.0 3.7E-10 1.3E-14 97.4 8.1 92 187-287 82-194 (227)
196 1zq9_A Probable dimethyladenos 99.0 4.3E-10 1.5E-14 100.5 7.8 102 177-284 18-144 (285)
197 2oxt_A Nucleoside-2'-O-methylt 99.0 9.6E-10 3.3E-14 97.0 9.9 97 187-288 72-186 (265)
198 3frh_A 16S rRNA methylase; met 99.0 2E-09 6.8E-14 92.0 11.4 95 188-288 104-206 (253)
199 3tma_A Methyltransferase; thum 99.0 1.4E-09 4.9E-14 100.3 11.4 109 176-287 192-317 (354)
200 1i9g_A Hypothetical protein RV 99.0 8E-10 2.7E-14 98.4 9.4 102 177-288 89-204 (280)
201 2wa2_A Non-structural protein 99.0 9.1E-10 3.1E-14 97.7 9.5 97 187-288 80-194 (276)
202 3dou_A Ribosomal RNA large sub 99.0 1.5E-09 5.1E-14 91.1 10.2 102 178-287 15-139 (191)
203 2yvl_A TRMI protein, hypotheti 99.0 2.7E-09 9.3E-14 93.0 12.1 99 178-288 82-191 (248)
204 3gdh_A Trimethylguanosine synt 99.0 2.8E-11 9.6E-16 105.4 -0.7 135 189-346 78-222 (241)
205 1i1n_A Protein-L-isoaspartate 99.0 1.8E-09 6E-14 93.0 10.4 93 187-288 75-183 (226)
206 3c3y_A Pfomt, O-methyltransfer 99.0 6.5E-10 2.2E-14 96.6 7.6 96 188-289 69-183 (237)
207 2i7c_A Spermidine synthase; tr 99.0 6.9E-10 2.4E-14 99.1 7.6 98 188-286 77-191 (283)
208 3cbg_A O-methyltransferase; cy 99.0 4.3E-10 1.5E-14 97.5 6.0 97 189-291 72-186 (232)
209 2p41_A Type II methyltransfera 99.0 1.1E-09 3.7E-14 98.7 8.8 95 187-285 80-189 (305)
210 2fpo_A Methylase YHHF; structu 99.0 9.6E-10 3.3E-14 93.1 8.0 96 189-289 54-162 (202)
211 4hc4_A Protein arginine N-meth 99.0 3.1E-09 1.1E-13 98.0 11.9 95 189-285 83-187 (376)
212 1iy9_A Spermidine synthase; ro 99.0 6E-10 2E-14 99.1 6.9 97 189-286 75-188 (275)
213 2nyu_A Putative ribosomal RNA 99.0 1.8E-09 6.1E-14 90.7 9.4 97 187-288 20-146 (196)
214 1uir_A Polyamine aminopropyltr 99.0 9E-10 3.1E-14 99.8 7.7 98 189-287 77-195 (314)
215 1mjf_A Spermidine synthase; sp 99.0 7.9E-10 2.7E-14 98.6 7.1 96 189-286 75-192 (281)
216 3a27_A TYW2, uncharacterized p 99.0 1.1E-09 3.8E-14 97.2 7.9 99 187-292 117-224 (272)
217 1xj5_A Spermidine synthase 1; 99.0 9.2E-10 3.1E-14 100.4 7.2 98 188-286 119-234 (334)
218 2pt6_A Spermidine synthase; tr 98.9 1E-09 3.4E-14 99.7 7.4 97 189-286 116-229 (321)
219 2b2c_A Spermidine synthase; be 98.9 8.1E-10 2.8E-14 99.9 6.7 98 189-287 108-222 (314)
220 4azs_A Methyltransferase WBDD; 98.9 3.6E-10 1.2E-14 110.8 4.7 101 189-292 66-178 (569)
221 2o07_A Spermidine synthase; st 98.9 7.3E-10 2.5E-14 99.9 6.3 99 188-287 94-209 (304)
222 3bzb_A Uncharacterized protein 98.9 7.1E-09 2.4E-13 92.4 12.2 96 188-286 78-204 (281)
223 2b25_A Hypothetical protein; s 98.9 2.3E-09 8E-14 98.1 9.0 100 179-288 97-220 (336)
224 2yxl_A PH0851 protein, 450AA l 98.9 6.4E-09 2.2E-13 99.0 12.3 103 187-290 257-392 (450)
225 1inl_A Spermidine synthase; be 98.9 1.4E-09 4.7E-14 97.7 6.3 97 189-286 90-204 (296)
226 2cmg_A Spermidine synthase; tr 98.9 3.3E-09 1.1E-13 93.5 8.0 88 189-286 72-170 (262)
227 1ne2_A Hypothetical protein TA 98.9 5.4E-09 1.9E-13 88.1 9.1 88 188-276 50-139 (200)
228 3ajd_A Putative methyltransfer 98.9 3.3E-09 1.1E-13 94.2 7.9 103 187-290 81-214 (274)
229 3k6r_A Putative transferase PH 98.8 2.1E-08 7.1E-13 88.7 11.4 120 187-338 123-252 (278)
230 2h1r_A Dimethyladenosine trans 98.8 5.6E-09 1.9E-13 93.9 7.7 99 177-281 32-153 (299)
231 2f8l_A Hypothetical protein LM 98.8 6.7E-09 2.3E-13 95.4 8.1 98 189-287 130-256 (344)
232 2ih2_A Modification methylase 98.8 1.6E-08 5.6E-13 95.3 10.9 97 188-288 38-165 (421)
233 1wy7_A Hypothetical protein PH 98.8 5.2E-08 1.8E-12 82.4 12.5 88 188-276 48-141 (207)
234 1qam_A ERMC' methyltransferase 98.8 1.8E-08 6.2E-13 87.8 9.8 103 176-283 19-142 (244)
235 2igt_A SAM dependent methyltra 98.8 1.8E-08 6.3E-13 91.8 9.1 97 189-288 153-273 (332)
236 1yub_A Ermam, rRNA methyltrans 98.7 6.1E-09 2.1E-13 90.9 4.9 104 177-287 19-145 (245)
237 2xyq_A Putative 2'-O-methyl tr 98.7 2.9E-08 9.9E-13 88.3 9.2 116 187-341 61-195 (290)
238 3tm4_A TRNA (guanine N2-)-meth 98.7 3.7E-08 1.3E-12 91.4 10.1 120 188-343 216-352 (373)
239 1sqg_A SUN protein, FMU protei 98.7 2.2E-08 7.5E-13 94.7 8.6 103 187-290 244-377 (429)
240 3m6w_A RRNA methylase; rRNA me 98.7 1.7E-08 5.9E-13 95.5 7.1 101 187-288 99-230 (464)
241 2frx_A Hypothetical protein YE 98.7 8.7E-08 3E-12 91.5 11.1 101 189-290 117-249 (479)
242 3m4x_A NOL1/NOP2/SUN family pr 98.7 3.8E-08 1.3E-12 93.1 7.7 103 187-290 103-237 (456)
243 3gru_A Dimethyladenosine trans 98.6 1.5E-07 5.1E-12 84.1 9.7 89 176-269 39-135 (295)
244 2yx1_A Hypothetical protein MJ 98.6 7.9E-08 2.7E-12 87.8 8.0 92 188-289 194-293 (336)
245 3b5i_A S-adenosyl-L-methionine 98.6 1.2E-06 4E-11 80.6 15.3 152 189-343 52-298 (374)
246 1wxx_A TT1595, hypothetical pr 98.6 7.8E-08 2.7E-12 89.5 7.6 97 189-288 209-326 (382)
247 2as0_A Hypothetical protein PH 98.6 7.8E-08 2.7E-12 90.0 7.4 98 189-288 217-336 (396)
248 2okc_A Type I restriction enzy 98.5 9.1E-08 3.1E-12 90.9 6.7 100 188-288 170-308 (445)
249 3k0b_A Predicted N6-adenine-sp 98.5 2.9E-07 9.8E-12 85.8 9.9 111 176-288 190-351 (393)
250 2b78_A Hypothetical protein SM 98.5 8E-08 2.7E-12 89.5 6.0 97 189-287 212-331 (385)
251 4dmg_A Putative uncharacterize 98.5 1.6E-07 5.6E-12 87.4 8.1 97 189-288 214-327 (393)
252 3ldg_A Putative uncharacterize 98.5 9E-07 3.1E-11 82.1 12.2 111 176-288 183-344 (384)
253 3c0k_A UPF0064 protein YCCW; P 98.5 1.9E-07 6.5E-12 87.3 7.5 97 189-287 220-339 (396)
254 3ldu_A Putative methylase; str 98.5 4.7E-07 1.6E-11 84.1 10.1 111 176-288 184-345 (385)
255 4gqb_A Protein arginine N-meth 98.5 2.6E-07 8.9E-12 90.2 7.6 128 149-284 322-464 (637)
256 2qfm_A Spermine synthase; sper 98.4 3.5E-07 1.2E-11 83.2 7.5 97 188-286 187-313 (364)
257 3fut_A Dimethyladenosine trans 98.4 6.4E-07 2.2E-11 79.0 8.9 89 177-271 37-133 (271)
258 3ftd_A Dimethyladenosine trans 98.4 6.5E-07 2.2E-11 78.1 8.4 90 177-269 21-116 (249)
259 2efj_A 3,7-dimethylxanthine me 98.4 2.3E-06 8E-11 78.7 12.4 151 190-342 53-291 (384)
260 1m6y_A S-adenosyl-methyltransf 98.4 4.5E-07 1.5E-11 81.2 6.8 77 177-255 16-106 (301)
261 1uwv_A 23S rRNA (uracil-5-)-me 98.4 1.3E-06 4.4E-11 82.6 10.0 90 187-285 284-387 (433)
262 1rjd_A PPM1P, carboxy methyl t 98.4 6.2E-06 2.1E-10 74.9 13.8 144 188-336 96-281 (334)
263 3v97_A Ribosomal RNA large sub 98.4 9.4E-07 3.2E-11 88.3 9.2 97 189-287 539-657 (703)
264 3tqs_A Ribosomal RNA small sub 98.3 5.1E-07 1.7E-11 79.0 5.9 87 177-269 19-117 (255)
265 3uzu_A Ribosomal RNA small sub 98.3 3.1E-07 1E-11 81.5 4.2 84 177-262 32-128 (279)
266 3o4f_A Spermidine synthase; am 98.3 1.4E-06 4.7E-11 77.2 8.3 98 188-286 82-197 (294)
267 2jjq_A Uncharacterized RNA met 98.3 3.3E-06 1.1E-10 79.4 11.2 89 189-286 290-386 (425)
268 3evf_A RNA-directed RNA polyme 98.3 2.3E-06 7.8E-11 74.3 9.1 106 177-285 64-182 (277)
269 1m6e_X S-adenosyl-L-methionnin 98.3 1.6E-05 5.6E-10 72.5 14.1 151 188-340 50-277 (359)
270 3ua3_A Protein arginine N-meth 98.3 2.2E-06 7.7E-11 83.7 8.8 127 149-284 377-531 (745)
271 1qyr_A KSGA, high level kasuga 98.2 1.3E-06 4.4E-11 76.3 5.5 89 177-269 11-111 (252)
272 3bt7_A TRNA (uracil-5-)-methyl 98.1 2.1E-06 7.2E-11 79.4 4.9 87 190-287 214-326 (369)
273 3gcz_A Polyprotein; flavivirus 98.1 4.4E-06 1.5E-10 72.7 6.4 107 176-285 79-199 (282)
274 2r6z_A UPF0341 protein in RSP 98.1 7.4E-06 2.5E-10 71.7 7.8 71 187-259 81-173 (258)
275 3v97_A Ribosomal RNA large sub 98.1 1.4E-05 4.8E-10 79.9 10.4 110 176-288 179-348 (703)
276 2k4m_A TR8_protein, UPF0146 pr 98.0 9.1E-06 3.1E-10 63.5 5.9 83 188-288 34-122 (153)
277 2dul_A N(2),N(2)-dimethylguano 98.0 6.9E-06 2.4E-10 75.9 6.3 92 189-287 47-164 (378)
278 2qy6_A UPF0209 protein YFCK; s 98.0 9.8E-06 3.4E-10 70.8 6.9 96 189-285 60-211 (257)
279 2ar0_A M.ecoki, type I restric 98.0 1.6E-05 5.4E-10 77.1 8.5 99 188-287 168-312 (541)
280 2b9e_A NOL1/NOP2/SUN domain fa 98.0 2.8E-05 9.5E-10 69.9 9.5 67 187-253 100-180 (309)
281 3axs_A Probable N(2),N(2)-dime 97.9 1.1E-05 3.6E-10 74.9 6.2 92 189-287 52-158 (392)
282 4auk_A Ribosomal RNA large sub 97.8 0.00014 4.7E-09 66.2 10.9 92 187-284 209-303 (375)
283 3s1s_A Restriction endonucleas 97.8 9.6E-05 3.3E-09 73.5 10.1 99 188-287 320-465 (878)
284 3eld_A Methyltransferase; flav 97.8 6.4E-05 2.2E-09 65.8 7.7 99 187-286 79-190 (300)
285 3khk_A Type I restriction-modi 97.7 2.9E-05 9.8E-10 75.2 5.7 96 191-287 246-395 (544)
286 3iei_A Leucine carboxyl methyl 97.7 0.00058 2E-08 61.7 13.5 146 189-344 90-282 (334)
287 3c6k_A Spermine synthase; sper 97.7 0.0001 3.5E-09 67.3 7.9 97 188-286 204-330 (381)
288 2oyr_A UPF0341 protein YHIQ; a 97.6 7.9E-05 2.7E-09 65.0 6.7 71 187-259 84-176 (258)
289 2vz8_A Fatty acid synthase; tr 97.6 1.6E-05 5.3E-10 89.7 2.7 142 189-342 1240-1394(2512)
290 2heo_A Z-DNA binding protein 1 97.6 3.1E-05 1E-09 52.6 3.0 55 39-97 12-66 (67)
291 1y0u_A Arsenical resistance op 97.5 9.9E-05 3.4E-09 54.0 5.2 63 31-101 25-87 (96)
292 2px2_A Genome polyprotein [con 97.5 0.00041 1.4E-08 59.4 9.5 107 176-285 62-181 (269)
293 2uyo_A Hypothetical protein ML 97.5 0.00087 3E-08 60.1 11.9 146 189-342 102-277 (310)
294 3lkd_A Type I restriction-modi 97.5 0.00047 1.6E-08 66.6 10.7 98 189-287 221-358 (542)
295 3ll7_A Putative methyltransfer 97.5 5.7E-05 1.9E-09 70.2 3.9 64 189-254 93-170 (410)
296 3cvo_A Methyltransferase-like 97.5 0.00059 2E-08 57.0 9.6 89 188-288 29-154 (202)
297 1wg8_A Predicted S-adenosylmet 97.5 0.00021 7.2E-09 62.5 6.9 75 176-254 11-96 (285)
298 3p8z_A Mtase, non-structural p 97.4 0.00053 1.8E-08 57.8 8.3 106 176-285 67-184 (267)
299 3b73_A PHIH1 repressor-like pr 97.4 9.1E-05 3.1E-09 55.6 3.4 62 39-105 15-79 (111)
300 3lkz_A Non-structural protein 97.3 0.0012 4.1E-08 57.6 9.8 106 176-285 83-202 (321)
301 3pqk_A Biofilm growth-associat 97.2 0.00033 1.1E-08 51.8 4.7 66 31-99 17-82 (102)
302 1xmk_A Double-stranded RNA-spe 97.2 0.00024 8.3E-09 49.5 3.2 61 38-101 12-73 (79)
303 3jth_A Transcription activator 97.1 0.00028 9.5E-09 51.7 3.2 66 31-99 17-82 (98)
304 3mq0_A Transcriptional repress 97.1 0.00036 1.2E-08 61.5 4.0 57 40-100 33-89 (275)
305 3f6o_A Probable transcriptiona 97.0 0.00029 1E-08 53.6 2.8 67 31-100 12-78 (118)
306 1u2w_A CADC repressor, cadmium 97.0 0.0005 1.7E-08 52.7 4.0 67 31-99 36-102 (122)
307 2oqg_A Possible transcriptiona 97.0 0.00034 1.2E-08 52.7 3.0 64 34-100 18-81 (114)
308 1oyi_A Double-stranded RNA-bin 96.9 0.00077 2.6E-08 47.1 3.9 60 37-100 17-76 (82)
309 1qbj_A Protein (double-strande 96.9 0.0013 4.4E-08 46.2 4.9 62 38-102 11-75 (81)
310 1r1u_A CZRA, repressor protein 96.9 0.0005 1.7E-08 51.2 3.0 64 33-99 22-85 (106)
311 1qgp_A Protein (double strande 96.9 0.00086 3E-08 46.7 3.9 57 39-98 16-75 (77)
312 3cuo_A Uncharacterized HTH-typ 96.8 0.0006 2E-08 49.8 3.0 66 33-100 20-85 (99)
313 2fu4_A Ferric uptake regulatio 96.8 0.00066 2.2E-08 48.0 3.1 49 38-86 18-72 (83)
314 2kko_A Possible transcriptiona 96.8 0.00032 1.1E-08 52.5 1.5 64 33-99 21-84 (108)
315 2jsc_A Transcriptional regulat 96.8 0.00055 1.9E-08 52.1 2.8 66 31-99 15-80 (118)
316 3df8_A Possible HXLR family tr 96.8 0.00058 2E-08 51.3 2.9 76 17-105 16-94 (111)
317 2zwa_A Leucine carboxyl methyl 96.8 0.032 1.1E-06 55.7 16.4 147 189-343 107-309 (695)
318 3f6v_A Possible transcriptiona 96.8 0.00057 2E-08 54.4 2.8 68 30-100 51-118 (151)
319 2hzt_A Putative HTH-type trans 96.8 0.0014 4.8E-08 48.8 4.8 75 19-104 5-82 (107)
320 3ech_A MEXR, multidrug resista 96.8 0.0025 8.7E-08 49.7 6.4 67 37-104 37-105 (142)
321 3r4k_A Transcriptional regulat 96.8 0.00055 1.9E-08 59.8 2.6 58 40-100 9-66 (260)
322 1r7j_A Conserved hypothetical 96.8 0.0012 4E-08 48.1 3.9 55 42-104 13-67 (95)
323 2xrn_A HTH-type transcriptiona 96.7 0.00094 3.2E-08 57.6 3.6 59 40-101 9-67 (241)
324 2wk1_A NOVP; transferase, O-me 96.7 0.0026 8.8E-08 56.0 6.5 92 189-285 106-242 (282)
325 2jt1_A PEFI protein; solution 96.7 0.00097 3.3E-08 46.3 2.9 45 42-86 9-58 (77)
326 1mkm_A ICLR transcriptional re 96.6 0.0014 4.8E-08 56.8 4.3 57 40-100 11-67 (249)
327 4a5n_A Uncharacterized HTH-typ 96.6 0.0023 7.8E-08 49.5 4.7 78 17-105 15-95 (131)
328 2g7u_A Transcriptional regulat 96.6 0.0013 4.5E-08 57.3 3.7 60 40-104 17-76 (257)
329 3tka_A Ribosomal RNA small sub 96.6 0.0045 1.5E-07 55.4 7.2 78 175-254 45-135 (347)
330 2htj_A P fimbrial regulatory p 96.5 0.0027 9.2E-08 44.6 4.4 45 40-85 3-47 (81)
331 1r1t_A Transcriptional repress 96.5 0.0018 6.2E-08 49.5 3.7 64 33-99 42-105 (122)
332 2o0y_A Transcriptional regulat 96.5 0.0016 5.5E-08 56.8 3.6 57 40-100 26-82 (260)
333 4fzv_A Putative methyltransfer 96.5 0.0085 2.9E-07 54.6 8.4 104 187-291 146-288 (359)
334 2ia2_A Putative transcriptiona 96.4 0.0017 5.9E-08 56.8 3.3 56 40-100 24-79 (265)
335 1xn7_A Hypothetical protein YH 96.4 0.0029 1E-07 44.0 3.7 43 42-85 7-49 (78)
336 1ub9_A Hypothetical protein PH 96.4 0.0015 5E-08 47.7 2.3 69 32-101 11-81 (100)
337 1yyv_A Putative transcriptiona 96.4 0.0021 7.2E-08 49.8 3.3 76 18-104 25-103 (131)
338 1on2_A Transcriptional regulat 96.3 0.0025 8.7E-08 49.9 3.7 50 51-104 21-70 (142)
339 1z7u_A Hypothetical protein EF 96.3 0.0025 8.4E-08 47.9 3.4 76 18-104 12-90 (112)
340 2wte_A CSA3; antiviral protein 96.3 0.0022 7.4E-08 55.3 3.4 63 38-104 153-215 (244)
341 2k02_A Ferrous iron transport 96.3 0.0027 9.3E-08 45.0 3.1 44 42-86 7-50 (87)
342 3bja_A Transcriptional regulat 96.2 0.0034 1.2E-07 48.6 3.9 66 38-104 34-101 (139)
343 1tbx_A ORF F-93, hypothetical 96.2 0.0026 8.8E-08 46.5 2.9 64 39-104 10-77 (99)
344 3bdd_A Regulatory protein MARR 96.2 0.0066 2.2E-07 47.1 5.5 66 38-104 32-99 (142)
345 3r24_A NSP16, 2'-O-methyl tran 96.2 0.011 3.8E-07 51.6 7.0 91 187-285 107-215 (344)
346 2fsw_A PG_0823 protein; alpha- 96.2 0.0028 9.6E-08 47.1 3.0 77 17-104 14-93 (107)
347 3k0l_A Repressor protein; heli 96.2 0.03 1E-06 44.6 9.4 66 38-104 47-114 (162)
348 3ufb_A Type I restriction-modi 96.1 0.026 8.8E-07 54.4 10.3 109 176-287 206-362 (530)
349 3nrv_A Putative transcriptiona 96.1 0.0042 1.4E-07 48.8 3.9 66 38-104 41-108 (148)
350 3fm5_A Transcriptional regulat 96.1 0.0033 1.1E-07 49.6 3.2 66 38-104 40-108 (150)
351 2y75_A HTH-type transcriptiona 96.1 0.008 2.7E-07 46.2 5.3 47 51-99 25-71 (129)
352 2f2e_A PA1607; transcription f 96.1 0.0036 1.2E-07 49.4 3.3 75 19-104 15-90 (146)
353 2qww_A Transcriptional regulat 96.0 0.011 3.9E-07 46.5 5.9 66 38-104 42-111 (154)
354 2zkz_A Transcriptional repress 95.9 0.0037 1.3E-07 45.7 2.6 64 33-99 23-86 (99)
355 2x4h_A Hypothetical protein SS 95.9 0.0054 1.8E-07 47.7 3.7 48 51-103 30-77 (139)
356 3deu_A Transcriptional regulat 95.9 0.01 3.4E-07 47.8 5.3 68 38-105 54-123 (166)
357 2nnn_A Probable transcriptiona 95.9 0.005 1.7E-07 47.7 3.4 65 38-104 39-106 (140)
358 2lkp_A Transcriptional regulat 95.9 0.011 3.9E-07 44.5 5.3 52 33-86 28-79 (119)
359 3bro_A Transcriptional regulat 95.9 0.0073 2.5E-07 46.8 4.3 67 38-104 35-104 (141)
360 3bpv_A Transcriptional regulat 95.8 0.0064 2.2E-07 47.0 3.8 65 38-104 30-97 (138)
361 3oop_A LIN2960 protein; protei 95.8 0.0056 1.9E-07 47.7 3.4 66 38-104 38-105 (143)
362 2gxg_A 146AA long hypothetical 95.8 0.037 1.3E-06 43.0 8.1 65 38-104 38-104 (146)
363 1bja_A Transcription regulator 95.8 0.0066 2.3E-07 43.7 3.3 62 38-105 17-79 (95)
364 1ylf_A RRF2 family protein; st 95.8 0.0097 3.3E-07 47.1 4.7 61 31-99 14-74 (149)
365 2lnb_A Z-DNA-binding protein 1 95.8 0.0065 2.2E-07 41.2 3.0 56 38-97 20-75 (80)
366 2fbh_A Transcriptional regulat 95.8 0.0095 3.2E-07 46.4 4.6 65 39-104 39-106 (146)
367 2obp_A Putative DNA-binding pr 95.8 0.008 2.7E-07 43.5 3.7 52 51-102 35-86 (96)
368 3boq_A Transcriptional regulat 95.7 0.008 2.7E-07 47.8 4.1 67 38-104 48-116 (160)
369 3kp7_A Transcriptional regulat 95.7 0.032 1.1E-06 43.8 7.6 64 39-104 40-107 (151)
370 3g3z_A NMB1585, transcriptiona 95.7 0.0073 2.5E-07 47.2 3.7 66 38-104 32-99 (145)
371 3bj6_A Transcriptional regulat 95.7 0.0074 2.5E-07 47.5 3.6 66 38-104 41-108 (152)
372 3r0a_A Putative transcriptiona 95.7 0.0055 1.9E-07 46.8 2.7 49 38-86 27-76 (123)
373 3eco_A MEPR; mutlidrug efflux 95.7 0.008 2.7E-07 46.6 3.7 67 38-104 32-101 (139)
374 1i4w_A Mitochondrial replicati 95.7 0.016 5.5E-07 52.6 6.1 83 189-271 58-165 (353)
375 2pg4_A Uncharacterized protein 95.6 0.0045 1.5E-07 44.8 2.0 63 42-104 20-83 (95)
376 2hr3_A Probable transcriptiona 95.6 0.0095 3.3E-07 46.6 4.0 67 37-104 35-104 (147)
377 4aik_A Transcriptional regulat 95.6 0.018 6E-07 45.6 5.5 66 39-105 33-101 (151)
378 1lj9_A Transcriptional regulat 95.6 0.0079 2.7E-07 46.9 3.4 65 39-104 31-97 (144)
379 1s3j_A YUSO protein; structura 95.6 0.021 7.1E-07 45.0 6.0 65 39-104 39-105 (155)
380 1jgs_A Multiple antibiotic res 95.6 0.0071 2.4E-07 46.7 3.1 66 38-104 35-102 (138)
381 3e6m_A MARR family transcripti 95.6 0.023 8E-07 45.2 6.3 66 38-104 54-121 (161)
382 3f3x_A Transcriptional regulat 95.6 0.014 4.9E-07 45.4 4.8 64 38-104 38-104 (144)
383 3u1d_A Uncharacterized protein 95.5 0.057 2E-06 42.4 8.1 85 38-134 30-124 (151)
384 3lwf_A LIN1550 protein, putati 95.5 0.014 4.7E-07 46.7 4.7 62 32-99 28-89 (159)
385 2bv6_A MGRA, HTH-type transcri 95.5 0.0073 2.5E-07 47.0 3.0 66 38-104 38-105 (142)
386 3s2w_A Transcriptional regulat 95.5 0.038 1.3E-06 43.8 7.3 64 40-104 53-118 (159)
387 3u2r_A Regulatory protein MARR 95.5 0.024 8.2E-07 45.5 6.1 67 38-105 47-117 (168)
388 2qvo_A Uncharacterized protein 95.5 0.0064 2.2E-07 44.0 2.3 49 52-104 30-81 (95)
389 2fa5_A Transcriptional regulat 95.5 0.01 3.5E-07 47.3 3.8 66 38-104 50-117 (162)
390 2rdp_A Putative transcriptiona 95.5 0.0099 3.4E-07 46.6 3.7 66 38-104 43-110 (150)
391 3cjn_A Transcriptional regulat 95.5 0.0091 3.1E-07 47.6 3.5 66 38-104 53-120 (162)
392 3vyw_A MNMC2; tRNA wobble urid 95.5 0.091 3.1E-06 46.5 10.1 122 189-345 96-250 (308)
393 2a61_A Transcriptional regulat 95.4 0.0076 2.6E-07 47.0 2.8 65 38-104 34-101 (145)
394 3cdh_A Transcriptional regulat 95.4 0.011 3.6E-07 46.8 3.5 66 38-104 44-111 (155)
395 2h09_A Transcriptional regulat 95.3 0.012 4.1E-07 46.7 3.8 55 45-104 48-102 (155)
396 3hsr_A HTH-type transcriptiona 95.3 0.0068 2.3E-07 47.2 2.2 66 38-104 37-104 (140)
397 2eth_A Transcriptional regulat 95.3 0.014 4.8E-07 46.1 4.1 66 38-104 45-112 (154)
398 3k69_A Putative transcription 95.3 0.022 7.4E-07 45.7 5.2 61 32-99 13-73 (162)
399 2qlz_A Transcription factor PF 95.3 0.0048 1.6E-07 52.6 1.3 69 31-101 6-79 (232)
400 3t8r_A Staphylococcus aureus C 95.3 0.017 5.8E-07 45.3 4.4 47 51-99 27-73 (143)
401 3jw4_A Transcriptional regulat 95.3 0.011 3.7E-07 46.4 3.3 67 38-104 42-111 (148)
402 2pex_A Transcriptional regulat 95.3 0.01 3.6E-07 46.7 3.1 67 38-105 48-116 (153)
403 2nyx_A Probable transcriptiona 95.3 0.0087 3E-07 48.2 2.7 66 38-104 46-113 (168)
404 3tgn_A ADC operon repressor AD 95.2 0.019 6.6E-07 44.7 4.6 66 37-104 38-105 (146)
405 3nqo_A MARR-family transcripti 95.2 0.037 1.3E-06 45.5 6.5 70 36-105 40-112 (189)
406 1z91_A Organic hydroperoxide r 95.2 0.017 5.9E-07 45.0 4.2 67 38-105 41-109 (147)
407 2o03_A Probable zinc uptake re 95.2 0.02 6.9E-07 44.1 4.4 61 36-96 10-75 (131)
408 4hbl_A Transcriptional regulat 95.1 0.0096 3.3E-07 46.8 2.4 66 38-104 42-109 (149)
409 2p4w_A Transcriptional regulat 95.1 0.018 6.2E-07 48.0 4.2 68 31-100 9-80 (202)
410 1sfx_A Conserved hypothetical 95.1 0.012 4.2E-07 43.2 2.9 48 38-86 21-68 (109)
411 3hrs_A Metalloregulator SCAR; 95.1 0.016 5.5E-07 48.8 3.9 51 51-105 19-69 (214)
412 2fbi_A Probable transcriptiona 95.1 0.0083 2.9E-07 46.5 1.9 65 38-104 37-104 (142)
413 2fe3_A Peroxide operon regulat 95.0 0.024 8.2E-07 44.5 4.6 62 36-97 21-87 (145)
414 2fbk_A Transcriptional regulat 94.8 0.013 4.4E-07 47.8 2.6 67 38-104 70-140 (181)
415 1xd7_A YWNA; structural genomi 94.8 0.035 1.2E-06 43.5 5.0 60 30-99 8-67 (145)
416 2xvc_A ESCRT-III, SSO0910; cel 94.8 0.018 6.1E-07 36.5 2.4 47 39-85 12-58 (59)
417 2zig_A TTHA0409, putative modi 94.6 0.026 9E-07 50.0 4.2 40 189-230 235-275 (297)
418 1uly_A Hypothetical protein PH 94.6 0.03 1E-06 46.2 4.2 53 31-85 14-66 (192)
419 1ku9_A Hypothetical protein MJ 94.6 0.025 8.5E-07 44.1 3.6 59 40-98 29-87 (152)
420 1q1h_A TFE, transcription fact 94.5 0.018 6.3E-07 42.7 2.5 47 39-85 20-66 (110)
421 4g6q_A Putative uncharacterize 94.5 0.013 4.5E-07 48.0 1.8 69 32-102 18-91 (182)
422 1mzb_A Ferric uptake regulatio 94.4 0.038 1.3E-06 42.8 4.3 61 37-97 18-84 (136)
423 3mwm_A ZUR, putative metal upt 94.3 0.041 1.4E-06 42.8 4.3 62 36-97 13-79 (139)
424 2frh_A SARA, staphylococcal ac 94.3 0.019 6.6E-07 43.8 2.4 67 38-104 38-107 (127)
425 2fxa_A Protease production reg 94.3 0.017 5.9E-07 48.3 2.2 66 38-104 49-116 (207)
426 1okr_A MECI, methicillin resis 94.1 0.013 4.5E-07 44.4 1.1 61 40-104 13-80 (123)
427 2w25_A Probable transcriptiona 94.1 0.035 1.2E-06 43.7 3.6 48 38-86 8-55 (150)
428 2pn6_A ST1022, 150AA long hypo 94.1 0.03 1E-06 44.1 3.1 48 38-86 4-51 (150)
429 2cfx_A HTH-type transcriptiona 94.1 0.036 1.2E-06 43.3 3.6 47 39-86 7-53 (144)
430 4fx0_A Probable transcriptiona 94.1 0.021 7.2E-07 44.9 2.2 65 39-103 35-104 (148)
431 2xig_A Ferric uptake regulatio 94.1 0.05 1.7E-06 43.0 4.3 62 36-97 26-92 (150)
432 1p6r_A Penicillinase repressor 94.0 0.024 8.1E-07 39.6 2.1 48 38-86 10-61 (82)
433 2k4b_A Transcriptional regulat 93.9 0.023 7.8E-07 41.4 1.8 48 38-86 36-87 (99)
434 2p5v_A Transcriptional regulat 93.8 0.044 1.5E-06 43.8 3.6 48 38-86 11-58 (162)
435 1j5y_A Transcriptional regulat 93.8 0.075 2.6E-06 43.6 5.1 58 37-99 21-79 (187)
436 2esh_A Conserved hypothetical 93.7 0.11 3.6E-06 39.2 5.5 69 33-103 9-89 (118)
437 2d1h_A ST1889, 109AA long hypo 93.7 0.028 9.6E-07 41.2 2.2 36 51-86 35-70 (109)
438 3i71_A Ethanolamine utilizatio 93.7 0.13 4.3E-06 32.6 4.7 51 44-99 10-60 (68)
439 2cg4_A Regulatory protein ASNC 93.6 0.046 1.6E-06 43.2 3.3 47 39-86 10-56 (152)
440 2dbb_A Putative HTH-type trans 93.5 0.052 1.8E-06 42.8 3.5 48 38-86 10-57 (151)
441 1sfu_A 34L protein; protein/Z- 93.3 0.11 3.8E-06 35.3 4.3 52 43-97 21-72 (75)
442 2cyy_A Putative HTH-type trans 93.3 0.044 1.5E-06 43.2 2.8 48 38-86 8-55 (151)
443 2ia0_A Putative HTH-type trans 93.3 0.06 2.1E-06 43.5 3.6 48 38-86 18-65 (171)
444 4b8x_A SCO5413, possible MARR- 93.2 0.035 1.2E-06 43.6 2.1 64 40-104 38-105 (147)
445 3i4p_A Transcriptional regulat 93.2 0.054 1.8E-06 43.3 3.2 48 38-86 4-51 (162)
446 1i1g_A Transcriptional regulat 93.1 0.053 1.8E-06 42.0 2.9 47 39-86 6-52 (141)
447 3k2z_A LEXA repressor; winged 93.0 0.051 1.7E-06 45.0 2.8 37 50-86 22-58 (196)
448 2e1c_A Putative HTH-type trans 93.0 0.058 2E-06 43.6 3.1 48 38-86 28-75 (171)
449 4esf_A PADR-like transcription 92.7 0.22 7.5E-06 37.3 5.8 69 32-102 6-84 (117)
450 1g55_A DNA cytosine methyltran 92.6 0.62 2.1E-05 42.0 9.8 122 190-339 2-145 (343)
451 1v4r_A Transcriptional repress 92.6 0.14 4.9E-06 37.2 4.5 53 33-86 15-69 (102)
452 3cta_A Riboflavin kinase; stru 92.6 0.058 2E-06 45.8 2.7 54 51-105 26-79 (230)
453 3g7u_A Cytosine-specific methy 92.5 1 3.4E-05 41.2 11.0 96 191-291 3-122 (376)
454 1p4x_A Staphylococcal accessor 92.3 0.074 2.5E-06 45.9 3.0 67 38-104 159-228 (250)
455 2w57_A Ferric uptake regulatio 92.2 0.065 2.2E-06 42.3 2.3 60 37-96 17-82 (150)
456 1fx7_A Iron-dependent represso 91.9 0.066 2.3E-06 45.5 2.2 48 53-104 25-72 (230)
457 2vn2_A DNAD, chromosome replic 91.9 0.1 3.5E-06 39.9 3.1 35 52-86 51-85 (128)
458 3f8b_A Transcriptional regulat 91.5 0.23 7.9E-06 37.1 4.6 69 32-102 7-87 (116)
459 2dk5_A DNA-directed RNA polyme 91.5 0.12 4.1E-06 36.9 2.9 47 40-86 23-70 (91)
460 2c7p_A Modification methylase 91.4 1.5 5.2E-05 39.1 10.7 120 190-339 11-149 (327)
461 2p8t_A Hypothetical protein PH 91.2 0.15 5E-06 42.1 3.4 49 51-104 29-77 (200)
462 2g9w_A Conserved hypothetical 90.5 0.15 5E-06 39.5 2.8 49 38-86 10-62 (138)
463 3elk_A Putative transcriptiona 90.5 0.24 8.1E-06 37.2 3.8 73 31-105 8-91 (117)
464 2qq9_A Diphtheria toxin repres 90.5 0.18 6.3E-06 42.6 3.6 50 52-105 24-73 (226)
465 1cf7_A Protein (transcription 90.5 0.19 6.6E-06 34.4 3.0 36 51-86 29-65 (76)
466 3iht_A S-adenosyl-L-methionine 90.2 1.6 5.4E-05 34.2 8.2 55 189-243 40-94 (174)
467 2o0m_A Transcriptional regulat 90.2 0.054 1.8E-06 49.1 0.0 62 38-105 21-82 (345)
468 2pjp_A Selenocysteine-specific 90.1 0.21 7.3E-06 37.6 3.3 55 38-98 8-62 (121)
469 3hhh_A Transcriptional regulat 90.0 0.43 1.5E-05 35.7 4.9 69 32-102 8-86 (116)
470 3eyy_A Putative iron uptake re 89.7 0.18 6.1E-06 39.5 2.7 60 37-97 19-83 (145)
471 1xma_A Predicted transcription 89.6 0.15 5.1E-06 39.9 2.1 68 34-103 38-117 (145)
472 2v79_A DNA replication protein 89.4 0.2 6.8E-06 38.7 2.7 35 51-85 50-84 (135)
473 1sd4_A Penicillinase repressor 89.3 0.14 4.9E-06 38.6 1.8 48 38-86 11-62 (126)
474 1bia_A BIRA bifunctional prote 89.1 0.3 1E-05 43.7 4.0 57 39-99 7-63 (321)
475 2b0l_A GTP-sensing transcripti 88.9 0.22 7.6E-06 36.3 2.5 47 39-86 30-77 (102)
476 1p4x_A Staphylococcal accessor 88.7 0.27 9.3E-06 42.2 3.3 65 40-104 37-104 (250)
477 1zkd_A DUF185; NESG, RPR58, st 88.6 1.5 5.1E-05 40.1 8.3 36 188-223 79-121 (387)
478 3qv2_A 5-cytosine DNA methyltr 88.5 1.3 4.4E-05 39.6 7.7 122 189-340 9-157 (327)
479 1g60_A Adenine-specific methyl 88.4 0.41 1.4E-05 41.3 4.3 40 188-229 211-251 (260)
480 4ets_A Ferric uptake regulatio 88.3 0.42 1.4E-05 38.1 4.0 61 37-97 33-100 (162)
481 2p5k_A Arginine repressor; DNA 88.2 0.43 1.5E-05 31.0 3.4 35 44-82 12-51 (64)
482 2qlz_A Transcription factor PF 88.1 0.51 1.7E-05 40.0 4.6 53 40-98 168-220 (232)
483 1yg2_A Gene activator APHA; vi 88.1 0.38 1.3E-05 39.0 3.7 62 38-101 3-76 (179)
484 3rkx_A Biotin-[acetyl-COA-carb 88.0 0.34 1.2E-05 43.3 3.6 59 39-100 5-64 (323)
485 3l7w_A Putative uncharacterize 88.0 0.3 1E-05 36.0 2.7 66 35-102 7-79 (108)
486 2oo3_A Protein involved in cat 87.9 0.77 2.6E-05 40.0 5.6 96 190-290 92-201 (283)
487 1hsj_A Fusion protein consisti 87.8 0.25 8.5E-06 46.8 2.7 67 38-104 405-474 (487)
488 3maj_A DNA processing chain A; 87.4 0.32 1.1E-05 44.3 3.0 53 39-97 330-382 (382)
489 1jhg_A Trp operon repressor; c 87.3 0.48 1.6E-05 34.3 3.3 41 36-78 44-84 (101)
490 3tos_A CALS11; methyltransfera 87.3 1.1 3.9E-05 38.5 6.3 91 190-285 70-215 (257)
491 2hoe_A N-acetylglucosamine kin 87.2 0.29 9.9E-06 44.8 2.7 54 31-86 14-67 (380)
492 3e6c_C CPRK, cyclic nucleotide 86.7 0.59 2E-05 39.6 4.3 44 51-99 176-219 (250)
493 2vxz_A Pyrsv_GP04; viral prote 86.7 0.41 1.4E-05 36.9 2.8 46 40-87 14-59 (165)
494 1z6r_A MLC protein; transcript 86.3 0.59 2E-05 43.1 4.3 51 35-86 14-64 (406)
495 3ggo_A Prephenate dehydrogenas 85.8 4 0.00014 36.1 9.4 86 190-281 33-122 (314)
496 2py6_A Methyltransferase FKBM; 85.5 0.95 3.2E-05 41.9 5.3 55 187-241 224-291 (409)
497 2oz6_A Virulence factor regula 85.4 0.55 1.9E-05 38.3 3.3 35 52-86 164-198 (207)
498 1z05_A Transcriptional regulat 84.8 0.67 2.3E-05 43.2 3.9 52 34-86 36-87 (429)
499 3dv8_A Transcriptional regulat 84.8 0.78 2.7E-05 37.8 4.0 42 52-98 169-210 (220)
500 2zcw_A TTHA1359, transcription 84.8 0.7 2.4E-05 37.7 3.7 42 52-98 146-187 (202)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=5.1e-57 Score=419.26 Aligned_cols=334 Identities=21% Similarity=0.382 Sum_probs=297.7
Q ss_pred ecccccchHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC
Q 018565 9 MMKKEEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS 88 (354)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~ 88 (354)
|.+.|. ++...|+++++||+.+++|++|+||||||.|.+.++|+|++|||+++|++++.++|+||+|++.|++++...
T Consensus 1 M~~~e~-~~~~~L~~l~~Gf~~s~~L~aa~eLglfd~L~~~~~p~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~~- 78 (353)
T 4a6d_A 1 MGSSED-QAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETR- 78 (353)
T ss_dssp CCTTSC-HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHSSSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEE-
T ss_pred CCChhH-HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHhcCCCCCCHHHHHHhhCcCHHHHHHHHHHHHHCCCEEEecc-
Confidence 344444 778889999999999999999999999999987557999999999999999999999999999999986542
Q ss_pred CCCceEecCcccc-hhhcCCCcchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcC---CChhHHHhhChHHHHHH
Q 018565 89 QGSMAFQQTPLSR-RLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHG---KDVWSYAAADAAHSKLI 164 (354)
Q Consensus 89 ~~~~~y~~t~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~ 164 (354)
++++.|++|+.++ ++.+++|.+++.++.+.. +..+..|.+|.+++++++ +++...+| .++|+++.++++....|
T Consensus 79 ~~~~~y~~t~~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~f 156 (353)
T 4a6d_A 79 GGKAFYRNTELSSDYLTTVSPTSQCSMLKYMG-RTSYRCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERLQF 156 (353)
T ss_dssp TTEEEEEECHHHHHHHSTTSTTCCHHHHHHHH-HTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHHHH
T ss_pred CccceeeCCHHHHHHhhcCCchHHHHHHHHhC-HHHHHHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHHHH
Confidence 1245899999986 788888889999887763 467889999999999997 47777776 36899999999999999
Q ss_pred HHHhhhchhhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc------CCCeEEee
Q 018565 165 NDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK------CHGVEHVG 238 (354)
Q Consensus 165 ~~~m~~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~~~v~~~~ 238 (354)
.++|...+....+.+++.++ +++..+|||||||+|.++..+++++|+++++++|+|++++.+++ .+||+++.
T Consensus 157 ~~aM~~~~~~~~~~~~~~~~--~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~ 234 (353)
T 4a6d_A 157 MQALQEVWSVNGRSVLTAFD--LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQE 234 (353)
T ss_dssp HHHHHTTHHHHHHHHHHSSC--GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcC--cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeec
Confidence 99999988888889999999 88889999999999999999999999999999999999988764 58999999
Q ss_pred cCCCC-CCCcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCC
Q 018565 239 GDMFD-GVPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNK 317 (354)
Q Consensus 239 ~d~~~-~~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 317 (354)
+||++ +.|++|+|+++++||+|+|+++.++|++++++|+| ||+|+|+|.+.+++.. .+ .....+|+.|+.. .+
T Consensus 235 gD~~~~~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~p-gg~lli~e~~~~~~~~-~~---~~~~~~dl~ml~~-~~ 308 (353)
T 4a6d_A 235 GDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKP-GGGILVIESLLDEDRR-GP---LLTQLYSLNMLVQ-TE 308 (353)
T ss_dssp SCTTTSCCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCT-TCEEEEEECCCCTTSC-CC---HHHHHHHHHHHHS-SS
T ss_pred CccccCCCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCC-CCEEEEEEeeeCCCCC-CC---HHHHHHHHHHHHh-CC
Confidence 99998 56779999999999999999999999999999999 9999999999887654 32 2456789999988 89
Q ss_pred cccCCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 318 GKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 318 g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
|++||.+||.++|+++||+.+++++++...++|+|+|
T Consensus 309 g~ert~~e~~~ll~~AGf~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 309 GQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp CCCCCHHHHHHHHHHHTCEEEEEECCSSSCEEEEEEC
T ss_pred CcCCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEEe
Confidence 9999999999999999999999999999999999997
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=1.5e-53 Score=397.57 Aligned_cols=341 Identities=33% Similarity=0.587 Sum_probs=300.2
Q ss_pred cccccchHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCC-CCCCHHHHHhHcCC--Ccc---cHHHHHHHHhccCcee
Q 018565 10 MKKEEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKG-SPITLNELASALKC--DPS---LLQRIMRFLIHLKFFK 83 (354)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~-~~~t~~elA~~~g~--~~~---~l~~lL~~L~~~g~l~ 83 (354)
...|..++...+++++++++.+++|++|+++|||+.|.+.+ +|+|++|||+++|+ +|+ .++||||+|++.|+|+
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~~~~~l~~a~~Lgifd~L~~~g~~~~t~~eLA~~~g~~~~~~~~~~l~rlLr~L~~~g~l~ 92 (364)
T 3p9c_A 13 AASADEDACMFALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVT 92 (364)
T ss_dssp CHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTHHHHHHHTTTCCBCHHHHHHTTTCTTCTTHHHHHHHHHHHHHHTTSEE
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHCChHHHHhhcCCCCCCHHHHHHhcCCCCCccchhhHHHHHHHHHhCCCEE
Confidence 55667788999999999999999999999999999998743 69999999999998 888 9999999999999999
Q ss_pred eccCC--CC--CceEecCcccchhhcC-CCcchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhCh
Q 018565 84 EVPTS--QG--SMAFQQTPLSRRLMRH-GENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADA 158 (354)
Q Consensus 84 ~~~~~--~~--~~~y~~t~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~ 158 (354)
+.... +| ++.|++|+.++.|..+ .+.++++++.+..++..+..|.+|.+++++++ ++|+..+|.++|+|+.++|
T Consensus 93 ~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~~~~~ 171 (364)
T 3p9c_A 93 CLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYGMSAFEYHGTDP 171 (364)
T ss_dssp EEEEECSSSCEEEEEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHHTTCH
T ss_pred EeccccCCCCcCCEEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcCCCHHHHHHhCH
Confidence 87210 01 2689999999988765 46689998887666778899999999999987 6899999999999999999
Q ss_pred HHHHHHHHHhhhchhhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhcccCCCeEEee
Q 018565 159 AHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVG 238 (354)
Q Consensus 159 ~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~ 238 (354)
+..+.|+++|...+....+.+++.++ .+.+..+|||||||+|.++..+++++|+++++++|+|++++.+++.++++++.
T Consensus 172 ~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~ 250 (364)
T 3p9c_A 172 RFNRVFNEGMKNHSIIITKKLLELYH-GFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVG 250 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEE
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhcc-cccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEe
Confidence 99999999999988777788888876 25678999999999999999999999999999999999999998888999999
Q ss_pred cCCCCCCCcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCc
Q 018565 239 GDMFDGVPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKG 318 (354)
Q Consensus 239 ~d~~~~~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 318 (354)
+|+++++|+.|+|++++++|+|+++++.++|++++++||| ||+|+|+|.+.++... ..........+++.|+..+.+|
T Consensus 251 ~D~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p-gG~l~i~e~~~~~~~~-~~~~~~~~~~~d~~m~~~~~~g 328 (364)
T 3p9c_A 251 GDMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPA-HGKVVLVQCILPVNPE-ANPSSQGVFHVDMIMLAHNPGG 328 (364)
T ss_dssp CCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCT-TCEEEEEECCBCSSCC-SSHHHHHHHHHHHHHHHHCSSC
T ss_pred CCcCCCCCCCCEEEehHHhccCCHHHHHHHHHHHHHHcCC-CCEEEEEEeccCCCCC-cchhhhhHHHhHHHHHhcccCC
Confidence 9999977767999999999999999999999999999999 9999999999877544 3212223356788888544789
Q ss_pred ccCCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 319 KERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 319 ~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
+.||.++|.++|+++||+.++++++++..++||++|
T Consensus 329 ~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 329 RERYEREFQALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp CCCBHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred ccCCHHHHHHHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 999999999999999999999999999999999997
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=9.2e-52 Score=386.19 Aligned_cols=341 Identities=32% Similarity=0.602 Sum_probs=296.0
Q ss_pred cccccchHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhC---CCCCCHHHHHhHcC-CCcc---cHHHHHHHHhccCce
Q 018565 10 MKKEEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEK---GSPITLNELASALK-CDPS---LLQRIMRFLIHLKFF 82 (354)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~---~~~~t~~elA~~~g-~~~~---~l~~lL~~L~~~g~l 82 (354)
...+..+...++++++.+++.+++|++|+++|||+.|.+. ++|+|++|||+++| .+|. .+.||||+|++.|+|
T Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~~~l~~a~~Lglfd~L~~~~gp~~~~t~~eLA~~~~~~~~~~~~~l~rlLr~L~~~gll 93 (368)
T 3reo_A 14 THSSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVV 93 (368)
T ss_dssp ---CHHHHHHHHHHHHTTTHHHHHHHHHHHTTHHHHHHHHCCTTCCBCHHHHHTTSSCCCTTHHHHHHHHHHHHHHTTSE
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHhhcCCCCCCcCHHHHHHhcCcCCCcchhhHHHHHHHHHhCCCe
Confidence 4446777889999999999999999999999999999873 24799999999998 4665 999999999999999
Q ss_pred eeccC--CCC--CceEecCcccchhhcC-CCcchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhC
Q 018565 83 KEVPT--SQG--SMAFQQTPLSRRLMRH-GENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAAD 157 (354)
Q Consensus 83 ~~~~~--~~~--~~~y~~t~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~ 157 (354)
++... .+| +++|++|+.++.|..+ ++.++++++.+..++..+..|.+|.++++++. ++|+..+|.++|+|+.++
T Consensus 94 ~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~~ 172 (368)
T 3reo_A 94 TYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYGMNIFDYHGTD 172 (368)
T ss_dssp EEEEEECTTSCEEEEEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTTC
T ss_pred EEecccCCCCcccceeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhCCCHHHHHhhC
Confidence 98620 001 2689999999977654 46789999887766778899999999999987 689999999999999999
Q ss_pred hHHHHHHHHHhhhchhhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhcccCCCeEEe
Q 018565 158 AAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHV 237 (354)
Q Consensus 158 ~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~ 237 (354)
|+....|+++|...+....+.+++.++ .+.+..+|||||||+|.++..+++++|+++++++|+|++++.+++.++++++
T Consensus 173 ~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~ 251 (368)
T 3reo_A 173 HRINKVFNKGMSSNSTITMKKILEMYN-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHL 251 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEE
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhcc-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEE
Confidence 999999999999988877788888876 2567799999999999999999999999999999999999999888899999
Q ss_pred ecCCCCCCCcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCC
Q 018565 238 GGDMFDGVPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNK 317 (354)
Q Consensus 238 ~~d~~~~~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 317 (354)
.+|+++++|+.|+|++.+++|+|+++++.++|++++++||| ||+|+|+|.+.++... ..........+++.|+..+.+
T Consensus 252 ~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~ 329 (368)
T 3reo_A 252 GGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPD-HGKVIVAEYILPPSPD-PSIATKVVIHTDALMLAYNPG 329 (368)
T ss_dssp ECCTTTCCCCCSEEEEESCGGGBCHHHHHHHHHHHHHHSCT-TCEEEEEECCCCSSCC-CCHHHHHHHHHHHHHHHHSSB
T ss_pred ecCCCCCCCCCCEEEEechhhcCCHHHHHHHHHHHHHHcCC-CCEEEEEEeccCCCCC-CchhhhHHHhhhHHHHhhcCC
Confidence 99999977767999999999999999999999999999999 9999999999876554 321222345678888765368
Q ss_pred cccCCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 318 GKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 318 g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
|+.||.++|.++|+++||+.+++.+.+...++||++|
T Consensus 330 g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 330 GKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp CCCCCHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred CccCCHHHHHHHHHHCCCeeeEEEEeCCCcEEEEEEe
Confidence 9999999999999999999999999999999999987
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=1.4e-51 Score=382.62 Aligned_cols=325 Identities=24% Similarity=0.430 Sum_probs=291.5
Q ss_pred ccchHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc
Q 018565 13 EEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM 92 (354)
Q Consensus 13 ~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~ 92 (354)
...+...++++++.+++.+++|++++++|||+.|.+ +|+|++|||+++|++++.++||||+|++.|+|++ + ++
T Consensus 18 ~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~g~~~~~l~rlLr~l~~~g~l~~-~----~~ 90 (348)
T 3lst_A 18 DRLQSALALYEEAMGYTYAAALRAAAAVGVADHLVD--GPRTPAELAAATGTDADALRRVLRLLAVRDVVRE-S----DG 90 (348)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHHHHHHHTGGGGGTT--SCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE-E----TT
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHhCCCEEe-c----CC
Confidence 345678889999999999999999999999999986 7999999999999999999999999999999999 4 38
Q ss_pred eEecCcccchhhcCCCcchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChHHHHHHHHHhhhch
Q 018565 93 AFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDT 172 (354)
Q Consensus 93 ~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~~ 172 (354)
.|++|+.++.|.++++.++.+++.+..++..+..|.+|+++++++. ++|...+|.++|+|+.++|+....|.++|....
T Consensus 91 ~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~ 169 (348)
T 3lst_A 91 RFALTDKGAALRSDSPVPARAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVEALYYEGMETVS 169 (348)
T ss_dssp EEEECTTTGGGSTTSSSCSHHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred EEecCHHHHHHhcCCCccHHHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHhh
Confidence 9999999998888877788988877656667899999999999887 578888999999999999999999999999988
Q ss_pred hhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-----CCCeEEeecCCCCCCCc
Q 018565 173 RLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-----CHGVEHVGGDMFDGVPE 247 (354)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-----~~~v~~~~~d~~~~~~~ 247 (354)
....+.+++.++ +++..+|||||||+|.++..+++++|+.+++++|++.++...+. .++++++.+|+++++|+
T Consensus 170 ~~~~~~~~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~ 247 (348)
T 3lst_A 170 AAEHLILARAGD--FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPH 247 (348)
T ss_dssp HTTHHHHHHHSC--CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCC
T ss_pred hhhHHHHHHhCC--ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCC
Confidence 888888999888 78889999999999999999999999999999999877763221 57899999999987779
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHH
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWD 327 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~ 327 (354)
||+|++.+++|+|+++++.++|++++++||| ||+|+|.|.+.++... .. ....+++.++.. .+++.+|.++|.
T Consensus 248 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lkp-gG~l~i~e~~~~~~~~-~~----~~~~~d~~~~~~-~~~~~~t~~e~~ 320 (348)
T 3lst_A 248 ADVHVLKRILHNWGDEDSVRILTNCRRVMPA-HGRVLVIDAVVPEGND-AH----QSKEMDFMMLAA-RTGQERTAAELE 320 (348)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHTCCT-TCEEEEEECCBCSSSS-CC----HHHHHHHHHHHT-TSCCCCBHHHHH
T ss_pred CcEEEEehhccCCCHHHHHHHHHHHHHhcCC-CCEEEEEEeccCCCCC-cc----hhhhcChhhhhc-CCCcCCCHHHHH
Confidence 9999999999999999999999999999999 9999999998876543 21 345677888776 888999999999
Q ss_pred HHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 328 YVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 328 ~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
++|+++||+++++++.+...++|+++|
T Consensus 321 ~ll~~aGf~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 321 PLFTAAGLRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp HHHHHTTEEEEEEEECSSSCEEEEEEE
T ss_pred HHHHHCCCceEEEEECCCCcEEEEEEe
Confidence 999999999999999878899999986
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=9.1e-51 Score=379.84 Aligned_cols=322 Identities=27% Similarity=0.464 Sum_probs=292.2
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCce-E
Q 018565 16 DAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMA-F 94 (354)
Q Consensus 16 ~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~-y 94 (354)
+...++++++.+++.+++|++++++|||+.|.+ +|+|++|||+++|++++.++||||+|++.|+|++.+ ++. |
T Consensus 37 ~~~~~l~~l~~~~~~~~~l~~a~~lglf~~l~~--g~~t~~eLA~~~g~~~~~l~rlLr~L~~~g~l~~~~----~~~~y 110 (369)
T 3gwz_A 37 AAEETVNDILQGAWKARAIHVAVELGVPELLQE--GPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLG----HDDLF 110 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGTT--SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSSEECS----STTEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCChhhhhcC--CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCCEEEeC----CCceE
Confidence 467789999999999999999999999999986 799999999999999999999999999999999976 378 9
Q ss_pred ecCcccchhhcCCCcchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChHHHHHHHHHhhhchhh
Q 018565 95 QQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRL 174 (354)
Q Consensus 95 ~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~~~~ 174 (354)
++|+.++.|.++++.++.+++.+..++..+..|.+|.++++++. ++|...+|.++|+|+.++|+....|..+|......
T Consensus 111 ~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~ 189 (369)
T 3gwz_A 111 AQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAMGSVSLT 189 (369)
T ss_dssp ECCHHHHTTSCCTTCHHHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ecCHHHHHHhcCCchhHHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHHhh
Confidence 99999998888888788888887656557789999999999987 57888899899999999999999999999998887
Q ss_pred hHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCCCCC-
Q 018565 175 AMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFDGVP- 246 (354)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~~~~- 246 (354)
..+.+++.++ +.+..+|||||||+|.++..+++++|+.+++++|++.+++.+++ .++|+++.+|+++++|
T Consensus 190 ~~~~l~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~ 267 (369)
T 3gwz_A 190 EAGQVAAAYD--FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPD 267 (369)
T ss_dssp HHHHHHHHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS
T ss_pred hHHHHHHhCC--CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC
Confidence 7888888888 77889999999999999999999999999999999988888774 4789999999998777
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHH
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEW 326 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~ 326 (354)
+||+|++.+++|+|+++.+.++|++++++||| ||+++|.|.+.++... . . ...+++.|+.. .+++.+|.++|
T Consensus 268 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p-gG~l~i~e~~~~~~~~-~--~---~~~~d~~~~~~-~~g~~~t~~e~ 339 (369)
T 3gwz_A 268 GADVYLIKHVLHDWDDDDVVRILRRIATAMKP-DSRLLVIDNLIDERPA-A--S---TLFVDLLLLVL-VGGAERSESEF 339 (369)
T ss_dssp SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT-TCEEEEEEEBCCSSCC-H--H---HHHHHHHHHHH-HSCCCBCHHHH
T ss_pred CceEEEhhhhhccCCHHHHHHHHHHHHHHcCC-CCEEEEEEeccCCCCC-C--c---hhHhhHHHHhh-cCCccCCHHHH
Confidence 69999999999999999999999999999999 9999999999877654 2 1 45678888777 78999999999
Q ss_pred HHHHHHcCCceeEEEE-cCCceeEEEEeC
Q 018565 327 DYVLRQAGFSRYNITS-IHAVQSLIEAFP 354 (354)
Q Consensus 327 ~~ll~~aGf~~~~~~~-~~~~~~~i~~~~ 354 (354)
.++|+++||+++++++ .++..++|+++|
T Consensus 340 ~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 340 AALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 9999999999999999 678899999986
No 6
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=7.6e-51 Score=375.44 Aligned_cols=317 Identities=23% Similarity=0.343 Sum_probs=281.9
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 18 KVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 18 ~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
+.++++++.|++.+++|++++++|||+.|.+ +|.|++|||+++|++++.++||||+|++.|++++.+ ++.|++|
T Consensus 6 ~~~l~~~~~g~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~~~~~~~l~rlLr~l~~~gl~~~~~----~~~y~~t 79 (332)
T 3i53_A 6 AHIGLRALADLATPMAVRVAATLRVADHIAA--GHRTAAEIASAAGAHADSLDRLLRHLVAVGLFTRDG----QGVYGLT 79 (332)
T ss_dssp CSSCHHHHTCCHHHHHHHHHHHHTHHHHHHT--TCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECT----TSBEEEC
T ss_pred HHHHHHHHHhhHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCcEEecC----CCeEEcC
Confidence 4467899999999999999999999999986 799999999999999999999999999999999986 4899999
Q ss_pred cccchhhcCCCcchHHHHHHhcCchhh-hhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChHHHHHHHHHhhhchhhhH
Q 018565 98 PLSRRLMRHGENNMAAFILLESSPVML-APWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAM 176 (354)
Q Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~~~~~~ 176 (354)
+.++.|.++++.++.+++.+..++..+ ..|.+|+++++++. ++|...+|.++|+++.++|+....|..+|........
T Consensus 80 ~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~ 158 (332)
T 3i53_A 80 EFGEQLRDDHAAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDY 158 (332)
T ss_dssp TTGGGGSTTCTTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHhcCCchhHHHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHHHHHhHHhhH
Confidence 999988877777888888765433345 78999999999987 5788889989999999999999999999998877666
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCCCCC-cc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFDGVP-EA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~~~~-~~ 248 (354)
+.+++.++ +.+..+|||||||+|.++..+++++|+.+++++|+|.+++.+++ .++++++.+|+++++| +|
T Consensus 159 ~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~ 236 (332)
T 3i53_A 159 TGIAAKYD--WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGA 236 (332)
T ss_dssp TTGGGSSC--CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSC
T ss_pred HHHHHhCC--CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCC
Confidence 77777787 67789999999999999999999999999999999999888774 4789999999998777 69
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHH
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDY 328 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ 328 (354)
|+|++++++|+|+++++.++|++++++|+| ||+|+|.|.+.++. . . ...+++.|+.. .+++.+|.++|.+
T Consensus 237 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~-~-~------~~~~d~~~~~~-~~~~~~t~~e~~~ 306 (332)
T 3i53_A 237 GGYVLSAVLHDWDDLSAVAILRRCAEAAGS-GGVVLVIEAVAGDE-H-A------GTGMDLRMLTY-FGGKERSLAELGE 306 (332)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHHTT-TCEEEEEECCCC-----C------CHHHHHHHHHH-HSCCCCCHHHHHH
T ss_pred cEEEEehhhccCCHHHHHHHHHHHHHhcCC-CCEEEEEeecCCCC-C-c------cHHHHHHHHhh-CCCCCCCHHHHHH
Confidence 999999999999999999999999999999 99999999887765 3 2 24677777776 7889999999999
Q ss_pred HHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 329 VLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 329 ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
+|+++||+.+++++.+. .++|++++
T Consensus 307 ll~~aGf~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 307 LAAQAGLAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp HHHHTTEEEEEEEECSS-SEEEEEEE
T ss_pred HHHHCCCEEEEEEECCC-cEEEEEee
Confidence 99999999999999988 99999975
No 7
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=3.5e-50 Score=374.65 Aligned_cols=341 Identities=37% Similarity=0.677 Sum_probs=295.2
Q ss_pred ccccchHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCC---CcccHHHHHHHHhccCceeec--
Q 018565 11 KKEEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKC---DPSLLQRIMRFLIHLKFFKEV-- 85 (354)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~---~~~~l~~lL~~L~~~g~l~~~-- 85 (354)
+.+++++..++++++.+++.+++|++++++|||+.|...++|.|++|||+++|+ +++.++||||+|++.|+|++.
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~gll~~~~~ 83 (358)
T 1zg3_A 4 ESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFLRLLTHNGFFAKTIV 83 (358)
T ss_dssp TSCCTTHHHHHHHHHTTHHHHHHHHHHHHHTHHHHHHHHTSCEEHHHHHHHTTCCTTTHHHHHHHHHHHHHTTSEEEEEE
T ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHHHHCChHhHHhhcCCCcCHHHHHHhcCCCCcchHHHHHHHHHHhhCCcEEEecc
Confidence 467889999999999999999999999999999999874359999999999999 588999999999999999987
Q ss_pred ---c-CCCCCceEecCcccchhhcCCCcchHHHHHHhcCchhhhhhhhHHHhHhcCC-CchhhhhcCCChhHHHhhChHH
Q 018565 86 ---P-TSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANG-TSAFDKAHGKDVWSYAAADAAH 160 (354)
Q Consensus 86 ---~-~~~~~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~g~~~~~~~~~~~~~ 160 (354)
+ ..+.++.|++|+.+++|.+++|.++++++.+..++..+..|.+|+++++++. .++|+..+|.++|+++.++|+.
T Consensus 84 ~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p~~ 163 (358)
T 1zg3_A 84 KGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSES 163 (358)
T ss_dssp CCSSSSCCCEEEEEECHHHHTTCTTSTTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGGGH
T ss_pred cccccCCCCCCEEeCCHHHHHHhCCCCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcChhh
Confidence 2 1000279999999999998888889999988766677899999999999883 2688888899999999999999
Q ss_pred HH--HHHHHhhhchhhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhcccCCCeEEee
Q 018565 161 SK--LINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVG 238 (354)
Q Consensus 161 ~~--~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~ 238 (354)
.. .|+..|........ .+++.+++.+.+..+|||||||+|.++..+++++|+++++++|++.+++.+++..+++++.
T Consensus 164 ~~~~~f~~~m~~~~~~~~-~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~ 242 (358)
T 1zg3_A 164 STLSMFQDAMASDSRMFK-LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVG 242 (358)
T ss_dssp HHHHHHHHHHHHHHHTHH-HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEE
T ss_pred hhHHHHHHHHhcccHHHH-HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEe
Confidence 99 99999998776555 6777772125677899999999999999999999999999999999999888766799999
Q ss_pred cCCCCCCCcceEEEeccccccCChHHHHHHHHHHHHhcCCC--CceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccC
Q 018565 239 GDMFDGVPEADAAIIKWVLHDWGDDECIKILKNCKEAITKD--KGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTN 316 (354)
Q Consensus 239 ~d~~~~~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~--gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 316 (354)
+|+++++|+||+|++++++|+|+++.+.++|++++++|+|+ ||+++|.|...++... .+........+++.|+.. .
T Consensus 243 ~d~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~-~~~~~~~~~~~d~~~~~~-~ 320 (358)
T 1zg3_A 243 GDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSD-DRGLTELQLDYDLVMLTM-F 320 (358)
T ss_dssp CCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCS-CHHHHHHHHHHHHHHHHH-H
T ss_pred CccCCCCCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCc-cchhhhHHHhhCHHHhcc-C
Confidence 99999877899999999999999999999999999999962 7999999999876544 211122445677777765 7
Q ss_pred CcccCCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 317 KGKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 317 ~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
+|+.++.++|.++|+++||+.+++++.++..++|+++|
T Consensus 321 ~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 321 LGKERTKQEWEKLIYDAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp SCCCEEHHHHHHHHHHTTCCEEEEEEETTTEEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCCeeEEEecCCCcEEEEEeC
Confidence 88999999999999999999999999988899999987
No 8
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2e-49 Score=366.34 Aligned_cols=319 Identities=25% Similarity=0.420 Sum_probs=285.2
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEe
Q 018565 16 DAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQ 95 (354)
Q Consensus 16 ~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~ 95 (354)
.+...+++++.+++.+++|++++++|||+.|.+ +|.|++|||+++|++++.++||||+|++.|+|++.+ ++.|+
T Consensus 7 ~~~~~l~~~~~~~~~~~~l~~~~~lgi~~~l~~--~~~t~~ela~~~~~~~~~l~r~Lr~L~~~g~l~~~~----~~~y~ 80 (334)
T 2ip2_A 7 AAARNLIQVVTGEWKSRCVYVATRLGLADLIES--GIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQGDT----RDGYA 80 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET----TTEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCcHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHhCCceEecC----CCeEe
Confidence 567889999999999999999999999999976 799999999999999999999999999999999886 48999
Q ss_pred cCcccchhhcCCCcchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChHHHHHHHHHhhhchhhh
Q 018565 96 QTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLA 175 (354)
Q Consensus 96 ~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~~~~~ 175 (354)
+|+.++.|. ++|.++++++.+..++.. ..|.+|+++++++. ++|+..+|.++|+++.++|+....|+++| ......
T Consensus 81 ~t~~s~~l~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~~~~~ 156 (334)
T 2ip2_A 81 NTPTSHLLR-DVEGSFRDMVLFYGEEFH-AAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLA 156 (334)
T ss_dssp ECHHHHTTS-SSTTCSHHHHHHHTTHHH-HHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GGGHHH
T ss_pred cCHHHHHHh-CCCccHHHHHHHhcCchh-hHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHHHH-HHHHHH
Confidence 999999888 777789998887765444 89999999999987 58888889999999999999999999999 877777
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCCCCCc-
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFDGVPE- 247 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~~~~~- 247 (354)
.+.+++.++ +.+ .+|||||||+|..+..+++++|+.+++++|++.+++.+++ .++++++.+|+++++|+
T Consensus 157 ~~~~~~~~~--~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 233 (334)
T 2ip2_A 157 FHEIPRLLD--FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSN 233 (334)
T ss_dssp HHHHHHHSC--CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSS
T ss_pred HHHHHHhCC--CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCC
Confidence 788888887 666 9999999999999999999999999999999888887764 47899999999987665
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHH
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWD 327 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~ 327 (354)
||+|++.+++|+|+++.+.++|++++++|+| ||+++|.|...++... . .....+++.++.. .+|+.++.++|.
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~-~----~~~~~~~~~~~~~-~~~~~~t~~e~~ 306 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAG-DGRVVVIERTISASEP-S----PMSVLWDVHLFMA-CAGRHRTTEEVV 306 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCT-TCEEEEEECCBCSSSC-C----HHHHHHHHHHHHH-HSCCCCBHHHHH
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCC-CCEEEEEEeccCCCCC-c----chhHHhhhHhHhh-CCCcCCCHHHHH
Confidence 9999999999999999999999999999999 9999999998776443 2 1345677777765 678899999999
Q ss_pred HHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 328 YVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 328 ~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
++++++||+.+++++.++..++|+++|
T Consensus 307 ~ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 307 DLLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HHHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHCCCceeEEEECCCCCEEEEEEe
Confidence 999999999999999988899999986
No 9
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=1.9e-49 Score=368.87 Aligned_cols=339 Identities=33% Similarity=0.654 Sum_probs=293.8
Q ss_pred ecccccchHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCC---cccHHHHHHHHhccCceeec
Q 018565 9 MMKKEEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCD---PSLLQRIMRFLIHLKFFKEV 85 (354)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~---~~~l~~lL~~L~~~g~l~~~ 85 (354)
..+.+++++..++++++.+++.+++|++++++|||+.|...++|.|++|||+++|++ ++.++||||+|++.|+|++.
T Consensus 8 ~~~~~~~~a~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~ela~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 87 (352)
T 1fp2_A 8 RKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEII 87 (352)
T ss_dssp CCSTHHHHHHHHHHHHHTTHHHHHHHHHHHHTTHHHHHHHHTSCEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTTSEEEE
T ss_pred CChHHHhhHHHHHHHHHHHHHHHHHHHHHHHCChhhhhhhcCCCccHHHHHHHhCcCCCChHHHHHHHHHHHhCCeEEEe
Confidence 456788899999999999999999999999999999998743599999999999995 77999999999999999987
Q ss_pred cCCCCCceEecCcccchhhcCCCcchHHHHHHhcCchhhhhhhhHHHhHh-cCCCchhhhhcCCChhHHHhhChHHHHHH
Q 018565 86 PTSQGSMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVL-ANGTSAFDKAHGKDVWSYAAADAAHSKLI 164 (354)
Q Consensus 86 ~~~~~~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 164 (354)
. ++++.|++|+.+++|.+++|.++++++.+..++..+..|.+|+++++ ++. ++|...+|.++|+++.++|+....|
T Consensus 88 ~--~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f 164 (352)
T 1fp2_A 88 T--KEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFWDFLDKNPEYNTSF 164 (352)
T ss_dssp E--SSSEEEEECHHHHTTSTTSSSCCHHHHHHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHHHHHHHCHHHHHHH
T ss_pred c--CCCCeEeCCHHHHHHhCCCCccHHHHHHHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHHHHHHhChHHHHHH
Confidence 2 01389999999999998888889999888766677889999999999 665 6898889999999999999999999
Q ss_pred HHHhhhchhhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhcccCCCeEEeecCCCCC
Q 018565 165 NDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDG 244 (354)
Q Consensus 165 ~~~m~~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~ 244 (354)
+.+|........+. ++.+++.+.+..+|||||||+|.++..+++++|+.+++++|++.+++.+++.++++++.+|++++
T Consensus 165 ~~~m~~~~~~~~~~-~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~ 243 (352)
T 1fp2_A 165 NDAMASDSKLINLA-LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTS 243 (352)
T ss_dssp HHHHHHTHHHHHHH-HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTTC
T ss_pred HHHHHhcchhhhhH-HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccCC
Confidence 99999887766566 66672126678899999999999999999999999999999999999988766799999999988
Q ss_pred CCcceEEEeccccccCChHHHHHHHHHHHHhcCCC--CceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCC
Q 018565 245 VPEADAAIIKWVLHDWGDDECIKILKNCKEAITKD--KGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERS 322 (354)
Q Consensus 245 ~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~--gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t 322 (354)
+|+||+|++.+++|+|+++.+.++|++++++|||+ ||+++|.|...++... .+........+++.|+.. +++.++
T Consensus 244 ~p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~-~~~~~~~~~~~d~~~~~~--~g~~~t 320 (352)
T 1fp2_A 244 IPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKD-ENQVTQIKLLMDVNMACL--NGKERN 320 (352)
T ss_dssp CCCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTS-CHHHHHHHHHHHHHGGGG--TCCCEE
T ss_pred CCCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCC-ccchhhhHhhccHHHHhc--cCCCCC
Confidence 77899999999999999999999999999999962 7999999998876543 211112344567777653 488899
Q ss_pred HHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 323 LKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 323 ~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
.++|.++++++||+.+++++.++..++|+++|
T Consensus 321 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 321 EEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHCCCCeeEEEecCCCcEEEEEeC
Confidence 99999999999999999999888899999987
No 10
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=2e-49 Score=371.29 Aligned_cols=343 Identities=29% Similarity=0.550 Sum_probs=278.5
Q ss_pred eeeecccccchHHHHHH--HHHhhhHHHHHHHHHHHcChhhhhhhCCC-C---CCHHHHHhHcCC------CcccHHHHH
Q 018565 6 VQVMMKKEEDDAKVEIW--KYVFGFTNMAVVKCAVELGIAEAVEEKGS-P---ITLNELASALKC------DPSLLQRIM 73 (354)
Q Consensus 6 ~~~~~~~~~~~~~~~l~--~~~~~~~~~~~l~~a~~lglf~~L~~~~~-~---~t~~elA~~~g~------~~~~l~~lL 73 (354)
.++....+++++..+++ +++.+++.+++|++++++|||+.|.+. + | .|++|||+++|+ +++.++|||
T Consensus 11 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~a~~lgif~~L~~~-g~pg~~~t~~eLA~~~~~~~~~~~~~~~l~rlL 89 (372)
T 1fp1_D 11 NQISATSEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKA-TPPGAFMSPSEIASKLPASTQHSDLPNRLDRML 89 (372)
T ss_dssp --------CCHHHHHHHHHHHHHTTHHHHHHHHHHHTTHHHHHHTC-SSTTCCBCHHHHHTTSCGGGCCTTHHHHHHHHH
T ss_pred cccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHhc-CCCCCCcCHHHHHHhcCCCCCCCcChHHHHHHH
Confidence 34566778888898999 999999999999999999999999863 3 6 999999999999 678999999
Q ss_pred HHHhccCceeecc---CCCC--CceEecCcccchhhcCCC-cchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcC
Q 018565 74 RFLIHLKFFKEVP---TSQG--SMAFQQTPLSRRLMRHGE-NNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHG 147 (354)
Q Consensus 74 ~~L~~~g~l~~~~---~~~~--~~~y~~t~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g 147 (354)
|+|++.|+|++.. . +| ++.|++|+.+++|.++++ .++++++.+..++..+..|.+|+++++++..++|+..+|
T Consensus 90 r~L~~~gll~~~~~~~~-~g~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g 168 (372)
T 1fp1_D 90 RLLASYSVLTSTTRTIE-DGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHG 168 (372)
T ss_dssp HHHHHTTSEEEEEEECT-TSCEEEEEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC---------
T ss_pred HHHhhCCceEecccccC-CCCcCCeEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCCChhHHHhC
Confidence 9999999999871 1 11 269999999999988877 688888888766677889999999999883368888889
Q ss_pred CChhHHHhhChHHHHHHHHHhhhchhhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhh
Q 018565 148 KDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCV 227 (354)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~ 227 (354)
.++|+++.++|+....|+.+|........+.+++.++ .+.+..+|||||||+|.++..+++++|+++++++|++.+++.
T Consensus 169 ~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~ 247 (372)
T 1fp1_D 169 VTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIEN 247 (372)
T ss_dssp -----CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTT
T ss_pred CCHHHHHHhCHHHHHHHHHHHHhhhHHHHHHHHHHhh-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHh
Confidence 8999999999999999999999887777778888775 256778999999999999999999999999999999999999
Q ss_pred cccCCCeEEeecCCCCCCCcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhc
Q 018565 228 AEKCHGVEHVGGDMFDGVPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLML 307 (354)
Q Consensus 228 a~~~~~v~~~~~d~~~~~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~ 307 (354)
+++.++++++.+|+++++|.||+|++.+++|+|+++.+.++|++++++||| ||+++|.|...++... .+........+
T Consensus 248 a~~~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~-~~~~~~~~~~~ 325 (372)
T 1fp1_D 248 APPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSP-NGKVIIVEFILPEEPN-TSEESKLVSTL 325 (372)
T ss_dssp CCCCTTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEEECSSCC-SSHHHHHHHHH
T ss_pred hhhcCCCEEEeCCcccCCCCCCEEEEecccccCCHHHHHHHHHHHHHhcCC-CCEEEEEEeccCCCCc-cchHHHHHHHh
Confidence 887678999999999987779999999999999999999999999999999 9999999998876544 21111124566
Q ss_pred cHHhhcccCCcccCCHHHHHHHHHHcCCceeEEEEc-CCceeEEEEeC
Q 018565 308 DMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSI-HAVQSLIEAFP 354 (354)
Q Consensus 308 ~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~~i~~~~ 354 (354)
++.++.. .+++.++.++|.++|+++||+.+++++. ++..++||++|
T Consensus 326 d~~~~~~-~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 326 DNLMFIT-VGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHHHHHH-HSCCCEEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred hHHHHhc-cCCccCCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 7776654 6788999999999999999999999984 45259999987
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=4.3e-47 Score=354.23 Aligned_cols=327 Identities=16% Similarity=0.172 Sum_probs=266.7
Q ss_pred ccccchHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC
Q 018565 11 KKEEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG 90 (354)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~ 90 (354)
+.+.+++..++++++.|++.+++|++++++|||+.|++.++|+|++|||+++|++++.++||||+|++.|+|++++
T Consensus 9 ~~~~~~a~~~l~~l~~g~~~~~~l~~a~~lgifd~L~~~~~~~t~~eLA~~~g~~~~~l~rlLr~l~~~g~l~~~~---- 84 (363)
T 3dp7_A 9 QCTAAEAQRLAQEIAFGPVVFQVSRLMLKFGIFQLLSGKREGYTLQEISGRTGLTRYAAQVLLEASLTIGTILLEE---- 84 (363)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHTCTTCBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEET----
T ss_pred chhHHHHHHHHHHHHhhHHHHHHHHHHHHhCHHHHHHhcCCCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCeEecC----
Confidence 4567889999999999999999999999999999998744799999999999999999999999999999998864
Q ss_pred CceEecCcccchhhcCCCcchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcC--CChhHHHhhChHHHHH----H
Q 018565 91 SMAFQQTPLSRRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHG--KDVWSYAAADAAHSKL----I 164 (354)
Q Consensus 91 ~~~y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~----~ 164 (354)
++|++|+.+++|.++++.+. ++.+. .+..++.|.+|+++++++++ ++...+| .++|+++.++|+.... |
T Consensus 85 -~~y~~t~~s~~L~~~~~~~~--~~~~~-~~~~~~~~~~L~~~lr~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~f 159 (363)
T 3dp7_A 85 -DRYVLAKAGWFLLNDKMARV--NMEFN-HDVNYQGLFHLEEALLNGRP-EGLKVFGEWPTIYEGLSQLPEQVQKSWFGF 159 (363)
T ss_dssp -TEEEECHHHHHHHHCHHHHH--HHHHH-HHTTHHHHTTHHHHHHHSSC-GGGGGTCCCSSHHHHGGGSCHHHHHHHHHH
T ss_pred -CEEecccchHHhhCCCcccc--hheee-cHHhhhhHHHHHHHHhcCCC-ccccccCchHhHHHHHhhCHHHHHHHHHHH
Confidence 89999999998887764332 23332 34678999999999999974 6667777 6899999999987663 6
Q ss_pred HHHhhhchhhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEe
Q 018565 165 NDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHV 237 (354)
Q Consensus 165 ~~~m~~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~ 237 (354)
..+|..... ..++..+. ..+..+|||||||+|.++..+++++|+.+++++|+|++++.+++ .++++++
T Consensus 160 ~~~~~~~~~---~~~l~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~ 234 (363)
T 3dp7_A 160 DHFYSDQSF---GKALEIVF--SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGH 234 (363)
T ss_dssp HHHTTCCCC---HHHHHHHG--GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEE
T ss_pred HHHhhhhhH---HHHHHHhc--ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEE
Confidence 666654331 22333333 24678999999999999999999999999999999999888775 2589999
Q ss_pred ecCCCCC---CC-cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcc-hhhhhhhccHHhh
Q 018565 238 GGDMFDG---VP-EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNK-FKSVRLMLDMVMM 312 (354)
Q Consensus 238 ~~d~~~~---~~-~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~-~~~~~~~~~l~~~ 312 (354)
.+|++++ +| +||+|++.+++|+|+++++.++|++++++||| ||+|+|+|.+.++... ... +.......++.++
T Consensus 235 ~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~-~~~~~~~~~~~~~~~~~ 312 (363)
T 3dp7_A 235 GANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGK-DSKVYIMETLWDRQRY-ETASYCLTQISLYFTAM 312 (363)
T ss_dssp ECCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCT-TCEEEEEECCTTSCSS-HHHHHHHHHHHHHHHHS
T ss_pred EccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCC-CcEEEEEeeccCCccc-cchhhHHHHhhhhHHhh
Confidence 9999984 66 59999999999999999999999999999999 9999999988876544 210 0011122233334
Q ss_pred cccCCcccCCHHHHHHHHHHcCCceeEEEEcCC-ceeEEEEeC
Q 018565 313 AHTNKGKERSLKEWDYVLRQAGFSRYNITSIHA-VQSLIEAFP 354 (354)
Q Consensus 313 ~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~-~~~~i~~~~ 354 (354)
.. .+++.+|.++|.++|+++||+++++++..+ ..++|+++|
T Consensus 313 ~~-~~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 313 AN-GNSKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp SC-SSCCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred hC-CCCcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEee
Confidence 33 667899999999999999999999997755 589999875
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=3.3e-46 Score=349.94 Aligned_cols=323 Identities=21% Similarity=0.349 Sum_probs=278.8
Q ss_pred hHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc--e
Q 018565 16 DAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM--A 93 (354)
Q Consensus 16 ~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~--~ 93 (354)
+...++++++.+++.+++|++++++|||+.|.. +|.|++|||+++|++++.++|+||+|++.|+|++.+ ++ .
T Consensus 15 ~~~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~eLA~~~g~~~~~l~r~Lr~L~~~Gll~~~~----~~~~~ 88 (374)
T 1qzz_A 15 QDLDVLLKNLGNLVTPMALRVAATLRLVDHLLA--GADTLAGLADRTDTHPQALSRLVRHLTVVGVLEGGE----KQGRP 88 (374)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEECCC----C-CCC
T ss_pred hHHHHHHHHHHhhHHHHHHHHHHHcChHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCEEEeC----CCCeE
Confidence 345679999999999999999999999999975 799999999999999999999999999999999865 36 9
Q ss_pred EecCcccchhhcCCCcchHHHHHHhcCchhh-hhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChHHHHHHHHHhhhch
Q 018565 94 FQQTPLSRRLMRHGENNMAAFILLESSPVML-APWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDT 172 (354)
Q Consensus 94 y~~t~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~~ 172 (354)
|++|+.++.|..+++.+++.++.+..++..+ ..|.+|.+.++++. +++...+|.++|+++.++|+....|..+|....
T Consensus 89 y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~ 167 (374)
T 1qzz_A 89 LRPTRLGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALADSFDALMSCDE 167 (374)
T ss_dssp CEECTTGGGGSTTCTTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHHHHHHHTCGGGS
T ss_pred EEEChHHHhhcCCCcccHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHHHHHHHHHHHhh
Confidence 9999999999988888898888766433455 78999999999987 478888899999999999999999999999877
Q ss_pred hhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCCCC
Q 018565 173 RLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFDGV 245 (354)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~~~ 245 (354)
....+.+++.++ +.+..+|||||||+|.++..+++.+|+.+++++|++.+++.+++ .++++++.+|+++++
T Consensus 168 ~~~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 245 (374)
T 1qzz_A 168 DLAYEAPADAYD--WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPL 245 (374)
T ss_dssp TTTTHHHHHTSC--CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HhHHHHHHHhCC--CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcC
Confidence 777788888887 77789999999999999999999999999999999888887764 258999999999866
Q ss_pred Cc-ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee--eeCCCCCCCcchhhhhhhccHHhhcccCCcccCC
Q 018565 246 PE-ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA--IIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERS 322 (354)
Q Consensus 246 ~~-~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t 322 (354)
|. ||+|++.+++|+|+++.+.++|++++++|+| ||+++|.|. ..++... . .....+++.++.. .+++.++
T Consensus 246 ~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~~-~----~~~~~~~~~~~~~-~~~~~~~ 318 (374)
T 1qzz_A 246 PVTADVVLLSFVLLNWSDEDALTILRGCVRALEP-GGRLLVLDRADVEGDGAD-R----FFSTLLDLRMLTF-MGGRVRT 318 (374)
T ss_dssp SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEECCH--------H----HHHHHHHHHHHHH-HSCCCCC
T ss_pred CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCC-CcEEEEEechhhcCCCCC-c----chhhhcchHHHHh-CCCcCCC
Confidence 65 9999999999999999889999999999999 999999998 7654432 1 1334567777665 6788999
Q ss_pred HHHHHHHHHHcCCceeEEEEcCCce-----eEEEEeC
Q 018565 323 LKEWDYVLRQAGFSRYNITSIHAVQ-----SLIEAFP 354 (354)
Q Consensus 323 ~~e~~~ll~~aGf~~~~~~~~~~~~-----~~i~~~~ 354 (354)
.++|.++|+++||+++++++.+... ++|+++|
T Consensus 319 ~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 319 RDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp HHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 9999999999999999999988777 8999875
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=6.7e-46 Score=346.13 Aligned_cols=322 Identities=21% Similarity=0.367 Sum_probs=281.8
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEec
Q 018565 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQ 96 (354)
Q Consensus 17 ~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~ 96 (354)
..+++++++.+++.+++|++++++|||+.|.. +|.|++|||+++|+++..++|+|++|++.|+|++.+ ++.|++
T Consensus 19 ~~~~~~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~~~~~~----~g~y~~ 92 (360)
T 1tw3_A 19 DALRTLIRLGSLHTPMVVRTAATLRLVDHILA--GARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDA----PGEFVP 92 (360)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHTTHHHHHHT--TCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE----TTEEEE
T ss_pred chHHHHHHHHhHHHHHHHHHHHHhCHHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCEEecC----CCeEEe
Confidence 36788999999999999999999999999975 799999999999999999999999999999999866 389999
Q ss_pred CcccchhhcCCCcchHHHHHHhcCch-hhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChHHHHHHHHHhhhchhhh
Q 018565 97 TPLSRRLMRHGENNMAAFILLESSPV-MLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLA 175 (354)
Q Consensus 97 t~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~~~~~ 175 (354)
|+.+++|.+++|.+++.++.+...+. .+..|.+|.+.++++. +++...+|.++|+++.++|+....|...|.......
T Consensus 93 t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~~~~~~ 171 (360)
T 1tw3_A 93 TEVGELLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVA 171 (360)
T ss_dssp CTTGGGGSTTSTTCHHHHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTT
T ss_pred CHHHHHHhcCCchhHHHHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHHHHHHHHHh
Confidence 99999999888888988876654333 5688999999999987 467778889999999999999999999999887777
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCCCCCc-
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFDGVPE- 247 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~~~~~- 247 (354)
.+.+++.++ +.+..+|||||||+|.++..+++++|+.+++++|++.+++.+++ .++++++.+|+++++|.
T Consensus 172 ~~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 249 (360)
T 1tw3_A 172 FDAPAAAYD--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRK 249 (360)
T ss_dssp THHHHHHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSC
T ss_pred HHHHHHhCC--CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCC
Confidence 788888888 77789999999999999999999999999999999888887764 34899999999986665
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeee-eCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHH
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAI-IEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEW 326 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~ 326 (354)
||+|++.+++|+|+++++.++|++++++|+| ||+++|.|.. .++... . .....+++.++.. .+++.++.++|
T Consensus 250 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~~-~----~~~~~~~~~~~~~-~~~~~~t~~e~ 322 (360)
T 1tw3_A 250 ADAIILSFVLLNWPDHDAVRILTRCAEALEP-GGRILIHERDDLHENSF-N----EQFTELDLRMLVF-LGGALRTREKW 322 (360)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEE-EEEEEEEECCBCGGGCC-S----HHHHHHHHHHHHH-HSCCCCBHHHH
T ss_pred ccEEEEcccccCCCHHHHHHHHHHHHHhcCC-CcEEEEEEEeccCCCCC-c----chhhhccHHHhhh-cCCcCCCHHHH
Confidence 9999999999999999889999999999999 9999999988 654432 2 1234567777655 57889999999
Q ss_pred HHHHHHcCCceeEEEEcCCc-----eeEEEEeC
Q 018565 327 DYVLRQAGFSRYNITSIHAV-----QSLIEAFP 354 (354)
Q Consensus 327 ~~ll~~aGf~~~~~~~~~~~-----~~~i~~~~ 354 (354)
.++|+++||+++++++.+.. .++|+++|
T Consensus 323 ~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 323 DGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp HHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 99999999999999988665 88999875
No 14
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=4.4e-45 Score=339.60 Aligned_cols=320 Identities=20% Similarity=0.254 Sum_probs=270.1
Q ss_pred ecccccchHHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC
Q 018565 9 MMKKEEDDAKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS 88 (354)
Q Consensus 9 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~ 88 (354)
..+...++.+..+++++.+++.+++|++++++|||+.|. +|.|++|||+++|++++.++||||+|++.|+|++.+
T Consensus 16 ~~~~~~l~~p~~l~~~~~~~~~~~~l~~a~~lgif~~l~---~~~t~~elA~~~~~~~~~l~rlLr~L~~~gll~~~~-- 90 (352)
T 3mcz_A 16 TEDKAALTSVVDLVKLSDQYRQSAILHYAVADKLFDLTQ---TGRTPAEVAASFGMVEGKAAILLHALAALGLLTKEG-- 90 (352)
T ss_dssp CCSCCCCCSHHHHHHHHHTHHHHHHHHHHHHTTHHHHTT---SCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET--
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCChHHHhC---CCCCHHHHHHHhCcChHHHHHHHHHHHHCCCeEecC--
Confidence 445566677777999999999999999999999999996 499999999999999999999999999999999987
Q ss_pred CCCceEecCcccc-hhhcCCCcchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChHHHHHHHHH
Q 018565 89 QGSMAFQQTPLSR-RLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDA 167 (354)
Q Consensus 89 ~~~~~y~~t~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 167 (354)
+.|++|+.++ ++.++.|.+++.++.+. ...+..|.+|+++++++.+.+|... .++.++++....|..+
T Consensus 91 ---~~y~~t~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~~------~~~~~~~~~~~~f~~~ 159 (352)
T 3mcz_A 91 ---DAFRNTALTERYLTTTSADYIGPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQE------SRFAHDTRARDAFNDA 159 (352)
T ss_dssp ---TEEEECHHHHHHHSTTCTTCCHHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSHH------HHTTTCHHHHHHHHHH
T ss_pred ---CeeecCHHHHhhccCCChhhHHHHHHHh--HHHHHHHHHHHHHHhCCCCCCcccc------cccccCHHHHHHHHHH
Confidence 7899999997 77777888888887654 3467899999999999976544322 2346788888999999
Q ss_pred hhhchhhhHHHHHhcCCCccCC-CceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeec
Q 018565 168 MACDTRLAMRAIIEGCPEVFDG-IETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGG 239 (354)
Q Consensus 168 m~~~~~~~~~~~~~~~~~~~~~-~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~ 239 (354)
|...... ...+++.++ +.+ ..+|||||||+|.++..+++++|+.+++++|++++++.+++ .++++++.+
T Consensus 160 m~~~~~~-~~~~l~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~ 236 (352)
T 3mcz_A 160 MVRLSQP-MVDVVSELG--VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEK 236 (352)
T ss_dssp HHHHHHH-HHHHHHTCG--GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEEC
T ss_pred HHhhhhh-HHHHHHhCC--CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeC
Confidence 9873332 246788888 656 89999999999999999999999999999999888887764 358999999
Q ss_pred CCCC-C--CCc-ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhccc
Q 018565 240 DMFD-G--VPE-ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHT 315 (354)
Q Consensus 240 d~~~-~--~~~-~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 315 (354)
|+++ + .++ ||+|++.+++|+|+++++.++|++++++|+| ||+++|.|.+.++... .+ .....+++.++..+
T Consensus 237 d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~-~~---~~~~~~~~~~~~~~ 311 (352)
T 3mcz_A 237 NLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKP-GGALLILTMTMNDDRV-TP---ALSADFSLHMMVNT 311 (352)
T ss_dssp CTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEE-EEEEEEEEECCCTTSS-SS---HHHHHHHHHHHHHS
T ss_pred CcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCC-CCEEEEEEeccCCCCC-CC---chHHHhhHHHHhhC
Confidence 9998 4 554 9999999999999999999999999999999 9999999999877654 21 23456788887654
Q ss_pred CCcccCCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 316 NKGKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 316 ~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
.+++.++.++|.++|+++||++++.. .+..+++.++|
T Consensus 312 ~~~~~~t~~e~~~ll~~aGf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 312 NHGELHPTPWIAGVVRDAGLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp TTCCCCCHHHHHHHHHHTTCEEEEEE--ETTEEEEEEEC
T ss_pred CCCCcCCHHHHHHHHHHCCCceeeec--cCceEEEEEec
Confidence 68899999999999999999999843 35577888775
No 15
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=4.2e-45 Score=340.52 Aligned_cols=317 Identities=15% Similarity=0.268 Sum_probs=273.0
Q ss_pred eecccccchHHHHHHHHHh-hhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 8 VMMKKEEDDAKVEIWKYVF-GFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 8 ~~~~~~~~~~~~~l~~~~~-~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
-|.+.++.+...++++++. +++.+++|++++++|||+.|.+ +|.|++|||+++|++++.++||||+|++.|+|++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~lgif~~L~~--~~~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~ 98 (359)
T 1x19_A 21 MMSNNDLLNYYHRANELVFKGLIEFSCMKAAIELDLFSHMAE--GPKDLATLAADTGSVPPRLEMLLETLRQMRVINLED 98 (359)
T ss_dssp EECCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTHHHHHTT--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET
T ss_pred cCCccccCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHcC--CCCCHHHHHHHhCcChHHHHHHHHHHHhCCCeEeeC
Confidence 4667778888999999996 8999999999999999999986 799999999999999999999999999999999986
Q ss_pred CCCCCceEecCcc-cchhhcCCC---cchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChH---
Q 018565 87 TSQGSMAFQQTPL-SRRLMRHGE---NNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAA--- 159 (354)
Q Consensus 87 ~~~~~~~y~~t~~-~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~--- 159 (354)
+.|++|+. ++++.++++ .++++++.+. ....++.|.+|+++++++.+ |+++.++|+
T Consensus 99 -----~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~l~~g~~-----------~~~~~~~p~~~~ 161 (359)
T 1x19_A 99 -----GKWSLTEFADYMFSPTPKEPNLHQTPVAKAM-AFLADDFYMGLSQAVRGQKN-----------FKGQVPYPPVTR 161 (359)
T ss_dssp -----TEEEECHHHHHHSSSSCSBTTBCCHHHHHHH-HHHHHHTGGGHHHHHTTSCC-----------CCCSSCSSCCSH
T ss_pred -----CeEecCHHHHHHhcCCCCCccccHHHHHHHH-HHHHHHHHHHHHHHHhcCCC-----------CcccccCchhhH
Confidence 79999996 468888877 7888888775 34678899999999998863 455667777
Q ss_pred HHHHHHHHhhhchh-hhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------C
Q 018565 160 HSKLINDAMACDTR-LAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------C 231 (354)
Q Consensus 160 ~~~~~~~~m~~~~~-~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~ 231 (354)
....|...|..... ...+.+++.++ +.+..+|||||||+|.++..+++++|+.+++++|++.+++.+++ .
T Consensus 162 ~~~~f~~~m~~~~~~~~~~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~ 239 (359)
T 1x19_A 162 EDNLYFEEIHRSNAKFAIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVA 239 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHCC--CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHhccchhHHHHHHhcC--CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCC
Confidence 88899999998887 77788888888 77889999999999999999999999999999999888887764 3
Q ss_pred CCeEEeecCCCC-CCCcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHH
Q 018565 232 HGVEHVGGDMFD-GVPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMV 310 (354)
Q Consensus 232 ~~v~~~~~d~~~-~~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~ 310 (354)
++++++.+|+++ +++++|+|++.+++|+|+++.+.++|++++++||| ||+++|+|...++... . . ....+ .
T Consensus 240 ~~v~~~~~d~~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~-~--~--~~~~~--~ 311 (359)
T 1x19_A 240 DRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRS-GGRLLILDMVIDDPEN-P--N--FDYLS--H 311 (359)
T ss_dssp TTEEEEECCTTTSCCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT-TCEEEEEEECCCCTTS-C--C--HHHHH--H
T ss_pred CCEEEEeCccccCCCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCC-CCEEEEEecccCCCCC-c--h--HHHHH--H
Confidence 579999999998 67778999999999999999899999999999999 9999999988776522 1 1 12222 3
Q ss_pred hhcccCCccc----CCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 311 MMAHTNKGKE----RSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 311 ~~~~~~~g~~----~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
++....+++. ++.++|.++|+++||+.+++++.+ ..++|+++|
T Consensus 312 ~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 312 YILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp HGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred HHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEecC-CceEEEEeC
Confidence 3333245666 999999999999999999999988 888999986
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=7.3e-45 Score=335.80 Aligned_cols=317 Identities=20% Similarity=0.258 Sum_probs=273.5
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 18 KVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 18 ~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
+.++++++.+++.+++|++++++|||+.|.+ +|.|++|||+++|++++.++|||++|++.|+|++.+ +.|++|
T Consensus 7 ~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~l~~~~-----~~y~~t 79 (335)
T 2r3s_A 7 PALFFNTVNAYQRSAAIKAAVELNVFTAISQ--GIESSQSLAQKCQTSERGMRMLCDYLVIIGFMTKQA-----EGYRLT 79 (335)
T ss_dssp SHHHHHHHTTHHHHHHHHHHHHTTHHHHHTT--SEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-----TEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHhCCCchHHHHHHHHHHhcCCeEecC-----CEEecC
Confidence 4679999999999999999999999999986 799999999999999999999999999999998754 899999
Q ss_pred ccc-chhhcCCCcchHHHHHHhcCchhhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChHHHHHHHHHhhhchhhhH
Q 018565 98 PLS-RRLMRHGENNMAAFILLESSPVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAM 176 (354)
Q Consensus 98 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~~~~~~ 176 (354)
+.+ +++.++++.+++.++.+..++..+..|.+|.++++++.+ ++. . |+++.++++....|...|........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (335)
T 2r3s_A 80 SDSAMFLDRQSKFYVGDAIEFLLSPMITNGFNDLTAAVLKGGT-AIS-----S-EGTLSPEHPVWVQFAKAMSPMMANPA 152 (335)
T ss_dssp HHHHHHTCTTSTTCCGGGHHHHTCHHHHGGGTTHHHHHHHTSC-CST-----T-TGGGSTTCTHHHHHHHHSGGGGHHHH
T ss_pred HHHHHHhccCCcHHHHHHHHHhcchhhHHHHHhHHHHHhcCCC-CCC-----C-cccccCCHHHHHHHHHHHHHHHhhhH
Confidence 999 688888877888888777554678899999999999863 443 3 78888888899999999988877767
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCC-CCCc-
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFD-GVPE- 247 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~-~~~~- 247 (354)
..+++.+++.+.+..+|||||||+|.++..+++++|+.+++++|++.+++.+++ .++++++.+|+++ ++++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 232 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGND 232 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCC
Confidence 778887771117789999999999999999999999999999999888877764 3579999999998 6664
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHH
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWD 327 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~ 327 (354)
||+|++.+++|+|+++++.++|++++++|+| ||+++|.|...++... .+ .....+++.++..+.+++.++.++|.
T Consensus 233 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p-gG~l~i~e~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~t~~~~~ 307 (335)
T 2r3s_A 233 YDLVLLPNFLHHFDVATCEQLLRKIKTALAV-EGKVIVFDFIPNSDRI-TP---PDAAAFSLVMLATTPNGDAYTFAEYE 307 (335)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEECCCCTTSS-CS---HHHHHHHHHHHHHSSSCCCCCHHHHH
T ss_pred CcEEEEcchhccCCHHHHHHHHHHHHHhCCC-CcEEEEEeecCCCCcC-Cc---hHHHHHHHHHHeeCCCCCcCCHHHHH
Confidence 9999999999999999999999999999999 9999999998776433 21 23456777777664478999999999
Q ss_pred HHHHHcCCceeEEEEcCCceeEEEEe
Q 018565 328 YVLRQAGFSRYNITSIHAVQSLIEAF 353 (354)
Q Consensus 328 ~ll~~aGf~~~~~~~~~~~~~~i~~~ 353 (354)
++++++||+.+++.+.++..++|+++
T Consensus 308 ~ll~~aGf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 308 SMFSNAGFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp HHHHHTTCSEEEEECCTTSSSEEEEE
T ss_pred HHHHHCCCCeeeEEECCCCceeEEEe
Confidence 99999999999999998888877765
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.87 E-value=1.9e-21 Score=172.37 Aligned_cols=165 Identities=16% Similarity=0.194 Sum_probs=123.9
Q ss_pred cCCCceEEEecCCccHHHHHHHHHC--CCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCCcceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAF--PRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVPEADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~~~D~i~~~~ 255 (354)
.+++.+|||||||+|..+..+++++ |+++++++|+ +.+++.|++ ..+|+++.+|+.+ ++++||+|++..
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 3577899999999999999999875 6789999999 999998874 4689999999998 788899999999
Q ss_pred ccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhh-ccc------------CCcccCC
Q 018565 256 VLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMM-AHT------------NKGKERS 322 (354)
Q Consensus 256 ~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~-~~~------------~~g~~~t 322 (354)
++|++++++..++|++++++||| ||.+++.|...+.+.. ..... .....++... ... ..-...|
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~Lkp-GG~lii~e~~~~~~~~-~~~~~-~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s 224 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNP-GGALVLSEKFSFEDAK-VGELL-FNMHHDFKRANGYSELEISQKRSMLENVMLTDS 224 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEBCCSSHH-HHHHH-HHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBC
T ss_pred eeeecCchhHhHHHHHHHHHcCC-CcEEEEEeccCCCCHH-HHHHH-HHHHHHHHHHcCCCHHHHHHHHhhhcccccCCC
Confidence 99999998888999999999999 9999999987765432 10000 0000010000 000 0013468
Q ss_pred HHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 323 LKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 323 ~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
.+++.++|+++||+.++++--..++..+.|+|
T Consensus 225 ~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 225 VETHKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp HHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 89999999999999998875444444455554
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.83 E-value=2.1e-19 Score=156.65 Aligned_cols=174 Identities=13% Similarity=0.138 Sum_probs=129.7
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CCC-cce
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GVP-EAD 249 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~-~~D 249 (354)
..+...+. ...++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||
T Consensus 33 ~~~~~~~~-~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD 111 (234)
T 3dtn_A 33 GVSVSIAS-VDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYD 111 (234)
T ss_dssp HHHHHTCC-CSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEE
T ss_pred HHHHHHhh-cCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCce
Confidence 34444444 134678999999999999999999999999999999 888888765 3489999999998 544 599
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccH-----------Hh-hcccCC
Q 018565 250 AAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDM-----------VM-MAHTNK 317 (354)
Q Consensus 250 ~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l-----------~~-~~~~~~ 317 (354)
+|++..++|+++++...++|++++++||| ||.+++.+...+.... ..... ...+... .. ......
T Consensus 112 ~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (234)
T 3dtn_A 112 MVVSALSIHHLEDEDKKELYKRSYSILKE-SGIFINADLVHGETAF-IENLN-KTIWRQYVENSGLTEEEIAAGYERSKL 188 (234)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEECBCSSHH-HHHHH-HHHHHHHHHTSSCCHHHHHTTC----C
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCC-CcEEEEEEecCCCChh-hhhHH-HHHHHHHHHhcCCCHHHHHHHHHhccc
Confidence 99999999999988888899999999999 9999999987654322 10000 0000000 00 000022
Q ss_pred cccCCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 318 GKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 318 g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
...++.+++.++|+++||+.++++......+++...|
T Consensus 189 ~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~ 225 (234)
T 3dtn_A 189 DKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRK 225 (234)
T ss_dssp CCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEEC
T ss_pred ccccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEe
Confidence 3556899999999999999999988877777666543
No 19
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.78 E-value=3.1e-18 Score=147.57 Aligned_cols=155 Identities=18% Similarity=0.195 Sum_probs=124.9
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CCC-
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GVP- 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~- 246 (354)
..++..+. ..+..+|||+|||+|.++..+++.. |..+++++|+ +.+++.+++ ..++++..+|+.+ +++
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 34444444 5677899999999999999999986 8889999999 888887765 2589999999988 544
Q ss_pred -cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHH
Q 018565 247 -EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKE 325 (354)
Q Consensus 247 -~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e 325 (354)
.||+|++..++|++++. ..+|++++++|+| ||.+++.+........ .. .....++.++
T Consensus 105 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~-~~-----------------~~~~~~~~~~ 163 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEP--LKFLEELKRVAKP-FAYLAIIDWKKEERDK-GP-----------------PPEEVYSEWE 163 (219)
T ss_dssp SCEEEEEEESCGGGCSSH--HHHHHHHHHHEEE-EEEEEEEEECSSCCSS-SC-----------------CGGGSCCHHH
T ss_pred CCeeEEEeehhhhhcCCH--HHHHHHHHHHhCC-CeEEEEEEeccccccc-CC-----------------chhcccCHHH
Confidence 49999999999998754 5899999999999 9999999876554332 11 1123458999
Q ss_pred HHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 326 WDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 326 ~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
|.++++++||+++++...+.....+.++|
T Consensus 164 ~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 164 VGLILEDAGIRVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp HHHHHHHTTCEEEEEEEETTTEEEEEEEC
T ss_pred HHHHHHHCCCEEEEEEeeCCceEEEEEEe
Confidence 99999999999999999887777666654
No 20
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.77 E-value=1.5e-18 Score=150.32 Aligned_cols=160 Identities=14% Similarity=0.051 Sum_probs=116.5
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC--cceEEEecccccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP--EADAAIIKWVLHD 259 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~ 259 (354)
+..+|||+|||+|.++..+++..+ +++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 468999999999999999999876 8999999 888888765 3789999999988 544 4999999999777
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhh---cc-----------------cCCcc
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMM---AH-----------------TNKGK 319 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~---~~-----------------~~~g~ 319 (354)
+..++..+++++++++|+| ||.+++.+...+.... .. ...........+. .. .....
T Consensus 116 ~~~~~~~~~l~~~~~~L~~-gG~l~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKP-SGKFIMYFTDLRELLP-RL-KESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFN 192 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEE-EEEEEEEEECHHHHGG-GC-CC---------CCEEEEETTTTEEEEEC-----CCEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCC-CcEEEEEecChHHHHH-HH-HhhhhcccceeecccccCccccEEEEEeccchhhheeehh
Confidence 7777788999999999999 9999998765321110 00 0000000000000 00 00011
Q ss_pred cCCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 320 ERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 320 ~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
.++ .+|.++|+++||+.+++.+++...++|+.+|
T Consensus 193 ~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 193 VWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp CCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred hhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 122 4899999999999999999988888999876
No 21
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.77 E-value=9.9e-19 Score=150.35 Aligned_cols=168 Identities=19% Similarity=0.202 Sum_probs=119.5
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC-
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP- 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~- 246 (354)
..+++.++ ..+. +|||||||+|.++..+++. |+.+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 34 ~~~~~~~~--~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 34 ENIINRFG--ITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHHHC--CCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT
T ss_pred HHHHHhcC--CCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc
Confidence 34444444 3344 9999999999999999998 8889999999 888887765 3589999999988 654
Q ss_pred -cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhh-ccHHhhcccCCcccCCHH
Q 018565 247 -EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLM-LDMVMMAHTNKGKERSLK 324 (354)
Q Consensus 247 -~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~g~~~t~~ 324 (354)
.||+|++..++|++++. ..+|++++++|+| ||.+++.+...+.... .......... ........ .....++.+
T Consensus 110 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 184 (219)
T 3dlc_A 110 NYADLIVSRGSVFFWEDV--ATAFREIYRILKS-GGKTYIGGGFGNKELR-DSISAEMIRKNPDWKEFNR-KNISQENVE 184 (219)
T ss_dssp TCEEEEEEESCGGGCSCH--HHHHHHHHHHEEE-EEEEEEEECCSSHHHH-HHHHHHHHHHCTTHHHHHH-HHSSHHHHH
T ss_pred ccccEEEECchHhhccCH--HHHHHHHHHhCCC-CCEEEEEeccCcHHHH-HHHHHHHHHhHHHHHhhhh-hccccCCHH
Confidence 49999999999998654 5899999999999 9999998754332111 0000000000 00000000 112345789
Q ss_pred HHHHHHHHcCCceeEEEEcCCceeEEEEe
Q 018565 325 EWDYVLRQAGFSRYNITSIHAVQSLIEAF 353 (354)
Q Consensus 325 e~~~ll~~aGf~~~~~~~~~~~~~~i~~~ 353 (354)
+|.++|+++||+.+++.......+++...
T Consensus 185 ~~~~~l~~aGf~~v~~~~~~~~~~~~~~k 213 (219)
T 3dlc_A 185 RFQNVLDEIGISSYEIILGDEGFWIIISK 213 (219)
T ss_dssp HHHHHHHHHTCSSEEEEEETTEEEEEEBC
T ss_pred HHHHHHHHcCCCeEEEEecCCceEEEEec
Confidence 99999999999999999887776665543
No 22
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.76 E-value=3.4e-18 Score=147.44 Aligned_cols=158 Identities=15% Similarity=0.215 Sum_probs=117.1
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--CCCeEEeecCCCC-CCC-cceEEEeccccccCC
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--CHGVEHVGGDMFD-GVP-EADAAIIKWVLHDWG 261 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~-~~~-~~D~i~~~~~lh~~~ 261 (354)
..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++++..+|+.+ +.+ .||+|++..++|+++
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEEESCGGGSC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEECcchhcCC
Confidence 346789999999999999999987 679999999 888888876 2489999999998 554 599999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhc---cHH--hhcccCCcccCCHHHHHHHHHHcCCc
Q 018565 262 DDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLML---DMV--MMAHTNKGKERSLKEWDYVLRQAGFS 336 (354)
Q Consensus 262 ~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~---~l~--~~~~~~~g~~~t~~e~~~ll~~aGf~ 336 (354)
++....+|++++++||| ||.+++.+...+.... ........ ... .... .....++.++|.++|+++||+
T Consensus 121 ~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf~ 194 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNK-GGKIVFADTIFADQDA----YDKTVEAAKQRGFHQLANDL-QTEYYTRIPVMQTIFENNGFH 194 (220)
T ss_dssp HHHHHHHHHHHHHHSCT-TCEEEEEEECBSSHHH----HHHHHHHHHHTTCHHHHHHH-HHSCCCBHHHHHHHHHHTTEE
T ss_pred hHHHHHHHHHHHHhcCC-CCEEEEEeccccChHH----HHHHHHHHHhCCCccchhhc-chhhcCCHHHHHHHHHHCCCE
Confidence 98877899999999999 9999999866543221 00000000 000 0000 011334889999999999998
Q ss_pred eeEEEEcCCceeEEEEe
Q 018565 337 RYNITSIHAVQSLIEAF 353 (354)
Q Consensus 337 ~~~~~~~~~~~~~i~~~ 353 (354)
++.+.. ....+++.+.
T Consensus 195 v~~~~~-~~~~w~~~~~ 210 (220)
T 3hnr_A 195 VTFTRL-NHFVWVMEAT 210 (220)
T ss_dssp EEEEEC-SSSEEEEEEE
T ss_pred EEEeec-cceEEEEeeh
Confidence 776544 4666666654
No 23
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.76 E-value=9.6e-18 Score=148.70 Aligned_cols=155 Identities=13% Similarity=0.234 Sum_probs=123.2
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CCC--cc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GVP--EA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~--~~ 248 (354)
..+++.+. ..++.+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .|
T Consensus 45 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 121 (266)
T 3ujc_A 45 KKILSDIE--LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNF 121 (266)
T ss_dssp HHHTTTCC--CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCE
T ss_pred HHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcE
Confidence 45566665 6678899999999999999999987 679999999 888888775 2689999999988 554 49
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHH
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDY 328 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ 328 (354)
|+|++..++|++++++...+|++++++||| ||.+++.+...+.... . . ...... ... .+...++.++|.+
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~-~---~--~~~~~~--~~~-~~~~~~~~~~~~~ 191 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKP-TGTLLITDYCATEKEN-W---D--DEFKEY--VKQ-RKYTLITVEEYAD 191 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEEESCGGG-C---C--HHHHHH--HHH-HTCCCCCHHHHHH
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCC-CCEEEEEEeccCCccc-c---h--HHHHHH--Hhc-CCCCCCCHHHHHH
Confidence 999999999999888889999999999999 9999999987665222 1 0 011111 111 2335678999999
Q ss_pred HHHHcCCceeEEEEcC
Q 018565 329 VLRQAGFSRYNITSIH 344 (354)
Q Consensus 329 ll~~aGf~~~~~~~~~ 344 (354)
+++++||+++++....
T Consensus 192 ~l~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 192 ILTACNFKNVVSKDLS 207 (266)
T ss_dssp HHHHTTCEEEEEEECH
T ss_pred HHHHcCCeEEEEEeCC
Confidence 9999999999887653
No 24
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.75 E-value=2.3e-17 Score=141.83 Aligned_cols=151 Identities=19% Similarity=0.093 Sum_probs=110.9
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--CCCeEEeecCCCCCC--CcceEEEeccccccCC
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--CHGVEHVGGDMFDGV--PEADAAIIKWVLHDWG 261 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~~~--~~~D~i~~~~~lh~~~ 261 (354)
..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+.. ..||+|++..++|+++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCC
Confidence 345679999999999999999998 669999999 888888876 378999999998843 3599999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCC-------cccCCHHHHHHHHHHcC
Q 018565 262 DDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNK-------GKERSLKEWDYVLRQAG 334 (354)
Q Consensus 262 ~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------g~~~t~~e~~~ll~~aG 334 (354)
++....+|++++++|+| ||.+++.+...+.... ...+. ........... .. ....+.++|.++++++|
T Consensus 122 ~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~aG 196 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAP-GGVVEFVDVTDHERRL-EQQDD--SEPEVAVRRTL-QDGRSFRIVKVFRSPAELTERLTALG 196 (218)
T ss_dssp HHHHHHHHHHHHHHEEE-EEEEEEEEECCCC---------------CEEEEEC-TTSCEEEEECCCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCC-CeEEEEEeCCCCcccc-chhhh--cccccceeeec-CCcchhhHhhcCCCHHHHHHHHHHCC
Confidence 98888999999999999 9999999876643221 10000 00000000000 11 12458999999999999
Q ss_pred CceeEEEEcC
Q 018565 335 FSRYNITSIH 344 (354)
Q Consensus 335 f~~~~~~~~~ 344 (354)
|++......+
T Consensus 197 f~v~~~~~~~ 206 (218)
T 3ou2_A 197 WSCSVDEVHP 206 (218)
T ss_dssp EEEEEEEEET
T ss_pred CEEEeeeccc
Confidence 9955444434
No 25
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.75 E-value=2.5e-17 Score=146.79 Aligned_cols=156 Identities=17% Similarity=0.153 Sum_probs=121.4
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC-
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP- 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~- 246 (354)
..+++.++ ..+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 51 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 51 DEMIALLD--VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHSC--CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 45556666 6678899999999999999999987 689999999 888877764 3579999999988 654
Q ss_pred -cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHH
Q 018565 247 -EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKE 325 (354)
Q Consensus 247 -~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e 325 (354)
.||+|++..++|++++. ..+|++++++||| ||++++.+........ .. .....+...... ..+..++.++
T Consensus 128 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~p-gG~l~i~~~~~~~~~~-~~----~~~~~~~~~~~~-~~~~~~~~~~ 198 (273)
T 3bus_A 128 ASFDAVWALESLHHMPDR--GRALREMARVLRP-GGTVAIADFVLLAPVE-GA----KKEAVDAFRAGG-GVLSLGGIDE 198 (273)
T ss_dssp TCEEEEEEESCTTTSSCH--HHHHHHHHTTEEE-EEEEEEEEEEESSCCC-HH----HHHHHHHHHHHH-TCCCCCCHHH
T ss_pred CCccEEEEechhhhCCCH--HHHHHHHHHHcCC-CeEEEEEEeeccCCCC-hh----HHHHHHHHHhhc-CccCCCCHHH
Confidence 49999999999998765 5899999999999 9999999987654332 10 111111111111 3556789999
Q ss_pred HHHHHHHcCCceeEEEEcC
Q 018565 326 WDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 326 ~~~ll~~aGf~~~~~~~~~ 344 (354)
|.++++++||+++++...+
T Consensus 199 ~~~~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 199 YESDVRQAELVVTSTVDIS 217 (273)
T ss_dssp HHHHHHHTTCEEEEEEECH
T ss_pred HHHHHHHcCCeEEEEEECc
Confidence 9999999999999887753
No 26
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.75 E-value=7.1e-18 Score=149.65 Aligned_cols=163 Identities=15% Similarity=0.173 Sum_probs=118.5
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCC-cceEEEecc-ccccCCh
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVP-EADAAIIKW-VLHDWGD 262 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~-~~D~i~~~~-~lh~~~~ 262 (354)
.+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++.. ++|++++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCH
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCC
Confidence 356899999999999999999874 48999999 889988876 5689999999998 544 499999997 9999865
Q ss_pred -HHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchh--------------------hhhhhccHHhhcccCC----
Q 018565 263 -DECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFK--------------------SVRLMLDMVMMAHTNK---- 317 (354)
Q Consensus 263 -~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~--------------------~~~~~~~l~~~~~~~~---- 317 (354)
++..++|++++++||| ||.+++.+...+.... ..... .....+++.+.....+
T Consensus 127 ~~~~~~~l~~~~~~L~p-gG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (263)
T 3pfg_A 127 QAELDAALERFAAHVLP-DGVVVVEPWWFPENFT-PGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGIT 204 (263)
T ss_dssp HHHHHHHHHHHHHTEEE-EEEEEECCCCCTTTCC-TTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEE
T ss_pred HHHHHHHHHHHHHhcCC-CcEEEEEeccChhhcc-ccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEE
Confidence 5678999999999999 9999986544333211 10000 0000111111111011
Q ss_pred -------cccCCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 318 -------GKERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 318 -------g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
.+.+|.++|.++|+++||+++++...+....++.++|
T Consensus 205 ~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 205 HHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence 2456899999999999999999877776666666654
No 27
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.74 E-value=1.2e-17 Score=147.88 Aligned_cols=154 Identities=16% Similarity=0.311 Sum_probs=116.8
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CCC-
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GVP- 246 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~- 246 (354)
...+++.+. ..+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 26 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 26 LAKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp HHHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCT
T ss_pred HHHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCC
Confidence 344555555 56778999999999999999999865 8999999 888888764 2679999999988 665
Q ss_pred -cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccH-HhhcccCCcccCCHH
Q 018565 247 -EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDM-VMMAHTNKGKERSLK 324 (354)
Q Consensus 247 -~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~g~~~t~~ 324 (354)
.||+|++..++|++++. ..+|++++++||| ||++++.+...+.... ...+... ...........++.+
T Consensus 102 ~~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lkp-gG~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 171 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNP--ASFVSEAYRVLKK-GGQLLLVDNSAPENDA-------FDVFYNYVEKERDYSHHRAWKKS 171 (260)
T ss_dssp TCEEEEEEESCGGGCSCH--HHHHHHHHHHEEE-EEEEEEEEEEBCSSHH-------HHHHHHHHHHHHCTTCCCCCBHH
T ss_pred CCEEEEEEhhhhHhcCCH--HHHHHHHHHHcCC-CCEEEEEEcCCCCCHH-------HHHHHHHHHHhcCccccCCCCHH
Confidence 49999999999999875 4899999999999 9999999877654321 1111111 111111234567899
Q ss_pred HHHHHHHHcCCceeEEEEc
Q 018565 325 EWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 325 e~~~ll~~aGf~~~~~~~~ 343 (354)
+|.++|+++||+++++...
T Consensus 172 ~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 172 DWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp HHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEEe
Confidence 9999999999998887654
No 28
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.74 E-value=1.1e-17 Score=147.43 Aligned_cols=149 Identities=19% Similarity=0.274 Sum_probs=118.3
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CCC--cc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GVP--EA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~--~~ 248 (354)
..++..++ ..+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .|
T Consensus 83 ~~~l~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 83 RNFIASLP--GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTY 159 (254)
T ss_dssp HHHHHTST--TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCE
T ss_pred HHHHHhhc--ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCe
Confidence 45555555 5677899999999999999999876 457999999 888888775 2679999999987 544 49
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHH
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDY 328 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ 328 (354)
|+|++.+++|++++++..++|++++++||| ||.+++.+........ ..+. . .....++.++|.+
T Consensus 160 D~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~----------~~~~----~-~~~~~~~~~~~~~ 223 (254)
T 1xtp_A 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTP-NGYIFFKENCSTGDRF----------LVDK----E-DSSLTRSDIHYKR 223 (254)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEBC--CCE----------EEET----T-TTEEEBCHHHHHH
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCC-CeEEEEEecCCCcccc----------eecc----c-CCcccCCHHHHHH
Confidence 999999999999988889999999999999 9999998865433221 0110 0 2234678999999
Q ss_pred HHHHcCCceeEEEEcC
Q 018565 329 VLRQAGFSRYNITSIH 344 (354)
Q Consensus 329 ll~~aGf~~~~~~~~~ 344 (354)
+|+++||+++++....
T Consensus 224 ~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 224 LFNESGVRVVKEAFQE 239 (254)
T ss_dssp HHHHHTCCEEEEEECT
T ss_pred HHHHCCCEEEEeeecC
Confidence 9999999999987654
No 29
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.74 E-value=3.9e-17 Score=146.72 Aligned_cols=162 Identities=10% Similarity=0.111 Sum_probs=121.3
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCCCcc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGVPEA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~~~~ 248 (354)
..+++.++ ..++.+|||||||+|.++..++++++ .+++++|+ +++++.+++ .+++++..+|+.+-.+.|
T Consensus 54 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~f 130 (287)
T 1kpg_A 54 DLALGKLG--LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPV 130 (287)
T ss_dssp HHHHTTTT--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCC
T ss_pred HHHHHHcC--CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCe
Confidence 45555565 66788999999999999999997764 49999999 888887764 358999999997622569
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCC---Ccchh-hhhhhcc-HHhhcccCCcccCCH
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGV---DNKFK-SVRLMLD-MVMMAHTNKGKERSL 323 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~---~~~~~-~~~~~~~-l~~~~~~~~g~~~t~ 323 (354)
|+|++..++|++++++...+|++++++||| ||.+++.+...+..... ..+.. ......+ +..... .++..++.
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~ 208 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPA-DGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIF-PGGRLPSI 208 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCT-TCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTS-TTCCCCCH
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCC-CCEEEEEEecCCCccccccccccccccccchhhhHHheeC-CCCCCCCH
Confidence 999999999999877778999999999999 99999998776532100 00000 0001111 111122 55677899
Q ss_pred HHHHHHHHHcCCceeEEEEc
Q 018565 324 KEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 324 ~e~~~ll~~aGf~~~~~~~~ 343 (354)
+++.++++++||+++++...
T Consensus 209 ~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 209 PMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp HHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHhCCcEEEEEEeC
Confidence 99999999999999998765
No 30
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.74 E-value=5.1e-17 Score=146.70 Aligned_cols=145 Identities=14% Similarity=0.188 Sum_probs=114.5
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC--cceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP--EADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~--~~D~i~~~~ 255 (354)
+.+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 5677899999999999999999986 469999999 888887764 3689999999988 654 499999999
Q ss_pred ccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCC
Q 018565 256 VLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGF 335 (354)
Q Consensus 256 ~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf 335 (354)
++|++++ ...+|++++++||| ||++++.+...+.... .. ....+.... ......+.++|.++++++||
T Consensus 159 ~l~~~~~--~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-~~------~~~~~~~~~--~~~~~~~~~~~~~~l~~aGf 226 (297)
T 2o57_A 159 AFLHSPD--KLKVFQECARVLKP-RGVMAITDPMKEDGID-KS------SIQPILDRI--KLHDMGSLGLYRSLAKECGL 226 (297)
T ss_dssp CGGGCSC--HHHHHHHHHHHEEE-EEEEEEEEEEECTTCC-GG------GGHHHHHHH--TCSSCCCHHHHHHHHHHTTE
T ss_pred hhhhcCC--HHHHHHHHHHHcCC-CeEEEEEEeccCCCCc-hH------HHHHHHHHh--cCCCCCCHHHHHHHHHHCCC
Confidence 9999987 46899999999999 9999999987665433 11 111111111 12235689999999999999
Q ss_pred ceeEEEEcC
Q 018565 336 SRYNITSIH 344 (354)
Q Consensus 336 ~~~~~~~~~ 344 (354)
+++++..+.
T Consensus 227 ~~~~~~~~~ 235 (297)
T 2o57_A 227 VTLRTFSRP 235 (297)
T ss_dssp EEEEEEECH
T ss_pred eEEEEEECc
Confidence 999987753
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.73 E-value=4.3e-17 Score=143.83 Aligned_cols=152 Identities=13% Similarity=0.106 Sum_probs=117.1
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC-
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP- 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~- 246 (354)
..++..+. ..+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .++++++.+|+.+ +.+
T Consensus 26 ~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 26 ATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 44555555 6678899999999999999999987 678999999 888888764 2589999999988 443
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHH
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEW 326 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~ 326 (354)
.||+|++..++|++++. .++|++++++||| ||++++.+........ .. ... ... ... .....++.++|
T Consensus 103 ~fD~V~~~~~~~~~~~~--~~~l~~~~r~Lkp-gG~l~~~~~~~~~~~~-~~---~~~---~~~-~~~-~~~~~~~~~~~ 170 (256)
T 1nkv_A 103 KCDVAACVGATWIAGGF--AGAEELLAQSLKP-GGIMLIGEPYWRQLPA-TE---EIA---QAC-GVS-STSDFLTLPGL 170 (256)
T ss_dssp CEEEEEEESCGGGTSSS--HHHHHHHTTSEEE-EEEEEEEEEEETTCCS-SH---HHH---HTT-TCS-CGGGSCCHHHH
T ss_pred CCCEEEECCChHhcCCH--HHHHHHHHHHcCC-CeEEEEecCcccCCCC-hH---HHH---HHH-hcc-cccccCCHHHH
Confidence 49999999999998754 5889999999999 9999999987654432 11 000 000 001 22356789999
Q ss_pred HHHHHHcCCceeEEEEc
Q 018565 327 DYVLRQAGFSRYNITSI 343 (354)
Q Consensus 327 ~~ll~~aGf~~~~~~~~ 343 (354)
.++++++||+.+++...
T Consensus 171 ~~~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 171 VGAFDDLGYDVVEMVLA 187 (256)
T ss_dssp HHHHHTTTBCCCEEEEC
T ss_pred HHHHHHCCCeeEEEEeC
Confidence 99999999999887654
No 32
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.73 E-value=1.4e-16 Score=144.98 Aligned_cols=163 Identities=11% Similarity=0.063 Sum_probs=122.4
Q ss_pred hhhchhhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeec
Q 018565 168 MACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGG 239 (354)
Q Consensus 168 m~~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~ 239 (354)
+..........+++.++ ...+..+|||||||+|.++..+++++ +.+++++|+ +.+++.+++ .++++++.+
T Consensus 97 ~~~~~~~~~~~l~~~l~-~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 174 (312)
T 3vc1_A 97 LHRLESAQAEFLMDHLG-QAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC 174 (312)
T ss_dssp HHHHHHHHHHHHHTTSC-CCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred hhhHHHHHHHHHHHHhc-cCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 33333334455666655 24577899999999999999999985 578999999 888887764 358999999
Q ss_pred CCCC-CCC--cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccC
Q 018565 240 DMFD-GVP--EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTN 316 (354)
Q Consensus 240 d~~~-~~~--~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 316 (354)
|+.+ +++ .||+|++..++|+++ ..++|++++++||| ||++++.+........ .. ... ...+....
T Consensus 175 d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-~~--~~~--~~~~~~~~--- 242 (312)
T 3vc1_A 175 NMLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHSRFLKV-GGRYVTITGCWNPRYG-QP--SKW--VSQINAHF--- 242 (312)
T ss_dssp CTTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEE-EEEEEEEEEEECTTTC-SC--CHH--HHHHHHHH---
T ss_pred ChhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHHHHcCC-CcEEEEEEcccccccc-ch--hHH--HHHHHhhh---
Confidence 9998 654 499999999999985 66899999999999 9999999987765432 10 001 11111111
Q ss_pred CcccCCHHHHHHHHHHcCCceeEEEEcC
Q 018565 317 KGKERSLKEWDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 317 ~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 344 (354)
....++.++|.++++++||+++++..++
T Consensus 243 ~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 243 ECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp TCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred cCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 1136789999999999999999987753
No 33
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.72 E-value=8.1e-17 Score=145.83 Aligned_cols=160 Identities=15% Similarity=0.201 Sum_probs=123.5
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCCCcc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGVPEA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~~~~ 248 (354)
..+++.+. ..++.+|||||||+|.++..+++.++ .+++++|+ +.+++.+++ .+++++..+|+.+-...|
T Consensus 62 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 138 (302)
T 3hem_A 62 KLALDKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPV 138 (302)
T ss_dssp HHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCC
T ss_pred HHHHHHcC--CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCc
Confidence 45566666 67788999999999999999999876 79999999 888888764 348999999997653459
Q ss_pred eEEEeccccccCCh-------HHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhh--------hccH-Hhh
Q 018565 249 DAAIIKWVLHDWGD-------DECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRL--------MLDM-VMM 312 (354)
Q Consensus 249 D~i~~~~~lh~~~~-------~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~--------~~~l-~~~ 312 (354)
|+|++..++|++++ +....++++++++||| ||++++.+...+.... . ..... +.+. ...
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~ 213 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPD-DGRMLLHTITIPDKEE-A---QELGLTSPMSLLRFIKFILTE 213 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCT-TCEEEEEEEECCCHHH-H---HHHTCCCCHHHHHHHHHHHHH
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCC-CcEEEEEEEeccCccc-h---hhccccccccccchHHHHHHh
Confidence 99999999999944 5678999999999999 9999998887654321 0 00000 0011 112
Q ss_pred cccCCcccCCHHHHHHHHHHcCCceeEEEEcCC
Q 018565 313 AHTNKGKERSLKEWDYVLRQAGFSRYNITSIHA 345 (354)
Q Consensus 313 ~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~ 345 (354)
.. .++..++.+++.++++++||+++++...+.
T Consensus 214 ~~-p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 214 IF-PGGRLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp TC-TTCCCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred cC-CCCCCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 23 566788999999999999999999877643
No 34
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.72 E-value=1.3e-16 Score=140.90 Aligned_cols=152 Identities=15% Similarity=0.131 Sum_probs=117.2
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC--
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP-- 246 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~-- 246 (354)
.++..+. ...+..+|||||||+|..+..+++.++. +++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 36 ~~l~~l~-~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 113 (257)
T 3f4k_A 36 KAVSFIN-ELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNE 113 (257)
T ss_dssp HHHTTSC-CCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTT
T ss_pred HHHHHHh-cCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCC
Confidence 3444443 1556789999999999999999999886 9999999 888887764 3569999999987 554
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHH
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEW 326 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~ 326 (354)
.||+|++..++|+++ ..++|++++++||| ||++++.+........ .. ......... ....++.++|
T Consensus 114 ~fD~v~~~~~l~~~~---~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~-~~------~~~~~~~~~---~~~~~~~~~~ 179 (257)
T 3f4k_A 114 ELDLIWSEGAIYNIG---FERGMNEWSKYLKK-GGFIAVSEASWFTSER-PA------EIEDFWMDA---YPEISVIPTC 179 (257)
T ss_dssp CEEEEEEESCSCCCC---HHHHHHHHHTTEEE-EEEEEEEEEEESSSCC-CH------HHHHHHHHH---CTTCCBHHHH
T ss_pred CEEEEEecChHhhcC---HHHHHHHHHHHcCC-CcEEEEEEeeccCCCC-hH------HHHHHHHHh---CCCCCCHHHH
Confidence 499999999999984 35899999999999 9999999976554333 21 111111111 1236689999
Q ss_pred HHHHHHcCCceeEEEEcCC
Q 018565 327 DYVLRQAGFSRYNITSIHA 345 (354)
Q Consensus 327 ~~ll~~aGf~~~~~~~~~~ 345 (354)
.++++++||+++++...+.
T Consensus 180 ~~~l~~aGf~~v~~~~~~~ 198 (257)
T 3f4k_A 180 IDKMERAGYTPTAHFILPE 198 (257)
T ss_dssp HHHHHHTTEEEEEEEECCG
T ss_pred HHHHHHCCCeEEEEEECCh
Confidence 9999999999999887764
No 35
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.72 E-value=2.4e-16 Score=146.82 Aligned_cols=214 Identities=11% Similarity=-0.013 Sum_probs=142.4
Q ss_pred ChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccc-hhhcCCCcchHHHHH-Hh
Q 018565 41 GIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSR-RLMRHGENNMAAFIL-LE 118 (354)
Q Consensus 41 glf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~-~l~~~~~~~~~~~~~-~~ 118 (354)
+||..| . +|.|++|||+.+|+++..+++||+.|.+.|+++..+ + |++|+.++ ++...++.+..+... ..
T Consensus 47 ~ll~~L-~--~~~t~~eLa~~~g~~~~~v~~~L~~l~~~gll~~~~-----~-~~lt~~~~~~l~~~~~~~~~~~~~~~~ 117 (373)
T 2qm3_A 47 NVLSAV-L--ASDDIWRIVDLSEEPLPLVVAILESLNELGYVTFED-----G-VKLTEKGEELVAEYGIGKRYDFTCPHC 117 (373)
T ss_dssp HHHHHH-H--HCSCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECSS-----S-SEECHHHHHHHHHHTCCCCCC------
T ss_pred HHHHHh-c--CCCCHHHHHHHhCCChHHHHHHHHHHhhCCcEEECC-----C-EEECHHHHHHHHhcCccccccccchhh
Confidence 789988 5 699999999999999999999999999999998754 5 99998765 555432211111110 00
Q ss_pred cC-----chhhhhhhhHHHhHhcCCCchhhhhcCCChhHHHhhChHHHHHHHHHhhhchhhhHHHHHhcCCCccCCCceE
Q 018565 119 SS-----PVMLAPWHSLGTRVLANGTSAFDKAHGKDVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETL 193 (354)
Q Consensus 119 ~~-----~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~v 193 (354)
.+ ..+...|..+.+.++.... + ...+.+.+ ..+... ....+ .... .. ..++.+|
T Consensus 118 ~g~g~~~~~~~~~~~~l~~~~~~~~~-~-~~~~~~~~-----~~~~~~--~~~~l---------~~~~-~~--~~~~~~V 176 (373)
T 2qm3_A 118 QGKTVDLQAFADLLEQFREIVKDRPE-P-LHEFDQAY-----VTPETT--VARVI---------LMHT-RG--DLENKDI 176 (373)
T ss_dssp ------CGGGHHHHHHHHHHHTTCCC-C-CGGGTCCC-----BCHHHH--HHHHH---------HHHH-TT--CSTTCEE
T ss_pred cCCCcchhhhHHHHHHHHHHHhcCCc-c-chhcCCee-----cCHHHH--HHHHH---------HHhh-cC--CCCCCEE
Confidence 00 1112235556666664421 1 11111100 011110 00000 0011 11 2246899
Q ss_pred EEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCCC-----cceEEEeccccccCC
Q 018565 194 VDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGVP-----EADAAIIKWVLHDWG 261 (354)
Q Consensus 194 LDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~~-----~~D~i~~~~~lh~~~ 261 (354)
||+| |+|.++..+++..|+.+++++|+ +.+++.+++ ..+++++.+|+.++.| .||+|++..+++..
T Consensus 177 LDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~- 254 (373)
T 2qm3_A 177 FVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLE- 254 (373)
T ss_dssp EEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHH-
T ss_pred EEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchH-
Confidence 9999 99999999999988889999999 899988875 2389999999988432 49999998876643
Q ss_pred hHHHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 262 DDECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 262 ~~~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
....+++++.++||| ||++++++..
T Consensus 255 --~~~~~l~~~~~~Lkp-gG~~~~~~~~ 279 (373)
T 2qm3_A 255 --AIRAFVGRGIATLKG-PRCAGYFGIT 279 (373)
T ss_dssp --HHHHHHHHHHHTBCS-TTCEEEEEEC
T ss_pred --HHHHHHHHHHHHccc-CCeEEEEEEe
Confidence 257899999999999 9987666654
No 36
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.72 E-value=4.4e-17 Score=147.82 Aligned_cols=166 Identities=13% Similarity=0.094 Sum_probs=119.5
Q ss_pred cCCCceEEEecCCccHHHHHHH-HHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC-cceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLT-KAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP-EADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~-~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~-~~D~i~~~~ 255 (354)
+.+..+|||||||+|.++..++ ..+|+.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 4567899999999999999986 6789999999999 888888765 3459999999988 544 599999999
Q ss_pred ccccCChH-HHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCc-chh--hhh---hh-cc--HHhhcccCCcccCCHHH
Q 018565 256 VLHDWGDD-ECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDN-KFK--SVR---LM-LD--MVMMAHTNKGKERSLKE 325 (354)
Q Consensus 256 ~lh~~~~~-~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~-~~~--~~~---~~-~~--l~~~~~~~~g~~~t~~e 325 (354)
++|++++. ...+++++++++||| ||.+++.+...+.... .. .+. ... .. .. +...........++.++
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKP-GGALVTSFLTPPPALS-PDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEE-EEEEEEECCCCCTTTC-TTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCC-CeEEEEEecCCCCccc-ccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 99998655 445799999999999 9999998866544322 10 000 000 00 00 00010101114479999
Q ss_pred HHHHHHHcCCceeEEEEcCC-ceeEEEEeC
Q 018565 326 WDYVLRQAGFSRYNITSIHA-VQSLIEAFP 354 (354)
Q Consensus 326 ~~~ll~~aGf~~~~~~~~~~-~~~~i~~~~ 354 (354)
+.++|+++||+++++..... ....+.++|
T Consensus 274 ~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp HHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred HHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 99999999999999987643 444555554
No 37
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.72 E-value=3.4e-17 Score=142.83 Aligned_cols=163 Identities=17% Similarity=0.160 Sum_probs=117.7
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCC-cceEEEe-ccccccCCh
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVP-EADAAII-KWVLHDWGD 262 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~-~~D~i~~-~~~lh~~~~ 262 (354)
.+..+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++ ..++|++++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCC
Confidence 3568999999999999999999876 8999999 889888876 5679999999988 544 4999995 558988854
Q ss_pred -HHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhh--------------------hhhhccHHhhcccCCc---
Q 018565 263 -DECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKS--------------------VRLMLDMVMMAHTNKG--- 318 (354)
Q Consensus 263 -~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~--------------------~~~~~~l~~~~~~~~g--- 318 (354)
++..++|++++++|+| ||.+++.+...++... ...... ......+.+.....++
T Consensus 117 ~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEP-GGVVVVEPWWFPETFA-DGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVR 194 (239)
T ss_dssp HHHHHHHHHHHHHTEEE-EEEEEECCCCCTTTCC-TTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEE
T ss_pred HHHHHHHHHHHHHhcCC-CeEEEEEeccCccccc-ccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcce
Confidence 6778999999999999 9999987665544321 100000 0000111111110111
Q ss_pred --------ccCCHHHHHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 319 --------KERSLKEWDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 319 --------~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
+.+|.++|.++|+++||++..+........++.++|
T Consensus 195 ~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 195 HFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred EEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 456999999999999998777766566677777765
No 38
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=4e-17 Score=138.97 Aligned_cols=138 Identities=15% Similarity=0.098 Sum_probs=113.5
Q ss_pred CceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCC--cceEEEeccccccCChHH
Q 018565 190 IETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVP--EADAAIIKWVLHDWGDDE 264 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~~~~~ 264 (354)
..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|+++.++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 689999999999999999987 568999999 888888876 6789999999988 543 499999999999998777
Q ss_pred HHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEEEEcC
Q 018565 265 CIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 265 ~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 344 (354)
...+|++++++||| ||.+++.+...+.... + .. .. .....++.++|.++|+++||+++++...+
T Consensus 120 ~~~~l~~~~~~L~p-gG~l~i~~~~~~~~~~----~---~~-------~~-~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 120 LPDALVALRMAVED-GGGLLMSFFSGPSLEP----M---YH-------PV-ATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp HHHHHHHHHHTEEE-EEEEEEEEECCSSCEE----E---CC-------SS-SCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHcCC-CcEEEEEEccCCchhh----h---hc-------hh-hhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 88999999999999 9999998765433111 0 00 01 23356789999999999999999998875
Q ss_pred C
Q 018565 345 A 345 (354)
Q Consensus 345 ~ 345 (354)
.
T Consensus 184 ~ 184 (203)
T 3h2b_A 184 R 184 (203)
T ss_dssp T
T ss_pred C
Confidence 4
No 39
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.71 E-value=1.1e-16 Score=139.94 Aligned_cols=141 Identities=17% Similarity=0.318 Sum_probs=110.6
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCC---CCC--cceEEEeccccccC
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFD---GVP--EADAAIIKWVLHDW 260 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~---~~~--~~D~i~~~~~lh~~ 260 (354)
+.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. ++++.+|+.+ +++ .||+|++..++|++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~ 114 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHL 114 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGS
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhC
Confidence 456789999999999999999987 568999999 8888888744 8999998876 444 49999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEE
Q 018565 261 GDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNI 340 (354)
Q Consensus 261 ~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 340 (354)
++++...+|++++++||| ||.+++...... . . ...... .........++.+++.++++++||+++++
T Consensus 115 ~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~---~----~---~~~~~~--~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 115 DPERLFELLSLCYSKMKY-SSYIVIESPNPT---S----L---YSLINF--YIDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp CGGGHHHHHHHHHHHBCT-TCCEEEEEECTT---S----H---HHHHHH--TTSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred CcHHHHHHHHHHHHHcCC-CcEEEEEeCCcc---h----h---HHHHHH--hcCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 988888999999999999 999998765321 1 0 001111 11113345678999999999999999988
Q ss_pred EEcC
Q 018565 341 TSIH 344 (354)
Q Consensus 341 ~~~~ 344 (354)
....
T Consensus 182 ~~~~ 185 (240)
T 3dli_A 182 EFFE 185 (240)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7653
No 40
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.71 E-value=6.9e-17 Score=141.28 Aligned_cols=152 Identities=18% Similarity=0.305 Sum_probs=115.6
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CCC--c
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GVP--E 247 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~--~ 247 (354)
.+++.+. ..+..+|||||||+|.++..+++..+ +++++|+ +.+++.+++ ..++++..+|+.+ +++ .
T Consensus 12 ~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 87 (239)
T 1xxl_A 12 LMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDS 87 (239)
T ss_dssp HHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTC
T ss_pred hHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCc
Confidence 3344444 66789999999999999999998864 8999999 888887764 2689999999987 554 4
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccH-HhhcccCCcccCCHHHH
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDM-VMMAHTNKGKERSLKEW 326 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~g~~~t~~e~ 326 (354)
||+|++..++|++++. ..+|++++++||| ||.+++.+...+.... ...+... ...........++.++|
T Consensus 88 fD~v~~~~~l~~~~~~--~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (239)
T 1xxl_A 88 FDIITCRYAAHHFSDV--RKAVREVARVLKQ-DGRFLLVDHYAPEDPV-------LDEFVNHLNRLRDPSHVRESSLSEW 157 (239)
T ss_dssp EEEEEEESCGGGCSCH--HHHHHHHHHHEEE-EEEEEEEEECBCSSHH-------HHHHHHHHHHHHCTTCCCCCBHHHH
T ss_pred EEEEEECCchhhccCH--HHHHHHHHHHcCC-CcEEEEEEcCCCCChh-------HHHHHHHHHHhccccccCCCCHHHH
Confidence 9999999999999864 5899999999999 9999999877654321 1111111 11111123456789999
Q ss_pred HHHHHHcCCceeEEEEc
Q 018565 327 DYVLRQAGFSRYNITSI 343 (354)
Q Consensus 327 ~~ll~~aGf~~~~~~~~ 343 (354)
.++|+++||+.+++...
T Consensus 158 ~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 158 QAMFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHCCCcEEEEEee
Confidence 99999999998887654
No 41
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.71 E-value=8.2e-17 Score=140.33 Aligned_cols=133 Identities=14% Similarity=0.151 Sum_probs=109.2
Q ss_pred CceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC-cceEEEecccccc
Q 018565 190 IETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP-EADAAIIKWVLHD 259 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~-~~D~i~~~~~lh~ 259 (354)
..+|||||||+|.++..+++ ++.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 35999999999999999876 5778999999 888887765 2469999999998 333 4999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeE
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYN 339 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 339 (354)
++++...+++++++++||| ||.+++.+........ . ....++.++|.++|+++||++++
T Consensus 145 ~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKP-DGELITLMYPITDHVG-G-------------------PPYKVDVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEE-EEEEEEEECCCSCCCS-C-------------------SSCCCCHHHHHHHHGGGTEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCC-CcEEEEEEecccccCC-C-------------------CCccCCHHHHHHHHHHcCCeEEE
Confidence 9988888999999999999 9999997765443222 1 11225799999999999999999
Q ss_pred EEEcCC
Q 018565 340 ITSIHA 345 (354)
Q Consensus 340 ~~~~~~ 345 (354)
+...+.
T Consensus 204 ~~~~~~ 209 (235)
T 3lcc_A 204 VEENPH 209 (235)
T ss_dssp EEECTT
T ss_pred EEecCC
Confidence 887643
No 42
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.71 E-value=1.4e-16 Score=142.13 Aligned_cols=140 Identities=15% Similarity=0.195 Sum_probs=110.5
Q ss_pred CCceEEEecCCc---cHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCCC--------------CC
Q 018565 189 GIETLVDIGGND---GTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFDG--------------VP 246 (354)
Q Consensus 189 ~~~~vLDvG~G~---G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~~--------------~~ 246 (354)
+..+|||||||+ |.++..+.+.+|+.+++++|+ |.+++.+++ .++++++.+|+.++ +.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 998888888899999999999 999998875 47899999999762 23
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHH
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEW 326 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~ 326 (354)
.||+|++..++|++++++...+|++++++||| ||+|++.+...+. . .. . ....+...... .....++.+++
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~p-GG~l~i~~~~~~~--~-~~-~---~~~~~~~~~~~-~~~~~~s~~ei 227 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAP-GSYLFMTSLVDTG--L-PA-Q---QKLARITRENL-GEGWARTPEEI 227 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCT-TCEEEEEEEBCSS--C-HH-H---HHHHHHHHHHH-SCCCCBCHHHH
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCC-CcEEEEEEecCcc--h-HH-H---HHHHHHHHhcC-CCCccCCHHHH
Confidence 58999999999999987888999999999999 9999999876532 2 10 1 11122221111 24567899999
Q ss_pred HHHHHHcCCceeE
Q 018565 327 DYVLRQAGFSRYN 339 (354)
Q Consensus 327 ~~ll~~aGf~~~~ 339 (354)
.++| .||++++
T Consensus 228 ~~~l--~G~~l~~ 238 (274)
T 2qe6_A 228 ERQF--GDFELVE 238 (274)
T ss_dssp HHTT--TTCEECT
T ss_pred HHHh--CCCeEcc
Confidence 9999 5998776
No 43
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.71 E-value=6.7e-17 Score=144.30 Aligned_cols=153 Identities=16% Similarity=0.221 Sum_probs=115.2
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CCC--cceEEEeccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GVP--EADAAIIKWV 256 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~--~~D~i~~~~~ 256 (354)
+.+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .+++++..+|+.+ +++ .||+|++.++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 56788999999999999999999999999999999 888887764 3579999999988 544 4999999999
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhcc-HHhhcccCCcccCCHHHHHHHHHHcCC
Q 018565 257 LHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLD-MVMMAHTNKGKERSLKEWDYVLRQAGF 335 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~g~~~t~~e~~~ll~~aGf 335 (354)
+|++++.. .+|++++++||| ||.+++.+........ .+........+. +.......++..++..++.++|+++||
T Consensus 115 l~~~~~~~--~~l~~~~~~L~p-gG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 190 (276)
T 3mgg_A 115 LEHLQSPE--EALKSLKKVLKP-GGTITVIEGDHGSCYF-HPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGF 190 (276)
T ss_dssp GGGCSCHH--HHHHHHHHHEEE-EEEEEEEEECGGGCEE-ESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTC
T ss_pred hhhcCCHH--HHHHHHHHHcCC-CcEEEEEEcCCCCceE-CCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCC
Confidence 99998764 899999999999 9999998864422111 000000111111 111111144566778899999999999
Q ss_pred ceeEEEEc
Q 018565 336 SRYNITSI 343 (354)
Q Consensus 336 ~~~~~~~~ 343 (354)
+++++.+.
T Consensus 191 ~~v~~~~~ 198 (276)
T 3mgg_A 191 EKIRVEPR 198 (276)
T ss_dssp EEEEEEEE
T ss_pred CeEEEeeE
Confidence 99988754
No 44
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.71 E-value=1.5e-16 Score=145.08 Aligned_cols=161 Identities=17% Similarity=0.173 Sum_probs=122.0
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCCCcc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGVPEA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~~~~ 248 (354)
..+++.++ ..+..+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ .+++++..+|+.+....|
T Consensus 80 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 156 (318)
T 2fk8_A 80 DLNLDKLD--LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPV 156 (318)
T ss_dssp HHHHTTSC--CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCC
T ss_pred HHHHHhcC--CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCc
Confidence 45566666 6678899999999999999999886 569999999 888887764 257999999987732569
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCc----chh-hhhhhccH-HhhcccCCcccCC
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDN----KFK-SVRLMLDM-VMMAHTNKGKERS 322 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~----~~~-~~~~~~~l-~~~~~~~~g~~~t 322 (354)
|+|++..++|++++++...+|++++++||| ||++++.+...+.... .. +.. ......+. ..... .++..++
T Consensus 157 D~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s 233 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHENYDDFFKRCFNIMPA-DGRMTVQSSVSYHPYE-MAARGKKLSFETARFIKFIVTEIF-PGGRLPS 233 (318)
T ss_dssp SEEEEESCGGGTCGGGHHHHHHHHHHHSCT-TCEEEEEEEECCCHHH-HHTTCHHHHHHHHHHHHHHHHHTS-TTCCCCC
T ss_pred CEEEEeChHHhcCHHHHHHHHHHHHHhcCC-CcEEEEEEeccCCchh-hhhccccccccccchhhHHHHhcC-CCCcCCC
Confidence 999999999999877788999999999999 9999998887654211 00 000 00000111 11122 4567789
Q ss_pred HHHHHHHHHHcCCceeEEEEc
Q 018565 323 LKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 323 ~~e~~~ll~~aGf~~~~~~~~ 343 (354)
.+++.++++++||+++++..+
T Consensus 234 ~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 234 TEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp HHHHHHHHHHTTCBCCCCEEC
T ss_pred HHHHHHHHHhCCCEEEEEEec
Confidence 999999999999999987765
No 45
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.71 E-value=1.5e-16 Score=141.38 Aligned_cols=151 Identities=15% Similarity=0.112 Sum_probs=117.6
Q ss_pred HHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC--c
Q 018565 179 IIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP--E 247 (354)
Q Consensus 179 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~--~ 247 (354)
++..+. .+.++.+|||||||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+.+ +++ .
T Consensus 37 ~l~~l~-~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 114 (267)
T 3kkz_A 37 ALSFID-NLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEE 114 (267)
T ss_dssp HHTTCC-CCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHhcc-cCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCC
Confidence 344443 2567789999999999999999998 7889999999 888887765 3679999999988 544 4
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHH
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWD 327 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~ 327 (354)
||+|++..++|+++ ...++++++++||| ||.+++.+........ .. ........ .....++.+++.
T Consensus 115 fD~i~~~~~~~~~~---~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-~~------~~~~~~~~---~~~~~~~~~~~~ 180 (267)
T 3kkz_A 115 LDLIWSEGAIYNIG---FERGLNEWRKYLKK-GGYLAVSECSWFTDER-PA------EINDFWMD---AYPEIDTIPNQV 180 (267)
T ss_dssp EEEEEESSCGGGTC---HHHHHHHHGGGEEE-EEEEEEEEEEESSSCC-CH------HHHHHHHH---HCTTCEEHHHHH
T ss_pred EEEEEEcCCceecC---HHHHHHHHHHHcCC-CCEEEEEEeeecCCCC-hH------HHHHHHHH---hCCCCCCHHHHH
Confidence 99999999999983 35889999999999 9999999987654433 21 11111111 122456899999
Q ss_pred HHHHHcCCceeEEEEcCC
Q 018565 328 YVLRQAGFSRYNITSIHA 345 (354)
Q Consensus 328 ~ll~~aGf~~~~~~~~~~ 345 (354)
++++++||+++++..++.
T Consensus 181 ~~l~~aGf~~v~~~~~~~ 198 (267)
T 3kkz_A 181 AKIHKAGYLPVATFILPE 198 (267)
T ss_dssp HHHHHTTEEEEEEEECCG
T ss_pred HHHHHCCCEEEEEEECCH
Confidence 999999999999988763
No 46
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.70 E-value=6.7e-17 Score=137.80 Aligned_cols=134 Identities=8% Similarity=-0.013 Sum_probs=106.2
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------------------CCCeEEeecCCCC-CC-
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------------------CHGVEHVGGDMFD-GV- 245 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------------~~~v~~~~~d~~~-~~- 245 (354)
..+..+|||+|||+|..+..++++ +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 456789999999999999999997 569999999 889888764 2579999999998 54
Q ss_pred --CcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCH
Q 018565 246 --PEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSL 323 (354)
Q Consensus 246 --~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~ 323 (354)
..||+|++..++|+++++...+++++++++||| ||+++++....+.... . ......+.
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp-gG~~~l~~~~~~~~~~-~------------------~~~~~~~~ 157 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQ-ACSGLLITLEYDQALL-E------------------GPPFSVPQ 157 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS-EEEEEEEEESSCSSSS-S------------------SCCCCCCH
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCC-CcEEEEEEEecCcccc-C------------------CCCCCCCH
Confidence 359999999999999988888899999999999 9996665443321111 0 11122578
Q ss_pred HHHHHHHHHcCCceeEEEEc
Q 018565 324 KEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 324 ~e~~~ll~~aGf~~~~~~~~ 343 (354)
+++.+++++ ||++..+...
T Consensus 158 ~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 158 TWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp HHHHHTSCS-SEEEEEEEES
T ss_pred HHHHHHhcC-CcEEEEeccc
Confidence 999999998 9998877665
No 47
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.70 E-value=2.1e-16 Score=147.88 Aligned_cols=144 Identities=19% Similarity=0.280 Sum_probs=114.2
Q ss_pred CCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhcccC--------------CCeEEeecCCCC-------C
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEKC--------------HGVEHVGGDMFD-------G 244 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~--------------~~v~~~~~d~~~-------~ 244 (354)
.++.+|||||||+|.++..+++.+ |+.+++++|+ +.+++.+++. .+++++.+|+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 467899999999999999999986 7889999999 8888887652 689999999987 4
Q ss_pred CC--cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCC
Q 018565 245 VP--EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERS 322 (354)
Q Consensus 245 ~~--~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t 322 (354)
++ .||+|++..++|++++. ..+|++++++||| ||++++.+........ . ........+.. ..+..++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lkp-gG~l~i~~~~~~~~~~-~------~~~~~~~~~~~-~~~~~~~ 230 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNK--LALFKEIHRVLRD-GGELYFSDVYADRRLS-E------AAQQDPILYGE-CLGGALY 230 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEE-EEEEEEEEEEESSCCC-H------HHHHCHHHHHT-TCTTCCB
T ss_pred CCCCCEEEEEEccchhcCCCH--HHHHHHHHHHcCC-CCEEEEEEeccccccC-H------hHhhhHHHhhc-ccccCCC
Confidence 44 49999999999998764 5899999999999 9999999887654333 1 11112222222 3446678
Q ss_pred HHHHHHHHHHcCCceeEEEE
Q 018565 323 LKEWDYVLRQAGFSRYNITS 342 (354)
Q Consensus 323 ~~e~~~ll~~aGf~~~~~~~ 342 (354)
.++|.++|+++||+.+++..
T Consensus 231 ~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 231 LEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEe
Confidence 99999999999999887654
No 48
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.70 E-value=5e-17 Score=134.33 Aligned_cols=141 Identities=13% Similarity=0.082 Sum_probs=113.3
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCCcceEEEeccccccCChH
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVPEADAAIIKWVLHDWGDD 263 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~~~D~i~~~~~lh~~~~~ 263 (354)
..+..+|||+|||+|.++..+++... +++++|+ +.+++.+++ .+++++..+| .. +...||+|++..++|++++.
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d-~~~~~~~~D~v~~~~~l~~~~~~ 91 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP-KEIPDNSVDFILFANSFHDMDDK 91 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG-GGSCTTCEEEEEEESCSTTCSCH
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC-CCCCCCceEEEEEccchhcccCH
Confidence 45678999999999999999999863 8999999 888888876 6789999999 32 33359999999999998754
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 264 ECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 264 ~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
..++++++++||| ||++++.+........ .+ .....++.++|.++++ ||+++++...
T Consensus 92 --~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 92 --QHVISEVKRILKD-DGRVIIIDWRKENTGI-GP-----------------PLSIRMDEKDYMGWFS--NFVVEKRFNP 148 (170)
T ss_dssp --HHHHHHHHHHEEE-EEEEEEEEECSSCCSS-SS-----------------CGGGCCCHHHHHHHTT--TEEEEEEECS
T ss_pred --HHHHHHHHHhcCC-CCEEEEEEcCcccccc-Cc-----------------hHhhhcCHHHHHHHHh--CcEEEEccCC
Confidence 5899999999999 9999999876554332 11 1113468999999999 9999999998
Q ss_pred CCceeEEEEe
Q 018565 344 HAVQSLIEAF 353 (354)
Q Consensus 344 ~~~~~~i~~~ 353 (354)
+.....+.+.
T Consensus 149 ~~~~~~l~~~ 158 (170)
T 3i9f_A 149 TPYHFGLVLK 158 (170)
T ss_dssp STTEEEEEEE
T ss_pred CCceEEEEEe
Confidence 7766555543
No 49
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.70 E-value=1.9e-16 Score=139.52 Aligned_cols=159 Identities=14% Similarity=0.125 Sum_probs=112.2
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---CCCeEEeecCCCC-CCC--cce
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---CHGVEHVGGDMFD-GVP--EAD 249 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~v~~~~~d~~~-~~~--~~D 249 (354)
..+.+.++ ..+..+|||||||+|.++..+++..+. +++++|+ +.+++.+++ ..++++..+|+.+ +++ .||
T Consensus 34 ~~l~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 110 (253)
T 3g5l_A 34 HELKKMLP--DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYN 110 (253)
T ss_dssp HHHHTTCC--CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEE
T ss_pred HHHHHhhh--ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeE
Confidence 34455555 456789999999999999999998654 8999999 888888775 4789999999987 554 499
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeC------------CCCCCCcchhhhhhhccH-----Hhh
Q 018565 250 AAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIE------------EDDGVDNKFKSVRLMLDM-----VMM 312 (354)
Q Consensus 250 ~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~------------~~~~~~~~~~~~~~~~~l-----~~~ 312 (354)
+|++..++|++++ ..++|++++++||| ||.+++...... .... ...+. ....++- ...
T Consensus 111 ~v~~~~~l~~~~~--~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 185 (253)
T 3g5l_A 111 VVLSSLALHYIAS--FDDICKKVYINLKS-SGSFIFSVEHPVFTADGRQDWYTDETGN-KLHWP-VDRYFNESMRTSHFL 185 (253)
T ss_dssp EEEEESCGGGCSC--HHHHHHHHHHHEEE-EEEEEEEEECHHHHSSSSCSCEECSSCC-EEEEE-ECCTTCCCEEEEEET
T ss_pred EEEEchhhhhhhh--HHHHHHHHHHHcCC-CcEEEEEeCCCccccCccccceeccCCc-eEEEE-eccccccceEEEeec
Confidence 9999999999865 46899999999999 999998743211 0000 00000 0000000 000
Q ss_pred cccCCcccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 313 AHTNKGKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 313 ~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
........+|.++|.++|+++||+++++...
T Consensus 186 ~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 186 GEDVQKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp TEEEEEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred cccCccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 0001112349999999999999999998754
No 50
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.69 E-value=3.2e-16 Score=137.00 Aligned_cols=142 Identities=12% Similarity=0.154 Sum_probs=110.2
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---CCCeEEeecCCCC-CCC--cceEEEeccccccC
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---CHGVEHVGGDMFD-GVP--EADAAIIKWVLHDW 260 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~ 260 (354)
.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++.+++|++
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 36789999999999999999987 668999999 888888875 4789999999988 554 49999999999998
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEE
Q 018565 261 GDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNI 340 (354)
Q Consensus 261 ~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 340 (354)
++. ..+|++++++|+| ||.+++.+........ ....... .... .....++.+++.++++++||++++.
T Consensus 130 ~~~--~~~l~~~~~~L~p-gG~l~i~~~~~~~~~~-------~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 130 EEP--LRALNEIKRVLKS-DGYACIAILGPTAKPR-------ENSYPRL-YGKD-VVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp SCH--HHHHHHHHHHEEE-EEEEEEEEECTTCGGG-------GGGGGGG-GTCC-CSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred cCH--HHHHHHHHHHhCC-CeEEEEEEcCCcchhh-------hhhhhhh-cccc-ccccCCCHHHHHHHHHHcCCEEEEe
Confidence 765 4889999999999 9999998754322111 1111111 1111 2335578999999999999999998
Q ss_pred EEc
Q 018565 341 TSI 343 (354)
Q Consensus 341 ~~~ 343 (354)
..+
T Consensus 198 ~~~ 200 (242)
T 3l8d_A 198 IGV 200 (242)
T ss_dssp EEE
T ss_pred ecc
Confidence 754
No 51
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.69 E-value=1.7e-16 Score=143.51 Aligned_cols=161 Identities=14% Similarity=0.197 Sum_probs=114.2
Q ss_pred CceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----C----CCeEEeecCCCC-CCC-cceEEEe-ccc
Q 018565 190 IETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----C----HGVEHVGGDMFD-GVP-EADAAII-KWV 256 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~----~~v~~~~~d~~~-~~~-~~D~i~~-~~~ 256 (354)
..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ . .+++++.+|+.+ +.+ .||+|++ ..+
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGS 160 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHH
T ss_pred CCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCcc
Confidence 349999999999999999987 578999999 889888875 1 689999999998 554 4998886 577
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCC--CCc--chhh-hhh-------------hccHHhhc-----
Q 018565 257 LHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDG--VDN--KFKS-VRL-------------MLDMVMMA----- 313 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~--~~~--~~~~-~~~-------------~~~l~~~~----- 313 (354)
+|++++++..++|++++++||| ||.|++.....+.... ... .+.. ... ...+....
T Consensus 161 ~~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T 3g2m_A 161 INELDEADRRGLYASVREHLEP-GGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADETT 239 (299)
T ss_dssp HTTSCHHHHHHHHHHHHHHEEE-EEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC--
T ss_pred cccCCHHHHHHHHHHHHHHcCC-CcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCCC
Confidence 8888887889999999999999 9999987755432100 000 0000 000 00000000
Q ss_pred -----ccCCcccCCHHHHHHHHHHcCCceeEEEEcCC------ceeEEEEe
Q 018565 314 -----HTNKGKERSLKEWDYVLRQAGFSRYNITSIHA------VQSLIEAF 353 (354)
Q Consensus 314 -----~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~------~~~~i~~~ 353 (354)
.....+.++.++|.++|+++||+++++.+++. ...++++.
T Consensus 240 ~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~ 290 (299)
T 3g2m_A 240 DPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAV 290 (299)
T ss_dssp CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEE
T ss_pred CcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehh
Confidence 00112356999999999999999999988853 24566664
No 52
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.69 E-value=1.3e-16 Score=139.64 Aligned_cols=139 Identities=19% Similarity=0.258 Sum_probs=112.9
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CCC--cceEEEeccccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GVP--EADAAIIKWVLH 258 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh 258 (354)
+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++..++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 57899999999999999998876 568999999 888888765 2358999999877 443 499999999999
Q ss_pred cCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCcee
Q 018565 259 DWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRY 338 (354)
Q Consensus 259 ~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 338 (354)
+++++....+|++++++|+| ||.+++.+...+. . . .++. . .....++.++|.++++++||+++
T Consensus 158 ~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~--~-~--------~~~~----~-~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRP-NGIIVIKDNMAQE--G-V--------ILDD----V-DSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEE-EEEEEEEEEEBSS--S-E--------EEET----T-TTEEEEBHHHHHHHHHHTTCCEE
T ss_pred hCCHHHHHHHHHHHHHhcCC-CeEEEEEEccCCC--c-c--------eecc----c-CCcccCCHHHHHHHHHHcCCeEE
Confidence 99998888999999999999 9999999877654 1 1 0000 0 22345689999999999999999
Q ss_pred EEEEcCC
Q 018565 339 NITSIHA 345 (354)
Q Consensus 339 ~~~~~~~ 345 (354)
++.....
T Consensus 221 ~~~~~~~ 227 (241)
T 2ex4_A 221 AEERQEN 227 (241)
T ss_dssp EEEECCS
T ss_pred EeeecCC
Confidence 9877643
No 53
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.69 E-value=2.8e-16 Score=137.65 Aligned_cols=148 Identities=16% Similarity=0.186 Sum_probs=107.6
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--CCCeEEeecCCCCCCC--cceEEEeccccccCChH
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--CHGVEHVGGDMFDGVP--EADAAIIKWVLHDWGDD 263 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~~~~--~~D~i~~~~~lh~~~~~ 263 (354)
++.+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ..+++++.+|+.+..+ .||+|++.+++|++++.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 119 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDDP 119 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSSH
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcCH
Confidence 467899999999999999998865 7999999 888888875 2289999999987422 49999999999999865
Q ss_pred HHHHHHHHHH-HhcCCCCceEEEEeeeeCCCCCCCcc----hhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCcee
Q 018565 264 ECIKILKNCK-EAITKDKGKVIIVEAIIEEDDGVDNK----FKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRY 338 (354)
Q Consensus 264 ~~~~~L~~~~-~~L~p~gG~lli~e~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 338 (354)
.++|++++ ++||| ||++++.++....... ... .......+.-..... .....++.+++.++|+++||+++
T Consensus 120 --~~~l~~~~~~~Lkp-gG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~Gf~~~ 194 (250)
T 2p7i_A 120 --VALLKRINDDWLAE-GGRLFLVCPNANAVSR-QIAVKMGIISHNSAVTEAEFAH-GHRCTYALDTLERDASRAGLQVT 194 (250)
T ss_dssp --HHHHHHHHHTTEEE-EEEEEEEEECTTCHHH-HHHHHTTSSSSTTCCCHHHHHT-TCCCCCCHHHHHHHHHHTTCEEE
T ss_pred --HHHHHHHHHHhcCC-CCEEEEEcCChHHHHH-HHHHHcCccccchhcccccccc-cccccCCHHHHHHHHHHCCCeEE
Confidence 58999999 99999 9999998753321100 000 000000000000011 33456799999999999999999
Q ss_pred EEEEc
Q 018565 339 NITSI 343 (354)
Q Consensus 339 ~~~~~ 343 (354)
++...
T Consensus 195 ~~~~~ 199 (250)
T 2p7i_A 195 YRSGI 199 (250)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 88653
No 54
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.67 E-value=3.9e-16 Score=134.43 Aligned_cols=143 Identities=15% Similarity=0.105 Sum_probs=104.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccC-----------CCeEEeecCCCC-CC--CcceEEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKC-----------HGVEHVGGDMFD-GV--PEADAAI 252 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~-~~--~~~D~i~ 252 (354)
.+..+|||||||+|.++..+++..|..+++++|+ +.+++.+++. .++++..+|+.. +. ..||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4568999999999999999999988899999999 8888887651 289999999966 33 2599999
Q ss_pred eccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHH----H
Q 018565 253 IKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWD----Y 328 (354)
Q Consensus 253 ~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~----~ 328 (354)
+..++|++++++..+++++++++||| ||.+++... ...... . . .......... .....++.+++. +
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~~i~~~~-~~~~~~-~---~---~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 177 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRP-QTVIVSTPN-KEYNFH-Y---G---NLFEGNLRHR-DHRFEWTRKEFQTWAVK 177 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCC-SEEEEEEEB-GGGGGC-C---C---CT-----GGG-CCTTSBCHHHHHHHHHH
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCC-CEEEEEccc-hhhhhh-h---c---ccCccccccc-CceeeecHHHHHHHHHH
Confidence 99999999988888999999999999 985544332 211111 0 0 0000000111 223446888888 8
Q ss_pred HHHHcCCceeEE
Q 018565 329 VLRQAGFSRYNI 340 (354)
Q Consensus 329 ll~~aGf~~~~~ 340 (354)
+++++||++.-.
T Consensus 178 l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 178 VAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHTEEEEEE
T ss_pred HHHHCCcEEEEE
Confidence 899999976543
No 55
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.67 E-value=2e-15 Score=131.84 Aligned_cols=160 Identities=17% Similarity=0.153 Sum_probs=110.9
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---CCCeEEeecCCCC-CCC--cceE
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---CHGVEHVGGDMFD-GVP--EADA 250 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~v~~~~~d~~~-~~~--~~D~ 250 (354)
.+...++ ..+..+|||||||+|.++..+++... .+++++|+ +.+++.+++ ..++++..+|+.+ +.+ .||+
T Consensus 34 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 34 ALRAMLP--EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp HHHHHSC--CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHhcc--ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceE
Confidence 4445555 45678999999999999999988732 38999999 888888775 3479999999987 543 4999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchh---------hhhhhc-----cHHhhcccC
Q 018565 251 AIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFK---------SVRLML-----DMVMMAHTN 316 (354)
Q Consensus 251 i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~---------~~~~~~-----~l~~~~~~~ 316 (354)
|++..++|++++ ...+|++++++|+| ||.+++..............+. .....+ .........
T Consensus 111 v~~~~~l~~~~~--~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (243)
T 3bkw_A 111 AYSSLALHYVED--VARLFRTVHQALSP-GGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGV 187 (243)
T ss_dssp EEEESCGGGCSC--HHHHHHHHHHHEEE-EEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSC
T ss_pred EEEeccccccch--HHHHHHHHHHhcCc-CcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCce
Confidence 999999999875 45899999999999 9999997643210000000000 000000 000000001
Q ss_pred CcccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 317 KGKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 317 ~g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
....++.++|.++|+++||+++++...
T Consensus 188 ~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 188 VKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred EEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 223468999999999999999998764
No 56
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.67 E-value=7.2e-16 Score=133.90 Aligned_cols=149 Identities=16% Similarity=0.130 Sum_probs=110.5
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----------CCCeEEeecCCCC-CCC--cceEEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----------CHGVEHVGGDMFD-GVP--EADAAI 252 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~-~~~--~~D~i~ 252 (354)
.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++++..+|+.+ +++ .||+|+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 46789999999999999999987 679999999 888887764 1368999999988 543 499999
Q ss_pred eccccccCChH-HHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcc--------------cCC
Q 018565 253 IKWVLHDWGDD-ECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAH--------------TNK 317 (354)
Q Consensus 253 ~~~~lh~~~~~-~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~--------------~~~ 317 (354)
+..++|++++. ...++|++++++|+| ||.+++.+........ .........+..... ...
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKP-GAYLYLVEFGQNWHLK----LYRKRYLHDFPITKEEGSFLARDPETGETEFI 181 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEE-EEEEEEEEEBCCTTSH----HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCC-CeEEEEEECCcchhHH----HHHHHhhhhccchhhhcceEecccccCCccee
Confidence 99999999754 467899999999999 9999999876533221 100101111111100 001
Q ss_pred cccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 318 GKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 318 g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
...++.++|.++|+++||+++++...
T Consensus 182 ~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 182 AHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp EECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred eEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 24679999999999999999988653
No 57
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.67 E-value=2.6e-16 Score=134.72 Aligned_cols=138 Identities=16% Similarity=0.058 Sum_probs=109.8
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCC-CCC-cceEEEeccccccCChH
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFD-GVP-EADAAIIKWVLHDWGDD 263 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~-~~D~i~~~~~lh~~~~~ 263 (354)
+.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++..++++..+|+.+ +.. .||+|++..++|+++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHH
Confidence 346789999999999999999987 669999999 8888888764478888899887 432 49999999999999988
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcC-CceeEEEE
Q 018565 264 ECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAG-FSRYNITS 342 (354)
Q Consensus 264 ~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aG-f~~~~~~~ 342 (354)
+...+|++++++||| ||.+++.......... . .. . .....++.++|.++++++| |+++++..
T Consensus 119 ~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-~-----------~~---~-~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 119 ELADVLKLIWRALKP-GGLFYASYKSGEGEGR-D-----------KL---A-RYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHHHHHHEEE-EEEEEEEEECCSSCEE-C-----------TT---S-CEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHHHHhcCC-CcEEEEEEcCCCcccc-c-----------cc---c-hhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 889999999999999 9999987543222111 0 00 0 1124568999999999999 99998876
Q ss_pred c
Q 018565 343 I 343 (354)
Q Consensus 343 ~ 343 (354)
.
T Consensus 182 ~ 182 (211)
T 3e23_A 182 S 182 (211)
T ss_dssp E
T ss_pred c
Confidence 5
No 58
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=7.2e-16 Score=136.58 Aligned_cols=151 Identities=15% Similarity=0.110 Sum_probs=113.1
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCC-CCC--cceEEE
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFD-GVP--EADAAI 252 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~i~ 252 (354)
..+.+.++ ..+..+|||||||+|.++..+++ |+.+++++|+ +.+++.++...+++++.+|+.+ +++ .||+|+
T Consensus 24 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~ 99 (261)
T 3ege_A 24 NAIINLLN--LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVI 99 (261)
T ss_dssp HHHHHHHC--CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEE
T ss_pred HHHHHHhC--CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEE
Confidence 34444444 56778999999999999999997 6789999999 8999988876699999999988 654 499999
Q ss_pred eccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHH
Q 018565 253 IKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQ 332 (354)
Q Consensus 253 ~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~ 332 (354)
+.+++|++++. .++|++++++|| ||++++.+...+.... . +. ...+... ... .....++.+++. +|++
T Consensus 100 ~~~~l~~~~~~--~~~l~~~~~~Lk--gG~~~~~~~~~~~~~~-~--~~--~~~~~~~-~~~-~~~~~~~~~~~~-~l~~ 167 (261)
T 3ege_A 100 SILAIHHFSHL--EKSFQEMQRIIR--DGTIVLLTFDIRLAQR-I--WL--YDYFPFL-WED-ALRFLPLDEQIN-LLQE 167 (261)
T ss_dssp EESCGGGCSSH--HHHHHHHHHHBC--SSCEEEEEECGGGCCC-C--GG--GGTCHHH-HHH-HHTSCCHHHHHH-HHHH
T ss_pred EcchHhhccCH--HHHHHHHHHHhC--CcEEEEEEcCCchhHH-H--HH--HHHHHHH-hhh-hhhhCCCHHHHH-HHHH
Confidence 99999998654 589999999999 7999998875443322 1 10 0111100 000 122345678888 9999
Q ss_pred cCCceeEEEEc
Q 018565 333 AGFSRYNITSI 343 (354)
Q Consensus 333 aGf~~~~~~~~ 343 (354)
+||+.+++.+.
T Consensus 168 aGF~~v~~~~~ 178 (261)
T 3ege_A 168 NTKRRVEAIPF 178 (261)
T ss_dssp HHCSEEEEEEC
T ss_pred cCCCceeEEEe
Confidence 99999988765
No 59
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.66 E-value=7.5e-16 Score=138.23 Aligned_cols=153 Identities=16% Similarity=0.169 Sum_probs=111.5
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC-cceEEEecccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPR-IRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP-EADAAIIKWVL 257 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~-~~D~i~~~~~l 257 (354)
..+..+|||||||+|.++..+++.+|. .+++++|+ +.+++.+++ ..++++..+|+.+ +.+ +||+|++..++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l 99 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFL 99 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCG
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChh
Confidence 557789999999999999999999984 89999999 888887764 3489999999998 554 49999999999
Q ss_pred ccCChHHHHHHHHHHHHhcCCCCceEEEEeeee-----C---CCCCCCcchhhhhhhccHHh-hcccCCcccCCHHHHHH
Q 018565 258 HDWGDDECIKILKNCKEAITKDKGKVIIVEAII-----E---EDDGVDNKFKSVRLMLDMVM-MAHTNKGKERSLKEWDY 328 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~-----~---~~~~~~~~~~~~~~~~~l~~-~~~~~~g~~~t~~e~~~ 328 (354)
|++++. .+++++++++||| ||.+++.++.. . ++.. .++......+..+.. .....+....+..++.+
T Consensus 100 ~~~~~~--~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (284)
T 3gu3_A 100 LHMTTP--ETMLQKMIHSVKK-GGKIICFEPHWISNMASYLLDGEK-QSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPI 175 (284)
T ss_dssp GGCSSH--HHHHHHHHHTEEE-EEEEEEEECCHHHHHHSEEETTSC-HHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHH
T ss_pred hcCCCH--HHHHHHHHHHcCC-CCEEEEEecchhcccccceecCcc-hhhccchHHHHHHHHHHhhhhcccccHHHHHHH
Confidence 998866 4899999999999 99999988651 1 1111 000000111111111 00112334556778999
Q ss_pred HHHHcCCceeEEEEc
Q 018565 329 VLRQAGFSRYNITSI 343 (354)
Q Consensus 329 ll~~aGf~~~~~~~~ 343 (354)
+|+++||+.+++...
T Consensus 176 ~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 176 YLSELGVKNIECRVS 190 (284)
T ss_dssp HHHHTTCEEEEEEEC
T ss_pred HHHHcCCCeEEEEEc
Confidence 999999999877443
No 60
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.65 E-value=5.8e-16 Score=138.54 Aligned_cols=154 Identities=13% Similarity=0.112 Sum_probs=112.6
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCC-cceEEE
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVP-EADAAI 252 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~-~~D~i~ 252 (354)
..+++.+. ..+..+|||||||+|.++..+++ ++.+++++|+ +.+++.+++ ..++++..+|+.+ +++ .||+|+
T Consensus 47 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 122 (279)
T 3ccf_A 47 EDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVF 122 (279)
T ss_dssp CHHHHHHC--CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEE
T ss_pred HHHHHHhC--CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEE
Confidence 34444444 55678999999999999999998 7889999999 888888875 4789999999988 554 499999
Q ss_pred eccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHH-hhc-----ccCCcccCCHHHH
Q 018565 253 IKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMV-MMA-----HTNKGKERSLKEW 326 (354)
Q Consensus 253 ~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~-~~~-----~~~~g~~~t~~e~ 326 (354)
+..++|++++. ..+|++++++||| ||++++....... . .. . ........ ... .......++.++|
T Consensus 123 ~~~~l~~~~d~--~~~l~~~~~~Lkp-gG~l~~~~~~~~~--~-~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (279)
T 3ccf_A 123 SNAMLHWVKEP--EAAIASIHQALKS-GGRFVAEFGGKGN--I-KY-I--LEALYNALETLGIHNPQALNPWYFPSIGEY 193 (279)
T ss_dssp EESCGGGCSCH--HHHHHHHHHHEEE-EEEEEEEEECTTT--T-HH-H--HHHHHHHHHHHTCCCGGGGCCCCCCCHHHH
T ss_pred EcchhhhCcCH--HHHHHHHHHhcCC-CcEEEEEecCCcc--h-HH-H--HHHHHHHHHhcCCccccCcCceeCCCHHHH
Confidence 99999998765 4899999999999 9999987653221 1 00 0 00111110 000 0011245689999
Q ss_pred HHHHHHcCCceeEEEEc
Q 018565 327 DYVLRQAGFSRYNITSI 343 (354)
Q Consensus 327 ~~ll~~aGf~~~~~~~~ 343 (354)
.++|+++||+++++...
T Consensus 194 ~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 194 VNILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHHHTEEEEEEEEE
T ss_pred HHHHHHcCCEEEEEEEe
Confidence 99999999999887654
No 61
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.65 E-value=2.3e-15 Score=127.36 Aligned_cols=142 Identities=13% Similarity=0.057 Sum_probs=111.4
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CCC-cc
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GVP-EA 248 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~-~~ 248 (354)
.+.+.++ ..+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ..++++..+|+.+ +.+ .|
T Consensus 23 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 98 (199)
T 2xvm_A 23 EVLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQY 98 (199)
T ss_dssp HHHHHTT--TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCE
T ss_pred HHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCc
Confidence 3444444 445679999999999999999987 679999999 888887764 2479999999988 543 49
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHH
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDY 328 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ 328 (354)
|+|++..++|++++++..+++++++++|+| ||.+++++...+.... .+ . .....++.+++.+
T Consensus 99 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~-gG~l~~~~~~~~~~~~-~~---------------~-~~~~~~~~~~l~~ 160 (199)
T 2xvm_A 99 DFILSTVVLMFLEAKTIPGLIANMQRCTKP-GGYNLIVAAMDTADYP-CT---------------V-GFPFAFKEGELRR 160 (199)
T ss_dssp EEEEEESCGGGSCGGGHHHHHHHHHHTEEE-EEEEEEEEEBCCSSSC-CC---------------S-CCSCCBCTTHHHH
T ss_pred eEEEEcchhhhCCHHHHHHHHHHHHHhcCC-CeEEEEEEeeccCCcC-CC---------------C-CCCCccCHHHHHH
Confidence 999999999999988888999999999999 9999998876544322 10 0 1224567899999
Q ss_pred HHHHcCCceeEEEEc
Q 018565 329 VLRQAGFSRYNITSI 343 (354)
Q Consensus 329 ll~~aGf~~~~~~~~ 343 (354)
++++ |++++....
T Consensus 161 ~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 161 YYEG--WERVKYNED 173 (199)
T ss_dssp HTTT--SEEEEEECC
T ss_pred HhcC--CeEEEeccc
Confidence 9987 999887543
No 62
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=9.7e-16 Score=135.29 Aligned_cols=150 Identities=12% Similarity=0.073 Sum_probs=111.4
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCC-cceEEE
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVP-EADAAI 252 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~-~~D~i~ 252 (354)
..++..+. ..+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..++++..+|+.+ +.+ .||+|+
T Consensus 23 ~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 100 (259)
T 2p35_A 23 RDLLAQVP--LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLY 100 (259)
T ss_dssp HHHHTTCC--CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEE
T ss_pred HHHHHhcC--CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEE
Confidence 34555555 56778999999999999999999999999999999 889888876 5789999999988 422 499999
Q ss_pred eccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHh---hc--c----cCCcccCCH
Q 018565 253 IKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVM---MA--H----TNKGKERSL 323 (354)
Q Consensus 253 ~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~---~~--~----~~~g~~~t~ 323 (354)
+..++|++++ ...+|++++++|+| ||.+++.++..... . . ......+.. +. . ......++.
T Consensus 101 ~~~~l~~~~~--~~~~l~~~~~~L~p-gG~l~~~~~~~~~~---~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (259)
T 2p35_A 101 ANAVFQWVPD--HLAVLSQLMDQLES-GGVLAVQMPDNLQE---P--T--HIAMHETADGGPWKDAFSGGGLRRKPLPPP 170 (259)
T ss_dssp EESCGGGSTT--HHHHHHHHGGGEEE-EEEEEEEEECCTTS---H--H--HHHHHHHHHHSTTGGGC-------CCCCCH
T ss_pred EeCchhhCCC--HHHHHHHHHHhcCC-CeEEEEEeCCCCCc---H--H--HHHHHHHhcCcchHHHhccccccccCCCCH
Confidence 9999999875 45899999999999 99999987532111 0 0 000001100 00 0 012355789
Q ss_pred HHHHHHHHHcCCcee
Q 018565 324 KEWDYVLRQAGFSRY 338 (354)
Q Consensus 324 ~e~~~ll~~aGf~~~ 338 (354)
++|.++|+++||++.
T Consensus 171 ~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 171 SDYFNALSPKSSRVD 185 (259)
T ss_dssp HHHHHHHGGGEEEEE
T ss_pred HHHHHHHHhcCCceE
Confidence 999999999999743
No 63
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.64 E-value=1.2e-15 Score=133.44 Aligned_cols=152 Identities=11% Similarity=0.093 Sum_probs=106.5
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC-cceEEEecc-cccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP-EADAAIIKW-VLHD 259 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~-~~D~i~~~~-~lh~ 259 (354)
+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++++..+|+.+ +.+ .||+|++.. ++|+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccc
Confidence 5689999999999999999987 568999999 888888765 2389999999987 544 599999998 9999
Q ss_pred CC-hHHHHHHHHHHHHhcCCCCceEEEEeeeeCC---CCCCC--c--------chhh----hhhhccHHhhcc-------
Q 018565 260 WG-DDECIKILKNCKEAITKDKGKVIIVEAIIEE---DDGVD--N--------KFKS----VRLMLDMVMMAH------- 314 (354)
Q Consensus 260 ~~-~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~---~~~~~--~--------~~~~----~~~~~~l~~~~~------- 314 (354)
++ +++..++|++++++|+| ||.+++....... ..... . .+.. ......+.++..
T Consensus 115 ~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKE-GGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKR 193 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEE-EEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEE
T ss_pred cCCHHHHHHHHHHHHHhcCC-CcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcccc
Confidence 84 36778999999999999 9988874321100 00000 0 0000 000000000100
Q ss_pred ---cCCcccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 315 ---TNKGKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 315 ---~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
....+.++.++|.++|+++||+++++...
T Consensus 194 ~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 194 FDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred cEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 00124569999999999999999998754
No 64
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.64 E-value=4.4e-16 Score=133.96 Aligned_cols=142 Identities=13% Similarity=0.086 Sum_probs=103.7
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccC-----------CCeEEeecCCCC-CC--CcceEEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKC-----------HGVEHVGGDMFD-GV--PEADAAI 252 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----------~~v~~~~~d~~~-~~--~~~D~i~ 252 (354)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++. .++++..+|+.. +. ..||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 4568999999999999999999988889999999 8888887641 289999999866 33 3599999
Q ss_pred eccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHH----H
Q 018565 253 IKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWD----Y 328 (354)
Q Consensus 253 ~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~----~ 328 (354)
+..++|+++++...++|++++++||| ||.+++.... +.... + ........... .....++.+++. +
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lkp-gG~li~~~~~-~~~~~----~---~~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 177 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQP-KIVIVTTPNI-EYNVK----F---ANLPAGKLRHK-DHRFEWTRSQFQNWANK 177 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCC-SEEEEEEEBH-HHHHH----T---C------------CCSCBCHHHHHHHHHH
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCC-CEEEEEccCc-ccchh----h---ccccccccccc-ccccccCHHHHHHHHHH
Confidence 99999999988888999999999999 9966554431 10000 0 00000000001 223446888888 8
Q ss_pred HHHHcCCceeE
Q 018565 329 VLRQAGFSRYN 339 (354)
Q Consensus 329 ll~~aGf~~~~ 339 (354)
+++++||++..
T Consensus 178 ~~~~~Gf~v~~ 188 (217)
T 3jwh_A 178 ITERFAYNVQF 188 (217)
T ss_dssp HHHHSSEEEEE
T ss_pred HHHHcCceEEE
Confidence 99999998754
No 65
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.63 E-value=2.8e-16 Score=141.63 Aligned_cols=146 Identities=14% Similarity=0.209 Sum_probs=105.8
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccC-----------------------------------
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKC----------------------------------- 231 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------------------------------- 231 (354)
....+|||||||+|.++..+++.++..+++++|+ +.+++.|++.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 3578999999999999999999999999999999 8888877641
Q ss_pred -----------------------------CCeEEeecCCCCCC--------CcceEEEeccccccC----ChHHHHHHHH
Q 018565 232 -----------------------------HGVEHVGGDMFDGV--------PEADAAIIKWVLHDW----GDDECIKILK 270 (354)
Q Consensus 232 -----------------------------~~v~~~~~d~~~~~--------~~~D~i~~~~~lh~~----~~~~~~~~L~ 270 (354)
.+|+|..+|+.... +.||+|++..+++++ +++...++|+
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 58999999998622 359999999999654 6778899999
Q ss_pred HHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHH--cCCceeEEEEc
Q 018565 271 NCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQ--AGFSRYNITSI 343 (354)
Q Consensus 271 ~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~--aGf~~~~~~~~ 343 (354)
+++++|+| ||.|++.......... ........... .....+..+++.++|.+ +||+.+++...
T Consensus 205 ~~~~~Lkp-GG~lil~~~~~~~y~~-------~~~~~~~~~~~--~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 205 RIYRHLRP-GGILVLEPQPWSSYGK-------RKTLTETIYKN--YYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHEEE-EEEEEEECCCHHHHHT-------TTTSCHHHHHH--HHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHhCC-CcEEEEecCCchhhhh-------hhcccHHHHhh--hhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 99999999 9988874322111000 00000000000 11123347899999999 99998887655
No 66
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.63 E-value=1.1e-15 Score=137.15 Aligned_cols=148 Identities=17% Similarity=0.134 Sum_probs=109.6
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-C-CC--cceEEEeccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-G-VP--EADAAIIKWV 256 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~-~~--~~D~i~~~~~ 256 (354)
++.+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+ + ++ .||+|++..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 3579999999999999999987 679999999 888888775 2689999999988 3 33 4999999999
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhc-------ccCCcccCCHHHHHHH
Q 018565 257 LHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMA-------HTNKGKERSLKEWDYV 329 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~g~~~t~~e~~~l 329 (354)
+|++++. ..+|++++++||| ||.+++.+........ .. .....+...... .......++.+++.++
T Consensus 146 l~~~~~~--~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (285)
T 4htf_A 146 LEWVADP--RSVLQTLWSVLRP-GGVLSLMFYNAHGLLM-HN---MVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLW 218 (285)
T ss_dssp GGGCSCH--HHHHHHHHHTEEE-EEEEEEEEEBHHHHHH-HH---HHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHH
T ss_pred hhcccCH--HHHHHHHHHHcCC-CeEEEEEEeCCchHHH-HH---HHhcCHHHHhhhccccccccCCCCCCCCHHHHHHH
Confidence 9999865 5899999999999 9999998764322100 00 000000000000 0012355789999999
Q ss_pred HHHcCCceeEEEEcCC
Q 018565 330 LRQAGFSRYNITSIHA 345 (354)
Q Consensus 330 l~~aGf~~~~~~~~~~ 345 (354)
|+++||+++++..+..
T Consensus 219 l~~aGf~v~~~~~~~~ 234 (285)
T 4htf_A 219 LEEAGWQIMGKTGVRV 234 (285)
T ss_dssp HHHTTCEEEEEEEESS
T ss_pred HHHCCCceeeeeeEEE
Confidence 9999999999887654
No 67
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.63 E-value=1.4e-15 Score=131.29 Aligned_cols=146 Identities=17% Similarity=0.155 Sum_probs=106.3
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCCC-----C-Cc-ceEEEeccccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFDG-----V-PE-ADAAIIKWVLH 258 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~-----~-~~-~D~i~~~~~lh 258 (354)
..++.+|||||||+|.++..+++. +.+++++|+ +.+++.+++..++++..+|+.+. . .. ||+|++..++|
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL 127 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh
Confidence 345689999999999999999987 668999999 89999888777888888877551 1 23 99999999999
Q ss_pred cCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcc-----cCCcccCCHHHHHHHHHHc
Q 018565 259 DWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAH-----TNKGKERSLKEWDYVLRQA 333 (354)
Q Consensus 259 ~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~g~~~t~~e~~~ll~~a 333 (354)
.++ ...+|++++++||| ||.+++.+........ .. +. ..+........ ......++.++|.++|+++
T Consensus 128 -~~~--~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~-~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 199 (227)
T 3e8s_A 128 -HQD--IIELLSAMRTLLVP-GGALVIQTLHPWSVAD-GD-YQ--DGWREESFAGFAGDWQPMPWYFRTLASWLNALDMA 199 (227)
T ss_dssp -SSC--CHHHHHHHHHTEEE-EEEEEEEECCTTTTCT-TC-CS--CEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHT
T ss_pred -hhh--HHHHHHHHHHHhCC-CeEEEEEecCccccCc-cc-cc--cccchhhhhccccCcccceEEEecHHHHHHHHHHc
Confidence 444 35899999999999 9999998765433221 10 00 00000000000 0112456999999999999
Q ss_pred CCceeEEEE
Q 018565 334 GFSRYNITS 342 (354)
Q Consensus 334 Gf~~~~~~~ 342 (354)
||+++++..
T Consensus 200 Gf~~~~~~~ 208 (227)
T 3e8s_A 200 GLRLVSLQE 208 (227)
T ss_dssp TEEEEEEEC
T ss_pred CCeEEEEec
Confidence 999999876
No 68
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.62 E-value=3.7e-15 Score=132.85 Aligned_cols=159 Identities=13% Similarity=0.101 Sum_probs=113.6
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hH------Hhhhccc-------CCCeEEeecC-C
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PH------VVCVAEK-------CHGVEHVGGD-M 241 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~------~~~~a~~-------~~~v~~~~~d-~ 241 (354)
.+++.++ ..++.+|||||||+|.++..+++++ |+.+++++|+ +. +++.+++ .+++++..+| +
T Consensus 34 ~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 111 (275)
T 3bkx_A 34 AIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNL 111 (275)
T ss_dssp HHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCT
T ss_pred HHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChh
Confidence 3444444 5677899999999999999999985 7789999999 54 6776654 2689999998 5
Q ss_pred CC---CCC--cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhh-hhccHHh--hc
Q 018565 242 FD---GVP--EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVR-LMLDMVM--MA 313 (354)
Q Consensus 242 ~~---~~~--~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~-~~~~l~~--~~ 313 (354)
.. +++ .||+|++..++|++++.. .+++.++++++| ||++++.+...+.... .. ..... ....... ..
T Consensus 112 ~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~-gG~l~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 186 (275)
T 3bkx_A 112 SDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAV-CDHVDVAEWSMQPTAL-DQ-IGHLQAAMIQGLLYAIA 186 (275)
T ss_dssp TTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTT-CSEEEEEEECSSCSSG-GG-HHHHHHHHHHHHHHHHS
T ss_pred hhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCC-CCEEEEEEecCCCCch-hh-hhHHHHHHHHHHHhhcc
Confidence 43 333 499999999999998775 478888888888 9999999987765432 11 10000 0000000 00
Q ss_pred ---ccCCcccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 314 ---HTNKGKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 314 ---~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
.......++.+++.++++++||+++++..+
T Consensus 187 ~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 187 PSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 001124679999999999999999988766
No 69
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.62 E-value=4.4e-15 Score=129.69 Aligned_cols=94 Identities=21% Similarity=0.277 Sum_probs=80.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC-cceEEEecc-cccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP-EADAAIIKW-VLHD 259 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~-~~D~i~~~~-~lh~ 259 (354)
+..+|||||||+|.++..+++. .+++++|+ +.+++.+++ ..++++..+|+.+ +.+ .||+|++.. ++|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNY 109 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGG
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhh
Confidence 4589999999999999998876 68999999 888888765 3679999999987 444 499999986 8988
Q ss_pred C-ChHHHHHHHHHHHHhcCCCCceEEEE
Q 018565 260 W-GDDECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 260 ~-~~~~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
+ +.+...++|++++++|+| ||.+++.
T Consensus 110 ~~~~~~~~~~l~~~~~~L~p-gG~l~~~ 136 (243)
T 3d2l_A 110 LQTEADVKQTFDSAARLLTD-GGKLLFD 136 (243)
T ss_dssp CCSHHHHHHHHHHHHHHEEE-EEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCC-CeEEEEE
Confidence 7 556778999999999999 9988873
No 70
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.62 E-value=3.5e-15 Score=131.28 Aligned_cols=133 Identities=5% Similarity=-0.084 Sum_probs=105.8
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----------------------CCCeEEeecCCCC
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----------------------CHGVEHVGGDMFD 243 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------------------~~~v~~~~~d~~~ 243 (354)
.+..+|||+|||+|..+..|++. +.+++++|+ +.+++.+++ ..++++..+|+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35689999999999999999987 669999999 888887743 1579999999998
Q ss_pred -CC---CcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcc
Q 018565 244 -GV---PEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGK 319 (354)
Q Consensus 244 -~~---~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ 319 (354)
+. ..||+|++..++|+++++...+++++++++||| ||+++++....+.... . ....
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lkp-GG~l~l~~~~~~~~~~-~------------------g~~~ 204 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRK-EFQYLVAVLSYDPTKH-A------------------GPPF 204 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEE-EEEEEEEEEECCTTSC-C------------------CSSC
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCC-CeEEEEEEEecCCccC-C------------------CCCC
Confidence 43 459999999999999988888999999999999 9999876655432111 0 0111
Q ss_pred cCCHHHHHHHHHHcCCceeEEEEc
Q 018565 320 ERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 320 ~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
..+.+++.++++. +|++......
T Consensus 205 ~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 205 YVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp CCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred CCCHHHHHHHhhC-CeEEEEEecc
Confidence 2579999999988 5998877554
No 71
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=2e-15 Score=132.28 Aligned_cols=151 Identities=16% Similarity=0.155 Sum_probs=109.8
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---CCCeEEeecCCCC-CCC-------cceEEEec
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---CHGVEHVGGDMFD-GVP-------EADAAIIK 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~v~~~~~d~~~-~~~-------~~D~i~~~ 254 (354)
..+..+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ..+++++.+|+.+ +.+ .||+|++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 45678999999999999999999977 8999999 888888765 4589999999998 322 28999999
Q ss_pred cccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhh--hhhccHH-hhcccCCcccCCHHHHHHHHH
Q 018565 255 WVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSV--RLMLDMV-MMAHTNKGKERSLKEWDYVLR 331 (354)
Q Consensus 255 ~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~--~~~~~l~-~~~~~~~g~~~t~~e~~~ll~ 331 (354)
.++|++++++..++|++++++||| ||++++++...++... ....... .....+. ..........++.+++.++|
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGK-QGAMYLIELGTGCIDF-FNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF- 208 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTT-TCEEEEEEECTTHHHH-HHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC-
T ss_pred chhhcCCHHHHHHHHHHHHHHcCC-CCEEEEEeCCccccHH-HHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh-
Confidence 999999988889999999999999 9999999875432110 0000000 0000000 00000112346899999999
Q ss_pred HcCCceeEEEEc
Q 018565 332 QAGFSRYNITSI 343 (354)
Q Consensus 332 ~aGf~~~~~~~~ 343 (354)
+||++++...+
T Consensus 209 -aGf~~~~~~~~ 219 (245)
T 3ggd_A 209 -PDFEILSQGEG 219 (245)
T ss_dssp -TTEEEEEEECC
T ss_pred -CCCEEEecccc
Confidence 99999886543
No 72
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.61 E-value=7.4e-15 Score=126.52 Aligned_cols=137 Identities=19% Similarity=0.138 Sum_probs=102.5
Q ss_pred CceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCC-CCC--cceEEEeccccccCChHHH
Q 018565 190 IETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFD-GVP--EADAAIIKWVLHDWGDDEC 265 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~~~~~~ 265 (354)
..+|||||||+|.++..+++. +++|+ +.+++.+++. ++++..+|+.+ +.+ .||+|++.+++|++++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~-- 118 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDDP-- 118 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCH--
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccCH--
Confidence 689999999999999888664 89999 8888888754 79999999887 554 49999999999998764
Q ss_pred HHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 266 IKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 266 ~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
.++|++++++|+| ||.+++.+..... . ......... ...........++.++|.++|+++||+++++...
T Consensus 119 ~~~l~~~~~~L~p-gG~l~i~~~~~~~--~----~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 119 ERALKEAYRILKK-GGYLIVGIVDRES--F----LGREYEKNK-EKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHHHEEE-EEEEEEEEECSSS--H----HHHHHHHTT-TC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHcCC-CcEEEEEEeCCcc--H----HHHHHHHHh-cCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 5899999999999 9999997753211 1 100000000 0000002235579999999999999999988765
No 73
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.59 E-value=2.1e-14 Score=120.75 Aligned_cols=125 Identities=19% Similarity=0.195 Sum_probs=105.1
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCC--cceEEEec-cccccCC
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVP--EADAAIIK-WVLHDWG 261 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~--~~D~i~~~-~~lh~~~ 261 (354)
.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++++..+|+.+ +.+ .||+|++. .++|+++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 46789999999999999999987 568999999 888888876 5679999999988 554 49999998 8999988
Q ss_pred hHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEEE
Q 018565 262 DDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNIT 341 (354)
Q Consensus 262 ~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 341 (354)
++....+|++++++|+| ||.+++.... ...++.+++.++++++||+++++.
T Consensus 123 ~~~~~~~l~~~~~~l~~-~G~l~~~~~~----------------------------~~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 123 EDGREPALANIHRALGA-DGRAVIGFGA----------------------------GRGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp HHHHHHHHHHHHHHEEE-EEEEEEEEET----------------------------TSSCCHHHHHHHHHHHTEEEEEEE
T ss_pred hHHHHHHHHHHHHHhCC-CCEEEEEeCC----------------------------CCCcCHHHHHHHHHHcCCEEeeee
Confidence 88888999999999999 9999885421 012468899999999999999875
Q ss_pred Ec
Q 018565 342 SI 343 (354)
Q Consensus 342 ~~ 343 (354)
..
T Consensus 174 ~~ 175 (195)
T 3cgg_A 174 ES 175 (195)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 74
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.59 E-value=1.5e-14 Score=125.01 Aligned_cols=155 Identities=14% Similarity=0.138 Sum_probs=109.8
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCC---CCC--cce
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFD---GVP--EAD 249 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~---~~~--~~D 249 (354)
...+++.++ .+..+|||||||+|.++..+++. + .+++++|+ +.+++.+++ ...++..+|+.+ +++ .||
T Consensus 22 ~~~l~~~~~---~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~fD 95 (230)
T 3cc8_A 22 NPNLLKHIK---KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKE-KLDHVVLGDIETMDMPYEEEQFD 95 (230)
T ss_dssp CHHHHTTCC---TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHT-TSSEEEESCTTTCCCCSCTTCEE
T ss_pred HHHHHHHhc---cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHH-hCCcEEEcchhhcCCCCCCCccC
Confidence 345555444 46689999999999999999988 4 89999999 888888875 224788888875 333 499
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhh-hhhccH---HhhcccCCcccCCHHH
Q 018565 250 AAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSV-RLMLDM---VMMAHTNKGKERSLKE 325 (354)
Q Consensus 250 ~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~-~~~~~l---~~~~~~~~g~~~t~~e 325 (354)
+|++..++|++++. ..+|++++++|+| ||.+++..+....... .... ...+.. ..... .....++.++
T Consensus 96 ~v~~~~~l~~~~~~--~~~l~~~~~~L~~-gG~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 167 (230)
T 3cc8_A 96 CVIFGDVLEHLFDP--WAVIEKVKPYIKQ-NGVILASIPNVSHISV----LAPLLAGNWTYTEYGLLDK-THIRFFTFNE 167 (230)
T ss_dssp EEEEESCGGGSSCH--HHHHHHTGGGEEE-EEEEEEEEECTTSHHH----HHHHHTTCCCCBSSSTTBT-TCCCCCCHHH
T ss_pred EEEECChhhhcCCH--HHHHHHHHHHcCC-CCEEEEEeCCcchHHH----HHHHhcCCceeccCCCCCc-ceEEEecHHH
Confidence 99999999998865 4899999999999 9999997643221000 0000 000000 00000 1224579999
Q ss_pred HHHHHHHcCCceeEEEEcC
Q 018565 326 WDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 326 ~~~ll~~aGf~~~~~~~~~ 344 (354)
|.++++++||+++++....
T Consensus 168 ~~~~l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 168 MLRMFLKAGYSISKVDRVY 186 (230)
T ss_dssp HHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHcCCeEEEEEecc
Confidence 9999999999999887753
No 75
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.59 E-value=1.2e-14 Score=128.44 Aligned_cols=146 Identities=16% Similarity=0.135 Sum_probs=105.2
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC--cceEEEecccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP--EADAAIIKWVL 257 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~--~~D~i~~~~~l 257 (354)
..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++++..+|+.+ +++ .||+|++..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 456789999999999999999987 578999999 888887764 4789999999987 554 49999999999
Q ss_pred ccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHh-hccc--CCcccCCHHHHHHHHHHcC
Q 018565 258 HDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVM-MAHT--NKGKERSLKEWDYVLRQAG 334 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~g~~~t~~e~~~ll~~aG 334 (354)
|++++. ..++++++++||| ||.+++. ...++ .. . .......+..+.. .... .....++.+++.++|+++|
T Consensus 115 ~~~~~~--~~~l~~~~~~L~p-gG~l~~~-~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 187 (263)
T 2yqz_A 115 HLVPDW--PKVLAEAIRVLKP-GGALLEG-WDQAE-AS-P-EWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLG 187 (263)
T ss_dssp GGCTTH--HHHHHHHHHHEEE-EEEEEEE-EEEEC-CC-H-HHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTT
T ss_pred hhcCCH--HHHHHHHHHHCCC-CcEEEEE-ecCCC-cc-H-HHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcC
Confidence 998754 5899999999999 9999987 22221 11 1 0000011111111 1110 0224567899999999999
Q ss_pred CceeEEE
Q 018565 335 FSRYNIT 341 (354)
Q Consensus 335 f~~~~~~ 341 (354)
|+++.+.
T Consensus 188 f~~~~~~ 194 (263)
T 2yqz_A 188 LKPRTRE 194 (263)
T ss_dssp CCCEEEE
T ss_pred CCcceEE
Confidence 9987653
No 76
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.58 E-value=4e-15 Score=126.95 Aligned_cols=152 Identities=10% Similarity=-0.007 Sum_probs=108.5
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC--cceEEEecccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP--EADAAIIKWVL 257 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~--~~D~i~~~~~l 257 (354)
..+..+|||+|||+|..+..++.. ++.+++++|. +.+++.+++ ..++++..+|+.+ +++ .||+|++..++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 345689999999999985555444 5679999999 888887764 4679999999988 554 49999999999
Q ss_pred ccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCce
Q 018565 258 HDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSR 337 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 337 (354)
|+++.++..+++++++++||| ||.+++.+...++... ..........+.............++.+++.+++++.||..
T Consensus 100 ~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~ 177 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKP-GGLACINFLTTKDERY-NKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLF 177 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEE-EEEEEEEEEETTSTTT-TCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCC-CcEEEEEEecccchhc-cchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCcee
Confidence 999878889999999999999 9999998876554321 10000000000000000001125668999999999999977
Q ss_pred eEEE
Q 018565 338 YNIT 341 (354)
Q Consensus 338 ~~~~ 341 (354)
.+..
T Consensus 178 ~~~~ 181 (209)
T 2p8j_A 178 KEDR 181 (209)
T ss_dssp EEEE
T ss_pred eeee
Confidence 6553
No 77
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.57 E-value=8.3e-15 Score=129.65 Aligned_cols=141 Identities=15% Similarity=0.101 Sum_probs=105.0
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---CC------------------------------
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---CH------------------------------ 232 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~------------------------------ 232 (354)
..++.+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 34568999999999999998888755 58999999 888887754 12
Q ss_pred --Ce-EEeecCCCC-CC------CcceEEEeccccccCCh--HHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcch
Q 018565 233 --GV-EHVGGDMFD-GV------PEADAAIIKWVLHDWGD--DECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKF 300 (354)
Q Consensus 233 --~v-~~~~~d~~~-~~------~~~D~i~~~~~lh~~~~--~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~ 300 (354)
++ ++..+|+.+ +. +.||+|++..++|++++ ++...+|++++++||| ||.+++.+..... . +
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp-gG~li~~~~~~~~--~----~ 205 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKP-GGFLVMVDALKSS--Y----Y 205 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE-EEEEEEEEESSCC--E----E
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCC-CcEEEEEecCCCc--e----E
Confidence 27 899999987 22 24999999999995433 3677999999999999 9999998743211 1 0
Q ss_pred hhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEEEEcC
Q 018565 301 KSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 301 ~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 344 (354)
. .. + .. ......+.+++.++|+++||+++++...+
T Consensus 206 ~-~~---~---~~--~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 206 M-IG---E---QK--FSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp E-ET---T---EE--EECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred E-cC---C---cc--ccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 0 00 0 00 11234589999999999999999987764
No 78
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.57 E-value=1.5e-14 Score=130.29 Aligned_cols=142 Identities=12% Similarity=0.067 Sum_probs=96.4
Q ss_pred CCCceEEEecCCccHHHH----HHHHHCCCCeE--EEeec-hHHhhhccc-------CCCeEE--eecCCCC-C------
Q 018565 188 DGIETLVDIGGNDGTTLR----TLTKAFPRIRG--INFDL-PHVVCVAEK-------CHGVEH--VGGDMFD-G------ 244 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~----~l~~~~p~~~~--~~~D~-~~~~~~a~~-------~~~v~~--~~~d~~~-~------ 244 (354)
.+..+|||||||+|.++. .+..++|+.++ +++|. ++|++.+++ ..++++ ..++..+ +
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 356799999999997654 44556788854 99999 888887764 134544 4455433 1
Q ss_pred C--CcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhc-ccCCcccC
Q 018565 245 V--PEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMA-HTNKGKER 321 (354)
Q Consensus 245 ~--~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~g~~~ 321 (354)
+ ..||+|++.+++|++++. .++|++++++||| ||++++.+... ... +.. .+....... .......+
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lkp-gG~l~i~~~~~--~~~----~~~--~~~~~~~~~~~~~~~~~~ 199 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDI--PATLKFFHSLLGT-NAKMLIIVVSG--SSG----WDK--LWKKYGSRFPQDDLCQYI 199 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCH--HHHHHHHHHTEEE-EEEEEEEEECT--TSH----HHH--HHHHHGGGSCCCTTCCCC
T ss_pred cCCCceeEEEEeeeeeecCCH--HHHHHHHHHHcCC-CcEEEEEEecC--Ccc----HHH--HHHHHHHhccCCCcccCC
Confidence 2 249999999999999875 4889999999999 99999986431 111 110 010110000 00112457
Q ss_pred CHHHHHHHHHHcCCceeEE
Q 018565 322 SLKEWDYVLRQAGFSRYNI 340 (354)
Q Consensus 322 t~~e~~~ll~~aGf~~~~~ 340 (354)
+.++|.++|+++||+.++.
T Consensus 200 ~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 200 TSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp CHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHCCCceEEE
Confidence 8999999999999998763
No 79
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.56 E-value=4.2e-15 Score=131.81 Aligned_cols=141 Identities=16% Similarity=0.040 Sum_probs=100.3
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----C------------------------------
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----C------------------------------ 231 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~------------------------------ 231 (354)
..++.+|||||||+|.++..++.... .+++++|+ +.+++.+++ .
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 34678999999999987766554421 26999999 888886653 0
Q ss_pred -CCeE-EeecCCCCC-------CCcceEEEeccccccCC--hHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcch
Q 018565 232 -HGVE-HVGGDMFDG-------VPEADAAIIKWVLHDWG--DDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKF 300 (354)
Q Consensus 232 -~~v~-~~~~d~~~~-------~~~~D~i~~~~~lh~~~--~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~ 300 (354)
.+++ +..+|+.++ .++||+|+++.+||+.. .++..++|++++++||| ||.+++.+..... . +
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKP-GG~li~~~~~~~~--~----~ 204 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKP-GGHLVTTVTLRLP--S----Y 204 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE-EEEEEEEEESSCC--E----E
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCC-CcEEEEEEeecCc--c----c
Confidence 1233 888998872 23599999999999852 35667899999999999 9999998653211 0 0
Q ss_pred hhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEEEEcC
Q 018565 301 KSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 301 ~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 344 (354)
...-. . .....++.+++.++|+++||+++++...+
T Consensus 205 -----~~g~~--~--~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 205 -----MVGKR--E--FSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp -----EETTE--E--EECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred -----eeCCe--E--eeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 00000 0 11124589999999999999999887653
No 80
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.56 E-value=2.1e-14 Score=129.33 Aligned_cols=154 Identities=12% Similarity=0.036 Sum_probs=109.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CC-C--cceEEEecc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GV-P--EADAAIIKW 255 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~-~--~~D~i~~~~ 255 (354)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ ..+++++.+|+.+ ++ + .||+|++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 46789999999999999998776 4568999999 888887765 2479999999988 55 2 499999999
Q ss_pred cccc--CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCC-------CCCcc-h----------hh-hhhhccHHh--h
Q 018565 256 VLHD--WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDD-------GVDNK-F----------KS-VRLMLDMVM--M 312 (354)
Q Consensus 256 ~lh~--~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~-------~~~~~-~----------~~-~~~~~~l~~--~ 312 (354)
++|+ .+.++..++|++++++|+| ||.+++..+...... . ..+ + +. ....+.+.. .
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 219 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRP-GGYFIMTVPSRDVILERYKQGRM-SNDFYKIELEKMEDVPMESVREYRFTLLDS 219 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEE-EEEEEEEEECHHHHHHHHHHTCC-BCSSEEEECCCCSSCCTTTCCEEEEEETTS
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCC-CCEEEEEECCHHHHHHHHccCcc-CCeeEEEEeCccccccccccceEEEEEchh
Confidence 9998 5667788999999999999 999998775421100 0 000 0 00 000000000 0
Q ss_pred cccCCcccCCHHHHHHHHHHcCCceeEEEEcC
Q 018565 313 AHTNKGKERSLKEWDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 313 ~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 344 (354)
........++.+++.++++++||+++++....
T Consensus 220 ~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 220 VNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp CSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred hcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 00011245689999999999999999987753
No 81
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.55 E-value=1.3e-14 Score=127.82 Aligned_cols=96 Identities=19% Similarity=0.149 Sum_probs=84.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCC-CCC--cceEEEeccccccCChHH
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFD-GVP--EADAAIIKWVLHDWGDDE 264 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~~~~~ 264 (354)
...+|||||||+|..+..|++.+ .+++++|+ +.+++.+++.++++++.+|+.+ +++ .||+|++..++|+++.+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~- 115 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD- 115 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHH-
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHH-
Confidence 45799999999999999999875 58999999 9999999888899999999988 665 49999999999987643
Q ss_pred HHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 265 CIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 265 ~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
+++++++++||| ||.|++.....
T Consensus 116 --~~~~e~~rvLkp-gG~l~~~~~~~ 138 (257)
T 4hg2_A 116 --RFWAELRRVARP-GAVFAAVTYGL 138 (257)
T ss_dssp --HHHHHHHHHEEE-EEEEEEEEECC
T ss_pred --HHHHHHHHHcCC-CCEEEEEECCC
Confidence 689999999999 99999887543
No 82
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.55 E-value=4e-15 Score=133.89 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=84.1
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCC-C---CC--cce
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFD-G---VP--EAD 249 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~-~---~~--~~D 249 (354)
..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++.+..+|+.+ + ++ .||
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD 132 (293)
T 3thr_A 55 QHGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFD 132 (293)
T ss_dssp HTTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeE
Confidence 345689999999999999999987 459999999 888887753 2578889999887 4 33 499
Q ss_pred EEEec-cccccCCh-----HHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 250 AAIIK-WVLHDWGD-----DECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 250 ~i~~~-~~lh~~~~-----~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
+|++. +++|++++ ++..++|++++++||| ||.+++...
T Consensus 133 ~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~ 176 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP-GGLLVIDHR 176 (293)
T ss_dssp EEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE-EEEEEEEEE
T ss_pred EEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC-CeEEEEEeC
Confidence 99998 99999988 6788999999999999 999998764
No 83
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.54 E-value=5.6e-14 Score=126.86 Aligned_cols=99 Identities=20% Similarity=0.180 Sum_probs=85.7
Q ss_pred CCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhccc--------CCCeEEeecCCCC-CC--------Ccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEK--------CHGVEHVGGDMFD-GV--------PEA 248 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~--------~~~v~~~~~d~~~-~~--------~~~ 248 (354)
.+..+|||||||+|..+..+++.+ +..+++++|+ +.+++.+++ ..+++++.+|+.+ ++ ..|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 467899999999999999999987 8999999999 888888764 4689999999988 42 359
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
|+|++..++|++ +..+++++++++|+| ||.+++.+...
T Consensus 115 D~V~~~~~l~~~---~~~~~l~~~~~~Lkp-gG~l~i~~~~~ 152 (299)
T 3g5t_A 115 DMITAVECAHWF---DFEKFQRSAYANLRK-DGTIAIWGYAD 152 (299)
T ss_dssp EEEEEESCGGGS---CHHHHHHHHHHHEEE-EEEEEEEEEEE
T ss_pred eEEeHhhHHHHh---CHHHHHHHHHHhcCC-CcEEEEEecCC
Confidence 999999999998 356899999999999 99999965443
No 84
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.54 E-value=4e-14 Score=126.92 Aligned_cols=132 Identities=14% Similarity=0.092 Sum_probs=105.2
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC-cceEEEecccccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP-EADAAIIKWVLHD 259 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~-~~D~i~~~~~lh~ 259 (354)
.+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ..++++..+|+.+ +.+ .||+|++..++|+
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMF 196 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchhh
Confidence 36789999999999999999987 569999999 888887765 3389999999988 444 4999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeE
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYN 339 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 339 (354)
++++....++++++++|+| ||.++++.....+... .+ . .....++.+++.++++. |+++.
T Consensus 197 ~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~-~~---------------~-~~~~~~~~~~l~~~~~~--~~~~~ 256 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNV-GGYNLIVAAMSTDDVP-CP---------------L-PFSFTFAENELKEYYKD--WEFLE 256 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEE-EEEEEEEEEBCCSSSC-CS---------------S-CCSCCBCTTHHHHHTTT--SEEEE
T ss_pred CCHHHHHHHHHHHHHhcCC-CcEEEEEEecCCCCCC-CC---------------C-CccccCCHHHHHHHhcC--CEEEE
Confidence 9988899999999999999 9998887765544322 10 0 12235567888888855 88877
Q ss_pred EE
Q 018565 340 IT 341 (354)
Q Consensus 340 ~~ 341 (354)
..
T Consensus 257 ~~ 258 (286)
T 3m70_A 257 YN 258 (286)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 85
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.54 E-value=7.3e-14 Score=119.79 Aligned_cols=122 Identities=14% Similarity=0.135 Sum_probs=96.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhcccCCCeEEeecCCCC-CCC--cceEEEeccccccCChHH
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFD-GVP--EADAAIIKWVLHDWGDDE 264 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~~~~~ 264 (354)
.+..+|||||||+|.++..+. .+++++|+... ++++..+|+.+ +++ .||+|++..++|+ + +
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~--~ 129 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG-T--N 129 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS--------STTEEESCTTSCSCCTTCEEEEEEESCCCS-S--C
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC--------CceEEEeccccCCCCCCCEeEEEEehhccc-c--C
Confidence 456899999999999988772 68999998322 57888999887 554 4999999999984 3 3
Q ss_pred HHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEEEEcC
Q 018565 265 CIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 265 ~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 344 (354)
...+|++++++|+| ||.+++.+... ...+.++|.++++++||++++....+
T Consensus 130 ~~~~l~~~~~~L~~-gG~l~i~~~~~----------------------------~~~~~~~~~~~l~~~Gf~~~~~~~~~ 180 (215)
T 2zfu_A 130 IRDFLEEANRVLKP-GGLLKVAEVSS----------------------------RFEDVRTFLRAVTKLGFKIVSKDLTN 180 (215)
T ss_dssp HHHHHHHHHHHEEE-EEEEEEEECGG----------------------------GCSCHHHHHHHHHHTTEEEEEEECCS
T ss_pred HHHHHHHHHHhCCC-CeEEEEEEcCC----------------------------CCCCHHHHHHHHHHCCCEEEEEecCC
Confidence 46899999999999 99999976321 01168999999999999999876666
Q ss_pred CceeEEEEeC
Q 018565 345 AVQSLIEAFP 354 (354)
Q Consensus 345 ~~~~~i~~~~ 354 (354)
....++.++|
T Consensus 181 ~~~~~~~~~k 190 (215)
T 2zfu_A 181 SHFFLFDFQK 190 (215)
T ss_dssp TTCEEEEEEE
T ss_pred CeEEEEEEEe
Confidence 6666666653
No 86
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=2.7e-13 Score=119.10 Aligned_cols=104 Identities=18% Similarity=0.292 Sum_probs=84.6
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC-cce
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP-EAD 249 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~-~~D 249 (354)
.++.... ..+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++.+|+.+ +.+ +||
T Consensus 32 ~~~~~~~--~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD 107 (252)
T 1wzn_A 32 EIFKEDA--KREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFD 107 (252)
T ss_dssp HHHHHTC--SSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEE
T ss_pred HHHHHhc--ccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCcc
Confidence 3444444 456689999999999999999986 679999999 888888764 3579999999988 544 499
Q ss_pred EEEec-cccccCChHHHHHHHHHHHHhcCCCCceEEEE
Q 018565 250 AAIIK-WVLHDWGDDECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 250 ~i~~~-~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
+|++. ..+++++.++..++|++++++|+| ||.+++.
T Consensus 108 ~v~~~~~~~~~~~~~~~~~~l~~~~~~L~p-gG~li~~ 144 (252)
T 1wzn_A 108 AVTMFFSTIMYFDEEDLRKLFSKVAEALKP-GGVFITD 144 (252)
T ss_dssp EEEECSSGGGGSCHHHHHHHHHHHHHHEEE-EEEEEEE
T ss_pred EEEEcCCchhcCCHHHHHHHHHHHHHHcCC-CeEEEEe
Confidence 99986 566777777889999999999999 9988763
No 87
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.53 E-value=4.1e-14 Score=133.79 Aligned_cols=150 Identities=15% Similarity=0.142 Sum_probs=108.7
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCC------CC--C
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFD------GV--P 246 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~------~~--~ 246 (354)
...+++.+. ..+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++. .+......+.. ++ .
T Consensus 96 ~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~~ 170 (416)
T 4e2x_A 96 ARDFLATEL--TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTEG 170 (416)
T ss_dssp HHHHHHTTT--CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHHC
T ss_pred HHHHHHHhC--CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCCC
Confidence 355666666 667889999999999999999986 559999999 8888888753 33333322221 11 3
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHH
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEW 326 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~ 326 (354)
+||+|++.+++||+++ ...+|++++++||| ||.+++..+...... ....+..... .....++.++|
T Consensus 171 ~fD~I~~~~vl~h~~d--~~~~l~~~~r~Lkp-gG~l~i~~~~~~~~~----------~~~~~~~~~~-~~~~~~s~~~l 236 (416)
T 4e2x_A 171 PANVIYAANTLCHIPY--VQSVLEGVDALLAP-DGVFVFEDPYLGDIV----------AKTSFDQIFD-EHFFLFSATSV 236 (416)
T ss_dssp CEEEEEEESCGGGCTT--HHHHHHHHHHHEEE-EEEEEEEEECHHHHH----------HHTCGGGCST-TCCEECCHHHH
T ss_pred CEEEEEECChHHhcCC--HHHHHHHHHHHcCC-CeEEEEEeCChHHhh----------hhcchhhhhh-hhhhcCCHHHH
Confidence 5999999999999985 46899999999999 999998654322100 0001111111 33456799999
Q ss_pred HHHHHHcCCceeEEEEcC
Q 018565 327 DYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 327 ~~ll~~aGf~~~~~~~~~ 344 (354)
.++++++||+++++...+
T Consensus 237 ~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 237 QGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp HHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHcCCEEEEEEEcc
Confidence 999999999999998875
No 88
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.53 E-value=1.2e-13 Score=119.79 Aligned_cols=140 Identities=16% Similarity=0.174 Sum_probs=101.9
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCCC-----C-CcceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFDG-----V-PEADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~~-----~-~~~D~i~~~~ 255 (354)
+.+..+|||+|||+|.++..+++.++..+++++|+ +.+++.+++ ..++.++.+|+.++ . ..||+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~--- 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY--- 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE---
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE---
Confidence 55778999999999999999999988789999999 888776543 47899999998762 2 2499998
Q ss_pred ccccCChH-HHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcC
Q 018565 256 VLHDWGDD-ECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAG 334 (354)
Q Consensus 256 ~lh~~~~~-~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aG 334 (354)
|++++. ....+++++.+.||| ||.+++. ........ ..+ . .....+++. +|+++|
T Consensus 149 --~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~-~~~~~~~~-~~~---------~---------~~~~~~~l~-~l~~~G 204 (230)
T 1fbn_A 149 --EDVAQPNQAEILIKNAKWFLKK-GGYGMIA-IKARSIDV-TKD---------P---------KEIFKEQKE-ILEAGG 204 (230)
T ss_dssp --ECCCSTTHHHHHHHHHHHHEEE-EEEEEEE-EEGGGTCS-SSC---------H---------HHHHHHHHH-HHHHHT
T ss_pred --EecCChhHHHHHHHHHHHhCCC-CcEEEEE-EecCCCCC-CCC---------H---------HHhhHHHHH-HHHHCC
Confidence 444433 446779999999999 9999997 22211111 100 0 011246777 899999
Q ss_pred CceeEEEEcCCc---eeEEEEe
Q 018565 335 FSRYNITSIHAV---QSLIEAF 353 (354)
Q Consensus 335 f~~~~~~~~~~~---~~~i~~~ 353 (354)
|+.+++.++..+ +.++.++
T Consensus 205 f~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 205 FKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp EEEEEEEECTTTSTTEEEEEEE
T ss_pred CEEEEEEccCCCccceEEEEEE
Confidence 999999887554 6666654
No 89
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.51 E-value=1.9e-13 Score=115.95 Aligned_cols=133 Identities=8% Similarity=0.034 Sum_probs=101.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC--cceEEEecccccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP--EADAAIIKWVLHD 259 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~ 259 (354)
+. +|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..++++..+|+.+ +++ .||+|++. +.+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~ 104 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCH 104 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCC
T ss_pred CC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhc
Confidence 44 9999999999999999886 569999999 888887765 3489999999988 544 49999984 344
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeE
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYN 339 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 339 (354)
++.+....+|++++++|+| ||.+++.+........ . .. ........++.+++.++|+ ||++++
T Consensus 105 ~~~~~~~~~l~~~~~~L~p-gG~l~~~~~~~~~~~~--------~--~~----~~~~~~~~~~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 105 LPSSLRQQLYPKVYQGLKP-GGVFILEGFAPEQLQY--------N--TG----GPKDLDLLPKLETLQSELP--SLNWLI 167 (202)
T ss_dssp CCHHHHHHHHHHHHTTCCS-SEEEEEEEECTTTGGG--------T--SC----CSSSGGGCCCHHHHHHHCS--SSCEEE
T ss_pred CCHHHHHHHHHHHHHhcCC-CcEEEEEEeccccccC--------C--CC----CCCcceeecCHHHHHHHhc--CceEEE
Confidence 5777788999999999999 9999998765322100 0 00 0001124679999999999 999998
Q ss_pred EEEc
Q 018565 340 ITSI 343 (354)
Q Consensus 340 ~~~~ 343 (354)
+...
T Consensus 168 ~~~~ 171 (202)
T 2kw5_A 168 ANNL 171 (202)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 90
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.51 E-value=1.9e-14 Score=129.36 Aligned_cols=139 Identities=16% Similarity=0.070 Sum_probs=97.9
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--CC---------------------------------
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--CH--------------------------------- 232 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~--------------------------------- 232 (354)
++.+|||||||+|.+. .++...+..+++++|+ +.+++.+++ ..
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 5689999999999944 3343345569999999 888876653 10
Q ss_pred -CeEEeecCCCC--C-----CC--cceEEEeccccccCChH--HHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcch
Q 018565 233 -GVEHVGGDMFD--G-----VP--EADAAIIKWVLHDWGDD--ECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKF 300 (354)
Q Consensus 233 -~v~~~~~d~~~--~-----~~--~~D~i~~~~~lh~~~~~--~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~ 300 (354)
.++++.+|+.+ + ++ .||+|++..++|+++++ +..++|++++++||| ||++++.+..... ..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lkp-GG~l~~~~~~~~~-~~----- 222 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRP-GGHLLLIGALEES-WY----- 222 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE-EEEEEEEEEESCC-EE-----
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCC-CCEEEEEEecCcc-eE-----
Confidence 14566668876 2 22 29999999999985533 677999999999999 9999998643211 00
Q ss_pred hhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEEEEcC
Q 018565 301 KSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 301 ~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 344 (354)
. . .+ .. .....++.++|.++|+++||+++++...+
T Consensus 223 ~-~---~~----~~-~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 223 L-A---GE----AR-LTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp E-E---TT----EE-EECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred E-c---CC----ee-eeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 0 0 00 00 11235689999999999999999876654
No 91
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.50 E-value=1.6e-13 Score=120.44 Aligned_cols=141 Identities=18% Similarity=0.200 Sum_probs=102.4
Q ss_pred CCceEEEecCCc--cHHHHHH-HHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCC---------Ccce
Q 018565 189 GIETLVDIGGND--GTTLRTL-TKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGV---------PEAD 249 (354)
Q Consensus 189 ~~~~vLDvG~G~--G~~~~~l-~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~---------~~~D 249 (354)
+..+|||||||+ +..+..+ .+..|+.+++++|. |.|++.++. ..+++|+.+|+.++. ..+|
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 567999999997 4344444 45689999999999 999999875 247999999998730 1255
Q ss_pred -----EEEeccccccCChHH-HHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCH
Q 018565 250 -----AAIIKWVLHDWGDDE-CIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSL 323 (354)
Q Consensus 250 -----~i~~~~~lh~~~~~~-~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~ 323 (354)
+++++.+||++++.+ ...++++++++|+| ||.|++.+...+.... . .....+.....- .....||.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~P-GG~Lvls~~~~d~~p~----~--~~~~~~~~~~~g-~p~~~rs~ 229 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPS-GSYLAMSIGTAEFAPQ----E--VGRVAREYAARN-MPMRLRTH 229 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCT-TCEEEEEEECCTTSHH----H--HHHHHHHHHHTT-CCCCCCCH
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCC-CcEEEEEeccCCCCHH----H--HHHHHHHHHhcC-CCCccCCH
Confidence 688999999999875 57899999999999 9999998876542111 0 111112221111 22466899
Q ss_pred HHHHHHHHHcCCceeE
Q 018565 324 KEWDYVLRQAGFSRYN 339 (354)
Q Consensus 324 ~e~~~ll~~aGf~~~~ 339 (354)
+|+.++|. ||++++
T Consensus 230 ~ei~~~f~--Glelve 243 (277)
T 3giw_A 230 AEAEEFFE--GLELVE 243 (277)
T ss_dssp HHHHHTTT--TSEECT
T ss_pred HHHHHHhC--CCcccC
Confidence 99999994 998765
No 92
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.49 E-value=3.4e-14 Score=121.90 Aligned_cols=99 Identities=16% Similarity=0.199 Sum_probs=85.0
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CC-CcceEEEecccccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GV-PEADAAIIKWVLHD 259 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~-~~~D~i~~~~~lh~ 259 (354)
..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..+++++.+|+.+ +. ..||+|++..++|+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 4567899999999999999999874 58999999 888888765 3589999999998 42 24999999999999
Q ss_pred CCh-HHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 260 WGD-DECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 260 ~~~-~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
+++ +...++|++++++||| ||.+++...
T Consensus 127 ~~~~~~~~~~l~~~~~~L~p-gG~l~~~~~ 155 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAP-GGHLVFGSA 155 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEE-EEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCC-CCEEEEEec
Confidence 986 5567899999999999 999998665
No 93
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.49 E-value=2e-13 Score=116.15 Aligned_cols=130 Identities=13% Similarity=0.097 Sum_probs=105.5
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCC-CcceEEEecccccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGV-PEADAAIIKWVLHD 259 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~-~~~D~i~~~~~lh~ 259 (354)
.+..+|||+|||+|.++..+++ .+..+++++|+ +.+++.+++ ..++++..+|+.+.. ..||+|++..++|+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI 137 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH
Confidence 3568999999999999999776 56779999999 888887765 234999999998843 45999999887764
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeE
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYN 339 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 339 (354)
...+++++.++|+| ||.+++.+.... +.+++.++++++||+.++
T Consensus 138 -----~~~~l~~~~~~L~~-gG~l~~~~~~~~------------------------------~~~~~~~~~~~~Gf~~~~ 181 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNE-DGQVIFSGIDYL------------------------------QLPKIEQALAENSFQIDL 181 (205)
T ss_dssp -----HHHHGGGSGGGEEE-EEEEEEEEEEGG------------------------------GHHHHHHHHHHTTEEEEE
T ss_pred -----HHHHHHHHHHhcCC-CCEEEEEecCcc------------------------------cHHHHHHHHHHcCCceEE
Confidence 46889999999999 999998654210 367788999999999999
Q ss_pred EEEcCCceeEEEEeC
Q 018565 340 ITSIHAVQSLIEAFP 354 (354)
Q Consensus 340 ~~~~~~~~~~i~~~~ 354 (354)
+.......+++.-+|
T Consensus 182 ~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 182 KMRAGRWIGLAISRK 196 (205)
T ss_dssp EEEETTEEEEEEEEC
T ss_pred eeccCCEEEEEEecc
Confidence 988888888877654
No 94
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.49 E-value=7.2e-13 Score=112.64 Aligned_cols=124 Identities=14% Similarity=0.209 Sum_probs=98.9
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCC---CCc
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDG---VPE 247 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~---~~~ 247 (354)
.++..+. ..+..+|||+|||+|.++..+++.+|..+++++|+ +++++.+++ .++++++.+|+.+. .+.
T Consensus 31 ~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 108 (204)
T 3e05_A 31 VTLSKLR--LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPD 108 (204)
T ss_dssp HHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCC
T ss_pred HHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCC
Confidence 3444455 56778999999999999999999999999999999 888888765 36899999999773 245
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHH
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWD 327 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~ 327 (354)
||+|++...++ ...++++++.++|+| ||++++..... .+.+++.
T Consensus 109 ~D~i~~~~~~~-----~~~~~l~~~~~~Lkp-gG~l~~~~~~~------------------------------~~~~~~~ 152 (204)
T 3e05_A 109 PDRVFIGGSGG-----MLEEIIDAVDRRLKS-EGVIVLNAVTL------------------------------DTLTKAV 152 (204)
T ss_dssp CSEEEESCCTT-----CHHHHHHHHHHHCCT-TCEEEEEECBH------------------------------HHHHHHH
T ss_pred CCEEEECCCCc-----CHHHHHHHHHHhcCC-CeEEEEEeccc------------------------------ccHHHHH
Confidence 99999988776 345899999999999 99999854221 0256778
Q ss_pred HHHHHcCCceeEE
Q 018565 328 YVLRQAGFSRYNI 340 (354)
Q Consensus 328 ~ll~~aGf~~~~~ 340 (354)
++++++|| .+++
T Consensus 153 ~~l~~~g~-~~~~ 164 (204)
T 3e05_A 153 EFLEDHGY-MVEV 164 (204)
T ss_dssp HHHHHTTC-EEEE
T ss_pred HHHHHCCC-ceeE
Confidence 88999998 4443
No 95
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.48 E-value=1.1e-13 Score=118.95 Aligned_cols=143 Identities=9% Similarity=0.034 Sum_probs=95.7
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhh----ccc------CCCeEEeecCCCC-CCCc-ceEEEe
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCV----AEK------CHGVEHVGGDMFD-GVPE-ADAAII 253 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~----a~~------~~~v~~~~~d~~~-~~~~-~D~i~~ 253 (354)
..+..+|||||||+|.++..+++.+|+.+++++|+ +.+++. +++ .++++++.+|+.+ +++. .|.|++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~ 104 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHV 104 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEE
Confidence 45678999999999999999999999999999999 776664 221 3589999999988 5441 265552
Q ss_pred ---ccccc--cCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHH
Q 018565 254 ---KWVLH--DWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDY 328 (354)
Q Consensus 254 ---~~~lh--~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ 328 (354)
...+| ++++. ..+|++++++||| ||.+++......-... .. .+. ........+..+++..
T Consensus 105 ~~~~~~~~~~~~~~~--~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~----~~------~~~--~~~~~~~~~~~~~l~~ 169 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSS--PEMLRGMAAVCRP-GASFLVALNLHAWRPS----VP------EVG--EHPEPTPDSADEWLAP 169 (218)
T ss_dssp ESCCHHHHHHHHTSS--SHHHHHHHHTEEE-EEEEEEEEEGGGBTTB----CG------GGT--TCCCCCHHHHHHHHHH
T ss_pred EccchhhhhhhhccH--HHHHHHHHHHcCC-CcEEEEEecccccccc----cc------ccc--cCCccchHHHHHHHHH
Confidence 22221 33333 5889999999999 9999884322111111 00 000 0001112223556888
Q ss_pred HHHHcCCceeEEEEcC
Q 018565 329 VLRQAGFSRYNITSIH 344 (354)
Q Consensus 329 ll~~aGf~~~~~~~~~ 344 (354)
+++++||++.++..+.
T Consensus 170 ~l~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 170 RYAEAGWKLADCRYLE 185 (218)
T ss_dssp HHHHTTEEEEEEEEEC
T ss_pred HHHHcCCCceeeeccc
Confidence 9999999999887654
No 96
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.46 E-value=1.5e-13 Score=118.72 Aligned_cols=146 Identities=15% Similarity=0.110 Sum_probs=93.0
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec--hHHhhhc---cc------CCCeEEeecCCCC-CCCcceEEEecc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL--PHVVCVA---EK------CHGVEHVGGDMFD-GVPEADAAIIKW 255 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~--~~~~~~a---~~------~~~v~~~~~d~~~-~~~~~D~i~~~~ 255 (354)
.+..+|||||||+|.++..++++.|+.+++++|+ +.+++.| ++ ..++++..+|..+ +...+|.|.+..
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 4668999999999999999999899999999999 3444443 43 3579999999877 322246555554
Q ss_pred ccccCChHH------HHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHH
Q 018565 256 VLHDWGDDE------CIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYV 329 (354)
Q Consensus 256 ~lh~~~~~~------~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~l 329 (354)
+.+.|+... ...+|++++++||| ||++++....... .. ..+. ...... . ........+++.++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~Lkp-GG~l~i~~~~~~~-~~-~~~~----~~~~~~---~-~~~~~~~~~el~~~ 171 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKK-EAHFEFVTTYSDS-YE-EAEI----KKRGLP---L-LSKAYFLSEQYKAE 171 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEE-EEEEEEEECCCC------------------------CCHHHHHSHHHHHH
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCC-CcEEEEEEecccc-ch-hchh----hhcCCC---C-CChhhcchHHHHHH
Confidence 444443321 13689999999999 9999984433222 11 1000 000000 0 00011122359999
Q ss_pred HHHcCCceeEEEEcC
Q 018565 330 LRQAGFSRYNITSIH 344 (354)
Q Consensus 330 l~~aGf~~~~~~~~~ 344 (354)
++++||++.++...+
T Consensus 172 l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 172 LSNSGFRIDDVKELD 186 (225)
T ss_dssp HHHHTCEEEEEEEEC
T ss_pred HHHcCCCeeeeeecC
Confidence 999999998887654
No 97
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.46 E-value=1e-12 Score=108.55 Aligned_cols=117 Identities=16% Similarity=0.184 Sum_probs=95.8
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCCCCC--cceEEEeccccccCChH--
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFDGVP--EADAAIIKWVLHDWGDD-- 263 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~--~~D~i~~~~~lh~~~~~-- 263 (354)
+..+|||+|||+|.++..+++.. +++++|+ +.+++. ..++++..+|+.++.+ .||+|+++..+|..++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~~ 96 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDPI 96 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCTT
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCcccc
Confidence 45699999999999999999876 9999999 888887 5789999999998654 49999998888865443
Q ss_pred -----HHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCcee
Q 018565 264 -----ECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRY 338 (354)
Q Consensus 264 -----~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 338 (354)
....+++++.+.+ | ||.+++++... .+.+++.++++++||+..
T Consensus 97 ~~~~~~~~~~~~~~~~~l-p-gG~l~~~~~~~------------------------------~~~~~l~~~l~~~gf~~~ 144 (170)
T 3q87_B 97 IGGGYLGREVIDRFVDAV-T-VGMLYLLVIEA------------------------------NRPKEVLARLEERGYGTR 144 (170)
T ss_dssp TBCCGGGCHHHHHHHHHC-C-SSEEEEEEEGG------------------------------GCHHHHHHHHHHTTCEEE
T ss_pred ccCCcchHHHHHHHHhhC-C-CCEEEEEEecC------------------------------CCHHHHHHHHHHCCCcEE
Confidence 3467888999888 9 99999866311 136788899999999998
Q ss_pred EEEEc
Q 018565 339 NITSI 343 (354)
Q Consensus 339 ~~~~~ 343 (354)
.+...
T Consensus 145 ~~~~~ 149 (170)
T 3q87_B 145 ILKVR 149 (170)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 88765
No 98
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.45 E-value=2e-13 Score=125.80 Aligned_cols=112 Identities=13% Similarity=0.139 Sum_probs=90.3
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---------------CCCeEEeecC
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---------------CHGVEHVGGD 240 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------------~~~v~~~~~d 240 (354)
..+++.+. ..+..+|||||||+|..+..++...+..+++++|+ +.+++.|++ ..+|+|+.+|
T Consensus 163 ~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 163 AQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 34445455 66789999999999999999998887667999999 777665542 2689999999
Q ss_pred CCC-CC----CcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCC
Q 018565 241 MFD-GV----PEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDD 294 (354)
Q Consensus 241 ~~~-~~----~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~ 294 (354)
+.+ ++ +.+|+|+++++++ . ++..+.|+++++.||| ||+|++.|.+.+++.
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~F--~-pdl~~aL~Ei~RvLKP-GGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFAF--G-PEVDHQLKERFANMKE-GGRIVSSKPFAPLNF 295 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTTC--C-HHHHHHHHHHHTTSCT-TCEEEESSCSSCTTC
T ss_pred ccCCccccccCCccEEEEccccc--C-chHHHHHHHHHHcCCC-CcEEEEeecccCCCC
Confidence 998 54 3599999987764 2 4556788999999999 999999998887654
No 99
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.45 E-value=2.7e-13 Score=115.85 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=95.4
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCC-eEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCC--cceEEEeccccccCCh
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRI-RGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVP--EADAAIIKWVLHDWGD 262 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~~~ 262 (354)
+..+|||||||+|.++..+ +. +++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++..++|++++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 110 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVED 110 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSC
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCC
Confidence 6789999999999998877 45 8999999 888888875 4689999999988 554 4999999999999875
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcc--cCCcccCCHHHHHHHHHHcC
Q 018565 263 DECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAH--TNKGKERSLKEWDYVLRQAG 334 (354)
Q Consensus 263 ~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~g~~~t~~e~~~ll~~aG 334 (354)
. .++|++++++||| ||.+++.+...... +... ......... ....+.++.+++.++|+ |
T Consensus 111 ~--~~~l~~~~~~L~p-gG~l~i~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 111 V--ERVLLEARRVLRP-GGALVVGVLEALSP------WAAL--YRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp H--HHHHHHHHHHEEE-EEEEEEEEECTTSH------HHHH--HHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred H--HHHHHHHHHHcCC-CCEEEEEecCCcCc------HHHH--HHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 4 5899999999999 99999987542211 1100 000000000 01235679999999998 7
No 100
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.45 E-value=2.9e-14 Score=124.34 Aligned_cols=133 Identities=14% Similarity=-0.005 Sum_probs=91.5
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC---CCC--cceEEEe---
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD---GVP--EADAAII--- 253 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~---~~~--~~D~i~~--- 253 (354)
.++.+|||||||+|..+..+++..|. +++++|+ |.+++.+++ ..+++++.+|... +.+ +||.|++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 46789999999999999999887664 7899999 999998875 5678888888654 333 4888864
Q ss_pred --ccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHH
Q 018565 254 --KWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLR 331 (354)
Q Consensus 254 --~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~ 331 (354)
...+++++ +...++++++++||| ||++++.+........ ...++ .-.....+.+...|.
T Consensus 138 ~~~~~~~~~~--~~~~~~~e~~rvLkP-GG~l~f~~~~~~~~~~--------~~~~~--------~~~~~~~~~~~~~L~ 198 (236)
T 3orh_A 138 PLSEETWHTH--QFNFIKNHAFRLLKP-GGVLTYCNLTSWGELM--------KSKYS--------DITIMFEETQVPALL 198 (236)
T ss_dssp CCBGGGTTTH--HHHHHHHTHHHHEEE-EEEEEECCHHHHHHHT--------TTTCS--------CHHHHHHHHTHHHHH
T ss_pred ecccchhhhc--chhhhhhhhhheeCC-CCEEEEEecCCchhhh--------hhhhh--------hhhhhhHHHHHHHHH
Confidence 44444443 456899999999999 9998875432211100 00000 001112456677888
Q ss_pred HcCCceeEE
Q 018565 332 QAGFSRYNI 340 (354)
Q Consensus 332 ~aGf~~~~~ 340 (354)
++||+...+
T Consensus 199 eaGF~~~~i 207 (236)
T 3orh_A 199 EAGFRRENI 207 (236)
T ss_dssp HHTCCGGGE
T ss_pred HcCCeEEEE
Confidence 999987654
No 101
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.45 E-value=1.1e-12 Score=118.27 Aligned_cols=153 Identities=12% Similarity=0.087 Sum_probs=100.1
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CC-------CeEEeecCCCC---------CCC
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CH-------GVEHVGGDMFD---------GVP 246 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~-------~v~~~~~d~~~---------~~~ 246 (354)
++.+|||||||+|..+..+++. ...+++++|+ +.+++.|++ .. +++|...|+.. +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4689999999999877766654 3468999999 999998875 21 26677777722 122
Q ss_pred --cceEEEecccccc-CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCC-C--------c-chhh-hhhhc----c
Q 018565 247 --EADAAIIKWVLHD-WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGV-D--------N-KFKS-VRLML----D 308 (354)
Q Consensus 247 --~~D~i~~~~~lh~-~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~-~--------~-~~~~-~~~~~----~ 308 (354)
.||+|+|..++|+ ++.++...+|++++++||| ||.+++..+........ . . +... ..... +
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lkp-GG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 205 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTAS-GGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADD 205 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEE-EEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETT
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccc
Confidence 5999999999997 4545567999999999999 99998876532110000 0 0 0000 00000 0
Q ss_pred H-Hhhcc---cCC--cccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 309 M-VMMAH---TNK--GKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 309 l-~~~~~---~~~--g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
. ..... +.. ....+.+++.++++++||++++....
T Consensus 206 ~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 206 RIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp EEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred ccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 0 00000 011 12457899999999999999988664
No 102
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.45 E-value=2.1e-12 Score=115.10 Aligned_cols=134 Identities=13% Similarity=0.154 Sum_probs=104.8
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCC--CcceEEEecc----
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGV--PEADAAIIKW---- 255 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~--~~~D~i~~~~---- 255 (354)
+..+|||+|||+|..+..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|++++. ..||+|+++.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYID 188 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCBC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCCC
Confidence 457999999999999999999999999999999 888887765 257999999999854 3599999973
Q ss_pred ---------ccccCCh----------HHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccC
Q 018565 256 ---------VLHDWGD----------DECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTN 316 (354)
Q Consensus 256 ---------~lh~~~~----------~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 316 (354)
++++.|. +...++++++.+.|+| ||.+++.. ..
T Consensus 189 ~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkp-gG~l~~~~------~~--------------------- 240 (276)
T 2b3t_A 189 EQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVS-GGFLLLEH------GW--------------------- 240 (276)
T ss_dssp TTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEE-EEEEEEEC------CS---------------------
T ss_pred ccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCC-CCEEEEEE------Cc---------------------
Confidence 3333331 3457899999999999 99888731 11
Q ss_pred CcccCCHHHHHHHHHHcCCceeEEEE-cCCceeEEEEeC
Q 018565 317 KGKERSLKEWDYVLRQAGFSRYNITS-IHAVQSLIEAFP 354 (354)
Q Consensus 317 ~g~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~~i~~~~ 354 (354)
.+.+++.++++++||+.++++. ..+...++.+++
T Consensus 241 ----~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 241 ----QQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp ----SCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred ----hHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 1367888999999999888765 455666776653
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.43 E-value=1.5e-12 Score=112.13 Aligned_cols=141 Identities=14% Similarity=0.125 Sum_probs=101.2
Q ss_pred cCCCceEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCCC--C----CcceEEEec
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKA-FPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFDG--V----PEADAAIIK 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~~--~----~~~D~i~~~ 254 (354)
+.++.+|||+|||+|.++..+++. .|.-+++++|+ +++++.+++ ..++..+.+|..++ . ..+|+|++.
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEe
Confidence 678999999999999999999986 58899999999 888877654 56899998888763 1 237888753
Q ss_pred cccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcC
Q 018565 255 WVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAG 334 (354)
Q Consensus 255 ~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aG 334 (354)
. ++. ++...+++++++.||| ||+++|+......+.. .+ . . ...++-.+.|+++|
T Consensus 155 ~--~~~--~~~~~~l~~~~r~LKp-GG~lvI~ik~r~~d~~-~p------------------~-~-~~~~~ev~~L~~~G 208 (233)
T 4df3_A 155 V--AQP--EQAAIVVRNARFFLRD-GGYMLMAIKARSIDVT-TE------------------P-S-EVYKREIKTLMDGG 208 (233)
T ss_dssp C--CCT--THHHHHHHHHHHHEEE-EEEEEEEEECCHHHHH-TC------------------C-C-HHHHHHHHHHHHTT
T ss_pred c--cCC--hhHHHHHHHHHHhccC-CCEEEEEEecccCCCC-CC------------------h-H-HHHHHHHHHHHHCC
Confidence 2 221 2446789999999999 9999987543222111 00 0 0 01233356788999
Q ss_pred CceeEEEEcCC---ceeEEEEe
Q 018565 335 FSRYNITSIHA---VQSLIEAF 353 (354)
Q Consensus 335 f~~~~~~~~~~---~~~~i~~~ 353 (354)
|+..+...+.. .+.++.++
T Consensus 209 F~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 209 LEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp CCEEEEEECTTTSTTEEEEEEC
T ss_pred CEEEEEEccCCCCCceEEEEEE
Confidence 99999888743 46666654
No 104
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.43 E-value=3.1e-13 Score=119.86 Aligned_cols=96 Identities=18% Similarity=0.177 Sum_probs=81.0
Q ss_pred CCceEEEecCCccH----HHHHHHHHCC----CCeEEEeec-hHHhhhcccC----------------------------
Q 018565 189 GIETLVDIGGNDGT----TLRTLTKAFP----RIRGINFDL-PHVVCVAEKC---------------------------- 231 (354)
Q Consensus 189 ~~~~vLDvG~G~G~----~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~---------------------------- 231 (354)
+..+|+|+|||+|. ++..+++..| +.+++++|+ +.+++.|++.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 5555666645 468999999 8998887641
Q ss_pred ---------CCeEEeecCCCC-CCC---cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEE
Q 018565 232 ---------HGVEHVGGDMFD-GVP---EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 232 ---------~~v~~~~~d~~~-~~~---~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
.+|+|..+|+.+ +++ +||+|+|.+++++++++...+++++++++|+| ||.|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~p-gG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKP-DGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEE-EEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCC-CcEEEE
Confidence 268999999998 454 59999999999999998889999999999999 998887
No 105
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.43 E-value=2.3e-12 Score=108.07 Aligned_cols=141 Identities=15% Similarity=0.259 Sum_probs=106.7
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CC--CeEEeecCCCCCCC-
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CH--GVEHVGGDMFDGVP- 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~--~v~~~~~d~~~~~~- 246 (354)
..+++.+. ..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ .. ++++..+|+.++.+
T Consensus 42 ~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (194)
T 1dus_A 42 KILVENVV--VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKD 117 (194)
T ss_dssp HHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTT
T ss_pred HHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccccc
Confidence 34455555 557789999999999999999887 779999999 888887764 23 49999999988533
Q ss_pred -cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHH
Q 018565 247 -EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKE 325 (354)
Q Consensus 247 -~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e 325 (354)
.||+|++..++|+ ..+....+++++.++|+| ||.+++...... ...+
T Consensus 118 ~~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~-gG~l~~~~~~~~------------------------------~~~~ 165 (194)
T 1dus_A 118 RKYNKIITNPPIRA-GKEVLHRIIEEGKELLKD-NGEIWVVIQTKQ------------------------------GAKS 165 (194)
T ss_dssp SCEEEEEECCCSTT-CHHHHHHHHHHHHHHEEE-EEEEEEEEESTH------------------------------HHHH
T ss_pred CCceEEEECCCccc-chhHHHHHHHHHHHHcCC-CCEEEEEECCCC------------------------------ChHH
Confidence 5999999888774 455677999999999999 999998764210 0234
Q ss_pred HHHHHHHcCCceeEEEEcCCceeEEEEeC
Q 018565 326 WDYVLRQAGFSRYNITSIHAVQSLIEAFP 354 (354)
Q Consensus 326 ~~~ll~~aGf~~~~~~~~~~~~~~i~~~~ 354 (354)
+.+.+++. |..++++.....+.++.++|
T Consensus 166 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 166 LAKYMKDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp HHHHHHHH-HSCCEEEEEETTEEEEEEEC
T ss_pred HHHHHHHH-hcceEEEecCCcEEEEEEee
Confidence 66667776 66677777766677776654
No 106
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.43 E-value=1.8e-12 Score=110.79 Aligned_cols=137 Identities=15% Similarity=0.128 Sum_probs=95.9
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHh----hhcccCCCeEEeecCCCCC-----CC-cceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVV----CVAEKCHGVEHVGGDMFDG-----VP-EADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~----~~a~~~~~v~~~~~d~~~~-----~~-~~D~i~~~~ 255 (354)
..++.+|||+|||+|.++..+++..+..+++++|+ +.++ +.++...++.++.+|...+ ++ .||+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~- 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD- 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe-
Confidence 45778999999999999999999887779999999 6544 4444456889988888762 22 49999986
Q ss_pred ccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHH----HHHHH
Q 018565 256 VLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEW----DYVLR 331 (354)
Q Consensus 256 ~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~----~~ll~ 331 (354)
+.+ .++...++++++++||| ||++++.-...+.+.. .+.+++ .+.++
T Consensus 134 ~~~---~~~~~~~l~~~~r~Lkp-gG~l~i~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~ 184 (210)
T 1nt2_A 134 IAQ---KNQIEILKANAEFFLKE-KGEVVIMVKARSIDST-------------------------AEPEEVFKSVLKEME 184 (210)
T ss_dssp CCS---TTHHHHHHHHHHHHEEE-EEEEEEEEEHHHHCTT-------------------------SCHHHHHHHHHHHHH
T ss_pred ccC---hhHHHHHHHHHHHHhCC-CCEEEEEEecCCcccc-------------------------CCHHHHHHHHHHHHH
Confidence 322 23445669999999999 9999987322111000 012222 12378
Q ss_pred HcCCceeEEEEcC---CceeEEEEeC
Q 018565 332 QAGFSRYNITSIH---AVQSLIEAFP 354 (354)
Q Consensus 332 ~aGf~~~~~~~~~---~~~~~i~~~~ 354 (354)
++ |++.+..... ..+.++.++|
T Consensus 185 ~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 185 GD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp TT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred hh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 88 9999998872 2566777664
No 107
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.41 E-value=7e-13 Score=115.19 Aligned_cols=141 Identities=12% Similarity=0.071 Sum_probs=97.1
Q ss_pred cCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhh----hcccCCCeEEeecCCCCC--C----CcceEEEec
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVC----VAEKCHGVEHVGGDMFDG--V----PEADAAIIK 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~----~a~~~~~v~~~~~d~~~~--~----~~~D~i~~~ 254 (354)
+.+..+|||+|||+|.++..+++.+ |..+++++|+ +.+++ .++...+++++.+|+.++ . ..||+|++.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 5677899999999999999999986 7789999999 65443 344358899999999872 1 249999985
Q ss_pred cccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcC
Q 018565 255 WVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAG 334 (354)
Q Consensus 255 ~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aG 334 (354)
.. ..+....+++++.++||| ||.+++.-........ . ... ..+ ..+ .++|+++|
T Consensus 155 ~~----~~~~~~~~~~~~~~~Lkp-gG~l~i~~~~~~~~~~-~----------~~~--------~~~-~~~-~~~l~~~G 208 (233)
T 2ipx_A 155 VA----QPDQTRIVALNAHTFLRN-GGHFVISIKANCIDST-A----------SAE--------AVF-ASE-VKKMQQEN 208 (233)
T ss_dssp CC----CTTHHHHHHHHHHHHEEE-EEEEEEEEEHHHHCSS-S----------CHH--------HHH-HHH-HHTTGGGT
T ss_pred CC----CccHHHHHHHHHHHHcCC-CeEEEEEEcccccccC-C----------CHH--------HHH-HHH-HHHHHHCC
Confidence 43 233456778999999999 9999883221100111 0 000 001 123 58899999
Q ss_pred CceeEEEEcCC---ceeEEEEe
Q 018565 335 FSRYNITSIHA---VQSLIEAF 353 (354)
Q Consensus 335 f~~~~~~~~~~---~~~~i~~~ 353 (354)
|+++++.++.. .+.++.++
T Consensus 209 f~~~~~~~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 209 MKPQEQLTLEPYERDHAVVVGV 230 (233)
T ss_dssp EEEEEEEECTTTSSSEEEEEEE
T ss_pred CceEEEEecCCccCCcEEEEEE
Confidence 99999777643 35555543
No 108
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.41 E-value=1.2e-12 Score=119.01 Aligned_cols=154 Identities=15% Similarity=0.074 Sum_probs=104.7
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------------CCCeEEeecCCCC-C----C--C
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------------CHGVEHVGGDMFD-G----V--P 246 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------------~~~v~~~~~d~~~-~----~--~ 246 (354)
.+..+|||||||+|.++..+++ .+..+++++|+ +.+++.+++ ..+++++.+|+.+ + + +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 3568999999999999999887 46779999999 888887764 1378999999987 3 3 2
Q ss_pred --cceEEEeccccccC--ChHHHHHHHHHHHHhcCCCCceEEEEeeeeCC-------C-CCC-Ccc-----hhhh-----
Q 018565 247 --EADAAIIKWVLHDW--GDDECIKILKNCKEAITKDKGKVIIVEAIIEE-------D-DGV-DNK-----FKSV----- 303 (354)
Q Consensus 247 --~~D~i~~~~~lh~~--~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~-------~-~~~-~~~-----~~~~----- 303 (354)
.||+|++..++|+. +.++...+|++++++||| ||.+++..+.... . ... ..+ +...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp-gG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 190 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSP-GGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPL 190 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEE-EEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCS
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCC-CcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCC
Confidence 59999999999986 445678999999999999 9999987653210 0 000 000 0000
Q ss_pred -hhhccHHh-hcccCCcccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 304 -RLMLDMVM-MAHTNKGKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 304 -~~~~~l~~-~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
.....+.. ..........+.+++.+++++.||++++....
T Consensus 191 ~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 191 FGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp SCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred ccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCH
Confidence 00000000 00000112357899999999999999988764
No 109
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.40 E-value=1.6e-12 Score=114.19 Aligned_cols=107 Identities=11% Similarity=-0.017 Sum_probs=82.9
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--C-CCeEEeecCCCC----C-CC
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--C-HGVEHVGGDMFD----G-VP 246 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~-~~v~~~~~d~~~----~-~~ 246 (354)
...++..+. ..+..+|||||||+|.++..++++ +.+++++|+ +.+++.+++ . ..+.....++.. . ..
T Consensus 34 ~~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~ 109 (261)
T 3iv6_A 34 RENDIFLEN--IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAG 109 (261)
T ss_dssp HHHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTT
T ss_pred HHHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCC
Confidence 345566666 677889999999999999999987 568999999 899998875 1 122222222211 1 23
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
+||+|++..++|+++.++...++++++++| | ||++++...
T Consensus 110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-P-GG~l~lS~~ 149 (261)
T 3iv6_A 110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-G-SGTVRASVK 149 (261)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-T-TSEEEEEEE
T ss_pred CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-c-CcEEEEEec
Confidence 599999999999999888899999999999 9 999998753
No 110
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.39 E-value=2.7e-13 Score=115.79 Aligned_cols=135 Identities=12% Similarity=0.065 Sum_probs=89.2
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCCCC-------CcceEEEec
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFDGV-------PEADAAIIK 254 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~-------~~~D~i~~~ 254 (354)
.+..+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+++ ..||+|++.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 5678999999999999999999999999999999 888888875 126888999988732 459999996
Q ss_pred ccccc------CChHHH------------------HHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHH
Q 018565 255 WVLHD------WGDDEC------------------IKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMV 310 (354)
Q Consensus 255 ~~lh~------~~~~~~------------------~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~ 310 (354)
...+. ++.+.. ..++++++++||| ||.+++++.. .
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~-----~--------------- 167 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR-GRAGVFLEVG-----H--------------- 167 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCS-SSEEEEEECT-----T---------------
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC-CCeEEEEEEC-----C---------------
Confidence 54433 222211 6889999999999 9996665431 1
Q ss_pred hhcccCCcccCCHHHHHHHHH--HcCCceeEEEEcC-CceeEEEEe
Q 018565 311 MMAHTNKGKERSLKEWDYVLR--QAGFSRYNITSIH-AVQSLIEAF 353 (354)
Q Consensus 311 ~~~~~~~g~~~t~~e~~~ll~--~aGf~~~~~~~~~-~~~~~i~~~ 353 (354)
...+++.++++ +.||..+++++.. +...++.++
T Consensus 168 ----------~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~ 203 (215)
T 4dzr_A 168 ----------NQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVT 203 (215)
T ss_dssp ----------SCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEE
T ss_pred ----------ccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEE
Confidence 12556777888 8899888877753 344555443
No 111
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=2.6e-13 Score=118.20 Aligned_cols=100 Identities=12% Similarity=0.082 Sum_probs=78.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC---CCC--cceEEEe-cc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD---GVP--EADAAII-KW 255 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~---~~~--~~D~i~~-~~ 255 (354)
.+..+|||||||+|..+..+++..+ .+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++ .+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 3568999999999999999966433 48999999 888888765 4679999999865 344 4999998 55
Q ss_pred c--cccCChHHHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 256 V--LHDWGDDECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 256 ~--lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
. .+.+.......++++++++||| ||++++++..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~Lkp-gG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKP-GGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEE-EEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCC-CeEEEEEecC
Confidence 4 3344444556889999999999 9999987654
No 112
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.38 E-value=1.2e-12 Score=108.37 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=78.7
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCC--C--CcceEEEec
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDG--V--PEADAAIIK 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~--~--~~~D~i~~~ 254 (354)
..+..+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++ ..++ ++.+|..+. . +.||+|++.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 55678999999999999999999999999999999 888887764 2378 888888663 2 459999999
Q ss_pred cccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 255 WVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 255 ~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
..+|+ ..+++++.+.|+| ||++++.+.
T Consensus 102 ~~~~~------~~~l~~~~~~L~~-gG~l~~~~~ 128 (178)
T 3hm2_A 102 GGLTA------PGVFAAAWKRLPV-GGRLVANAV 128 (178)
T ss_dssp C-TTC------TTHHHHHHHTCCT-TCEEEEEEC
T ss_pred CcccH------HHHHHHHHHhcCC-CCEEEEEee
Confidence 99986 4789999999999 999988653
No 113
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.38 E-value=1.2e-12 Score=129.32 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=85.8
Q ss_pred CCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhccc------------CCCeEEeecCCCC-CCC--cceE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEK------------CHGVEHVGGDMFD-GVP--EADA 250 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~~~--~~D~ 250 (354)
.++.+|||||||+|.++..+++.. |..+++++|+ +.+++.|++ ..+++++.+|+.+ +.+ .||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 467899999999999999999987 5679999999 888888754 2579999999988 543 5999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 251 AIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 251 i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
|++..++||++++....++++++++||| | .++|..+
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKP-G-~LIISTP 835 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHP-K-LLIVSTP 835 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCC-S-EEEEEEC
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCC-C-EEEEEec
Confidence 9999999999999888999999999999 7 6666554
No 114
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.38 E-value=8.6e-13 Score=112.69 Aligned_cols=100 Identities=13% Similarity=0.095 Sum_probs=84.5
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CCC--cceEEEecccccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GVP--EADAAIIKWVLHD 259 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~ 259 (354)
.+..+|||+|||+|.++..+++..+. +++++|+ +.+++.+++ ..++++..+|+.+ +++ .||+|++..++|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 46789999999999999999998654 8999999 888887765 3689999999988 554 4999999988876
Q ss_pred CC-------------hHHHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 260 WG-------------DDECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 260 ~~-------------~~~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
+. .+...++|+++.++||| ||.+++.+..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~li~~~~~ 161 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVP-GGRFISMTSA 161 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEE-EEEEEEEESC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcC-CCEEEEEeCC
Confidence 54 44668999999999999 9999998754
No 115
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.37 E-value=1.2e-11 Score=106.73 Aligned_cols=141 Identities=11% Similarity=0.082 Sum_probs=99.0
Q ss_pred cCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhcc----cCCCeEEeecCCCCC-----CC-cceEEEec
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAE----KCHGVEHVGGDMFDG-----VP-EADAAIIK 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~----~~~~v~~~~~d~~~~-----~~-~~D~i~~~ 254 (354)
..+..+|||+|||+|.++..+++.. |..+++++|. +.+++.+. ...++++..+|+.++ .+ .||+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 4567899999999999999999874 6689999999 76655543 247899999999872 22 49999975
Q ss_pred cccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcC
Q 018565 255 WVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAG 334 (354)
Q Consensus 255 ~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aG 334 (354)
.. ..+....++++++++||| ||.+++. ........ .. .......+++..+ .++
T Consensus 151 ~~----~~~~~~~~l~~~~~~Lkp-gG~l~~~-~~~~~~~~-~~------------------~~~~~~~~~l~~l-~~~- 203 (227)
T 1g8a_A 151 VA----QPTQAKILIDNAEVYLKR-GGYGMIA-VKSRSIDV-TK------------------EPEQVFREVEREL-SEY- 203 (227)
T ss_dssp CC----STTHHHHHHHHHHHHEEE-EEEEEEE-EEGGGTCT-TS------------------CHHHHHHHHHHHH-HTT-
T ss_pred CC----CHhHHHHHHHHHHHhcCC-CCEEEEE-EecCCCCC-CC------------------ChhhhhHHHHHHH-Hhh-
Confidence 43 223344569999999999 9999988 22211111 10 0011235677777 777
Q ss_pred CceeEEEEcCCc---eeEEEEeC
Q 018565 335 FSRYNITSIHAV---QSLIEAFP 354 (354)
Q Consensus 335 f~~~~~~~~~~~---~~~i~~~~ 354 (354)
|+.++...+... +.++.+++
T Consensus 204 f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 204 FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp SEEEEEEECTTTSSSEEEEEEEC
T ss_pred ceeeeEeccCcccCCCEEEEEEe
Confidence 999998887544 66666654
No 116
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.36 E-value=6.5e-12 Score=103.57 Aligned_cols=95 Identities=8% Similarity=-0.036 Sum_probs=75.9
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----C--CCeEEeecCCCC-CCC-cceEEEecccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----C--HGVEHVGGDMFD-GVP-EADAAIIKWVL 257 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~--~~v~~~~~d~~~-~~~-~~D~i~~~~~l 257 (354)
.+..+|||+|||+|.++..++...|+.+++++|+ +.+++.+++ . .++++ .|..+ +.+ +||+|++.+++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKML 125 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETCH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhHH
Confidence 4678999999999999999999999999999999 999998875 2 24555 66665 333 49999999999
Q ss_pred ccCChHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 258 HDWGDDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
|++ ++ ....+.++.+.|+| ||.++-.+
T Consensus 126 HlL-~~-~~~al~~v~~~L~p-ggvfISfp 152 (200)
T 3fzg_A 126 PVL-KQ-QDVNILDFLQLFHT-QNFVISFP 152 (200)
T ss_dssp HHH-HH-TTCCHHHHHHTCEE-EEEEEEEE
T ss_pred Hhh-hh-hHHHHHHHHHHhCC-CCEEEEeC
Confidence 998 33 34566699999999 66554444
No 117
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.35 E-value=6.2e-12 Score=105.01 Aligned_cols=133 Identities=14% Similarity=0.140 Sum_probs=91.8
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-C-C-C-cceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-G-V-P-EADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~-~-~-~~D~i~~~~ 255 (354)
..++.+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+.. + . + +||+|++..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 346789999999999999999987 789999999 889888875 2789999877665 1 2 3 499998762
Q ss_pred -ccccC------ChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHH
Q 018565 256 -VLHDW------GDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDY 328 (354)
Q Consensus 256 -~lh~~------~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ 328 (354)
.++.- ..+....+++++.+.||| ||+++++.....+... . ......+|.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~~~~~~~~-~---------------------~~~~~~~~~~ 154 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEV-GGRLAIMIYYGHDGGD-M---------------------EKDAVLEYVI 154 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEE-EEEEEEEEC------C-H---------------------HHHHHHHHHH
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCC-CcEEEEEEeCCCCCCH-H---------------------HHHHHHHHHH
Confidence 22210 224567889999999999 9999987643222111 0 0012445556
Q ss_pred HHHHcCCceeEEEEcC
Q 018565 329 VLRQAGFSRYNITSIH 344 (354)
Q Consensus 329 ll~~aGf~~~~~~~~~ 344 (354)
.+...+|.+.+.....
T Consensus 155 ~l~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 155 GLDQRVFTAMLYQPLN 170 (185)
T ss_dssp HSCTTTEEEEEEEESS
T ss_pred hCCCceEEEEEehhhc
Confidence 6666788888776663
No 118
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.35 E-value=3.6e-12 Score=113.21 Aligned_cols=95 Identities=19% Similarity=0.215 Sum_probs=79.9
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CCCcceEEEeccccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GVPEADAAIIKWVLH 258 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~~~D~i~~~~~lh 258 (354)
..++.+|||||||+|.++..++.+.++.+++++|+ +++++.|++ .++++++.+|..+ +..+||+|++....
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~~- 198 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAALA- 198 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTTC-
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCCc-
Confidence 67889999999999988776667778999999999 999998875 3789999999988 54469999986542
Q ss_pred cCChHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 259 DWGDDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 259 ~~~~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
+ +..++++++++.||| ||+|++.+
T Consensus 199 --~--d~~~~l~el~r~LkP-GG~Lvv~~ 222 (298)
T 3fpf_A 199 --E--PKRRVFRNIHRYVDT-ETRIIYRT 222 (298)
T ss_dssp --S--CHHHHHHHHHHHCCT-TCEEEEEE
T ss_pred --c--CHHHHHHHHHHHcCC-CcEEEEEc
Confidence 2 345899999999999 99999866
No 119
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.34 E-value=4.9e-12 Score=114.32 Aligned_cols=129 Identities=16% Similarity=0.096 Sum_probs=95.1
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCC-C----CCcceEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFD-G----VPEADAA 251 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~-~----~~~~D~i 251 (354)
.++.+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|..+ . ...||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3568999999999999999998777889999999 888877654 3689999999876 2 2249999
Q ss_pred EeccccccCChHHH--HHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHH
Q 018565 252 IIKWVLHDWGDDEC--IKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYV 329 (354)
Q Consensus 252 ~~~~~lh~~~~~~~--~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~l 329 (354)
++....+..+.... .+++++++++||| ||.+++.... .. . ......++.+.
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~~~~----~~-----------~-----------~~~~~~~~~~~ 226 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKP-DGICCNQGES----IW-----------L-----------DLELIEKMSRF 226 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEE-EEEEEEEECC----TT-----------T-----------CHHHHHHHHHH
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCC-CcEEEEecCC----cc-----------c-----------chHHHHHHHHH
Confidence 99777665544332 5899999999999 9998876311 01 0 01136788899
Q ss_pred HHHcCCceeEEEEc
Q 018565 330 LRQAGFSRYNITSI 343 (354)
Q Consensus 330 l~~aGf~~~~~~~~ 343 (354)
++++||..+++...
T Consensus 227 l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 227 IRETGFASVQYALM 240 (304)
T ss_dssp HHHHTCSEEEEEEC
T ss_pred HHhCCCCcEEEEEe
Confidence 99999998887654
No 120
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.34 E-value=2.5e-13 Score=119.61 Aligned_cols=144 Identities=16% Similarity=0.085 Sum_probs=96.1
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCC----CCCC-----cceEE
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMF----DGVP-----EADAA 251 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~----~~~~-----~~D~i 251 (354)
+..+|||+|||+|.++..+++++|+.+++++|+ +.+++.+++ .++++++.+|.. ++++ .||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 567999999999999999999888899999999 888888765 346999999853 3333 49999
Q ss_pred EeccccccCCh-------------HHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCc
Q 018565 252 IIKWVLHDWGD-------------DECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKG 318 (354)
Q Consensus 252 ~~~~~lh~~~~-------------~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 318 (354)
+++-..|.... +....++.+++++||| ||.+.+++........ .......... ..+
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkp-gG~l~~~~~~~~~~~~---------~l~~~g~~~~-~~~ 213 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAE-GGELEFVKRIIHDSLQ---------LKKRLRWYSC-MLG 213 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHH-HTHHHHHHHHHHHHHH---------HGGGBSCEEE-EES
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEec-CCEEEEEHHHHHHHHh---------cccceEEEEE-CCC
Confidence 99866664331 1123567889999999 9998887643321000 0000000011 123
Q ss_pred ccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 319 KERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 319 ~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
...+.+++.++++++||+.+++..+
T Consensus 214 ~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 214 KKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp STTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred ChhHHHHHHHHHHHcCCCceEEEEE
Confidence 3445688999999999999888776
No 121
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.34 E-value=7.4e-12 Score=110.21 Aligned_cols=127 Identities=13% Similarity=0.127 Sum_probs=98.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCCCC--CcceEEEecccccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFDGV--PEADAAIIKWVLHD 259 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~--~~~D~i~~~~~lh~ 259 (354)
.+..+|||+|||+|.++..+++..+ +++++|+ +.+++.+++ ...+++..+|+.+++ .+||+|+++...|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~- 195 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE- 195 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH-
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH-
Confidence 3568999999999999999888755 9999999 888887764 112899999987743 3599999865443
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeE
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYN 339 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 339 (354)
....+++++.+.|+| ||++++.+... .+.+++.++++++||++++
T Consensus 196 ----~~~~~l~~~~~~Lkp-gG~lils~~~~------------------------------~~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 196 ----LHAALAPRYREALVP-GGRALLTGILK------------------------------DRAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp ----HHHHHHHHHHHHEEE-EEEEEEEEEEG------------------------------GGHHHHHHHHHHTTCEEEE
T ss_pred ----HHHHHHHHHHHHcCC-CCEEEEEeecc------------------------------CCHHHHHHHHHHCCCEEEE
Confidence 356899999999999 99999865421 0267888999999999999
Q ss_pred EEEcCCceeEEEEe
Q 018565 340 ITSIHAVQSLIEAF 353 (354)
Q Consensus 340 ~~~~~~~~~~i~~~ 353 (354)
+.......+ +.++
T Consensus 241 ~~~~~~W~~-l~~~ 253 (254)
T 2nxc_A 241 EAAEGEWVL-LAYG 253 (254)
T ss_dssp EEEETTEEE-EEEE
T ss_pred EeccCCeEE-EEEE
Confidence 877665444 3444
No 122
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.34 E-value=5.3e-12 Score=111.06 Aligned_cols=127 Identities=14% Similarity=0.204 Sum_probs=98.7
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCCC-
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKA-FPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGVP- 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~~- 246 (354)
..++..++ ..++.+|||+|||+|.++..+++. .|..+++++|+ +++++.+++ .+++++..+|+.+.++
T Consensus 83 ~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (255)
T 3mb5_A 83 ALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE 160 (255)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC
T ss_pred HHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC
Confidence 34555555 667889999999999999999998 88999999999 888888765 3569999999998654
Q ss_pred -cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHH
Q 018565 247 -EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKE 325 (354)
Q Consensus 247 -~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e 325 (354)
.||+|++. .++. ..+++++.++|+| ||.+++...... ..++
T Consensus 161 ~~~D~v~~~-----~~~~--~~~l~~~~~~L~~-gG~l~~~~~~~~------------------------------~~~~ 202 (255)
T 3mb5_A 161 ENVDHVILD-----LPQP--ERVVEHAAKALKP-GGFFVAYTPCSN------------------------------QVMR 202 (255)
T ss_dssp CSEEEEEEC-----SSCG--GGGHHHHHHHEEE-EEEEEEEESSHH------------------------------HHHH
T ss_pred CCcCEEEEC-----CCCH--HHHHHHHHHHcCC-CCEEEEEECCHH------------------------------HHHH
Confidence 49999872 3333 3689999999999 999988653210 1456
Q ss_pred HHHHHHHcC--CceeEEEEc
Q 018565 326 WDYVLRQAG--FSRYNITSI 343 (354)
Q Consensus 326 ~~~ll~~aG--f~~~~~~~~ 343 (354)
+.+++++.| |..++++..
T Consensus 203 ~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 203 LHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp HHHHHHHTGGGBSCCEEECC
T ss_pred HHHHHHHcCCCccccEEEEE
Confidence 677888888 888776543
No 123
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.33 E-value=4.9e-12 Score=117.49 Aligned_cols=108 Identities=19% Similarity=0.296 Sum_probs=87.1
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----C----CCeEEeecCCCCCCC
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----C----HGVEHVGGDMFDGVP 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~----~~v~~~~~d~~~~~~ 246 (354)
..+++.++ .....+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++ . .++++..+|+.++++
T Consensus 212 ~~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~ 289 (375)
T 4dcm_A 212 RFFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 289 (375)
T ss_dssp HHHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC
T ss_pred HHHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC
Confidence 34566666 44558999999999999999999999999999999 888887765 1 258889999999655
Q ss_pred --cceEEEecccccc---CChHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 247 --EADAAIIKWVLHD---WGDDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 247 --~~D~i~~~~~lh~---~~~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
.||+|+++..+|+ .++....++++++.+.||| ||.++++.
T Consensus 290 ~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~iv~ 334 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI-NGELYIVA 334 (375)
T ss_dssp TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEE-EEEEEEEE
T ss_pred CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCC-CcEEEEEE
Confidence 4999999988885 3344556899999999999 99999964
No 124
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.33 E-value=3.6e-11 Score=103.77 Aligned_cols=141 Identities=17% Similarity=0.163 Sum_probs=95.8
Q ss_pred cCCCceEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHh----hhcccCCCeEEeecCCCCC------CCcceEEEec
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKA-FPRIRGINFDL-PHVV----CVAEKCHGVEHVGGDMFDG------VPEADAAIIK 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~----~~a~~~~~v~~~~~d~~~~------~~~~D~i~~~ 254 (354)
+.++.+|||+|||+|.++..+++. .|..+++++|+ +.++ +.++...++.++.+|...+ .+.||+|++.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEec
Confidence 567899999999999999999886 46789999999 7654 3344457899999998763 1359999886
Q ss_pred cccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcC
Q 018565 255 WVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAG 334 (354)
Q Consensus 255 ~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aG 334 (354)
... + ++...+++.+++.||| ||++++.......+.. ..... ..++....|+++|
T Consensus 154 ~a~---~-~~~~il~~~~~~~Lkp-GG~lvisik~~~~d~t--------------------~~~~e-~~~~~~~~L~~~g 207 (232)
T 3id6_C 154 IAQ---P-DQTDIAIYNAKFFLKV-NGDMLLVIKARSIDVT--------------------KDPKE-IYKTEVEKLENSN 207 (232)
T ss_dssp CCC---T-THHHHHHHHHHHHEEE-EEEEEEEEC---------------------------CCSSS-STTHHHHHHHHTT
T ss_pred CCC---h-hHHHHHHHHHHHhCCC-CeEEEEEEccCCcccC--------------------CCHHH-HHHHHHHHHHHCC
Confidence 443 2 2333455667779999 9999987322111111 00011 1123445678899
Q ss_pred CceeEEEEcCC---ceeEEEEe
Q 018565 335 FSRYNITSIHA---VQSLIEAF 353 (354)
Q Consensus 335 f~~~~~~~~~~---~~~~i~~~ 353 (354)
|++.+...+.. .+.++.++
T Consensus 208 f~~~~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 208 FETIQIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp EEEEEEEECTTTCSSCEEEEEE
T ss_pred CEEEEEeccCCCcCceEEEEEE
Confidence 99999988832 47777665
No 125
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.32 E-value=3e-11 Score=103.42 Aligned_cols=129 Identities=11% Similarity=0.046 Sum_probs=102.6
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCCC---cceEEEeccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGVP---EADAAIIKWV 256 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~~---~~D~i~~~~~ 256 (354)
+++.+|+|||||+|..+..+++..|..+++++|+ +.+++.|++ .++|++..+|.+++++ +||+|++..+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 3568999999999999999999999889999999 888888775 4689999999998654 4999988765
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCc
Q 018565 257 LHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFS 336 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~ 336 (354)
- .+....+|....+.|+| +|++++.-. . ..+...++|.+.||.
T Consensus 94 G----g~~i~~Il~~~~~~L~~-~~~lVlq~~------~--------------------------~~~~vr~~L~~~Gf~ 136 (225)
T 3kr9_A 94 G----GRLIARILEEGLGKLAN-VERLILQPN------N--------------------------REDDLRIWLQDHGFQ 136 (225)
T ss_dssp C----HHHHHHHHHHTGGGCTT-CCEEEEEES------S--------------------------CHHHHHHHHHHTTEE
T ss_pred C----hHHHHHHHHHHHHHhCC-CCEEEEECC------C--------------------------CHHHHHHHHHHCCCE
Confidence 2 34577999999999999 988776221 0 256778889999999
Q ss_pred eeEEEEc---CCceeEEEEe
Q 018565 337 RYNITSI---HAVQSLIEAF 353 (354)
Q Consensus 337 ~~~~~~~---~~~~~~i~~~ 353 (354)
+++..-+ +.++.+|.+.
T Consensus 137 i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 137 IVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEECCEEEEEEEEE
Confidence 9986543 3456676654
No 126
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.32 E-value=4.6e-12 Score=110.57 Aligned_cols=122 Identities=18% Similarity=0.245 Sum_probs=94.6
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CC-----CcceEEEe
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GV-----PEADAAII 253 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~-----~~~D~i~~ 253 (354)
+.+..+|||||||+|..+..++...|+.+++++|+ +.+++.+++ ..+++++.+|+.+ +. ..||+|++
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 34678999999999999999999889999999999 888887764 3479999999876 42 24999998
Q ss_pred ccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHc
Q 018565 254 KWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQA 333 (354)
Q Consensus 254 ~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~a 333 (354)
..+ . ....+++.+.++|+| ||.+++.... .. . ...+++.+.+++.
T Consensus 148 ~~~----~--~~~~~l~~~~~~Lkp-gG~l~~~~g~----~~-~-----------------------~~~~~~~~~l~~~ 192 (240)
T 1xdz_A 148 RAV----A--RLSVLSELCLPLVKK-NGLFVALKAA----SA-E-----------------------EELNAGKKAITTL 192 (240)
T ss_dssp ECC----S--CHHHHHHHHGGGEEE-EEEEEEEECC-----C-H-----------------------HHHHHHHHHHHHT
T ss_pred ecc----C--CHHHHHHHHHHhcCC-CCEEEEEeCC----Cc-h-----------------------HHHHHHHHHHHHc
Confidence 763 2 246899999999999 9999875311 00 0 0135677889999
Q ss_pred CCceeEEEEc
Q 018565 334 GFSRYNITSI 343 (354)
Q Consensus 334 Gf~~~~~~~~ 343 (354)
||+..++.+.
T Consensus 193 g~~~~~~~~~ 202 (240)
T 1xdz_A 193 GGELENIHSF 202 (240)
T ss_dssp TEEEEEEEEE
T ss_pred CCeEeEEEEE
Confidence 9998887653
No 127
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.32 E-value=2.2e-12 Score=118.64 Aligned_cols=109 Identities=17% Similarity=0.217 Sum_probs=88.9
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCCCC-Ccce
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFDGV-PEAD 249 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~-~~~D 249 (354)
+.+++.++ .....+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++ ...+++..+|+++.. +.||
T Consensus 186 ~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD 263 (343)
T 2pjd_A 186 QLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFD 263 (343)
T ss_dssp HHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEE
T ss_pred HHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCee
Confidence 44555564 33457999999999999999999999999999999 888887764 344778899998743 3599
Q ss_pred EEEecccccc---CChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 250 AAIIKWVLHD---WGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 250 ~i~~~~~lh~---~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
+|+++.++|+ ++.+...+++++++++||| ||.++++..
T Consensus 264 ~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkp-gG~l~i~~~ 304 (343)
T 2pjd_A 264 MIISNPPFHDGMQTSLDAAQTLIRGAVRHLNS-GGELRIVAN 304 (343)
T ss_dssp EEEECCCCCSSSHHHHHHHHHHHHHHGGGEEE-EEEEEEEEE
T ss_pred EEEECCCcccCccCCHHHHHHHHHHHHHhCCC-CcEEEEEEc
Confidence 9999999986 2455678999999999999 999999764
No 128
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.32 E-value=2e-11 Score=103.73 Aligned_cols=115 Identities=17% Similarity=0.108 Sum_probs=90.4
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CC-CeEEeecCCCCC---CCcceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CH-GVEHVGGDMFDG---VPEADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~~---~~~~D~i~~~~ 255 (354)
..+..+|||+|||+|.++..+++. +.+++++|+ +++++.+++ .+ +++++.+|+.+. .+.||+|++..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 556789999999999999999987 789999999 888888765 23 899999999882 34699999876
Q ss_pred ccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCC
Q 018565 256 VLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGF 335 (354)
Q Consensus 256 ~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf 335 (354)
.+ ... +++++.++||| ||++++..... .+..++.+++++.||
T Consensus 131 ~~------~~~-~l~~~~~~Lkp-gG~lv~~~~~~------------------------------~~~~~~~~~l~~~g~ 172 (204)
T 3njr_A 131 GG------SQA-LYDRLWEWLAP-GTRIVANAVTL------------------------------ESETLLTQLHARHGG 172 (204)
T ss_dssp CC------CHH-HHHHHHHHSCT-TCEEEEEECSH------------------------------HHHHHHHHHHHHHCS
T ss_pred cc------cHH-HHHHHHHhcCC-CcEEEEEecCc------------------------------ccHHHHHHHHHhCCC
Confidence 44 123 89999999999 99998754311 025566778888898
Q ss_pred ceeEEE
Q 018565 336 SRYNIT 341 (354)
Q Consensus 336 ~~~~~~ 341 (354)
++.++.
T Consensus 173 ~i~~i~ 178 (204)
T 3njr_A 173 QLLRID 178 (204)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 877753
No 129
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.32 E-value=5.3e-12 Score=112.48 Aligned_cols=125 Identities=14% Similarity=0.083 Sum_probs=94.1
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHhhhccc----C---CCeEEeecCCCCCCC--
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKA-FPRIRGINFDL-PHVVCVAEK----C---HGVEHVGGDMFDGVP-- 246 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~----~---~~v~~~~~d~~~~~~-- 246 (354)
.++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++ . +++++..+|+.++++
T Consensus 101 ~~~~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 178 (275)
T 1yb2_A 101 YIIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQ 178 (275)
T ss_dssp -----CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSC
T ss_pred HHHHHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCC
Confidence 4444455 667789999999999999999997 78899999999 888887764 2 579999999988554
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHH
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEW 326 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~ 326 (354)
.||+|++ ++++. .++|+++.++||| ||.+++...... ..+++
T Consensus 179 ~fD~Vi~-----~~~~~--~~~l~~~~~~Lkp-gG~l~i~~~~~~------------------------------~~~~~ 220 (275)
T 1yb2_A 179 MYDAVIA-----DIPDP--WNHVQKIASMMKP-GSVATFYLPNFD------------------------------QSEKT 220 (275)
T ss_dssp CEEEEEE-----CCSCG--GGSHHHHHHTEEE-EEEEEEEESSHH------------------------------HHHHH
T ss_pred CccEEEE-----cCcCH--HHHHHHHHHHcCC-CCEEEEEeCCHH------------------------------HHHHH
Confidence 4999998 33433 3789999999999 999998663110 13455
Q ss_pred HHHHHHcCCceeEEEE
Q 018565 327 DYVLRQAGFSRYNITS 342 (354)
Q Consensus 327 ~~ll~~aGf~~~~~~~ 342 (354)
.+.++++||+.+++..
T Consensus 221 ~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 221 VLSLSASGMHHLETVE 236 (275)
T ss_dssp HHHSGGGTEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEE
Confidence 6677778888877765
No 130
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.32 E-value=5e-12 Score=106.69 Aligned_cols=102 Identities=16% Similarity=0.157 Sum_probs=81.0
Q ss_pred cCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-C-C--CcceEEEe
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-G-V--PEADAAII 253 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~-~--~~~D~i~~ 253 (354)
..+..+|||+|||+|..+..+++.+ |..+++++|+ +.+++.+++ .++++++.+|+.+ + . ..||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 3467899999999999999999985 6779999999 888888765 2689999999876 2 2 24999998
Q ss_pred cccccc-------CChHHHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 254 KWVLHD-------WGDDECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 254 ~~~lh~-------~~~~~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
...+.. ...+...++++++.++||| ||++++....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~-gG~l~~~~~~ 141 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVT-GGIITVVIYY 141 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEE-EEEEEEEECC
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcC-CCEEEEEEcc
Confidence 765511 1233456799999999999 9999987754
No 131
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.31 E-value=2.8e-11 Score=104.63 Aligned_cols=128 Identities=18% Similarity=0.102 Sum_probs=95.5
Q ss_pred cCCCceEEEecCC-ccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCC--CCCC--cceEEEecc
Q 018565 187 FDGIETLVDIGGN-DGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMF--DGVP--EADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G-~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~--~~~~--~~D~i~~~~ 255 (354)
..++.+|||+||| +|.++..+++.. ..+++++|+ +.+++.+++ ..+++++.+|+. .+.+ .||+|++..
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 3567899999999 999999999886 779999999 888888764 337999999963 3443 599999887
Q ss_pred ccccCChH-----------------HHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCc
Q 018565 256 VLHDWGDD-----------------ECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKG 318 (354)
Q Consensus 256 ~lh~~~~~-----------------~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g 318 (354)
..+..++. ...++++++.+.||| ||+++++-...
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~~~---------------------------- 182 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNP-GGKVALYLPDK---------------------------- 182 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEE-EEEEEEEEESC----------------------------
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCC-CeEEEEEeccc----------------------------
Confidence 76654332 136899999999999 99998853210
Q ss_pred ccCCHHHHHHHHHHcCCceeEEEEcCC
Q 018565 319 KERSLKEWDYVLRQAGFSRYNITSIHA 345 (354)
Q Consensus 319 ~~~t~~e~~~ll~~aGf~~~~~~~~~~ 345 (354)
....+++.+++++.||.+..+....+
T Consensus 183 -~~~~~~~~~~l~~~g~~~~~~~~~~g 208 (230)
T 3evz_A 183 -EKLLNVIKERGIKLGYSVKDIKFKVG 208 (230)
T ss_dssp -HHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred -HhHHHHHHHHHHHcCCceEEEEecCC
Confidence 01256788899999998776655444
No 132
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.30 E-value=2.7e-11 Score=106.94 Aligned_cols=124 Identities=11% Similarity=0.111 Sum_probs=94.7
Q ss_pred cC-CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-C--C--CcceEEE
Q 018565 187 FD-GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-G--V--PEADAAI 252 (354)
Q Consensus 187 ~~-~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~--~--~~~D~i~ 252 (354)
.. +..+|||+|||+|.++..++++.+. +++++|+ +.+++.+++ .++++++.+|+.+ + + ..||+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 45 6789999999999999999998765 9999999 888887765 3579999999988 3 3 2499999
Q ss_pred eccccccC------------------ChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcc
Q 018565 253 IKWVLHDW------------------GDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAH 314 (354)
Q Consensus 253 ~~~~lh~~------------------~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~ 314 (354)
++-..+.. .......+++.+.++|+| ||+++++- +.
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~---~~---------------------- 178 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQ-GGKANFVH---RP---------------------- 178 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEE-EEEEEEEE---CT----------------------
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccC-CcEEEEEE---cH----------------------
Confidence 96554322 112356799999999999 99999832 11
Q ss_pred cCCcccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 315 TNKGKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 315 ~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
....++..++++.||...++.++
T Consensus 179 ------~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 ------ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp ------TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred ------HHHHHHHHHHHHCCCceEEEEEe
Confidence 02556778888999988887665
No 133
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.29 E-value=7.2e-11 Score=101.26 Aligned_cols=129 Identities=11% Similarity=-0.012 Sum_probs=103.2
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCC-C--cceEEEeccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGV-P--EADAAIIKWV 256 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~-~--~~D~i~~~~~ 256 (354)
+++.+|+|||||+|..+..+++..|..+++++|+ +.+++.|++ .++|++..+|.++.. + +||+|++..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 3668999999999999999999988889999999 888888875 468999999999943 3 4999988765
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCc
Q 018565 257 LHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFS 336 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~ 336 (354)
. .+....+|....+.|++ +|++++.-. . ..+++.++|.+.||.
T Consensus 100 G----g~lI~~IL~~~~~~l~~-~~~lIlqp~------~--------------------------~~~~lr~~L~~~Gf~ 142 (230)
T 3lec_A 100 G----GRLIADILNNDIDKLQH-VKTLVLQPN------N--------------------------REDDLRKWLAANDFE 142 (230)
T ss_dssp C----HHHHHHHHHHTGGGGTT-CCEEEEEES------S--------------------------CHHHHHHHHHHTTEE
T ss_pred c----hHHHHHHHHHHHHHhCc-CCEEEEECC------C--------------------------ChHHHHHHHHHCCCE
Confidence 4 35677899999999999 898876321 0 266788999999999
Q ss_pred eeEEEEc---CCceeEEEEe
Q 018565 337 RYNITSI---HAVQSLIEAF 353 (354)
Q Consensus 337 ~~~~~~~---~~~~~~i~~~ 353 (354)
+.+..-+ +.++.+|.+.
T Consensus 143 i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 143 IVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp EEEEEEEEC--CEEEEEEEE
T ss_pred EEEEEEEEECCEEEEEEEEE
Confidence 9986654 3456677664
No 134
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.28 E-value=1.3e-11 Score=106.30 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=79.7
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCC---C-----Ccce
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDG---V-----PEAD 249 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~---~-----~~~D 249 (354)
..++.+|||||||+|..+..+++.+| +.+++++|+ +++++.+++ .++++++.+|+.+. . ..||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 34578999999999999999999988 789999999 888887764 35799999998762 1 3599
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeC
Q 018565 250 AAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIE 291 (354)
Q Consensus 250 ~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~ 291 (354)
+|++... ......+++++.+.|+| ||.+++.+...+
T Consensus 136 ~v~~d~~-----~~~~~~~l~~~~~~L~p-gG~lv~~~~~~~ 171 (223)
T 3duw_A 136 FIFIDAD-----KQNNPAYFEWALKLSRP-GTVIIGDNVVRE 171 (223)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTCCT-TCEEEEESCSGG
T ss_pred EEEEcCC-----cHHHHHHHHHHHHhcCC-CcEEEEeCCCcC
Confidence 9988654 33456899999999999 997777655443
No 135
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.28 E-value=1.1e-11 Score=108.69 Aligned_cols=98 Identities=14% Similarity=0.150 Sum_probs=79.8
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC--C-C---CcceEE
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD--G-V---PEADAA 251 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~--~-~---~~~D~i 251 (354)
..+..+|||||||+|..+..+++.+| +.+++++|+ +++++.+++ .++++++.+|+.+ + . ..||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 34678999999999999999999988 889999999 888887765 3589999999866 2 2 259999
Q ss_pred EeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 252 IIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 252 ~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
++.. +......+++++.++||| ||.|++.+...
T Consensus 141 ~~d~-----~~~~~~~~l~~~~~~Lkp-GG~lv~~~~~~ 173 (248)
T 3tfw_A 141 FIDA-----DKPNNPHYLRWALRYSRP-GTLIIGDNVVR 173 (248)
T ss_dssp EECS-----CGGGHHHHHHHHHHTCCT-TCEEEEECCSG
T ss_pred EECC-----chHHHHHHHHHHHHhcCC-CeEEEEeCCCc
Confidence 9854 234556899999999999 99888766544
No 136
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.28 E-value=5.4e-12 Score=109.04 Aligned_cols=114 Identities=10% Similarity=0.088 Sum_probs=88.9
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC--CCC---cceEEEeccccccC
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD--GVP---EADAAIIKWVLHDW 260 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~--~~~---~~D~i~~~~~lh~~ 260 (354)
.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~----- 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR----- 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES-----
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC-----
Confidence 35689999999999999999988 579999999 889888876 6789999999965 444 499999871
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeEE
Q 018565 261 GDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYNI 340 (354)
Q Consensus 261 ~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 340 (354)
+...+|++++++||| ||.++.. . ...+.+++.++++++||+..++
T Consensus 120 ---~~~~~l~~~~~~Lkp-gG~l~~~----~---------------------------~~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 120 ---GPTSVILRLPELAAP-DAHFLYV----G---------------------------PRLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp ---CCSGGGGGHHHHEEE-EEEEEEE----E---------------------------SSSCCTHHHHHHHHTTCEEEEE
T ss_pred ---CHHHHHHHHHHHcCC-CcEEEEe----C---------------------------CcCCHHHHHHHHHHCCCeEEEE
Confidence 223778999999999 9988810 0 0113456778888889888776
Q ss_pred EEc
Q 018565 341 TSI 343 (354)
Q Consensus 341 ~~~ 343 (354)
...
T Consensus 165 ~~~ 167 (226)
T 3m33_A 165 DHV 167 (226)
T ss_dssp EEE
T ss_pred Eee
Confidence 543
No 137
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.28 E-value=6.9e-12 Score=110.03 Aligned_cols=122 Identities=14% Similarity=0.118 Sum_probs=94.6
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CC-----CcceEEEe
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GV-----PEADAAII 253 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~-----~~~D~i~~ 253 (354)
..+..+|||||||+|..+..++..+|+.+++++|. +.+++.+++ ..+++++.+|+.+ +. ..||+|++
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 34678999999999999999999999999999999 888887764 3469999999877 33 35999998
Q ss_pred ccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHc
Q 018565 254 KWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQA 333 (354)
Q Consensus 254 ~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~a 333 (354)
..+- ....+++.+.+.||| ||++++.... .. . -...++...++..
T Consensus 158 ~a~~------~~~~ll~~~~~~Lkp-gG~l~~~~g~----~~-~-----------------------~e~~~~~~~l~~~ 202 (249)
T 3g89_A 158 RAVA------PLCVLSELLLPFLEV-GGAAVAMKGP----RV-E-----------------------EELAPLPPALERL 202 (249)
T ss_dssp ESSC------CHHHHHHHHGGGEEE-EEEEEEEECS----CC-H-----------------------HHHTTHHHHHHHH
T ss_pred CCcC------CHHHHHHHHHHHcCC-CeEEEEEeCC----Cc-H-----------------------HHHHHHHHHHHHc
Confidence 7642 235789999999999 9998875421 11 0 0133566778888
Q ss_pred CCceeEEEEc
Q 018565 334 GFSRYNITSI 343 (354)
Q Consensus 334 Gf~~~~~~~~ 343 (354)
||+..++.++
T Consensus 203 G~~~~~~~~~ 212 (249)
T 3g89_A 203 GGRLGEVLAL 212 (249)
T ss_dssp TEEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 9999888765
No 138
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.28 E-value=9.9e-12 Score=114.51 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=85.1
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCC-CCC-c
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFD-GVP-E 247 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~-~~~-~ 247 (354)
..+.+.+. ..+..+|||||||+|.++..+++. +..+++++|..+++..+++ .++++++.+|+.+ +.+ .
T Consensus 40 ~~i~~~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 40 RAILQNHT--DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHTGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHhccc--cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 34444444 446789999999999999988875 5669999999556666553 3789999999988 554 4
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEE
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
||+|++..+++++..+.....+.++++.||| ||.+++.
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~li~~ 154 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKP-SGNMFPT 154 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEE-EEEEESC
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCC-CeEEEEe
Confidence 9999999999888877778889999999999 9988853
No 139
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.27 E-value=2.8e-11 Score=101.12 Aligned_cols=113 Identities=22% Similarity=0.309 Sum_probs=90.3
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCC---CCcceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDG---VPEADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~---~~~~D~i~~~~ 255 (354)
..+..+|||+|||+|.++..+++.. .+++++|. +.+++.+++ ..++++..+|+.++ .+.||+|++..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGG 108 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECC
Confidence 5567899999999999999999876 78999999 888887764 26899999998762 24699999988
Q ss_pred ccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCC
Q 018565 256 VLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGF 335 (354)
Q Consensus 256 ~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf 335 (354)
++++ ...+++++.++|+| ||.+++..... .+..++.+++++.||
T Consensus 109 ~~~~-----~~~~l~~~~~~l~~-gG~l~~~~~~~------------------------------~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 109 SGGE-----LQEILRIIKDKLKP-GGRIIVTAILL------------------------------ETKFEAMECLRDLGF 152 (192)
T ss_dssp CTTC-----HHHHHHHHHHTEEE-EEEEEEEECBH------------------------------HHHHHHHHHHHHTTC
T ss_pred chHH-----HHHHHHHHHHhcCC-CcEEEEEecCc------------------------------chHHHHHHHHHHCCC
Confidence 8764 35889999999999 99998854310 024567888999999
Q ss_pred ce
Q 018565 336 SR 337 (354)
Q Consensus 336 ~~ 337 (354)
.+
T Consensus 153 ~~ 154 (192)
T 1l3i_A 153 DV 154 (192)
T ss_dssp CC
T ss_pred ce
Confidence 43
No 140
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.27 E-value=2e-11 Score=114.56 Aligned_cols=110 Identities=15% Similarity=0.264 Sum_probs=85.5
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhc-------cc-----C---CCeEEeecCC
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVA-------EK-----C---HGVEHVGGDM 241 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-------~~-----~---~~v~~~~~d~ 241 (354)
.+++.+. ..++.+|||||||+|.++..+++.++..+++++|+ +.+++.| +. . .+++++.+|.
T Consensus 233 ~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 233 DVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 3444455 56788999999999999999999888778999999 7776666 32 2 6899988754
Q ss_pred C-CC------CCcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCC
Q 018565 242 F-DG------VPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEED 293 (354)
Q Consensus 242 ~-~~------~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~ 293 (354)
+ .+ ..+||+|+++++++. ++....|+++.+.||| ||++++.+...+..
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~l~~---~d~~~~L~el~r~LKp-GG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNFLFD---EDLNKKVEKILQTAKV-GCKIISLKSLRSLT 365 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCTTCC---HHHHHHHHHHHTTCCT-TCEEEESSCSSCTT
T ss_pred cccccccccccCCCCEEEEeCcccc---ccHHHHHHHHHHhCCC-CeEEEEeeccCCcc
Confidence 4 32 235999999877742 4556789999999999 99999998776654
No 141
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.27 E-value=1.4e-11 Score=101.99 Aligned_cols=114 Identities=10% Similarity=0.017 Sum_probs=87.2
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--CCCeEEeecCCCC-CC---C--cceEEEecccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--CHGVEHVGGDMFD-GV---P--EADAAIIKWVL 257 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~-~~---~--~~D~i~~~~~l 257 (354)
..++.+|||||||. +.+|. +.+++.+++ ..++++..+|+.+ +. + .||+|++..++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 56789999999996 23787 888888875 3469999999987 44 4 39999999999
Q ss_pred ccC-ChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCc
Q 018565 258 HDW-GDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFS 336 (354)
Q Consensus 258 h~~-~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~ 336 (354)
|++ ++. .++|++++++||| ||++++.+........ ....++.++|.++|+++||
T Consensus 74 ~~~~~~~--~~~l~~~~r~Lkp-gG~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~aGf- 128 (176)
T 2ld4_A 74 GSTTLHS--AEILAEIARILRP-GGCLFLKEPVETAVDN---------------------NSKVKTASKLCSALTLSGL- 128 (176)
T ss_dssp TCCCCCC--HHHHHHHHHHEEE-EEEEEEEEEEESSSCS---------------------SSSSCCHHHHHHHHHHTTC-
T ss_pred hhcccCH--HHHHHHHHHHCCC-CEEEEEEccccccccc---------------------ccccCCHHHHHHHHHHCCC-
Confidence 998 554 5899999999999 9999996554322110 1123578999999999999
Q ss_pred eeEEEE
Q 018565 337 RYNITS 342 (354)
Q Consensus 337 ~~~~~~ 342 (354)
+. +..
T Consensus 129 i~-~~~ 133 (176)
T 2ld4_A 129 VE-VKE 133 (176)
T ss_dssp EE-EEE
T ss_pred cE-eec
Confidence 43 443
No 142
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.26 E-value=3.3e-11 Score=103.15 Aligned_cols=97 Identities=19% Similarity=0.276 Sum_probs=78.6
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-C--CC--cceEEEeccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-G--VP--EADAAIIKWV 256 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~~--~~D~i~~~~~ 256 (354)
+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ + ++ .||+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 467999999999999999999999999999999 888887764 3689999999987 3 43 4999998755
Q ss_pred cccCChH-------HHHHHHHHHHHhcCCCCceEEEEe
Q 018565 257 LHDWGDD-------ECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 257 lh~~~~~-------~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
.+ |+.. ....+++++.++|+| ||.+++..
T Consensus 121 ~~-~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~ 156 (214)
T 1yzh_A 121 DP-WPKKRHEKRRLTYKTFLDTFKRILPE-NGEIHFKT 156 (214)
T ss_dssp CC-CCSGGGGGGSTTSHHHHHHHHHHSCT-TCEEEEEE
T ss_pred CC-ccccchhhhccCCHHHHHHHHHHcCC-CcEEEEEe
Confidence 43 2211 124799999999999 99988853
No 143
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.26 E-value=1.7e-11 Score=109.04 Aligned_cols=148 Identities=11% Similarity=0.057 Sum_probs=96.7
Q ss_pred HHHhcCCCccC-CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhc-ccCCCeEEee-cCCCC----CCC--c
Q 018565 178 AIIEGCPEVFD-GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVA-EKCHGVEHVG-GDMFD----GVP--E 247 (354)
Q Consensus 178 ~~~~~~~~~~~-~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a-~~~~~v~~~~-~d~~~----~~~--~ 247 (354)
.++..+. .. .+.+|||||||+|.++..+++. +..+++++|+ +.|++.+ +...++.... .|+.. .+| .
T Consensus 75 ~~l~~~~--~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~ 151 (291)
T 3hp7_A 75 KALAVFN--LSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGL 151 (291)
T ss_dssp HHHHHTT--CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCC
T ss_pred HHHHhcC--CCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCC
Confidence 3444444 33 4679999999999999988886 4568999999 8888773 4345654433 34432 123 3
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcc-hhhhhhhccHHhhcccCCcccCCHHHH
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNK-FKSVRLMLDMVMMAHTNKGKERSLKEW 326 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~g~~~t~~e~ 326 (354)
||++++...+|++ ..+|.+++++|+| ||+++++- .|.... ... ........|-. -+.+..+++
T Consensus 152 fD~v~~d~sf~sl-----~~vL~e~~rvLkp-GG~lv~lv--kPqfe~-~~~~~~~~G~vrd~~-------~~~~~~~~v 215 (291)
T 3hp7_A 152 PSFASIDVSFISL-----NLILPALAKILVD-GGQVVALV--KPQFEA-GREQIGKNGIVRESS-------IHEKVLETV 215 (291)
T ss_dssp CSEEEECCSSSCG-----GGTHHHHHHHSCT-TCEEEEEE--CGGGTS-CGGGCC-CCCCCCHH-------HHHHHHHHH
T ss_pred CCEEEEEeeHhhH-----HHHHHHHHHHcCc-CCEEEEEE--Cccccc-ChhhcCCCCccCCHH-------HHHHHHHHH
Confidence 9999998887754 4789999999999 99998862 221111 100 00000000111 123368899
Q ss_pred HHHHHHcCCceeEEEEcC
Q 018565 327 DYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 327 ~~ll~~aGf~~~~~~~~~ 344 (354)
.++++++||++..+...|
T Consensus 216 ~~~~~~~Gf~v~~~~~sp 233 (291)
T 3hp7_A 216 TAFAVDYGFSVKGLDFSP 233 (291)
T ss_dssp HHHHHHTTEEEEEEEECS
T ss_pred HHHHHHCCCEEEEEEECC
Confidence 999999999998887654
No 144
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.26 E-value=2.5e-11 Score=103.94 Aligned_cols=97 Identities=19% Similarity=0.300 Sum_probs=77.1
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-C--CC--cceEEEeccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-G--VP--EADAAIIKWV 256 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~~--~~D~i~~~~~ 256 (354)
+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ + ++ .+|.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 457899999999999999999999999999999 888887764 3579999999887 3 43 4898877543
Q ss_pred cccCChHH-------HHHHHHHHHHhcCCCCceEEEEe
Q 018565 257 LHDWGDDE-------CIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 257 lh~~~~~~-------~~~~L~~~~~~L~p~gG~lli~e 287 (354)
.. |+... ...+++.+.++|+| ||.+++..
T Consensus 118 ~p-~~~~~~~~~rl~~~~~l~~~~~~Lkp-gG~l~~~t 153 (213)
T 2fca_A 118 DP-WPKKRHEKRRLTYSHFLKKYEEVMGK-GGSIHFKT 153 (213)
T ss_dssp CC-CCSGGGGGGSTTSHHHHHHHHHHHTT-SCEEEEEE
T ss_pred CC-CcCccccccccCcHHHHHHHHHHcCC-CCEEEEEe
Confidence 22 22110 25789999999999 99998854
No 145
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.25 E-value=1e-11 Score=106.69 Aligned_cols=97 Identities=12% Similarity=0.160 Sum_probs=77.0
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCC----CC--cceEEEecc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDG----VP--EADAAIIKW 255 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~----~~--~~D~i~~~~ 255 (354)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+. ++ .+|.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 467999999999999999999999999999999 888877654 35799999997662 33 489998874
Q ss_pred ccccCChH-HH------HHHHHHHHHhcCCCCceEEEEe
Q 018565 256 VLHDWGDD-EC------IKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 256 ~lh~~~~~-~~------~~~L~~~~~~L~p~gG~lli~e 287 (354)
... |+.. .. ..+++.++++||| ||.+++..
T Consensus 114 ~~p-~~~~~~~~rr~~~~~~l~~~~r~Lkp-GG~l~i~t 150 (218)
T 3dxy_A 114 PDP-WHKARHNKRRIVQVPFAELVKSKLQL-GGVFHMAT 150 (218)
T ss_dssp CCC-CCSGGGGGGSSCSHHHHHHHHHHEEE-EEEEEEEE
T ss_pred CCC-ccchhhhhhhhhhHHHHHHHHHHcCC-CcEEEEEe
Confidence 433 2222 11 2589999999999 99988865
No 146
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.24 E-value=2.7e-11 Score=106.24 Aligned_cols=100 Identities=19% Similarity=0.186 Sum_probs=81.5
Q ss_pred CCCceEEEecCCccHHHHHHHHH--CCCCeEEEeec-hHHhhhccc---CC-------C---------------------
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKA--FPRIRGINFDL-PHVVCVAEK---CH-------G--------------------- 233 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~--~p~~~~~~~D~-~~~~~~a~~---~~-------~--------------------- 233 (354)
.+..+|||+|||+|.++..+++. ++..+++++|+ +.+++.++. .. +
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 35689999999999999999998 77889999999 888888774 22 2
Q ss_pred ----eE-------------EeecCCCCCC-------C-cceEEEeccccccCCh-------HHHHHHHHHHHHhcCCCCc
Q 018565 234 ----VE-------------HVGGDMFDGV-------P-EADAAIIKWVLHDWGD-------DECIKILKNCKEAITKDKG 281 (354)
Q Consensus 234 ----v~-------------~~~~d~~~~~-------~-~~D~i~~~~~lh~~~~-------~~~~~~L~~~~~~L~p~gG 281 (354)
++ +..+|++++. + .||+|+++..++...+ +....++++++++|+| ||
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG 208 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA-HA 208 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT-TC
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC-Cc
Confidence 67 9999998843 3 5999999877665442 5667999999999999 99
Q ss_pred eEEEEee
Q 018565 282 KVIIVEA 288 (354)
Q Consensus 282 ~lli~e~ 288 (354)
.++++..
T Consensus 209 ~l~~~~~ 215 (250)
T 1o9g_A 209 VIAVTDR 215 (250)
T ss_dssp EEEEEES
T ss_pred EEEEeCc
Confidence 9998543
No 147
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.24 E-value=1.1e-11 Score=109.55 Aligned_cols=96 Identities=16% Similarity=0.147 Sum_probs=78.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCC--cceEEEeccccccCChH
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVP--EADAAIIKWVLHDWGDD 263 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~~~~ 263 (354)
+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ... .+..+|+.+ +++ .||+|++..+++++.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 5689999999999999999887 568999999 888888875 222 388889887 554 49999998876666433
Q ss_pred HHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 264 ECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 264 ~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
...+|++++++||| ||.+++....
T Consensus 131 -~~~~l~~~~~~Lkp-gG~l~~~~~~ 154 (260)
T 2avn_A 131 -KDKAFSEIRRVLVP-DGLLIATVDN 154 (260)
T ss_dssp -HHHHHHHHHHHEEE-EEEEEEEEEB
T ss_pred -HHHHHHHHHHHcCC-CeEEEEEeCC
Confidence 67899999999999 9999987653
No 148
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.23 E-value=1.1e-10 Score=101.07 Aligned_cols=129 Identities=13% Similarity=0.044 Sum_probs=102.0
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCCC---cceEEEeccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGVP---EADAAIIKWV 256 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~~---~~D~i~~~~~ 256 (354)
+++.+|+|||||+|.++..+++..|..+++++|+ +.+++.|++ .++|++..+|.++.++ +||+|++..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 3668999999999999999999988889999999 888888775 4689999999999543 3999988665
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCc
Q 018565 257 LHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFS 336 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~ 336 (354)
. .+....+|....+.|++ ++++++.-. . ..+.+.++|.+.||.
T Consensus 100 G----g~lI~~IL~~~~~~L~~-~~~lIlq~~------~--------------------------~~~~lr~~L~~~Gf~ 142 (244)
T 3gnl_A 100 G----GTLIRTILEEGAAKLAG-VTKLILQPN------I--------------------------AAWQLREWSEQNNWL 142 (244)
T ss_dssp C----HHHHHHHHHHTGGGGTT-CCEEEEEES------S--------------------------CHHHHHHHHHHHTEE
T ss_pred c----hHHHHHHHHHHHHHhCC-CCEEEEEcC------C--------------------------ChHHHHHHHHHCCCE
Confidence 3 45678899999999998 888877421 0 256778899999999
Q ss_pred eeEEEEc---CCceeEEEEe
Q 018565 337 RYNITSI---HAVQSLIEAF 353 (354)
Q Consensus 337 ~~~~~~~---~~~~~~i~~~ 353 (354)
+++..-+ ..++-+|.+.
T Consensus 143 i~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 143 ITSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEECCEEEEEEEEE
Confidence 9765433 4456666654
No 149
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.23 E-value=3.9e-11 Score=105.54 Aligned_cols=126 Identities=14% Similarity=0.128 Sum_probs=96.8
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKA-FPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~ 246 (354)
..++..++ ..+..+|||+|||+|.++..+++. .|..+++++|. +.+++.+++ .+++++..+|+.+ +++
T Consensus 86 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 86 SAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 34555566 677889999999999999999998 78899999999 888887764 2689999999988 455
Q ss_pred --cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHH
Q 018565 247 --EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLK 324 (354)
Q Consensus 247 --~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~ 324 (354)
.||+|++. +++. ..+++++.++|+| ||++++.+.... ...
T Consensus 164 ~~~~D~v~~~-----~~~~--~~~l~~~~~~L~~-gG~l~~~~~~~~------------------------------~~~ 205 (258)
T 2pwy_A 164 EAAYDGVALD-----LMEP--WKVLEKAALALKP-DRFLVAYLPNIT------------------------------QVL 205 (258)
T ss_dssp TTCEEEEEEE-----SSCG--GGGHHHHHHHEEE-EEEEEEEESCHH------------------------------HHH
T ss_pred CCCcCEEEEC-----CcCH--HHHHHHHHHhCCC-CCEEEEEeCCHH------------------------------HHH
Confidence 49999972 3333 3789999999999 999998663210 134
Q ss_pred HHHHHHHHcCCceeEEEE
Q 018565 325 EWDYVLRQAGFSRYNITS 342 (354)
Q Consensus 325 e~~~ll~~aGf~~~~~~~ 342 (354)
++.+.++++||..+++..
T Consensus 206 ~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 206 ELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp HHHHHHTTTTEEEEEEEE
T ss_pred HHHHHHHHCCCceEEEEE
Confidence 556667778888776654
No 150
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.23 E-value=1e-10 Score=104.24 Aligned_cols=120 Identities=11% Similarity=0.065 Sum_probs=93.5
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC-cceEEEecccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP-EADAAIIKWVL 257 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~-~~D~i~~~~~l 257 (354)
.++.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++ .++++++.+|+.+ ..+ .||+|++....
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch
Confidence 35789999999999999999998776 8999999 888887764 3569999999998 333 49999885431
Q ss_pred ccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCce
Q 018565 258 HDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSR 337 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 337 (354)
...++++++.++|+| ||.+++.+........ ....+++.+.++++||+.
T Consensus 203 ------~~~~~l~~~~~~Lkp-gG~l~~~~~~~~~~~~------------------------~~~~~~i~~~~~~~G~~~ 251 (278)
T 2frn_A 203 ------RTHEFIPKALSIAKD-GAIIHYHNTVPEKLMP------------------------REPFETFKRITKEYGYDV 251 (278)
T ss_dssp ------SGGGGHHHHHHHEEE-EEEEEEEEEEEGGGTT------------------------TTTHHHHHHHHHHTTCEE
T ss_pred ------hHHHHHHHHHHHCCC-CeEEEEEEeecccccc------------------------ccHHHHHHHHHHHcCCee
Confidence 224789999999999 9999988765321111 123677889999999988
Q ss_pred eE
Q 018565 338 YN 339 (354)
Q Consensus 338 ~~ 339 (354)
..
T Consensus 252 ~~ 253 (278)
T 2frn_A 252 EK 253 (278)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 151
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.23 E-value=4.1e-11 Score=102.12 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=80.3
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCC---Cc
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGV---PE 247 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~---~~ 247 (354)
.++..+. ..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..++++..+|..+.. .+
T Consensus 68 ~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 143 (210)
T 3lbf_A 68 RMTELLE--LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAP 143 (210)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred HHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCC
Confidence 3344444 567889999999999999999998 678999999 888887764 357999999998832 25
Q ss_pred ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
||+|++..++|++++ ++.+.||| ||++++.-.
T Consensus 144 ~D~i~~~~~~~~~~~--------~~~~~L~p-gG~lv~~~~ 175 (210)
T 3lbf_A 144 FDAIIVTAAPPEIPT--------ALMTQLDE-GGILVLPVG 175 (210)
T ss_dssp EEEEEESSBCSSCCT--------HHHHTEEE-EEEEEEEEC
T ss_pred ccEEEEccchhhhhH--------HHHHhccc-CcEEEEEEc
Confidence 999999999999875 46789999 999988654
No 152
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.23 E-value=1.4e-11 Score=104.68 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=75.8
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCC--CcceEEEecccccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGV--PEADAAIIKWVLHD 259 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~--~~~D~i~~~~~lh~ 259 (354)
+..+|||+|||+|..+..+++.+|+.+++++|. +.+++.++. ..++++..+|+.+.. ..||+|++..+ +
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~-~- 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF-A- 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS-S-
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc-C-
Confidence 367999999999999999999999999999999 888887764 245999999998833 35999997543 2
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEE
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
....+++++.++|+| ||.+++.
T Consensus 143 ----~~~~~l~~~~~~L~~-gG~l~~~ 164 (207)
T 1jsx_A 143 ----SLNDMVSWCHHLPGE-QGRFYAL 164 (207)
T ss_dssp ----SHHHHHHHHTTSEEE-EEEEEEE
T ss_pred ----CHHHHHHHHHHhcCC-CcEEEEE
Confidence 235889999999999 9998885
No 153
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.23 E-value=3.7e-11 Score=102.78 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=81.4
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCCC---
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGVP--- 246 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~~--- 246 (354)
.++..+. ..+..+|||||||+|.++..+++.. |+.+++++|. +.+++.+++ ..++++..+|+..+.+
T Consensus 68 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 68 MMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred HHHHhhC--CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence 3444444 5677899999999999999999987 6689999999 888887765 2579999999876443
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
+||+|++..++|++++ ++.+.||| ||++++...
T Consensus 146 ~fD~v~~~~~~~~~~~--------~~~~~L~p-gG~lv~~~~ 178 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIPE--------PLIRQLKD-GGKLLMPVG 178 (215)
T ss_dssp CEEEEEESSBBSSCCH--------HHHHTEEE-EEEEEEEES
T ss_pred CeeEEEECCchHHHHH--------HHHHHcCC-CcEEEEEEC
Confidence 5999999999998773 67889999 999998753
No 154
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.22 E-value=2e-11 Score=116.85 Aligned_cols=106 Identities=13% Similarity=0.108 Sum_probs=86.2
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCC-CCC-
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFD-GVP- 246 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~-~~~- 246 (354)
...+++.+. ..+..+|||||||+|.++..+++ .+..+++++|+..+++.+++ .++++++.+|+.+ +.+
T Consensus 147 ~~~il~~l~--~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~ 223 (480)
T 3b3j_A 147 QRAILQNHT--DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 223 (480)
T ss_dssp HHHHHHTGG--GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHHHhhh--hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCC
Confidence 344555554 44668999999999999998877 57789999999557776654 3789999999998 655
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEE
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
.||+|++..++|++..+.....+.+++++||| ||.+++
T Consensus 224 ~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~Lkp-gG~li~ 261 (480)
T 3b3j_A 224 QVDIIISEPMGYMLFNERMLESYLHAKKYLKP-SGNMFP 261 (480)
T ss_dssp CEEEEECCCCHHHHTCHHHHHHHHHGGGGEEE-EEEEES
T ss_pred CeEEEEEeCchHhcCcHHHHHHHHHHHHhcCC-CCEEEE
Confidence 49999998888888777778889999999999 998885
No 155
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.20 E-value=4.4e-11 Score=104.45 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=80.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC--C-C------Ccce
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD--G-V------PEAD 249 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~--~-~------~~~D 249 (354)
.+..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ .++|+++.+|..+ + . ..||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 3568999999999999999999886 789999999 888877764 3689999999876 2 2 4599
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCC
Q 018565 250 AAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEE 292 (354)
Q Consensus 250 ~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~ 292 (354)
+|++... ......+++++.+.|+| ||.|++-+.....
T Consensus 139 ~V~~d~~-----~~~~~~~l~~~~~~Lkp-GG~lv~d~~~~~g 175 (242)
T 3r3h_A 139 FIFIDAD-----KTNYLNYYELALKLVTP-KGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEESC-----GGGHHHHHHHHHHHEEE-EEEEEEECSSSSS
T ss_pred EEEEcCC-----hHHhHHHHHHHHHhcCC-CeEEEEECCccCC
Confidence 9988653 33456789999999999 9988887665543
No 156
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.20 E-value=1.2e-10 Score=96.58 Aligned_cols=113 Identities=14% Similarity=0.180 Sum_probs=89.3
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCCC--cceEEEecccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGVP--EADAAIIKWVL 257 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~~--~~D~i~~~~~l 257 (354)
..+..+|||+|||+|.++..+++ +..+++++|+ +.+++.+++ .+++++..+|+.++.+ .||+|++..+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGT- 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCc-
Confidence 45678999999999999999988 7889999999 888887765 2689999999987443 5999999887
Q ss_pred ccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCce
Q 018565 258 HDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSR 337 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 337 (354)
+ ....+++++++. | ||.+++..... . +..++.+.+++.||.+
T Consensus 110 ~-----~~~~~l~~~~~~--~-gG~l~~~~~~~------~------------------------~~~~~~~~l~~~g~~~ 151 (183)
T 2yxd_A 110 K-----NIEKIIEILDKK--K-INHIVANTIVL------E------------------------NAAKIINEFESRGYNV 151 (183)
T ss_dssp S-----CHHHHHHHHHHT--T-CCEEEEEESCH------H------------------------HHHHHHHHHHHTTCEE
T ss_pred c-----cHHHHHHHHhhC--C-CCEEEEEeccc------c------------------------cHHHHHHHHHHcCCeE
Confidence 2 345788888888 8 99999865311 0 1456778899999876
Q ss_pred eEE
Q 018565 338 YNI 340 (354)
Q Consensus 338 ~~~ 340 (354)
..+
T Consensus 152 ~~~ 154 (183)
T 2yxd_A 152 DAV 154 (183)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 157
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.20 E-value=6.8e-11 Score=105.36 Aligned_cols=101 Identities=19% Similarity=0.218 Sum_probs=81.9
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCCC-
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKA-FPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGVP- 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~~- 246 (354)
..++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++ .+++++..+|+.+.++
T Consensus 102 ~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 179 (277)
T 1o54_A 102 SFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE 179 (277)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC
T ss_pred HHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC
Confidence 34555555 667889999999999999999998 68899999999 888887764 1589999999988543
Q ss_pred -cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 247 -EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 247 -~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
.||+|++. .++. ..+++++.++|+| ||.+++.+
T Consensus 180 ~~~D~V~~~-----~~~~--~~~l~~~~~~L~p-gG~l~~~~ 213 (277)
T 1o54_A 180 KDVDALFLD-----VPDP--WNYIDKCWEALKG-GGRFATVC 213 (277)
T ss_dssp CSEEEEEEC-----CSCG--GGTHHHHHHHEEE-EEEEEEEE
T ss_pred CccCEEEEC-----CcCH--HHHHHHHHHHcCC-CCEEEEEe
Confidence 49999982 3333 3789999999999 99999866
No 158
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.19 E-value=8.3e-11 Score=108.32 Aligned_cols=96 Identities=18% Similarity=0.194 Sum_probs=77.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCC-CCC--cceEEEecccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFD-GVP--EADAAIIKWVL 257 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~-~~~--~~D~i~~~~~l 257 (354)
.+..+|||||||+|.++..+++. +..+++++|+.++++.+++ .++++++.+|+.+ +.+ .||+|++..+.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 45689999999999999999987 6669999999657777664 4569999999998 555 49999997665
Q ss_pred ccC-ChHHHHHHHHHHHHhcCCCCceEEE
Q 018565 258 HDW-GDDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 258 h~~-~~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
+.+ .......+++.+.++||| ||.++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~Lkp-gG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAP-DGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEE-EEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCC-CCEEcc
Confidence 443 234566899999999999 998874
No 159
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.18 E-value=9.4e-11 Score=98.23 Aligned_cols=98 Identities=9% Similarity=-0.013 Sum_probs=79.9
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-C--C--CcceEEEeccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-G--V--PEADAAIIKWV 256 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~--~~~D~i~~~~~ 256 (354)
++.+|||+|||+|.++..+++. +..+++++|+ +++++.+++ .++++++.+|+.+ . . ..||+|++...
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 5689999999999999987774 5568999999 889888775 2589999999887 2 2 35999999887
Q ss_pred cccCChHHHHHHHHHHHH--hcCCCCceEEEEeee
Q 018565 257 LHDWGDDECIKILKNCKE--AITKDKGKVIIVEAI 289 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~--~L~p~gG~lli~e~~ 289 (354)
+|+ ..+...++++.+.+ +|+| ||.+++....
T Consensus 123 ~~~-~~~~~~~~l~~~~~~~~L~p-gG~l~~~~~~ 155 (189)
T 3p9n_A 123 YNV-DSADVDAILAALGTNGWTRE-GTVAVVERAT 155 (189)
T ss_dssp TTS-CHHHHHHHHHHHHHSSSCCT-TCEEEEEEET
T ss_pred CCc-chhhHHHHHHHHHhcCccCC-CeEEEEEecC
Confidence 664 34567789999999 9999 9999886544
No 160
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.18 E-value=6.4e-11 Score=104.57 Aligned_cols=99 Identities=11% Similarity=0.182 Sum_probs=77.9
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---C-------CCeEEeecCCCCC--------CC-
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---C-------HGVEHVGGDMFDG--------VP- 246 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~-------~~v~~~~~d~~~~--------~~- 246 (354)
..+..+|||+|||+|..+..+++++|..+++++|+ +.+++.+++ . ++++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 45678999999999999999999999999999999 888887764 1 2699999999874 22
Q ss_pred -cceEEEecccccc----------------CChHHHHHHHHHHHHhcCCCCceEEEE
Q 018565 247 -EADAAIIKWVLHD----------------WGDDECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 247 -~~D~i~~~~~lh~----------------~~~~~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
.||+|+++-..+. ........+++.+.+.||| ||+++++
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~ 169 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVS-GGQLSLI 169 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEE-EEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCC-CCEEEEE
Confidence 4999999743322 1222356889999999999 9999874
No 161
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.18 E-value=9.5e-11 Score=108.91 Aligned_cols=96 Identities=13% Similarity=0.085 Sum_probs=81.5
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC--cceEEEecccccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP--EADAAIIKWVLHD 259 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~ 259 (354)
+..+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ ...++++.+|+.+ ..+ .||+|+++..+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 5679999999999999999987 569999999 888887765 3358999999998 443 5999999999887
Q ss_pred ---CChHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 260 ---WGDDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 260 ---~~~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
...+...++++++.+.|+| ||.++++.
T Consensus 311 ~~~~~~~~~~~~l~~~~~~Lkp-GG~l~iv~ 340 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRP-GGVFFLVS 340 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEE-EEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCc-CcEEEEEE
Confidence 3456678999999999999 99999864
No 162
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.17 E-value=9.6e-11 Score=101.88 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=77.4
Q ss_pred CCceEEEecCCccHHHHHHHHH----CCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCCC--C---C--cceEEEecc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKA----FPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFDG--V---P--EADAAIIKW 255 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~~--~---~--~~D~i~~~~ 255 (354)
+..+|||||||+|..+..+++. .|+.+++++|+ +++++.++. .++|+++.+|..+. . . +||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 3579999999999999999987 78899999999 888887765 57899999999873 1 2 499998765
Q ss_pred ccccCChHHHHHHHHHHHH-hcCCCCceEEEEee
Q 018565 256 VLHDWGDDECIKILKNCKE-AITKDKGKVIIVEA 288 (354)
Q Consensus 256 ~lh~~~~~~~~~~L~~~~~-~L~p~gG~lli~e~ 288 (354)
. |. ...++|+++.+ .||| ||.+++.+.
T Consensus 161 ~-~~----~~~~~l~~~~r~~Lkp-GG~lv~~d~ 188 (236)
T 2bm8_A 161 A-HA----NTFNIMKWAVDHLLEE-GDYFIIEDM 188 (236)
T ss_dssp S-CS----SHHHHHHHHHHHTCCT-TCEEEECSC
T ss_pred c-hH----hHHHHHHHHHHhhCCC-CCEEEEEeC
Confidence 4 42 34678999997 9999 999998654
No 163
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.17 E-value=4.2e-11 Score=103.89 Aligned_cols=97 Identities=13% Similarity=0.212 Sum_probs=79.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCC-----CcceEEEec
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGV-----PEADAAIIK 254 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~-----~~~D~i~~~ 254 (354)
.+..+|||||||+|..+..+++.+|+.+++++|+ +++++.+++ .++++++.+|+.+.. ..||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 4578999999999999999999888999999999 888888765 358999999998732 359999975
Q ss_pred cccccCChHHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 255 WVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 255 ~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
.. ......+++++.+.||| ||.+++-+...
T Consensus 150 ~~-----~~~~~~~l~~~~~~Lkp-gG~lv~d~~~~ 179 (232)
T 3ntv_A 150 AA-----KAQSKKFFEIYTPLLKH-QGLVITDNVLY 179 (232)
T ss_dssp TT-----SSSHHHHHHHHGGGEEE-EEEEEEECTTG
T ss_pred Cc-----HHHHHHHHHHHHHhcCC-CeEEEEeeCCc
Confidence 43 23356799999999999 99887755443
No 164
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.17 E-value=1.2e-10 Score=100.75 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=80.4
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCCCC---Ccc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFDGV---PEA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~~~---~~~ 248 (354)
..+++.+. ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..+++++.+|+.+.. .+|
T Consensus 60 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~f 135 (231)
T 1vbf_A 60 IFMLDELD--LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPY 135 (231)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCc
Confidence 34444454 5677899999999999999999985 68999999 888888775 128999999998732 249
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
|+|++..++|++++ ++.+.|+| ||++++...
T Consensus 136 D~v~~~~~~~~~~~--------~~~~~L~p-gG~l~~~~~ 166 (231)
T 1vbf_A 136 DRVVVWATAPTLLC--------KPYEQLKE-GGIMILPIG 166 (231)
T ss_dssp EEEEESSBBSSCCH--------HHHHTEEE-EEEEEEEEC
T ss_pred cEEEECCcHHHHHH--------HHHHHcCC-CcEEEEEEc
Confidence 99999999998774 57789999 999998764
No 165
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.17 E-value=7.9e-11 Score=102.29 Aligned_cols=98 Identities=12% Similarity=0.146 Sum_probs=74.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------------CCCeEEeecCCCC--C--CC--cc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------------CHGVEHVGGDMFD--G--VP--EA 248 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~--~--~~--~~ 248 (354)
.+..+|||||||+|.++..+++.+|+..++++|+ +.+++.+++ ..+++++.+|+.+ + ++ .+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4567999999999999999999999999999999 888775531 4689999999986 3 33 48
Q ss_pred eEEEeccccccCChH-H------HHHHHHHHHHhcCCCCceEEEEe
Q 018565 249 DAAIIKWVLHDWGDD-E------CIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 249 D~i~~~~~lh~~~~~-~------~~~~L~~~~~~L~p~gG~lli~e 287 (354)
|.|++...-. |... . ...+|+++.++||| ||.+++..
T Consensus 125 D~v~~~~~dp-~~k~~h~krr~~~~~~l~~~~~~Lkp-GG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPDP-HFKRTKHKWRIISPTLLAEYAYVLRV-GGLVYTIT 168 (235)
T ss_dssp EEEEEESCC------------CCCHHHHHHHHHHEEE-EEEEEEEE
T ss_pred eEEEEeCCCc-hhhhhhhhhhhhhHHHHHHHHHHCCC-CCEEEEEe
Confidence 9988643321 1110 0 13699999999999 99998864
No 166
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.17 E-value=4.6e-11 Score=102.77 Aligned_cols=98 Identities=12% Similarity=0.232 Sum_probs=77.8
Q ss_pred CCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC---CC------Ccce
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD---GV------PEAD 249 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~---~~------~~~D 249 (354)
.+..+|||||||+|..+..+++..+ +.+++++|+ +.+++.+++ .++++++.+|+.+ .. ..||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 4568999999999999999999764 889999999 888888765 3579999999744 12 3599
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 250 AAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 250 ~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
+|++....+++. ...++++.+ +.||| ||.+++.+..
T Consensus 137 ~V~~d~~~~~~~--~~~~~~~~~-~~Lkp-gG~lv~~~~~ 172 (221)
T 3u81_A 137 MVFLDHWKDRYL--PDTLLLEKC-GLLRK-GTVLLADNVI 172 (221)
T ss_dssp EEEECSCGGGHH--HHHHHHHHT-TCCCT-TCEEEESCCC
T ss_pred EEEEcCCcccch--HHHHHHHhc-cccCC-CeEEEEeCCC
Confidence 999988777643 334677777 99999 9988774443
No 167
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.16 E-value=1.5e-11 Score=106.58 Aligned_cols=139 Identities=14% Similarity=0.081 Sum_probs=84.1
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeec-CCC----CCCC--cceEEEecccccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGG-DMF----DGVP--EADAAIIKWVLHD 259 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~-d~~----~~~~--~~D~i~~~~~lh~ 259 (354)
.+.+|||||||+|.++..+++. ...+++++|+ +.+++.+++ ..++..... ++. .+.+ .+|.+.+..++.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 4579999999999999999987 3348999999 888877554 333332211 111 1111 1344444434333
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCc-chhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCcee
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDN-KFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRY 338 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 338 (354)
+ ..+|++++++||| ||++++.. .+.... .. .........+-. ....+.+++.++++++||++.
T Consensus 116 l-----~~~l~~i~rvLkp-gG~lv~~~--~p~~e~-~~~~~~~~G~~~d~~-------~~~~~~~~l~~~l~~aGf~v~ 179 (232)
T 3opn_A 116 L-----DLILPPLYEILEK-NGEVAALI--KPQFEA-GREQVGKNGIIRDPK-------VHQMTIEKVLKTATQLGFSVK 179 (232)
T ss_dssp G-----GGTHHHHHHHSCT-TCEEEEEE--CHHHHS-CHHHHC-CCCCCCHH-------HHHHHHHHHHHHHHHHTEEEE
T ss_pred H-----HHHHHHHHHhccC-CCEEEEEE--Cccccc-CHHHhCcCCeecCcc-------hhHHHHHHHHHHHHHCCCEEE
Confidence 2 4789999999999 99999853 111001 00 000000000111 122368999999999999999
Q ss_pred EEEEcC
Q 018565 339 NITSIH 344 (354)
Q Consensus 339 ~~~~~~ 344 (354)
.+...+
T Consensus 180 ~~~~~p 185 (232)
T 3opn_A 180 GLTFSP 185 (232)
T ss_dssp EEEECS
T ss_pred EEEEcc
Confidence 886653
No 168
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.16 E-value=1.1e-10 Score=96.02 Aligned_cols=97 Identities=21% Similarity=0.242 Sum_probs=78.4
Q ss_pred cCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeechHHhhhcccCCCeEEeecCCCC-C--------CC--cceEEEec
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDLPHVVCVAEKCHGVEHVGGDMFD-G--------VP--EADAAIIK 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~--------~~--~~D~i~~~ 254 (354)
..+..+|||+|||+|.++..+++.+ |+.+++++|+..++. ..++++..+|+.+ + .+ .||+|++.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----cCcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 3466799999999999999999984 778999999944433 2679999999988 4 44 49999999
Q ss_pred cccccCChHH---------HHHHHHHHHHhcCCCCceEEEEee
Q 018565 255 WVLHDWGDDE---------CIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 255 ~~lh~~~~~~---------~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.++|..+... ...+++++.++|+| ||.+++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~-gG~l~~~~~ 137 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAP-GGSFVVKVF 137 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEEE
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCC-CcEEEEEEe
Confidence 8888765431 15889999999999 999998664
No 169
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.16 E-value=9.1e-11 Score=104.86 Aligned_cols=94 Identities=18% Similarity=0.184 Sum_probs=75.4
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCCC-cc---eEEEec--
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGVP-EA---DAAIIK-- 254 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~~-~~---D~i~~~-- 254 (354)
+..+|||+|||+|.++..+++. |+.+++++|+ +.+++.+++ .++++++.+|++++.+ .| |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCC
Confidence 4579999999999999999999 9999999999 888888765 3469999999998543 58 999996
Q ss_pred ----------cccccCChH------HHHHHHHHHH-HhcCCCCceEEE
Q 018565 255 ----------WVLHDWGDD------ECIKILKNCK-EAITKDKGKVII 285 (354)
Q Consensus 255 ----------~~lh~~~~~------~~~~~L~~~~-~~L~p~gG~lli 285 (354)
.+. +.|.. +...+++++. +.++| ||.+++
T Consensus 202 yi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~p-gG~l~~ 247 (284)
T 1nv8_A 202 YVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTS-GKIVLM 247 (284)
T ss_dssp CBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCT-TCEEEE
T ss_pred CCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCC-CCEEEE
Confidence 222 22221 1237899999 99999 998886
No 170
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.16 E-value=4.7e-11 Score=103.01 Aligned_cols=135 Identities=10% Similarity=0.009 Sum_probs=99.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCCC-CC-cceEEEecccccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFDG-VP-EADAAIIKWVLHD 259 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~-~~-~~D~i~~~~~lh~ 259 (354)
.++.+|||||||+|-++..+....|..+++++|+ +.+++.++. ..+.++...|+..+ .+ +||++++.-++|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 4578999999999999999999999999999999 888888765 56688999999984 33 4999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCceeE
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRYN 339 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 339 (354)
+.++.....+ ++.++|+| +|.++-.+. ..-.+. .+ +-...-...|.+.+.+.|+...+
T Consensus 211 Le~q~kg~g~-~ll~aL~~-~~vvVSfp~-ksl~Gr-s~------------------gm~~~Y~~~~e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNS-PNIVVTFPT-KSLGQR-SK------------------GMFQNYSQSFESQARERSCRIQR 268 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSC-SEEEEEEEC-C--------------------------CHHHHHHHHHHHHHHHHTCCEEE
T ss_pred hhhhhhHHHH-HHHHHhCC-CCEEEeccc-hhhcCC-Cc------------------chhhHHHHHHHHHHHhcCCceee
Confidence 9888776777 89999999 654443333 111111 00 00111267888999999985544
Q ss_pred EEEcCC
Q 018565 340 ITSIHA 345 (354)
Q Consensus 340 ~~~~~~ 345 (354)
..+++
T Consensus 269 -~~~~n 273 (281)
T 3lcv_B 269 -LEIGN 273 (281)
T ss_dssp -EEETT
T ss_pred -eeecC
Confidence 44443
No 171
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.15 E-value=8.5e-11 Score=102.09 Aligned_cols=100 Identities=18% Similarity=0.229 Sum_probs=80.4
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCCC---
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGVP--- 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~~--- 246 (354)
..+++.+. ..+..+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..++++..+|+..+++
T Consensus 81 ~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (235)
T 1jg1_A 81 AIMLEIAN--LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKA 157 (235)
T ss_dssp HHHHHHHT--CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCC
Confidence 34444444 56778999999999999999999987 89999998 888887765 2469999999855543
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
+||+|++..+++++++ ++.+.|+| ||++++...
T Consensus 158 ~fD~Ii~~~~~~~~~~--------~~~~~L~p-gG~lvi~~~ 190 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPE--------PLIEQLKI-GGKLIIPVG 190 (235)
T ss_dssp CEEEEEECSBBSSCCH--------HHHHTEEE-EEEEEEEEC
T ss_pred CccEEEECCcHHHHHH--------HHHHhcCC-CcEEEEEEe
Confidence 3999999999998764 57789999 999988653
No 172
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.15 E-value=8e-11 Score=105.86 Aligned_cols=97 Identities=13% Similarity=0.225 Sum_probs=78.7
Q ss_pred ceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC---CC--CcceEEEeccccc
Q 018565 191 ETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD---GV--PEADAAIIKWVLH 258 (354)
Q Consensus 191 ~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~---~~--~~~D~i~~~~~lh 258 (354)
.+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ .++++++.+|..+ .. ..||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 4999999999999999999999999999999 999998875 4689999999876 23 2599999865544
Q ss_pred cCChHH--HHHHHHHHHHhcCCCCceEEEEee
Q 018565 259 DWGDDE--CIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 259 ~~~~~~--~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
...... ..++++.++++|+| ||.+++...
T Consensus 171 ~~~~~~L~t~efl~~~~r~Lkp-gGvlv~~~~ 201 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAP-GGLYVANCG 201 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEE-EEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCC-CcEEEEEec
Confidence 322222 25899999999999 998877553
No 173
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.14 E-value=5.4e-11 Score=102.49 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=79.7
Q ss_pred CCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC--C-C------Ccce
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD--G-V------PEAD 249 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~--~-~------~~~D 249 (354)
.+..+|||||||+|..+..+++.+| +.+++++|+ +++++.+++ .++++++.+|..+ + . ..||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 3567999999999999999999987 889999999 888887764 3679999999865 2 1 4699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeC
Q 018565 250 AAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIE 291 (354)
Q Consensus 250 ~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~ 291 (354)
+|++... ......+++++.+.|+| ||.+++.+...+
T Consensus 143 ~v~~~~~-----~~~~~~~l~~~~~~L~p-gG~lv~~~~~~~ 178 (225)
T 3tr6_A 143 LIYIDAD-----KANTDLYYEESLKLLRE-GGLIAVDNVLRR 178 (225)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEE-EEEEEEECSSGG
T ss_pred EEEECCC-----HHHHHHHHHHHHHhcCC-CcEEEEeCCCcC
Confidence 9996442 34456899999999999 999988766544
No 174
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.14 E-value=1.9e-10 Score=105.55 Aligned_cols=96 Identities=17% Similarity=0.193 Sum_probs=76.1
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCC-CCC--cceEEEeccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFD-GVP--EADAAIIKWV 256 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~-~~~--~~D~i~~~~~ 256 (354)
..+..+|||||||+|.++..+++. +..+++++|..++++.+++ .++++++.+|+.+ +++ .||+|++..+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 456789999999999999998886 4568999999547777664 2789999999988 555 4999998764
Q ss_pred cccC-ChHHHHHHHHHHHHhcCCCCceEE
Q 018565 257 LHDW-GDDECIKILKNCKEAITKDKGKVI 284 (354)
Q Consensus 257 lh~~-~~~~~~~~L~~~~~~L~p~gG~ll 284 (354)
.+.+ .......+|+++.++||| ||.++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~Lkp-gG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAK-GGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEE-EEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCC-CcEEE
Confidence 3322 133456899999999999 99887
No 175
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.14 E-value=1.2e-10 Score=108.36 Aligned_cols=100 Identities=17% Similarity=0.129 Sum_probs=80.1
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCC-CCC-cceEEEecccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFD-GVP-EADAAIIKWVL 257 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~-~~~-~~D~i~~~~~l 257 (354)
..++.+|||||||+|.++..++++. ..+++++|...+++.+++ .++++++.+|+.+ +.+ .||+|++..+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 4567899999999999999999873 348999999777776654 4679999999988 554 59999997766
Q ss_pred ccCCh-HHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 258 HDWGD-DECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 258 h~~~~-~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
|.... .....+++.+.+.||| ||.+++.+.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~Lkp-gG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKP-TGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEE-EEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCCC-CeEEEEecC
Confidence 66543 3466799999999999 998877554
No 176
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.14 E-value=1.6e-10 Score=105.12 Aligned_cols=101 Identities=17% Similarity=0.258 Sum_probs=81.7
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCC---
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGV--- 245 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~--- 245 (354)
..+++.+. ..++.+|||||||+|.++..+++..+ +.+++++|+ +++++.+++ ..++++..+|+.+..
T Consensus 65 ~~l~~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~ 142 (317)
T 1dl5_A 65 ALFMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEF 142 (317)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHHHhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccC
Confidence 34444455 56778999999999999999999877 478999999 888887764 256999999998732
Q ss_pred CcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 246 PEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 246 ~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.+||+|++..++|+++ +++.+.||| ||++++...
T Consensus 143 ~~fD~Iv~~~~~~~~~--------~~~~~~Lkp-gG~lvi~~~ 176 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP--------ETWFTQLKE-GGRVIVPIN 176 (317)
T ss_dssp CCEEEEEECSBBSCCC--------HHHHHHEEE-EEEEEEEBC
T ss_pred CCeEEEEEcCCHHHHH--------HHHHHhcCC-CcEEEEEEC
Confidence 3599999999999877 367789999 999998753
No 177
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.13 E-value=1.2e-10 Score=100.91 Aligned_cols=97 Identities=14% Similarity=0.186 Sum_probs=80.5
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCC---C---CcceEEEe
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDG---V---PEADAAII 253 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~---~---~~~D~i~~ 253 (354)
.+..+|||||||+|..+..+++.+|+.+++++|+ +.+++.+++ .+++++..+|+.+. . ..||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 4567999999999999999999999999999999 888887765 25799999999872 2 35999999
Q ss_pred ccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 254 KWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 254 ~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
....+ ....+++++.+.|+| ||.+++.+...
T Consensus 133 ~~~~~-----~~~~~l~~~~~~L~p-gG~lv~~~~~~ 163 (233)
T 2gpy_A 133 DAAKG-----QYRRFFDMYSPMVRP-GGLILSDNVLF 163 (233)
T ss_dssp EGGGS-----CHHHHHHHHGGGEEE-EEEEEEETTTC
T ss_pred CCCHH-----HHHHHHHHHHHHcCC-CeEEEEEcCCc
Confidence 77654 345889999999999 99998865443
No 178
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.13 E-value=1.7e-10 Score=99.24 Aligned_cols=95 Identities=8% Similarity=0.049 Sum_probs=76.2
Q ss_pred CceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------C-CCeEEeecCCCC---CC--CcceEEEec
Q 018565 190 IETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------C-HGVEHVGGDMFD---GV--PEADAAIIK 254 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~-~~v~~~~~d~~~---~~--~~~D~i~~~ 254 (354)
..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ . ++++++.+|..+ .. .+||+|++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 34999999999999999999875 789999999 888888765 3 589999999866 23 359999886
Q ss_pred cccccCChHHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 255 WVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 255 ~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
... .....+++++.+.||| ||.+++.+...
T Consensus 137 ~~~-----~~~~~~l~~~~~~Lkp-GG~lv~dn~~~ 166 (221)
T 3dr5_A 137 VSP-----MDLKALVDAAWPLLRR-GGALVLADALL 166 (221)
T ss_dssp CCT-----TTHHHHHHHHHHHEEE-EEEEEETTTTG
T ss_pred CcH-----HHHHHHHHHHHHHcCC-CcEEEEeCCCC
Confidence 532 3345789999999999 99888755443
No 179
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.13 E-value=1.4e-10 Score=102.65 Aligned_cols=92 Identities=20% Similarity=0.226 Sum_probs=77.9
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCC-CCC--cceEEEeccccccCCh
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-GVP--EADAAIIKWVLHDWGD 262 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~~~ 262 (354)
.+..+|||||||+|.++..+++..|+.+++++|+ +.+++.+++ ..++.+..+|+.+ +++ +||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 3568999999999999999999888889999999 888888876 5778999999887 544 49999986553
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 263 DECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 263 ~~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
..++++.++||| ||++++..+.
T Consensus 159 ----~~l~~~~~~L~p-gG~l~~~~~~ 180 (269)
T 1p91_A 159 ----CKAEELARVVKP-GGWVITATPG 180 (269)
T ss_dssp ----CCHHHHHHHEEE-EEEEEEEEEC
T ss_pred ----hhHHHHHHhcCC-CcEEEEEEcC
Confidence 248899999999 9999998754
No 180
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.13 E-value=2.4e-10 Score=96.54 Aligned_cols=95 Identities=16% Similarity=0.181 Sum_probs=74.0
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCC--CCeEEEeechHHhhhcccCCCeEEeecCCCC-C-------------------
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFP--RIRGINFDLPHVVCVAEKCHGVEHVGGDMFD-G------------------- 244 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p--~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~------------------- 244 (354)
+.+..+|||+|||+|.++..+++++| +.+++++|+.++. ...++++..+|+.+ +
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----CCTTCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----CCCCceEEEccccchhhhhhccccccccccchhhH
Confidence 35678999999999999999999988 6899999994431 23679999999987 4
Q ss_pred ------CC--cceEEEeccccccCC----hHH-----HHHHHHHHHHhcCCCCceEEEE
Q 018565 245 ------VP--EADAAIIKWVLHDWG----DDE-----CIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 245 ------~~--~~D~i~~~~~lh~~~----~~~-----~~~~L~~~~~~L~p~gG~lli~ 286 (354)
++ .||+|++...+|... +.. ..++++++.++||| ||.+++.
T Consensus 96 ~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp-gG~lv~~ 153 (201)
T 2plw_A 96 YKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINI-GGTYIVK 153 (201)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEE
T ss_pred HHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC-CCEEEEE
Confidence 23 499999987776532 111 13489999999999 9998874
No 181
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.10 E-value=3.7e-10 Score=103.06 Aligned_cols=96 Identities=16% Similarity=0.200 Sum_probs=75.8
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCC-CCC--cceEEEecccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFD-GVP--EADAAIIKWVL 257 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~-~~~--~~D~i~~~~~l 257 (354)
.+..+|||||||+|.++..+++. +..+++++|..++++.+++ .++++++.+|+.+ +.+ .||+|++..+.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred cCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 35679999999999999988886 4568999999657776654 3679999999988 555 49999988655
Q ss_pred ccCC-hHHHHHHHHHHHHhcCCCCceEEE
Q 018565 258 HDWG-DDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 258 h~~~-~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
+.+. ......+++.+.++||| ||.++.
T Consensus 116 ~~l~~~~~~~~~l~~~~~~Lkp-gG~li~ 143 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVE-GGLIFP 143 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEE-EEEEES
T ss_pred hhcccHHHHHHHHHHHHhhcCC-CeEEEE
Confidence 5432 33456889999999999 998874
No 182
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.10 E-value=1.6e-10 Score=103.66 Aligned_cols=99 Identities=17% Similarity=0.149 Sum_probs=74.9
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----------CCCeEEeecCCCCC--C--CcceEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----------CHGVEHVGGDMFDG--V--PEADAA 251 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~--~--~~~D~i 251 (354)
.++.+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|..+. . ..||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 3568999999999999999999877889999999 888887764 35899999998873 2 249999
Q ss_pred EeccccccCChHHH--HHHHHHHHHhcCCCCceEEEEe
Q 018565 252 IIKWVLHDWGDDEC--IKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 252 ~~~~~lh~~~~~~~--~~~L~~~~~~L~p~gG~lli~e 287 (354)
++....+.-+.... .++++.++++|+| ||.+++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~Lkp-gG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNP-GGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEE-EEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCC-CCEEEEec
Confidence 99654433222222 6799999999999 99888754
No 183
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.09 E-value=4.4e-10 Score=97.80 Aligned_cols=97 Identities=14% Similarity=0.162 Sum_probs=78.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC--C-C----------
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD--G-V---------- 245 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~--~-~---------- 245 (354)
.+..+|||||||+|..+..+++.+| ..+++++|. +.+++.+++ .+++++..+|+.+ + .
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 4568999999999999999999987 789999999 888887764 2469999999865 2 1
Q ss_pred -------CcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 246 -------PEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 246 -------~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
.+||+|++... .+....+++++.+.|+| ||.+++.+...
T Consensus 139 ~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~p-gG~lv~~~~~~ 184 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLKP-GGLLIADNVLW 184 (239)
T ss_dssp TTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEEE-EEEEEEECSSG
T ss_pred ccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcCC-CeEEEEEcccc
Confidence 45999998743 33456889999999999 99998866444
No 184
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.09 E-value=9e-11 Score=96.28 Aligned_cols=93 Identities=9% Similarity=-0.026 Sum_probs=72.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCCCC-------CcceEEEecc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFDGV-------PEADAAIIKW 255 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~-------~~~D~i~~~~ 255 (354)
+..+|||+|||+|.++..+++..+. ++++|+ +.+++.+++ ..++++..+|+.+.. ..||+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 5679999999999999999998665 999999 888888775 228999999987621 1599999988
Q ss_pred ccccCChHHHHHHHHHHH--HhcCCCCceEEEEee
Q 018565 256 VLHDWGDDECIKILKNCK--EAITKDKGKVIIVEA 288 (354)
Q Consensus 256 ~lh~~~~~~~~~~L~~~~--~~L~p~gG~lli~e~ 288 (354)
++| -..+ ++++.+. ++|+| ||.+++...
T Consensus 119 ~~~-~~~~---~~~~~~~~~~~L~~-gG~~~~~~~ 148 (171)
T 1ws6_A 119 PYA-MDLA---ALFGELLASGLVEA-GGLYVLQHP 148 (171)
T ss_dssp CTT-SCTT---HHHHHHHHHTCEEE-EEEEEEEEE
T ss_pred CCc-hhHH---HHHHHHHhhcccCC-CcEEEEEeC
Confidence 776 2222 3444454 99999 998887554
No 185
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.08 E-value=1.9e-10 Score=100.60 Aligned_cols=94 Identities=17% Similarity=0.261 Sum_probs=73.6
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--------------CCCeEEeecCCCC--C--CC-
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--------------CHGVEHVGGDMFD--G--VP- 246 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------------~~~v~~~~~d~~~--~--~~- 246 (354)
..+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..+++++.+|+.+ + ++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 34678999999999999999999999999999999 777776532 2579999999886 2 32
Q ss_pred -cceEEEeccccccCChHHH-----------HHHHHHHHHhcCCCCceEEEE
Q 018565 247 -EADAAIIKWVLHDWGDDEC-----------IKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 247 -~~D~i~~~~~lh~~~~~~~-----------~~~L~~~~~~L~p~gG~lli~ 286 (354)
.+|.|++. ++++.. ..+++++.++|+| ||.+++.
T Consensus 127 ~~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkp-gG~l~~~ 172 (246)
T 2vdv_E 127 GQLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKE-GGVVYTI 172 (246)
T ss_dssp TCEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEE-EEEEEEE
T ss_pred cccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCC-CCEEEEE
Confidence 37777643 233211 4799999999999 9999885
No 186
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.08 E-value=4.9e-10 Score=101.63 Aligned_cols=102 Identities=15% Similarity=0.163 Sum_probs=78.3
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-C-CC-cceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-G-VP-EADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~-~~-~~D~i~~~~ 255 (354)
..++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+++++.+|+.+ + .+ .||+|++.-
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 45678999999999999999999875 478999999 888877764 3579999999987 3 23 599999832
Q ss_pred ------cccc-------CChHH-------HHHHHHHHHHhcCCCCceEEEEeee
Q 018565 256 ------VLHD-------WGDDE-------CIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 256 ------~lh~-------~~~~~-------~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
+++. |+.+. -.++|+++.+.||| ||++++....
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp-GG~lv~stcs 248 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP-GGILVYSTCS 248 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEESC
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 2332 22222 15899999999999 9999886643
No 187
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.08 E-value=1.3e-10 Score=99.12 Aligned_cols=96 Identities=19% Similarity=0.149 Sum_probs=77.0
Q ss_pred CCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC--CC-CcceEEEeccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD--GV-PEADAAIIKWV 256 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~--~~-~~~D~i~~~~~ 256 (354)
+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ .++++++.+|..+ +. ++||+|++...
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 135 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDCD 135 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEETT
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcCC
Confidence 467999999999999999999887 889999999 888887764 3579999999865 32 12999988632
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 257 LHDWGDDECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
......+++++.+.|+| ||.+++.+...
T Consensus 136 -----~~~~~~~l~~~~~~Lkp-gG~lv~~~~~~ 163 (210)
T 3c3p_A 136 -----VFNGADVLERMNRCLAK-NALLIAVNALR 163 (210)
T ss_dssp -----TSCHHHHHHHHGGGEEE-EEEEEEESSSS
T ss_pred -----hhhhHHHHHHHHHhcCC-CeEEEEECccc
Confidence 23456889999999999 99888755443
No 188
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.07 E-value=1.3e-10 Score=100.32 Aligned_cols=97 Identities=13% Similarity=0.234 Sum_probs=78.6
Q ss_pred CCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCC---C------Ccce
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDG---V------PEAD 249 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~---~------~~~D 249 (354)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ .++++++.+|+.+. . ..||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 4568999999999999999999877 789999999 888887764 36899999998651 1 4699
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 250 AAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 250 ~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
+|++... ......+++++.+.|+| ||.+++.+...
T Consensus 148 ~v~~d~~-----~~~~~~~l~~~~~~L~p-gG~lv~~~~~~ 182 (229)
T 2avd_A 148 VAVVDAD-----KENCSAYYERCLQLLRP-GGILAVLRVLW 182 (229)
T ss_dssp EEEECSC-----STTHHHHHHHHHHHEEE-EEEEEEECCSG
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCC-CeEEEEECCCc
Confidence 9998543 33456889999999999 99888866543
No 189
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.06 E-value=2.4e-10 Score=95.26 Aligned_cols=96 Identities=9% Similarity=-0.024 Sum_probs=74.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCC-------CCcceEEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDG-------VPEADAAI 252 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~-------~~~~D~i~ 252 (354)
.+..+|||+|||+|.++..+++ .+..+++++|+ +.+++.+++ .++++++.+|+.+. ...||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 3567999999999999998887 45679999999 888888765 25799999998772 23599999
Q ss_pred eccccccCChHHHHHHHHHH--HHhcCCCCceEEEEee
Q 018565 253 IKWVLHDWGDDECIKILKNC--KEAITKDKGKVIIVEA 288 (354)
Q Consensus 253 ~~~~lh~~~~~~~~~~L~~~--~~~L~p~gG~lli~e~ 288 (354)
+...+|.... ..+++.+ .++|+| ||.+++...
T Consensus 122 ~~~~~~~~~~---~~~~~~l~~~~~L~~-gG~l~~~~~ 155 (187)
T 2fhp_A 122 LDPPYAKQEI---VSQLEKMLERQLLTN-EAVIVCETD 155 (187)
T ss_dssp ECCCGGGCCH---HHHHHHHHHTTCEEE-EEEEEEEEE
T ss_pred ECCCCCchhH---HHHHHHHHHhcccCC-CCEEEEEeC
Confidence 9877553233 3455555 788999 998887644
No 190
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.06 E-value=2.9e-10 Score=94.01 Aligned_cols=97 Identities=4% Similarity=-0.020 Sum_probs=75.9
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC--C-C-CcceEEEecc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD--G-V-PEADAAIIKW 255 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~--~-~-~~~D~i~~~~ 255 (354)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+.+ + . ..||+|++..
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 35679999999999999999887 6679999999 888888765 2479999999877 2 2 3599999986
Q ss_pred ccccCChHHHHHHHHHHH--HhcCCCCceEEEEeee
Q 018565 256 VLHDWGDDECIKILKNCK--EAITKDKGKVIIVEAI 289 (354)
Q Consensus 256 ~lh~~~~~~~~~~L~~~~--~~L~p~gG~lli~e~~ 289 (354)
.+|. ....++++.+. ++|+| ||.+++....
T Consensus 109 ~~~~---~~~~~~~~~l~~~~~L~~-gG~l~~~~~~ 140 (177)
T 2esr_A 109 PYAK---ETIVATIEALAAKNLLSE-QVMVVCETDK 140 (177)
T ss_dssp SSHH---HHHHHHHHHHHHTTCEEE-EEEEEEEEET
T ss_pred CCCc---chHHHHHHHHHhCCCcCC-CcEEEEEECC
Confidence 6542 33456677776 89999 9988886543
No 191
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.05 E-value=2.8e-10 Score=99.65 Aligned_cols=97 Identities=13% Similarity=0.128 Sum_probs=78.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC--C--------CCcc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD--G--------VPEA 248 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~--~--------~~~~ 248 (354)
.+..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ .++++++.+|..+ + ...|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3567999999999999999999987 789999999 888887764 3589999999865 2 2359
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
|+|++... ......+++.+.+.|+| ||.+++-+...
T Consensus 158 D~V~~d~~-----~~~~~~~l~~~~~~Lkp-GG~lv~d~~~~ 193 (247)
T 1sui_A 158 DFIFVDAD-----KDNYLNYHKRLIDLVKV-GGVIGYDNTLW 193 (247)
T ss_dssp SEEEECSC-----STTHHHHHHHHHHHBCT-TCCEEEECTTG
T ss_pred EEEEEcCc-----hHHHHHHHHHHHHhCCC-CeEEEEecCCc
Confidence 99998643 23456889999999999 99888765443
No 192
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.05 E-value=9.4e-10 Score=94.79 Aligned_cols=93 Identities=12% Similarity=0.122 Sum_probs=76.7
Q ss_pred cCCCceEEEecCCccHHHHHHHHHC-----CCCeEEEeec-hHHhhhccc-----------CCCeEEeecCCCCCC----
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAF-----PRIRGINFDL-PHVVCVAEK-----------CHGVEHVGGDMFDGV---- 245 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~-----p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~---- 245 (354)
..+..+|||||||+|.++..+++.. |..+++++|+ +.+++.+++ ..+++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4567899999999999999999986 5779999999 888877764 257999999998743
Q ss_pred ---CcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 246 ---PEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 246 ---~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.+||+|++...+|++ ++++.+.|+| ||++++.-.
T Consensus 158 ~~~~~fD~I~~~~~~~~~--------~~~~~~~Lkp-gG~lv~~~~ 194 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL--------PEILVDLLAE-NGKLIIPIE 194 (227)
T ss_dssp HHHCCEEEEEECSBBSSC--------CHHHHHHEEE-EEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH--------HHHHHHhcCC-CcEEEEEEc
Confidence 249999999988864 4677889999 999988654
No 193
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.04 E-value=2.1e-10 Score=97.20 Aligned_cols=97 Identities=10% Similarity=0.042 Sum_probs=75.6
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------C--CCeEEeecCCCC-C-C---Cc-ceEEEe
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------C--HGVEHVGGDMFD-G-V---PE-ADAAII 253 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~--~~v~~~~~d~~~-~-~---~~-~D~i~~ 253 (354)
+..+|||+|||+|.++..++++.. .+++++|+ +.+++.+++ . ++++++.+|+.+ . . .. ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 457999999999999998777643 58999999 889888775 2 689999999876 2 1 36 999999
Q ss_pred ccccccCChHHHHHHHHHH--HHhcCCCCceEEEEeeee
Q 018565 254 KWVLHDWGDDECIKILKNC--KEAITKDKGKVIIVEAII 290 (354)
Q Consensus 254 ~~~lh~~~~~~~~~~L~~~--~~~L~p~gG~lli~e~~~ 290 (354)
...+| . ....++++.+ .++|+| ||.+++.....
T Consensus 132 ~~~~~-~--~~~~~~l~~~~~~~~Lkp-gG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPPFH-F--NLAEQAISLLCENNWLKP-NALIYVETEKD 166 (201)
T ss_dssp CCCSS-S--CHHHHHHHHHHHTTCEEE-EEEEEEEEESS
T ss_pred CCCCC-C--ccHHHHHHHHHhcCccCC-CcEEEEEECCC
Confidence 87755 2 3455788888 567999 99988865443
No 194
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.04 E-value=2.3e-10 Score=105.23 Aligned_cols=94 Identities=17% Similarity=0.105 Sum_probs=75.3
Q ss_pred CCceEEEecCC------ccHHHHHHHHH-CCCCeEEEeec-hHHhhhcccCCCeEEeecCCCC-CC--------CcceEE
Q 018565 189 GIETLVDIGGN------DGTTLRTLTKA-FPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFD-GV--------PEADAA 251 (354)
Q Consensus 189 ~~~~vLDvG~G------~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~--------~~~D~i 251 (354)
+..+||||||| +|..+..++++ +|+.+++++|+ +.+. ...++++++.+|+.+ ++ .+||+|
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlV 292 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---VDELRIRTIQGDQNDAEFLDRIARRYGPFDIV 292 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---hcCCCcEEEEecccccchhhhhhcccCCccEE
Confidence 46899999999 77777777765 69999999999 6663 235789999999988 43 359999
Q ss_pred EeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 252 IIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 252 ~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
++. ..|++ .+..+.|++++++||| ||.+++.|..
T Consensus 293 isd-gsH~~--~d~~~aL~el~rvLKP-GGvlVi~Dl~ 326 (419)
T 3sso_A 293 IDD-GSHIN--AHVRTSFAALFPHVRP-GGLYVIEDMW 326 (419)
T ss_dssp EEC-SCCCH--HHHHHHHHHHGGGEEE-EEEEEEECGG
T ss_pred EEC-Ccccc--hhHHHHHHHHHHhcCC-CeEEEEEecc
Confidence 876 45664 3457899999999999 9999988765
No 195
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.04 E-value=3.7e-10 Score=97.44 Aligned_cols=92 Identities=15% Similarity=0.189 Sum_probs=75.7
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCC------CCeEEEeec-hHHhhhccc-----------CCCeEEeecCCCCCCC--
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFP------RIRGINFDL-PHVVCVAEK-----------CHGVEHVGGDMFDGVP-- 246 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p------~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~~-- 246 (354)
..+..+|||||||+|.++..+++..+ ..+++++|+ +++++.+++ ..++++..+|..++++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 45678999999999999999998654 368999999 888887764 2589999999987543
Q ss_pred -cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 247 -EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 247 -~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
+||+|++...+|+++ +++.+.||| ||++++.-
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~Lkp-gG~lvi~~ 194 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLAS-GGRLIVPV 194 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEEE-EEEEEEEE
T ss_pred CCccEEEECCchHHHH--------HHHHHHhcC-CCEEEEEE
Confidence 499999999998765 567889999 99998864
No 196
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.02 E-value=4.3e-10 Score=100.55 Aligned_cols=102 Identities=16% Similarity=0.278 Sum_probs=77.8
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCCc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVPE 247 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~~ 247 (354)
..+++.++ ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|+.+ +.+.
T Consensus 18 ~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~ 93 (285)
T 1zq9_A 18 NSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPF 93 (285)
T ss_dssp HHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCC
T ss_pred HHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchh
Confidence 45555555 5677899999999999999999984 48999999 888887764 1579999999998 7778
Q ss_pred ceEEEeccccccCChHHHHHHHHH--------------H--HHhcCCCCceEE
Q 018565 248 ADAAIIKWVLHDWGDDECIKILKN--------------C--KEAITKDKGKVI 284 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L~~--------------~--~~~L~p~gG~ll 284 (354)
||+|+++ ..++|..+...++|.. + +.+++| ||+++
T Consensus 94 fD~vv~n-lpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkP-Gg~~y 144 (285)
T 1zq9_A 94 FDTCVAN-LPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKP-GDKLY 144 (285)
T ss_dssp CSEEEEE-CCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCT-TCTTC
T ss_pred hcEEEEe-cCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCC-CCccc
Confidence 9998884 4445666555566542 2 468999 99653
No 197
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.02 E-value=9.6e-10 Score=97.02 Aligned_cols=97 Identities=12% Similarity=0.031 Sum_probs=71.7
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc--CC------CeEEe--ecCCCC-CCCcceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK--CH------GVEHV--GGDMFD-GVPEADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~--~~------~v~~~--~~d~~~-~~~~~D~i~~~~ 255 (354)
+.+..+|||+|||+|.++..+++. .+++++|+..+...+++ .. ++.++ .+|+.+ +...||+|++..
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~ 148 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDV 148 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeC
Confidence 457789999999999999998886 68999999446433322 12 68988 899987 534599999976
Q ss_pred ccccCChH-----HHHHHHHHHHHhcCCCCc--eEEEEee
Q 018565 256 VLHDWGDD-----ECIKILKNCKEAITKDKG--KVIIVEA 288 (354)
Q Consensus 256 ~lh~~~~~-----~~~~~L~~~~~~L~p~gG--~lli~e~ 288 (354)
. +..+.. ....+|+.+.++|+| || .+++-.+
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~Lkp-GG~~~fv~kv~ 186 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVK-NPSADFVVKVL 186 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEES
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhcc-CCCeEEEEEeC
Confidence 6 433221 122489999999999 99 8877443
No 198
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.02 E-value=2e-09 Score=92.03 Aligned_cols=95 Identities=9% Similarity=-0.018 Sum_probs=78.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-CCC-cceEEEecccccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-GVP-EADAAIIKWVLHD 259 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~~-~~D~i~~~~~lh~ 259 (354)
..+.+|||||||+|-++..+. |..+++++|+ +.+++.++. ..+.++...|... +.+ +||++++.-++|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 567899999999999998877 8999999999 888888775 6778899999998 444 4999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
+.+.+....+ ++.+.|++ + +++|+=+
T Consensus 181 LE~q~~~~~~-~ll~aL~~-~-~vvVsfP 206 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNT-P-RMAVSFP 206 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBC-S-EEEEEEE
T ss_pred hhhhchhhHH-HHHHHhcC-C-CEEEEcC
Confidence 8777666656 88889998 5 4555433
No 199
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.02 E-value=1.4e-09 Score=100.28 Aligned_cols=109 Identities=14% Similarity=0.075 Sum_probs=84.0
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CC-
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GV- 245 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~- 245 (354)
+..++.... ..+..+|||+|||+|.++..++... |+.+++++|+ +.+++.++. .+++++..+|+.+ +.
T Consensus 192 a~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 192 AQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF 269 (354)
T ss_dssp HHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT
T ss_pred HHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc
Confidence 344445455 5677899999999999999999987 8899999999 889888775 2389999999988 43
Q ss_pred -CcceEEEeccccccCCh--H----HHHHHHHHHHHhcCCCCceEEEEe
Q 018565 246 -PEADAAIIKWVLHDWGD--D----ECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 246 -~~~D~i~~~~~lh~~~~--~----~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
+.||+|+++-..+.... . ....+++.+.+.|+| ||+++++.
T Consensus 270 ~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkp-gG~l~i~t 317 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPP-GGRVALLT 317 (354)
T ss_dssp CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCT-TCEEEEEE
T ss_pred cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCC-CcEEEEEe
Confidence 35899999655432111 1 136889999999999 99999854
No 200
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.02 E-value=8e-10 Score=98.40 Aligned_cols=102 Identities=17% Similarity=0.207 Sum_probs=81.1
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHhhhccc---------CCCeEEeecCCCC-C
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKA-FPRIRGINFDL-PHVVCVAEK---------CHGVEHVGGDMFD-G 244 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~ 244 (354)
..++..++ ..+..+|||+|||+|.++..+++. .|..+++++|+ +.+++.+++ .+++++..+|+.+ +
T Consensus 89 ~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 89 AQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 34555556 667889999999999999999985 57889999999 888877654 2589999999987 4
Q ss_pred CC--cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 245 VP--EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 245 ~~--~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
++ .||+|++. .++. .++++++.++|+| ||.+++...
T Consensus 167 ~~~~~~D~v~~~-----~~~~--~~~l~~~~~~L~p-gG~l~~~~~ 204 (280)
T 1i9g_A 167 LPDGSVDRAVLD-----MLAP--WEVLDAVSRLLVA-GGVLMVYVA 204 (280)
T ss_dssp CCTTCEEEEEEE-----SSCG--GGGHHHHHHHEEE-EEEEEEEES
T ss_pred CCCCceeEEEEC-----CcCH--HHHHHHHHHhCCC-CCEEEEEeC
Confidence 43 49999982 2322 2679999999999 999998764
No 201
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.01 E-value=9.1e-10 Score=97.72 Aligned_cols=97 Identities=9% Similarity=-0.020 Sum_probs=71.8
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc--CC------CeEEe--ecCCCC-CCCcceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK--CH------GVEHV--GGDMFD-GVPEADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~--~~------~v~~~--~~d~~~-~~~~~D~i~~~~ 255 (354)
+.++.+|||+|||+|.++..++++ .+++++|+..+...+++ .. +++++ .+|+.+ +...||+|++..
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~ 156 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDI 156 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECC
Confidence 457789999999999999999887 58999999446443322 11 78999 899987 534599999976
Q ss_pred ccccCChH-----HHHHHHHHHHHhcCCCCc--eEEEEee
Q 018565 256 VLHDWGDD-----ECIKILKNCKEAITKDKG--KVIIVEA 288 (354)
Q Consensus 256 ~lh~~~~~-----~~~~~L~~~~~~L~p~gG--~lli~e~ 288 (354)
. +..+.. ....+|+.+.++||| || .+++..+
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~Lkp-GG~~~~v~~~~ 194 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEY-NQGCGFCVKVL 194 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHH-STTCEEEEEES
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhcc-CCCcEEEEEeC
Confidence 6 433221 122479999999999 99 8877443
No 202
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.01 E-value=1.5e-09 Score=91.10 Aligned_cols=102 Identities=16% Similarity=0.260 Sum_probs=74.1
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhcccCCCeEEeecCCCCCC------------
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFDGV------------ 245 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~------------ 245 (354)
++.+.+. .+.++.+|||+|||+|.++..++++ ..+++++|+.++ ....+++++.+|+.+..
T Consensus 15 ei~~~~~-~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 15 FLLDRYR-VVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp HHHHHHC-CSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHHHHHH
T ss_pred HHHHHcC-CCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc----ccCCCeEEEEccccCHHHHHHHHHHhhcc
Confidence 3444443 1457789999999999999999987 778999999432 12468999999998731
Q ss_pred --CcceEEEecccccc---CC------hHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 246 --PEADAAIIKWVLHD---WG------DDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 246 --~~~D~i~~~~~lh~---~~------~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
+.||+|++...... +. .+....+++.+.++||| ||.+++..
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lkp-GG~lv~k~ 139 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRN-GGNVLLKQ 139 (191)
T ss_dssp TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEE
T ss_pred cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC-CCEEEEEE
Confidence 36999998543211 11 12245789999999999 99988644
No 203
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.00 E-value=2.7e-09 Score=93.02 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=79.1
Q ss_pred HHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCC-C--
Q 018565 178 AIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGV-P-- 246 (354)
Q Consensus 178 ~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~-~-- 246 (354)
.++..++ ..+..+|||+|||+|.++..+++. ..+++++|+ +++++.+++ .+++++..+|+.+.. +
T Consensus 82 ~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 157 (248)
T 2yvl_A 82 YIALKLN--LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEG 157 (248)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTT
T ss_pred HHHHhcC--CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCC
Confidence 3444445 567789999999999999999998 679999999 888887764 268999999998854 3
Q ss_pred cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 247 EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 247 ~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.||+|++. .++. ..+++++.++|+| ||++++...
T Consensus 158 ~~D~v~~~-----~~~~--~~~l~~~~~~L~~-gG~l~~~~~ 191 (248)
T 2yvl_A 158 IFHAAFVD-----VREP--WHYLEKVHKSLME-GAPVGFLLP 191 (248)
T ss_dssp CBSEEEEC-----SSCG--GGGHHHHHHHBCT-TCEEEEEES
T ss_pred cccEEEEC-----CcCH--HHHHHHHHHHcCC-CCEEEEEeC
Confidence 49999973 2322 3679999999999 999998764
No 204
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.00 E-value=2.8e-11 Score=105.44 Aligned_cols=135 Identities=13% Similarity=0.115 Sum_probs=95.3
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----C--CCeEEeecCCCC-CC-CcceEEEeccccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----C--HGVEHVGGDMFD-GV-PEADAAIIKWVLH 258 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~--~~v~~~~~d~~~-~~-~~~D~i~~~~~lh 258 (354)
+..+|||+|||+|.++..+++. +.+++++|+ +.+++.++. . ++++++.+|+.+ +. ..||+|++..++|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 5689999999999999999987 479999999 888888765 2 589999999988 42 3599999999998
Q ss_pred cCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCcee
Q 018565 259 DWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFSRY 338 (354)
Q Consensus 259 ~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 338 (354)
+.++.. ..+.+++++|+| ||.+++ +........ ... .-.+....+++..++...|.-.+
T Consensus 156 ~~~~~~--~~~~~~~~~L~p-gG~~i~-~~~~~~~~~-------------~~~----~lp~~~~~~~~~~~l~~~g~~~i 214 (241)
T 3gdh_A 156 GPDYAT--AETFDIRTMMSP-DGFEIF-RLSKKITNN-------------IVY----FLPRNADIDQVASLAGPGGQVEI 214 (241)
T ss_dssp SGGGGG--SSSBCTTTSCSS-CHHHHH-HHHHHHCSC-------------EEE----EEETTBCHHHHHHTTCTTCCEEE
T ss_pred Ccchhh--hHHHHHHhhcCC-cceeHH-HHHHhhCCc-------------eEE----ECCCCCCHHHHHHHhccCCCEEE
Confidence 866543 367789999999 998544 221111000 000 00123356777777877776666
Q ss_pred EEEEcCCc
Q 018565 339 NITSIHAV 346 (354)
Q Consensus 339 ~~~~~~~~ 346 (354)
+.....+.
T Consensus 215 ~~~~~~~~ 222 (241)
T 3gdh_A 215 EQNFLNNK 222 (241)
T ss_dssp EEEEETTE
T ss_pred EehhhcCc
Confidence 55555443
No 205
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.00 E-value=1.8e-09 Score=92.99 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=75.6
Q ss_pred cCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhccc-----------CCCeEEeecCCCCCC---CcceE
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEK-----------CHGVEHVGGDMFDGV---PEADA 250 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~---~~~D~ 250 (354)
..+..+|||||||+|..+..+++.. |..+++++|+ +.+++.+++ ..+++++.+|..... .+||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 4467899999999999999999874 6679999999 888877653 248999999987632 25999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 251 AIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 251 i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
|++...++++. +++.+.||| ||.+++...
T Consensus 155 i~~~~~~~~~~--------~~~~~~Lkp-gG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAAAPVVP--------QALIDQLKP-GGRLILPVG 183 (226)
T ss_dssp EEECSBBSSCC--------HHHHHTEEE-EEEEEEEES
T ss_pred EEECCchHHHH--------HHHHHhcCC-CcEEEEEEe
Confidence 99998887654 577889999 999988653
No 206
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.99 E-value=6.5e-10 Score=96.65 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=77.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC--C--------CCcc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD--G--------VPEA 248 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~--~--------~~~~ 248 (354)
.+..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ .++++++.+|..+ + ...|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 3567999999999999999999987 789999999 888887764 3579999999875 2 2359
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
|+|++.. +......+++++.+.|+| ||.+++-+..
T Consensus 149 D~I~~d~-----~~~~~~~~l~~~~~~L~p-GG~lv~d~~~ 183 (237)
T 3c3y_A 149 DFGFVDA-----DKPNYIKYHERLMKLVKV-GGIVAYDNTL 183 (237)
T ss_dssp EEEEECS-----CGGGHHHHHHHHHHHEEE-EEEEEEECTT
T ss_pred CEEEECC-----chHHHHHHHHHHHHhcCC-CeEEEEecCC
Confidence 9999753 234567899999999999 9887765443
No 207
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.98 E-value=6.9e-10 Score=99.10 Aligned_cols=98 Identities=15% Similarity=0.074 Sum_probs=77.9
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCCC----CCcceEEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFDG----VPEADAAI 252 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~----~~~~D~i~ 252 (354)
.++.+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|..+. ...||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 3568999999999999999998878889999999 888887764 36899999998762 23599999
Q ss_pred eccccccCChHHH--HHHHHHHHHhcCCCCceEEEE
Q 018565 253 IKWVLHDWGDDEC--IKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 253 ~~~~lh~~~~~~~--~~~L~~~~~~L~p~gG~lli~ 286 (354)
+....+..+.... .+++++++++|+| ||.+++.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~p-gG~lv~~ 191 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKP-NGYCVAQ 191 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEE-EEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCC-CcEEEEE
Confidence 8654443223222 5899999999999 9988875
No 208
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.98 E-value=4.3e-10 Score=97.49 Aligned_cols=97 Identities=18% Similarity=0.241 Sum_probs=78.0
Q ss_pred CCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC--C---C----CcceE
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD--G---V----PEADA 250 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~--~---~----~~~D~ 250 (354)
+..+|||||||+|..+..+++..| +.+++++|+ +++++.+++ .+++++..+|..+ + . ..||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 467999999999999999999887 789999999 888887764 3579999999754 1 1 45999
Q ss_pred EEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeC
Q 018565 251 AIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIE 291 (354)
Q Consensus 251 i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~ 291 (354)
|++... ......+++++.+.|+| ||.+++.+...+
T Consensus 152 V~~d~~-----~~~~~~~l~~~~~~Lkp-gG~lv~~~~~~~ 186 (232)
T 3cbg_A 152 IFIDAD-----KRNYPRYYEIGLNLLRR-GGLMVIDNVLWH 186 (232)
T ss_dssp EEECSC-----GGGHHHHHHHHHHTEEE-EEEEEEECTTGG
T ss_pred EEECCC-----HHHHHHHHHHHHHHcCC-CeEEEEeCCCcC
Confidence 997643 34456889999999999 998888665443
No 209
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.98 E-value=1.1e-09 Score=98.69 Aligned_cols=95 Identities=12% Similarity=0.030 Sum_probs=69.8
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-----hHHhhhcc--c--CCCeEEeec-CCCC-CCCcceEEEecc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-----PHVVCVAE--K--CHGVEHVGG-DMFD-GVPEADAAIIKW 255 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~--~--~~~v~~~~~-d~~~-~~~~~D~i~~~~ 255 (354)
+.++.+|||||||+|.++..++++ .+++++|+ +..++... . .++++++.+ |+.+ +..+||+|++..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 456789999999999999999887 47899997 43333221 1 267999999 9887 555699999976
Q ss_pred ccc---cCChHH-HHHHHHHHHHhcCCCCceEEE
Q 018565 256 VLH---DWGDDE-CIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 256 ~lh---~~~~~~-~~~~L~~~~~~L~p~gG~lli 285 (354)
.++ ...+.. ...+|+.++++||| ||.+++
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~Lkp-GG~~v~ 189 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSN-NTQFCV 189 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCT-TCEEEE
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCC-CCEEEE
Confidence 553 212221 22689999999999 997776
No 210
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.98 E-value=9.6e-10 Score=93.14 Aligned_cols=96 Identities=5% Similarity=0.002 Sum_probs=74.0
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC--CC--CcceEEEecccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD--GV--PEADAAIIKWVL 257 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~--~~--~~~D~i~~~~~l 257 (354)
+..+|||+|||+|.++..++++.. .+++++|+ +.+++.+++ .++++++.+|+.+ +. ..||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 457999999999999998887643 48999999 899888875 2589999999876 32 249999998775
Q ss_pred ccCChHHHHHHHHHHHH--hcCCCCceEEEEeee
Q 018565 258 HDWGDDECIKILKNCKE--AITKDKGKVIIVEAI 289 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~--~L~p~gG~lli~e~~ 289 (354)
| . .....+++.+.+ +|+| ||.+++....
T Consensus 133 ~-~--~~~~~~l~~l~~~~~L~p-gG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-R--GLLEETINLLEDNGWLAD-EALIYVESEV 162 (202)
T ss_dssp S-T--TTHHHHHHHHHHTTCEEE-EEEEEEEEEG
T ss_pred C-C--CcHHHHHHHHHhcCccCC-CcEEEEEECC
Confidence 5 2 234467777766 4999 9988876543
No 211
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.98 E-value=3.1e-09 Score=98.05 Aligned_cols=95 Identities=16% Similarity=0.170 Sum_probs=72.0
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc-------CCCeEEeecCCCC-CCC-cceEEEecccccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK-------CHGVEHVGGDMFD-GVP-EADAAIIKWVLHD 259 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-------~~~v~~~~~d~~~-~~~-~~D~i~~~~~lh~ 259 (354)
++.+|||||||+|.++...++.. ..+++++|..+++..|++ .++|+++.+|+.+ +.| .+|+|++..+-+.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 45799999999999988777653 347999998657666654 5789999999988 666 4999988544333
Q ss_pred CC-hHHHHHHHHHHHHhcCCCCceEEE
Q 018565 260 WG-DDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 260 ~~-~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
+. ......++....+.||| ||.++-
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp-~G~~iP 187 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKE-GGLLLP 187 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEE-EEEEES
T ss_pred ccccchhhhHHHHHHhhCCC-CceECC
Confidence 32 33566788888899999 887764
No 212
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.98 E-value=6e-10 Score=99.06 Aligned_cols=97 Identities=16% Similarity=0.155 Sum_probs=76.3
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCC--C--CCcceEEEe
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFD--G--VPEADAAII 253 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~--~--~~~~D~i~~ 253 (354)
++.+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .+|++++.+|..+ + ...||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 468999999999999999998767789999999 888887764 3689999999876 2 235999999
Q ss_pred ccccccCChHH--HHHHHHHHHHhcCCCCceEEEE
Q 018565 254 KWVLHDWGDDE--CIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 254 ~~~lh~~~~~~--~~~~L~~~~~~L~p~gG~lli~ 286 (354)
....+..+... ..+++++++++|+| ||.+++.
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~p-gG~lv~~ 188 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKE-DGIFVAQ 188 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEE-EEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCC-CcEEEEE
Confidence 65443322111 24789999999999 9988774
No 213
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.97 E-value=1.8e-09 Score=90.68 Aligned_cols=97 Identities=16% Similarity=0.236 Sum_probs=72.8
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCC---------CeEEEeechHHhhhcccCCCeEEe-ecCCCC-C--------CC-
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPR---------IRGINFDLPHVVCVAEKCHGVEHV-GGDMFD-G--------VP- 246 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~---------~~~~~~D~~~~~~~a~~~~~v~~~-~~d~~~-~--------~~- 246 (354)
+.+..+|||+|||+|.++..++++++. .+++++|+.++. ...++++. .+|+.+ + .+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----PLEGATFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----CCTTCEEECSCCTTSHHHHHHHHHHSGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----cCCCCeEEEeccCCCHHHHHHHHHhcCC
Confidence 356789999999999999999999765 789999994421 13568889 899876 2 22
Q ss_pred -cceEEEeccccccC----ChHH-----HHHHHHHHHHhcCCCCceEEEEee
Q 018565 247 -EADAAIIKWVLHDW----GDDE-----CIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 247 -~~D~i~~~~~lh~~----~~~~-----~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.||+|++...+|.. .+.. ...+++++.++||| ||++++...
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~lv~~~~ 146 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQP-GGTFLCKTW 146 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEEC
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcC-CCEEEEEec
Confidence 59999986544421 1111 14789999999999 999988654
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.97 E-value=9e-10 Score=99.84 Aligned_cols=98 Identities=18% Similarity=0.155 Sum_probs=78.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----------CCCeEEeecCCCC--C--CCcceEEE
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----------CHGVEHVGGDMFD--G--VPEADAAI 252 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~--~--~~~~D~i~ 252 (354)
++.+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|..+ + ...||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 458999999999999999999878889999999 888877653 3689999999876 2 23599999
Q ss_pred ecccccc---CChHH--HHHHHHHHHHhcCCCCceEEEEe
Q 018565 253 IKWVLHD---WGDDE--CIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 253 ~~~~lh~---~~~~~--~~~~L~~~~~~L~p~gG~lli~e 287 (354)
+....|. -+... ..+++++++++|+| ||.+++..
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~~ 195 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNP-GGVMGMQT 195 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEE-EEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCC-CcEEEEEc
Confidence 9766553 11111 36889999999999 99988864
No 215
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.96 E-value=7.9e-10 Score=98.61 Aligned_cols=96 Identities=18% Similarity=0.160 Sum_probs=74.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------------CCCeEEeecCCCCC---CCcc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------------CHGVEHVGGDMFDG---VPEA 248 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------------~~~v~~~~~d~~~~---~~~~ 248 (354)
.+.+|||||||+|..+..+++. |..+++++|+ +.+++.+++ .++++++.+|..+. ...|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 4689999999999999999998 8889999999 888876652 36799999997652 2359
Q ss_pred eEEEeccccccCChHH--HHHHHHHHHHhcCCCCceEEEE
Q 018565 249 DAAIIKWVLHDWGDDE--CIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~--~~~~L~~~~~~L~p~gG~lli~ 286 (354)
|+|++....+.-+... ..+++++++++|+| ||.+++.
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~p-gG~lv~~ 192 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNN-PGIYVTQ 192 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEE-EEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCC-CcEEEEE
Confidence 9999866543222222 26789999999999 9988775
No 216
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.96 E-value=1.1e-09 Score=97.17 Aligned_cols=99 Identities=20% Similarity=0.137 Sum_probs=81.2
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCC-C-CcceEEEecccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDG-V-PEADAAIIKWVL 257 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~-~-~~~D~i~~~~~l 257 (354)
+.+..+|||+|||+|.++..+++..+..+++++|+ +.+++.+++ ..+++++.+|+.+. . ..||+|++....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 45678999999999999999999988889999999 888888765 35789999999874 3 249999987543
Q ss_pred ccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCC
Q 018565 258 HDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEE 292 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~ 292 (354)
...++++.+.+.|+| ||.+++.+....+
T Consensus 197 ------~~~~~l~~~~~~Lkp-gG~l~~s~~~~~~ 224 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKD-RGVIHYHETVAEK 224 (272)
T ss_dssp ------SGGGGHHHHHHHEEE-EEEEEEEEEEEGG
T ss_pred ------cHHHHHHHHHHHcCC-CCEEEEEEcCccc
Confidence 234678999999999 9999988776543
No 217
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.95 E-value=9.2e-10 Score=100.39 Aligned_cols=98 Identities=21% Similarity=0.158 Sum_probs=76.8
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCC---CC--CcceEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFD---GV--PEADAA 251 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~--~~~D~i 251 (354)
....+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|..+ .. ..||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 3568999999999999999999878889999999 888887764 3689999999865 22 359999
Q ss_pred EeccccccCChHH--HHHHHHHHHHhcCCCCceEEEE
Q 018565 252 IIKWVLHDWGDDE--CIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 252 ~~~~~lh~~~~~~--~~~~L~~~~~~L~p~gG~lli~ 286 (354)
++....+..+.+. ..+++++++++|+| ||.+++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRP-GGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEE-EEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCC-CcEEEEe
Confidence 9854422111111 36899999999999 9988874
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.95 E-value=1e-09 Score=99.74 Aligned_cols=97 Identities=15% Similarity=0.073 Sum_probs=75.8
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCCC----CCcceEEEe
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFDG----VPEADAAII 253 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~----~~~~D~i~~ 253 (354)
++.+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|..+. ...||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 458999999999999999998778889999999 888887654 35899999998762 235999998
Q ss_pred ccccccCChHHH--HHHHHHHHHhcCCCCceEEEE
Q 018565 254 KWVLHDWGDDEC--IKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 254 ~~~lh~~~~~~~--~~~L~~~~~~L~p~gG~lli~ 286 (354)
...-+.-+.... .+++++++++|+| ||.+++.
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~ 229 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKP-NGYCVAQ 229 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEE-EEEEEEE
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCC-CcEEEEE
Confidence 643221112221 6899999999999 9988774
No 219
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.95 E-value=8.1e-10 Score=99.93 Aligned_cols=98 Identities=20% Similarity=0.166 Sum_probs=73.3
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCCC----CCcceEEEe
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFDG----VPEADAAII 253 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~----~~~~D~i~~ 253 (354)
++.+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|..+. ...||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 458999999999999999999878889999999 888887764 35899999998762 235999998
Q ss_pred ccccccCChHHH--HHHHHHHHHhcCCCCceEEEEe
Q 018565 254 KWVLHDWGDDEC--IKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 254 ~~~lh~~~~~~~--~~~L~~~~~~L~p~gG~lli~e 287 (354)
...-+.-+.... .+++++++++|+| ||.+++..
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~Lkp-gG~lv~~~ 222 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKE-DGILSSQG 222 (314)
T ss_dssp CCC-------------HHHHHHHHEEE-EEEEEEEC
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCC-CeEEEEEC
Confidence 554332122221 6899999999999 99888753
No 220
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.95 E-value=3.6e-10 Score=110.79 Aligned_cols=101 Identities=19% Similarity=0.180 Sum_probs=81.9
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC---CCC--cceEEEeccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD---GVP--EADAAIIKWV 256 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~---~~~--~~D~i~~~~~ 256 (354)
.+.+|||||||.|.++..|++. +.+++|+|. +.+++.|+. ..+|+|..++..+ ..+ .||+|++..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 4679999999999999999997 779999999 888887764 2469999998876 232 4999999999
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCC
Q 018565 257 LHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEE 292 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~ 292 (354)
+||++++....-+..+.+.|++ +|+.++...+..+
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~-~~~~~~~~~~~~e 178 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLAD-VTQAVILELAVKE 178 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHH-HSSEEEEECCCTT
T ss_pred hhcCCCHHHHHHHHHHHHHhcc-ccceeeEEecccc
Confidence 9999887655556677788888 8888887765443
No 221
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.95 E-value=7.3e-10 Score=99.87 Aligned_cols=99 Identities=19% Similarity=0.154 Sum_probs=75.0
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCC--C--CCcceEEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFD--G--VPEADAAI 252 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~--~--~~~~D~i~ 252 (354)
.+..+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|..+ + ...||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 3568999999999999999999878889999999 888877653 4689999999865 2 23599999
Q ss_pred eccccccCChH--HHHHHHHHHHHhcCCCCceEEEEe
Q 018565 253 IKWVLHDWGDD--ECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 253 ~~~~lh~~~~~--~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
+....+..+.. ...+++++++++|+| ||.+++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKE-DGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEE-EEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCC-CeEEEEec
Confidence 86544322211 125789999999999 99887754
No 222
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.93 E-value=7.1e-09 Score=92.43 Aligned_cols=96 Identities=13% Similarity=0.079 Sum_probs=71.9
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec--hHHhhhccc-C---------------CCeEEeecCCCCC-----
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL--PHVVCVAEK-C---------------HGVEHVGGDMFDG----- 244 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~--~~~~~~a~~-~---------------~~v~~~~~d~~~~----- 244 (354)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.++. . +++++...|..+.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 456799999999999999888753 348999998 577766543 1 3688886655431
Q ss_pred ----CCcceEEEeccccccCChHHHHHHHHHHHHhcC---C-CCceEEEE
Q 018565 245 ----VPEADAAIIKWVLHDWGDDECIKILKNCKEAIT---K-DKGKVIIV 286 (354)
Q Consensus 245 ----~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~---p-~gG~lli~ 286 (354)
...||+|++..++|+. +....+++.+.++|+ | +||.++++
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 1359999999999884 446689999999999 6 26776663
No 223
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.93 E-value=2.3e-09 Score=98.11 Aligned_cols=100 Identities=18% Similarity=0.207 Sum_probs=77.7
Q ss_pred HHhcCCCccCCCceEEEecCCccHHHHHHHHH-CCCCeEEEeec-hHHhhhccc-----------------CCCeEEeec
Q 018565 179 IIEGCPEVFDGIETLVDIGGNDGTTLRTLTKA-FPRIRGINFDL-PHVVCVAEK-----------------CHGVEHVGG 239 (354)
Q Consensus 179 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~-~~~~~~a~~-----------------~~~v~~~~~ 239 (354)
++..++ ..++.+|||+|||+|.++..+++. .|+.+++++|+ +.+++.+++ ..++++..+
T Consensus 97 ~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 97 ILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 444444 567789999999999999999998 58789999999 888877764 158999999
Q ss_pred CCCCC---CC--cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 240 DMFDG---VP--EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 240 d~~~~---~~--~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
|+.+. ++ .||+|++... ... .+++++.++|+| ||.+++...
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~~-----~~~--~~l~~~~~~Lkp-gG~lv~~~~ 220 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDML-----NPH--VTLPVFYPHLKH-GGVCAVYVV 220 (336)
T ss_dssp CTTCCC-------EEEEEECSS-----STT--TTHHHHGGGEEE-EEEEEEEES
T ss_pred ChHHcccccCCCCeeEEEECCC-----CHH--HHHHHHHHhcCC-CcEEEEEeC
Confidence 99873 33 4999998432 111 378999999999 999998764
No 224
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.92 E-value=6.4e-09 Score=98.96 Aligned_cols=103 Identities=15% Similarity=0.139 Sum_probs=80.4
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHhhhccc------CCCeEEeecCCCC-C--CC--cceEEEe
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPR-IRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-G--VP--EADAAII 253 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~~--~~D~i~~ 253 (354)
..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..+++++.+|+.+ + ++ .||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 456789999999999999999999877 79999999 777776654 3579999999987 3 43 4999996
Q ss_pred ------ccccccCChH-------HH-------HHHHHHHHHhcCCCCceEEEEeeee
Q 018565 254 ------KWVLHDWGDD-------EC-------IKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 254 ------~~~lh~~~~~-------~~-------~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
..+++..++. +. .++|+++.+.||| ||++++++...
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp-GG~lvy~tcs~ 392 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKP-GGRLLYTTCSI 392 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEE-EEEEEEEESCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEeCCC
Confidence 3344443332 11 5789999999999 99999877544
No 225
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.90 E-value=1.4e-09 Score=97.75 Aligned_cols=97 Identities=24% Similarity=0.216 Sum_probs=73.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCC--C--CCcceEEEe
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFD--G--VPEADAAII 253 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~--~--~~~~D~i~~ 253 (354)
.+.+|||||||+|..+..+++..|..+++++|+ +.+++.+++ .++++++.+|..+ + ...||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 458999999999999999999878889999999 888877653 3689999999765 2 234999998
Q ss_pred ccccccCChH---HHHHHHHHHHHhcCCCCceEEEE
Q 018565 254 KWVLHDWGDD---ECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 254 ~~~lh~~~~~---~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
...-+..... ...+++++++++|+| ||.+++.
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~Lkp-gG~lv~~ 204 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKE-DGVFSAE 204 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEE-EEEEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCC-CcEEEEE
Confidence 5332201111 125889999999999 9988874
No 226
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.88 E-value=3.3e-09 Score=93.48 Aligned_cols=88 Identities=13% Similarity=0.026 Sum_probs=73.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----------CCCeEEeecCCCCCCCcceEEEecccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----------CHGVEHVGGDMFDGVPEADAAIIKWVL 257 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~~~~~D~i~~~~~l 257 (354)
.+.+|||||||+|..+..+++. + .+++++|+ +.+++.+++ .++++++.+|..+-...||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~-- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQ-- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESS--
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECC--
Confidence 4579999999999999999988 7 89999999 899988864 3589999999887335699999862
Q ss_pred ccCChHHHHHHHHHHHHhcCCCCceEEEE
Q 018565 258 HDWGDDECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
+++. .+++.+++.|+| ||.+++.
T Consensus 148 ---~dp~--~~~~~~~~~L~p-gG~lv~~ 170 (262)
T 2cmg_A 148 ---EPDI--HRIDGLKRMLKE-DGVFISV 170 (262)
T ss_dssp ---CCCH--HHHHHHHTTEEE-EEEEEEE
T ss_pred ---CChH--HHHHHHHHhcCC-CcEEEEE
Confidence 2332 489999999999 9988874
No 227
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.88 E-value=5.4e-09 Score=88.14 Aligned_cols=88 Identities=17% Similarity=0.171 Sum_probs=67.1
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-CCCeEEeecCCCCCCCcceEEEeccccccCChHHH
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-CHGVEHVGGDMFDGVPEADAAIIKWVLHDWGDDEC 265 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~~~~~~D~i~~~~~lh~~~~~~~ 265 (354)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ ..+++++.+|+.+-...||+|++...+|++++...
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~~~~ 128 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPPFGSVVKHSD 128 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCCC-------C
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCeeEEEECCCchhccCchh
Confidence 35679999999999999999886 5557999999 889888876 33899999999883256999999999998876544
Q ss_pred HHHHHHHHHhc
Q 018565 266 IKILKNCKEAI 276 (354)
Q Consensus 266 ~~~L~~~~~~L 276 (354)
.++++++.+.+
T Consensus 129 ~~~l~~~~~~~ 139 (200)
T 1ne2_A 129 RAFIDKAFETS 139 (200)
T ss_dssp HHHHHHHHHHE
T ss_pred HHHHHHHHHhc
Confidence 57788887775
No 228
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.88 E-value=3.3e-09 Score=94.24 Aligned_cols=103 Identities=8% Similarity=0.043 Sum_probs=78.5
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHhhhccc------CCCeEEeecCCCC-C------CCcceEE
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPR-IRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-G------VPEADAA 251 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~------~~~~D~i 251 (354)
..++.+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++ ..+++++.+|+.+ + ...||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 456789999999999999999998876 79999999 787777654 3489999999876 3 2359999
Q ss_pred Eecccccc---------CCh-------HHHHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 252 IIKWVLHD---------WGD-------DECIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 252 ~~~~~lh~---------~~~-------~~~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
++.-.... |.. +.-.++|+++.+.||| ||++++.....
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~lv~stcs~ 214 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK-DGELVYSTCSM 214 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE-EEEEEEEESCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEEECCC
Confidence 98632211 111 1236899999999999 99998876543
No 229
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.83 E-value=2.1e-08 Score=88.69 Aligned_cols=120 Identities=11% Similarity=0.078 Sum_probs=90.0
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-C-CCcceEEEeccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-G-VPEADAAIIKWV 256 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~-~~~~D~i~~~~~ 256 (354)
..++.+|||+|||+|.++..+++. ...+++++|+ |..++.+++ .+++++..+|..+ . ...||.|++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 346789999999999999999886 4568999999 888887764 5789999999988 3 234999987543
Q ss_pred cccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCCc
Q 018565 257 LHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGFS 336 (354)
Q Consensus 257 lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf~ 336 (354)
. ....+|..+.++||| ||.|.+.+.+..+... ....+.++++.++.|++
T Consensus 202 ~------~~~~~l~~a~~~lk~-gG~ih~~~~~~e~~~~------------------------~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 202 V------RTHEFIPKALSIAKD-GAIIHYHNTVPEKLMP------------------------REPFETFKRITKEYGYD 250 (278)
T ss_dssp S------SGGGGHHHHHHHEEE-EEEEEEEEEEEGGGTT------------------------TTTHHHHHHHHHHTTCE
T ss_pred C------cHHHHHHHHHHHcCC-CCEEEEEeeecccccc------------------------hhHHHHHHHHHHHcCCc
Confidence 2 123678888999999 9988877765432211 11356677888899987
Q ss_pred ee
Q 018565 337 RY 338 (354)
Q Consensus 337 ~~ 338 (354)
+.
T Consensus 251 v~ 252 (278)
T 3k6r_A 251 VE 252 (278)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 230
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.83 E-value=5.6e-09 Score=93.93 Aligned_cols=99 Identities=16% Similarity=0.267 Sum_probs=71.9
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CCCcc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GVPEA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~~~ 248 (354)
..+++.+. ..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+.+ +.+.|
T Consensus 32 ~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~ 107 (299)
T 2h1r_A 32 DKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKF 107 (299)
T ss_dssp HHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCCC
T ss_pred HHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcccC
Confidence 34444444 556789999999999999999986 468999999 888887764 2689999999988 67789
Q ss_pred eEEEeccccccCChHHHHHHH---------------HHHHHhcCCCCc
Q 018565 249 DAAIIKWVLHDWGDDECIKIL---------------KNCKEAITKDKG 281 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L---------------~~~~~~L~p~gG 281 (354)
|+|+++ ..+++..+...+++ ..+.+.++| +|
T Consensus 108 D~Vv~n-~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~-~G 153 (299)
T 2h1r_A 108 DVCTAN-IPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLAN-VG 153 (299)
T ss_dssp SEEEEE-CCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCC-TT
T ss_pred CEEEEc-CCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcC-CC
Confidence 999875 44556666666666 346678887 66
No 231
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.82 E-value=6.7e-09 Score=95.36 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=79.8
Q ss_pred CCceEEEecCCccHHHHHHHHHCCC-----CeEEEeec-hHHhhhccc-----CCCeEEeecCCCCCC--CcceEEEecc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPR-----IRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFDGV--PEADAAIIKW 255 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~-----~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~--~~~D~i~~~~ 255 (354)
+..+|||+|||+|.++..+++..+. .+++++|+ +.+++.++. ..++.+..+|.+.+. ..||+|+++-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 209 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECC
Confidence 5689999999999999999987764 68999999 888887764 347899999998843 3599999998
Q ss_pred ccccCChHHH----------------HHHHHHHHHhcCCCCceEEEEe
Q 018565 256 VLHDWGDDEC----------------IKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 256 ~lh~~~~~~~----------------~~~L~~~~~~L~p~gG~lli~e 287 (354)
.+++++.++. ..+++++.+.|+| ||+++++.
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~-gG~~~~v~ 256 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKP-GGYLFFLV 256 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEE-EEEEEEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCC-CCEEEEEE
Confidence 8776654432 2689999999999 99888865
No 232
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.82 E-value=1.6e-08 Score=95.29 Aligned_cols=97 Identities=12% Similarity=0.051 Sum_probs=74.9
Q ss_pred CCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhcccCCCeEEeecCCCCC-C-CcceEEEecccccc----
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFDG-V-PEADAAIIKWVLHD---- 259 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~-~-~~~D~i~~~~~lh~---- 259 (354)
....+|||+|||+|.++..+++++ +..+++++|+ +.+++.+ .++++..+|+++. . +.||+|+++-....
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEEECCCCCCBSCT
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEEECcCccCcccc
Confidence 345699999999999999999876 6789999999 7777776 6799999999883 2 35999999533221
Q ss_pred ------CChHHH-----------------HHHHHHHHHhcCCCCceEEEEee
Q 018565 260 ------WGDDEC-----------------IKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 260 ------~~~~~~-----------------~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.+++.. ..+++++.+.|+| ||+++++-+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~-~G~~~~i~p 165 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKP-GGVLVFVVP 165 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEE-EEEEEEEEE
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCC-CCEEEEEEC
Confidence 222221 2678999999999 999888653
No 233
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.80 E-value=5.2e-08 Score=82.45 Aligned_cols=88 Identities=14% Similarity=-0.017 Sum_probs=70.9
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCCCCCcceEEEeccccccCC
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFDGVPEADAAIIKWVLHDWG 261 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~~~~D~i~~~~~lh~~~ 261 (354)
.++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.++. ..+++++.+|+.+-.+.||+|++.-.+|.+.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQR 126 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCcccc
Confidence 456899999999999999998873 347999999 888887765 2279999999988324699999998888876
Q ss_pred hHHHHHHHHHHHHhc
Q 018565 262 DDECIKILKNCKEAI 276 (354)
Q Consensus 262 ~~~~~~~L~~~~~~L 276 (354)
......+++.+.+.+
T Consensus 127 ~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 127 KHADRPFLLKAFEIS 141 (207)
T ss_dssp TTTTHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHhc
Confidence 555567888888876
No 234
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.80 E-value=1.8e-08 Score=87.82 Aligned_cols=103 Identities=14% Similarity=0.204 Sum_probs=74.2
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CCCc-c
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GVPE-A 248 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~~-~ 248 (354)
.+.+++.+. ..+..+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++. .
T Consensus 19 ~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 94 (244)
T 1qam_A 19 IDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQ 94 (244)
T ss_dssp HHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSC
T ss_pred HHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCC
Confidence 355666665 5677899999999999999999985 68999999 888887765 3689999999998 6653 3
Q ss_pred eEEEeccccccCChHHHHHHH--------------HHHHHhcCCCCceE
Q 018565 249 DAAIIKWVLHDWGDDECIKIL--------------KNCKEAITKDKGKV 283 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L--------------~~~~~~L~p~gG~l 283 (354)
+..++++..++++.+...+++ ..+.+.++| +|++
T Consensus 95 ~~~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~-~G~l 142 (244)
T 1qam_A 95 SYKIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNT-KRSL 142 (244)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCT-TSHH
T ss_pred CeEEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcC-Ccch
Confidence 445556665555544444444 235666776 6644
No 235
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.77 E-value=1.8e-08 Score=91.78 Aligned_cols=97 Identities=13% Similarity=0.068 Sum_probs=73.7
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CC-CeEEeecCCCCC-------CCcceEEE
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CH-GVEHVGGDMFDG-------VPEADAAI 252 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~-~v~~~~~d~~~~-------~~~~D~i~ 252 (354)
+..+|||+|||+|.++..+++.. .+++++|+ +.+++.+++ .+ +++++.+|+++. ...||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 45799999999999999999864 49999999 888887765 22 599999999872 23599999
Q ss_pred eccccccC--------ChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 253 IKWVLHDW--------GDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 253 ~~~~lh~~--------~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
+.-..... ..+...++++++.++|+| ||.+++...
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~Lkp-gG~lli~~~ 273 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSP-KALGLVLTA 273 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCT-TCCEEEEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCc-CcEEEEEEC
Confidence 84321110 023456899999999999 998776553
No 236
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.74 E-value=6.1e-09 Score=90.91 Aligned_cols=104 Identities=15% Similarity=0.212 Sum_probs=77.2
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CCC---c
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GVP---E 247 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~---~ 247 (354)
..+++.+. ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.+++ .++++++.+|+.+ +++ +
T Consensus 19 ~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~ 94 (245)
T 1yub_A 19 NQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQR 94 (245)
T ss_dssp HHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSE
T ss_pred HHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCC
Confidence 45555555 5677899999999999999999984 78999999 888888775 3589999999998 554 2
Q ss_pred ceEEEeccccccCChHHHHHHH--------------HHHHHhcCCCCceEEEEe
Q 018565 248 ADAAIIKWVLHDWGDDECIKIL--------------KNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L--------------~~~~~~L~p~gG~lli~e 287 (354)
| .++++.-++.+......++ +.+.+.|+| ||++.+..
T Consensus 95 f--~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~-~G~l~v~~ 145 (245)
T 1yub_A 95 Y--KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDI-HRTLGLLL 145 (245)
T ss_dssp E--EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCG-GGSHHHHT
T ss_pred c--EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCC-CCchhhhh
Confidence 5 3445554444444444444 558899999 99877643
No 237
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.74 E-value=2.9e-08 Score=88.32 Aligned_cols=116 Identities=13% Similarity=0.065 Sum_probs=81.1
Q ss_pred cCCCceEEEecCCc------cHHHHHHHHHCC-CCeEEEeechHHhhhcccCCCeEE-eecCCCC-CCC-cceEEEeccc
Q 018565 187 FDGIETLVDIGGND------GTTLRTLTKAFP-RIRGINFDLPHVVCVAEKCHGVEH-VGGDMFD-GVP-EADAAIIKWV 256 (354)
Q Consensus 187 ~~~~~~vLDvG~G~------G~~~~~l~~~~p-~~~~~~~D~~~~~~~a~~~~~v~~-~~~d~~~-~~~-~~D~i~~~~~ 256 (354)
+.++.+|||+|||+ |. ..+++..| +.+++++|+.+.+ .++++ +.+|+.+ +++ .||+|++...
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v------~~v~~~i~gD~~~~~~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV------SDADSTLIGDCATVHTANKWDLIISDMY 132 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB------CSSSEEEESCGGGCCCSSCEEEEEECCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCC------CCCEEEEECccccCCccCcccEEEEcCC
Confidence 56778999999955 66 44566666 6899999993331 46889 9999988 444 5999998643
Q ss_pred ccc-----CC----hHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHH
Q 018565 257 LHD-----WG----DDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWD 327 (354)
Q Consensus 257 lh~-----~~----~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~ 327 (354)
.+. .+ ......+++.++++||| ||++++...... ...++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lkp-GG~~v~~~~~~~------------------------------~~~~l~ 181 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLAL-GGSIAVKITEHS------------------------------WNADLY 181 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEE-EEEEEEEECSSS------------------------------CCHHHH
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCC-CcEEEEEEeccC------------------------------CHHHHH
Confidence 221 00 12345899999999999 999988532110 123667
Q ss_pred HHHHHcCCceeEEE
Q 018565 328 YVLRQAGFSRYNIT 341 (354)
Q Consensus 328 ~ll~~aGf~~~~~~ 341 (354)
+++++.||..+++.
T Consensus 182 ~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 182 KLMGHFSWWTAFVT 195 (290)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHHHcCCcEEEEE
Confidence 77888888777665
No 238
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.73 E-value=3.7e-08 Score=91.39 Aligned_cols=120 Identities=18% Similarity=0.105 Sum_probs=89.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC--cceEEEeccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP--EADAAIIKWV 256 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~--~~D~i~~~~~ 256 (354)
.+..+|||+|||+|.++..++...+..+++++|+ +.+++.++. .+++++..+|+.+ +.+ .||+|+++-.
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 3568999999999999999999887778999999 899888875 2589999999998 543 5999999655
Q ss_pred cccCC------hHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHH
Q 018565 257 LHDWG------DDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVL 330 (354)
Q Consensus 257 lh~~~------~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll 330 (354)
.+... .+...++++.+.+.| + |+.+++.. +.+.+.+.+
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l-~-g~~~~i~~----------------------------------~~~~~~~~~ 339 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL-E-KRGVFITT----------------------------------EKKAIEEAI 339 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE-E-EEEEEEES----------------------------------CHHHHHHHH
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc-C-CeEEEEEC----------------------------------CHHHHHHHH
Confidence 44321 112367888888888 5 44443311 244556778
Q ss_pred HHcCCceeEEEEc
Q 018565 331 RQAGFSRYNITSI 343 (354)
Q Consensus 331 ~~aGf~~~~~~~~ 343 (354)
.+.||+..+..++
T Consensus 340 ~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 340 AENGFEIIHHRVI 352 (373)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHcCCEEEEEEEE
Confidence 8899999887776
No 239
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.73 E-value=2.2e-08 Score=94.70 Aligned_cols=103 Identities=13% Similarity=0.137 Sum_probs=79.4
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-C--CC--cceEEEec-
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-G--VP--EADAAIIK- 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~--~~--~~D~i~~~- 254 (354)
..++.+|||+|||+|..+..+++..++.+++++|+ +..+..+++ ..+++++.+|+.+ + ++ .||+|++.
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 45678999999999999999999998889999999 777776654 3468899999987 3 32 49999962
Q ss_pred -----cccccCChH-------HH-------HHHHHHHHHhcCCCCceEEEEeeee
Q 018565 255 -----WVLHDWGDD-------EC-------IKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 255 -----~~lh~~~~~-------~~-------~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
.+++..++. +. .++|+++.+.||| ||++++++...
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp-GG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT-GGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE-EEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEECCC
Confidence 334433321 11 4889999999999 99999877544
No 240
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.70 E-value=1.7e-08 Score=95.53 Aligned_cols=101 Identities=9% Similarity=0.054 Sum_probs=76.3
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-C--CC-cceEEEec-
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPR-IRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-G--VP-EADAAIIK- 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~--~~-~~D~i~~~- 254 (354)
..++.+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++ .-.+.++.+|..+ + .+ .||+|++.
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 456789999999999999999998765 68999999 888877764 2228999999876 3 23 49999962
Q ss_pred -----ccc-------ccCChHHH-------HHHHHHHHHhcCCCCceEEEEee
Q 018565 255 -----WVL-------HDWGDDEC-------IKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 255 -----~~l-------h~~~~~~~-------~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.++ ..|..+.. .++|+++.+.||| ||+|+.+.-
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp-GG~LvysTC 230 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP-GGVLVYSTC 230 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE-EEEEEEEES
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEec
Confidence 112 22333222 6799999999999 999988654
No 241
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.68 E-value=8.7e-08 Score=91.50 Aligned_cols=101 Identities=15% Similarity=0.231 Sum_probs=77.6
Q ss_pred CCceEEEecCCccHHHHHHHHHCC-CCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-C--CC-cceEEEec--
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFP-RIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-G--VP-EADAAIIK-- 254 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~~-~~D~i~~~-- 254 (354)
++.+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ..+++++.+|..+ + .+ .||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 678999999999999999999875 478999999 888877664 3579999999987 3 33 49999982
Q ss_pred ----ccc-------ccCChHH-------HHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 255 ----WVL-------HDWGDDE-------CIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 255 ----~~l-------h~~~~~~-------~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
.++ ++|+.+. -.++|+++.++||| ||+|+++....
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp-GG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRP-GGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecccC
Confidence 122 2233322 24789999999999 99998876543
No 242
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.65 E-value=3.8e-08 Score=93.07 Aligned_cols=103 Identities=12% Similarity=0.157 Sum_probs=76.4
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHhhhccc------CCCeEEeecCCCC-C--CC-cceEEEec
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPR-IRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-G--VP-EADAAIIK 254 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~~-~~D~i~~~ 254 (354)
..++.+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..++.++.+|..+ + .+ .||+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 456789999999999999999987654 68999999 878777654 4579999999876 2 23 59999983
Q ss_pred cc------ccc-------CChHH-------HHHHHHHHHHhcCCCCceEEEEeeee
Q 018565 255 WV------LHD-------WGDDE-------CIKILKNCKEAITKDKGKVIIVEAII 290 (354)
Q Consensus 255 ~~------lh~-------~~~~~-------~~~~L~~~~~~L~p~gG~lli~e~~~ 290 (354)
-. +.. |..+. -.++|+++.+.||| ||+|+.+.-..
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp-GG~LvYsTCs~ 237 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN-KGQLIYSTCTF 237 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE-EEEEEEEESCC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEEeec
Confidence 32 211 11111 13789999999999 99988765433
No 243
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.60 E-value=1.5e-07 Score=84.06 Aligned_cols=89 Identities=13% Similarity=0.217 Sum_probs=67.3
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CCCc--
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GVPE-- 247 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~~-- 247 (354)
...+++.+. ..+..+|||||||+|.++..+++. ..+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 39 ~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 39 VNKAVESAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSC
T ss_pred HHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCC
Confidence 345555555 567789999999999999999998 568999999 888887765 4789999999998 6654
Q ss_pred ceEEEeccccccCChHHHHHHH
Q 018565 248 ADAAIIKWVLHDWGDDECIKIL 269 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~~~~~~L 269 (354)
||+|+++.. ++++.+-..++|
T Consensus 115 fD~Iv~NlP-y~is~pil~~lL 135 (295)
T 3gru_A 115 FNKVVANLP-YQISSPITFKLI 135 (295)
T ss_dssp CSEEEEECC-GGGHHHHHHHHH
T ss_pred ccEEEEeCc-ccccHHHHHHHH
Confidence 999986644 334444333333
No 244
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.60 E-value=7.9e-08 Score=87.84 Aligned_cols=92 Identities=14% Similarity=0.126 Sum_probs=74.2
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCCCCcceEEEecccccc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDGVPEADAAIIKWVLHD 259 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~~~~D~i~~~~~lh~ 259 (354)
.++.+|||+|||+|.++.. ++ ...+++++|+ +.+++.+++ .++++++.+|+++....||+|++.-.-
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~-- 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPK-- 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTT--
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcH--
Confidence 3568999999999999999 76 4778999999 888887765 258999999998844669999984321
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEEEEeee
Q 018565 260 WGDDECIKILKNCKEAITKDKGKVIIVEAI 289 (354)
Q Consensus 260 ~~~~~~~~~L~~~~~~L~p~gG~lli~e~~ 289 (354)
...++++.+.+.|+| ||.+++.+..
T Consensus 269 ----~~~~~l~~~~~~L~~-gG~l~~~~~~ 293 (336)
T 2yx1_A 269 ----FAHKFIDKALDIVEE-GGVIHYYTIG 293 (336)
T ss_dssp ----TGGGGHHHHHHHEEE-EEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHcCC-CCEEEEEEee
Confidence 123789999999999 9998887654
No 245
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.58 E-value=1.2e-06 Score=80.65 Aligned_cols=152 Identities=18% Similarity=0.196 Sum_probs=95.4
Q ss_pred CCceEEEecCCccHHHHHH--------HHHC-------CCCeEEEeechHH--------hhhccc--------------C
Q 018565 189 GIETLVDIGGNDGTTLRTL--------TKAF-------PRIRGINFDLPHV--------VCVAEK--------------C 231 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l--------~~~~-------p~~~~~~~D~~~~--------~~~a~~--------------~ 231 (354)
...+|+|+|||+|..+..+ .+++ |.+++..-|+|.- +...++ .
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 3689999999999888776 2233 7888999998521 122110 0
Q ss_pred CCeEEeecCCCC-CCC--cceEEEeccccccCCh------------------------------------HHHHHHHHHH
Q 018565 232 HGVEHVGGDMFD-GVP--EADAAIIKWVLHDWGD------------------------------------DECIKILKNC 272 (354)
Q Consensus 232 ~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~~~------------------------------------~~~~~~L~~~ 272 (354)
--+.-+++.|.. .+| ++|+|+.+.+||-.++ .+...+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 113335677777 455 4999999999997651 1344579999
Q ss_pred HHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhc-cH-----Hhhcc------------cCCcccCCHHHHHHHHH-Hc
Q 018565 273 KEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLML-DM-----VMMAH------------TNKGKERSLKEWDYVLR-QA 333 (354)
Q Consensus 273 ~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~-~l-----~~~~~------------~~~g~~~t~~e~~~ll~-~a 333 (354)
++.|+| ||++++.-...++... .. .......+ +. ..+.. ......++.+|+..+++ +.
T Consensus 212 a~eL~p-GG~mvl~~~gr~~~~~-~~-~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~ 288 (374)
T 3b5i_A 212 AAEVKR-GGAMFLVCLGRTSVDP-TD-QGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANG 288 (374)
T ss_dssp HHHEEE-EEEEEEEEEECCCSST-TC-CHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHC
T ss_pred HHHhCC-CCEEEEEEecCCCCcc-cc-ccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcC
Confidence 999999 9999987776554321 10 00000111 11 11111 01123468999999998 59
Q ss_pred CCceeEEEEc
Q 018565 334 GFSRYNITSI 343 (354)
Q Consensus 334 Gf~~~~~~~~ 343 (354)
||++.++...
T Consensus 289 ~F~I~~le~~ 298 (374)
T 3b5i_A 289 SFAIDKLVVY 298 (374)
T ss_dssp SEEEEEEEEE
T ss_pred CcEEEEEEEE
Confidence 9998876543
No 246
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.58 E-value=7.8e-08 Score=89.50 Aligned_cols=97 Identities=13% Similarity=0.064 Sum_probs=75.3
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCC-------CCcceEEEec
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDG-------VPEADAAIIK 254 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~-------~~~~D~i~~~ 254 (354)
+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++.+|+++. ...||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5689999999999999999987 568999999 888887765 24599999998772 1259999985
Q ss_pred cccccCCh-------HHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 255 WVLHDWGD-------DECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 255 ~~lh~~~~-------~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
-..+..+. ....++++.+.+.|+| ||.+++...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~~ 326 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKE-GGILATASC 326 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEE-EEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEEC
Confidence 33222111 3456789999999999 999888653
No 247
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.58 E-value=7.8e-08 Score=89.98 Aligned_cols=98 Identities=11% Similarity=0.084 Sum_probs=75.4
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CCCeEEeecCCCCC-------CCcceEEEe
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFDG-------VPEADAAII 253 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~-------~~~~D~i~~ 253 (354)
+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+++. ...||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 5689999999999999999986 3458999999 888887765 12899999998762 125999998
Q ss_pred ccccccCCh-------HHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 254 KWVLHDWGD-------DECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 254 ~~~lh~~~~-------~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.-..+..+. .....+++++.+.|+| ||.++++..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~lv~~~~ 336 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKD-GGILVTCSC 336 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEE-EEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEEC
Confidence 543322221 3456889999999999 998887653
No 248
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.53 E-value=9.1e-08 Score=90.88 Aligned_cols=100 Identities=17% Similarity=0.083 Sum_probs=76.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHC-------------CCCeEEEeec-hHHhhhccc-----C-C--CeEEeecCCCC-C
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAF-------------PRIRGINFDL-PHVVCVAEK-----C-H--GVEHVGGDMFD-G 244 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~-----~-~--~v~~~~~d~~~-~ 244 (354)
....+|+|.|||+|.++..+.+.. +..+++++|+ +.++..++. . . ++.+..+|.+. +
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 456799999999999999888753 4568999999 888877653 1 1 68899999988 4
Q ss_pred CC-cceEEEeccccccCChH---------------HHHHHHHHHHHhcCCCCceEEEEee
Q 018565 245 VP-EADAAIIKWVLHDWGDD---------------ECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 245 ~~-~~D~i~~~~~lh~~~~~---------------~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.. .||+|+++-.++..... .-..+++++.+.|+| ||++.++-+
T Consensus 250 ~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~-gG~~a~V~p 308 (445)
T 2okc_A 250 PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKT-GGRAAVVLP 308 (445)
T ss_dssp CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEE-EEEEEEEEE
T ss_pred ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhcc-CCEEEEEEC
Confidence 33 59999998666542211 124789999999999 999988653
No 249
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.53 E-value=2.9e-07 Score=85.76 Aligned_cols=111 Identities=9% Similarity=0.036 Sum_probs=79.7
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCC--------------------------------------CeEE
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPR--------------------------------------IRGI 217 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~ 217 (354)
+..++.... +.+...|||.+||+|.+++..+....+ .+++
T Consensus 190 Aa~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 267 (393)
T 3k0b_A 190 AAALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNII 267 (393)
T ss_dssp HHHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEE
Confidence 344555555 557789999999999999988765433 5699
Q ss_pred Eeec-hHHhhhccc-------CCCeEEeecCCCC-CCC-cceEEEeccccccC-C-hHHHHHHHHHHHHhcCC-CCceEE
Q 018565 218 NFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP-EADAAIIKWVLHDW-G-DDECIKILKNCKEAITK-DKGKVI 284 (354)
Q Consensus 218 ~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~-~~D~i~~~~~lh~~-~-~~~~~~~L~~~~~~L~p-~gG~ll 284 (354)
++|+ +.+++.++. .+++++..+|+.+ +.+ .||+|+++-..+.- . .+....+.+.+.+.||+ +||+++
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEE
Confidence 9999 899888775 3579999999998 444 59999997544321 1 24556667767666654 388888
Q ss_pred EEee
Q 018565 285 IVEA 288 (354)
Q Consensus 285 i~e~ 288 (354)
|+..
T Consensus 348 iit~ 351 (393)
T 3k0b_A 348 VLTS 351 (393)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8653
No 250
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.53 E-value=8e-08 Score=89.46 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=72.9
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------CC-CeEEeecCCCC--C-C----CcceEEE
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------CH-GVEHVGGDMFD--G-V----PEADAAI 252 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~-~v~~~~~d~~~--~-~----~~~D~i~ 252 (354)
++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ .+ +++++.+|+++ + . ..||+|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 46799999999999999999853 338999999 888888765 22 89999999876 2 1 2599999
Q ss_pred eccccc-----cCC--hHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 253 IKWVLH-----DWG--DDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 253 ~~~~lh-----~~~--~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
+.-... ... .....++++.+.+.|+| ||.+++..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~p-gG~l~~~~ 331 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSE-NGLIIAST 331 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEE-EEEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCC-CcEEEEEe
Confidence 853331 111 12345688889999999 99887754
No 251
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.53 E-value=1.6e-07 Score=87.38 Aligned_cols=97 Identities=8% Similarity=0.064 Sum_probs=71.6
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCCC---C-CcceEEEeccccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFDG---V-PEADAAIIKWVLH 258 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~---~-~~~D~i~~~~~lh 258 (354)
++.+|||+|||+|.++..+++. +.+++++|+ +.+++.+++ .-..++..+|+++. . +.||+|++.-...
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 4789999999999999999987 345999999 888888765 22235678888772 2 2499999854332
Q ss_pred cCCh-------HHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 259 DWGD-------DECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 259 ~~~~-------~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
.-+. ....++++.+.+.|+| ||.|+++..
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~Lkp-GG~Lv~~s~ 327 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAE-EGFLWLSSC 327 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEE-EEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEEC
Confidence 1111 2335789999999999 999886553
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.50 E-value=9e-07 Score=82.07 Aligned_cols=111 Identities=16% Similarity=0.030 Sum_probs=81.9
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCC--------------------------------------CeEE
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPR--------------------------------------IRGI 217 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~ 217 (354)
+..++.... +.+...+||.+||+|.++++.+....+ .+++
T Consensus 183 Aaall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 183 AAAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 344455445 557789999999999999988765433 5699
Q ss_pred Eeec-hHHhhhccc-------CCCeEEeecCCCC-CCC-cceEEEecccccc-C-ChHHHHHHHHHHHHhcCC-CCceEE
Q 018565 218 NFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP-EADAAIIKWVLHD-W-GDDECIKILKNCKEAITK-DKGKVI 284 (354)
Q Consensus 218 ~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~-~~D~i~~~~~lh~-~-~~~~~~~~L~~~~~~L~p-~gG~ll 284 (354)
++|+ +.+++.++. .+++++..+|+.+ +.+ .||+|+++-..+. + ..++..++.+.+.+.||+ +||+++
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 9999 889888775 3579999999998 443 5999999755432 2 235667788888877764 388888
Q ss_pred EEee
Q 018565 285 IVEA 288 (354)
Q Consensus 285 i~e~ 288 (354)
|+..
T Consensus 341 iit~ 344 (384)
T 3ldg_A 341 ILTN 344 (384)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8654
No 253
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.49 E-value=1.9e-07 Score=87.33 Aligned_cols=97 Identities=10% Similarity=-0.002 Sum_probs=74.4
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------C-C-CeEEeecCCCCC-------CCcceEEE
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------C-H-GVEHVGGDMFDG-------VPEADAAI 252 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~-~v~~~~~d~~~~-------~~~~D~i~ 252 (354)
++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ . . +++++.+|+++. ...||+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 46799999999999999999864 458999999 888887764 2 3 799999998872 13599999
Q ss_pred eccccccCC-------hHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 253 IKWVLHDWG-------DDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 253 ~~~~lh~~~-------~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
+.-.....+ .....+++.++.+.|+| ||.+++..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp-gG~l~~~~ 339 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNE-GGILLTFS 339 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEE-EEEEEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEe
Confidence 864321110 13456889999999999 99888754
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.49 E-value=4.7e-07 Score=84.15 Aligned_cols=111 Identities=17% Similarity=0.123 Sum_probs=80.7
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCC--------------------------------------CeEE
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPR--------------------------------------IRGI 217 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~--------------------------------------~~~~ 217 (354)
+..++.... +.+..+|||.+||+|.+++.++....+ .+++
T Consensus 184 Aa~ll~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 184 AAGLIYLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 344555555 557789999999999999988775322 5799
Q ss_pred Eeec-hHHhhhccc-------CCCeEEeecCCCC-CCC-cceEEEecccccc-CC-hHHHHHHHHHHHHhcCC-CCceEE
Q 018565 218 NFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP-EADAAIIKWVLHD-WG-DDECIKILKNCKEAITK-DKGKVI 284 (354)
Q Consensus 218 ~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~-~~D~i~~~~~lh~-~~-~~~~~~~L~~~~~~L~p-~gG~ll 284 (354)
++|+ +.+++.++. .+++++..+|+.+ +.+ .||+|+++-.... +. .+...++.+.+.+.|++ +|+.++
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 9999 899988875 3479999999998 444 4999999655432 12 34566777777777764 278888
Q ss_pred EEee
Q 018565 285 IVEA 288 (354)
Q Consensus 285 i~e~ 288 (354)
++..
T Consensus 342 iit~ 345 (385)
T 3ldu_A 342 LITS 345 (385)
T ss_dssp EEES
T ss_pred EEEC
Confidence 7653
No 255
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.45 E-value=2.6e-07 Score=90.24 Aligned_cols=128 Identities=16% Similarity=0.197 Sum_probs=87.5
Q ss_pred ChhHHHhhChHHHHHHHHHhhhchhhhHHHHHhcCCCc--cCCCceEEEecCCccHHHHHHHH---HC-CCCeEEEeech
Q 018565 149 DVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEV--FDGIETLVDIGGNDGTTLRTLTK---AF-PRIRGINFDLP 222 (354)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~--~~~~~~vLDvG~G~G~~~~~l~~---~~-p~~~~~~~D~~ 222 (354)
..|+.+++++-+-..|.+|+.. .+.+..... ......|+|||||+|-++...++ +. -++++.+++-.
T Consensus 322 ~tYevFEkD~vKy~~Ye~AI~~-------Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEkn 394 (637)
T 4gqb_A 322 QTYEVFEKDPIKYSQYQQAIYK-------CLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKN 394 (637)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-------HHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESC
T ss_pred hhhhhhcCChhhHHHHHHHHHH-------HHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 4588899999887888877653 222222210 22446899999999988544433 32 23467888884
Q ss_pred HHhhhccc-------CCCeEEeecCCCC-CCCc-ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEE
Q 018565 223 HVVCVAEK-------CHGVEHVGGDMFD-GVPE-ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVI 284 (354)
Q Consensus 223 ~~~~~a~~-------~~~v~~~~~d~~~-~~~~-~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~ll 284 (354)
.+...+++ .++|+++.+|+.+ ..|+ +|+|+.-.+=.....+....+|....+.||| ||.++
T Consensus 395 p~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKP-gGimi 464 (637)
T 4gqb_A 395 PNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKD-DGVSI 464 (637)
T ss_dssp HHHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEE-EEEEE
T ss_pred HHHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCC-CcEEc
Confidence 45554443 7899999999999 6664 9999886554444445556788888899999 87653
No 256
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.43 E-value=3.5e-07 Score=83.20 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=71.0
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--C------------CCeEEeecCCCC--C-----C
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--C------------HGVEHVGGDMFD--G-----V 245 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~------------~~v~~~~~d~~~--~-----~ 245 (354)
+++.+|||||||+|..+..+++..+ .+++.+|+ +.+++.+++ . ++++++.+|.++ . .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 3578999999999999999998765 78999999 889888764 1 279999999887 2 1
Q ss_pred CcceEEEecccc-c-cCChH--HHHHHHHHH----HHhcCCCCceEEEE
Q 018565 246 PEADAAIIKWVL-H-DWGDD--ECIKILKNC----KEAITKDKGKVIIV 286 (354)
Q Consensus 246 ~~~D~i~~~~~l-h-~~~~~--~~~~~L~~~----~~~L~p~gG~lli~ 286 (354)
..||+|++-..- . ..... ...++++.+ .++|+| ||.+++.
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~p-gGilv~q 313 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ-DGKYFTQ 313 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE-EEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCC-CcEEEEE
Confidence 359999986432 1 00110 224556665 899999 8877764
No 257
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.43 E-value=6.4e-07 Score=78.98 Aligned_cols=89 Identities=17% Similarity=0.062 Sum_probs=66.6
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---CCCeEEeecCCCC-CCC---cc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---CHGVEHVGGDMFD-GVP---EA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~v~~~~~d~~~-~~~---~~ 248 (354)
+.+++.+. ..+. +|||||||+|.++..++++. .+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .+
T Consensus 37 ~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~ 111 (271)
T 3fut_A 37 RRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQG 111 (271)
T ss_dssp HHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTT
T ss_pred HHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCc
Confidence 34444444 5566 99999999999999999974 68999999 888888765 4689999999998 654 46
Q ss_pred eEEEeccccccCChHHHHHHHHH
Q 018565 249 DAAIIKWVLHDWGDDECIKILKN 271 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~ 271 (354)
|.|+ .|.-++.+.+-..++|..
T Consensus 112 ~~iv-~NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 112 SLLV-ANLPYHIATPLVTRLLKT 133 (271)
T ss_dssp EEEE-EEECSSCCHHHHHHHHHH
T ss_pred cEEE-ecCcccccHHHHHHHhcC
Confidence 6654 455566676666666654
No 258
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.41 E-value=6.5e-07 Score=78.07 Aligned_cols=90 Identities=14% Similarity=0.153 Sum_probs=66.5
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--CCCeEEeecCCCC-CCCc-c-eE
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--CHGVEHVGGDMFD-GVPE-A-DA 250 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~-~~~~-~-D~ 250 (354)
+.+++.+. ..+..+|||||||+|.++..++++ +..+++++|+ +.+++.+++ ..+++++.+|+.+ +++. + +.
T Consensus 21 ~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~ 97 (249)
T 3ftd_A 21 KKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKEL 97 (249)
T ss_dssp HHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSE
T ss_pred HHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCc
Confidence 45555555 556789999999999999999987 4578999999 888887765 3679999999998 6554 2 45
Q ss_pred EEeccccccCChHHHHHHH
Q 018565 251 AIIKWVLHDWGDDECIKIL 269 (354)
Q Consensus 251 i~~~~~lh~~~~~~~~~~L 269 (354)
+++.|.-++.+.+-..++|
T Consensus 98 ~vv~NlPy~i~~~il~~ll 116 (249)
T 3ftd_A 98 KVVGNLPYNVASLIIENTV 116 (249)
T ss_dssp EEEEECCTTTHHHHHHHHH
T ss_pred EEEEECchhccHHHHHHHH
Confidence 6666666665544433333
No 259
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.41 E-value=2.3e-06 Score=78.75 Aligned_cols=151 Identities=16% Similarity=0.141 Sum_probs=92.4
Q ss_pred CceEEEecCCccHHHHHHHHH-----------------CCCCeEEEeech-----------H-Hhhhccc--C--CCeEE
Q 018565 190 IETLVDIGGNDGTTLRTLTKA-----------------FPRIRGINFDLP-----------H-VVCVAEK--C--HGVEH 236 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~-----------~-~~~~a~~--~--~~v~~ 236 (354)
..+|+|+||++|..+..++.. .|.++++.-|+| . ..+.+++ . .+--|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 689999999999998877665 477888899986 1 1111111 1 12233
Q ss_pred ---eecCCCC-CCC--cceEEEeccccccCChH-------------------------HHH------------HHHHHHH
Q 018565 237 ---VGGDMFD-GVP--EADAAIIKWVLHDWGDD-------------------------ECI------------KILKNCK 273 (354)
Q Consensus 237 ---~~~d~~~-~~~--~~D~i~~~~~lh~~~~~-------------------------~~~------------~~L~~~~ 273 (354)
+++.|.. .+| ++|+|+.+.+||-.++. .+. .+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777 466 49999999999954322 121 2377789
Q ss_pred HhcCCCCceEEEEeeeeCCC--CCCCcchhhhhhhccHHhhc---------ccCCcccCCHHHHHHHHHHcC-CceeEEE
Q 018565 274 EAITKDKGKVIIVEAIIEED--DGVDNKFKSVRLMLDMVMMA---------HTNKGKERSLKEWDYVLRQAG-FSRYNIT 341 (354)
Q Consensus 274 ~~L~p~gG~lli~e~~~~~~--~~~~~~~~~~~~~~~l~~~~---------~~~~g~~~t~~e~~~ll~~aG-f~~~~~~ 341 (354)
+.|+| ||++++.-...++. .. ...-.....+.++.... .......++.+|++.+++++| |++.++.
T Consensus 213 ~eL~p-GG~mvl~~~gr~~~~~~~-~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 213 EELIS-RGRMLLTFICKEDEFDHP-NSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp HHEEE-EEEEEEEEECCCTTTCCC-CHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred HHhcc-CCeEEEEEecCCCcccCc-ccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 99999 99999877766554 21 10000011121111110 101224568999999999985 7777654
Q ss_pred E
Q 018565 342 S 342 (354)
Q Consensus 342 ~ 342 (354)
.
T Consensus 291 ~ 291 (384)
T 2efj_A 291 T 291 (384)
T ss_dssp E
T ss_pred E
Confidence 3
No 260
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.38 E-value=4.5e-07 Score=81.22 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=62.4
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----CCCeEEeecCCCC-C--C--
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----CHGVEHVGGDMFD-G--V-- 245 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~--~-- 245 (354)
+.+++.+. ..++.+|||+|||+|.++..+++++|+.+++++|. +.+++.+++ ..+++++.+|+.+ + .
T Consensus 16 ~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 16 REVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 44455444 55678999999999999999999999889999999 889888765 3689999999876 3 1
Q ss_pred ---CcceEEEecc
Q 018565 246 ---PEADAAIIKW 255 (354)
Q Consensus 246 ---~~~D~i~~~~ 255 (354)
..||.|++.-
T Consensus 94 ~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 94 LGIEKVDGILMDL 106 (301)
T ss_dssp TTCSCEEEEEEEC
T ss_pred cCCCCCCEEEEcC
Confidence 3599998744
No 261
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.37 E-value=1.3e-06 Score=82.63 Aligned_cols=90 Identities=10% Similarity=0.102 Sum_probs=66.0
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCC-------CcceEEE
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGV-------PEADAAI 252 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~-------~~~D~i~ 252 (354)
..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|++ ..+++|+.+|+.+.. ..||+|+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 456689999999999999999987 678999999 888888764 358999999998732 1499999
Q ss_pred eccccccCChHHHHHHHHHHHHhcCCCCceEEE
Q 018565 253 IKWVLHDWGDDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 253 ~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
+.-.-. ....+++.+.+ ++| ++.+++
T Consensus 362 ~dPPr~-----g~~~~~~~l~~-~~p-~~ivyv 387 (433)
T 1uwv_A 362 LDPARA-----GAAGVMQQIIK-LEP-IRIVYV 387 (433)
T ss_dssp ECCCTT-----CCHHHHHHHHH-HCC-SEEEEE
T ss_pred ECCCCc-----cHHHHHHHHHh-cCC-CeEEEE
Confidence 843221 12245555543 678 665554
No 262
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.36 E-value=6.2e-06 Score=74.91 Aligned_cols=144 Identities=14% Similarity=0.153 Sum_probs=105.2
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc---------------------------CCCeEEeecC
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK---------------------------CHGVEHVGGD 240 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~---------------------------~~~v~~~~~d 240 (354)
.+...||.+|||.......+...+++++++-+|.|++++.-++ .++.+++..|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3568999999999999999998888999999999988765432 2689999999
Q ss_pred CCC-CC--------C--c-ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhcc
Q 018565 241 MFD-GV--------P--E-ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLD 308 (354)
Q Consensus 241 ~~~-~~--------~--~-~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~ 308 (354)
+.+ +. + + ..++++-.++++++.+.+.++++.+.+.+ | +|.+++.|.+.+.... . ++... ....
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~-~~~~v~~e~i~~~~~~-~-~fg~~-m~~~ 250 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-S-HGLWISYDPIGGSQPN-D-RFGAI-MQSN 250 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-S-SEEEEEEEECCCCSTT-C-CHHHH-HHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-C-CcEEEEEeccCCCCCc-c-hHHHH-HHHH
Confidence 987 22 1 2 57889999999999999999999999988 6 7888889988763222 1 12111 0011
Q ss_pred HHh-hccc--CCcccCCHHHHHHHHHHcCCc
Q 018565 309 MVM-MAHT--NKGKERSLKEWDYVLRQAGFS 336 (354)
Q Consensus 309 l~~-~~~~--~~g~~~t~~e~~~ll~~aGf~ 336 (354)
+.. .... ......+.++..+.|.++||+
T Consensus 251 l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 251 LKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred hhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 111 1110 112345889999999999997
No 263
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.36 E-value=9.4e-07 Score=88.34 Aligned_cols=97 Identities=10% Similarity=0.122 Sum_probs=74.0
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-------C-CCeEEeecCCCC--C--CCcceEEEecc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-------C-HGVEHVGGDMFD--G--VPEADAAIIKW 255 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~-~~v~~~~~d~~~--~--~~~~D~i~~~~ 255 (354)
++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++ . ++++++.+|.++ + ...||+|++.-
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 46799999999999999988853 346999999 888888765 2 489999999987 2 23599999854
Q ss_pred ccc--------cCC-hHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 256 VLH--------DWG-DDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 256 ~lh--------~~~-~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
..+ .+. .....++++.+.+.|+| ||.|++..
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkp-gG~L~~s~ 657 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA-GGTIMFSN 657 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEE-EEEEEEEE
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCC-CcEEEEEE
Confidence 321 111 23567889999999999 99888644
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.33 E-value=5.1e-07 Score=78.96 Aligned_cols=87 Identities=13% Similarity=0.148 Sum_probs=62.6
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CCC----
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GVP---- 246 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~---- 246 (354)
..+++.+. ..+..+|||||||+|.++..++++. .+++++|+ +.+++.+++ .++++++.+|+.+ +++
T Consensus 19 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~ 94 (255)
T 3tqs_A 19 QKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKT 94 (255)
T ss_dssp HHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCC
T ss_pred HHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhcc
Confidence 34455555 5667899999999999999999874 68999999 888888765 3789999999998 543
Q ss_pred --cceEEEeccccccCChHHHHHHH
Q 018565 247 --EADAAIIKWVLHDWGDDECIKIL 269 (354)
Q Consensus 247 --~~D~i~~~~~lh~~~~~~~~~~L 269 (354)
++| ++.|.-++.+.+-..++|
T Consensus 95 ~~~~~--vv~NlPY~is~~il~~ll 117 (255)
T 3tqs_A 95 DKPLR--VVGNLPYNISTPLLFHLF 117 (255)
T ss_dssp SSCEE--EEEECCHHHHHHHHHHHH
T ss_pred CCCeE--EEecCCcccCHHHHHHHH
Confidence 255 444544444443333333
No 265
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.32 E-value=3.1e-07 Score=81.46 Aligned_cols=84 Identities=18% Similarity=0.148 Sum_probs=61.2
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCC--CeEEEeec-hHHhhhccc--CCCeEEeecCCCC-CCCc-c-
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPR--IRGINFDL-PHVVCVAEK--CHGVEHVGGDMFD-GVPE-A- 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~-~~~~-~- 248 (354)
+.+++.+. ..+..+|||||||+|.++..++++.+. .+++++|+ +.+++.+++ ..+++++.+|+.+ +++. +
T Consensus 32 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~~~~ 109 (279)
T 3uzu_A 32 DAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGSIAR 109 (279)
T ss_dssp HHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGGGSC
T ss_pred HHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhHhcc
Confidence 34444444 556789999999999999999998653 45999999 888888875 3689999999998 6554 2
Q ss_pred -----eEEEeccccccCCh
Q 018565 249 -----DAAIIKWVLHDWGD 262 (354)
Q Consensus 249 -----D~i~~~~~lh~~~~ 262 (354)
...++.|.-++.+.
T Consensus 110 ~~~~~~~~vv~NlPY~iss 128 (279)
T 3uzu_A 110 PGDEPSLRIIGNLPYNISS 128 (279)
T ss_dssp SSSSCCEEEEEECCHHHHH
T ss_pred cccCCceEEEEccCccccH
Confidence 24455555444333
No 266
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.32 E-value=1.4e-06 Score=77.19 Aligned_cols=98 Identities=17% Similarity=0.139 Sum_probs=75.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc-----------CCCeEEeecCCCCC----CCcceEE
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK-----------CHGVEHVGGDMFDG----VPEADAA 251 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~----~~~~D~i 251 (354)
+++.+||-||+|.|..+.++++..|..+++.+|+ +.+++.+++ .+|++++.+|..+- ...||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4678999999999999999999777778999999 888887754 58999999999872 2249999
Q ss_pred EeccccccCChH--HHHHHHHHHHHhcCCCCceEEEE
Q 018565 252 IIKWVLHDWGDD--ECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 252 ~~~~~lh~~~~~--~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
+.-..=..-+.. --..+++.++++|+| ||.++..
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p-~Gv~v~q 197 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNP-GGIFVAQ 197 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEE-EEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCC-CCEEEEe
Confidence 874321110110 124789999999999 8877764
No 267
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.31 E-value=3.3e-06 Score=79.38 Aligned_cols=89 Identities=16% Similarity=0.045 Sum_probs=66.7
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCCCC-cceEEEeccccccC
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDGVP-EADAAIIKWVLHDW 260 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~~~-~~D~i~~~~~lh~~ 260 (354)
+..+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ .. +++..+|+.+..+ .||+|++.-.-...
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRAGL 366 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTTCS
T ss_pred CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCccch
Confidence 5679999999999999999886 458999999 888888765 23 9999999988433 69999985432211
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEEEE
Q 018565 261 GDDECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 261 ~~~~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
. ..+++.+. .|+| +|.+++.
T Consensus 367 ~----~~~~~~l~-~l~p-~givyvs 386 (425)
T 2jjq_A 367 H----PRLVKRLN-REKP-GVIVYVS 386 (425)
T ss_dssp C----HHHHHHHH-HHCC-SEEEEEE
T ss_pred H----HHHHHHHH-hcCC-CcEEEEE
Confidence 1 13455554 4899 8877774
No 268
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.30 E-value=2.3e-06 Score=74.34 Aligned_cols=106 Identities=8% Similarity=-0.029 Sum_probs=66.3
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeech-HHhhhccc----CCCeEEeecCCCC-CC--Ccc
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLP-HVVCVAEK----CHGVEHVGGDMFD-GV--PEA 248 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~----~~~v~~~~~d~~~-~~--~~~ 248 (354)
.++.+... +.+..+|||+|||+|.++..++++.+...++++|+. ........ ..++.....++.. .+ .++
T Consensus 64 ~ei~ek~~--l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~ 141 (277)
T 3evf_A 64 RWFHERGY--VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKC 141 (277)
T ss_dssp HHHHHTTS--SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCC
T ss_pred HHHHHhCC--CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCc
Confidence 34444433 677789999999999999998887655566666662 22111111 1133444444322 33 359
Q ss_pred eEEEeccccc---cCChH-HHHHHHHHHHHhcCCCC-ceEEE
Q 018565 249 DAAIIKWVLH---DWGDD-ECIKILKNCKEAITKDK-GKVII 285 (354)
Q Consensus 249 D~i~~~~~lh---~~~~~-~~~~~L~~~~~~L~p~g-G~lli 285 (354)
|+|++....+ .+-|. ....+|+.+.++|+| | |.+++
T Consensus 142 DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~Lkp-G~G~FV~ 182 (277)
T 3evf_A 142 DTLLCDIGESSSSSVTEGERTVRVLDTVEKWLAC-GVDNFCV 182 (277)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTT-CCSEEEE
T ss_pred cEEEecCccCcCchHHHHHHHHHHHHHHHHHhCC-CCCeEEE
Confidence 9999976555 12122 334568999999999 9 98877
No 269
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.25 E-value=1.6e-05 Score=72.51 Aligned_cols=151 Identities=14% Similarity=0.143 Sum_probs=91.4
Q ss_pred CCCceEEEecCCccHHHHHHHHH----------------CCCCeEEEeech-HHhhhc-cc------CCC---eEEeecC
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKA----------------FPRIRGINFDLP-HVVCVA-EK------CHG---VEHVGGD 240 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~----------------~p~~~~~~~D~~-~~~~~a-~~------~~~---v~~~~~d 240 (354)
+...+|+|+||++|..+..++.. .|.++++.-|+| +....+ +. ..+ +.-+++.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 45678999999999776654332 567788899984 222211 11 012 2235678
Q ss_pred CCC-CCC--cceEEEeccccccCCh-------------------------------HHHHHHHHHHHHhcCCCCceEEEE
Q 018565 241 MFD-GVP--EADAAIIKWVLHDWGD-------------------------------DECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 241 ~~~-~~~--~~D~i~~~~~lh~~~~-------------------------------~~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
|.. .+| ++|+++.+.+||-.++ .+...+|+..++.|+| ||++++.
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p-GG~mvl~ 208 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP-GGRMVLT 208 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT-TCEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEE
Confidence 877 566 4999999999995432 1234569999999999 9999987
Q ss_pred eeeeCCCCCCCcc-----hh-hhhhhccHHhhcc---------cCCcccCCHHHHHHHHHHcCC-ceeEE
Q 018565 287 EAIIEEDDGVDNK-----FK-SVRLMLDMVMMAH---------TNKGKERSLKEWDYVLRQAGF-SRYNI 340 (354)
Q Consensus 287 e~~~~~~~~~~~~-----~~-~~~~~~~l~~~~~---------~~~g~~~t~~e~~~ll~~aGf-~~~~~ 340 (354)
-...++... ... +. ....+.++..... ......++.+|++.+++++|. ++.+.
T Consensus 209 ~~gr~~~~~-~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 209 ILGRRSEDR-ASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp EEECSSSSS-SSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred EecCCCCCc-cccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 776654321 000 00 0011111111000 012245689999999999965 66554
No 270
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.25 E-value=2.2e-06 Score=83.72 Aligned_cols=127 Identities=11% Similarity=0.076 Sum_probs=86.4
Q ss_pred ChhHHHhhChHHHHHHHHHhhhchhhhHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHH----C---------CCCe
Q 018565 149 DVWSYAAADAAHSKLINDAMACDTRLAMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKA----F---------PRIR 215 (354)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~----~---------p~~~ 215 (354)
..|+.+++++-+-..|.+|+.... ..+... ......|+|||||+|-++...+++ . ...+
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~al----~d~~~~----~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~k 448 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGAL----KDLGAD----GRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVK 448 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHH----HHHHTT----CCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEE
T ss_pred HHHHHHcCChhhHHHHHHHHHHHH----HHhhcc----cCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccE
Confidence 458888899988888888876531 111110 123578999999999997543222 1 2347
Q ss_pred EEEeec-hHHhhhccc------CCCeEEeecCCCC-CC------C-cceEEEeccccccCChHHHHHHHHHHHHhcCCCC
Q 018565 216 GINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GV------P-EADAAIIKWVLHDWGDDECIKILKNCKEAITKDK 280 (354)
Q Consensus 216 ~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~------~-~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~g 280 (354)
+++++. +.++...+. .++|+++.+|+.+ .. + .+|+|+.-..=.....+.....|..+.+.||| |
T Consensus 449 VyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp-~ 527 (745)
T 3ua3_A 449 LYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKP-T 527 (745)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCT-T
T ss_pred EEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCC-C
Confidence 899998 444333221 6889999999998 44 3 59999987765444455566788888999999 8
Q ss_pred ceEE
Q 018565 281 GKVI 284 (354)
Q Consensus 281 G~ll 284 (354)
|.++
T Consensus 528 Gi~i 531 (745)
T 3ua3_A 528 TISI 531 (745)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 8543
No 271
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.20 E-value=1.3e-06 Score=76.30 Aligned_cols=89 Identities=8% Similarity=0.005 Sum_probs=62.5
Q ss_pred HHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC-CCCc---
Q 018565 177 RAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD-GVPE--- 247 (354)
Q Consensus 177 ~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~-~~~~--- 247 (354)
..+++.+. ..+..+|||||||+|.++. +. +.+..+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 11 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~ 86 (252)
T 1qyr_A 11 DSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE 86 (252)
T ss_dssp HHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHH
T ss_pred HHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhc
Confidence 34444444 5567899999999999999 54 444444999999 899988876 2489999999988 5442
Q ss_pred ---ceEEEeccccccCChHHHHHHH
Q 018565 248 ---ADAAIIKWVLHDWGDDECIKIL 269 (354)
Q Consensus 248 ---~D~i~~~~~lh~~~~~~~~~~L 269 (354)
.+.++++|.-++.+.+-..+++
T Consensus 87 ~~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 87 KMGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp HHTSCEEEEEECCTTTHHHHHHHHH
T ss_pred ccCCceEEEECCCCCccHHHHHHHH
Confidence 2356666666665555444444
No 272
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.10 E-value=2.1e-06 Score=79.41 Aligned_cols=87 Identities=8% Similarity=0.076 Sum_probs=64.0
Q ss_pred CceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------CCCeEEeecCCCCC---C--------------
Q 018565 190 IETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFDG---V-------------- 245 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~---~-------------- 245 (354)
+.+|||+|||+|.++..+++. ..+++++|. +.+++.+++ .++++++.+|..+- .
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 468999999999999998875 358999999 888887764 35899999998651 1
Q ss_pred --CcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 246 --PEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 246 --~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
..||+|++.-.-. .+..++.+.|+| +|+++++.
T Consensus 292 ~~~~fD~Vv~dPPr~--------g~~~~~~~~l~~-~g~ivyvs 326 (369)
T 3bt7_A 292 KSYQCETIFVDPPRS--------GLDSETEKMVQA-YPRILYIS 326 (369)
T ss_dssp GGCCEEEEEECCCTT--------CCCHHHHHHHTT-SSEEEEEE
T ss_pred ccCCCCEEEECcCcc--------ccHHHHHHHHhC-CCEEEEEE
Confidence 1589998732211 233455566677 88888764
No 273
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.09 E-value=4.4e-06 Score=72.66 Aligned_cols=107 Identities=14% Similarity=0.099 Sum_probs=69.8
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCC-eEEeec-CCCC-CCCc
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHG-VEHVGG-DMFD-GVPE 247 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~-v~~~~~-d~~~-~~~~ 247 (354)
..++.+.+. +.+..+|||+|||.|.++..++++.+-..++++|+ ......+.. ..+ +.+... |+.. +...
T Consensus 79 L~ei~eK~~--Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~ 156 (282)
T 3gcz_A 79 LRWMEERGY--VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIP 156 (282)
T ss_dssp HHHHHHTTS--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCC
T ss_pred HHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCC
Confidence 445666654 77888999999999999999988777667788887 332222211 122 333322 4443 3335
Q ss_pred ceEEEeccccc----cCChHHHHHHHHHHHHhcCCCC--ceEEE
Q 018565 248 ADAAIIKWVLH----DWGDDECIKILKNCKEAITKDK--GKVII 285 (354)
Q Consensus 248 ~D~i~~~~~lh----~~~~~~~~~~L~~~~~~L~p~g--G~lli 285 (354)
+|+|++-...+ ..+......+|+-+.++|+| | |.+++
T Consensus 157 ~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~-g~~G~Fv~ 199 (282)
T 3gcz_A 157 GDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQE-GNYTEFCI 199 (282)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHH-HCCCEEEE
T ss_pred cCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCC-CCCCcEEE
Confidence 99999976665 11222334578888899999 8 88776
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.08 E-value=7.4e-06 Score=71.71 Aligned_cols=71 Identities=13% Similarity=0.084 Sum_probs=55.1
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-h-------HHhhhccc-------CCCeEEeecCCCC--C-C---
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-P-------HVVCVAEK-------CHGVEHVGGDMFD--G-V--- 245 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~-------~~~~~a~~-------~~~v~~~~~d~~~--~-~--- 245 (354)
..+..+|||+|||+|..+..+++. +.+++++|+ + .+++.++. ..+++++.+|..+ + +
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 345679999999999999999986 568999999 7 77776653 3569999999876 2 3
Q ss_pred -CcceEEEecccccc
Q 018565 246 -PEADAAIIKWVLHD 259 (354)
Q Consensus 246 -~~~D~i~~~~~lh~ 259 (354)
..||+|++.-.+++
T Consensus 159 ~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 159 QGKPDIVYLDPMYPE 173 (258)
T ss_dssp HCCCSEEEECCCC--
T ss_pred CCCccEEEECCCCCC
Confidence 45999999655543
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.06 E-value=1.4e-05 Score=79.91 Aligned_cols=110 Identities=13% Similarity=-0.007 Sum_probs=77.1
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHH------------------------------------------CCC
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKA------------------------------------------FPR 213 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~------------------------------------------~p~ 213 (354)
+..++.... +.+...|||.+||+|.+++..+.. .+.
T Consensus 179 Aa~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 179 AAAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 344455445 456789999999999999887764 233
Q ss_pred CeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-CCC----cceEEEecccccc-C-ChHHHHHHHHHHHHhc--
Q 018565 214 IRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-GVP----EADAAIIKWVLHD-W-GDDECIKILKNCKEAI-- 276 (354)
Q Consensus 214 ~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~----~~D~i~~~~~lh~-~-~~~~~~~~L~~~~~~L-- 276 (354)
.+++++|+ +.+++.|+. .+.+++..+|+.+ ..| .||+|+++-.... + ..+....+.+.+.+.|
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~ 336 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKN 336 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHh
Confidence 68999999 999988775 3569999999987 222 5899999744332 1 2334555666555554
Q ss_pred -CCCCceEEEEee
Q 018565 277 -TKDKGKVIIVEA 288 (354)
Q Consensus 277 -~p~gG~lli~e~ 288 (354)
.| ||+++|+..
T Consensus 337 ~~~-g~~~~ilt~ 348 (703)
T 3v97_A 337 QFG-GWNLSLFSA 348 (703)
T ss_dssp HCT-TCEEEEEES
T ss_pred hCC-CCeEEEEeC
Confidence 47 999998753
No 276
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.00 E-value=9.1e-06 Score=63.48 Aligned_cols=83 Identities=16% Similarity=0.084 Sum_probs=59.7
Q ss_pred CCCceEEEecCCcc-HHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCCCCC----cceEEEeccccccCC
Q 018565 188 DGIETLVDIGGNDG-TTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFDGVP----EADAAIIKWVLHDWG 261 (354)
Q Consensus 188 ~~~~~vLDvG~G~G-~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~----~~D~i~~~~~lh~~~ 261 (354)
.+..++||||||+| ..+..|++. .+..++++|+ |..++ ++..|+|+|.. +||+|...+.
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIYsirP----- 98 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIYSIRP----- 98 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEEEESC-----
T ss_pred CCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc---------eEEccCCCCcccccCCcCEEEEcCC-----
Confidence 35679999999999 588888764 4788999998 54443 88899999644 6999988763
Q ss_pred hHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 262 DDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 262 ~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
+.+...-+.++.+.. |.-++|.-.
T Consensus 99 P~El~~~i~~lA~~v---~adliI~pL 122 (153)
T 2k4m_A 99 PAEIHSSLMRVADAV---GARLIIKPL 122 (153)
T ss_dssp CTTTHHHHHHHHHHH---TCEEEEECB
T ss_pred CHHHHHHHHHHHHHc---CCCEEEEcC
Confidence 444555566666554 456666543
No 277
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.00 E-value=6.9e-06 Score=75.95 Aligned_cols=92 Identities=8% Similarity=-0.030 Sum_probs=70.7
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----C-----------------CCeEEeecCCCCC--
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----C-----------------HGVEHVGGDMFDG-- 244 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~-----------------~~v~~~~~d~~~~-- 244 (354)
++.+|||+|||+|..+..++++.+..+++++|+ ++.++.+++ . .++++..+|..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 357999999999999999999988888999999 877776653 1 2388999998762
Q ss_pred -C-CcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 245 -V-PEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 245 -~-~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
. ..||+|++.- .. . ...++..+.+.|+| ||.+++..
T Consensus 127 ~~~~~fD~I~lDP-~~---~--~~~~l~~a~~~lk~-gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP-FG---S--PMEFLDTALRSAKR-RGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC-SS---C--CHHHHHHHHHHEEE-EEEEEEEE
T ss_pred hccCCCCEEEeCC-CC---C--HHHHHHHHHHhcCC-CCEEEEEe
Confidence 2 2599999532 11 1 24788999999999 99777654
No 278
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.99 E-value=9.8e-06 Score=70.79 Aligned_cols=96 Identities=18% Similarity=0.177 Sum_probs=63.2
Q ss_pred CCceEEEecCCccHHHHHHHHH-------CCC-----CeEEEeec-h---HHhh-----------hccc-----------
Q 018565 189 GIETLVDIGGNDGTTLRTLTKA-------FPR-----IRGINFDL-P---HVVC-----------VAEK----------- 230 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~-------~p~-----~~~~~~D~-~---~~~~-----------~a~~----------- 230 (354)
+..+|||||+|+|..+..+++. .|+ ++++.++. | +.+. .++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999988887654 674 57888886 4 2222 1110
Q ss_pred ---------CCCeEEeecCCCC--C-CC-----cceEEEeccc-cccCChHHHHHHHHHHHHhcCCCCceEEE
Q 018565 231 ---------CHGVEHVGGDMFD--G-VP-----EADAAIIKWV-LHDWGDDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 231 ---------~~~v~~~~~d~~~--~-~~-----~~D~i~~~~~-lh~~~~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
..++++..+|..+ + .+ .||+|++--. -..-|+-.-..+|+.+++.|+| ||.++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~p-GG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARP-GGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEE-EEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCC-CcEEEE
Confidence 2457788899866 2 22 5899998421 1100110124789999999999 988763
No 279
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.97 E-value=1.6e-05 Score=77.12 Aligned_cols=99 Identities=14% Similarity=0.135 Sum_probs=73.1
Q ss_pred CCCceEEEecCCccHHHHHHHHHCC------------------CCeEEEeec-hHHhhhccc------CCC-----eEEe
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFP------------------RIRGINFDL-PHVVCVAEK------CHG-----VEHV 237 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p------------------~~~~~~~D~-~~~~~~a~~------~~~-----v~~~ 237 (354)
.+..+|+|.+||+|.++..+.+... ..+++++|+ +.++..++. ... +.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 4567999999999999988876431 247999999 888777653 222 7889
Q ss_pred ecCCCC-C---CCcceEEEeccccccCCh------------HHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 238 GGDMFD-G---VPEADAAIIKWVLHDWGD------------DECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 238 ~~d~~~-~---~~~~D~i~~~~~lh~~~~------------~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
.+|.+. + .+.||+|+++-.+..... ..-..++.++.+.|+| ||++.++-
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~-gGr~a~V~ 312 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHP-GGRAAVVV 312 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEE-EEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCC-CCEEEEEe
Confidence 999987 3 246999999765543211 1224789999999999 99998864
No 280
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.97 E-value=2.8e-05 Score=69.89 Aligned_cols=67 Identities=13% Similarity=0.134 Sum_probs=54.3
Q ss_pred cCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhccc------CCCeEEeecCCCC-CC-----CcceEEE
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEK------CHGVEHVGGDMFD-GV-----PEADAAI 252 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~-----~~~D~i~ 252 (354)
..++.+|||+|||+|..+..+++.. +..+++++|+ ++.++.+++ ..+++++.+|+.+ +. ..||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 4567899999999999999999874 5678999999 887777664 3579999999876 21 3589998
Q ss_pred e
Q 018565 253 I 253 (354)
Q Consensus 253 ~ 253 (354)
+
T Consensus 180 ~ 180 (309)
T 2b9e_A 180 L 180 (309)
T ss_dssp E
T ss_pred E
Confidence 7
No 281
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.93 E-value=1.1e-05 Score=74.86 Aligned_cols=92 Identities=9% Similarity=0.019 Sum_probs=71.1
Q ss_pred CCceEEEecCCccHHHHHHHHHCCC-CeEEEeec-hHHhhhccc-------CCC-eEEeecCCCC--C--CC-cceEEEe
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPR-IRGINFDL-PHVVCVAEK-------CHG-VEHVGGDMFD--G--VP-EADAAII 253 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~-------~~~-v~~~~~d~~~--~--~~-~~D~i~~ 253 (354)
++.+|||++||+|.+++.++++.++ .+++++|+ +..++.+++ .++ ++++.+|.++ . .+ .||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 5689999999999999999998665 57899999 888887765 244 9999999865 2 22 4999998
Q ss_pred ccccccCChHHHHHHHHHHHHhcCCCCceEEEEe
Q 018565 254 KWVLHDWGDDECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 254 ~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
.- . .. ...+++.+.+.|+| ||.|++..
T Consensus 132 DP--~--g~--~~~~l~~a~~~Lk~-gGll~~t~ 158 (392)
T 3axs_A 132 DP--F--GT--PVPFIESVALSMKR-GGILSLTA 158 (392)
T ss_dssp CC--S--SC--CHHHHHHHHHHEEE-EEEEEEEE
T ss_pred CC--C--cC--HHHHHHHHHHHhCC-CCEEEEEe
Confidence 54 1 11 13588899999999 99776654
No 282
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.80 E-value=0.00014 Score=66.23 Aligned_cols=92 Identities=12% Similarity=0.018 Sum_probs=66.1
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhcccCCCeEEeecCCCC-CCC--cceEEEeccccccCChH
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFD-GVP--EADAAIIKWVLHDWGDD 263 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~i~~~~~lh~~~~~ 263 (354)
+.++.++||+||++|.++..++++ +.+++++|...+.......++|++..+|.+. ..+ ++|+|++-.+.+ ..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~---p~ 283 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK---PA 283 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC---HH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC---hH
Confidence 457899999999999999999987 6799999985555555557899999999998 332 499999977654 34
Q ss_pred HHHHHHHHHHHhcCCCCceEE
Q 018565 264 ECIKILKNCKEAITKDKGKVI 284 (354)
Q Consensus 264 ~~~~~L~~~~~~L~p~gG~ll 284 (354)
....++.+....... ++.++
T Consensus 284 ~~~~l~~~wl~~~~~-~~aI~ 303 (375)
T 4auk_A 284 KVAALMAQWLVNGWC-RETIF 303 (375)
T ss_dssp HHHHHHHHHHHTTSC-SEEEE
T ss_pred HhHHHHHHHHhcccc-ceEEE
Confidence 444444443333333 34433
No 283
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.77 E-value=9.6e-05 Score=73.51 Aligned_cols=99 Identities=12% Similarity=0.073 Sum_probs=69.8
Q ss_pred CCCceEEEecCCccHHHHHHHHHCC---CCeEEEeec-hHHhhhc--cc----------CCCeEEeecCCCCC----CCc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFP---RIRGINFDL-PHVVCVA--EK----------CHGVEHVGGDMFDG----VPE 247 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p---~~~~~~~D~-~~~~~~a--~~----------~~~v~~~~~d~~~~----~~~ 247 (354)
.+..+|+|.|||+|.++..+++..+ ..+++++|+ +.++..+ +. .....+...|++.+ ...
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 4568999999999999999998775 357899999 7777666 21 12235666777762 235
Q ss_pred ceEEEecccccc-CChH--------------------------HHHHHHHHHHHhcCCCCceEEEEe
Q 018565 248 ADAAIIKWVLHD-WGDD--------------------------ECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 248 ~D~i~~~~~lh~-~~~~--------------------------~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
||+|+++-.... +..+ ....++.++.+.|+| ||++.++-
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKp-GGrLAfIl 465 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQD-GTVISAIM 465 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCT-TCEEEEEE
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCC-CcEEEEEE
Confidence 999999655421 1111 123478889999999 99998854
No 284
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.75 E-value=6.4e-05 Score=65.83 Aligned_cols=99 Identities=11% Similarity=0.023 Sum_probs=64.1
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----C-CCeEEeec-CCCC-CCCcceEEEeccccc
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----C-HGVEHVGG-DMFD-GVPEADAAIIKWVLH 258 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~-~~v~~~~~-d~~~-~~~~~D~i~~~~~lh 258 (354)
+.+..+|||+||++|.++..++++.+-..++++|+ ......... . +-+.+..+ |++. +...+|+|++....+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~APn 158 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGES 158 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcCC
Confidence 56789999999999999999998766556778887 222111110 1 22333333 5544 333599999865554
Q ss_pred ----cCChHHHHHHHHHHHHhcCCCC-ceEEEE
Q 018565 259 ----DWGDDECIKILKNCKEAITKDK-GKVIIV 286 (354)
Q Consensus 259 ----~~~~~~~~~~L~~~~~~L~p~g-G~lli~ 286 (354)
..+......+|.-+.++|+| | |.+++=
T Consensus 159 sG~~~~D~~rs~~LL~~A~~~Lkp-G~G~FV~K 190 (300)
T 3eld_A 159 SSNPLVERDRTMKVLENFERWKHV-NTENFCVK 190 (300)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCT-TCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcC-CCCcEEEE
Confidence 11111235668888999999 9 987773
No 285
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.72 E-value=2.9e-05 Score=75.24 Aligned_cols=96 Identities=14% Similarity=0.126 Sum_probs=68.8
Q ss_pred ceEEEecCCccHHHHHHHHHCC---------------CCeEEEeec-hHHhhhccc-------CCCeEEeecCCCC-C-C
Q 018565 191 ETLVDIGGNDGTTLRTLTKAFP---------------RIRGINFDL-PHVVCVAEK-------CHGVEHVGGDMFD-G-V 245 (354)
Q Consensus 191 ~~vLDvG~G~G~~~~~l~~~~p---------------~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~-~ 245 (354)
.+|+|.+||+|.++..+.+..+ ..+++++|+ +.++..++. ..++.+..+|.+. + .
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 4999999999999888765332 467899999 878777663 2345558889887 3 2
Q ss_pred C--cceEEEecccccc--CChH-------------------------HHHHHHHHHHHhcCCCCceEEEEe
Q 018565 246 P--EADAAIIKWVLHD--WGDD-------------------------ECIKILKNCKEAITKDKGKVIIVE 287 (354)
Q Consensus 246 ~--~~D~i~~~~~lh~--~~~~-------------------------~~~~~L~~~~~~L~p~gG~lli~e 287 (354)
+ .||+|+++-.... |..+ .-..++.++.+.|+| ||++.++-
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~-gGr~aiVl 395 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP-TGSMALLL 395 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE-EEEEEEEE
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc-CceEEEEe
Confidence 2 4999999654432 2211 112689999999999 99988764
No 286
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.70 E-value=0.00058 Score=61.75 Aligned_cols=146 Identities=17% Similarity=0.197 Sum_probs=103.6
Q ss_pred CCceEEEecCCccHHHHHHHHH-CCCCeEEEeechHHhhhcc-----------------------------cCCCeEEee
Q 018565 189 GIETLVDIGGNDGTTLRTLTKA-FPRIRGINFDLPHVVCVAE-----------------------------KCHGVEHVG 238 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~-~p~~~~~~~D~~~~~~~a~-----------------------------~~~~v~~~~ 238 (354)
+...||-+|||.=.....+... .+++++.-+|.|++++.-+ ...+.+++.
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 4689999999999988888765 3678899999988876321 146889999
Q ss_pred cCCCCC--C---------C-c-ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhh
Q 018565 239 GDMFDG--V---------P-E-ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRL 305 (354)
Q Consensus 239 ~d~~~~--~---------~-~-~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~ 305 (354)
.|+.+. . . + .-++++-.++.+++.+++.++|+.+.+..++ |.+++.|.+.+.+. + ..
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~--~~~i~yE~i~p~d~-----f---g~ 239 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER--AMFINYEQVNMGDR-----F---GQ 239 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS--EEEEEEEECCTTSH-----H---HH
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC--ceEEEEeccCCCCH-----H---HH
Confidence 999761 1 1 1 4478888999999999999999999998865 77778898854321 1 11
Q ss_pred hccHHhhcc--cCCc--ccCCHHHHHHHHHHcCCceeEEEEcC
Q 018565 306 MLDMVMMAH--TNKG--KERSLKEWDYVLRQAGFSRYNITSIH 344 (354)
Q Consensus 306 ~~~l~~~~~--~~~g--~~~t~~e~~~ll~~aGf~~~~~~~~~ 344 (354)
.+--++... ...+ ...+.++..+.|.++||+.++++++.
T Consensus 240 ~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~~ 282 (334)
T 3iei_A 240 IMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMM 282 (334)
T ss_dssp HHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEHH
T ss_pred HHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecHH
Confidence 111111111 0011 23477888999999999998877653
No 287
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.66 E-value=0.0001 Score=67.32 Aligned_cols=97 Identities=16% Similarity=0.057 Sum_probs=71.4
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--------------CCCeEEeecCCCCC-------C
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--------------CHGVEHVGGDMFDG-------V 245 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------------~~~v~~~~~d~~~~-------~ 245 (354)
.++.+||=||+|.|..+.++++. |.-+++.+|+ |.+++.+++ .+|++++.+|...- .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 35689999999999999999985 5578999999 889887764 25689999987651 2
Q ss_pred CcceEEEeccccccC-------C-hHHHHHHHHHHHHhcCCCCceEEEE
Q 018565 246 PEADAAIIKWVLHDW-------G-DDECIKILKNCKEAITKDKGKVIIV 286 (354)
Q Consensus 246 ~~~D~i~~~~~lh~~-------~-~~~~~~~L~~~~~~L~p~gG~lli~ 286 (354)
..||+|+.-..-... . .--..++++.++++|+| ||.++..
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p-~GVlv~Q 330 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ-DGKYFTQ 330 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE-EEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCC-CCEEEEe
Confidence 359999875321110 0 11235788999999999 8877653
No 288
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.64 E-value=7.9e-05 Score=64.99 Aligned_cols=71 Identities=11% Similarity=0.125 Sum_probs=53.0
Q ss_pred cCCC--ceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHH-------hhhccc-----C---CCeEEeecCCCC--C-C
Q 018565 187 FDGI--ETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHV-------VCVAEK-----C---HGVEHVGGDMFD--G-V 245 (354)
Q Consensus 187 ~~~~--~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~-------~~~a~~-----~---~~v~~~~~d~~~--~-~ 245 (354)
..++ .+|||+|||+|..+..++++ +.+++++|. +.+ ++.++. . .+++++.+|..+ + .
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~ 161 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI 161 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC
Confidence 4455 79999999999999999998 568999999 644 332221 1 579999999876 2 3
Q ss_pred C-cceEEEecccccc
Q 018565 246 P-EADAAIIKWVLHD 259 (354)
Q Consensus 246 ~-~~D~i~~~~~lh~ 259 (354)
+ +||+|++.-..+.
T Consensus 162 ~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 162 TPRPQVVYLDPMFPH 176 (258)
T ss_dssp SSCCSEEEECCCCCC
T ss_pred cccCCEEEEcCCCCC
Confidence 3 5999999766654
No 289
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.64 E-value=1.6e-05 Score=89.71 Aligned_cols=142 Identities=13% Similarity=0.144 Sum_probs=65.8
Q ss_pred CCceEEEecCCccHHHHHHHHHCC-----CCeEEEeec-hHHhhhcccC---CCeEEeecCCCCC---CC-cceEEEecc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFP-----RIRGINFDL-PHVVCVAEKC---HGVEHVGGDMFDG---VP-EADAAIIKW 255 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p-----~~~~~~~D~-~~~~~~a~~~---~~v~~~~~d~~~~---~~-~~D~i~~~~ 255 (354)
+..+||+||+|+|..+..+++... ..+++..|+ +...+.+++. -.++....|..++ .+ .||+|++++
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 467999999999987776666543 235777787 5555555531 1233322233332 12 499999999
Q ss_pred ccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHHHHcCC
Q 018565 256 VLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVLRQAGF 335 (354)
Q Consensus 256 ~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll~~aGf 335 (354)
+||.-+ +....|+++++.||| ||++++.+........ . ...+.... .. ..+...+.++|.++|.++||
T Consensus 1320 vl~~t~--~~~~~l~~~~~lL~p-~G~l~~~e~~~~~~~g-~-----~~~~~~~~--~r-~~~~~~~~~~w~~~l~~~gf 1387 (2512)
T 2vz8_A 1320 ALATLG--DPAVAVGNMAATLKE-GGFLLLHTLLAGHPLG-E-----MVGFLTSP--EQ-GGRHLLSQDQWESLFAGASL 1387 (2512)
T ss_dssp C-----------------------CCEEEEEEC-----------------------------------CTTTTSSTTTTE
T ss_pred cccccc--cHHHHHHHHHHhcCC-CcEEEEEecccccccc-c-----cccccccc--cc-cCCcccCHHHHHHHHHhCCC
Confidence 999633 445789999999999 9999998754311000 0 00000000 00 11233567899999999999
Q ss_pred ceeEEEE
Q 018565 336 SRYNITS 342 (354)
Q Consensus 336 ~~~~~~~ 342 (354)
+.+....
T Consensus 1388 ~~~~~~~ 1394 (2512)
T 2vz8_A 1388 HLVALKR 1394 (2512)
T ss_dssp EEEEEEE
T ss_pred ceeeecc
Confidence 9877643
No 290
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=97.62 E-value=3.1e-05 Score=52.65 Aligned_cols=55 Identities=13% Similarity=0.198 Sum_probs=46.5
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
+..|++.|...+.|+|..|||+.+|++...+.+.|..|...|++.... .+.|+++
T Consensus 12 ~~~IL~~L~~~~~~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I~~~~----~G~y~lg 66 (67)
T 2heo_A 12 EQKILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSSPS----PKYWSIG 66 (67)
T ss_dssp HHHHHHHHHHHCSCEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEEEE----TTEEEEC
T ss_pred HHHHHHHHHHcCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEecCC----CceEeeC
Confidence 556788887544689999999999999999999999999999998755 3788765
No 291
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=97.55 E-value=9.9e-05 Score=53.98 Aligned_cols=63 Identities=14% Similarity=0.071 Sum_probs=54.3
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSR 101 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~ 101 (354)
..++....++.|+..| . ++.|+.+||+.+|+++..+.+.|+.|...|++.... +.|++|+.++
T Consensus 25 ~~~l~~~~r~~Il~~L-~--~~~~~~eLa~~l~is~~tv~~~L~~L~~~Glv~~~~-----g~y~l~~~g~ 87 (96)
T 1y0u_A 25 NYAVTNPVRRKILRML-D--KGRSEEEIMQTLSLSKKQLDYHLKVLEAGFCIERVG-----ERWVVTDAGK 87 (96)
T ss_dssp HHHHSCHHHHHHHHHH-H--TTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-----TEEEECTTTC
T ss_pred HHHhCCHHHHHHHHHH-c--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEC-----CEEEECCCch
Confidence 3445555678899999 6 799999999999999999999999999999999876 5899998764
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.54 E-value=0.00041 Score=59.39 Aligned_cols=107 Identities=14% Similarity=0.116 Sum_probs=63.4
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeechH---HhhhcccCCCe---EEeec-CCCCCC-Cc
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPH---VVCVAEKCHGV---EHVGG-DMFDGV-PE 247 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~---~~~~a~~~~~v---~~~~~-d~~~~~-~~ 247 (354)
..++.+.. .+.+..+|||+||+.|.++...+++-+-..+.+.++.- ..........+ .|..+ ||++.. .+
T Consensus 62 L~EIdeK~--likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~ 139 (269)
T 2px2_A 62 LRWLVERR--FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKPSEI 139 (269)
T ss_dssp HHHHHHTT--SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSCCCC
T ss_pred HHHHHHcC--CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCCCCC
Confidence 34555554 37889999999999999999988852111223333311 11111101333 55557 999833 36
Q ss_pred ceEEEeccccc--cCC-hH-HHHHHHHHHHHhcCCCCc-eEEE
Q 018565 248 ADAAIIKWVLH--DWG-DD-ECIKILKNCKEAITKDKG-KVII 285 (354)
Q Consensus 248 ~D~i~~~~~lh--~~~-~~-~~~~~L~~~~~~L~p~gG-~lli 285 (354)
+|+|++-..-. +.. |. ....+|.-+.+.|+| || .+++
T Consensus 140 ~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~-gG~~Fvv 181 (269)
T 2px2_A 140 SDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSR-GPKEFCI 181 (269)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTT-CCSEEEE
T ss_pred CCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhc-CCcEEEE
Confidence 99999854332 111 11 223467777799999 99 6666
No 293
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.52 E-value=0.00087 Score=60.06 Aligned_cols=146 Identities=12% Similarity=0.011 Sum_probs=94.9
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhccc---------CCCeEEeecCCCCCC------C-----cc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEK---------CHGVEHVGGDMFDGV------P-----EA 248 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~---------~~~v~~~~~d~~~~~------~-----~~ 248 (354)
+...||++|||-=.....+.. .++++++-+|.|.+++..++ ..+..++..|+.+.+ . ..
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDW-PTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSAR 180 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCC-CTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSC
T ss_pred CCCeEEEeCCCCCchhhhccC-CCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCC
Confidence 456899999998877655542 12578999999988876542 567889999998631 1 13
Q ss_pred eEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccC--------Cccc
Q 018565 249 DAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTN--------KGKE 320 (354)
Q Consensus 249 D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~g~~ 320 (354)
-++++-.++|++++++..++++.+.+.+.| |+.| +.|.+.++... . ......... ..+...+ ....
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~-gs~l-~~d~~~~~~~~-~--~~~~~~~~~-~~~~~~g~~~~~~l~~~~~ 254 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAV-GSRI-AVETSPLHGDE-W--REQMQLRFR-RVSDALGFEQAVDVQELIY 254 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCT-TCEE-EEECCCTTCSH-H--HHHHHHHHH-HHHC-----------CCTT
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCC-CeEE-EEEecCCCCcc-h--hHHHHHHHH-HHHHHcCCcCCCCcccccc
Confidence 478888999999999999999999999888 6654 55655443211 0 000000000 0010001 1122
Q ss_pred -CC-HHHHHHHHHHcCCceeEEEE
Q 018565 321 -RS-LKEWDYVLRQAGFSRYNITS 342 (354)
Q Consensus 321 -~t-~~e~~~ll~~aGf~~~~~~~ 342 (354)
++ .++..++|.+.||+.+ .++
T Consensus 255 ~~~~~~~~~~~f~~~G~~~~-~~~ 277 (310)
T 2uyo_A 255 HDENRAVVADWLNRHGWRAT-AQS 277 (310)
T ss_dssp CCTTCCCHHHHHTTTTEEEE-EEE
T ss_pred CCCChHHHHHHHHHCcCccc-cCC
Confidence 25 7789999999999988 444
No 294
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.51 E-value=0.00047 Score=66.64 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=72.2
Q ss_pred CCceEEEecCCccHHHHHHHHHC---CCCeEEEeec-hHHhhhccc------C--CCeEEeecCCCCC-CC-----cceE
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAF---PRIRGINFDL-PHVVCVAEK------C--HGVEHVGGDMFDG-VP-----EADA 250 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~---p~~~~~~~D~-~~~~~~a~~------~--~~v~~~~~d~~~~-~~-----~~D~ 250 (354)
...+|+|.+||+|.++..+.+.. +..+++++|+ +.+...++. . +++.+..+|.+.. +| .||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 56799999999999999988874 3578999999 777777653 1 4678999999873 22 4999
Q ss_pred EEeccccc-cCCh--------------------HHHHHHHHHHHHhcC-CCCceEEEEe
Q 018565 251 AIIKWVLH-DWGD--------------------DECIKILKNCKEAIT-KDKGKVIIVE 287 (354)
Q Consensus 251 i~~~~~lh-~~~~--------------------~~~~~~L~~~~~~L~-p~gG~lli~e 287 (354)
|+++-... .|.. ..-..++.++.+.|+ | ||++.++-
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~-gGr~a~Vl 358 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQD-NGVMAIVL 358 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTT-TCEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCC-ceeEEEEe
Confidence 99863321 1210 011358999999999 9 99988754
No 295
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.49 E-value=5.7e-05 Score=70.19 Aligned_cols=64 Identities=19% Similarity=0.238 Sum_probs=52.7
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----C----CCeEEeecCCCCC--C---CcceEEEec
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----C----HGVEHVGGDMFDG--V---PEADAAIIK 254 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~----~~v~~~~~d~~~~--~---~~~D~i~~~ 254 (354)
++.+|||+|||+|..+..+++. ..+++++|+ +.+++.++. . ++++++.+|+.+. . ..||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4689999999999999998886 468999999 888887764 1 4799999999872 2 259999983
No 296
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.48 E-value=0.00059 Score=56.95 Aligned_cols=89 Identities=10% Similarity=0.096 Sum_probs=60.5
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---------CCCeEEeecCCCCC-------------
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---------CHGVEHVGGDMFDG------------- 244 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~~------------- 244 (354)
.+..+|||+||| ..+..+++ .++.+++.+|. ++..+.+++ .++|+++.+|..+.
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred hCCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 356899999985 55555665 45788999997 777666653 34799999985421
Q ss_pred --------------CCcceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEee
Q 018565 245 --------------VPEADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEA 288 (354)
Q Consensus 245 --------------~~~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~ 288 (354)
..+||+|++-.-- ....+..+.+.|+| ||.| ++|.
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k-------~~~~~~~~l~~l~~-GG~I-v~DN 154 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRF-------RVGCALATAFSITR-PVTL-LFDD 154 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSS-------HHHHHHHHHHHCSS-CEEE-EETT
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCC-------chhHHHHHHHhcCC-CeEE-EEeC
Confidence 1359999985421 12445556788999 8766 5554
No 297
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.47 E-value=0.00021 Score=62.47 Aligned_cols=75 Identities=19% Similarity=0.180 Sum_probs=59.7
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc--CCCeEEeecCCCC-C-------
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK--CHGVEHVGGDMFD-G------- 244 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~-~------- 244 (354)
.+++++.+. ..++..+||.+||.|..+..++++ +.+++++|. |.+++.+++ .+|++++.+||.+ +
T Consensus 11 l~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 11 YQEALDLLA--VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcC
Confidence 456666666 667889999999999999999998 779999999 888877654 2589999999976 2
Q ss_pred CCcceEEEec
Q 018565 245 VPEADAAIIK 254 (354)
Q Consensus 245 ~~~~D~i~~~ 254 (354)
..++|.|++.
T Consensus 87 ~~~vDgIL~D 96 (285)
T 1wg8_A 87 VERVDGILAD 96 (285)
T ss_dssp CSCEEEEEEE
T ss_pred CCCcCEEEeC
Confidence 1358888863
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.41 E-value=0.00053 Score=57.84 Aligned_cols=106 Identities=12% Similarity=0.063 Sum_probs=71.0
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhh--c-cc--CCCeEEeec-CCCC-CCCc
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCV--A-EK--CHGVEHVGG-DMFD-GVPE 247 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~--a-~~--~~~v~~~~~-d~~~-~~~~ 247 (354)
..++.+.+. +.+..+|||+||++|.++...+.+..-.++.++|+ +.-.+. . +. -+.|+|..+ |++. +..+
T Consensus 67 L~ei~ek~~--l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~ 144 (267)
T 3p8z_A 67 LQWFVERNM--VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEK 144 (267)
T ss_dssp HHHHHHTTS--SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCC
T ss_pred HHHHHHhcC--CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCcc
Confidence 455666664 67888999999999999998888766567999998 221111 1 11 367999999 9776 4456
Q ss_pred ceEEEeccccccCC---hH-HHHHHHHHHHHhcCCCCceEEE
Q 018565 248 ADAAIIKWVLHDWG---DD-ECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 248 ~D~i~~~~~lh~~~---~~-~~~~~L~~~~~~L~p~gG~lli 285 (354)
+|+|+|--.=..-. ++ ...++|.-+.++|++ + .++|
T Consensus 145 ~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~-~fc~ 184 (267)
T 3p8z_A 145 CDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-N-QFCI 184 (267)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-C-EEEE
T ss_pred ccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-C-CEEE
Confidence 99999853332111 11 224467777889997 5 4444
No 299
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=97.41 E-value=9.1e-05 Score=55.56 Aligned_cols=62 Identities=16% Similarity=0.138 Sum_probs=53.3
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHc--CCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccc-hhhc
Q 018565 39 ELGIAEAVEEKGSPITLNELASAL--KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSR-RLMR 105 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~--g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~-~l~~ 105 (354)
+..|++.|.+. ++.|+.+||+.+ |+++..+++.|+.|...|+++..+. +.|++|+.++ +|..
T Consensus 15 d~~IL~~L~~~-g~~s~~eLA~~l~~giS~~aVs~rL~~Le~~GLV~~~~r----g~Y~LT~~G~~~l~~ 79 (111)
T 3b73_A 15 DDRILEIIHEE-GNGSPKELEDRDEIRISKSSVSRRLKKLADHDLLQPLAN----GVYVITEEGEAYLNG 79 (111)
T ss_dssp HHHHHHHHHHH-SCBCHHHHHTSTTCCSCHHHHHHHHHHHHHTTSEEECST----TCEEECHHHHHHHTT
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEecCC----ceEEECchHHHHHHH
Confidence 45678888654 799999999999 9999999999999999999998863 6899999986 4443
No 300
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.32 E-value=0.0012 Score=57.59 Aligned_cols=106 Identities=11% Similarity=0.112 Sum_probs=70.0
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhh---ccc--CCCeEEeec-CCCC-CCCc
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCV---AEK--CHGVEHVGG-DMFD-GVPE 247 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~---a~~--~~~v~~~~~-d~~~-~~~~ 247 (354)
..++.+.+. +.+..+|||+||++|.++...+....-..+.++|+ ..-.+. .+. -.-|.++.+ |++. +..+
T Consensus 83 L~ei~~~~~--l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~ 160 (321)
T 3lkz_A 83 LRWLVERRF--LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSEC 160 (321)
T ss_dssp HHHHHHTTS--CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCC
T ss_pred HHHHHHhcC--CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCC
Confidence 455556555 67778999999999999998877665557899998 221110 111 134888887 8776 4455
Q ss_pred ceEEEeccccccCChH-----HHHHHHHHHHHhcCCCC-ceEEE
Q 018565 248 ADAAIIKWVLHDWGDD-----ECIKILKNCKEAITKDK-GKVII 285 (354)
Q Consensus 248 ~D~i~~~~~lh~~~~~-----~~~~~L~~~~~~L~p~g-G~lli 285 (354)
+|+|+|--. ..-+.+ ...++|.-+.++|++ | |.++|
T Consensus 161 ~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~-~~~~f~~ 202 (321)
T 3lkz_A 161 CDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHR-GPREFCV 202 (321)
T ss_dssp CSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred CCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhcc-CCCcEEE
Confidence 999988443 222221 224577777899998 7 66655
No 301
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=97.23 E-value=0.00033 Score=51.77 Aligned_cols=66 Identities=12% Similarity=0.158 Sum_probs=51.8
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
..+|..-.++.|+..|.. ++.|+.|||+.+|+++..+.+.|+.|...|++..... +....|++|+.
T Consensus 17 ~~~l~~~~r~~Il~~L~~--~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~~-g~~~~y~l~~~ 82 (102)
T 3pqk_A 17 LKTLSHPVRLMLVCTLVE--GEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRN-IKQIFYRLTEA 82 (102)
T ss_dssp HHHHCSHHHHHHHHHHHT--CCBCHHHHHHHHTCCTTHHHHHHHHHHHTTSEEEECS-SSCCEEEECSS
T ss_pred HHHcCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEe-CCEEEEEECcH
Confidence 345555567778888865 7999999999999999999999999999999987652 01234777764
No 302
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=97.17 E-value=0.00024 Score=49.54 Aligned_cols=61 Identities=11% Similarity=0.004 Sum_probs=50.6
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcc-cHHHHHHHHhccCceeeccCCCCCceEecCcccc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPS-LLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSR 101 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~-~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~ 101 (354)
.+-.|++.|... +|.|+.+||+.+|+++. .+++.|..|...|+++..+. |...|++|+.++
T Consensus 12 ~~~~IL~~Lk~~-g~~ta~eiA~~Lgit~~~aVr~hL~~Le~eGlV~~~~~--gRP~w~LT~~g~ 73 (79)
T 1xmk_A 12 IKEKICDYLFNV-SDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQGT--TPPIWHLTDKKR 73 (79)
T ss_dssp HHHHHHHHHHHT-CCEEHHHHHHHHCGGGHHHHHHHHHHHHHTTSEEEECS--SSCEEEECHHHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHcCCCcHHHHHHHHHHHHHCCCEEecCC--CCCCeEeCHhHH
Confidence 355677778765 79999999999999998 99999999999999986652 124799998774
No 303
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=97.11 E-value=0.00028 Score=51.71 Aligned_cols=66 Identities=12% Similarity=0.173 Sum_probs=52.5
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
..+|....++.|+..|.+ ++.|+.|||+.+|+++..+.+.|+.|...|++...... ....|++++.
T Consensus 17 ~~~l~~~~r~~Il~~L~~--~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~~g-~~~~y~l~~~ 82 (98)
T 3jth_A 17 LKAMANERRLQILCMLHN--QELSVGELCAKLQLSQSALSQHLAWLRRDGLVTTRKEA-QTVYYTLKSE 82 (98)
T ss_dssp HHHHCSHHHHHHHHHTTT--SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCT-TCCEEEECCH
T ss_pred HHHcCCHHHHHHHHHHhc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeC-CEEEEEECHH
Confidence 345555677888999986 79999999999999999999999999999999877520 0224777654
No 304
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=97.05 E-value=0.00036 Score=61.49 Aligned_cols=57 Identities=18% Similarity=0.219 Sum_probs=47.9
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
+.|++.|...+++.|+.|||+.+|++..-+.|+|..|+..|++++++ +++|++++..
T Consensus 33 l~IL~~l~~~~~~ltl~eia~~lgl~ksTv~RlL~tL~~~G~v~~~~----~~~Y~LG~~~ 89 (275)
T 3mq0_A 33 VRILDLVAGSPRDLTAAELTRFLDLPKSSAHGLLAVMTELDLLARSA----DGTLRIGPHS 89 (275)
T ss_dssp HHHHHHHHHCSSCEEHHHHHHHHTCC--CHHHHHHHHHHTTSEEECT----TSEEEECTHH
T ss_pred HHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECC----CCcEEehHHH
Confidence 45788887654689999999999999999999999999999999886 3789999753
No 305
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=97.04 E-value=0.00029 Score=53.61 Aligned_cols=67 Identities=10% Similarity=0.140 Sum_probs=53.4
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
+.+|.--.++.|+..|.+ +|.|+.+||+.+|+++..+.+.|+.|...|++...... ....|++++.+
T Consensus 12 ~~al~~~~R~~Il~~L~~--~~~~~~eLa~~l~is~~tvs~hL~~L~~~GlV~~~~~g-r~~~y~l~~~~ 78 (118)
T 3f6o_A 12 FQALADPTRRAVLGRLSR--GPATVSELAKPFDMALPSFMKHIHFLEDSGWIRTHKQG-RVRTCAIEKEP 78 (118)
T ss_dssp HHHHTSHHHHHHHHHHHT--CCEEHHHHHTTCCSCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEECSHH
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEEecC-CEEEEEECHHH
Confidence 445556678888888875 79999999999999999999999999999999876520 02348777654
No 306
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=97.02 E-value=0.0005 Score=52.65 Aligned_cols=67 Identities=9% Similarity=0.024 Sum_probs=51.3
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
+.+|....++.|+..|... ++.|+.+||+.+|+++..+.+.|+.|...|++...... ....|++++.
T Consensus 36 ~~al~~~~rl~IL~~L~~~-~~~s~~eLa~~l~is~stvs~~L~~L~~~Glv~~~~~g-r~~~y~l~~~ 102 (122)
T 1u2w_A 36 LKAIADENRAKITYALCQD-EELCVCDIANILGVTIANASHHLRTLYKQGVVNFRKEG-KLALYSLGDE 102 (122)
T ss_dssp HHHHHSHHHHHHHHHHHHS-SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC-----CCEEEESCH
T ss_pred HHHhCCHHHHHHHHHHHHC-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEEC-CEEEEEECHH
Confidence 4455555678899988743 79999999999999999999999999999999876520 0124777754
No 307
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=97.01 E-value=0.00034 Score=52.69 Aligned_cols=64 Identities=9% Similarity=0.126 Sum_probs=49.4
Q ss_pred HHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 34 VKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 34 l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
+....++.|+..|.. ++.|+.+||+.+|+++..+.+.|+.|...|+++..... ....|++|+.+
T Consensus 18 l~~~~r~~IL~~L~~--~~~~~~ela~~l~is~~tv~~~l~~L~~~gli~~~~~g-r~~~y~l~~~~ 81 (114)
T 2oqg_A 18 LSDETRWEILTELGR--ADQSASSLATRLPVSRQAIAKHLNALQACGLVESVKVG-REIRYRALGAE 81 (114)
T ss_dssp TTCHHHHHHHHHHHH--SCBCHHHHHHHSSSCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEECSHH
T ss_pred hCChHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeEEecC-CEEEEEechHH
Confidence 333456677777754 79999999999999999999999999999999876520 01238888765
No 308
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=96.93 E-value=0.00077 Score=47.12 Aligned_cols=60 Identities=8% Similarity=0.014 Sum_probs=48.6
Q ss_pred HHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 37 AVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 37 a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
.....|++.|.. .+.|+.|||+.+|++...+++.|..|...|++...+.+ +..|+++...
T Consensus 17 ~~~~~IL~lL~~--~g~sa~eLAk~LgiSk~aVr~~L~~Le~eG~I~~~~~~--PP~W~~~~~~ 76 (82)
T 1oyi_A 17 EIVCEAIKTIGI--EGATAAQLTRQLNMEKREVNKALYDLQRSAMVYSSDDI--PPRWFMTTEA 76 (82)
T ss_dssp HHHHHHHHHHSS--STEEHHHHHHHSSSCHHHHHHHHHHHHHHTSSEECSSS--SCEEESCC--
T ss_pred HHHHHHHHHHHH--cCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeCCCC--CCcceeccCc
Confidence 345667778876 34999999999999999999999999999999988632 5678887653
No 309
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=96.91 E-value=0.0013 Score=46.22 Aligned_cols=62 Identities=15% Similarity=0.143 Sum_probs=47.1
Q ss_pred HHcChhhhhhhCCC---CCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccch
Q 018565 38 VELGIAEAVEEKGS---PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRR 102 (354)
Q Consensus 38 ~~lglf~~L~~~~~---~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~ 102 (354)
.+..|++.|... + ++|+.+||+++|++...+.+.|.-|...|++...+.. ++.|.+.+....
T Consensus 11 ~~~~IL~~L~~~-~pg~~~t~~eLA~~Lgvsr~tV~~~L~~Le~~G~I~~~g~~--~~~W~i~~~~~~ 75 (81)
T 1qbj_A 11 QEQRILKFLEEL-GEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGT--PPLWKIAVSTQA 75 (81)
T ss_dssp HHHHHHHHHHHH-CTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEESSS--SCEEEEC-----
T ss_pred HHHHHHHHHHHc-CCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCCC--CCeeEEeCcHHh
Confidence 355577777654 4 7999999999999999999999999999999876521 478888776543
No 310
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=96.90 E-value=0.0005 Score=51.18 Aligned_cols=64 Identities=14% Similarity=0.202 Sum_probs=48.6
Q ss_pred HHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 33 VVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 33 ~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
+|..-.++.|+..|.. ++.|+.+||+.+|+++..+.+.|+.|...|++...... ....|++++.
T Consensus 22 ~l~~~~r~~IL~~L~~--~~~~~~ela~~l~is~stvs~~L~~L~~~Glv~~~~~g-r~~~y~l~~~ 85 (106)
T 1r1u_A 22 ALGDYNRIRIMELLSV--SEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQG-QSMIYSLDDI 85 (106)
T ss_dssp HTCSHHHHHHHHHHHH--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEESSH
T ss_pred HhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeC-CEEEEEEChH
Confidence 3444456677777775 78999999999999999999999999999999876520 0113666643
No 311
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=96.88 E-value=0.00086 Score=46.69 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=47.0
Q ss_pred HcChhhhhhhCCC---CCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCc
Q 018565 39 ELGIAEAVEEKGS---PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTP 98 (354)
Q Consensus 39 ~lglf~~L~~~~~---~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~ 98 (354)
+..|++.|... + ++|+.|||+++|++...+.+.|.-|...|++...+. .++.|..++
T Consensus 16 ~~~IL~~L~~~-~~~~~~t~~eLA~~Lgvs~~tV~~~L~~L~~~G~I~~~g~--~~~~W~i~~ 75 (77)
T 1qgp_A 16 EQRILKFLEEL-GEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAG--TPPLWKIAV 75 (77)
T ss_dssp HHHHHHHHHHH-CSSSCEEHHHHHHHHCCCHHHHHHHHHHHHHHTSEEEECS--SSCEEEECC
T ss_pred HHHHHHHHHHc-CCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCC--CCCceEecC
Confidence 45677777654 4 799999999999999999999999999999988762 246777665
No 312
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=96.85 E-value=0.0006 Score=49.79 Aligned_cols=66 Identities=8% Similarity=0.003 Sum_probs=50.7
Q ss_pred HHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 33 VVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 33 ~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
++....++.|+..|.. +++.|..+||+.+|+++..+.+.|+.|...|++..... +....|++|+.+
T Consensus 20 ~l~~~~~~~il~~l~~-~~~~s~~ela~~l~is~~tvs~~l~~L~~~glv~~~~~-~r~~~y~l~~~~ 85 (99)
T 3cuo_A 20 AMSHPKRLLILCMLSG-SPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRD-AQRILYSIKNEA 85 (99)
T ss_dssp HHCSHHHHHHHHHHTT-CCSEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEEC-SSCEEEEECCHH
T ss_pred HhCChHHHHHHHHHHh-CCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEec-CCEEEEEEChHH
Confidence 3444566778888876 25999999999999999999999999999999987652 012247777653
No 313
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=96.84 E-value=0.00066 Score=48.00 Aligned_cols=49 Identities=14% Similarity=0.184 Sum_probs=42.7
Q ss_pred HHcChhhhhhhCC-CCCCHHHHHhHc-----CCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKG-SPITLNELASAL-----KCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~-~~~t~~elA~~~-----g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
-+..|++.|...+ ++.|++||++.+ +++..-+.|.|+.|...|++.+..
T Consensus 18 ~r~~IL~~l~~~~~~~~s~~el~~~l~~~~~~is~~TVyR~L~~L~~~Glv~~~~ 72 (83)
T 2fu4_A 18 PRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHN 72 (83)
T ss_dssp HHHHHHHHHTSGGGSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCeEEEe
Confidence 4566888887643 589999999999 999999999999999999998775
No 314
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=96.84 E-value=0.00032 Score=52.49 Aligned_cols=64 Identities=8% Similarity=0.039 Sum_probs=48.4
Q ss_pred HHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 33 VVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 33 ~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
+|..-.++.|+..|.. ++.|+.|||+.+|+++..+.+.|+.|...|++...... ....|++++.
T Consensus 21 al~~~~r~~IL~~L~~--~~~s~~eLa~~lgis~stvs~~L~~L~~~GlV~~~~~g-r~~~y~l~~~ 84 (108)
T 2kko_A 21 ALANGRRLQILDLLAQ--GERAVEAIATATGMNLTTASANLQALKSGGLVEARREG-TRQYYRIAGE 84 (108)
T ss_dssp HHTTSTTHHHHHHHTT--CCEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEEEET-TEEEEEESCH
T ss_pred HhCCHHHHHHHHHHHc--CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeC-CEEEEEEChH
Confidence 3334455667777765 79999999999999999999999999999999876520 0124666654
No 315
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=96.84 E-value=0.00055 Score=52.07 Aligned_cols=66 Identities=11% Similarity=-0.010 Sum_probs=49.9
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
+.+|..-.++.|+..|.. ++.++.+||+.+|+++..+.+.|+.|...|++...... ....|++|+.
T Consensus 15 ~~aL~~~~r~~IL~~L~~--~~~~~~eLa~~lgis~stvs~~L~~L~~~GlV~~~~~g-r~~~y~l~~~ 80 (118)
T 2jsc_A 15 GRALADPTRCRILVALLD--GVCYPGQLAAHLGLTRSNVSNHLSCLRGCGLVVATYEG-RQVRYALADS 80 (118)
T ss_dssp HHHHSSHHHHHHHHHHHT--TCCSTTTHHHHHSSCHHHHHHHHHHHTTTTSEEEEECS-SSEEEEESSH
T ss_pred HHHhCCHHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEEEEEC-CEEEEEEChH
Confidence 334444556677777765 68999999999999999999999999999999876520 0124777753
No 316
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=96.83 E-value=0.00058 Score=51.31 Aligned_cols=76 Identities=11% Similarity=0.164 Sum_probs=57.5
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCC--HHHHHhHc-CCCcccHHHHHHHHhccCceeeccCCCCCce
Q 018565 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPIT--LNELASAL-KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMA 93 (354)
Q Consensus 17 ~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t--~~elA~~~-g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~ 93 (354)
+...+++.+.+.|...+|. .|.. ++.+ +.||++.+ |+++..+.+.|+.|...|+|++... ....
T Consensus 16 ~~~~~l~~l~~~wrl~IL~---------~L~~--g~~~~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV~r~~~--r~~~ 82 (111)
T 3df8_A 16 PSESVLHLLGKKYTMLIIS---------VLGN--GSTRQNFNDIRSSIPGISSTILSRRIKDLIDSGLVERRSG--QITT 82 (111)
T ss_dssp TTSSTHHHHHSTTHHHHHH---------HHTS--SSSCBCHHHHHHTSTTCCHHHHHHHHHHHHHTTSEEEEES--SSEE
T ss_pred HHHHHHHHHcCccHHHHHH---------HHhc--CCCCCCHHHHHHHccCCCHHHHHHHHHHHHHCCCEEEeec--CcEE
Confidence 3445566666677665554 3443 6877 99999999 9999999999999999999998741 1257
Q ss_pred EecCcccchhhc
Q 018565 94 FQQTPLSRRLMR 105 (354)
Q Consensus 94 y~~t~~~~~l~~ 105 (354)
|++|+.|+.+..
T Consensus 83 y~LT~~G~~l~~ 94 (111)
T 3df8_A 83 YALTEKGMNVRN 94 (111)
T ss_dssp EEECHHHHHHHH
T ss_pred EEECccHHHHHH
Confidence 999998875543
No 317
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.83 E-value=0.032 Score=55.67 Aligned_cols=147 Identities=14% Similarity=0.144 Sum_probs=102.9
Q ss_pred CCceEEEecCCccHHHHHHHHHCC--------CCeEEEeechHHhhhccc------------------------------
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFP--------RIRGINFDLPHVVCVAEK------------------------------ 230 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p--------~~~~~~~D~~~~~~~a~~------------------------------ 230 (354)
+...||-+|||.=.....+...+| ++++.-+|.|++++.-++
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 568999999999999999987755 678888888888764221
Q ss_pred CCCeEEeecCCCCC--C-----------Cc-ceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCC
Q 018565 231 CHGVEHVGGDMFDG--V-----------PE-ADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGV 296 (354)
Q Consensus 231 ~~~v~~~~~d~~~~--~-----------~~-~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~ 296 (354)
.++.+++..|+.+. + ++ .-++++-.+|.+++.+.+.++|+.+.+ + | ++.+++.|.+.+....
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~-~~~~~~~e~~~~~~~~- 262 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-E-NSHFIILEQLIPKGPF- 262 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-S-SEEEEEEEECCTTCTT-
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-C-CceEEEEEeecCCCCC-
Confidence 14889999999872 1 11 346788899999999999999999985 4 6 7888888988765333
Q ss_pred CcchhhhhhhccHHhhc--cc--CCcccCCHHHHHHHHHHcCCceeEEEEc
Q 018565 297 DNKFKSVRLMLDMVMMA--HT--NKGKERSLKEWDYVLRQAGFSRYNITSI 343 (354)
Q Consensus 297 ~~~~~~~~~~~~l~~~~--~~--~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 343 (354)
+. + ...+--+... .. .-....+.++..+.|.+.||+.+....+
T Consensus 263 d~-f---~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 263 EP-F---SKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp SH-H---HHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred Ch-H---HHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 21 2 1111111111 00 0113347899999999999998776654
No 318
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=96.81 E-value=0.00057 Score=54.42 Aligned_cols=68 Identities=13% Similarity=0.184 Sum_probs=56.0
Q ss_pred HHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 30 NMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 30 ~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
.+.+|.--.++.|+..|.. ++.|+.+||+.+|+++..+.+.|+.|...|+|+..... ....|++|+.+
T Consensus 51 ~l~aL~~p~R~~IL~~L~~--~~~t~~eLa~~lgls~stvs~hL~~L~~aGlV~~~~~G-r~~~y~lt~~~ 118 (151)
T 3f6v_A 51 QLEVAAEPTRRRLVQLLTS--GEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRKDG-RFRYYRLDPQG 118 (151)
T ss_dssp HHHHHTSHHHHHHHHHGGG--CCEEHHHHHTTSSSCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEECHHH
T ss_pred HHHHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecC-CEEEEEEChHH
Confidence 4667777789999999985 79999999999999999999999999999999876520 01248888754
No 319
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=96.80 E-value=0.0014 Score=48.79 Aligned_cols=75 Identities=12% Similarity=0.124 Sum_probs=53.5
Q ss_pred HHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHc-CCCcccHHHHHHHHhccCceeeccCCCC--CceEe
Q 018565 19 VEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASAL-KCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQ 95 (354)
Q Consensus 19 ~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~-g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~ 95 (354)
..+++.+.+.|...+| ..|.. ++.+..|||+.+ |+++..+.+.|+.|...|++++....++ .-.|.
T Consensus 5 ~~~l~~l~~~~~~~IL---------~~L~~--~~~~~~eLa~~l~~is~~tls~~L~~Le~~GlI~r~~~~~d~r~~~y~ 73 (107)
T 2hzt_A 5 EATLEVIGGKWKXVIL---------XHLTH--GKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEYE 73 (107)
T ss_dssp HHHHHHHCSTTHHHHH---------HHHTT--CCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEE
T ss_pred HHHHHHHcCccHHHHH---------HHHHh--CCCCHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEE
Confidence 3444455555544444 44443 799999999999 9999999999999999999987752111 12499
Q ss_pred cCcccchhh
Q 018565 96 QTPLSRRLM 104 (354)
Q Consensus 96 ~t~~~~~l~ 104 (354)
+|+.++.+.
T Consensus 74 LT~~G~~l~ 82 (107)
T 2hzt_A 74 LSEYGRSLE 82 (107)
T ss_dssp ECTTGGGGH
T ss_pred ECccHHHHH
Confidence 998876444
No 320
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=96.78 E-value=0.0025 Score=49.73 Aligned_cols=67 Identities=15% Similarity=0.224 Sum_probs=47.4
Q ss_pred HHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 37 AVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 37 a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
..++.|+..|... ++.|..+||+.+++++..+.++++.|...|++++.....+ .-.+.+|+.|+.+.
T Consensus 37 ~~~~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 105 (142)
T 3ech_A 37 PPDVHVLKLIDEQ-RGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIH 105 (142)
T ss_dssp HHHHHHHHHHHHT-TTCCHHHHHHHHC---CHHHHHHHHHHHTTSEEC----------CCEECHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCcCHHHHHHHhCCCHHHHHHHHHHHHHCCCEeeccCCCCCCeeeeEECHHHHHHH
Confidence 5677788888875 6999999999999999999999999999999998652100 11367887776443
No 321
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=96.76 E-value=0.00055 Score=59.80 Aligned_cols=58 Identities=17% Similarity=0.226 Sum_probs=49.6
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
+.|++.|....++.|+.|||+.+|+++.-+.|+|+.|+..|+++++.. .++|++++..
T Consensus 9 l~IL~~l~~~~~~lsl~eia~~lgl~ksT~~RlL~tL~~~G~v~~~~~---~~~Y~lG~~~ 66 (260)
T 3r4k_A 9 LTLLTYFNHGRLEIGLSDLTRLSGMNKATVYRLMSELQEAGFVEQVEG---ARSYRLGPQV 66 (260)
T ss_dssp HHHHTTCBTTBSEEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEECSS---SSEEEECTTH
T ss_pred HHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEcCC---CCcEEcCHHH
Confidence 457788875336899999999999999999999999999999998863 3799998753
No 322
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=96.75 E-value=0.0012 Score=48.08 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=47.4
Q ss_pred hhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhh
Q 018565 42 IAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLM 104 (354)
Q Consensus 42 lf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~ 104 (354)
|+..+.. + ++..+||..+|++++.++..++.|...|+++... +.|.+|+.|+.+.
T Consensus 13 IL~~i~~--~-~~~t~La~~~~ls~~~~~~~l~~L~~~GLI~~~~-----~~~~LT~kG~~~l 67 (95)
T 1r7j_A 13 ILEACKS--G-SPKTRIMYGANLSYALTGRYIKMLMDLEIIRQEG-----KQYMLTKKGEELL 67 (95)
T ss_dssp HHHHHTT--C-BCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-----TEEEECHHHHHHH
T ss_pred HHHHHHc--C-CCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEEC-----CeeEEChhHHHHH
Confidence 4455543 5 9999999999999999999999999999999987 6799999997444
No 323
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=96.71 E-value=0.00094 Score=57.62 Aligned_cols=59 Identities=19% Similarity=0.197 Sum_probs=49.2
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccc
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSR 101 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~ 101 (354)
+.|++.|...+++.|+.|||+.+|+++..+.|+|+.|...|++++... +++|++++...
T Consensus 9 l~iL~~l~~~~~~~s~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~~---~~~Y~lg~~~~ 67 (241)
T 2xrn_A 9 ASIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGP---AGGFRLGPALG 67 (241)
T ss_dssp HHHHHHHHTCTTCEEHHHHHHHTTSCHHHHHHHHHHHHTTTSEEECGG---GCEEEECSHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC---CCeEEECHHHH
Confidence 456777765435799999999999999999999999999999998753 37899997643
No 324
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.71 E-value=0.0026 Score=56.01 Aligned_cols=92 Identities=16% Similarity=0.049 Sum_probs=64.8
Q ss_pred CCceEEEecCCccHHHHHHHHHC-----CCCeEEEeec-hH--------------------------Hhhhccc------
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAF-----PRIRGINFDL-PH--------------------------VVCVAEK------ 230 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~-----p~~~~~~~D~-~~--------------------------~~~~a~~------ 230 (354)
.+.+|||+|+..|..+..+++.. ++.+++++|. .. ..+.+++
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 46899999999999988887653 4778988884 11 1112222
Q ss_pred --CCCeEEeecCCCC--C-CC--cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEE
Q 018565 231 --CHGVEHVGGDMFD--G-VP--EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 231 --~~~v~~~~~d~~~--~-~~--~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
.++|+++.||+.+ + .+ ++|+|++-.-.+ +.....|..+.+.|+| ||.|++
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~p-GGiIv~ 242 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSV-GGYVIV 242 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEE-EEEEEE
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCC-CEEEEE
Confidence 2789999999976 2 32 489988865321 2356789999999999 775544
No 325
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=96.70 E-value=0.00097 Score=46.31 Aligned_cols=45 Identities=20% Similarity=0.326 Sum_probs=39.0
Q ss_pred hhhhhhhC-----CCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 42 IAEAVEEK-----GSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 42 lf~~L~~~-----~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
|++.|... |+|.|+.|||+.+|+++..+++-|..|...|++....
T Consensus 9 IL~~I~~~i~~~~g~~psv~EIa~~lgvS~~TVrr~L~~Le~kG~I~R~~ 58 (77)
T 2jt1_A 9 IISIVQERQNMDDGAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVN 58 (77)
T ss_dssp HHHHHHHHHHHHTTSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEES
T ss_pred HHHHHHHHHhhccCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEecC
Confidence 45555443 5799999999999999999999999999999999885
No 326
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=96.64 E-value=0.0014 Score=56.78 Aligned_cols=57 Identities=12% Similarity=0.107 Sum_probs=48.4
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
+.|++.|...+++.|+.|||+.+|+++..+.|+|+.|...|+++... ++.|++++..
T Consensus 11 l~iL~~l~~~~~~~~~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~----~~~Y~lg~~~ 67 (249)
T 1mkm_A 11 FEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKK----DKRYVPGYKL 67 (249)
T ss_dssp HHHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECT----TSCEEECTHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEECC----CCcEEECHHH
Confidence 45677776543589999999999999999999999999999999883 3889998753
No 327
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=96.59 E-value=0.0023 Score=49.48 Aligned_cols=78 Identities=13% Similarity=0.003 Sum_probs=59.8
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHc-CCCcccHHHHHHHHhccCceeeccCCCC--Cce
Q 018565 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASAL-KCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMA 93 (354)
Q Consensus 17 ~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~-g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~ 93 (354)
+....++++.+-|...+|... .. ++.+..||++.+ |+++..+.+.|+.|...|+|++.....+ .-.
T Consensus 15 pi~~~l~~lg~kW~l~IL~~L---------~~--g~~rf~eL~~~l~gIs~~~Ls~~L~~Le~~GLV~R~~~~~d~r~v~ 83 (131)
T 4a5n_A 15 PVEFTLDVIGGKWKGILFYHM---------ID--GKKRFNEFRRICPSITQRMLTLQLRELEADGIVHREVYHQVPPKVE 83 (131)
T ss_dssp HHHHHHHHHCSSSHHHHHHHH---------TT--SCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEE
T ss_pred cHHHHHHHHcCcCHHHHHHHH---------hc--CCcCHHHHHHHhcccCHHHHHHHHHHHHHCCCEEEEecCCCCCeEE
Confidence 355667777777776666543 23 799999999999 9999999999999999999988742111 125
Q ss_pred EecCcccchhhc
Q 018565 94 FQQTPLSRRLMR 105 (354)
Q Consensus 94 y~~t~~~~~l~~ 105 (354)
|++|+.|+.+..
T Consensus 84 y~LT~~G~~l~~ 95 (131)
T 4a5n_A 84 YSLTEFGRTLEP 95 (131)
T ss_dssp EEECTTGGGGHH
T ss_pred EEECHhHHHHHH
Confidence 999999986664
No 328
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=96.58 E-value=0.0013 Score=57.29 Aligned_cols=60 Identities=20% Similarity=0.203 Sum_probs=50.3
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhh
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLM 104 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~ 104 (354)
+.|++.|...+++.|+.|||+.+|+++.-+.|+|+.|...|+++.++ ++|++++....+.
T Consensus 17 l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~~L~~~G~v~~~~-----~~Y~Lg~~~~~l~ 76 (257)
T 2g7u_A 17 FAVLLAFDAQRPNPTLAELATEAGLSRPAVRRILLTLQKLGYVAGSG-----GRWSLTPRVLSIG 76 (257)
T ss_dssp HHHHHTCSSSCSSCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-----TEEEECGGGHHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeCC-----CEEEEcHHHHHHH
Confidence 45677776434689999999999999999999999999999999875 8999998754343
No 329
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.58 E-value=0.0045 Score=55.39 Aligned_cols=78 Identities=15% Similarity=0.201 Sum_probs=62.2
Q ss_pred hHHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHC-CCCeEEEeec-hHHhhhccc--CCCeEEeecCCCC-C-----
Q 018565 175 AMRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAF-PRIRGINFDL-PHVVCVAEK--CHGVEHVGGDMFD-G----- 244 (354)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~--~~~v~~~~~d~~~-~----- 244 (354)
+.+++++.+. ..++..+||..+|.|..+..++++. |+.+++++|. +.+++.++. .+|++++.++|.+ .
T Consensus 45 Ll~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~ 122 (347)
T 3tka_A 45 LLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAE 122 (347)
T ss_dssp TTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHH
T ss_pred cHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHh
Confidence 3567777777 6788999999999999999999884 7889999999 888887754 5789999998876 2
Q ss_pred --CC-cceEEEec
Q 018565 245 --VP-EADAAIIK 254 (354)
Q Consensus 245 --~~-~~D~i~~~ 254 (354)
++ ++|.|++.
T Consensus 123 ~g~~~~vDgILfD 135 (347)
T 3tka_A 123 RDLIGKIDGILLD 135 (347)
T ss_dssp TTCTTCEEEEEEE
T ss_pred cCCCCcccEEEEC
Confidence 12 36777664
No 330
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=96.53 E-value=0.0027 Score=44.58 Aligned_cols=45 Identities=16% Similarity=0.081 Sum_probs=39.3
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeec
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEV 85 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~ 85 (354)
..|++.|... ++.|..|||+.+|+++..+++.|+.|...|++...
T Consensus 3 ~~Il~~L~~~-~~~s~~eLa~~lgvs~~tv~r~L~~L~~~GlI~~~ 47 (81)
T 2htj_A 3 NEILEFLNRH-NGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRS 47 (81)
T ss_dssp HHHHHHHHHS-CCCCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEe
Confidence 3466777654 68999999999999999999999999999999854
No 331
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=96.52 E-value=0.0018 Score=49.45 Aligned_cols=64 Identities=17% Similarity=0.213 Sum_probs=49.4
Q ss_pred HHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 33 VVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 33 ~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
+|....++.|+..|.+ ++.++.+||+.+|+++..+.+.|+.|...|++...... ....|++++.
T Consensus 42 aL~~~~rl~IL~~L~~--~~~s~~ela~~lgis~stvs~~L~~Le~~Glv~~~~~g-r~~~y~l~~~ 105 (122)
T 1r1t_A 42 VLADPNRLRLLSLLAR--SELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQG-RHVYYQLQDH 105 (122)
T ss_dssp HHCCHHHHHHHHHHTT--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEESSH
T ss_pred HhCCHHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEeC-CEEEEEEChH
Confidence 3444467788888875 79999999999999999999999999999999876520 0123666643
No 332
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=96.47 E-value=0.0016 Score=56.83 Aligned_cols=57 Identities=12% Similarity=0.179 Sum_probs=47.9
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
+.|++.|....++.|+.|||+.+|+++.-+.|+|+.|...|+++.+. +++|++++..
T Consensus 26 l~iL~~l~~~~~~~~~~eia~~~gl~kstv~r~l~tL~~~G~v~~~~----~~~Y~lg~~~ 82 (260)
T 2o0y_A 26 IDLLELFDAAHPTRSLKELVEGTKLPKTTVVRLVATMCARSVLTSRA----DGSYSLGPEM 82 (260)
T ss_dssp HHHHTTCBTTBSSBCHHHHHHHHCCCHHHHHHHHHHHHHTTSEEECT----TSCEEECHHH
T ss_pred HHHHHHHhhCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECC----CCeEEecHHH
Confidence 45677775423689999999999999999999999999999999886 2589998753
No 333
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.45 E-value=0.0085 Score=54.63 Aligned_cols=104 Identities=15% Similarity=0.096 Sum_probs=72.6
Q ss_pred cCCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc------------CCCeEEeecCCCC-C--CC-cce
Q 018565 187 FDGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK------------CHGVEHVGGDMFD-G--VP-EAD 249 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------~~~v~~~~~d~~~-~--~~-~~D 249 (354)
..++.+|||+-+|.|.-+..+++..++-.++..|+ +.-+...++ ..++.+...|... + .+ .||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 56788999999999999999998777667889998 544443321 3578888888776 2 23 499
Q ss_pred EEEeccc--------c-------ccCChHHH-------HHHHHHHHHhcCCCCceEEEEeeeeC
Q 018565 250 AAIIKWV--------L-------HDWGDDEC-------IKILKNCKEAITKDKGKVIIVEAIIE 291 (354)
Q Consensus 250 ~i~~~~~--------l-------h~~~~~~~-------~~~L~~~~~~L~p~gG~lli~e~~~~ 291 (354)
.|++--. + ..+..++. .++|+++.+.||| ||+|+-+.-.+.
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkp-GG~LVYsTCSl~ 288 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKP-GGHVVYSTCSLS 288 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEE-EEEEEEEESCCC
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEEEEeCCCc
Confidence 9987211 1 11222221 4789999999999 998887654433
No 334
>2ia2_A Putative transcriptional regulator; SAD, PSI-2, structural genomics, structure initiative, midwest center for structural genomic transcription; 2.10A {Rhodococcus SP}
Probab=96.40 E-value=0.0017 Score=56.79 Aligned_cols=56 Identities=21% Similarity=0.297 Sum_probs=48.3
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
+.|++.|....++.|+.|||+.+|+++.-+.|+|+.|...|+++.++ ++|++++..
T Consensus 24 l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~tL~~~G~v~~~~-----~~Y~Lg~~~ 79 (265)
T 2ia2_A 24 LAVIRCFDHRNQRRTLSDVARATDLTRATARRFLLTLVELGYVATDG-----SAFWLTPRV 79 (265)
T ss_dssp HHHHHTCCSSCSSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEESS-----SEEEECGGG
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecC-----CEEEEcHHH
Confidence 45677776433689999999999999999999999999999999874 899998754
No 335
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=96.38 E-value=0.0029 Score=43.98 Aligned_cols=43 Identities=5% Similarity=0.197 Sum_probs=39.5
Q ss_pred hhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeec
Q 018565 42 IAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEV 85 (354)
Q Consensus 42 lf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~ 85 (354)
|.+.|... +.+++.|||+.+++++.-++|-|+.|...|++.+.
T Consensus 7 Il~~L~~~-g~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~l~R~ 49 (78)
T 1xn7_A 7 VRDLLALR-GRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRI 49 (78)
T ss_dssp HHHHHHHS-CSBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHc-CCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEe
Confidence 56777764 79999999999999999999999999999999988
No 336
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=96.36 E-value=0.0015 Score=47.72 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=53.0
Q ss_pred HHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-C-CCceEecCcccc
Q 018565 32 AVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-Q-GSMAFQQTPLSR 101 (354)
Q Consensus 32 ~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~-~~~~y~~t~~~~ 101 (354)
.++....++.|+..|... ++.|..+||+.+|+++..+.+.|+.|...|+++..... + ....|++|+.+.
T Consensus 11 ~~l~~~~~~~iL~~L~~~-~~~~~~ela~~l~is~~tvs~~l~~L~~~gli~~~~~~~~~r~~~~~lt~~g~ 81 (100)
T 1ub9_A 11 HILGNPVRLGIMIFLLPR-RKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGM 81 (100)
T ss_dssp HHHHSHHHHHHHHHHHHH-SEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHH
T ss_pred cccCChHHHHHHHHHHhc-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCCcceEEEEECHHHH
Confidence 455566777888888643 69999999999999999999999999999999854310 0 023588887764
No 337
>1yyv_A Putative transcriptional regulator; reductive methylation, D lysine, structural genomics, PSI; HET: MLY; 2.35A {Salmonella typhimurium} SCOP: a.4.5.69
Probab=96.36 E-value=0.0021 Score=49.78 Aligned_cols=76 Identities=16% Similarity=0.230 Sum_probs=54.7
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHc-CCCcccHHHHHHHHhccCceeeccCCCC--CceE
Q 018565 18 KVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASAL-KCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAF 94 (354)
Q Consensus 18 ~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~-g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y 94 (354)
...+++++.+.|...+ +..|.. ++.+..||++.+ |+++..+.+.|+.|...|+|++....++ .-.|
T Consensus 25 ~~~~l~~l~~~w~l~I---------L~~L~~--g~~~~~eLa~~l~gis~~tls~~L~~Le~~GlV~r~~~~~d~r~~~y 93 (131)
T 1yyv_A 25 SREVLKHVTSRWGVLI---------LVALRD--GTHRFSDLRRXMGGVSEXMLAQSLQALEQDGFLNRVSYPVVPPHVEY 93 (131)
T ss_dssp HHHHHHHHHSHHHHHH---------HHHGGG--CCEEHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEECSSSCEEEE
T ss_pred HHHHHHHHcCCcHHHH---------HHHHHc--CCCCHHHHHHHhccCCHHHHHHHHHHHHHCCcEEEEecCCCCCeEEE
Confidence 4445555555555444 344443 799999999999 7999999999999999999987642110 1259
Q ss_pred ecCcccchhh
Q 018565 95 QQTPLSRRLM 104 (354)
Q Consensus 95 ~~t~~~~~l~ 104 (354)
++|+.++.+.
T Consensus 94 ~LT~~G~~l~ 103 (131)
T 1yyv_A 94 SLTPLGEQVS 103 (131)
T ss_dssp EECHHHHHHH
T ss_pred EECccHHHHH
Confidence 9999886544
No 338
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=96.34 E-value=0.0025 Score=49.85 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=44.9
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhh
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLM 104 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~ 104 (354)
++.|+.+||+.+|+++..+.+.|+.|...|++.... .+.|.+|+.++.+.
T Consensus 21 ~~~~~~ela~~l~vs~~tvs~~l~~Le~~Glv~r~~----~~~~~LT~~g~~~~ 70 (142)
T 1on2_A 21 GYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEK----YRGLVLTSKGKKIG 70 (142)
T ss_dssp SSCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEET----TTEEEECHHHHHHH
T ss_pred CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEee----CceEEEchhHHHHH
Confidence 689999999999999999999999999999999876 37899999886443
No 339
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=96.33 E-value=0.0025 Score=47.87 Aligned_cols=76 Identities=13% Similarity=0.089 Sum_probs=54.1
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHc-CCCcccHHHHHHHHhccCceeeccCCCC--CceE
Q 018565 18 KVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASAL-KCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAF 94 (354)
Q Consensus 18 ~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~-g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y 94 (354)
...+++++.+.|...+| ..|.. ++.+..+||+.+ |+++..+.+.|+.|...|+++......+ .-.|
T Consensus 12 ~~~~l~~l~~~~~~~IL---------~~L~~--~~~~~~eLa~~l~~is~~tvs~~L~~Le~~GlI~r~~~~~d~r~~~~ 80 (112)
T 1z7u_A 12 INLALSTINGKWKLSLM---------DELFQ--GTKRNGELMRALDGITQRVLTDRLREMEKDGLVHRESFNELPPRVEY 80 (112)
T ss_dssp HHHHHHTTCSTTHHHHH---------HHHHH--SCBCHHHHHHHSTTCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEEE
T ss_pred HHHHHHHHcCccHHHHH---------HHHHh--CCCCHHHHHHHhccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEE
Confidence 34455555555554444 44444 689999999999 9999999999999999999987752111 1138
Q ss_pred ecCcccchhh
Q 018565 95 QQTPLSRRLM 104 (354)
Q Consensus 95 ~~t~~~~~l~ 104 (354)
.+|+.|+.+.
T Consensus 81 ~LT~~G~~~~ 90 (112)
T 1z7u_A 81 TLTPEGYALY 90 (112)
T ss_dssp EECHHHHHHH
T ss_pred EECHhHHHHH
Confidence 9998876443
No 340
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=96.32 E-value=0.0022 Score=55.33 Aligned_cols=63 Identities=14% Similarity=0.148 Sum_probs=52.1
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..|||+.+|+++..+.|.|+.|...|++++.+. ...|++|+.++.+.
T Consensus 153 ~~~~IL~~L~~~-~~~s~~eLA~~lglsksTv~r~L~~Le~~GlV~r~~r---~~~~~LT~~G~~l~ 215 (244)
T 2wte_A 153 EEMKLLNVLYET-KGTGITELAKMLDKSEKTLINKIAELKKFGILTQKGK---DRKVELNELGLNVI 215 (244)
T ss_dssp HHHHHHHHHHHH-TCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETT---TTEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC---ccEEEECHHHHHHH
Confidence 345566666543 6899999999999999999999999999999998753 37899999886543
No 341
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=96.26 E-value=0.0027 Score=45.03 Aligned_cols=44 Identities=7% Similarity=0.213 Sum_probs=39.8
Q ss_pred hhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 42 IAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 42 lf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
|.+.|... +.+++.|||+.+++++.-++|-|+.|...|++.+..
T Consensus 7 Il~~L~~~-g~vsv~eLA~~l~VS~~TIRrDL~~Le~~G~l~R~~ 50 (87)
T 2k02_A 7 VRDMLALQ-GRMEAKQLSARLQTPQPLIDAMLERMEAMGKVVRIS 50 (87)
T ss_dssp HHHHHHHS-CSEEHHHHHHHTTCCHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHc-CCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 56777764 799999999999999999999999999999998874
No 342
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=96.22 E-value=0.0034 Score=48.59 Aligned_cols=66 Identities=11% Similarity=0.244 Sum_probs=50.7
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..+||+.+++++..+.+.|+.|...|++...... |+ .-.|.+|+.++.+.
T Consensus 34 ~~~~iL~~l~~~-~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~r~~~~~lT~~G~~~~ 101 (139)
T 3bja_A 34 VQFGVIQVLAKS-GKVSMSKLIENMGCVPSNMTTMIQRMKRDGYVMTEKNPNDQRETLVYLTKKGEETK 101 (139)
T ss_dssp HHHHHHHHHHHS-CSEEHHHHHHHCSSCCTTHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHHCCChhHHHHHHHHHHHCCCeeeccCCCCCceeEEEECHHHHHHH
Confidence 456677777664 68999999999999999999999999999999876421 10 12377888776443
No 343
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=96.22 E-value=0.0026 Score=46.47 Aligned_cols=64 Identities=17% Similarity=0.204 Sum_probs=49.1
Q ss_pred HcChhhhhhhCCCCCCHHHH----HhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhh
Q 018565 39 ELGIAEAVEEKGSPITLNEL----ASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLM 104 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~el----A~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~ 104 (354)
++.++..|... ++.|..+| |+.+++++..+.++|+.|...|++++.... ....|.+|+.|+.+.
T Consensus 10 q~~iL~~l~~~-~~~~~~el~~~la~~l~is~~tvs~~l~~Le~~gli~r~~~~-r~~~~~LT~~G~~~~ 77 (99)
T 1tbx_A 10 EAIVLAYLYDN-EGIATYDLYKKVNAEFPMSTATFYDAKKFLIQEGFVKERQER-GEKRLYLTEKGKLFA 77 (99)
T ss_dssp HHHHHHHHTTC-TTCBHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCEEEEecC-CceEEEECHHHHHHH
Confidence 34556666553 68999999 999999999999999999999999876410 024588888876444
No 344
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=96.22 E-value=0.0066 Score=47.12 Aligned_cols=66 Identities=14% Similarity=0.221 Sum_probs=52.1
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..+||+.+++++..+.+.|+-|...|+++..... |+ ...|.+|+.++.+.
T Consensus 32 ~~~~iL~~l~~~-~~~~~~ela~~l~is~~~vs~~l~~L~~~gli~~~~~~~d~r~~~~~lT~~G~~~~ 99 (142)
T 3bdd_A 32 TRYSILQTLLKD-APLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREAL 99 (142)
T ss_dssp HHHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 456677788654 68999999999999999999999999999999877421 11 22488898887554
No 345
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.19 E-value=0.011 Score=51.57 Aligned_cols=91 Identities=16% Similarity=0.143 Sum_probs=61.2
Q ss_pred cCCCceEEEecC------CccHHHHHHHHHCCC-CeEEEeechHHhhhcccCCCeEEeecCCCC-C-CCcceEEEeccc-
Q 018565 187 FDGIETLVDIGG------NDGTTLRTLTKAFPR-IRGINFDLPHVVCVAEKCHGVEHVGGDMFD-G-VPEADAAIIKWV- 256 (354)
Q Consensus 187 ~~~~~~vLDvG~------G~G~~~~~l~~~~p~-~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~-~~~~D~i~~~~~- 256 (354)
.+.+.+|||+|+ -.|.. .+.+..|. ..++.+|+.++...+ . .++.||+.+ . ..++|+|+.-..
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sda----~-~~IqGD~~~~~~~~k~DLVISDMAP 179 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSDA----D-STLIGDCATVHTANKWDLIISDMYD 179 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCSS----S-EEEESCGGGEEESSCEEEEEECCCC
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccCC----C-eEEEccccccccCCCCCEEEecCCC
Confidence 467899999996 56663 34455776 689999985544322 2 348899776 2 345999987322
Q ss_pred --cccCC------hHHHHHHHHHHHHhcCCCCceEEE
Q 018565 257 --LHDWG------DDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 257 --lh~~~------~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
--+.+ ..-+..++.=+.+.|+| ||.+++
T Consensus 180 NtTG~~D~d~~Rs~~L~ElALdfA~~~Lkp-GGsFvV 215 (344)
T 3r24_A 180 PRTKHVTKENDSKEGFFTYLCGFIKQKLAL-GGSIAV 215 (344)
T ss_dssp TTSCSSCSCCCCCCTHHHHHHHHHHHHEEE-EEEEEE
T ss_pred CcCCccccchhHHHHHHHHHHHHHHHhCcC-CCEEEE
Confidence 11111 22467778888899999 998887
No 346
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=96.18 E-value=0.0028 Score=47.12 Aligned_cols=77 Identities=16% Similarity=0.246 Sum_probs=56.3
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHc-CCCcccHHHHHHHHhccCceeeccCCCC--Cce
Q 018565 17 AKVEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASAL-KCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMA 93 (354)
Q Consensus 17 ~~~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~-g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~ 93 (354)
....+++.+.+.|...+|. .|.. ++.+..||++.+ |+++..+.+.|+.|...|++++.....+ .-.
T Consensus 14 ~~~~~l~~l~~~~~~~IL~---------~L~~--~~~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV~r~~~~~d~r~~~ 82 (107)
T 2fsw_A 14 PVRKSMQIFAGKWTLLIIF---------QINR--RIIRYGELKRAIPGISEKMLIDELKFLCGKGLIKKKQYPEVPPRVE 82 (107)
T ss_dssp HHHHHHHHHTSSSHHHHHH---------HHTT--SCEEHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEE
T ss_pred CHHHHHHHHcCccHHHHHH---------HHHh--CCcCHHHHHHHcccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeeE
Confidence 4456666666666655544 3433 799999999999 5999999999999999999987652111 124
Q ss_pred EecCcccchhh
Q 018565 94 FQQTPLSRRLM 104 (354)
Q Consensus 94 y~~t~~~~~l~ 104 (354)
|.+|+.|+.+.
T Consensus 83 y~LT~~G~~l~ 93 (107)
T 2fsw_A 83 YSLTPLGEKVL 93 (107)
T ss_dssp EEECHHHHTTH
T ss_pred EEECccHHHHH
Confidence 99999886444
No 347
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=96.17 E-value=0.03 Score=44.60 Aligned_cols=66 Identities=14% Similarity=0.201 Sum_probs=51.6
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.++++-|...|++++....++ .-.+.+|+.|+.+.
T Consensus 47 ~q~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~ 114 (162)
T 3k0l_A 47 PQFTALSVLAAK-PNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKL 114 (162)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCeEecCCCCcCCeeEeEECHhHHHHH
Confidence 445678888765 6999999999999999999999999999999987752111 11378888876444
No 348
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.15 E-value=0.026 Score=54.38 Aligned_cols=109 Identities=9% Similarity=0.031 Sum_probs=69.6
Q ss_pred HHHHHhcCCCccCCCceEEEecCCccHHHHHHHHHC-------------CCCeEEEeec-hHHhhhccc------CCCeE
Q 018565 176 MRAIIEGCPEVFDGIETLVDIGGNDGTTLRTLTKAF-------------PRIRGINFDL-PHVVCVAEK------CHGVE 235 (354)
Q Consensus 176 ~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-------------p~~~~~~~D~-~~~~~~a~~------~~~v~ 235 (354)
++.+++.+. ...+.+|+|-.||+|.++....+.. ....+.|+|+ +.+...++. .+.-.
T Consensus 206 v~lmv~l~~--p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~ 283 (530)
T 3ufb_A 206 VRFMVEVMD--PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPR 283 (530)
T ss_dssp HHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCE
T ss_pred HHHHHHhhc--cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCcccc
Confidence 344444444 3456799999999999988765432 1356899998 766666552 23445
Q ss_pred EeecCCCC-CC------CcceEEEecccccc---------CC-----hHHHHHHHHHHHHhcC-------CCCceEEEEe
Q 018565 236 HVGGDMFD-GV------PEADAAIIKWVLHD---------WG-----DDECIKILKNCKEAIT-------KDKGKVIIVE 287 (354)
Q Consensus 236 ~~~~d~~~-~~------~~~D~i~~~~~lh~---------~~-----~~~~~~~L~~~~~~L~-------p~gG~lli~e 287 (354)
+..+|.+. +. ..||+|+.+-.+.. ++ .+....++..+.+.|| | ||++.++-
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~-gGr~avVl 362 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN-GGRAAVVV 362 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS-CCEEEEEE
T ss_pred ccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC-CceEEEEe
Confidence 67788776 31 14999999755531 11 1122356777777776 7 89888864
No 349
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=96.12 E-value=0.0042 Score=48.79 Aligned_cols=66 Identities=18% Similarity=0.253 Sum_probs=49.3
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.++..|... +++|..+||+.+++++..+.+.++-|...|+++..... |. ...+.+|+.|+.+.
T Consensus 41 ~~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~lT~~G~~~~ 108 (148)
T 3nrv_A 41 TEWRIISVLSSA-SDCSVQKISDILGLDKAAVSRTVKKLEEKKYIEVNGHSEDKRTYAINLTEMGQELY 108 (148)
T ss_dssp HHHHHHHHHHHS-SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCBEECHHHHHHH
T ss_pred HHHHHHHHHHcC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCCCcceeEeEECHhHHHHH
Confidence 456677778764 69999999999999999999999999999999877421 10 13477887775443
No 350
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=96.09 E-value=0.0033 Score=49.59 Aligned_cols=66 Identities=15% Similarity=0.137 Sum_probs=48.5
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~ 104 (354)
.++.|+..|...++++|..+||+.+++++..+.++++-|...|++++..... ++ .+.+|+.|+.+.
T Consensus 40 ~q~~vL~~l~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~-D~R~~~~~LT~~G~~~~ 108 (150)
T 3fm5_A 40 RSYSVLVLACEQAEGVNQRGVAATMGLDPSQIVGLVDELEERGLVVRTLDPS-DRRNKLIAATEEGRRLR 108 (150)
T ss_dssp HHHHHHHHHHHSTTCCCSHHHHHHHTCCHHHHHHHHHHHHTTTSEEC------------CEECHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeeCCcc-ccchheeeECHHHHHHH
Confidence 4566777776544578999999999999999999999999999998865210 12 277888776444
No 351
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=96.09 E-value=0.008 Score=46.23 Aligned_cols=47 Identities=13% Similarity=0.178 Sum_probs=39.3
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
++.|+.+||+.+|+++..++++|+.|...|+++.... ..|.|+++..
T Consensus 25 ~~~s~~ela~~~~i~~~~v~~il~~L~~~Glv~~~~g--~~ggy~L~~~ 71 (129)
T 2y75_A 25 GPTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSIRG--AYGGYVLGSE 71 (129)
T ss_dssp CCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEC------CCEEESSC
T ss_pred CcCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEecCC--CCCceEeCCC
Confidence 6899999999999999999999999999999987641 0367887754
No 352
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=96.08 E-value=0.0036 Score=49.41 Aligned_cols=75 Identities=17% Similarity=0.183 Sum_probs=54.8
Q ss_pred HHHHHHHhhhHHHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CCCceEecC
Q 018565 19 VEIWKYVFGFTNMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QGSMAFQQT 97 (354)
Q Consensus 19 ~~l~~~~~~~~~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~~~~y~~t 97 (354)
.+.++.+.+.|...+|.. |.. ++.+..||++.+|+++..+.+.|+.|...|++++.... +..-.|++|
T Consensus 15 ~~~l~~l~~~w~l~IL~~---------L~~--g~~~~~eLa~~lgis~~tls~~L~~Le~~GlI~r~~~~~d~~~~y~LT 83 (146)
T 2f2e_A 15 ARPLDVIGDGWSMLIVRD---------AFE--GLTRFGEFQKSLGLAKNILAARLRNLVEHGVMVAVPAESGSHQEYRLT 83 (146)
T ss_dssp TTTHHHHCSSSHHHHHHH---------HHT--TCCSHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSSSCEEEEEC
T ss_pred HHHHHHhCCchHHHHHHH---------HHh--CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEEecCCCCeEEEEEC
Confidence 345555556665555443 333 68999999999999999999999999999999887521 111258999
Q ss_pred cccchhh
Q 018565 98 PLSRRLM 104 (354)
Q Consensus 98 ~~~~~l~ 104 (354)
+.++.+.
T Consensus 84 ~~G~~l~ 90 (146)
T 2f2e_A 84 DKGRALF 90 (146)
T ss_dssp HHHHTTH
T ss_pred chHHHHH
Confidence 8876444
No 353
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=95.97 E-value=0.011 Score=46.52 Aligned_cols=66 Identities=14% Similarity=0.155 Sum_probs=50.4
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceee--ccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKE--VPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~--~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.++++-|...|++++ .....+ .-.+.+|+.++.+.
T Consensus 42 ~~~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~~~d~R~~~~~LT~~G~~~~ 111 (154)
T 2qww_A 42 QQLAMINVIYST-PGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLS 111 (154)
T ss_dssp HHHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEESCC--CTTCTTCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCcCCCCCCceeEeEECHHHHHHH
Confidence 456677778764 6899999999999999999999999999999998 321100 12488888876443
No 354
>2zkz_A Transcriptional repressor PAGR; protein-DNA, HTH motif, dimer, DN binding, transcription regulation; 2.00A {Bacillus anthracis}
Probab=95.92 E-value=0.0037 Score=45.74 Aligned_cols=64 Identities=9% Similarity=0.105 Sum_probs=46.1
Q ss_pred HHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 33 VVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 33 ~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
+|....++.|+..|... ++.|+.|||+.+|+++..+++.|+.|... ++..... +....|++++.
T Consensus 23 aL~~~~Rl~IL~~l~~~-~~~~~~ela~~l~is~stvs~hL~~L~~~-lv~~~~~-gr~~~y~l~~~ 86 (99)
T 2zkz_A 23 TMAHPMRLKIVNELYKH-KALNVTQIIQILKLPQSTVSQHLCKMRGK-VLKRNRQ-GLEIYYSINNP 86 (99)
T ss_dssp HHCSHHHHHHHHHHHHH-SCEEHHHHHHHHTCCHHHHHHHHHHHBTT-TBEEEEE-TTEEEEECCCH
T ss_pred HhCCHHHHHHHHHHHHC-CCcCHHHHHHHHCcCHHHHHHHHHHHHHH-hhhheEe-CcEEEEEEChH
Confidence 33444566666444332 79999999999999999999999999999 9876542 00124777754
No 355
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=95.92 E-value=0.0054 Score=47.72 Aligned_cols=48 Identities=21% Similarity=0.133 Sum_probs=43.6
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchh
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRL 103 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l 103 (354)
++.|..+||+.+|+++..+.+.|+.|...|+++... +.|.+|+.++.+
T Consensus 30 ~~~s~~ela~~l~is~~tv~~~l~~Le~~Gli~r~~-----~~~~Lt~~g~~~ 77 (139)
T 2x4h_A 30 EGAKINRIAKDLKIAPSSVFEEVSHLEEKGLVKKKE-----DGVWITNNGTRS 77 (139)
T ss_dssp SCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-----TEEEECHHHHHH
T ss_pred CCcCHHHHHHHhCCChHHHHHHHHHHHHCCCEEecC-----CeEEEChhHHHH
Confidence 689999999999999999999999999999999876 679999887644
No 356
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=95.90 E-value=0.01 Score=47.79 Aligned_cols=68 Identities=12% Similarity=0.088 Sum_probs=50.8
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhhc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLMR 105 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~~ 105 (354)
.++.|+..|...++++|..+||+.+++++..+.++++-|...|+|++....++ .-.+.+|+.|+.+..
T Consensus 54 ~q~~vL~~L~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 123 (166)
T 3deu_A 54 THWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLIA 123 (166)
T ss_dssp HHHHHHHHHHHSCSSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHCCCHhhHHHHHHHHHHCCCEEeeCCCCCCCeeEEEECHHHHHHHH
Confidence 45667777765336899999999999999999999999999999998752110 124788888764443
No 357
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.90 E-value=0.005 Score=47.66 Aligned_cols=65 Identities=12% Similarity=0.171 Sum_probs=50.8
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..+||+.+|+++..+.+.|+.|...|+++...... ++ .|.+|+.++.+.
T Consensus 39 ~~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~L~~~glv~r~~~~~-d~R~~~~~lT~~G~~~~ 106 (140)
T 2nnn_A 39 TQWAALVRLGET-GPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPD-DGRRLLVSLSPAGRAEL 106 (140)
T ss_dssp HHHHHHHHHHHH-SSBCHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEETT-EEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCC-CCCeeeeEECHhHHHHH
Confidence 456678888654 699999999999999999999999999999998863110 12 377888776443
No 358
>2lkp_A Transcriptional regulator, ARSR family; symmetric homodimer, NI(II) binding protein, DNA binding Pro transcription regulator; NMR {Mycobacterium tuberculosis}
Probab=95.89 E-value=0.011 Score=44.54 Aligned_cols=52 Identities=19% Similarity=0.295 Sum_probs=44.5
Q ss_pred HHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 33 VVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 33 ~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
++....++.|+..|.+ ++.|+.+||+.+|+++..+.+.|+.|...|++....
T Consensus 28 ~l~~~~~~~il~~L~~--~~~s~~ela~~l~is~stvsr~l~~Le~~Glv~~~~ 79 (119)
T 2lkp_A 28 ALATPSRLMILTQLRN--GPLPVTDLAEAIGMEQSAVSHQLRVLRNLGLVVGDR 79 (119)
T ss_dssp HHCCHHHHHHHHHHHH--CCCCHHHHHHHHSSCHHHHHHHHHHHHHHCSEEEEE
T ss_pred HhCCHHHHHHHHHHHH--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 3444567778888876 689999999999999999999999999999997664
No 359
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=95.88 E-value=0.0073 Score=46.83 Aligned_cols=67 Identities=10% Similarity=0.156 Sum_probs=49.9
Q ss_pred HHcChhhhhhhCCC-CCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGS-PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~-~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|...++ ++|..+||+.+++++..+.+.++.|...|+++.....++ .-.+.+|+.++.+.
T Consensus 35 ~~~~iL~~l~~~~~~~~~~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~i~lT~~G~~~~ 104 (141)
T 3bro_A 35 TQMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLE 104 (141)
T ss_dssp HHHHHHHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTH
T ss_pred HHHHHHHHHHHCCCCCcCHHHHHHHHCCCcchHHHHHHHHHHCCCEEeeCCCcCCCeeeeEECHHHHHHH
Confidence 34556777766422 799999999999999999999999999999987642110 11477888776443
No 360
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=95.83 E-value=0.0064 Score=46.97 Aligned_cols=65 Identities=15% Similarity=0.233 Sum_probs=49.9
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~ 104 (354)
.++.++..|... ++.|..+||+.+++++..+.+.++.|...|+++..... .++ .|.+|+.++.+.
T Consensus 30 ~~~~iL~~l~~~-~~~~~~ela~~l~~s~~tvs~~l~~L~~~glv~~~~~~-~d~R~~~~~lT~~G~~~~ 97 (138)
T 3bpv_A 30 AQVACLLRIHRE-PGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDP-ENRRRYILEVTRRGEEII 97 (138)
T ss_dssp HHHHHHHHHHHS-TTCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEEEEECHHHHHTH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCC-CCceeEEeeECHhHHHHH
Confidence 445567777664 79999999999999999999999999999999885411 012 277787775443
No 361
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=95.81 E-value=0.0056 Score=47.73 Aligned_cols=66 Identities=20% Similarity=0.260 Sum_probs=50.9
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.++++.|...|++++.... |. .-.+.+|+.|+.+.
T Consensus 38 ~~~~iL~~l~~~-~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 105 (143)
T 3oop_A 38 EQWSVLEGIEAN-EPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKET 105 (143)
T ss_dssp HHHHHHHHHHHH-SSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHHCCCHhhHHHHHHHHHHCCCeeccCCCccCceeeeeECHHHHHHH
Confidence 456677777654 79999999999999999999999999999999876421 10 12478888876444
No 362
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=95.79 E-value=0.037 Score=42.98 Aligned_cols=65 Identities=14% Similarity=0.134 Sum_probs=50.2
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.++..|. . ++.|..+||+.+++++..+.+.|+.|...|+++..... |. .-.+.+|+.++.+.
T Consensus 38 ~~~~iL~~l~-~-~~~~~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~r~~~~~lT~~G~~~~ 104 (146)
T 2gxg_A 38 LDFLVLRATS-D-GPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETF 104 (146)
T ss_dssp HHHHHHHHHT-T-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHh-c-CCcCHHHHHHHhCCCchhHHHHHHHHHHCCCEEeecCCCCCceEEEEECHHHHHHH
Confidence 4566777777 3 79999999999999999999999999999999876421 10 12377888776443
No 363
>1bja_A Transcription regulatory protein MOTA; activation domain, middle mode transcription, alpha helical structure, transcription regulation; 2.19A {Enterobacteria phage T4} SCOP: a.4.5.9 PDB: 1i1s_A
Probab=95.79 E-value=0.0066 Score=43.69 Aligned_cols=62 Identities=13% Similarity=0.098 Sum_probs=50.6
Q ss_pred HHcChhhhhhhCCCCCCHHHHHh-HcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhhc
Q 018565 38 VELGIAEAVEEKGSPITLNELAS-ALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLMR 105 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~-~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~ 105 (354)
.++.|+-.|.+. ++.|+.+||+ .++++...+.|-++.|...|+++.++ ++ +.+|+.|+.+..
T Consensus 17 ~QfsiL~~L~~~-~~~t~~~Lae~~l~~drstvsrnl~~L~r~GlVe~~~----~D-l~LT~~G~~~l~ 79 (95)
T 1bja_A 17 KTATILITIAKK-DFITAAEVREVHPDLGNAVVNSNIGVLIKKGLVEKSG----DG-LIITGEAQDIIS 79 (95)
T ss_dssp HHHHHHHHHHHS-TTBCHHHHHHTCTTSCHHHHHHHHHHHHTTTSEEEET----TE-EEECHHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHhcccHHHHHHHHHHHHHCCCeecCC----CC-eeeCHhHHHHHH
Confidence 345667777775 5999999999 99999999999999999999999434 24 999998874443
No 364
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=95.79 E-value=0.0097 Score=47.08 Aligned_cols=61 Identities=16% Similarity=0.110 Sum_probs=46.4
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
..+|++.+.+... .. ++.|+++||+.+++++..++++|..|...|+++.... .|.|+++..
T Consensus 14 ~yAl~~L~~La~~---~~--~~~~~~~iA~~~~i~~~~l~kil~~L~~~Glv~s~rG---~GGy~L~~~ 74 (149)
T 1ylf_A 14 SIAVHILSILKNN---PS--SLCTSDYMAESVNTNPVVIRKIMSYLKQAGFVYVNRG---PGGAGLLKD 74 (149)
T ss_dssp HHHHHHHHHHHHS---CG--GGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC------CCEEESSC
T ss_pred HHHHHHHHHHHhC---CC--CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEEccC---CCceEeCCC
Confidence 3456666555432 22 6899999999999999999999999999999987652 377888754
No 365
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=95.78 E-value=0.0065 Score=41.23 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=49.1
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
.+-.|++.|.++|.|++..+||+.+|++..-+...|..|-..|.+....+ -.|.++
T Consensus 20 ~eekVLe~LkeaG~PlkageIae~~GvdKKeVdKaik~LKkEgkI~SPkR----Cyw~~~ 75 (80)
T 2lnb_A 20 LEQRILQVLTEAGSPVKLAQLVKECQAPKRELNQVLYRMKKELKVSLTSP----ATWCLG 75 (80)
T ss_dssp HHHHHHHHHHHHTSCEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEET----TEEEES
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHCCCHHHHHHHHHHHHHcCCccCCCC----ceeeCC
Confidence 35567888887778999999999999999999999999999999998875 467765
No 366
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=95.77 E-value=0.0095 Score=46.42 Aligned_cols=65 Identities=15% Similarity=0.177 Sum_probs=49.5
Q ss_pred HcChhhhh-hhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 39 ELGIAEAV-EEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 39 ~lglf~~L-~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
++.|+..| .. .++.|..+||+.+++++..+.+.++-|...|+++......+ .-.+.+|+.++.+.
T Consensus 39 ~~~iL~~l~~~-~~~~t~~~la~~l~~s~~~vs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 106 (146)
T 2fbh_A 39 RWLVLLHLARH-RDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLI 106 (146)
T ss_dssp HHHHHHHHHHC-SSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBTTBCSCEEEECTTHHHHH
T ss_pred HHHHHHHHHHc-CCCCCHHHHHHHhCCChhhHHHHHHHHHHCCCeeecCCCcccCeeeeEECHhHHHHH
Confidence 45577777 44 37999999999999999999999999999999988642100 12377887776443
No 367
>2obp_A Putative DNA-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.70A {Ralstonia eutropha} SCOP: a.4.5.71
Probab=95.76 E-value=0.008 Score=43.48 Aligned_cols=52 Identities=17% Similarity=0.158 Sum_probs=43.2
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccch
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRR 102 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~ 102 (354)
++.+..+||+.++++...+.|.|..|...|+++.....|+-+...+|+.++.
T Consensus 35 ~~~s~~eLa~~l~l~~stLsR~l~rLe~~GLV~r~~~~D~R~~v~LT~~G~~ 86 (96)
T 2obp_A 35 TPWSLPKIAKRAQLPMSVLRRVLTQLQAAGLADVSVEADGRGHASLTQEGAA 86 (96)
T ss_dssp CCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTSCEEEEECHHHHH
T ss_pred CCcCHHHHHHHhCCchhhHHHHHHHHHHCCCEEeecCCCCceeEEECHHHHH
Confidence 6889999999999999999999999999999998654333345777877753
No 368
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=95.75 E-value=0.008 Score=47.81 Aligned_cols=67 Identities=12% Similarity=0.157 Sum_probs=49.5
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.|+..|....+++|..+||+.+++++..+.++++-|...|++++.... |. .-.+.+|+.|+.+.
T Consensus 48 ~~~~iL~~L~~~~~~~~~~ela~~l~i~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 116 (160)
T 3boq_A 48 AKFDAMAQLARNPDGLSMGKLSGALKVTNGNVSGLVNRLIKDGMVVKAMSADDRRSFSAKLTDAGLTTF 116 (160)
T ss_dssp HHHHHHHHHHHCTTCEEHHHHHHHCSSCCSCHHHHHHHHHHHTSEEEC--------CEEEECHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCCCCCeEEEEEChhHHHHH
Confidence 456688888322379999999999999999999999999999999886421 00 11377888776443
No 369
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=95.74 E-value=0.032 Score=43.78 Aligned_cols=64 Identities=6% Similarity=0.166 Sum_probs=47.2
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeec---cCCCC-CceEecCcccchhh
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEV---PTSQG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~---~~~~~-~~~y~~t~~~~~l~ 104 (354)
++.++..| .. ++.|..+||+.+++++..+.++++.|...|+++.. ++.|. .-.+.+|+.|+.+.
T Consensus 40 q~~iL~~l-~~-~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~~~D~R~~~~~lT~~G~~~~ 107 (151)
T 3kp7_A 40 QSHVLNML-SI-EALTVGQITEKQGVNKAAVSRRVKKLLNAELVKLEKPDSNTDQRLKIIKLSNKGKKYI 107 (151)
T ss_dssp HHHHHHHH-HH-SCBCHHHHHHHHCSCSSHHHHHHHHHHHTTSEEC-----------CCBEECHHHHHHH
T ss_pred HHHHHHHH-Hc-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCCCCCeeEEEECHhHHHHH
Confidence 45578888 43 79999999999999999999999999999999973 22110 11367777775443
No 370
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=95.71 E-value=0.0073 Score=47.20 Aligned_cols=66 Identities=6% Similarity=0.014 Sum_probs=51.7
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..+||+.+++++..+.++++-|...|++++.....+ .-.+.+|+.|+.+.
T Consensus 32 ~q~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 99 (145)
T 3g3z_A 32 NLFAVLYTLATE-GSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYA 99 (145)
T ss_dssp HHHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECCCSSCGGGSCEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeccCCCCCceeeeeEChhHHHHH
Confidence 456677788654 6899999999999999999999999999999997642110 12488888886543
No 371
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=95.69 E-value=0.0074 Score=47.52 Aligned_cols=66 Identities=17% Similarity=0.232 Sum_probs=50.9
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+|+++..+.+.|+-|...|+++..... |. .-.+.+|+.++.+.
T Consensus 41 ~~~~iL~~l~~~-~~~t~~ela~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~ 108 (152)
T 3bj6_A 41 GQRAILEGLSLT-PGATAPQLGAALQMKRQYISRILQEVQRAGLIERRTNPEHARSHRYWLTPRGEAII 108 (152)
T ss_dssp HHHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCSSSTTSCEEEECHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeecCCcccccceeeEEChhhHHHH
Confidence 456677777764 68999999999999999999999999999999886421 10 12477888776433
No 372
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=95.66 E-value=0.0055 Score=46.79 Aligned_cols=49 Identities=20% Similarity=0.297 Sum_probs=41.3
Q ss_pred HHcChhhhhhhCCCC-CCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSP-ITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~-~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|+..|...++| +|+.|||+.+++++..+.|.|+.|...|++.+..
T Consensus 27 ~e~~il~~L~~~~~~~~t~~eLa~~l~~s~sTV~r~L~~L~~~GlV~r~~ 76 (123)
T 3r0a_A 27 ADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQ 76 (123)
T ss_dssp HHHHHHHHHHHSTTCCEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeeC
Confidence 355667777654456 9999999999999999999999999999998763
No 373
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=95.66 E-value=0.008 Score=46.55 Aligned_cols=67 Identities=15% Similarity=0.105 Sum_probs=50.5
Q ss_pred HHcChhhhhhhCC-CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKG-SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~-~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.++..|...+ ++.|..+||+.+++++..+.++++-|...|++++.... |. .-.+.+|+.|+.+.
T Consensus 32 ~~~~vL~~l~~~~~~~~t~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~D~R~~~~~LT~~G~~~~ 101 (139)
T 3eco_A 32 EQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLV 101 (139)
T ss_dssp HHHHHHHHHHHSTTTCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC--CCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCCCCCCeeeeEECHHHHHHH
Confidence 4566777776542 48999999999999999999999999999999876421 10 12377888776444
No 374
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.65 E-value=0.016 Score=52.63 Aligned_cols=83 Identities=8% Similarity=0.008 Sum_probs=58.6
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc---CCCeEEeecCCCC-C-C----Cc-----------
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK---CHGVEHVGGDMFD-G-V----PE----------- 247 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---~~~v~~~~~d~~~-~-~----~~----------- 247 (354)
+...|||||.|.|.++..|+++...-+++++++ +..+...++ .++++++.+|+++ + + .+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~~~~~l~~~~~l~~~~~~~~ 137 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWSTYSNLIDEERIFVPEVQSS 137 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHHHHHHHTTTTCSSCCCCCCT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccchhhHHHhhccccccccccccc
Confidence 357899999999999999998744457888888 666555543 5789999999976 3 1 11
Q ss_pred ----ceEEEeccccccCChHHHHHHHHH
Q 018565 248 ----ADAAIIKWVLHDWGDDECIKILKN 271 (354)
Q Consensus 248 ----~D~i~~~~~lh~~~~~~~~~~L~~ 271 (354)
-.+.++.|.-++.+.+-..++|..
T Consensus 138 ~~~~~~~~vvaNLPYnIstpil~~ll~~ 165 (353)
T 1i4w_A 138 DHINDKFLTVANVTGEGSEGLIMQWLSC 165 (353)
T ss_dssp TSEEEEEEEEEECCSTTHHHHHHHHHHH
T ss_pred ccCCCceEEEEECCCchHHHHHHHHHHh
Confidence 124566676666666555566654
No 375
>2pg4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, DNA binding protein; HET: MSE CIT; 2.21A {Aeropyrum pernix} SCOP: a.4.5.48
Probab=95.65 E-value=0.0045 Score=44.82 Aligned_cols=63 Identities=24% Similarity=0.200 Sum_probs=45.4
Q ss_pred hhhhhhhCCCCCCHHHHHhHcCCCccc-HHHHHHHHhccCceeeccCCCCCceEecCcccchhh
Q 018565 42 IAEAVEEKGSPITLNELASALKCDPSL-LQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLM 104 (354)
Q Consensus 42 lf~~L~~~~~~~t~~elA~~~g~~~~~-l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~ 104 (354)
++..|...+++.|..+||+.+++++.. +.+.|+.|...|+++....+.-.-.+.+|+.|+.+.
T Consensus 20 ~L~~l~~~~~~~t~~eLa~~l~is~~t~vs~~l~~Le~~Glv~~~~~drR~~~~~LT~~G~~~~ 83 (95)
T 2pg4_A 20 TLLEFEKKGYEPSLAEIVKASGVSEKTFFMGLKDRLIRAGLVKEETLSYRVKTLKLTEKGRRLA 83 (95)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHCCCHHHHHTTHHHHHHHTTSEEEEEEETTEEEEEECHHHHHHH
T ss_pred HHHHHHhcCCCCCHHHHHHHHCCCchHHHHHHHHHHHHCCCeecCCCCCCeEEEEECHhHHHHH
Confidence 444454432389999999999999999 999999999999998432100012477888776444
No 376
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=95.61 E-value=0.0095 Score=46.56 Aligned_cols=67 Identities=21% Similarity=0.217 Sum_probs=51.1
Q ss_pred HHHcChhhhhhh-CCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 37 AVELGIAEAVEE-KGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 37 a~~lglf~~L~~-~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
..++.|+..|.. . ++.|..+||+.+|+++..+.+.++.|...|++++.... |+ .-.+.+|+.|+.+.
T Consensus 35 ~~~~~iL~~l~~~~-~~~~~~~la~~l~i~~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 104 (147)
T 2hr3_A 35 FSQLVVLGAIDRLG-GDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNL 104 (147)
T ss_dssp HHHHHHHHHHHHTT-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCCCHHHHHHHhCCChhhHHHHHHHHHHCCCEeeCCCCCCCCceeeEECHHHHHHH
Confidence 355677888875 4 79999999999999999999999999999999886421 10 12377888776443
No 377
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=95.59 E-value=0.018 Score=45.58 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=49.5
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhhc
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLMR 105 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~~ 105 (354)
++.++..|...+++.+..+||+.+++++..+.++++-|...|++++....+ ++ .+.+|+.|+.+..
T Consensus 33 q~~vL~~L~~~~~~~~~~eLa~~l~~~~~tvs~~v~~Le~~GlV~R~~~~~-DrR~~~l~LT~~G~~~~~ 101 (151)
T 4aik_A 33 HWVTLYNINRLPPEQSQIQLAKAIGIEQPSLVRTLDQLEEKGLITRHTSAN-DRRAKRIKLTEQSSPIIE 101 (151)
T ss_dssp HHHHHHHHHHSCTTSCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSS-CTTCEEEEECGGGHHHHH
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHCcCHHHHHHHHHHHHhCCCeEeecCCC-CCcchhhhcCHHHHHHHH
Confidence 345566665444567889999999999999999999999999998765211 22 3788888864443
No 378
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=95.59 E-value=0.0079 Score=46.86 Aligned_cols=65 Identities=15% Similarity=0.127 Sum_probs=49.8
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
++.++..|... +++|..+||+.+++++..+.+.++-|...|++.......+ .-.+.+|+.++.+.
T Consensus 31 ~~~iL~~l~~~-~~~t~~~la~~l~~s~~~vs~~l~~Le~~gli~r~~~~~d~R~~~~~lT~~G~~~~ 97 (144)
T 1lj9_A 31 QYLYLVRVCEN-PGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVY 97 (144)
T ss_dssp HHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-cCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCCCCCceeeeEEChhHHHHH
Confidence 45567777664 6899999999999999999999999999999988642100 12377888776443
No 379
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=95.58 E-value=0.021 Score=45.00 Aligned_cols=65 Identities=11% Similarity=0.192 Sum_probs=49.6
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
++.|+..|... ++.|..+||+.+++++..+.+.|+-|...|+++..... |. .-.+.+|+.++.+.
T Consensus 39 ~~~iL~~l~~~-~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 105 (155)
T 1s3j_A 39 QLFVLASLKKH-GSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIKF 105 (155)
T ss_dssp HHHHHHHHHHH-SEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeecCCCCCCceEEEEECHHHHHHH
Confidence 45577777654 68999999999999999999999999999999886421 10 11377887775443
No 380
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=95.56 E-value=0.0071 Score=46.73 Aligned_cols=66 Identities=17% Similarity=0.231 Sum_probs=50.2
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.++..|... ++.|..+||+.+++++..+.+.++-|...|+++......+ .-.+.+|+.|+.+.
T Consensus 35 ~~~~iL~~l~~~-~~~~~~~la~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~ 102 (138)
T 1jgs_A 35 AQFKVLCSIRCA-ACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAIC 102 (138)
T ss_dssp HHHHHHHHHHHH-SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCCHHHHHHHHCCChHHHHHHHHHHHHCCCEEecCCcccCceeEeEEChhHHHHH
Confidence 345567777653 6899999999999999999999999999999988642110 11378888876444
No 381
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=95.56 E-value=0.023 Score=45.18 Aligned_cols=66 Identities=12% Similarity=0.117 Sum_probs=50.8
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.++++-|...|++++.....+ .-.+.+|+.|+.+.
T Consensus 54 ~q~~vL~~l~~~-~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 121 (161)
T 3e6m_A 54 PKLRLLSSLSAY-GELTVGQLATLGVMEQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKL 121 (161)
T ss_dssp HHHHHHHHHHHH-SEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC---CCCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCcccCCeeEeeECHHHHHHH
Confidence 455677778654 6999999999999999999999999999999987752110 12478888876444
No 382
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=95.56 E-value=0.014 Score=45.41 Aligned_cols=64 Identities=17% Similarity=0.229 Sum_probs=50.5
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++ |..+||+.+++++..+.+.++.|...|++++.... .++ .+.+|+.|+.+.
T Consensus 38 ~~~~iL~~l~~~-~~-~~~~la~~l~~~~~tvs~~l~~Le~~Glv~r~~~~-~D~R~~~~~LT~~G~~~~ 104 (144)
T 3f3x_A 38 LDFSILKATSEE-PR-SMVYLANRYFVTQSAITAAVDKLEAKGLVRRIRDS-KDRRIVIVEITPKGRQVL 104 (144)
T ss_dssp HHHHHHHHHHHS-CE-EHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CC-CHHHHHHHHCCChhHHHHHHHHHHHCCCEEeccCC-CCCceEEEEECHHHHHHH
Confidence 456788888774 45 99999999999999999999999999999887521 011 388888876444
No 383
>3u1d_A Uncharacterized protein; GNTR-superfamily, structural genomics, PSI-biology, midwest for structural genomics, MCSG; 1.80A {Halomicrobium mukohataei}
Probab=95.54 E-value=0.057 Score=42.40 Aligned_cols=85 Identities=13% Similarity=0.107 Sum_probs=58.2
Q ss_pred HHcChhhhhhhCC-CCCCHHHHHhHcC-CCcccHHHHHHHHhccCceeeccCCC---CCc----eEecCcccc-hhhcCC
Q 018565 38 VELGIAEAVEEKG-SPITLNELASALK-CDPSLLQRIMRFLIHLKFFKEVPTSQ---GSM----AFQQTPLSR-RLMRHG 107 (354)
Q Consensus 38 ~~lglf~~L~~~~-~~~t~~elA~~~g-~~~~~l~~lL~~L~~~g~l~~~~~~~---~~~----~y~~t~~~~-~l~~~~ 107 (354)
.++.|+..|.... +..|+++|++.++ +++..+.+.|+.|+..|++++....+ +.| .|++|+.++ .|....
T Consensus 30 tR~~IL~~Ll~~p~~~~ta~eL~~~l~~lS~aTVyrhL~~L~eaGLV~~~~~~~~~~~rGrP~k~Y~LT~~Gr~~l~~y~ 109 (151)
T 3u1d_A 30 TRLDVLHQILAQPDGVLSVEELLYRNPDETEANLRYHVDELVDRGIVEKIPVPRAKSVDDPPTTFYAVTGEGIALLRAVS 109 (151)
T ss_dssp HHHHHHHHHHHSTTSCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEECCCCTTSSSCCCEEEEECHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHCCCeEEeecCcCcccCCCCceEEEECHHHHHHHHHhH
Confidence 4555666664421 4589999999999 99999999999999999998653211 012 699999986 443321
Q ss_pred CcchHHHHHHhcCchhhhhhhhHHHhH
Q 018565 108 ENNMAAFILLESSPVMLAPWHSLGTRV 134 (354)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~l~~~l 134 (354)
.+ ....+|..|.+.+
T Consensus 110 --~l----------a~~~alr~l~~~v 124 (151)
T 3u1d_A 110 --MY----------EEAAVWRSVYEQM 124 (151)
T ss_dssp --CS----------THHHHTHHHHHHS
T ss_pred --HH----------hHHHHHHHHHHHh
Confidence 00 1225677777766
No 384
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=95.53 E-value=0.014 Score=46.69 Aligned_cols=62 Identities=15% Similarity=0.151 Sum_probs=46.5
Q ss_pred HHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 32 AVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 32 ~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
.+|++.+.+... .. +++.|+++||+.+++++..++++|..|...|+++.... ..|.|+++..
T Consensus 28 yAlr~L~~LA~~---~~-~~~~s~~eIA~~~~i~~~~l~kil~~L~~aGlv~s~rG--~~GGy~Lar~ 89 (159)
T 3lwf_A 28 YGLTITLELAKR---IG-DGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRG--AHGGYVLNGD 89 (159)
T ss_dssp HHHHHHHHHHHT---TT-SCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECS--TTCEEEECSC
T ss_pred HHHHHHHHHHhc---CC-CCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCeEEEecC--CCCceEecCC
Confidence 455555544331 11 26899999999999999999999999999999987652 1467887753
No 385
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=95.53 E-value=0.0073 Score=46.98 Aligned_cols=66 Identities=11% Similarity=0.223 Sum_probs=50.8
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..+||+.+++++..+.+.|+.|...|+++......+ .-.+.+|+.++.+.
T Consensus 38 ~~~~iL~~l~~~-~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~ 105 (142)
T 2bv6_A 38 PQFLVLTILWDE-SPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIR 105 (142)
T ss_dssp HHHHHHHHHHHS-SEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCCCcceEEEEEChHHHHHH
Confidence 456677788764 6899999999999999999999999999999987652111 11477787775433
No 386
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=95.51 E-value=0.038 Score=43.79 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=49.2
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
+.|+..|... +++|..+||+.+++++..+.++++-|...|++++.....+ .-.+.+|+.|+.+.
T Consensus 53 ~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~ 118 (159)
T 3s2w_A 53 FPFLMRLYRE-DGINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLE 118 (159)
T ss_dssp HHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC---CCEEEEECHHHHHHH
T ss_pred HHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCCCCeeEEEECHHHHHHH
Confidence 4566777654 7899999999999999999999999999999987742110 11477888776444
No 387
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=95.50 E-value=0.024 Score=45.47 Aligned_cols=67 Identities=9% Similarity=0.072 Sum_probs=48.4
Q ss_pred HHcChhhhhhhC-CCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhhc
Q 018565 38 VELGIAEAVEEK-GSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLMR 105 (354)
Q Consensus 38 ~~lglf~~L~~~-~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~~ 105 (354)
.++.|+..|... ++++|..+||+.+++++..+.++++-|...|+|++.... .++ .+.+|+.|+.+..
T Consensus 47 ~q~~vL~~l~~~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~-~DrR~~~l~LT~~G~~~~~ 117 (168)
T 3u2r_A 47 QQYNTLRLLRSVHPEGMATLQIADRLISRAPDITRLIDRLDDRGLVLRTRKP-ENRRVVEVALTDAGLKLLK 117 (168)
T ss_dssp HHHHHHHHHHHHTTSCEEHHHHHHHC---CTHHHHHHHHHHHTTSEEEEEET-TEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEeecCCC-CCCCeeEeEECHHHHHHHH
Confidence 456677777653 259999999999999999999999999999999877421 012 3778888764443
No 388
>2qvo_A Uncharacterized protein AF_1382; PSI, structural genomics, southeast collaboratory for structural genomics; 1.85A {Archaeoglobus fulgidus dsm 4304} PDB: 3o3k_A 3ov8_A
Probab=95.48 E-value=0.0064 Score=44.00 Aligned_cols=49 Identities=12% Similarity=0.103 Sum_probs=40.7
Q ss_pred CCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhh
Q 018565 52 PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLM 104 (354)
Q Consensus 52 ~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~ 104 (354)
++|..+||+.+++++..+.++|+.|...|++.... ++ .|++|+.|+.+.
T Consensus 30 ~~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv~~~~----d~R~~~v~LT~~G~~~~ 81 (95)
T 2qvo_A 30 DVYIQYIASKVNSPHSYVWLIIKKFEEAKMVECEL----EGRTKIIRLTDKGQKIA 81 (95)
T ss_dssp CEEHHHHHHHSSSCHHHHHHHHHHHHHTTSEEEEE----ETTEEEEEECHHHHHHH
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCcCccCCC----CCCeEEEEEChhHHHHH
Confidence 39999999999999999999999999999994333 23 488998876444
No 389
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=95.47 E-value=0.01 Score=47.26 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=49.0
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.+.|+-|...|++++.... |+ ...|.+|+.++.+.
T Consensus 50 ~~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 117 (162)
T 2fa5_A 50 PEWRVITILALY-PGSSASEVSDRTAMDKVAVSRAVARLLERGFIRRETHGDDRRRSMLALSPAGRQVY 117 (162)
T ss_dssp HHHHHHHHHHHS-TTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCCEECHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeecCCCCCCeeEEEECHHHHHHH
Confidence 456678888764 79999999999999999999999999999999876411 10 12377787775443
No 390
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=95.47 E-value=0.0099 Score=46.63 Aligned_cols=66 Identities=11% Similarity=0.103 Sum_probs=50.2
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.++..|... ++.|..+||+.+++++..+.+.|+.|...|+++..... |. .-.+.+|+.++.+.
T Consensus 43 ~~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~ 110 (150)
T 2rdp_A 43 PQFVALQWLLEE-GDLTVGELSNKMYLACSTTTDLVDRMERNGLVARVRDEHDRRVVRIRLLEKGERII 110 (150)
T ss_dssp HHHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCC---CEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCCCcceeEeEECHhHHHHH
Confidence 345677777654 69999999999999999999999999999999876421 10 12377888776443
No 391
>3cjn_A Transcriptional regulator, MARR family; silicibacter pomeroy structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=95.47 E-value=0.0091 Score=47.60 Aligned_cols=66 Identities=17% Similarity=0.146 Sum_probs=50.9
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.++|+-|...|+++..... |. .-.|.+|+.++.+.
T Consensus 53 ~~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 120 (162)
T 3cjn_A 53 AKMRALAILSAK-DGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVY 120 (162)
T ss_dssp HHHHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC--CCSSEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 456678888764 68999999999999999999999999999999876421 10 12377887776433
No 392
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.46 E-value=0.091 Score=46.49 Aligned_cols=122 Identities=21% Similarity=0.146 Sum_probs=70.7
Q ss_pred CCceEEEecCCccHHHHH----HHHHCCCCeE--EEeec-h--------HHhhh----c----c--cCCCe--EEeecCC
Q 018565 189 GIETLVDIGGNDGTTLRT----LTKAFPRIRG--INFDL-P--------HVVCV----A----E--KCHGV--EHVGGDM 241 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~----l~~~~p~~~~--~~~D~-~--------~~~~~----a----~--~~~~v--~~~~~d~ 241 (354)
..-+|+|+|=|+|..... +.+..|+.+. +.++. + +.... . . ...++ ++.-||.
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 456899999999976543 2345677654 44442 1 10000 0 0 03444 4566787
Q ss_pred CC---CCC--cceEEEeccccccC-ChHHHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhccc
Q 018565 242 FD---GVP--EADAAIIKWVLHDW-GDDECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHT 315 (354)
Q Consensus 242 ~~---~~~--~~D~i~~~~~lh~~-~~~~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 315 (354)
.+ .++ .+|++++-..--.- |+=.-..++++++++++| ||.+.-. .
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~p-gg~laTY-------t--------------------- 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDE-KGYWVSY-------S--------------------- 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEE-EEEEEES-------C---------------------
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCC-CcEEEEE-------e---------------------
Confidence 65 233 38998884322111 111225789999999999 8876420 0
Q ss_pred CCcccCCHHHHHHHHHHcCCceeEEEEcCC
Q 018565 316 NKGKERSLKEWDYVLRQAGFSRYNITSIHA 345 (354)
Q Consensus 316 ~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~ 345 (354)
....+++-|+++||++.++-..++
T Consensus 227 ------aag~VRR~L~~aGF~V~k~~G~g~ 250 (308)
T 3vyw_A 227 ------SSLSVRKSLLTLGFKVGSSREIGR 250 (308)
T ss_dssp ------CCHHHHHHHHHTTCEEEEEECC--
T ss_pred ------CcHHHHHHHHHCCCEEEecCCCCC
Confidence 134557789999999887655544
No 393
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=95.42 E-value=0.0076 Score=46.98 Aligned_cols=65 Identities=14% Similarity=0.179 Sum_probs=50.7
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..+||+.+++++..+.+.++-|...|+++...... ++ .|.+|+.++.+.
T Consensus 34 ~~~~iL~~l~~~-~~~~~~~la~~l~~s~~tvs~~l~~L~~~glv~r~~~~~-d~r~~~~~lT~~G~~~~ 101 (145)
T 2a61_A 34 AQFDILQKIYFE-GPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPA-DRRAYFLVITRKGEEVI 101 (145)
T ss_dssp HHHHHHHHHHHH-CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETT-EEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCC-CCceEEEEECHHHHHHH
Confidence 456677777653 699999999999999999999999999999998864110 12 377888776444
No 394
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=95.36 E-value=0.011 Score=46.84 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=50.5
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.++|+.|...|++++.... |+ .-.+.+|+.|+.+.
T Consensus 44 ~~~~iL~~l~~~-~~~t~~ela~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~ 111 (155)
T 3cdh_A 44 PEWRVLACLVDN-DAMMITRLAKLSLMEQSRMTRIVDQMDARGLVTRVADAKDKRRVRVRLTDDGRALA 111 (155)
T ss_dssp HHHHHHHHHSSC-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC------CCCEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCCcCCeeEeEECHHHHHHH
Confidence 456677778654 68999999999999999999999999999999876421 10 12378888876443
No 395
>2h09_A Transcriptional regulator MNTR; transcription regulator, diphtheria toxin, manganese transport, structural genomics, NPPSFA; 2.10A {Escherichia coli}
Probab=95.34 E-value=0.012 Score=46.66 Aligned_cols=55 Identities=13% Similarity=0.213 Sum_probs=46.0
Q ss_pred hhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhh
Q 018565 45 AVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLM 104 (354)
Q Consensus 45 ~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~ 104 (354)
.|... ++.|..+||+.+|+++..+.+.|+.|...|+++... +..+.+|+.++.+.
T Consensus 48 ~l~~~-~~~~~~~la~~l~vs~~tvs~~l~~Le~~Glv~r~~----~~~~~lT~~g~~~~ 102 (155)
T 2h09_A 48 LIREV-GEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIP----WRGVFLTAEGEKLA 102 (155)
T ss_dssp HHHHH-SCCCHHHHHHHHTSCHHHHHHHHHHHHHTTCEEEET----TTEEEECHHHHHHH
T ss_pred HHHhC-CCcCHHHHHHHhCcCHHHHHHHHHHHHHCCCEEEec----CCceEEChhHHHHH
Confidence 44442 689999999999999999999999999999998876 36788998876443
No 396
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=95.33 E-value=0.0068 Score=47.16 Aligned_cols=66 Identities=11% Similarity=0.197 Sum_probs=50.3
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..+||+.+++++..+.++++.|...|++++....++ .-.+.+|+.|+.+.
T Consensus 37 ~q~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 104 (140)
T 3hsr_A 37 TGYIVLMAIEND-EKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIK 104 (140)
T ss_dssp HHHHHHHHSCTT-CEEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHTH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHHCCChhhHHHHHHHHHHCCCeEecCCCCCcceeeeeEChHHHHHH
Confidence 445667777653 7999999999999999999999999999999997742110 12478888876444
No 397
>2eth_A Transcriptional regulator, putative, MAR family; MARR family, structural genomics, joint center for structura genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: a.4.5.28
Probab=95.33 E-value=0.014 Score=46.08 Aligned_cols=66 Identities=15% Similarity=0.083 Sum_probs=50.7
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..+||+.+++++..+.+.++.|...|+++..... |. .-.|.+|+.++.+.
T Consensus 45 ~~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 112 (154)
T 2eth_A 45 TELYAFLYVALF-GPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIF 112 (154)
T ss_dssp HHHHHHHHHHHH-CCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCcceeEEEECHHHHHHH
Confidence 456677777654 68999999999999999999999999999999886421 10 12377888776443
No 398
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=95.32 E-value=0.022 Score=45.72 Aligned_cols=61 Identities=18% Similarity=0.268 Sum_probs=46.4
Q ss_pred HHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 32 AVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 32 ~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
.+|++.+.+..- . ++++|.++||+.+++++..++++|..|...|+++.... ..|.|+++..
T Consensus 13 yAlr~l~~La~~---~--~~~~s~~~IA~~~~is~~~l~kil~~L~~aGlv~s~rG--~~GGy~Lar~ 73 (162)
T 3k69_A 13 VAVHSILYLDAH---R--DSKVASRELAQSLHLNPVMIRNILSVLHKHGYLTGTVG--KNGGYQLDLA 73 (162)
T ss_dssp HHHHHHHHHHTT---T--TSCBCHHHHHHHHTSCGGGTHHHHHHHHHTTSSEEECS--TTCEEECCSC
T ss_pred HHHHHHHHHHhC---C--CCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeecC--CCCCeEecCC
Confidence 455555544332 1 26899999999999999999999999999999977642 1367988754
No 399
>2qlz_A Transcription factor PF0095; 2.50A {Pyrococcus furiosus} PDB: 2quf_A
Probab=95.30 E-value=0.0048 Score=52.64 Aligned_cols=69 Identities=6% Similarity=0.105 Sum_probs=53.7
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceee-ccCCC--C--CceEecCcccc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKE-VPTSQ--G--SMAFQQTPLSR 101 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~-~~~~~--~--~~~y~~t~~~~ 101 (354)
+.+|....++.|+..|.. +|.|+.+||+.+|+++..+.+.|+.|...|++.. ..... | ...|++++.+.
T Consensus 6 lkaL~~~~R~~IL~~L~~--g~~s~~ELa~~lglS~stVs~hL~~Le~aGLV~~~~~~gr~~GRp~~~Y~Lt~~~~ 79 (232)
T 2qlz_A 6 FYILGNKVRRDLLSHLTC--MECYFSLLSSKVSVSSTAVAKHLKIMEREGVLQSYEKEERFIGPTKKYYKISIAKS 79 (232)
T ss_dssp HHHHTSHHHHHHHHHHTT--TTTCSSSSCTTCCCCHHHHHHHHHHHHHTTSEEEEEECC-----CEEEEEECCCEE
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeeecCCCCCCccEEEEEccchh
Confidence 455556677888888875 7999999999999999999999999999999987 33100 0 12488887664
No 400
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=95.29 E-value=0.017 Score=45.29 Aligned_cols=47 Identities=15% Similarity=0.153 Sum_probs=40.2
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
++.|+++||+.+++++..++++|..|...|+++.... ..|.|+++..
T Consensus 27 ~~~s~~~IA~~~~i~~~~l~kil~~L~~aGlv~s~rG--~~GGy~Lar~ 73 (143)
T 3t8r_A 27 GCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRG--AKGGYQLRVP 73 (143)
T ss_dssp CCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECSS--SSSEEEESSC
T ss_pred CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCEEEecCC--CCCCeeecCC
Confidence 5899999999999999999999999999999986641 1367888754
No 401
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=95.28 E-value=0.011 Score=46.36 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=42.8
Q ss_pred HHcChhhhhhhCC-CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKG-SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~-~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.++..|...+ +++|..+||+.+++++..+.++++-|...|++++....++ .-.+.+|+.|+.+.
T Consensus 42 ~q~~vL~~l~~~~~~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 111 (148)
T 3jw4_A 42 QQGRMIGYIYENQESGIIQKDLAQFFGRRGASITSMLQGLEKKGYIERRIPENNARQKNIYVLPKGAALV 111 (148)
T ss_dssp HHHHHHHHHHHHTTTCCCHHHHHHC------CHHHHHHHHHHTTSBCCC--------CCCCBCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEeeCCCCCchhheeeECHHHHHHH
Confidence 3455677776532 6899999999999999999999999999999987742100 11367777776444
No 402
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=95.25 E-value=0.01 Score=46.74 Aligned_cols=67 Identities=13% Similarity=0.142 Sum_probs=51.1
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhhc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLMR 105 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~~ 105 (354)
.++.|+..|... +++|..+||+.+++++..+.+.|+-|...|+++..... |. .-.+.+|+.++.+..
T Consensus 48 ~~~~iL~~l~~~-~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~~ 116 (153)
T 2pex_A 48 PQYLVMLVLWET-DERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTRAASDERQVIIALTETGRALRS 116 (153)
T ss_dssp HHHHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHGGG
T ss_pred HHHHHHHHHHhC-CCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCcccCCeeEeeECHHHHHHHH
Confidence 456677777764 68999999999999999999999999999999886421 00 124788888864443
No 403
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=95.25 E-value=0.0087 Score=48.19 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=51.1
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.+.++.|...|++++.....+ .-.+.+|+.++.+.
T Consensus 46 ~~~~iL~~L~~~-~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~ 113 (168)
T 2nyx_A 46 PQFRTLVILSNH-GPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVV 113 (168)
T ss_dssp HHHHHHHHHHHH-CSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHH
Confidence 456677788664 6999999999999999999999999999999988642111 12378888876443
No 404
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=95.25 E-value=0.019 Score=44.70 Aligned_cols=66 Identities=20% Similarity=0.280 Sum_probs=48.2
Q ss_pred HHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhh
Q 018565 37 AVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLM 104 (354)
Q Consensus 37 a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~ 104 (354)
..++.|+..|.. ++.|..+||+.+|+++..+.+.|+-|...|++++.... |+ .-.|.+|+.++.+.
T Consensus 38 ~~~~~iL~~l~~--~~~t~~eLa~~l~~s~~tvs~~l~~L~~~Glv~r~~~~~d~R~~~~~lT~~g~~~~ 105 (146)
T 3tgn_A 38 NTQEHILMLLSE--ESLTNSELARRLNVSQAAVTKAIKSLVKEGMLETSKDSKDARVIFYQLTDLARPIA 105 (146)
T ss_dssp HHHHHHHHHHTT--CCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC----------CCEECGGGHHHH
T ss_pred HHHHHHHHHHHh--CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeEeccCCCCCceeEEEECHhHHHHH
Confidence 355677788876 34999999999999999999999999999999876421 10 12477887775443
No 405
>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=95.21 E-value=0.037 Score=45.45 Aligned_cols=70 Identities=14% Similarity=0.231 Sum_probs=53.2
Q ss_pred HHHHcChhhhhhhC-CCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhhc
Q 018565 36 CAVELGIAEAVEEK-GSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLMR 105 (354)
Q Consensus 36 ~a~~lglf~~L~~~-~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~~ 105 (354)
+..++.|+..|... ++++|..+||+.+++++..+.++++.|...|+|++.....+ .-.+.+|+.|+.+..
T Consensus 40 t~~q~~vL~~L~~~~~~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~~ 112 (189)
T 3nqo_A 40 TSRQYMTILSILHLPEEETTLNNIARKMGTSKQNINRLVANLEKNGYVDVIPSPHDKRAINVKVTDLGKKVMV 112 (189)
T ss_dssp CHHHHHHHHHHHHSCGGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHHH
Confidence 34567777777642 26899999999999999999999999999999988642111 124889988864443
No 406
>1z91_A Organic hydroperoxide resistance transcriptional; OHRR, MARR family, bacterial transcription factor, DNA bindi protein; 2.50A {Bacillus subtilis} SCOP: a.4.5.28 PDB: 1z9c_A*
Probab=95.18 E-value=0.017 Score=45.02 Aligned_cols=67 Identities=12% Similarity=0.094 Sum_probs=51.9
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCC-CC-CceEecCcccchhhc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTS-QG-SMAFQQTPLSRRLMR 105 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~-~~~y~~t~~~~~l~~ 105 (354)
.++.|+..|... ++.|..+||+.+++++..+.+.++.|...|+++..... |. .-.+.+|+.|+.+..
T Consensus 41 ~~~~iL~~l~~~-~~~~~~~la~~l~~~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~LT~~G~~~~~ 109 (147)
T 1z91_A 41 PQYLALLLLWEH-ETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKE 109 (147)
T ss_dssp HHHHHHHHHHHH-SEEEHHHHHHTTTCCHHHHHHHHHHHHHHTSEECCBCSSCTTSBEEEECHHHHSGGG
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCcCcHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHhHHHHHH
Confidence 456677777654 68999999999999999999999999999999886421 10 123788988865443
No 407
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=95.17 E-value=0.02 Score=44.11 Aligned_cols=61 Identities=13% Similarity=0.180 Sum_probs=49.3
Q ss_pred HHHHcChhhhhhhCCCCCCHHHHHhHc-----CCCcccHHHHHHHHhccCceeeccCCCCCceEec
Q 018565 36 CAVELGIAEAVEEKGSPITLNELASAL-----KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQ 96 (354)
Q Consensus 36 ~a~~lglf~~L~~~~~~~t~~elA~~~-----g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~ 96 (354)
+.-+.-|++.|...+++.|++||.+.+ +++..-+.|.|+.|+..|++.+....++..+|..
T Consensus 10 T~qR~~Il~~l~~~~~~~sa~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~~~~~~~~~~y~~ 75 (131)
T 2o03_A 10 TRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGESVYRR 75 (131)
T ss_dssp HHHHHHHHHHHHHCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTTSEEEEECTTSCEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCCEEEEEeCCCceEEEe
Confidence 456677888887545799999999999 8999999999999999999988764333446754
No 408
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=95.09 E-value=0.0096 Score=46.83 Aligned_cols=66 Identities=15% Similarity=0.179 Sum_probs=49.7
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.++++.|...|++++.....+ .-.+.+|+.|+.+.
T Consensus 42 ~q~~iL~~l~~~-~~~~~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 109 (149)
T 4hbl_A 42 SQYLVMLTLWEE-NPQTLNSIGRHLDLSSNTLTPMLKRLEQSGWVKRERQQSDKRQLIITLTDNGQQQQ 109 (149)
T ss_dssp HHHHHHHHHHHS-SSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEC---------CEEEECSHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeCCCCCCcceeeeeECHHHHHHH
Confidence 456777888764 7999999999999999999999999999999997742100 12478888876443
No 409
>2p4w_A Transcriptional regulatory protein ARSR family; archaea, PHR, heat shock, transcriptional regulation, winged DNA binding; 2.60A {Pyrococcus furiosus} SCOP: a.4.5.64
Probab=95.09 E-value=0.018 Score=47.97 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=51.3
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCC---C-CceEecCccc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQ---G-SMAFQQTPLS 100 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~---~-~~~y~~t~~~ 100 (354)
..+|....++.|+..|.. +|.|+.+||+.+|+++..+.+.|+.|...|++....... + .-.|++|+.+
T Consensus 9 lkaL~~~~rl~IL~~L~~--~~~s~~eLa~~l~is~stvs~hLk~Le~~GLV~~~~~~~~~g~~~~~Y~Lt~~~ 80 (202)
T 2p4w_A 9 LDVLGNETRRRILFLLTK--RPYFVSELSRELGVGQKAVLEHLRILEEAGLIESRVEKIPRGRPRKYYMIKKGL 80 (202)
T ss_dssp HHHHHSHHHHHHHHHHHH--SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECCBTTBCCCEEEEECTTE
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEEEeeccCCCCceEEEEEChHH
Confidence 345555566677777765 799999999999999999999999999999998764210 0 1237777654
No 410
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=95.08 E-value=0.012 Score=43.19 Aligned_cols=48 Identities=15% Similarity=0.297 Sum_probs=41.3
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.++.|+..|... ++.|..+||+.+|+++..+.+.|+.|...|++....
T Consensus 21 ~~~~il~~l~~~-~~~s~~ela~~l~is~~tv~~~l~~L~~~glv~~~~ 68 (109)
T 1sfx_A 21 SDVRIYSLLLER-GGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREI 68 (109)
T ss_dssp HHHHHHHHHHHH-CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 455666677543 689999999999999999999999999999998765
No 411
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=95.07 E-value=0.016 Score=48.81 Aligned_cols=51 Identities=20% Similarity=0.330 Sum_probs=46.1
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhhc
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLMR 105 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~ 105 (354)
++++..+||+.+++++..+.+.|+-|...|++++.. ...+.+|+.|+.+..
T Consensus 19 ~~~~~~~lA~~l~vs~~tvs~~l~~Le~~GlV~r~~----~~~i~LT~~G~~~~~ 69 (214)
T 3hrs_A 19 NKITNKEIAQLMQVSPPAVTEMMKKLLAEELLIKDK----KAGYLLTDLGLKLVS 69 (214)
T ss_dssp SCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET----TTEEEECHHHHHHHH
T ss_pred CCcCHHHHHHHHCCChhHHHHHHHHHHHCCCEEEec----CCCeEECHHHHHHHH
Confidence 799999999999999999999999999999999987 378999999875543
No 412
>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomic protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=95.05 E-value=0.0083 Score=46.50 Aligned_cols=65 Identities=6% Similarity=0.032 Sum_probs=50.6
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~ 104 (354)
.++.|+..|... ++.|..+||+.+++++..+.+.++-|...|+++...... ++ .|.+|+.++.+.
T Consensus 37 ~~~~iL~~l~~~-~~~t~~ela~~l~~s~~~vs~~l~~Le~~glv~r~~~~~-d~R~~~~~lT~~G~~~~ 104 (142)
T 2fbi_A 37 QQWRVIRILRQQ-GEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPK-DQRRVYVNLTEKGQQCF 104 (142)
T ss_dssp HHHHHHHHHHHH-CSEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEETT-EEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeecCCC-CCCeeEEEECHHHHHHH
Confidence 456677777664 689999999999999999999999999999998764210 12 377888776443
No 413
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=95.04 E-value=0.024 Score=44.54 Aligned_cols=62 Identities=16% Similarity=0.143 Sum_probs=49.2
Q ss_pred HHHHcChhhhhhhCCCCCCHHHHHhHc-----CCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 36 CAVELGIAEAVEEKGSPITLNELASAL-----KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 36 ~a~~lglf~~L~~~~~~~t~~elA~~~-----g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
+..+.-|++.|...+++.|++||.+.+ +++..-+.|.|+.|...|++.+....++..+|.++
T Consensus 21 T~qR~~Il~~L~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~~ 87 (145)
T 2fe3_A 21 TPQRHAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDASSRFDFV 87 (145)
T ss_dssp CHHHHHHHHHHHHCSSCCCHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEEECCTTSCCEEEEC
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCChhhHHHHHHHHHHCCCEEEEeeCCCceEEECC
Confidence 345566888887645799999999999 88999999999999999999887643334457653
No 414
>2fbk_A Transcriptional regulator, MARR family; winged-helix-turn-helix; 2.30A {Deinococcus radiodurans} SCOP: a.4.5.28
Probab=94.83 E-value=0.013 Score=47.80 Aligned_cols=67 Identities=13% Similarity=0.172 Sum_probs=49.6
Q ss_pred HHcChhhhhhhCCCC--CCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSP--ITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~--~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|...++| +|..+||+.+++++..+.++|+-|...|++++.....+ .-.+.+|+.++.+.
T Consensus 70 ~~~~iL~~L~~~~~~~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~ 140 (181)
T 2fbk_A 70 AGWDLLLTLYRSAPPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERREDERDRRSASIRLTPQGRALV 140 (181)
T ss_dssp HHHHHHHHHHHHCCSSCBCHHHHHHHCSCCSGGGSSHHHHHHHHTSEECCC-------CCBEECHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 456678888764333 99999999999999999999999999999988642100 11377887776443
No 415
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=94.81 E-value=0.035 Score=43.53 Aligned_cols=60 Identities=8% Similarity=0.149 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 30 NMAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 30 ~~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
...+|++.+.+..- . ++ |+++||+.+++++..++++|..|...|+|+.... .|.|+++..
T Consensus 8 ~~yAl~~L~~La~~----~--~~-s~~~IA~~~~i~~~~l~kIl~~L~~aGlv~s~rG---~GGy~Lar~ 67 (145)
T 1xd7_A 8 LAVAIHILSLISMD----E--KT-SSEIIADSVNTNPVVVRRMISLLKKADILTSRAG---VPGASLKKD 67 (145)
T ss_dssp HHHHHHHHHHHHTC----S--CC-CHHHHHHHHTSCHHHHHHHHHHHHHTTSEECCSS---SSSCEESSC
T ss_pred HHHHHHHHHHHHhC----C--CC-CHHHHHHHHCcCHHHHHHHHHHHHHCCceEeecC---CCCceecCC
Confidence 34455555554321 2 35 9999999999999999999999999999987752 467877754
No 416
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=94.75 E-value=0.018 Score=36.51 Aligned_cols=47 Identities=6% Similarity=0.164 Sum_probs=42.4
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeec
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEV 85 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~ 85 (354)
|..|++.+..+||-+.+..+|++.|++++-+..+|+-|...|++.-+
T Consensus 12 e~~lL~yIr~sGGildI~~~a~kygV~kdeV~~~LrrLe~KGLI~le 58 (59)
T 2xvc_A 12 ERELLDYIVNNGGFLDIEHFSKVYGVEKQEVVKLLEALKNKGLIAVE 58 (59)
T ss_dssp HHHHHHHHHHTTSEEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcCCEEeHHHHHHHhCCCHHHHHHHHHHHHHCCCeecc
Confidence 55688999888788899999999999999999999999999998753
No 417
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.59 E-value=0.026 Score=50.02 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=34.2
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK 230 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~ 230 (354)
++..|||++||+|.++..+++. +.+++++|+ +.+++.+++
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 5679999999999999998876 568999999 888877764
No 418
>1uly_A Hypothetical protein PH1932; helix-turn-helix, structural genomics, DNA binding protein; 2.50A {Pyrococcus horikoshii} SCOP: a.4.5.58 PDB: 2cwe_A
Probab=94.56 E-value=0.03 Score=46.22 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=45.9
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeec
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEV 85 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~ 85 (354)
..++....+..|+..|.+ ++.|..+||+.+|+++..+.+.|+.|...|++...
T Consensus 14 ~k~l~d~~~~~IL~~L~~--~~~s~~eLA~~lglS~stv~~~l~~Le~~GlI~~~ 66 (192)
T 1uly_A 14 IKVMLEDTRRKILKLLRN--KEMTISQLSEILGKTPQTIYHHIEKLKEAGLVEVK 66 (192)
T ss_dssp HHHHHSHHHHHHHHHHTT--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHhCCHHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 334445667788888874 79999999999999999999999999999999877
No 419
>1ku9_A Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii} SCOP: a.4.5.36
Probab=94.55 E-value=0.025 Score=44.14 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=42.9
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCc
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTP 98 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~ 98 (354)
..++..|....+|.|+.+||+.+|+++..+.++|+.|...|+++.....++...|.++.
T Consensus 29 ~~il~~L~~~~~~~t~~ela~~l~~~~stvs~~l~~L~~~G~v~r~~~~~d~r~~~~~~ 87 (152)
T 1ku9_A 29 GAVYAILYLSDKPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWIKGERKNYYEAV 87 (152)
T ss_dssp HHHHHHHHHCSSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCTTCSSCEEEEC
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCCceEEEeec
Confidence 33455553112789999999999999999999999999999998863111123455554
No 420
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=94.51 E-value=0.018 Score=42.71 Aligned_cols=47 Identities=17% Similarity=0.258 Sum_probs=39.3
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeec
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEV 85 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~ 85 (354)
++.|+..+...|.+.|..+||+.+|+++..+++.|..|...|+++..
T Consensus 20 ~l~Il~~l~~~g~~~s~~eLa~~lgvs~~tV~~~L~~L~~~GlV~~~ 66 (110)
T 1q1h_A 20 VIDVLRILLDKGTEMTDEEIANQLNIKVNDVRKKLNLLEEQGFVSYR 66 (110)
T ss_dssp THHHHHHHHHHCSCBCHHHHHHTTTSCHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 45566666432348999999999999999999999999999999876
No 421
>4g6q_A Putative uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.08A {Kribbella flavida}
Probab=94.49 E-value=0.013 Score=47.99 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=52.0
Q ss_pred HHHHHHHHcChhhhhhhCCCCCCHHHHHhHcC-CCcccHHHHHHHHhccCceeeccCC--CC--CceEecCcccch
Q 018565 32 AVVKCAVELGIAEAVEEKGSPITLNELASALK-CDPSLLQRIMRFLIHLKFFKEVPTS--QG--SMAFQQTPLSRR 102 (354)
Q Consensus 32 ~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g-~~~~~l~~lL~~L~~~g~l~~~~~~--~~--~~~y~~t~~~~~ 102 (354)
.+|.--.++.|+..|.. +|.|+.+||+.+| ++...+++.|+.|...|+|+..... .| +..|++++.+-.
T Consensus 18 ~~La~P~Rl~il~~L~~--~~~~~~~l~~~l~~~~~~~~s~Hl~~L~~aglv~~~~e~~~~g~~er~y~~~~~~~~ 91 (182)
T 4g6q_A 18 DLLHHPLRWRITQLLIG--RSLTTRELAELLPDVATTTLYRQVGILVKAGVLMVTAEHQVRGAVERTYTLNTQAGD 91 (182)
T ss_dssp HHTTSHHHHHHHHHTTT--SCEEHHHHHHHCTTBCHHHHHHHHHHHHHHTSEEEEEEEEETTEEEEEEEECTTTTT
T ss_pred HHhCCHHHHHHHHHHHh--CCCCHHHHHHHhcCCCHHHHHHHHHHHHHCCCeEEEEeecccCcceeEEEecccccc
Confidence 34455577788888875 7999999999996 8999999999999999999765421 01 234877765533
No 422
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=94.42 E-value=0.038 Score=42.84 Aligned_cols=61 Identities=10% Similarity=0.152 Sum_probs=48.0
Q ss_pred HHHcChhhhhhhCC-CCCCHHHHHhHc-----CCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 37 AVELGIAEAVEEKG-SPITLNELASAL-----KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 37 a~~lglf~~L~~~~-~~~t~~elA~~~-----g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
..+.-|++.|...+ ++.|++||.+.+ +++..-+.|.|+.|+..|++.+....++..+|.++
T Consensus 18 ~qR~~Il~~L~~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~~ 84 (136)
T 1mzb_A 18 LPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELA 84 (136)
T ss_dssp HHHHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSEEEECSSSSSCEEEES
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHhhCCCCCHHHHHHHHHHHHHCCcEEEEEeCCCceEEEeC
Confidence 35566888887654 689999999998 88999999999999999999887643334567653
No 423
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=94.34 E-value=0.041 Score=42.83 Aligned_cols=62 Identities=15% Similarity=0.177 Sum_probs=49.3
Q ss_pred HHHHcChhhhhhhCCCCCCHHHHHhHc-----CCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 36 CAVELGIAEAVEEKGSPITLNELASAL-----KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 36 ~a~~lglf~~L~~~~~~~t~~elA~~~-----g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
+.-+.-|++.|....++.|++||.+.+ +++..-+.|.|+.|+..|++.+....+|..+|...
T Consensus 13 T~qR~~Il~~L~~~~~h~sa~eI~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~g~~~Y~~~ 79 (139)
T 3mwm_A 13 TRQRAAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVDVLRTAEGESVYRRC 79 (139)
T ss_dssp HHHHHHHHHHHTTCSSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSSEEEECTTSCEEEECC
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCCEEEEEcCCCceEEEEC
Confidence 456677888887655799999999988 68899999999999999999887643334567654
No 424
>2frh_A SARA, staphylococcal accessory regulator A; winged-helix protein, divalent metal binding, transcription; 2.50A {Staphylococcus aureus} SCOP: a.4.5.28 PDB: 2fnp_A 1fzp_D
Probab=94.32 E-value=0.019 Score=43.83 Aligned_cols=67 Identities=10% Similarity=0.248 Sum_probs=50.1
Q ss_pred HHcChhhhhhhC-CCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEK-GSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~-~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.++..|... +++.|..+||+.+++++..+.++|+-|...|++++....++ .-.+.+|+.|+.+.
T Consensus 38 ~q~~vL~~l~~~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~i~LT~~G~~~~ 107 (127)
T 2frh_A 38 EEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKI 107 (127)
T ss_dssp HHHHHHHHHHHTCCSEEEHHHHHHHSSSHHHHHHHHHHHHHHTTSSCCBCCSSSSCCCEEECCSHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 345566777652 25899999999999999999999999999999988542111 12377888876444
No 425
>2fxa_A Protease production regulatory protein HPR; protease porduction, regulation, STR genomics, PSI, protein structure initiative; HET: PGE P6G 1PE; 2.40A {Bacillus subtilis} SCOP: a.4.5.28
Probab=94.29 E-value=0.017 Score=48.30 Aligned_cols=66 Identities=12% Similarity=-0.024 Sum_probs=50.7
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC--CceEecCcccchhh
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG--SMAFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~--~~~y~~t~~~~~l~ 104 (354)
.++.|+..|... +++|..+||+.+++++..+.++|+.|...|++.+.....+ .-.+.+|+.|+.+.
T Consensus 49 ~q~~iL~~L~~~-~~~t~~eLa~~l~i~~stvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~ 116 (207)
T 2fxa_A 49 NEHHILWIAYQL-NGASISEIAKFGVMHVSTAFNFSKKLEERGYLRFSKRLNDKRNTYVQLTEEGTEVF 116 (207)
T ss_dssp HHHHHHHHHHHH-TSEEHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEECC------CEEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCCCCCceEEEEECHHHHHHH
Confidence 345667777654 6999999999999999999999999999999988752100 11478888886444
No 426
>1okr_A MECI, methicillin resistance regulatory protein MECI; bacterial antibiotic resistance, MECI protein, transcriptional regulatory element; 2.4A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1sax_A 1sd7_A 2d45_A 1sd6_A
Probab=94.14 E-value=0.013 Score=44.35 Aligned_cols=61 Identities=10% Similarity=0.134 Sum_probs=45.9
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcC----CCcccHHHHHHHHhccCceeeccCCCCCce---EecCcccchhh
Q 018565 40 LGIAEAVEEKGSPITLNELASALK----CDPSLLQRIMRFLIHLKFFKEVPTSQGSMA---FQQTPLSRRLM 104 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g----~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~---y~~t~~~~~l~ 104 (354)
+.|+..|... ++.|..+||+.++ +++..+.++|+-|...|++++... +.+ +.+|+.++.+.
T Consensus 13 ~~vL~~l~~~-~~~t~~ela~~l~~~~~~s~~tv~~~l~~L~~~Glv~r~~~---~rr~~~~~lT~~g~~~~ 80 (123)
T 1okr_A 13 WEVMNIIWMK-KYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRKKD---NKIFQYYSLVEESDIKY 80 (123)
T ss_dssp HHHHHHHHHH-SSEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHTSEEEEEE---TTEEEEEESSCHHHHHH
T ss_pred HHHHHHHHhC-CCcCHHHHHHHHhccCCCcHhhHHHHHHHHHHCCCeEEEec---CCeEEEEEecCHHHHHH
Confidence 4455555442 7999999999999 779999999999999999988762 232 35677665444
No 427
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=94.14 E-value=0.035 Score=43.70 Aligned_cols=48 Identities=19% Similarity=0.145 Sum_probs=41.5
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|+..|... ++.|..+||+.+|+++..+.+.|+.|...|++....
T Consensus 8 ~~~~iL~~L~~~-~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 55 (150)
T 2w25_A 8 IDRILVRELAAD-GRATLSELATRAGLSVSAVQSRVRRLESRGVVQGYS 55 (150)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEE
Confidence 345677777764 789999999999999999999999999999997654
No 428
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=94.13 E-value=0.03 Score=44.12 Aligned_cols=48 Identities=17% Similarity=0.214 Sum_probs=42.2
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|+..|... ++.|..+||+.+|+++..+.+.|+.|...|++....
T Consensus 4 ~~~~il~~L~~~-~~~~~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 51 (150)
T 2pn6_A 4 IDLRILKILQYN-AKYSLDEIAREIRIPKATLSYRIKKLEKDGVIKGYY 51 (150)
T ss_dssp HHHHHHHHHTTC-TTSCHHHHHHHHTSCHHHHHHHHHHHHHTTSSCCCC
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEEEE
Confidence 456788888764 689999999999999999999999999999998653
No 429
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=94.13 E-value=0.036 Score=43.33 Aligned_cols=47 Identities=23% Similarity=0.406 Sum_probs=41.3
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
+..|++.|... ++.|..|||+.+|+++..+.+.|+.|...|++....
T Consensus 7 d~~il~~L~~~-~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 53 (144)
T 2cfx_A 7 DLNIIEELKKD-SRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYT 53 (144)
T ss_dssp HHHHHHHHHHC-SCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEe
Confidence 45677888764 789999999999999999999999999999998654
No 430
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=94.08 E-value=0.021 Score=44.95 Aligned_cols=65 Identities=14% Similarity=0.232 Sum_probs=40.6
Q ss_pred HcChhhhhhhC----CCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCC-CceEecCcccchh
Q 018565 39 ELGIAEAVEEK----GSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQG-SMAFQQTPLSRRL 103 (354)
Q Consensus 39 ~lglf~~L~~~----~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~-~~~y~~t~~~~~l 103 (354)
++.++..|... ++++|..+||+.+++++..+.++++-|...|++...++.|. .-...+|+.|+.+
T Consensus 35 q~~vL~~l~~~~~~~~~~~t~~eLa~~l~~~~~tvsr~v~~Le~~glVr~~~~~DrR~~~v~LT~~G~~~ 104 (148)
T 4fx0_A 35 QFSTLAVISLSEGSAGIDLTMSELAARIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAA 104 (148)
T ss_dssp HHHHHHHHHC---------CHHHHHHHHTCCHHHHHHHHHHHHHTTSBC-----------CCBCHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeeCCCCCCeeEEEECHHHHHH
Confidence 34455555432 14689999999999999999999999999999965443210 1136777776543
No 431
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=94.06 E-value=0.05 Score=42.97 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=49.5
Q ss_pred HHHHcChhhhhhhCCCCCCHHHHHhHc-----CCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 36 CAVELGIAEAVEEKGSPITLNELASAL-----KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 36 ~a~~lglf~~L~~~~~~~t~~elA~~~-----g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
+.-+.-|++.|...+++.|++||.+.+ +++..-+.|.|+.|+..|++.+....++..+|..+
T Consensus 26 T~qR~~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~~ 92 (150)
T 2xig_A 26 SKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFISVLETSKSGRRYEIA 92 (150)
T ss_dssp HHHHHHHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEETTTEEEEEES
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCcEEEEEeCCCceEEEec
Confidence 556777888887655799999999998 78999999999999999999887643333457653
No 432
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=94.03 E-value=0.024 Score=39.63 Aligned_cols=48 Identities=23% Similarity=0.310 Sum_probs=40.2
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcC----CCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALK----CDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g----~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|++.|... ++.|+.||++.++ +++..+.++|+.|...|++.+..
T Consensus 10 ~e~~vL~~L~~~-~~~t~~ei~~~l~~~~~~s~~Tv~~~l~rL~~kGlv~r~~ 61 (82)
T 1p6r_A 10 AELEVMKVIWKH-SSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHK 61 (82)
T ss_dssp HHHHHHHHHHTS-SSEEHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHcC-CCCCHHHHHHHHhhcCCccHHHHHHHHHHHHHCCCeEEEe
Confidence 345566666553 7999999999996 68899999999999999998876
No 433
>2k4b_A Transcriptional regulator; DNA binding protein, winged helix; NMR {Lactococcus lactis subsp}
Probab=93.87 E-value=0.023 Score=41.44 Aligned_cols=48 Identities=8% Similarity=0.149 Sum_probs=40.5
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCC----CcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKC----DPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~----~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.++.|+..|-+. +++|+.||++.++. ++.-+.++|+-|+..|+|.+..
T Consensus 36 ~e~~VL~~L~~~-~~~t~~eL~~~l~~~~~~s~sTVt~~L~rLe~KGlV~R~~ 87 (99)
T 2k4b_A 36 AELIVMRVIWSL-GEARVDEIYAQIPQELEWSLATVKTLLGRLVKKEMLSTEK 87 (99)
T ss_dssp SCSHHHHHHHHH-SCEEHHHHHHTCCGGGCCCHHHHHHHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHhcccCCCHhhHHHHHHHHHHCCCEEEEe
Confidence 356677777653 69999999999974 5789999999999999999876
No 434
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=93.82 E-value=0.044 Score=43.80 Aligned_cols=48 Identities=19% Similarity=0.272 Sum_probs=41.5
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|++.|... ++.|..|||+.+|+++..+.+.|+.|...|++....
T Consensus 11 ~~~~il~~L~~~-~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 58 (162)
T 2p5v_A 11 TDIKILQVLQEN-GRLTNVELSERVALSPSPCLRRLKQLEDAGIVRQYA 58 (162)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEeeec
Confidence 345677777764 789999999999999999999999999999998654
No 435
>1j5y_A Transcriptional regulator, biotin repressor famil; structural genomics, TM1602, BIOT repressor family, JCSG, conserved hypothetical protein; 2.30A {Thermotoga maritima} SCOP: a.4.5.1 d.94.2.1
Probab=93.77 E-value=0.075 Score=43.58 Aligned_cols=58 Identities=16% Similarity=0.240 Sum_probs=47.3
Q ss_pred HHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCc-eeeccCCCCCceEecCcc
Q 018565 37 AVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKF-FKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 37 a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~-l~~~~~~~~~~~y~~t~~ 99 (354)
-....|++.|...++++|+.+||+.+|++++.+.+-|+.|...|+ +.... +.|.+++.
T Consensus 21 ~R~~~Il~~L~~~~~~~s~~eLa~~l~vS~~Ti~rdi~~L~~~G~~I~~~~-----~Gy~l~~~ 79 (187)
T 1j5y_A 21 ERLKSIVRILERSKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYNIVATP-----RGYVLAGG 79 (187)
T ss_dssp HHHHHHHHHHHHCSSCBCHHHHHHHHTSCHHHHHHHHHHHHHHTCCCEEET-----TEEECCTT
T ss_pred HHHHHHHHHHHHcCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEEC-----CEEEECCc
Confidence 445678888875335799999999999999999999999999999 76643 66877754
No 436
>2esh_A Conserved hypothetical protein TM0937; APC5794, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.4.5.61
Probab=93.74 E-value=0.11 Score=39.15 Aligned_cols=69 Identities=19% Similarity=0.115 Sum_probs=51.9
Q ss_pred HHHHHHHcChhhhhhhCCCCCCHHHHHhHc------C--CCc-ccHHHHHHHHhccCceeeccCC-CCC--ceEecCccc
Q 018565 33 VVKCAVELGIAEAVEEKGSPITLNELASAL------K--CDP-SLLQRIMRFLIHLKFFKEVPTS-QGS--MAFQQTPLS 100 (354)
Q Consensus 33 ~l~~a~~lglf~~L~~~~~~~t~~elA~~~------g--~~~-~~l~~lL~~L~~~g~l~~~~~~-~~~--~~y~~t~~~ 100 (354)
++....++-|+..|.. +|.+.-+|++.+ + +++ ..+.+.|+-|...|+++..... ++. -.|++|+.|
T Consensus 9 ~~~~~~~~~IL~~L~~--~~~~gyel~~~l~~~g~~~~~is~~~tly~~L~~Le~~GlI~~~~~~~~~~~r~~Y~LT~~G 86 (118)
T 2esh_A 9 FRGWWLASTILLLVAE--KPSHGYELAERLAEFGIEIPGIGHMGNIYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQG 86 (118)
T ss_dssp HHHHHHHHHHHHHHHH--SCBCHHHHHHHHHTTCCSSTTCCCCCCHHHHHHHHHHTTSEEEEEECSSSSCEEEEEECHHH
T ss_pred cccchHHHHHHHHHHc--CCCCHHHHHHHHHHhCCcccCCCCcchHHHHHHHHHHCCCeEEEeecCCCCCceEEEEChHH
Confidence 3444566667777766 799999999998 3 899 9999999999999999876421 111 248999988
Q ss_pred chh
Q 018565 101 RRL 103 (354)
Q Consensus 101 ~~l 103 (354)
+.+
T Consensus 87 ~~~ 89 (118)
T 2esh_A 87 KLY 89 (118)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 437
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=93.71 E-value=0.028 Score=41.18 Aligned_cols=36 Identities=28% Similarity=0.392 Sum_probs=34.5
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
++.|..|||+.+|+++..+.+.|+.|...|+++...
T Consensus 35 ~~~t~~ela~~l~is~~tv~~~l~~L~~~g~v~~~~ 70 (109)
T 2d1h_A 35 KPITSEELADIFKLSKTTVENSLKKLIELGLVVRTK 70 (109)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeec
Confidence 789999999999999999999999999999999875
No 438
>3i71_A Ethanolamine utilization protein EUTK; helix-turn-helix, unknown function; HET: FLC; 2.10A {Escherichia coli}
Probab=93.68 E-value=0.13 Score=32.58 Aligned_cols=51 Identities=10% Similarity=0.118 Sum_probs=43.1
Q ss_pred hhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 44 EAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 44 ~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
..|.+-..++|+.|+|...|++-+..+.-|+.|...|-+.+.. .+|++.|-
T Consensus 10 all~s~~QGMTaGEVAA~f~w~Le~ar~aLeqLf~~G~LRKRs-----SRYrlkph 60 (68)
T 3i71_A 10 ALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRS-----SRYRLKPH 60 (68)
T ss_dssp HHHHHCTTCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-----CEEEECC-
T ss_pred HHHHHHhccccHHHHHHHhCCcHHHHHHHHHHHHhcchhhhhc-----cccccCcc
Confidence 3444333689999999999999999999999999999999998 79988763
No 439
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=93.60 E-value=0.046 Score=43.16 Aligned_cols=47 Identities=17% Similarity=0.227 Sum_probs=41.3
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
+..|+..|... ++.|..|||+.+|+++..+.+.|+.|...|++....
T Consensus 10 d~~il~~L~~~-~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 56 (152)
T 2cg4_A 10 DRGILEALMGN-ARTAYAELAKQFGVSPETIHVRVEKMKQAGIITGAR 56 (152)
T ss_dssp HHHHHHHHHHC-TTSCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHcCCcceEE
Confidence 45677788764 799999999999999999999999999999998654
No 440
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=93.50 E-value=0.052 Score=42.75 Aligned_cols=48 Identities=23% Similarity=0.355 Sum_probs=41.8
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|+..|... ++.|..+||+.+|+++..+.+.++.|...|++....
T Consensus 10 ~d~~il~~L~~~-~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 57 (151)
T 2dbb_A 10 VDMQLVKILSEN-SRLTYRELADILNTTRQRIARRIDKLKKLGIIRKFT 57 (151)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHTTSCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEE
Confidence 345677888764 789999999999999999999999999999998654
No 441
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=93.33 E-value=0.11 Score=35.30 Aligned_cols=52 Identities=15% Similarity=0.145 Sum_probs=41.0
Q ss_pred hhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 43 AEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 43 f~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
++.|.. ++..|+.+||.++|++...+.|.|--|...|.|...+.. +..|+.+
T Consensus 21 i~~L~~-~~~~Ta~~IAkkLg~sK~~vNr~LY~L~kkG~V~~~~~~--PP~W~~~ 72 (75)
T 1sfu_A 21 VLSLNT-NDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKMVPSN--PPKWFKN 72 (75)
T ss_dssp HHTSCT-TCEECHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEECCS--SCEEEEC
T ss_pred HHhCCC-CcchHHHHHHHHHCCCHHHHHHHHHHHHHCCCEecCCCC--CCCccCC
Confidence 346665 245999999999999999999999999999999877621 3455544
No 442
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=93.32 E-value=0.044 Score=43.23 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=41.6
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|++.|... ++.|..+||+.+|+++..+.+.|+.|...|++....
T Consensus 8 ~~~~il~~L~~~-~~~s~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 55 (151)
T 2cyy_A 8 IDKKIIKILQND-GKAPLREISKITGLAESTIHERIRKLRESGVIKKFT 55 (151)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHHCSCHHHHHHHHHHHHHHTSSCCCC
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEE
Confidence 345677778764 799999999999999999999999999999998654
No 443
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=93.28 E-value=0.06 Score=43.48 Aligned_cols=48 Identities=17% Similarity=0.228 Sum_probs=41.8
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|+..|... ++.|..|||+.+|+++..+.+.|+.|...|++....
T Consensus 18 ~d~~IL~~L~~~-~~~s~~eLA~~lglS~~tv~~~l~~L~~~G~I~~~~ 65 (171)
T 2ia0_A 18 LDRNILRLLKKD-ARLTISELSEQLKKPESTIHFRIKKLQERGVIERYT 65 (171)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeec
Confidence 445678888764 789999999999999999999999999999997653
No 444
>4b8x_A SCO5413, possible MARR-transcriptional regulator; winged helix motif; HET: CME; 1.25A {Streptomyces coelicolor}
Probab=93.22 E-value=0.035 Score=43.56 Aligned_cols=64 Identities=9% Similarity=0.145 Sum_probs=47.0
Q ss_pred cChhhhhhhC-CCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc---eEecCcccchhh
Q 018565 40 LGIAEAVEEK-GSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM---AFQQTPLSRRLM 104 (354)
Q Consensus 40 lglf~~L~~~-~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~---~y~~t~~~~~l~ 104 (354)
+.++..|... ++++|..+||+.+++++..+.++++-|...|++++....+ ++ .+.+|+.|+.+.
T Consensus 38 ~~vL~~L~~~~~~~~t~~eLa~~l~~~~~tvs~~v~~Le~~Glv~r~~~~~-DrR~~~l~LT~~G~~~~ 105 (147)
T 4b8x_A 38 YEALVLLTFSKSGELPMSKIGERLMVHPTSVTNTVDRLVRSGLVAKRPNPN-DGRGTLATITDKGREVV 105 (147)
T ss_dssp HHHHHHHHTSGGGEEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECC-----CEEEEECHHHHHHH
T ss_pred HHHHHHHHHCCCCCcCHHHHHHHHCCCHHHHHHHHHHHHhCCCEEEeecCC-cCceeEEEECHHHHHHH
Confidence 3445555321 2689999999999999999999999999999998775211 12 377888876443
No 445
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=93.20 E-value=0.054 Score=43.33 Aligned_cols=48 Identities=13% Similarity=0.146 Sum_probs=42.5
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|++.|..+ +++|..+||+.+|+++..+.+-++.|...|++....
T Consensus 4 ~d~~il~~L~~~-~~~s~~~la~~lg~s~~tv~~rl~~L~~~g~i~~~~ 51 (162)
T 3i4p_A 4 LDRKILRILQED-STLAVADLAKKVGLSTTPCWRRIQKMEEDGVIRRRV 51 (162)
T ss_dssp HHHHHHHHHTTC-SCSCHHHHHHHHTCCHHHHHHHHHHHHHTTSSCCCC
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeece
Confidence 456788889864 799999999999999999999999999999998654
No 446
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=93.07 E-value=0.053 Score=42.05 Aligned_cols=47 Identities=15% Similarity=0.194 Sum_probs=40.5
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
+..|+..|... ++.|..+||+.+|+++..+.+.|+.|...|++....
T Consensus 6 ~~~il~~L~~~-~~~~~~ela~~lg~s~~tv~~~l~~L~~~G~i~~~~ 52 (141)
T 1i1g_A 6 DKIILEILEKD-ARTPFTEIAKKLGISETAVRKRVKALEEKGIIEGYT 52 (141)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHHTSCHHHHHHHHHHHHHHTSSCCCC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEeccc
Confidence 45567777653 689999999999999999999999999999997654
No 447
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=92.98 E-value=0.051 Score=44.98 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=33.9
Q ss_pred CCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 50 GSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 50 ~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
+.|.|..|||+.+|++...+.+.|+.|...|++....
T Consensus 22 g~~~s~~eia~~lgl~~~tv~~~l~~Le~~G~i~~~~ 58 (196)
T 3k2z_A 22 GYPPSVREIARRFRITPRGALLHLIALEKKGYIERKN 58 (196)
T ss_dssp SSCCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECC-
T ss_pred CCCCCHHHHHHHcCCCcHHHHHHHHHHHHCCCEEecC
Confidence 3589999999999999999999999999999998875
No 448
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=92.97 E-value=0.058 Score=43.57 Aligned_cols=48 Identities=15% Similarity=0.196 Sum_probs=42.4
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|+..|... ++.|..|||+.+|+++..+.+.|+.|...|++....
T Consensus 28 ~d~~IL~~L~~~-~~~s~~eLA~~lglS~~tv~~rl~~L~~~G~I~~~~ 75 (171)
T 2e1c_A 28 IDKKIIKILQND-GKAPLREISKITGLAESTIHERIRKLRESGVIKKFT 75 (171)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSSCCCC
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeee
Confidence 556788888764 789999999999999999999999999999998654
No 449
>4esf_A PADR-like transcriptional regulator; PADR family, DNA binding protein, HTH fold; 2.20A {Bacillus cereus}
Probab=92.70 E-value=0.22 Score=37.35 Aligned_cols=69 Identities=14% Similarity=0.123 Sum_probs=52.0
Q ss_pred HHHHHHHHcChhhhhhhCCCCCCHHHHHhHc------CCCcccHHHHHHHHhccCceeeccCC--CCC--ceEecCcccc
Q 018565 32 AVVKCAVELGIAEAVEEKGSPITLNELASAL------KCDPSLLQRIMRFLIHLKFFKEVPTS--QGS--MAFQQTPLSR 101 (354)
Q Consensus 32 ~~l~~a~~lglf~~L~~~~~~~t~~elA~~~------g~~~~~l~~lL~~L~~~g~l~~~~~~--~~~--~~y~~t~~~~ 101 (354)
.+++-.+++-|+..|.. +|.+.-+|++.+ ++++..+...|+-|...|+++..... ++. -.|++|+.|+
T Consensus 6 ~l~~g~l~~~IL~lL~~--~p~~Gyei~~~l~~~g~~~is~gtlY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~LT~~G~ 83 (117)
T 4esf_A 6 EMLKGSLEGCVLEIISR--RETYGYEITRHLNDLGFTEVVEGTVYTILVRLEKKKLVNIEKKPSDMGPPRKFYSLNEAGR 83 (117)
T ss_dssp HHHHHHHHHHHHHHHHH--SCBCHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTCEEEEEEC-----CEEEEEECHHHH
T ss_pred HHHHChHHHHHHHHHHc--CCCCHHHHHHHHHHcCCCCCCccHHHHHHHHHHHCCCEEEEeecCCCCCCceEEEECHHHH
Confidence 34455566666777776 799999999998 78999999999999999999876311 111 1399999886
Q ss_pred h
Q 018565 102 R 102 (354)
Q Consensus 102 ~ 102 (354)
.
T Consensus 84 ~ 84 (117)
T 4esf_A 84 Q 84 (117)
T ss_dssp H
T ss_pred H
Confidence 3
No 450
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=92.63 E-value=0.62 Score=42.01 Aligned_cols=122 Identities=8% Similarity=0.008 Sum_probs=74.7
Q ss_pred CceEEEecCCccHHHHHHHHHCCCC-eEEEeec-hHHhhhccc-CCCeEEeecCCCC-C---CC--cceEEEeccccccC
Q 018565 190 IETLVDIGGNDGTTLRTLTKAFPRI-RGINFDL-PHVVCVAEK-CHGVEHVGGDMFD-G---VP--EADAAIIKWVLHDW 260 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~---~~--~~D~i~~~~~lh~~ 260 (354)
..+++|+-||.|.+...+.+..-.. .+.++|. +..++..+. .+...+..+|+.+ . ++ .+|+++.......|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 3689999999999999999874222 4678888 766666654 3445677888877 2 23 58999997776555
Q ss_pred ChH--------HHHHHHHH---HHHhcC--CCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHH
Q 018565 261 GDD--------ECIKILKN---CKEAIT--KDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWD 327 (354)
Q Consensus 261 ~~~--------~~~~~L~~---~~~~L~--p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~ 327 (354)
+.. ....++.+ +.+.++ | +++++|.+..-. + ..+.+.+.
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P---~~~~~ENV~~l~-----------------------~--~~~~~~i~ 133 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHILDILPRLQKLP---KYILLENVKGFE-----------------------V--SSTRDLLI 133 (343)
T ss_dssp --------------CHHHHHHHHGGGCSSCC---SEEEEEEETTGG-----------------------G--SHHHHHHH
T ss_pred hhcCCcCCccCccchHHHHHHHHHHHhcCCC---CEEEEeCCcccc-----------------------C--HHHHHHHH
Confidence 422 11123332 334455 6 577777663210 0 11356778
Q ss_pred HHHHHcCCceeE
Q 018565 328 YVLRQAGFSRYN 339 (354)
Q Consensus 328 ~ll~~aGf~~~~ 339 (354)
+.|++.||.+..
T Consensus 134 ~~l~~~GY~v~~ 145 (343)
T 1g55_A 134 QTIENCGFQYQE 145 (343)
T ss_dssp HHHHHTTEEEEE
T ss_pred HHHHHCCCeeEE
Confidence 888999987754
No 451
>1v4r_A Transcriptional repressor; helix-turn-helix, winged-helix, gene regulation; NMR {Streptomyces} SCOP: a.4.5.6
Probab=92.57 E-value=0.14 Score=37.23 Aligned_cols=53 Identities=9% Similarity=0.140 Sum_probs=41.5
Q ss_pred HHHHHHHcChhh-hhhhCCCCC-CHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 33 VVKCAVELGIAE-AVEEKGSPI-TLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 33 ~l~~a~~lglf~-~L~~~~~~~-t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+...++..|.+ .+.. +..+ |..+||+.+|++..-+++.|+.|...|+++...
T Consensus 15 ~l~~~i~~~I~~~~l~~-g~~lps~~eLa~~~~vSr~tvr~al~~L~~~Gli~~~~ 69 (102)
T 1v4r_A 15 DVATHFRTLIKSGELAP-GDTLPSVADIRAQFGVAAKTVSRALAVLKSEGLVSSRG 69 (102)
T ss_dssp HHHHHHHHHTTTTSCCT-TSBCCCHHHHHHHSSSCTTHHHHHTTTTTTSSCCEEET
T ss_pred HHHHHHHHHHHhCCCCC-cCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeC
Confidence 344445555665 3443 2455 999999999999999999999999999998776
No 452
>3cta_A Riboflavin kinase; structural genomics, transferase, PSI-2, protein structure initiative; 2.20A {Thermoplasma acidophilum dsm 1728} SCOP: a.4.5.28 b.43.5.2
Probab=92.56 E-value=0.058 Score=45.83 Aligned_cols=54 Identities=17% Similarity=0.108 Sum_probs=44.6
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhhc
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLMR 105 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~ 105 (354)
++.|+.++|+.+++++..+.+.++.|...|+|++.... ....+.+|+.|+.+..
T Consensus 26 ~~~s~s~aA~~L~isq~avSr~I~~LE~~~L~~R~~~~-R~~~v~LT~~G~~l~~ 79 (230)
T 3cta_A 26 AYLTSSKLADMLGISQQSASRIIIDLEKNGYITRTVTK-RGQILNITEKGLDVLY 79 (230)
T ss_dssp EECCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEECHHHHHHHH
T ss_pred CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEcC-CeEEEEECHHHHHHHH
Confidence 58999999999999999999999999999999988200 0167889998875543
No 453
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=92.47 E-value=1 Score=41.21 Aligned_cols=96 Identities=11% Similarity=0.087 Sum_probs=65.0
Q ss_pred ceEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHhhhccc-CCCeEEeecCCCC-C---C-------CcceEEEeccc
Q 018565 191 ETLVDIGGNDGTTLRTLTKAFPRIR-GINFDL-PHVVCVAEK-CHGVEHVGGDMFD-G---V-------PEADAAIIKWV 256 (354)
Q Consensus 191 ~~vLDvG~G~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~-~---~-------~~~D~i~~~~~ 256 (354)
.+++|+=||.|.++..+.++ +.+ +.++|. +..++..+. .+...++.+|+.+ . + +++|+++..-.
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 57999999999999999887 455 458888 666665554 4567788888876 2 2 35899998777
Q ss_pred cccCCh-------HHHHHHHH---HHHHhcCCCCceEEEEeeeeC
Q 018565 257 LHDWGD-------DECIKILK---NCKEAITKDKGKVIIVEAIIE 291 (354)
Q Consensus 257 lh~~~~-------~~~~~~L~---~~~~~L~p~gG~lli~e~~~~ 291 (354)
...|+. +....++. ++.+.++| +++++|.+..
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P---~~~v~ENV~g 122 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP---LFFLAENVPG 122 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHHHHHHHCC---SEEEEEECTT
T ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHHhCC---CEEEEecchH
Confidence 666541 11223333 34445678 7888887643
No 454
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=92.32 E-value=0.074 Score=45.85 Aligned_cols=67 Identities=10% Similarity=0.144 Sum_probs=50.7
Q ss_pred HHcChhhhhhhCCC-CCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc--eEecCcccchhh
Q 018565 38 VELGIAEAVEEKGS-PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM--AFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~~~-~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~--~y~~t~~~~~l~ 104 (354)
.++.|+..|...++ ++|..+||+.+++++..+.++++-|...|++++....++.. ...+|+.|+.+.
T Consensus 159 ~q~~vL~~L~~~~~~~~t~~eLa~~l~i~~~tvt~~v~rLe~~GlV~R~~~~~DrR~~~i~LT~~G~~~~ 228 (250)
T 1p4x_A 159 VEFTILAIITSQNKNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHA 228 (250)
T ss_dssp HHHHHHHHHHTTTTCCEEHHHHHHHSSSCHHHHHHHHHHHHHHTSSEEEECSSSTTCEEEECCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeeCCCCCCCeEEEEECHHHHHHH
Confidence 45667777865432 59999999999999999999999999999998875321111 377788776444
No 455
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=92.22 E-value=0.065 Score=42.29 Aligned_cols=60 Identities=17% Similarity=0.193 Sum_probs=46.6
Q ss_pred HHHcChhhhhhhCC-CCCCHHHHHhHc-----CCCcccHHHHHHHHhccCceeeccCCCCCceEec
Q 018565 37 AVELGIAEAVEEKG-SPITLNELASAL-----KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQ 96 (354)
Q Consensus 37 a~~lglf~~L~~~~-~~~t~~elA~~~-----g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~ 96 (354)
..+.-|++.|...+ ++.|++||.+.+ +++..-+.|.|+.|+..|++.+....++..+|.+
T Consensus 17 ~qR~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~ 82 (150)
T 2w57_A 17 LPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFEL 82 (150)
T ss_dssp HHHHHHHHHHTSGGGSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTSEEEEECGGGCEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHCCcEEEEEeCCCceEEEe
Confidence 34566788886544 689999999998 7889999999999999999988753222345764
No 456
>1fx7_A Iron-dependent repressor IDER; DTXR, iron-dependent regulator, signaling protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.4.5.24 a.76.1.1 b.34.1.2 PDB: 1u8r_A
Probab=91.88 E-value=0.066 Score=45.51 Aligned_cols=48 Identities=10% Similarity=0.049 Sum_probs=42.0
Q ss_pred CCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhh
Q 018565 53 ITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLM 104 (354)
Q Consensus 53 ~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~ 104 (354)
.+..+||+.+++++..+.+.|+-|...|++++.. +..+.+|+.++.+.
T Consensus 25 ~~~~~La~~l~vs~~tvs~~l~~Le~~GlV~r~~----~~~v~LT~~G~~~~ 72 (230)
T 1fx7_A 25 PLRARIAERLDQSGPTVSQTVSRMERDGLLRVAG----DRHLELTEKGRALA 72 (230)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECT----TSCEEECHHHHHHH
T ss_pred CcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeC----CccEEECHHHHHHH
Confidence 3459999999999999999999999999999987 36799999886444
No 457
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=91.87 E-value=0.1 Score=39.88 Aligned_cols=35 Identities=17% Similarity=0.102 Sum_probs=33.1
Q ss_pred CCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 52 PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 52 ~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
..|..+||+.+|+++..+.+.|+.|...|++....
T Consensus 51 ~ps~~~LA~~l~~s~~~V~~~l~~Le~kGlI~~~~ 85 (128)
T 2vn2_A 51 FPTPAELAERMTVSAAECMEMVRRLLQKGMIAIEE 85 (128)
T ss_dssp SCCHHHHHHTSSSCHHHHHHHHHHHHHTTSSEECC
T ss_pred CCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 47999999999999999999999999999999875
No 458
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=91.52 E-value=0.23 Score=37.14 Aligned_cols=69 Identities=10% Similarity=0.147 Sum_probs=52.2
Q ss_pred HHHHHHHHcChhhhhhhCCCCCCHHHHHhHc--------CCCcccHHHHHHHHhccCceeeccC--CCCC--ceEecCcc
Q 018565 32 AVVKCAVELGIAEAVEEKGSPITLNELASAL--------KCDPSLLQRIMRFLIHLKFFKEVPT--SQGS--MAFQQTPL 99 (354)
Q Consensus 32 ~~l~~a~~lglf~~L~~~~~~~t~~elA~~~--------g~~~~~l~~lL~~L~~~g~l~~~~~--~~~~--~~y~~t~~ 99 (354)
..++-.+++-|+..|.. +|.+.-+|.+.+ ++++..+...|+-|...|+++.... .+|. -.|++|+.
T Consensus 7 ~~~~g~l~~~IL~~L~~--~~~~Gyei~~~l~~~~~~~~~i~~gtly~~L~rLe~~GlI~~~~~~~~~~~~rk~Y~LT~~ 84 (116)
T 3f8b_A 7 EMLRAQTNVILLNVLKQ--GDNYVYGIIKQVKEASNGEMELNEATLYTIFKRLEKDGIISSYWGDESQGGRRKYYRLTEI 84 (116)
T ss_dssp HHHHHHHHHHHHHHHHH--CCBCHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHHTTSEEEEEEC----CCEEEEEECHH
T ss_pred HHHhchHHHHHHHHHHh--CCCCHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHCCCEEEEeeccCCCCCceEEEECHH
Confidence 45555667777777876 799999998887 7899999999999999999987631 1111 13899998
Q ss_pred cch
Q 018565 100 SRR 102 (354)
Q Consensus 100 ~~~ 102 (354)
|+.
T Consensus 85 G~~ 87 (116)
T 3f8b_A 85 GHE 87 (116)
T ss_dssp HHH
T ss_pred HHH
Confidence 863
No 459
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=91.48 E-value=0.12 Score=36.88 Aligned_cols=47 Identities=17% Similarity=0.189 Sum_probs=39.0
Q ss_pred cChhhhhhhCC-CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 40 LGIAEAVEEKG-SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 40 lglf~~L~~~~-~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
+.|+..|...+ .+++..+||++++++..-+.+.|+.|...|++.+..
T Consensus 23 ~~Vl~~I~~~g~~gi~qkeLa~~~~l~~~tvt~iLk~LE~kglIkr~~ 70 (91)
T 2dk5_A 23 KLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAVK 70 (91)
T ss_dssp HHHHHHHHHHCTTCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHcCCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEec
Confidence 44566665421 489999999999999999999999999999998554
No 460
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=91.42 E-value=1.5 Score=39.14 Aligned_cols=120 Identities=13% Similarity=0.105 Sum_probs=75.2
Q ss_pred CceEEEecCCccHHHHHHHHHCCCCe-EEEeec-hHHhhhccc-CCCeEEeecCCCC----CCCcceEEEeccccccCC-
Q 018565 190 IETLVDIGGNDGTTLRTLTKAFPRIR-GINFDL-PHVVCVAEK-CHGVEHVGGDMFD----GVPEADAAIIKWVLHDWG- 261 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~~p~~~-~~~~D~-~~~~~~a~~-~~~v~~~~~d~~~----~~~~~D~i~~~~~lh~~~- 261 (354)
..+++|+-||.|.++..+.+. +.+ +..+|. +..++..+. .+... .+|+.+ ..+++|+++.......|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ 86 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSI 86 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCT
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcch
Confidence 468999999999999999886 454 556787 666555543 11111 577765 245689999876665553
Q ss_pred --------hH---HHHHHHHHHHHhcCCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccCCHHHHHHHH
Q 018565 262 --------DD---ECIKILKNCKEAITKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKERSLKEWDYVL 330 (354)
Q Consensus 262 --------~~---~~~~~L~~~~~~L~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~t~~e~~~ll 330 (354)
++ ....++ ++.+.++| +++++|.+..-... . ...+.+.+.+.|
T Consensus 87 ag~~~g~~d~r~~L~~~~~-r~i~~~~P---~~~~~ENV~gl~~~--------------------~--~~~~~~~i~~~l 140 (327)
T 2c7p_A 87 SGKQKGFEDSRGTLFFDIA-RIVREKKP---KVVFMENVKNFASH--------------------D--NGNTLEVVKNTM 140 (327)
T ss_dssp TSCCCGGGSTTSCHHHHHH-HHHHHHCC---SEEEEEEEGGGGTG--------------------G--GGHHHHHHHHHH
T ss_pred hcccCCCcchhhHHHHHHH-HHHHhccC---cEEEEeCcHHHHhc--------------------c--ccHHHHHHHHHH
Confidence 11 112223 34445688 68888876431110 1 122467788889
Q ss_pred HHcCCceeE
Q 018565 331 RQAGFSRYN 339 (354)
Q Consensus 331 ~~aGf~~~~ 339 (354)
++.||.+..
T Consensus 141 ~~~GY~v~~ 149 (327)
T 2c7p_A 141 NELDYSFHA 149 (327)
T ss_dssp HHTTBCCEE
T ss_pred HhCCCEEEE
Confidence 999987654
No 461
>2p8t_A Hypothetical protein PH0730; pyrococcus horikoshii OT3, STR genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.72 d.74.4.2
Probab=91.18 E-value=0.15 Score=42.10 Aligned_cols=49 Identities=14% Similarity=0.260 Sum_probs=43.0
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhh
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLM 104 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~ 104 (354)
+|++..+||+.+|+++..++..++-|...|+++... +...+|+.|+.+.
T Consensus 29 ~~V~~~~LA~~LgvS~~SV~~~lkkL~e~GLV~~~~-----~Gv~LTe~G~~~A 77 (200)
T 2p8t_A 29 EPLGRKQISERLELGEGSVRTLLRKLSHLDIIRSKQ-----RGHFLTLKGKEIR 77 (200)
T ss_dssp SCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC-------CEEECHHHHHHH
T ss_pred CCccHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEeC-----CCeEECHHHHHHH
Confidence 589999999999999999999999999999999887 6788999886444
No 462
>2g9w_A Conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor, DNA B protein; 1.80A {Mycobacterium tuberculosis} SCOP: a.4.5.39
Probab=90.54 E-value=0.15 Score=39.46 Aligned_cols=49 Identities=12% Similarity=0.228 Sum_probs=40.8
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcC----CCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALK----CDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g----~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|+..|....+++|+.+|++.++ +++..+.++|+-|...|+|.+..
T Consensus 10 ~e~~vL~~L~~~~~~~t~~el~~~l~~~~~~~~~Tvt~~l~rLe~kGlv~r~~ 62 (138)
T 2g9w_A 10 LERAVMDHLWSRTEPQTVRQVHEALSARRDLAYTTVMAVLQRLAKKNLVLQIR 62 (138)
T ss_dssp HHHHHHHHHHTCSSCEEHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHhccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 35556666654226999999999998 78999999999999999999876
No 463
>3elk_A Putative transcriptional regulator TA0346; structural genomics, PSI-2, prote structure initiative; 1.70A {Thermoplasma acidophilum}
Probab=90.52 E-value=0.24 Score=37.19 Aligned_cols=73 Identities=12% Similarity=0.180 Sum_probs=54.7
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcC------CCcccHHHHHHHHhccCceeeccC--CCCC--ceEecCccc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALK------CDPSLLQRIMRFLIHLKFFKEVPT--SQGS--MAFQQTPLS 100 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g------~~~~~l~~lL~~L~~~g~l~~~~~--~~~~--~~y~~t~~~ 100 (354)
..+++-.+++-|+..|.. +|.+.-+|++.+. +++..+...|+-|...|+++.... .++. ..|++|+.|
T Consensus 8 ~~l~~g~l~~~IL~lL~~--~p~~gyel~~~l~~~~~~~i~~gtly~~L~~Le~~GlI~~~~~~~~~~~~rk~Y~lT~~G 85 (117)
T 3elk_A 8 ERILHGLITLYILKELVK--RPMHGYELQKSMFETTGQALPQGSIYILLKTMKERGFVISESSVNEKGQQLTVYHITDAG 85 (117)
T ss_dssp CHHHHHHHHHHHHHHHHH--SCEEHHHHHHHHHHHHSCCCCTTHHHHHHHHHHHHTSEEEEEEEC-CCCEEEEEEECHHH
T ss_pred HHHHhhHHHHHHHHHHHc--CCCCHHHHHHHHHHHhCCCCCcchHHHHHHHHHHCCCEEEEeeecCCCCCceEEEECHHH
Confidence 345556667777788876 7999999998886 899999999999999999986641 1111 249999998
Q ss_pred c-hhhc
Q 018565 101 R-RLMR 105 (354)
Q Consensus 101 ~-~l~~ 105 (354)
+ .|..
T Consensus 86 ~~~l~~ 91 (117)
T 3elk_A 86 KKFLCD 91 (117)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 6 4443
No 464
>2qq9_A Diphtheria toxin repressor; regulator, DTXR, helix-turn-helix, metal ION, ACT DNA-binding, ferrous iron, transcription; 1.71A {Corynebacterium diphtheriae} PDB: 2tdx_A 1ddn_A 1g3t_A 1g3s_A 1g3w_A 2qqa_A 2qqb_A 2dtr_A 1bi0_A 1bi2_A 1bi3_A 1dpr_A 1bi1_A 1fwz_A 1g3y_A 1c0w_A* 3glx_A 1p92_A 1xcv_A 1f5t_A ...
Probab=90.51 E-value=0.18 Score=42.58 Aligned_cols=50 Identities=14% Similarity=0.105 Sum_probs=43.3
Q ss_pred CCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhhc
Q 018565 52 PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLMR 105 (354)
Q Consensus 52 ~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~ 105 (354)
+.+..+||+.+++++..+.+.|+-|...|++++.. ...+.+|+.|+.+..
T Consensus 24 ~~~~~~la~~l~vs~~tvs~~l~~Le~~GlV~r~~----~~~v~LT~~G~~~~~ 73 (226)
T 2qq9_A 24 TPLRARIAERLEQSGPTVSQTVARMERDGLVVVAS----DRSLQMTPTGRTLAT 73 (226)
T ss_dssp CCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECT----TSBEEECHHHHHHHH
T ss_pred CccHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeC----CCCeEECHHHHHHHH
Confidence 44669999999999999999999999999999987 367999999865443
No 465
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=90.48 E-value=0.19 Score=34.42 Aligned_cols=36 Identities=14% Similarity=0.164 Sum_probs=34.3
Q ss_pred CCCCHHHHHhHcCC-CcccHHHHHHHHhccCceeecc
Q 018565 51 SPITLNELASALKC-DPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 51 ~~~t~~elA~~~g~-~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
+.+++.++|+.+++ ..+++..++.+|.++|++++..
T Consensus 29 ~~i~l~~aa~~L~v~~kRRiYDI~NVLe~igli~K~~ 65 (76)
T 1cf7_A 29 GVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKS 65 (76)
T ss_dssp TEEEHHHHHHHTTTCCTHHHHHHHHHHHHHTSEEEEE
T ss_pred CcCcHHHHHHHhCCccceehhhHHHHHhHhcceeecC
Confidence 67899999999999 9999999999999999999986
No 466
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=90.24 E-value=1.6 Score=34.21 Aligned_cols=55 Identities=13% Similarity=0.099 Sum_probs=38.7
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCeEEEeechHHhhhcccCCCeEEeecCCCC
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIRGINFDLPHVVCVAEKCHGVEHVGGDMFD 243 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~ 243 (354)
-..-|+|+|=|+|..=-.+.+.+|+-++.++|..-.+.-....+.=.++.||+.+
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~ 94 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRE 94 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHH
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHH
Confidence 3467999999999999999999999999999962111000002334466677765
No 467
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=90.23 E-value=0.054 Score=49.14 Aligned_cols=62 Identities=13% Similarity=0.142 Sum_probs=0.0
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcccchhhc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLSRRLMR 105 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~~~l~~ 105 (354)
-+..++..|... +++|..|||+.+|+++.-++|.|+.|...|+++... ....+|+.|+.+..
T Consensus 21 r~~~iL~~l~~~-~~~t~~eLa~~l~vs~~Tv~r~l~~Le~~Glv~~~~-----~gi~LT~~G~~~~~ 82 (345)
T 2o0m_A 21 ERFQILRNIYWM-QPIGRRSLSETMGITERVLRTETDVLKQLNLIEPSK-----SGMTLTERGLEVYQ 82 (345)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe-----cceEEcHHHHHHHH
Confidence 345677777654 799999999999999999999999999999998554 34789988875554
No 468
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=90.14 E-value=0.21 Score=37.65 Aligned_cols=55 Identities=9% Similarity=0.107 Sum_probs=44.0
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTP 98 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~ 98 (354)
..-.|.+.+.. .|.++.+||+.+|+++..+..+|+.|...|.+..-. ++.|.++.
T Consensus 8 l~~~i~~~~~~--~p~~~~~la~~~~~~~~~~~~~l~~l~~~G~l~~i~----~~~~~~~~ 62 (121)
T 2pjp_A 8 IWQKAEPLFGD--EPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIV----KDRYYRND 62 (121)
T ss_dssp HHHHHGGGCSS--SCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEE----TTEEEEHH
T ss_pred HHHHHHHHHHh--CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEec----CCceECHH
Confidence 33455666643 577999999999999999999999999999888887 36775554
No 469
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=90.02 E-value=0.43 Score=35.69 Aligned_cols=69 Identities=12% Similarity=0.081 Sum_probs=51.4
Q ss_pred HHHHHHHHcChhhhhhhCCCCCCHHHHHhHc------CCCcccHHHHHHHHhccCceeeccCC--CCC--ceEecCcccc
Q 018565 32 AVVKCAVELGIAEAVEEKGSPITLNELASAL------KCDPSLLQRIMRFLIHLKFFKEVPTS--QGS--MAFQQTPLSR 101 (354)
Q Consensus 32 ~~l~~a~~lglf~~L~~~~~~~t~~elA~~~------g~~~~~l~~lL~~L~~~g~l~~~~~~--~~~--~~y~~t~~~~ 101 (354)
.+++-.+++-|+..|.. +|.+.-+|++.+ ++++..+...|+-|...|+++..... +|. ..|++|+.|+
T Consensus 8 ~l~~g~l~~~IL~lL~~--~p~~Gyei~~~l~~~g~~~is~gtlY~~L~rLe~~GlI~~~~~~~~~g~~rk~Y~lT~~G~ 85 (116)
T 3hhh_A 8 ELLKGILEGLVLAIIQR--KETYGYEITKILNDQGFTEIVEGTVYTILLRLEKNQWVIAEKKPSEKGPMRKFYRLTSSGE 85 (116)
T ss_dssp HHHTTHHHHHHHHHHHH--SCBCHHHHHHHHHTTSCSSCCHHHHHHHHHHHHHTTSEEEEEEECC--CEEEEEEECHHHH
T ss_pred HHHhhhHHHHHHHHHhc--CCCCHHHHHHHHHHcCCCCCCccHHHHHHHHHHHCCCEEEEeeecCCCCCceEEEECHHHH
Confidence 44445556666777776 799999999998 68999999999999999999876310 111 1399999886
Q ss_pred h
Q 018565 102 R 102 (354)
Q Consensus 102 ~ 102 (354)
.
T Consensus 86 ~ 86 (116)
T 3hhh_A 86 A 86 (116)
T ss_dssp H
T ss_pred H
Confidence 3
No 470
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=89.74 E-value=0.18 Score=39.45 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=46.0
Q ss_pred HHHcChhhhhhhCCCCCCHHHHHhHc-----CCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 37 AVELGIAEAVEEKGSPITLNELASAL-----KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 37 a~~lglf~~L~~~~~~~t~~elA~~~-----g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
..+.-|++.|...+ +.|++||.+.+ +++..-+.|.|+.|+..|++.+....++..+|.+.
T Consensus 19 ~qR~~Il~~l~~~~-h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~i~~~~~~~~Y~~~ 83 (145)
T 3eyy_A 19 PQRQLVLEAVDTLE-HATPDDILGEVRKTASGINISTVYRTLELLEELGLVSHAHLGHGAPTYHLA 83 (145)
T ss_dssp HHHHHHHHHHHHHS-SBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEEEECGGGCEEEEET
T ss_pred HHHHHHHHHHHhcC-CCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHHCCcEEEEEeCCCceEEEeC
Confidence 35566778787654 89999998887 67889999999999999999887643233457643
No 471
>1xma_A Predicted transcriptional regulator; southea collaboratory for structural genomics, secsg, protein struc initiative, PSI; 2.30A {Clostridium thermocellum} SCOP: a.4.5.61
Probab=89.59 E-value=0.15 Score=39.90 Aligned_cols=68 Identities=16% Similarity=0.122 Sum_probs=50.3
Q ss_pred HHHHHHcChhhhhhhCCCCCCHHHHHhHc--------CCCcccHHHHHHHHhccCceeeccCC--CC--CceEecCcccc
Q 018565 34 VKCAVELGIAEAVEEKGSPITLNELASAL--------KCDPSLLQRIMRFLIHLKFFKEVPTS--QG--SMAFQQTPLSR 101 (354)
Q Consensus 34 l~~a~~lglf~~L~~~~~~~t~~elA~~~--------g~~~~~l~~lL~~L~~~g~l~~~~~~--~~--~~~y~~t~~~~ 101 (354)
+....++-|+..|.. +|.+.-+|++.+ ++++..+.+.|+-|...|+|+..... ++ --.|++|+.++
T Consensus 38 ~~g~~~~~IL~~L~~--~~~~gyeI~~~l~~~~~~~~~is~gtLy~~L~rLE~~GlI~~~~~~~~~~~~rk~Y~LT~~G~ 115 (145)
T 1xma_A 38 IRGYVDTIILSLLIE--GDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGEETQGKRRTYYRITPEGI 115 (145)
T ss_dssp GGGTHHHHHHHHHHH--CCEEHHHHHHHHHHHHTTSCCCCHHHHHHHHHHHHHTTSEEEEEEEEC--CEEEEEEECHHHH
T ss_pred hcCcHHHHHHHHHHh--CCCCHHHHHHHHHHhhCCccCcChhHHHHHHHHHHHCCCEEEEEeccCCCCCeEEEEECHHHH
Confidence 344456667777765 789999988887 69999999999999999999776321 01 12489999886
Q ss_pred hh
Q 018565 102 RL 103 (354)
Q Consensus 102 ~l 103 (354)
.+
T Consensus 116 ~~ 117 (145)
T 1xma_A 116 KY 117 (145)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 472
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=89.39 E-value=0.2 Score=38.66 Aligned_cols=35 Identities=17% Similarity=0.101 Sum_probs=33.0
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeec
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEV 85 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~ 85 (354)
...|.++||+++|+++.-+.+.|+-|...|+++..
T Consensus 50 ~~ps~~~LA~~~~~s~~~v~~~L~~L~~KGlI~i~ 84 (135)
T 2v79_A 50 YFPTPNQLQEGMSISVEECTNRLRMFIQKGFLFIE 84 (135)
T ss_dssp CSCCHHHHHTTSSSCHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEE
Confidence 46799999999999999999999999999999884
No 473
>1sd4_A Penicillinase repressor; BLAI, MECI, methicillin, B-lactam, DNA binding PR; 2.00A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1xsd_A
Probab=89.31 E-value=0.14 Score=38.59 Aligned_cols=48 Identities=13% Similarity=0.275 Sum_probs=40.2
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHcC----CCcccHHHHHHHHhccCceeecc
Q 018565 38 VELGIAEAVEEKGSPITLNELASALK----CDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~g----~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+..|+..|-.. +|.|..+||+.++ +++..+.++|+-|...|+|.+..
T Consensus 11 ~q~~vL~~L~~~-~~~t~~el~~~l~~~~~~~~~Tvt~~l~rLe~kGlv~R~~ 62 (126)
T 1sd4_A 11 AEWDVMNIIWDK-KSVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYK 62 (126)
T ss_dssp HHHHHHHHHHHS-SSEEHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHhc-CCCCHHHHHHHHhhcCCCChhhHHHHHHHHHHCCceEEEe
Confidence 345566666654 6999999999997 57999999999999999999876
No 474
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=89.08 E-value=0.3 Score=43.67 Aligned_cols=57 Identities=9% Similarity=0.049 Sum_probs=45.5
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
+..|++.|.+ ++++|.++||+.+|+++..++|-|+.|...|++.+..+ ...|++.+.
T Consensus 7 ~~~Il~~L~~-~~~~s~~eLa~~l~vS~~ti~r~l~~L~~~G~~i~~~~---g~GY~l~~~ 63 (321)
T 1bia_A 7 PLKLIALLAN-GEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVP---GKGYSLPEP 63 (321)
T ss_dssp HHHHHHHHTT-SSCBCHHHHHHHHTSCHHHHHHHHHHHHHTTCCCEEET---TTEEECSSC
T ss_pred HHHHHHHHHc-CCCcCHHHHHHHHCCCHHHHHHHHHHHHhCCCcEEEec---CCCcEEeec
Confidence 3456777765 36899999999999999999999999999999865442 246888653
No 475
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=88.86 E-value=0.22 Score=36.31 Aligned_cols=47 Identities=13% Similarity=0.125 Sum_probs=37.8
Q ss_pred HcChhhhhhhCCCCC-CHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 39 ELGIAEAVEEKGSPI-TLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 39 ~lglf~~L~~~~~~~-t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
+..|+..|.. ++.+ |..+||+.+|++..-+++-|+.|...|+++...
T Consensus 30 ~~~I~~~l~~-g~~lps~~eLa~~lgVSr~tVr~al~~L~~~GlI~~~~ 77 (102)
T 2b0l_A 30 IEHIFEELDG-NEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRS 77 (102)
T ss_dssp HHHHTTSSBT-TEEEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHhhhcC-CCcCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 3344444544 2455 999999999999999999999999999998775
No 476
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=88.66 E-value=0.27 Score=42.23 Aligned_cols=65 Identities=11% Similarity=0.154 Sum_probs=49.2
Q ss_pred cChhhhhhhCC-CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc--eEecCcccchhh
Q 018565 40 LGIAEAVEEKG-SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM--AFQQTPLSRRLM 104 (354)
Q Consensus 40 lglf~~L~~~~-~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~--~y~~t~~~~~l~ 104 (354)
..|+..|-+.+ +++|..+||+.+++++..+.++|+-|...|++.+.....+.. ...+|+.|+.+.
T Consensus 37 ~~vL~~L~~~~~~~~~~~el~~~l~~~~~t~t~~l~rLe~~G~i~R~~~~~DrR~~~i~LT~~G~~~~ 104 (250)
T 1p4x_A 37 FILLTYLFHQQENTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKI 104 (250)
T ss_dssp HHHHHHHHSCSCSEEEHHHHHHHSSSCGGGTHHHHHHHHHTTSCEEEECSSSTTSEEEECCHHHHHHH
T ss_pred HHHHHHHHhcCCCCcCHHHHHHHHCCCHhhHHHHHHHHHHCCCEEecCCCCCCCeEEEEECHHHHHHH
Confidence 55666665421 589999999999999999999999999999998875321222 367888876544
No 477
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=88.63 E-value=1.5 Score=40.11 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=28.3
Q ss_pred CCCceEEEecCCccHHHHHHHHHC-------CCCeEEEeechH
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAF-------PRIRGINFDLPH 223 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~-------p~~~~~~~D~~~ 223 (354)
+..-+|+|+|+|+|.++..+++.. ..++++.++...
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp 121 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINP 121 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCH
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCH
Confidence 445689999999999999888642 345889999833
No 478
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=88.49 E-value=1.3 Score=39.61 Aligned_cols=122 Identities=12% Similarity=0.083 Sum_probs=77.8
Q ss_pred CCceEEEecCCccHHHHHHHHHCCCCe-E-EEeec-hHHhhhccc--CCCeEEeecCCCC-C---CC--cceEEEecccc
Q 018565 189 GIETLVDIGGNDGTTLRTLTKAFPRIR-G-INFDL-PHVVCVAEK--CHGVEHVGGDMFD-G---VP--EADAAIIKWVL 257 (354)
Q Consensus 189 ~~~~vLDvG~G~G~~~~~l~~~~p~~~-~-~~~D~-~~~~~~a~~--~~~v~~~~~d~~~-~---~~--~~D~i~~~~~l 257 (354)
...+++|+-||.|.+...+.+..-..+ + .++|+ +..++..+. ... +..+|+.+ . ++ ++|+++.....
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~--~~~~DI~~~~~~~i~~~~~Dil~ggpPC 86 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE--VQVKNLDSISIKQIESLNCNTWFMSPPC 86 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC--CBCCCTTTCCHHHHHHTCCCEEEECCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC--cccCChhhcCHHHhccCCCCEEEecCCc
Confidence 457999999999999999988742234 4 58888 666655543 222 56678876 2 23 48999987776
Q ss_pred ccC--C--------hHHHHHHHHHHHH----hc--CCCCceEEEEeeeeCCCCCCCcchhhhhhhccHHhhcccCCcccC
Q 018565 258 HDW--G--------DDECIKILKNCKE----AI--TKDKGKVIIVEAIIEEDDGVDNKFKSVRLMLDMVMMAHTNKGKER 321 (354)
Q Consensus 258 h~~--~--------~~~~~~~L~~~~~----~L--~p~gG~lli~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~ 321 (354)
..| + ++....++..+.+ .+ +| +++++|.+..-. .+ .
T Consensus 87 Q~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P---~~~~lENV~gl~-----------------------~~--~ 138 (327)
T 3qv2_A 87 QPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKP---KHIFIENVPLFK-----------------------ES--L 138 (327)
T ss_dssp TTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCC---SEEEEEECGGGG-----------------------GS--H
T ss_pred cCcccccCCCCCCCccccchhHHHHHHHHHHHhccCC---CEEEEEchhhhc-----------------------Ch--H
Confidence 666 1 1122234555544 44 55 788888653210 01 1
Q ss_pred CHHHHHHHHHHcCCceeEE
Q 018565 322 SLKEWDYVLRQAGFSRYNI 340 (354)
Q Consensus 322 t~~e~~~ll~~aGf~~~~~ 340 (354)
+.+.+.+.|++.||.+...
T Consensus 139 ~~~~i~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 139 VFKEIYNILIKNQYYIKDI 157 (327)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEE
Confidence 3677888899999987643
No 479
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=88.42 E-value=0.41 Score=41.26 Aligned_cols=40 Identities=23% Similarity=0.113 Sum_probs=33.5
Q ss_pred CCCceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhcc
Q 018565 188 DGIETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAE 229 (354)
Q Consensus 188 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~ 229 (354)
.++..|||..||+|..+....+. +.+++++|+ +..++.++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHH
Confidence 35679999999999999998876 568999999 77777665
No 480
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=88.29 E-value=0.42 Score=38.07 Aligned_cols=61 Identities=7% Similarity=0.098 Sum_probs=45.3
Q ss_pred HHHcChhhhhhhCCCCCCHHHHHhHc-------CCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 37 AVELGIAEAVEEKGSPITLNELASAL-------KCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 37 a~~lglf~~L~~~~~~~t~~elA~~~-------g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
.-+.-|++.|.+.+++.|++||-+.+ +++..-+.|.|+.|+..|++.+....++..+|...
T Consensus 33 ~qR~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~is~aTVYRtL~~L~e~Glv~~i~~~~~~~~Y~~~ 100 (162)
T 4ets_A 33 KQREVLLKTLYHSDTHYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELA 100 (162)
T ss_dssp HHHHHHHHHHHSCCSCBCHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTSEEECC-----CCEEEC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCceEEEeC
Confidence 36677888887655799999998765 46788999999999999999988532223457654
No 481
>2p5k_A Arginine repressor; DNA-binding domain, winged helix-turn-helix (WHTH), DNA binding protein; 1.00A {Bacillus subtilis} SCOP: a.4.5.3 PDB: 2p5l_C*
Probab=88.25 E-value=0.43 Score=31.02 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=28.7
Q ss_pred hhhhhCCCCCCHHHHHhHc-----CCCcccHHHHHHHHhccCce
Q 018565 44 EAVEEKGSPITLNELASAL-----KCDPSLLQRIMRFLIHLKFF 82 (354)
Q Consensus 44 ~~L~~~~~~~t~~elA~~~-----g~~~~~l~~lL~~L~~~g~l 82 (354)
..+... ++.|++||++.+ +++..-+.|-|+ .+|++
T Consensus 12 ~ll~~~-~~~t~~el~~~l~~~~~~vs~~Tv~R~L~---~lg~v 51 (64)
T 2p5k_A 12 EIITSN-EIETQDELVDMLKQDGYKVTQATVSRDIK---ELHLV 51 (64)
T ss_dssp HHHHHS-CCCSHHHHHHHHHHTTCCCCHHHHHHHHH---HHTCE
T ss_pred HHHHcC-CCCCHHHHHHHHHHhCCCcCHHHHHHHHH---HcCCE
Confidence 334432 799999999999 999999999999 56777
No 482
>2qlz_A Transcription factor PF0095; 2.50A {Pyrococcus furiosus} PDB: 2quf_A
Probab=88.13 E-value=0.51 Score=40.01 Aligned_cols=53 Identities=9% Similarity=0.018 Sum_probs=44.8
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCc
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTP 98 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~ 98 (354)
.-|.-.|.. ++.|+++||+.+|+++.-+...|.-|...|+++... +++..+.+
T Consensus 168 ~~l~~~l~~--~~~t~~~la~~~~l~~~~V~~~l~~L~~~~~v~~~~----~~~~~~~~ 220 (232)
T 2qlz_A 168 AILHYLLLN--GRATVEELSDRLNLKEREVREKISEMARFVPVKIIN----DNTVVLDE 220 (232)
T ss_dssp HHHHHHHHS--SEEEHHHHHHHHTCCHHHHHHHHHHHTTTSCEEEET----TTEEEECH
T ss_pred HHHHHHHhc--CCCCHHHHHHHhCcCHHHHHHHHHHHHhcCCeEEec----CCeEEecH
Confidence 556666666 899999999999999999999999999999998776 47776553
No 483
>1yg2_A Gene activator APHA; virulence factor, winged helix, transcripti factor, transcription; 2.20A {Vibrio cholerae} SCOP: a.4.5.61
Probab=88.12 E-value=0.38 Score=38.99 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=48.3
Q ss_pred HHcChhhhhhhCCCCCCHHHHHhHc--------CCCcccHHHHHHHHhccCceeeccCC-CC---CceEecCcccc
Q 018565 38 VELGIAEAVEEKGSPITLNELASAL--------KCDPSLLQRIMRFLIHLKFFKEVPTS-QG---SMAFQQTPLSR 101 (354)
Q Consensus 38 ~~lglf~~L~~~~~~~t~~elA~~~--------g~~~~~l~~lL~~L~~~g~l~~~~~~-~~---~~~y~~t~~~~ 101 (354)
+++-|+..|.. +|.+.-+|++.+ ++++..+.+.|+-|...|+++..... ++ --.|++|+.|+
T Consensus 3 l~~~iL~lL~~--~~~~gyel~~~l~~~~~~~~~~s~~~ly~~L~~Le~~GlI~~~~~~~~~~~~r~~Y~lT~~G~ 76 (179)
T 1yg2_A 3 LPHVILTVLST--RDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQEGKPDRKVYSITQAGR 76 (179)
T ss_dssp HHHHHHHHHHH--CCBCHHHHHHHHTTGGGGTCCCCHHHHHHHHHHHHHTTSEEECCC---------CEEECHHHH
T ss_pred hHHHHHHHHhc--CCCCHHHHHHHHHHHhCCccCCCcCcHHHHHHHHHHCCCeEEEeecCCCCCCceEEEeChHHH
Confidence 35557777776 799999999998 68999999999999999999876421 11 12499999985
No 484
>3rkx_A Biotin-[acetyl-COA-carboxylase] ligase; biotin protein ligase, 3 domains, enzyme DNA binding, biotin coupling domains; 2.10A {Staphylococcus aureus} PDB: 3rir_A* 3rkw_A 3rky_A* 3v7c_A* 3v7s_A* 3v8j_A 3v7r_A 3v8k_A* 3v8l_A* 4dq2_A*
Probab=88.05 E-value=0.34 Score=43.32 Aligned_cols=59 Identities=8% Similarity=0.055 Sum_probs=45.8
Q ss_pred HcChhhhhhhC-CCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCccc
Q 018565 39 ELGIAEAVEEK-GSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPLS 100 (354)
Q Consensus 39 ~lglf~~L~~~-~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~~ 100 (354)
+..|++.|.+. +.++|.++||+.+|++...+.+.++.|...|+..+..+ ...|++.+..
T Consensus 5 ~~~iL~~L~~~~g~~~Sg~eLa~~lgvSr~aV~k~i~~L~~~G~~i~~~~---~~GY~L~~~~ 64 (323)
T 3rkx_A 5 SQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVN---HKGHLLQQLP 64 (323)
T ss_dssp HHHHHHHHHHHTTSCBCHHHHHHHHTSCHHHHHHHHHHHHHTTCEEEEET---TTEEEEEECC
T ss_pred HHHHHHHHHhCCCCccCHHHHHHHHCCCHHHHHHHHHHHHhcCCeEEEeC---CCeEEEecCc
Confidence 34577777432 25899999999999999999999999999999655432 2679887643
No 485
>3l7w_A Putative uncharacterized protein SMU.1704; PADR, transcriptional factor, transcription; HET: MSE; 2.20A {Streptococcus mutans} SCOP: a.4.5.0
Probab=88.00 E-value=0.3 Score=35.96 Aligned_cols=66 Identities=15% Similarity=0.146 Sum_probs=47.9
Q ss_pred HHHHHcChhhhhhhCCCCCCHHHHHhH----cCCCcccHHHHHHHHhccCceeeccCC-CCC--ceEecCcccch
Q 018565 35 KCAVELGIAEAVEEKGSPITLNELASA----LKCDPSLLQRIMRFLIHLKFFKEVPTS-QGS--MAFQQTPLSRR 102 (354)
Q Consensus 35 ~~a~~lglf~~L~~~~~~~t~~elA~~----~g~~~~~l~~lL~~L~~~g~l~~~~~~-~~~--~~y~~t~~~~~ 102 (354)
+-.+++-|+..|.. +|.+.-+|++. +++++..+.+.|+-|...|+++..... ++. ..|++|+.|+.
T Consensus 7 ~g~l~~~IL~~L~~--~~~~gyel~~~l~~~~~i~~~tly~~L~~Le~~GlI~~~~~~~~~r~r~~y~LT~~G~~ 79 (108)
T 3l7w_A 7 ALLIEYLILAIVSK--HDSYGYDISQTIKLIASIKESTLYPILKKLEKAGYLSTYTQEHQGRRRKYYHLTDSGEK 79 (108)
T ss_dssp HHHHHHHHHHHHHH--SCEEHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEECHHHHH
T ss_pred HHHHHHHHHHHHHc--CCCcHHHHHHHHHHHhCCCcChHHHHHHHHHHCCCeEEEeecCCCCcceEEEECHHHHH
Confidence 34455666777766 68887777666 589999999999999999999876421 111 13889998863
No 486
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=87.86 E-value=0.77 Score=40.00 Aligned_cols=96 Identities=14% Similarity=0.034 Sum_probs=66.6
Q ss_pred CceEEEecCCccHHHHHHHHHCCCCeEEEeec-hHHhhhccc----CCCeEEeecCCCC--C--CC---cceEEEecccc
Q 018565 190 IETLVDIGGNDGTTLRTLTKAFPRIRGINFDL-PHVVCVAEK----CHGVEHVGGDMFD--G--VP---EADAAIIKWVL 257 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~~~v~~~~~d~~~--~--~~---~~D~i~~~~~l 257 (354)
...+||+=+|||.++.++++. .-+++.+|. ++.+...++ ..++++...|.+. . .| .||+|++--..
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 456899999999999999983 468999999 777766654 4689999999765 1 12 49999996544
Q ss_pred ccCChHHHHHHHHHHHHh--cCCCCceEEEEeeee
Q 018565 258 HDWGDDECIKILKNCKEA--ITKDKGKVIIVEAII 290 (354)
Q Consensus 258 h~~~~~~~~~~L~~~~~~--L~p~gG~lli~e~~~ 290 (354)
.. .+...++++.+.+. +.| +|.++|-=++.
T Consensus 170 e~--k~~~~~vl~~L~~~~~r~~-~Gi~v~WYPi~ 201 (283)
T 2oo3_A 170 ER--KEEYKEIPYAIKNAYSKFS-TGLYCVWYPVV 201 (283)
T ss_dssp CS--TTHHHHHHHHHHHHHHHCT-TSEEEEEEEES
T ss_pred CC--CcHHHHHHHHHHHhCccCC-CeEEEEEEecc
Confidence 32 22445556555553 346 78777754443
No 487
>1hsj_A Fusion protein consisting of staphylococcus accessary regulator protein R and maltose...; novel fold for DNA binding; HET: GLC; 2.30A {Escherichia coli} SCOP: a.4.5.28 c.94.1.1
Probab=87.80 E-value=0.25 Score=46.77 Aligned_cols=67 Identities=18% Similarity=0.207 Sum_probs=50.1
Q ss_pred HHcChhhhhhhC-CCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCc--eEecCcccchhh
Q 018565 38 VELGIAEAVEEK-GSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSM--AFQQTPLSRRLM 104 (354)
Q Consensus 38 ~~lglf~~L~~~-~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~--~y~~t~~~~~l~ 104 (354)
-+..|+..|.+. ++++|..+||+++++++..+.|+|+-|...|+|++.....+.+ ...+|+.++.+.
T Consensus 405 ~q~~vl~~l~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~le~~g~v~r~~~~~D~R~~~i~lT~~g~~~~ 474 (487)
T 1hsj_A 405 EEIYILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANI 474 (487)
T ss_dssp HHHHHHHHHHTCSCSEEEHHHHHHSSCCCHHHHHHHHHHHHTTTTSCCEECCSSSSCCEEECCSSHHHHH
T ss_pred HHHHHHHHHHhCCCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeecCCCCCCCeEEEEECHHHHHHH
Confidence 345677777652 1589999999999999999999999999999998865221111 377787776443
No 488
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=87.42 E-value=0.32 Score=44.33 Aligned_cols=53 Identities=13% Similarity=0.152 Sum_probs=46.1
Q ss_pred HcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecC
Q 018565 39 ELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQT 97 (354)
Q Consensus 39 ~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t 97 (354)
+..|++.|.. +|.++++|++++|++...+...|-.|.-.|+++... ++.|+++
T Consensus 330 ~~~vl~~l~~--~~~~~D~l~~~~gl~~~~v~~~L~~LEl~G~v~~~~----Gg~~~~~ 382 (382)
T 3maj_A 330 RTRILALLGP--SPVGIDDLIRLSGISPAVVRTILLELELAGRLERHG----GSLVSLS 382 (382)
T ss_dssp HHHHHHHCCS--SCEEHHHHHHHHCCCHHHHHHHHHHHHHTTCCEECT----TSEEEC-
T ss_pred HHHHHHhhCC--CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCcEEeCC----CceEecC
Confidence 4468888875 799999999999999999999999999999999887 4778764
No 489
>1jhg_A Trp operon repressor; complex (regulatory protein-peptide), DNA-binding regulatory complex (regulatory protein-peptide) complex; HET: TRP; 1.30A {Escherichia coli} SCOP: a.4.12.1 PDB: 1co0_A* 1mi7_R 1p6z_R 1wrp_R* 1zt9_A* 2oz9_R* 3ssw_R 3wrp_A 1rcs_A* 1wrs_R* 1wrt_R 2xdi_A 3ssx_R* 1trr_A* 1tro_A*
Probab=87.31 E-value=0.48 Score=34.35 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=35.0
Q ss_pred HHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhc
Q 018565 36 CAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIH 78 (354)
Q Consensus 36 ~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~ 78 (354)
.+.++||+..|.. ++.|-.|||+.+|++...+.|+=++|-.
T Consensus 44 l~~R~~l~~~L~~--ge~TQREIA~~lGiS~stISRi~r~L~~ 84 (101)
T 1jhg_A 44 LGTRVRIIEELLR--GEMSQRELKNELGAGIATITRGSNSLKA 84 (101)
T ss_dssp HHHHHHHHHHHHH--CCSCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCcCHHHHHHHHCCChhhhhHHHHHHHH
Confidence 3567999999986 7899999999999999999988776643
No 490
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=87.30 E-value=1.1 Score=38.46 Aligned_cols=91 Identities=22% Similarity=0.240 Sum_probs=61.8
Q ss_pred CceEEEecCCccHHHHHHHHH-------CCCCeEEEeec----hHH------------------------hhh-------
Q 018565 190 IETLVDIGGNDGTTLRTLTKA-------FPRIRGINFDL----PHV------------------------VCV------- 227 (354)
Q Consensus 190 ~~~vLDvG~G~G~~~~~l~~~-------~p~~~~~~~D~----~~~------------------------~~~------- 227 (354)
+..|+|+|+-.|..+..+++. .++-++.++|. |+. +..
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 579999999999988876542 45678999983 221 000
Q ss_pred ccc----CCCeEEeecCCCC--C-----CC--cceEEEeccccccCChHHHHHHHHHHHHhcCCCCceEEE
Q 018565 228 AEK----CHGVEHVGGDMFD--G-----VP--EADAAIIKWVLHDWGDDECIKILKNCKEAITKDKGKVII 285 (354)
Q Consensus 228 a~~----~~~v~~~~~d~~~--~-----~~--~~D~i~~~~~lh~~~~~~~~~~L~~~~~~L~p~gG~lli 285 (354)
.+. .++|+++.|++.+ + .+ .+|++++-.=. -+.....+..+...|+| ||.+++
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----Y~~t~~~le~~~p~l~~-GGvIv~ 215 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----YEPTKAVLEAIRPYLTK-GSIVAF 215 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----HHHHHHHHHHHGGGEEE-EEEEEE
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----cchHHHHHHHHHHHhCC-CcEEEE
Confidence 001 3789999999976 2 12 37888775422 13456789999999999 766554
No 491
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=87.20 E-value=0.29 Score=44.83 Aligned_cols=54 Identities=20% Similarity=0.214 Sum_probs=43.2
Q ss_pred HHHHHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 31 MAVVKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 31 ~~~l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
.+.++..-+..|++.|. . +++|..|||+.+|+++.-+.++++-|...|++.+.+
T Consensus 14 ~~~~~~~~~~~il~~l~-~-~~~sr~~la~~~gls~~tv~~~v~~L~~~gli~~~~ 67 (380)
T 2hoe_A 14 PKSVRAENISRILKRIM-K-SPVSRVELAEELGLTKTTVGEIAKIFLEKGIVVEEK 67 (380)
T ss_dssp --------CCCSHHHHH-H-SCBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred chhHHHHHHHHHHHHHH-c-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeec
Confidence 45667777788999998 5 799999999999999999999999999999998865
No 492
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=86.69 E-value=0.59 Score=39.63 Aligned_cols=44 Identities=9% Similarity=0.120 Sum_probs=38.5
Q ss_pred CCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCcc
Q 018565 51 SPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTPL 99 (354)
Q Consensus 51 ~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~~ 99 (354)
-++|-++||+.+|+++..+.|.|+.|...|+++..+ +.+.....
T Consensus 176 ~~~t~~~iA~~lG~sr~tvsR~l~~L~~~g~I~~~~-----~~i~i~d~ 219 (250)
T 3e6c_C 176 MPLSQKSIGEITGVHHVTVSRVLASLKRENILDKKK-----NKIIVYNL 219 (250)
T ss_dssp CCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECS-----SEEEESCH
T ss_pred CCCCHHHHHHHhCCcHHHHHHHHHHHHHCCCeEeCC-----CEEEEecH
Confidence 378999999999999999999999999999999887 56655543
No 493
>2vxz_A Pyrsv_GP04; viral protein, SSPF, ORF165A; 1.7A {Pyrobaculum spherical virus}
Probab=86.67 E-value=0.41 Score=36.92 Aligned_cols=46 Identities=11% Similarity=0.002 Sum_probs=40.9
Q ss_pred cChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccC
Q 018565 40 LGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPT 87 (354)
Q Consensus 40 lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~ 87 (354)
-.+++.|.. ||.|+.+||+.+|++-....-.|..|...|++.+...
T Consensus 14 ~~ILE~Lk~--G~~~t~~Iak~LGlShg~aq~~Ly~LeREG~V~~Vk~ 59 (165)
T 2vxz_A 14 RDILALLAD--GCKTTSLIQQRLGLSHGRAKALIYVLEKEGRVTRVAF 59 (165)
T ss_dssp HHHHHHHTT--CCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred HHHHHHHHh--CCccHHHHHHHhCCcHHHHHHHHHHHHhcCceEEEEE
Confidence 346777774 8999999999999999999999999999999988763
No 494
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=86.31 E-value=0.59 Score=43.10 Aligned_cols=51 Identities=12% Similarity=0.273 Sum_probs=43.2
Q ss_pred HHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 35 KCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 35 ~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
+..-+..|++.|... +++|..|||+.+|+++.-+.++++-|...|++.+.+
T Consensus 14 r~~n~~~il~~l~~~-~~~sr~~la~~~~ls~~tv~~~v~~L~~~g~i~~~~ 64 (406)
T 1z6r_A 14 KQTNAGAVYRLIDQL-GPVSRIDLSRLAQLAPASITKIVHEMLEAHLVQELE 64 (406)
T ss_dssp HHHHHHHHHHHHHSS-CSCCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEC-
T ss_pred HHhHHHHHHHHHHHc-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEeec
Confidence 344445578888764 799999999999999999999999999999998864
No 495
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.84 E-value=4 Score=36.11 Aligned_cols=86 Identities=10% Similarity=0.103 Sum_probs=52.7
Q ss_pred CceEEEecCCc-c-HHHHHHHHHCCCCeEEEeec-hHHhhhcccCCCeEEeecCCCC-CCCcceEEEeccccccCChHHH
Q 018565 190 IETLVDIGGND-G-TTLRTLTKAFPRIRGINFDL-PHVVCVAEKCHGVEHVGGDMFD-GVPEADAAIIKWVLHDWGDDEC 265 (354)
Q Consensus 190 ~~~vLDvG~G~-G-~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~~~D~i~~~~~lh~~~~~~~ 265 (354)
..+|.=||+|. | .++..+.+.....+++++|. ++.++.+.+..-+.-...|..+ -..++|+|+++- |....
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilav-----p~~~~ 107 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS-----PVRTF 107 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECS-----CGGGH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeC-----CHHHH
Confidence 36899999773 3 33444554433238899998 6666665542222112233333 344689988754 44556
Q ss_pred HHHHHHHHHhcCCCCc
Q 018565 266 IKILKNCKEAITKDKG 281 (354)
Q Consensus 266 ~~~L~~~~~~L~p~gG 281 (354)
..+++++...++| +.
T Consensus 108 ~~vl~~l~~~l~~-~~ 122 (314)
T 3ggo_A 108 REIAKKLSYILSE-DA 122 (314)
T ss_dssp HHHHHHHHHHSCT-TC
T ss_pred HHHHHHHhhccCC-Cc
Confidence 7889999999998 54
No 496
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=85.50 E-value=0.95 Score=41.87 Aligned_cols=55 Identities=18% Similarity=0.162 Sum_probs=41.0
Q ss_pred cCCCceEEEecCCccHHHHHHH-HHCCC-CeEEEeec-hHHhhhccc---------C-CCeEEeecCC
Q 018565 187 FDGIETLVDIGGNDGTTLRTLT-KAFPR-IRGINFDL-PHVVCVAEK---------C-HGVEHVGGDM 241 (354)
Q Consensus 187 ~~~~~~vLDvG~G~G~~~~~l~-~~~p~-~~~~~~D~-~~~~~~a~~---------~-~~v~~~~~d~ 241 (354)
+.+...++|||++.|.++..++ +..+. .+++.++. |...+..++ . ++++++..-.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 3577899999999999999988 56665 78999998 766665443 2 5666665433
No 497
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=85.43 E-value=0.55 Score=38.34 Aligned_cols=35 Identities=17% Similarity=0.315 Sum_probs=33.4
Q ss_pred CCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 52 PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 52 ~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
++|-++||+.+|+++..+.|.|+.|...|+++..+
T Consensus 164 ~~t~~~lA~~lg~sr~tvsR~l~~l~~~g~I~~~~ 198 (207)
T 2oz6_A 164 KITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKG 198 (207)
T ss_dssp ECCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEET
T ss_pred ccCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEecC
Confidence 68999999999999999999999999999999876
No 498
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=84.83 E-value=0.67 Score=43.15 Aligned_cols=52 Identities=21% Similarity=0.336 Sum_probs=45.0
Q ss_pred HHHHHHcChhhhhhhCCCCCCHHHHHhHcCCCcccHHHHHHHHhccCceeecc
Q 018565 34 VKCAVELGIAEAVEEKGSPITLNELASALKCDPSLLQRIMRFLIHLKFFKEVP 86 (354)
Q Consensus 34 l~~a~~lglf~~L~~~~~~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~ 86 (354)
++..-+..|++.|... +++|..|||+.+|+++..+.++++-|...|++.+.+
T Consensus 36 ~r~~n~~~il~~l~~~-~~~sr~ela~~~gls~~tv~~~v~~L~~~gli~~~~ 87 (429)
T 1z05_A 36 IKQINAGRVYKLIDQK-GPISRIDLSKESELAPASITKITRELIDAHLIHETT 87 (429)
T ss_dssp HHHHHHHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHHHHHHHc-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecc
Confidence 4455556688888765 799999999999999999999999999999998865
No 499
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=84.82 E-value=0.78 Score=37.81 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=37.7
Q ss_pred CCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCc
Q 018565 52 PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTP 98 (354)
Q Consensus 52 ~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~ 98 (354)
++|-++||+.+|+++..+.|.|+.|...|+++..+ +++...+
T Consensus 169 ~~t~~~lA~~lg~sr~tvsR~l~~L~~~g~I~~~~-----~~i~i~d 210 (220)
T 3dv8_A 169 KITHETIANHLGSHREVITRMLRYFQVEGLVKLSR-----GKITILD 210 (220)
T ss_dssp CCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-----TEEEESC
T ss_pred cCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEeCC-----CEEEEeC
Confidence 88999999999999999999999999999999876 6665543
No 500
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=84.79 E-value=0.7 Score=37.70 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=37.6
Q ss_pred CCCHHHHHhHcCCCcccHHHHHHHHhccCceeeccCCCCCceEecCc
Q 018565 52 PITLNELASALKCDPSLLQRIMRFLIHLKFFKEVPTSQGSMAFQQTP 98 (354)
Q Consensus 52 ~~t~~elA~~~g~~~~~l~~lL~~L~~~g~l~~~~~~~~~~~y~~t~ 98 (354)
++|-++||+.+|+++..+.|.|+.|...|+++..+ +.+.+.+
T Consensus 146 ~~t~~~lA~~lg~sr~tvsR~l~~L~~~g~I~~~~-----~~i~i~d 187 (202)
T 2zcw_A 146 KATHDELAAAVGSVRETVTKVIGELAREGYIRSGY-----GKIQLLD 187 (202)
T ss_dssp ECCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-----TEEEESC
T ss_pred CCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEeCC-----CEEEEeC
Confidence 68999999999999999999999999999999876 6666554
Done!