Query 018567
Match_columns 354
No_of_seqs 245 out of 1361
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 10:05:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018567.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018567hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15171 lipopolysaccharide 1, 100.0 1.1E-50 2.5E-55 391.4 19.8 267 65-348 23-290 (334)
2 cd06429 GT8_like_1 GT8_like_1 100.0 8.5E-50 1.8E-54 371.4 20.9 237 68-344 1-256 (257)
3 PLN02718 Probable galacturonos 100.0 4.7E-49 1E-53 392.7 19.4 280 62-353 308-598 (603)
4 PLN02742 Probable galacturonos 100.0 1.2E-48 2.6E-53 385.3 20.7 280 62-353 222-530 (534)
5 PLN02829 Probable galacturonos 100.0 9E-49 2E-53 389.8 18.1 280 62-353 326-634 (639)
6 PLN02523 galacturonosyltransfe 100.0 5.6E-48 1.2E-52 380.8 20.7 280 62-353 243-554 (559)
7 PLN02910 polygalacturonate 4-a 100.0 2.2E-47 4.8E-52 379.3 18.4 279 63-353 341-652 (657)
8 PLN02870 Probable galacturonos 100.0 3.8E-46 8.2E-51 366.8 17.1 275 62-352 201-526 (533)
9 cd06431 GT8_LARGE_C LARGE cata 100.0 2.2E-45 4.8E-50 346.1 19.2 265 68-350 3-274 (280)
10 PLN02769 Probable galacturonos 100.0 3.4E-45 7.3E-50 366.6 18.7 273 63-353 326-625 (629)
11 PLN02659 Probable galacturonos 100.0 4.6E-45 9.9E-50 359.3 17.0 279 62-353 202-528 (534)
12 PLN02867 Probable galacturonos 100.0 1.2E-44 2.6E-49 357.7 17.4 276 62-352 206-529 (535)
13 cd00505 Glyco_transf_8 Members 100.0 1.7E-43 3.6E-48 328.4 21.9 239 68-327 1-246 (246)
14 cd04194 GT8_A4GalT_like A4GalT 100.0 1.4E-43 3.1E-48 328.9 16.6 241 68-327 1-248 (248)
15 COG1442 RfaJ Lipopolysaccharid 100.0 2.7E-43 5.9E-48 335.1 18.2 261 67-347 2-264 (325)
16 PF01501 Glyco_transf_8: Glyco 100.0 1.1E-40 2.4E-45 306.7 13.8 247 69-328 1-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 1.9E-38 4.2E-43 298.8 20.7 256 68-347 1-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 1.1E-37 2.3E-42 289.5 17.9 233 68-320 1-239 (248)
19 PLN00176 galactinol synthase 100.0 2E-30 4.2E-35 247.9 21.3 239 67-330 24-271 (333)
20 cd02537 GT8_Glycogenin Glycoge 100.0 1.7E-30 3.8E-35 240.4 16.4 212 70-331 4-218 (240)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.9 1.7E-24 3.7E-29 202.7 16.0 214 70-329 4-242 (278)
22 KOG1879 UDP-glucose:glycoprote 99.5 1.3E-13 2.9E-18 146.0 8.5 254 63-345 1177-1444(1470)
23 COG5597 Alpha-N-acetylglucosam 98.9 2.5E-10 5.5E-15 106.0 1.3 167 153-344 155-355 (368)
24 PF03407 Nucleotid_trans: Nucl 97.3 0.0013 2.8E-08 59.4 9.2 139 154-320 52-201 (212)
25 PF11051 Mannosyl_trans3: Mann 97.0 0.0023 4.9E-08 60.5 8.1 110 70-191 4-114 (271)
26 PLN03182 xyloglucan 6-xylosylt 96.3 0.013 2.8E-07 57.5 7.7 139 164-329 195-366 (429)
27 PF05637 Glyco_transf_34: gala 94.7 0.019 4.1E-07 53.2 2.4 151 154-324 60-234 (239)
28 cd02515 Glyco_transf_6 Glycosy 94.0 4.6 9.9E-05 38.0 16.2 201 66-295 34-247 (271)
29 KOG1950 Glycosyl transferase, 90.5 0.32 6.9E-06 48.0 4.3 94 230-330 196-291 (369)
30 KOG1928 Alpha-1,4-N-acetylgluc 89.3 0.49 1.1E-05 46.3 4.3 19 172-190 242-260 (409)
31 PF03414 Glyco_transf_6: Glyco 88.1 22 0.00048 34.5 14.6 199 67-294 100-311 (337)
32 PF00535 Glycos_transf_2: Glyc 83.9 11 0.00024 30.8 9.4 91 79-190 10-102 (169)
33 cd06439 CESA_like_1 CESA_like_ 76.0 38 0.00081 30.4 10.9 103 67-190 30-133 (251)
34 PLN03181 glycosyltransferase; 74.8 11 0.00023 37.7 7.1 105 164-296 196-327 (453)
35 PRK05454 glucosyltransferase M 72.9 39 0.00084 36.3 11.4 110 66-189 124-243 (691)
36 PF04765 DUF616: Protein of un 70.1 9.8 0.00021 36.5 5.6 48 155-203 141-189 (305)
37 cd06421 CESA_CelA_like CESA_Ce 69.3 58 0.0013 28.6 10.4 99 68-184 3-101 (234)
38 TIGR03111 glyc2_xrt_Gpos1 puta 69.1 42 0.00091 33.7 10.3 103 67-189 50-154 (439)
39 PF07801 DUF1647: Protein of u 66.8 30 0.00066 29.4 7.3 68 64-138 58-125 (142)
40 cd06423 CESA_like CESA_like is 66.7 48 0.001 26.8 8.7 87 80-187 10-99 (180)
41 PF04488 Gly_transf_sug: Glyco 66.0 3.1 6.8E-05 32.9 1.2 31 153-188 66-97 (103)
42 PF03071 GNT-I: GNT-I family; 65.6 28 0.0006 35.2 8.0 115 67-189 94-213 (434)
43 cd02510 pp-GalNAc-T pp-GalNAc- 65.5 62 0.0013 30.3 10.2 91 80-189 12-106 (299)
44 cd04192 GT_2_like_e Subfamily 65.4 44 0.00095 29.2 8.7 96 78-189 8-105 (229)
45 cd04186 GT_2_like_c Subfamily 63.4 80 0.0017 25.6 10.2 88 79-189 9-97 (166)
46 cd00761 Glyco_tranf_GTA_type G 60.9 78 0.0017 24.7 8.8 30 79-110 9-38 (156)
47 cd06913 beta3GnTL1_like Beta 1 59.6 95 0.0021 27.2 9.8 98 79-190 9-108 (219)
48 cd06434 GT2_HAS Hyaluronan syn 59.6 1.1E+02 0.0024 26.9 10.3 98 69-190 3-101 (235)
49 cd06427 CESA_like_2 CESA_like_ 59.4 97 0.0021 27.8 10.0 103 68-189 3-107 (241)
50 PF03314 DUF273: Protein of un 56.9 8.4 0.00018 34.9 2.3 26 159-185 34-59 (222)
51 cd04184 GT2_RfbC_Mx_like Myxoc 56.9 1.2E+02 0.0026 25.9 9.8 101 68-189 3-106 (202)
52 cd02514 GT13_GLCNAC-TI GT13_GL 56.4 75 0.0016 31.0 9.0 40 69-110 3-43 (334)
53 PRK15383 type III secretion sy 55.0 6.5 0.00014 36.3 1.4 23 169-191 220-242 (335)
54 PRK15382 non-LEE encoded effec 54.7 6.7 0.00014 36.3 1.4 24 168-191 211-234 (326)
55 PRK15384 type III secretion sy 54.5 6.4 0.00014 36.4 1.2 23 169-191 217-239 (336)
56 KOG3737 Predicted polypeptide 53.4 49 0.0011 33.0 7.0 95 69-183 158-256 (603)
57 cd04196 GT_2_like_d Subfamily 52.9 1.5E+02 0.0032 25.4 10.5 92 79-190 10-103 (214)
58 cd02520 Glucosylceramide_synth 52.4 1.5E+02 0.0033 25.5 10.7 105 68-189 3-109 (196)
59 PF10111 Glyco_tranf_2_2: Glyc 48.6 1.6E+02 0.0035 27.4 9.9 94 80-189 17-111 (281)
60 PF05704 Caps_synth: Capsular 47.8 33 0.00072 32.4 5.0 93 70-189 48-143 (276)
61 cd06435 CESA_NdvC_like NdvC_li 46.7 93 0.002 27.5 7.7 97 70-184 2-101 (236)
62 cd04195 GT2_AmsE_like GT2_AmsE 46.5 1.8E+02 0.0038 24.8 9.2 84 80-183 13-96 (201)
63 PRK14583 hmsR N-glycosyltransf 44.8 2.9E+02 0.0062 27.7 11.6 101 67-189 76-178 (444)
64 cd04190 Chitin_synth_C C-termi 44.4 48 0.001 30.1 5.4 23 167-189 73-96 (244)
65 cd02525 Succinoglycan_BP_ExoA 42.8 1.8E+02 0.0039 25.5 8.9 101 68-189 2-104 (249)
66 cd06442 DPM1_like DPM1_like re 42.6 2.2E+02 0.0049 24.6 10.3 91 80-190 10-102 (224)
67 TIGR03469 HonB hopene-associat 40.3 3.2E+02 0.0069 26.8 10.9 109 67-189 41-156 (384)
68 PRK10018 putative glycosyl tra 38.9 3.3E+02 0.0072 25.5 11.6 103 67-190 6-109 (279)
69 PF11735 CAP59_mtransfer: Cryp 38.5 1.5E+02 0.0032 27.6 7.6 114 76-192 12-137 (241)
70 cd04191 Glucan_BSP_ModH Glucan 36.9 2.9E+02 0.0063 25.5 9.5 35 154-189 83-118 (254)
71 PRK11204 N-glycosyltransferase 36.3 3.7E+02 0.0079 26.4 10.7 101 67-189 55-157 (420)
72 PF13896 Glyco_transf_49: Glyc 35.3 89 0.0019 30.1 5.9 120 66-188 25-148 (317)
73 TIGR03472 HpnI hopanoid biosyn 33.4 4E+02 0.0086 25.9 10.3 101 67-184 42-143 (373)
74 PLN02726 dolichyl-phosphate be 32.2 3.7E+02 0.008 24.0 10.8 106 67-190 10-117 (243)
75 cd04185 GT_2_like_b Subfamily 29.9 3.2E+02 0.007 23.2 8.2 88 80-185 10-97 (202)
76 cd06420 GT2_Chondriotin_Pol_N 29.9 2.9E+02 0.0062 22.9 7.7 91 79-190 9-103 (182)
77 cd06422 NTP_transferase_like_1 28.7 1.3E+02 0.0028 26.6 5.5 23 169-191 98-120 (221)
78 KOG4748 Subunit of Golgi manno 28.4 79 0.0017 31.1 4.2 149 164-327 173-336 (364)
79 cd06438 EpsO_like EpsO protein 25.6 4.1E+02 0.0088 22.4 8.5 31 80-110 10-40 (183)
80 PF01445 SH: Viral small hydro 25.6 97 0.0021 21.7 3.0 22 1-22 1-22 (57)
81 cd06437 CESA_CaSu_A2 Cellulose 25.5 4.6E+02 0.01 23.0 9.1 41 68-110 3-43 (232)
82 cd06433 GT_2_WfgS_like WfgS an 25.0 4E+02 0.0087 22.1 8.3 87 79-188 10-97 (202)
83 cd04179 DPM_DPG-synthase_like 20.5 4.9E+02 0.011 21.5 10.1 93 79-190 9-103 (185)
84 PF03452 Anp1: Anp1; InterPro 20.4 5.8E+02 0.013 24.1 8.2 110 64-179 23-154 (269)
85 PF13641 Glyco_tranf_2_3: Glyc 20.4 1.4E+02 0.0031 26.0 4.1 105 68-189 3-109 (228)
86 PRK10073 putative glycosyl tra 20.1 7.7E+02 0.017 23.5 10.7 101 67-190 7-109 (328)
No 1
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=1.1e-50 Score=391.36 Aligned_cols=267 Identities=19% Similarity=0.320 Sum_probs=199.0
Q ss_pred CCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCccccccccc
Q 018567 65 AEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLIST 143 (354)
Q Consensus 65 ~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~ 143 (354)
++.||||+++|++|+.+++|+|.||++|+++ ..++|||++++++++ .+..+.+.+.++ .+++++.+|.+.+.+..+.
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~~-~~i~~~~id~~~~~~~~~~ 100 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQYN-TRINIYLINCERLKSLPST 100 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhcC-CeEEEEEeCHHHHhCCccc
Confidence 3689999999999999999999999999875 579999999999972 112223333454 4788899887766654332
Q ss_pred chhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCcccc
Q 018567 144 SIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLS 223 (354)
Q Consensus 144 ~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~ 223 (354)
.+.+..+|+||++|++||++++||||||+|+||++||++||++||+++.++||+.++... .|..+...
T Consensus 101 ----~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~--------~~~~~~~~ 168 (334)
T PRK15171 101 ----KNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAE--------WWSKRAQS 168 (334)
T ss_pred ----CcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchh--------HHHHHHHh
Confidence 356678999999999999779999999999999999999999999867777766543211 12222212
Q ss_pred cccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCcccccCCCCCCcccc
Q 018567 224 LTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRG 303 (354)
Q Consensus 224 ~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~~wN~~~~~~~~~~~ 303 (354)
.+..+....|||||||||||++||++++++++++++........+.++|||+||.+|.|+++.||.+||++.........
T Consensus 169 l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~~ 248 (334)
T PRK15171 169 LQTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELKD 248 (334)
T ss_pred cCCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHHHh
Confidence 22212124699999999999999999999999999875321122357999999999999999999999987421111111
Q ss_pred ccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCC
Q 018567 304 LCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQT 348 (354)
Q Consensus 304 ~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~ 348 (354)
.+......+++||||+|+.|||+.... +|..++||.|...+|
T Consensus 249 ~~~~~~~~~p~IIHy~G~~KPW~~~~~---~~~~~~f~~~~~~sp 290 (334)
T PRK15171 249 SVINPVNDETVFIHYIGPTKPWHSWAD---YPVSQYFLKAKEASP 290 (334)
T ss_pred cccccccCCCEEEEECCCCCCCCCCCC---CchHHHHHHHHhcCC
Confidence 111111245799999999999987543 467899999988765
No 2
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=8.5e-50 Score=371.36 Aligned_cols=237 Identities=31% Similarity=0.569 Sum_probs=193.1
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhh-CCCeeEEEEEcCCcccccccccc--
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHS-FPSLSFQIYPFDDTAVSGLISTS-- 144 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~-~p~~~~~~~~~d~~~~~~~is~~-- 144 (354)
+|||+++| ||+ ++++++.|++.|++++++++|||++++++. +.+++..... ....+++++.++...+.+.....
T Consensus 1 ~hiv~~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~-~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~ 77 (257)
T cd06429 1 IHVVIFSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNY-GAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSL 77 (257)
T ss_pred CCEEEEec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCH-HHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchh
Confidence 69999999 999 678889999999987789999999999997 4555554422 23668999999866543332111
Q ss_pred --------------hhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCccc
Q 018567 145 --------------IRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTS 210 (354)
Q Consensus 145 --------------~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~ 210 (354)
.+.++.++++|+||++|++||+ ++||||||+|+||++||++||++||+ ++++||+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~-~~kvlYLD~Dviv~~dl~eL~~~dl~-~~~~aav~d------- 148 (257)
T cd06429 78 MQLESEADTSNLKQRKPEYISLLNFARFYLPELFPK-LEKVIYLDDDVVVQKDLTELWNTDLG-GGVAGAVET------- 148 (257)
T ss_pred hhhhccccccccccCCccccCHHHHHHHHHHHHhhh-hCeEEEEeCCEEEeCCHHHHhhCCCC-CCEEEEEhh-------
Confidence 1345778899999999999994 99999999999999999999999998 788888662
Q ss_pred ccCCCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccc--cCCCCCCccHHHHhhcCCeEecC
Q 018567 211 YFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRM--RIYELGSLPPFLLVFAGNIAPVD 288 (354)
Q Consensus 211 y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~vf~~~i~~L~ 288 (354)
||||||||||+++||+.++++++++|++.+... ..++++|||+||.+|.|++..||
T Consensus 149 ----------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~ 206 (257)
T cd06429 149 ----------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLD 206 (257)
T ss_pred ----------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECC
Confidence 799999999999999999999999999865432 34678999999999999999999
Q ss_pred cccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhcccccc
Q 018567 289 HRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYD 344 (354)
Q Consensus 289 ~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~ 344 (354)
++||+++++++.... .+. ...++||||+|+.|||+..+.. +++++||.|.
T Consensus 207 ~~wN~~~l~~~~~~~--~~~-~~~~~IIHy~G~~KPW~~~~~~---~~~~~w~~yl 256 (257)
T cd06429 207 PSWHVRGLGYNYGIR--PQD-IKAAAVLHFNGNMKPWLRTAIP---SYKELWEKYL 256 (257)
T ss_pred hHHcccCCccccccc--ccc-cCCcEEEEECCCCCCcCCCCCC---hHHHHHHHHh
Confidence 999998776543211 111 2467999999999999987543 6899999985
No 3
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=4.7e-49 Score=392.75 Aligned_cols=280 Identities=25% Similarity=0.443 Sum_probs=216.2
Q ss_pred ccCCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCC-CeeEEEEEcCC-ccccc
Q 018567 62 TCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFP-SLSFQIYPFDD-TAVSG 139 (354)
Q Consensus 62 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p-~~~~~~~~~d~-~~~~~ 139 (354)
..|++.+|||+++|+ |+ +++|+|.|++.|+..++.++|||++++++. +.++.......+ ...++++.++. ..+..
T Consensus 308 l~d~~~~Hia~~sDN-vl-aasVvInSil~Ns~np~~ivFHVvTD~is~-~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~ 384 (603)
T PLN02718 308 YNDPDLYHYVVFSDN-VL-ACSVVVNSTISSSKEPEKIVFHVVTDSLNY-PAISMWFLLNPPGKATIQILNIDDMNVLPA 384 (603)
T ss_pred ccCCcceeEEEEcCC-ce-eEEEEhhhhhhccCCCCcEEEEEEeCCCCH-HHHHHHHHhCCCCCcEEEEEecchhccccc
Confidence 357889999999986 64 999999999999776678999999999997 344332221222 45788888863 11211
Q ss_pred ccc------cchhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccC
Q 018567 140 LIS------TSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFT 213 (354)
Q Consensus 140 ~is------~~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~ 213 (354)
... .+.+..+.++++|+||++|++||. ++||||||+|+||.+||++||++||+ ++++||+++|...+..+..
T Consensus 385 ~~~~~lk~l~s~~~~~~S~~~y~Rl~ipellp~-l~KvLYLD~DvVV~~DL~eL~~iDl~-~~v~aaVedC~~~~~~~~~ 462 (603)
T PLN02718 385 DYNSLLMKQNSHDPRYISALNHARFYLPDIFPG-LNKIVLFDHDVVVQRDLSRLWSLDMK-GKVVGAVETCLEGEPSFRS 462 (603)
T ss_pred cchhhhhhccccccccccHHHHHHHHHHHHhcc-cCEEEEEECCEEecCCHHHHhcCCCC-CcEEEEeccccccccchhh
Confidence 110 012234677899999999999995 99999999999999999999999998 8899999999653211111
Q ss_pred ---CCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCcc
Q 018567 214 ---PTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHR 290 (354)
Q Consensus 214 ---~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~~ 290 (354)
...++++.+...|. ++.||||+|||||||++||++++++++++|++.+.+..+|+.++++++|++|.|++++||++
T Consensus 463 ~~~~lnfs~p~i~~~fn-~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~r 541 (603)
T PLN02718 463 MDTFINFSDPWVAKKFD-PKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKR 541 (603)
T ss_pred hhhhhhccchhhhcccC-CCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChH
Confidence 01133433333443 46899999999999999999999999999998765556677777778889999999999999
Q ss_pred cccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCCCCccC
Q 018567 291 WNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLE 353 (354)
Q Consensus 291 wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~~~~ 353 (354)
||+.++|++...+.+ ..++++||||+|+.|||...+.++ +..+|.+|..++.+|..+
T Consensus 542 WNv~gLG~~~~i~~~---~i~~aaIIHYnG~~KPWle~~i~~---yr~~W~k~v~~~~~~l~~ 598 (603)
T PLN02718 542 WHVLGLGHESGVGAS---DIEQAAVIHYDGVMKPWLDIGIGK---YKRYWNIHVPYHHPYLQQ 598 (603)
T ss_pred HhccCcccccccccc---ccCCCEEEEECCCCCccccCChhh---HHHHHHhhcCCCChHHHh
Confidence 999998875432221 135679999999999999998764 999999999999998543
No 4
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=1.2e-48 Score=385.32 Aligned_cols=280 Identities=27% Similarity=0.495 Sum_probs=230.1
Q ss_pred ccCCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhh-CCCeeEEEEEcCC-ccccc
Q 018567 62 TCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHS-FPSLSFQIYPFDD-TAVSG 139 (354)
Q Consensus 62 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~-~p~~~~~~~~~d~-~~~~~ 139 (354)
..|++..|.|+.+|+ +.++.|+|.|...|+.+|++++|||+||...- ..++..+... ++...++++.++. ..+.+
T Consensus 222 l~d~~l~Hy~ifSdN--vlAasvvvnStv~nsk~P~~~VFHiVTD~~n~-~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~ 298 (534)
T PLN02742 222 LVDNNLYHFCVFSDN--ILATSVVVNSTVSNAKHPDQLVFHLVTDEVNY-GAMQAWFAMNDFKGVTVEVQKIEEFSWLNA 298 (534)
T ss_pred ccCCCcceEEEEecc--chhhhhhhhhhHhhhcCCCcEEEEEeechhhH-HHHHHHHhhCCCCccEEEEEEecccccccc
Confidence 457889999999996 77899999999999999999999999999776 4566666533 4566788888764 22222
Q ss_pred cccc---------------------------chhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCC
Q 018567 140 LIST---------------------------SIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPL 192 (354)
Q Consensus 140 ~is~---------------------------~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl 192 (354)
.++. ..++++.++++|+||+||++||. ++||||||+|+||.+||++||++||
T Consensus 299 ~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~-l~KvlYLD~DvVV~~DL~eL~~~DL 377 (534)
T PLN02742 299 SYVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPA-LEKVVFLDDDVVVQKDLTPLFSIDL 377 (534)
T ss_pred ccchHHHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhc-cCeEEEEeCCEEecCChHHHhcCCC
Confidence 1000 01245678899999999999995 9999999999999999999999999
Q ss_pred CCCcEEEeecccccCcccccCCCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCC
Q 018567 193 EDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGS 272 (354)
Q Consensus 193 ~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~D 272 (354)
+ |+++||+++|..+|.+|.+...|++|.+...|. ++.||||+|||||||++||++++++.+..|++.+.+.++|+.+.
T Consensus 378 ~-~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~-~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~ga 455 (534)
T PLN02742 378 H-GNVNGAVETCLETFHRYHKYLNFSHPLISSHFD-PDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGT 455 (534)
T ss_pred C-CCEEEEeCchhhhhhhhhhhhcccchhhhccCC-CCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccc
Confidence 8 999999999988777777666688887777664 47899999999999999999999998888988766667888888
Q ss_pred ccHHHHhhcCCeEecCcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCCCCcc
Q 018567 273 LPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLL 352 (354)
Q Consensus 273 Qd~LN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~~~ 352 (354)
+++++++|.|+++.||++||+.++|++.-. .+.. ..++.||||+|+.|||...+.+ ++.++|++|..++++|..
T Consensus 456 Lpp~LLaF~g~~~~LD~rWNv~gLG~~~~v-~~~~--i~~aaILHynG~~KPWl~~~i~---~yr~~W~kYl~~s~~fl~ 529 (534)
T PLN02742 456 LPPGLLTFYGLTEPLDRRWHVLGLGYDTNI-DPRL--IESAAVLHFNGNMKPWLKLAIE---RYKPLWERYVNYSHPYLQ 529 (534)
T ss_pred cchHHHHHcCcceecChhheeccccccccc-chhh--ccCCeEEEECCCCCcccccCCc---ccchHHHHHHccCCHHHH
Confidence 889999999999999999999999875321 1121 2467899999999999998775 388899999999999854
Q ss_pred C
Q 018567 353 E 353 (354)
Q Consensus 353 ~ 353 (354)
+
T Consensus 530 ~ 530 (534)
T PLN02742 530 Q 530 (534)
T ss_pred h
Confidence 3
No 5
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=9e-49 Score=389.83 Aligned_cols=280 Identities=25% Similarity=0.459 Sum_probs=222.7
Q ss_pred ccCCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHh-hCCCeeEEEEEcCC-cccc-
Q 018567 62 TCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISH-SFPSLSFQIYPFDD-TAVS- 138 (354)
Q Consensus 62 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~-~~p~~~~~~~~~d~-~~~~- 138 (354)
..|++..|.|+.+|+ +..+.|++.|.+.|+..|+++.|||++|...- ..++.++.. .+....+++..++. ..+.
T Consensus 326 l~dp~l~Hy~ifSdN--VLAasVVVnStv~na~~p~k~VFHivTD~~ny-~aM~~WF~~n~~~~A~v~V~nie~f~wln~ 402 (639)
T PLN02829 326 LEDPQLYHYALFSDN--VLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNY-AAMRMWFLVNPPGKATIQVQNIEEFTWLNS 402 (639)
T ss_pred ccCCccceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccch-HHHHHHHhhCCCccceEEEEehhhcccccc
Confidence 357889999999986 66888999999999999999999999999876 355555432 22233455544431 1110
Q ss_pred -------cccc------------------cc-hhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCC
Q 018567 139 -------GLIS------------------TS-IRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPL 192 (354)
Q Consensus 139 -------~~is------------------~~-~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl 192 (354)
.+-+ .. .++.+.+.++|+|||||++||+ ++||||||+|+||++||++||++||
T Consensus 403 ~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP~-LdKVLYLD~DVVVqgDLseLw~iDL 481 (639)
T PLN02829 403 SYSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFPK-LNKVLFLDDDIVVQKDLTGLWSIDL 481 (639)
T ss_pred cccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhcc-cCeEEEEeCCEEeCCChHHHHhCCC
Confidence 0000 00 1245567889999999999994 9999999999999999999999999
Q ss_pred CCCcEEEeecccccCcccccCCCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCC
Q 018567 193 EDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGS 272 (354)
Q Consensus 193 ~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~D 272 (354)
+ |+++||+++|..+|+.|.....|+++.+...|. ...||||+|||||||++||+++++++++.|++.+.+..+|+.|.
T Consensus 482 ~-gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn-~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlga 559 (639)
T PLN02829 482 K-GNVNGAVETCGESFHRFDRYLNFSNPLISKNFD-PHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGT 559 (639)
T ss_pred C-CceEEEeccchhhhhhhhhhhhccchHhhhccC-CcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccC
Confidence 8 899999999987776666555577776665564 46899999999999999999999999999998776667888888
Q ss_pred ccHHHHhhcCCeEecCcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCCCCcc
Q 018567 273 LPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLL 352 (354)
Q Consensus 273 Qd~LN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~~~ 352 (354)
++++.++|.|++++||++||++++|++. ...+... .+++||||+|+.|||...+.+ +++++|.+|..++.+|..
T Consensus 560 LPp~Ll~F~g~i~~LD~rWNv~GLGy~~-~v~~~~i--~~aaIIHynG~~KPWle~~i~---~yr~lW~kYl~~~~~fl~ 633 (639)
T PLN02829 560 LPPGLITFWKRTYPLDRSWHVLGLGYNP-NVNQRDI--ERAAVIHYNGNMKPWLEIGIP---KYRNYWSKYVDYDQVYLR 633 (639)
T ss_pred CChHHHHhcCceEecChhheecCCCCCc-ccchhcc--cCCeEEEECCCCCccccCCcc---cchHHHHHHHhcCchHHH
Confidence 8888999999999999999999998753 2223333 456999999999999998875 499999999999999865
Q ss_pred C
Q 018567 353 E 353 (354)
Q Consensus 353 ~ 353 (354)
|
T Consensus 634 ~ 634 (639)
T PLN02829 634 E 634 (639)
T ss_pred h
Confidence 4
No 6
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=5.6e-48 Score=380.84 Aligned_cols=280 Identities=23% Similarity=0.468 Sum_probs=212.3
Q ss_pred ccCCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHh-hCCCeeEEEEEcCC-ccccc
Q 018567 62 TCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISH-SFPSLSFQIYPFDD-TAVSG 139 (354)
Q Consensus 62 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~-~~p~~~~~~~~~d~-~~~~~ 139 (354)
..|++..|+|+.+|+ +.+++|+|.|++.|++.+++++|||++++++. ..++.+... ......++++.++. +.+..
T Consensus 243 l~dp~l~Hy~ifSdN--vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~-~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~ 319 (559)
T PLN02523 243 LEDPSLYHYAIFSDN--VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNL-AAMKVMFKMRDLNGAHVEVKAVEDYKFLNS 319 (559)
T ss_pred ccCCCcceEEEecCc--chhhhhhHHHHHHccCCCcceEEEEEeCCCCH-HHHHHHHhhCCCCCcEEEEEEeehhhhccc
Confidence 458889999999997 99999999999999998899999999999987 455555432 22255677777764 22210
Q ss_pred c-------ccc----------------------c-hhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhc
Q 018567 140 L-------IST----------------------S-IRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAA 189 (354)
Q Consensus 140 ~-------is~----------------------~-~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~ 189 (354)
- +.. . ..+.+.++++|+||+||++||+ ++||||||+|+||++||++||+
T Consensus 320 ~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~-ldKVLYLD~DVVVq~DLseLw~ 398 (559)
T PLN02523 320 SYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPK-LHRILFLDDDVVVQKDLTGLWK 398 (559)
T ss_pred ccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcc-cCeEEEEeCCEEecCCHHHHHh
Confidence 0 000 0 0024567789999999999995 9999999999999999999999
Q ss_pred cCCCCCcEEEeecccccCcccccCCCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCC
Q 018567 190 TPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYE 269 (354)
Q Consensus 190 ~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~ 269 (354)
+||+ |+++||+++|...+.+|.....++++.+...|. .+.||||+|||||||++||++++++++..|++.+.+..+|+
T Consensus 399 iDL~-gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFN-s~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~D 476 (559)
T PLN02523 399 IDMD-GKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFN-PKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWK 476 (559)
T ss_pred CcCC-CceEEEehhhhhHHHHHHHhhcccchhhhhCcC-CCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcccccccc
Confidence 9998 899999999954333332221233343333343 46899999999999999999999999987776554445555
Q ss_pred CCCccHHHHhhcCCeEecCcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCCC
Q 018567 270 LGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTP 349 (354)
Q Consensus 270 ~~DQd~LN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 349 (354)
.+.++++|++|.|++++||.+||+.++|++.... .+. ...+.||||+|+.|||...+.. +++++|++|..++.+
T Consensus 477 qdaLpp~LivF~gri~~LD~rWNvlglGy~~~i~--~~~-i~~paIIHYnG~~KPWle~~i~---~yr~~W~kYl~~~~~ 550 (559)
T PLN02523 477 LGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSIS--MDE-IRNAAVIHFNGNMKPWLDIAMN---QFKPLWTKYVDYDME 550 (559)
T ss_pred ccccchHHHHhcCceEecCchhhccCCccCCCcc--ccc-cCCCEEEEECCCCCccccCCCC---cchHHHHHHHccCCH
Confidence 5555566799999999999999999888643111 111 2467999999999999987654 489999999999999
Q ss_pred CccC
Q 018567 350 FLLE 353 (354)
Q Consensus 350 ~~~~ 353 (354)
|..|
T Consensus 551 fl~~ 554 (559)
T PLN02523 551 FVQA 554 (559)
T ss_pred HHHh
Confidence 8543
No 7
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=2.2e-47 Score=379.30 Aligned_cols=279 Identities=27% Similarity=0.458 Sum_probs=222.9
Q ss_pred cCCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHh-hCCCeeEEEEEcCC-cccc--
Q 018567 63 CSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISH-SFPSLSFQIYPFDD-TAVS-- 138 (354)
Q Consensus 63 ~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~-~~p~~~~~~~~~d~-~~~~-- 138 (354)
.|++..|.|+.+|+ +..+.|++.|.+.|+..|+++.|||+||...- ..++.++.. .+....+++..++. ..+.
T Consensus 341 ~dp~l~Hy~ifSDN--VLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny-~aM~~WF~~n~~~~A~V~V~nie~f~wln~~ 417 (657)
T PLN02910 341 EDPSLYHYAIFSDN--VLATSVVVNSTVLHAKEPQKHVFHIVTDKLNF-AAMKMWFIINPPAKATIQVENIDDFKWLNSS 417 (657)
T ss_pred cCCcceeEEEEecc--eeeEEeehhhhhhcccCccceEEEEecCcccc-HHHHHHHhhCCCccceEEEeehhhccccccc
Confidence 47889999999986 66888999999999999999999999999876 345554432 12233444444321 1000
Q ss_pred ------c--------------ccc--------cch-hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhc
Q 018567 139 ------G--------------LIS--------TSI-RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAA 189 (354)
Q Consensus 139 ------~--------------~is--------~~~-~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~ 189 (354)
. ..+ ... ++.+.++++|+||+||++||+ ++||||||+|+||++||++||+
T Consensus 418 ~~pvl~qles~~~~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp~-l~KVLYLD~DVVV~gDLseLw~ 496 (657)
T PLN02910 418 YCSVLRQLESARIKEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYPK-LEKILFLDDDIVVQKDLTPLWS 496 (657)
T ss_pred ccHHHHHHhhhhhhhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhhh-cCeEEEEeCCEEecCchHHHHh
Confidence 0 000 011 134567899999999999995 9999999999999999999999
Q ss_pred cCCCCCcEEEeecccccCcccccCCCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCC
Q 018567 190 TPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYE 269 (354)
Q Consensus 190 ~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~ 269 (354)
+||+ |+++||+++|..+|..+.....|+++.+...|. ...||||+|||||||++||++++++.+..|++.+.+.++|+
T Consensus 497 iDL~-g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFN-s~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~d 574 (657)
T PLN02910 497 IDMQ-GMVNGAVETCKESFHRFDKYLNFSNPKISENFD-PNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWK 574 (657)
T ss_pred CCcC-CceEEEecccchhhhhhhhhhccCChhhhhccC-CCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccc
Confidence 9998 889999999988776666666677777766665 47999999999999999999999998888888777677787
Q ss_pred CCCccHHHHhhcCCeEecCcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCCC
Q 018567 270 LGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTP 349 (354)
Q Consensus 270 ~~DQd~LN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 349 (354)
+|.++++.++|.|++.+||++||++++|++...+.+ . ..+++||||+|+.|||...+.+ ++.++|.+|..++.+
T Consensus 575 qgsLPpgLLvF~g~i~pLD~rWNv~GLGyd~~v~~~-~--i~~AAVLHynG~~KPWl~l~i~---~Yr~~W~kYl~~d~~ 648 (657)
T PLN02910 575 LGSLPPGLITFYNLTYPLDRSWHVLGLGYDPALNQT-E--IENAAVVHYNGNYKPWLDLAIA---KYKPYWSRYVQYDNP 648 (657)
T ss_pred cCCCChHHHHHhCceeecCchheecCCCCCcccccc-c--ccCcEEEEeCCCCCcccccCcc---cchHHHHHHccCCCh
Confidence 777777889999999999999999999987654433 1 3468999999999999998875 499999999999999
Q ss_pred CccC
Q 018567 350 FLLE 353 (354)
Q Consensus 350 ~~~~ 353 (354)
|..+
T Consensus 649 fl~~ 652 (657)
T PLN02910 649 YLQL 652 (657)
T ss_pred HHHh
Confidence 8543
No 8
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=3.8e-46 Score=366.84 Aligned_cols=275 Identities=24% Similarity=0.474 Sum_probs=209.8
Q ss_pred ccCCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHh-hCCCeeEEEEEcCC-ccccc
Q 018567 62 TCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISH-SFPSLSFQIYPFDD-TAVSG 139 (354)
Q Consensus 62 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~-~~p~~~~~~~~~d~-~~~~~ 139 (354)
..|++..|.|+.+|+ +..+.|++.|.+.|+..|+++.|||+||...- ..++.++.. .+....+++..++. +.+..
T Consensus 201 l~dp~~~Hy~ifSdN--vLAasVvvnStv~~a~~p~~~VFHvvTD~~n~-~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~ 277 (533)
T PLN02870 201 LSDNSYHHFVLSTDN--ILAASVVVSSTVQSSLKPEKIVFHVITDKKTY-AGMHSWFALNSVSPAIVEVKGVHQFDWLTR 277 (533)
T ss_pred ccCCcceeEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCcccc-HHHHHHHhhCCCccceEEEEehhhcccccc
Confidence 458889999999986 66888999999999999999999999999876 345554432 12233444443321 00000
Q ss_pred -----------------------cc----cc-----------chhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEe
Q 018567 140 -----------------------LI----ST-----------SIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLV 181 (354)
Q Consensus 140 -----------------------~i----s~-----------~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~ 181 (354)
.. +. ..++++.++++|+||+||++|| +++||||||+|+||+
T Consensus 278 ~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP-~LdKVLYLD~DVVVq 356 (533)
T PLN02870 278 ENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFP-NLDKVVFLDDDVVIQ 356 (533)
T ss_pred ccchHHHHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhh-hcCeEEEEeCCEEec
Confidence 00 00 0134567789999999999999 599999999999999
Q ss_pred cChHhhhccCCCCCcEEEeecccccC--------cccccCCCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHH
Q 018567 182 DDISKLAATPLEDHAVLAAPEYCNAN--------FTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTR 253 (354)
Q Consensus 182 ~DI~~L~~~dl~~~~~~aa~e~~~~~--------~~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~ 253 (354)
+||++||++||+ |+++||+++|... +..|++ +++|....++. ++.||||||||||||++||++++++
T Consensus 357 gDLseLw~iDL~-gkviaAVeDc~~~~~~~~~~~~~~YfN---fs~p~i~~~fd-~~~cyfNSGVlLINL~~WRe~nITe 431 (533)
T PLN02870 357 RDLSPLWDIDLG-GKVNGAVETCRGEDEWVMSKRFRNYFN---FSHPLIAKNLD-PEECAWAYGMNIFDLRAWRKTNIRE 431 (533)
T ss_pred CcHHHHhhCCCC-CceEEEEccccccchhhhhhhhhhhcc---cccchhhcccC-cccceeeccchhccHHHHHHcChHH
Confidence 999999999998 9999999998531 223443 55666666664 4699999999999999999999999
Q ss_pred HHHHHHHHhccccCCCCCCccHH---HHhhcCCeEecCcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCC
Q 018567 254 KIVEWMELQKRMRIYELGSLPPF---LLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDA 330 (354)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~DQd~L---N~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~ 330 (354)
++++|++.+.... +.+.|||+| |++|.|++++||.+||+.++|++.- .. .+. ..+++||||+|+.|||+..+.
T Consensus 432 k~~~~l~~n~~~~-l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~-~~-~~~-i~~aaIIHY~G~~KPW~~~~~ 507 (533)
T PLN02870 432 TYHSWLKENLKSN-LTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSK-TN-IES-VKKAAVIHYNGQSKPWLEIGF 507 (533)
T ss_pred HHHHHHHhhhhcC-ceecccccccHhHHHhcCceEECChHHhcCCCCCccc-cc-ccc-cCCcEEEEECCCCCCccccCc
Confidence 9999998653222 245777777 7899999999999999998886431 11 112 346799999999999998776
Q ss_pred CCCCCchhccccccccCCCCcc
Q 018567 331 NRPCPLDALWAPYDLLQTPFLL 352 (354)
Q Consensus 331 ~~~~~~~~lW~~Y~~~~~~~~~ 352 (354)
+ +++.+|.+|..++.+|..
T Consensus 508 ~---~yr~~W~kYl~~s~~fl~ 526 (533)
T PLN02870 508 E---HLRPFWTKYVNYSNDFIR 526 (533)
T ss_pred c---chhHHHHHHHccCchHhh
Confidence 5 489999999999999854
No 9
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=2.2e-45 Score=346.13 Aligned_cols=265 Identities=18% Similarity=0.269 Sum_probs=186.2
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHh-hCCCeeEEEEEcCCcccccccccchh
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISH-SFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~-~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
+.||++. .+|+++++|+|+||+.|+. .+++|||++++++. +.+++..+. ...+.++.++.++. ....++....
T Consensus 3 ~~iv~~~-~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~-~~~~~l~~~~~~~~~~i~f~~i~~--~~~~~~~~~~ 76 (280)
T cd06431 3 VAIVCAG-YNASRDVVTLVKSVLFYRR--NPLHFHLITDEIAR-RILATLFQTWMVPAVEVSFYNAEE--LKSRVSWIPN 76 (280)
T ss_pred EEEEEcc-CCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCH-HHHHHHHHhccccCcEEEEEEhHH--hhhhhccCcc
Confidence 5678888 8999999999999999975 67999999999987 333322222 12355777787742 1111111000
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhcc--CCCCCcEEEeecccccCcccccCCCCCCCccccc
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAAT--PLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSL 224 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~--dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~ 224 (354)
.++....+|+||++|++||++++||||||+|+||++||++||++ ++.++.++||+++.. .++....|.. ..
T Consensus 77 ~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~----~~~~~~~~~~---~~ 149 (280)
T cd06431 77 KHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS----DWYLGNLWKN---HR 149 (280)
T ss_pred cchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch----hhhhhhhhhc---cC
Confidence 12222347899999999997799999999999999999999998 787678888887532 1111111110 00
Q ss_pred ccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhcc-ccCCCCCCccHHHHhhcCC---eEecCcccccCCCCCCc
Q 018567 225 TFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKR-MRIYELGSLPPFLLVFAGN---IAPVDHRWNQHGLGGDN 300 (354)
Q Consensus 225 ~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~-~~~~~~~DQd~LN~vf~~~---i~~L~~~wN~~~~~~~~ 300 (354)
.+.+ ...|||||||||||++||+.++++++....+.... .....++|||+||.+|.++ ++.||++||++... ..
T Consensus 150 ~~~~-~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~-~~ 227 (280)
T cd06431 150 PWPA-LGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSD-HT 227 (280)
T ss_pred CCcc-cccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCc-cc
Confidence 1111 13599999999999999999999998766654321 1123679999999999999 89999999998422 11
Q ss_pred cccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCCCC
Q 018567 301 YRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPF 350 (354)
Q Consensus 301 ~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~ 350 (354)
....+... ...++||||+|+.|||...... .+++++|..|..+++..
T Consensus 228 ~~~~~~~~-~~~p~IIHf~g~~KPW~~~~~~--~~~~~~~~~~~~~~~~~ 274 (280)
T cd06431 228 RSEQCYRD-VSDLKVIHWNSPKKLRVKNKHV--EFFRNLYLTFLEYDGNL 274 (280)
T ss_pred hHhHhhcC-cCCCEEEEeCCCCCCCCcCCCC--hHHHHHHHHHHhcCchh
Confidence 11122111 3467999999999999976442 36999999999988653
No 10
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=3.4e-45 Score=366.63 Aligned_cols=273 Identities=22% Similarity=0.392 Sum_probs=208.0
Q ss_pred cCCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhh-CCCeeEEEEEcCCcccc---
Q 018567 63 CSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHS-FPSLSFQIYPFDDTAVS--- 138 (354)
Q Consensus 63 ~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~-~p~~~~~~~~~d~~~~~--- 138 (354)
.|++..|.|+.+|+ +..+.|+|.|...|+..|+++.|||+||...- ..++.++... +....+++..++.-.+.
T Consensus 326 ~d~~l~Hy~ifSdN--vlAasvvvNStv~na~~p~~~VFHiVTD~~n~-~am~~WF~~n~~~~a~v~v~n~e~~~~~~~~ 402 (629)
T PLN02769 326 SDPSLRHYVIFSKN--VLAASVVINSTVVHSRESGNIVFHVLTDAQNY-YAMKHWFDRNSYKEAAVQVLNIEDLILKDLD 402 (629)
T ss_pred cCCccceEEEEecc--ceeeeeehhhhhhhccCccceEEEEecChhhH-HHHHHHHhcCCCccceEEEeeeeeeeecccc
Confidence 47889999999986 67889999999999999999999999998765 4555555421 22223333332211000
Q ss_pred -------------------cccc-c-chhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcE
Q 018567 139 -------------------GLIS-T-SIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAV 197 (354)
Q Consensus 139 -------------------~~is-~-~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~ 197 (354)
+..+ . ..++++.++++|+||+||++||+ ++||||||+|+||++||++||++||+ |++
T Consensus 403 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP~-LdKVLYLD~DVVVqgDLseLw~iDL~-gkv 480 (629)
T PLN02769 403 KFALKQLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFKK-LKKVVVLDDDVVVQRDLSFLWNLDMG-GKV 480 (629)
T ss_pred hHHHHhhccchhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhhh-cCeEEEEeCCEEecCcHHHHhcCCCC-CCe
Confidence 0001 1 11446678899999999999995 99999999999999999999999998 889
Q ss_pred EEeecccccCcccccCCCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhcc--ccCCCCCCccH
Q 018567 198 LAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKR--MRIYELGSLPP 275 (354)
Q Consensus 198 ~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~--~~~~~~~DQd~ 275 (354)
+||+++|...+..+.. |.. ...| .++.||||+|||||||++||+.+++++++.|++.... ...++.++|++
T Consensus 481 iAAVedc~~rl~~~~~---yl~---~~~F-~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~ 553 (629)
T PLN02769 481 NGAVQFCGVRLGQLKN---YLG---DTNF-DTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPA 553 (629)
T ss_pred EEEehhhhhhhhhhhh---hhc---ccCC-CccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCH
Confidence 9999999643322210 000 1223 2468999999999999999999999999999876532 35677899999
Q ss_pred HHHhhcCCeEecCcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccCCCCccC
Q 018567 276 FLLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFLLE 353 (354)
Q Consensus 276 LN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~~~~ 353 (354)
+|++|.|++++||.+||++++|++.-. ..+. ...++||||+|+.|||+..+.. +++++|+.|..++.+|..|
T Consensus 554 lnlvF~g~v~~LD~rWNv~gLG~~~~i--~~~~-i~~paIIHYnG~~KPW~e~~i~---~yr~~W~kYl~~~~~fl~~ 625 (629)
T PLN02769 554 SLLTFQDLIYPLDDRWVLSGLGHDYGI--DEQA-IKKAAVLHYNGNMKPWLELGIP---KYKKYWKRFLNRDDRFMDE 625 (629)
T ss_pred HHHHhcCeEEECCHHHccccccccccc--cccc-cCCcEEEEECCCCCCccCCCCC---hHHHHHHHHhccCChHHhh
Confidence 999999999999999999988864311 1122 2467999999999999987654 5899999999999998654
No 11
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=4.6e-45 Score=359.28 Aligned_cols=279 Identities=23% Similarity=0.432 Sum_probs=206.4
Q ss_pred ccCCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHh-hCCCeeEEEEEcCC-ccccc
Q 018567 62 TCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISH-SFPSLSFQIYPFDD-TAVSG 139 (354)
Q Consensus 62 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~-~~p~~~~~~~~~d~-~~~~~ 139 (354)
..|++..|.|+.+|+ +..+.|++.|.+.|+..|+++.|||+||...- ..++.++.. .+....+++..++. +.+..
T Consensus 202 l~d~~l~Hy~ifSdN--vLAasVVvnStv~~a~~p~~~VFHivTD~~ny-~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~ 278 (534)
T PLN02659 202 LVDNSYFHFVLASDN--ILAASVVANSLVQNALRPHKFVLHIITDRKTY-SPMQAWFSLHPLSPAIIEVKALHHFDWFAK 278 (534)
T ss_pred cCCCCcceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCcccc-HHHHHHHhhCCCccceEEEEeehhcccccc
Confidence 457889999999986 66888999999999999999999999999876 345554432 22233444443321 10000
Q ss_pred -----------------cc-------------cc--------chhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEe
Q 018567 140 -----------------LI-------------ST--------SIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLV 181 (354)
Q Consensus 140 -----------------~i-------------s~--------~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~ 181 (354)
.+ +. ..++++.|.++|+||+||++|| +++||||||+|+||+
T Consensus 279 ~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP-~LdKVLYLD~DVVVq 357 (534)
T PLN02659 279 GKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFP-SLNKVVFLDDDIVVQ 357 (534)
T ss_pred cccHHHHHHhhhhhhhhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHHHhh-hcCeEEEeeCCEEEc
Confidence 00 00 0123445668999999999999 499999999999999
Q ss_pred cChHhhhccCCCCCcEEEeecccccC--c---ccccCCCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHH
Q 018567 182 DDISKLAATPLEDHAVLAAPEYCNAN--F---TSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIV 256 (354)
Q Consensus 182 ~DI~~L~~~dl~~~~~~aa~e~~~~~--~---~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~ 256 (354)
+||++||++||+ |+++||+++|... + .++.....++++.+...|. .+.||||+|||||||++||+++++++++
T Consensus 358 gDLseLw~iDL~-gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn-~~~cYfNsGVlLINLk~WRe~nITek~l 435 (534)
T PLN02659 358 TDLSPLWDIDMN-GKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFD-PNECAWAYGMNIFDLEAWRKTNISSTYH 435 (534)
T ss_pred CchHHHHhCCCC-CcEEEEeeccccccchhhhHHHHHhhcccchhhhhccC-ccccceecceeEeeHHHHHhcChHHHHH
Confidence 999999999998 8999999998532 1 1111100123333333443 3589999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCccHH---HHhhcCCeEecCcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCC
Q 018567 257 EWMELQKRMRIYELGSLPPF---LLVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRP 333 (354)
Q Consensus 257 ~~~~~~~~~~~~~~~DQd~L---N~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~ 333 (354)
+|++.+.... ..+.|||+| |++|.|++++||.+||+.++|++.-. . .+. .+.++||||+|+.|||+..+.+
T Consensus 436 ~~l~~n~~~~-l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~-~-~~~-i~~paIIHYnG~~KPW~~~~~~-- 509 (534)
T PLN02659 436 HWLEENLKSD-LSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENT-S-LAD-AESAGVVHFNGRAKPWLDIAFP-- 509 (534)
T ss_pred HHHHhccccc-ccccccccchHHHHHhcCCEEECChhheecCCcccccc-c-ccc-cCCcEEEEECCCCCccccccCC--
Confidence 9998653222 245678888 69999999999999999888764311 1 112 3567999999999999998765
Q ss_pred CCchhccccccccCCCCccC
Q 018567 334 CPLDALWAPYDLLQTPFLLE 353 (354)
Q Consensus 334 ~~~~~lW~~Y~~~~~~~~~~ 353 (354)
+++.+|.+|..++.+|..|
T Consensus 510 -~yr~~W~kYl~~s~~fl~~ 528 (534)
T PLN02659 510 -QLRPLWAKYIDSSDKFIKS 528 (534)
T ss_pred -cchhHHHHHhccCCHHHHh
Confidence 5999999999999998543
No 12
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=1.2e-44 Score=357.66 Aligned_cols=276 Identities=25% Similarity=0.484 Sum_probs=205.0
Q ss_pred ccCCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHh-hCCCeeEEEEEcCC-ccccc
Q 018567 62 TCSAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISH-SFPSLSFQIYPFDD-TAVSG 139 (354)
Q Consensus 62 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~-~~p~~~~~~~~~d~-~~~~~ 139 (354)
..|++..|.|+.+|+ +..+.|++.|.+.|+..|+++.|||+||...- ..++.++.. .+....+++..++. ..+..
T Consensus 206 l~d~~~~Hy~ifSdN--vLAasVvvnStv~~a~~p~~~VfHvvTD~~ny-~aM~~WF~~n~~~~a~v~V~~~~~f~wl~~ 282 (535)
T PLN02867 206 LTDPSFHHVVLLTDN--VLAASVVISSTVQNAANPEKLVFHIVTDKKTY-TPMHAWFAINSIKSAVVEVKGLHQYDWSQE 282 (535)
T ss_pred ccCCCcceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCcccc-HHHHHHHhhCCCccceEEEEeehhcccccc
Confidence 357889999999986 66888999999999999999999999999876 345554432 12223344443321 10000
Q ss_pred c-------------c----------------------ccchhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecCh
Q 018567 140 L-------------I----------------------STSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDI 184 (354)
Q Consensus 140 ~-------------i----------------------s~~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI 184 (354)
- + ....++++.|.++|+||+||++||+ ++||||||+|+||++||
T Consensus 283 ~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP~-LdKVLYLD~DVVVqgDL 361 (535)
T PLN02867 283 VNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNHLRIYIPELFPD-LNKIVFLDDDVVVQHDL 361 (535)
T ss_pred ccccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHHHHHHHHHHhhc-cCeEEEecCCEEEcCch
Confidence 0 0 0012345667899999999999994 99999999999999999
Q ss_pred HhhhccCCCCCcEEEeecc--cccC------cccccCCCCCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHH
Q 018567 185 SKLAATPLEDHAVLAAPEY--CNAN------FTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIV 256 (354)
Q Consensus 185 ~~L~~~dl~~~~~~aa~e~--~~~~------~~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~ 256 (354)
++||++||+ |+++||+.+ |... +.+|++ +++|.+..++. ++.||||||||||||++||+.+++++++
T Consensus 362 seLwdiDL~-gkviaAV~D~~c~~~~~~~~~~~~YlN---fsnp~i~~~~~-p~~cYFNSGVmLINL~~WRe~nITek~~ 436 (535)
T PLN02867 362 SSLWELDLN-GKVVGAVVDSWCGDNCCPGRKYKDYLN---FSHPLISSNLD-QERCAWLYGMNVFDLKAWRRTNITEAYH 436 (535)
T ss_pred HHHHhCcCC-CCeEEEEeccccccccccchhhhhhcc---ccchhhhccCC-CCCcceecceeeeeHHHHHHhcHHHHHH
Confidence 999999999 888888754 3211 123332 34454444453 4689999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCccHHH---HhhcCCeEecCcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCC
Q 018567 257 EWMELQKRMRIYELGSLPPFL---LVFAGNIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRP 333 (354)
Q Consensus 257 ~~~~~~~~~~~~~~~DQd~LN---~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~ 333 (354)
+|++.+.... ..+.|||.|| ++|.|++++||.+||+.++|++.- ....+. ...++||||+|+.|||+..+.+
T Consensus 437 ~~Le~n~~~~-~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~-~~~~~~-i~~paIIHYnG~~KPW~e~~~~-- 511 (535)
T PLN02867 437 KWLKLSLNSG-LQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPP-EVPREI-LESAAVLHFSGPAKPWLEIGFP-- 511 (535)
T ss_pred HHHHhchhcc-cccccccccchHHHHhcCcEEECChhhcccCCCcccc-cchhhh-cCCcEEEEECCCCCcccccCCC--
Confidence 9998754321 2356788887 499999999999999988776421 111122 3467999999999999998776
Q ss_pred CCchhccccccccCCCCcc
Q 018567 334 CPLDALWAPYDLLQTPFLL 352 (354)
Q Consensus 334 ~~~~~lW~~Y~~~~~~~~~ 352 (354)
+++++|.+|..++.+|..
T Consensus 512 -~yR~~W~kyl~~~~~fl~ 529 (535)
T PLN02867 512 -EVRSLWYRHVNFSDKFIR 529 (535)
T ss_pred -chhHHHHHhcCccchHHH
Confidence 589999999999988853
No 13
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=1.7e-43 Score=328.42 Aligned_cols=239 Identities=21% Similarity=0.337 Sum_probs=175.4
Q ss_pred eEEEEEeCc-cchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhh--CCCeeEEEEEcCCcccccccccc
Q 018567 68 IHVAMTLDA-PYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHS--FPSLSFQIYPFDDTAVSGLISTS 144 (354)
Q Consensus 68 i~I~~~~D~-~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~--~p~~~~~~~~~d~~~~~~~is~~ 144 (354)
|||++++++ +|+.+++|+++||++|++. .++|||+++++++ +.++.|... -...+++++.++..........
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~--~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~- 75 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSD--TFKAALDNLRKLYNFNYELIPVDILDSVDSEHL- 75 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccH--HHHHHHHHHHhccCceEEEEeccccCcchhhhh-
Confidence 678866655 9999999999999999874 7999999999987 334444332 1245677777764332221111
Q ss_pred hhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCc-ccccCCCCCCCcccc
Q 018567 145 IRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANF-TSYFTPTFWSNPTLS 223 (354)
Q Consensus 145 ~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~-~~y~~~~~w~~~~~~ 223 (354)
..+.++.+|+||++|+++| +++||||||+|+||++||++||+++++ +..+||+.+|.... ..+ +. ..
T Consensus 76 --~~~~~~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~-~~~~aav~d~~~~~~~~~-----~~---~~ 143 (246)
T cd00505 76 --KRPIKIVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDTPLG-GQELAAAPDPGDRREGKY-----YR---QK 143 (246)
T ss_pred --cCccccceeHHHHHHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCC-CCeEEEccCchhhhccch-----hh---cc
Confidence 2345678999999999999 699999999999999999999999998 78888887775311 111 10 11
Q ss_pred cccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCC---eEecCcccccCCCCCCc
Q 018567 224 LTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGN---IAPVDHRWNQHGLGGDN 300 (354)
Q Consensus 224 ~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~---i~~L~~~wN~~~~~~~~ 300 (354)
.+. ....+||||||||||+++||++++.++++++...+. .+ ..++|||+||.+|.++ +..||++||++..+...
T Consensus 144 ~~~-~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~-~~-~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~ 220 (246)
T cd00505 144 RSH-LAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSL-SS-LSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYR 220 (246)
T ss_pred cCC-CCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhc-cc-CccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccc
Confidence 112 134679999999999999998888888777665432 22 3679999999999998 99999999998654322
Q ss_pred cccccccCCCCCCEEEeccCCCCCCCC
Q 018567 301 YRGLCRDLHPGPVSLLHWSGKGKPWVR 327 (354)
Q Consensus 301 ~~~~~~~l~~~~~~IiHy~g~~KPW~~ 327 (354)
. ..|......+++||||+|+.|||++
T Consensus 221 ~-~~~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 221 S-LNCFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred c-ccchhhhcCCCEEEEeCCCCCCCCC
Confidence 1 1121112356899999999999974
No 14
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=1.4e-43 Score=328.93 Aligned_cols=241 Identities=21% Similarity=0.282 Sum_probs=182.6
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhC--CCeeEEEEEcCCcccccccccch
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSF--PSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~--p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
|||++++|++|+++++|++.||++|++. ++++|||+++++++ +.++.|++.. +..+++++.++.........
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~--~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~--- 74 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISE--ENKKKLKELLKKYNSSIEFIKIDNDDFKFFPA--- 74 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCH--HHHHHHHHHHHhcCCeEEEEEcCHHHHhcCCc---
Confidence 7999999999999999999999999985 67999999999887 3333443322 25578888887654433221
Q ss_pred hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCcccccc
Q 018567 146 RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLT 225 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~ 225 (354)
.....+..+|+||++++++| +++||||||+|+||++||++||++|++ ++.+||+.+|....... + .....
T Consensus 75 ~~~~~~~~~y~rl~l~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~-~~~~aa~~d~~~~~~~~-----~---~~~~~ 144 (248)
T cd04194 75 TTDHISYATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDIDLG-DNLLAAVRDPFIEQEKK-----R---KRRLG 144 (248)
T ss_pred ccccccHHHHHHHHHHHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcC-CCEEEEEecccHHHHHH-----H---HhhcC
Confidence 12345668999999999999 699999999999999999999999997 88888888775422110 0 00111
Q ss_pred cCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCcccccCCCCCCccccc-
Q 018567 226 FSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGL- 304 (354)
Q Consensus 226 ~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~~wN~~~~~~~~~~~~- 304 (354)
. ....+||||||||+|+++||+.+++++++++++... ..+.++||++||.+|.+++..||.+||++..........
T Consensus 145 ~-~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~--~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~ 221 (248)
T cd04194 145 G-YDDGSYFNSGVLLINLKKWREENITEKLLELIKEYG--GRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKS 221 (248)
T ss_pred C-CcccceeeecchheeHHHHHHhhhHHHHHHHHHhCC--CceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccc
Confidence 1 235689999999999999999999999999998643 234679999999999999999999999985432111000
Q ss_pred ----cccCCCCCCEEEeccCCCCCCCC
Q 018567 305 ----CRDLHPGPVSLLHWSGKGKPWVR 327 (354)
Q Consensus 305 ----~~~l~~~~~~IiHy~g~~KPW~~ 327 (354)
......++++||||+|+.|||+.
T Consensus 222 ~~~~~~~~~~~~~~iiHf~g~~KPW~~ 248 (248)
T cd04194 222 KEEQELEEARKNPVIIHYTGSDKPWNK 248 (248)
T ss_pred hhHHHHHHHhcCCEEEEeCCCCCCCCC
Confidence 00112356899999999999973
No 15
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=2.7e-43 Score=335.13 Aligned_cols=261 Identities=23% Similarity=0.336 Sum_probs=194.0
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch--HHHHHHHHhhCCCeeEEEEEcCCcccccccccc
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN--NLLHETISHSFPSLSFQIYPFDDTAVSGLISTS 144 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~--~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~ 144 (354)
.++||+++|.||+.+++|+|+||+.|++. ..+.||+++++++++ +.+.+.+ +.|.. .+.++.+|.+.+...++.
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~-~~f~~-~i~~~~id~~~~~~~~~~- 77 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETA-EPFKS-FIVLEVIDIEPFLDYPPF- 77 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHH-Hhhcc-ceeeEEEechhhhccccc-
Confidence 58999999999999999999999999984 479999999999982 1233332 33532 556677777766655421
Q ss_pred hhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCccccc
Q 018567 145 IRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSL 224 (354)
Q Consensus 145 ~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~ 224 (354)
..+.+.++|+|+++++++|+ ++|+||||+|+||+|||++||+++++ ++.+||+.++.... |.....++
T Consensus 78 --~~~~s~~v~~R~fiadlf~~-~dK~lylD~Dvi~~g~l~~lf~~~~~-~~~~aaV~D~~~~~--------~~~~~~~~ 145 (325)
T COG1442 78 --TKRFSKMVLVRYFLADLFPQ-YDKMLYLDVDVIFCGDLSELFFIDLE-EYYLAAVRDVFSHY--------MKEGALRL 145 (325)
T ss_pred --ccchHHHHHHHHHHHHhccc-cCeEEEEecCEEEcCcHHHHHhcCCC-cceEEEEeehhhhh--------hhhhhhHh
Confidence 13445789999999999997 79999999999999999999999999 88888888754211 11111111
Q ss_pred ccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCcccccCCCCCCccccc
Q 018567 225 TFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGL 304 (354)
Q Consensus 225 ~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~~wN~~~~~~~~~~~~ 304 (354)
.-......|||||||++|++.||+++++++++++++... ..+.++|||+||.+|.+++..||.+||++..........
T Consensus 146 ~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~--~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~ 223 (325)
T COG1442 146 EKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKE--NDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDK 223 (325)
T ss_pred hhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccc--cccCCccccHHHHHHHhhhhccCcccceeehhhhccchh
Confidence 111234789999999999999999999999999987544 334689999999999999999999999985432212111
Q ss_pred cccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccC
Q 018567 305 CRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQ 347 (354)
Q Consensus 305 ~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 347 (354)
+......++.|+||+|+.|||+......++ ...|.......
T Consensus 224 ~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~--~~~w~~i~~~~ 264 (325)
T COG1442 224 YIYPFGDDPVILHYAGPTKPWHSDSSNYPR--SHEWHEILAET 264 (325)
T ss_pred hhccCCCCceEEEecCCCCCCcCccccccH--HHHHHHHHhcC
Confidence 111223567999999999999998765432 45555544433
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=1.1e-40 Score=306.68 Aligned_cols=247 Identities=26% Similarity=0.388 Sum_probs=165.0
Q ss_pred EEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCe-eE-EEEEcCCcccccccccchh
Q 018567 69 HVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSL-SF-QIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 69 ~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~-~~-~~~~~d~~~~~~~is~~~~ 146 (354)
||++++|.+|+.+++|+++||++|++.+..++||+++++.++ +..+.+++..... .+ .+...+.............
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISE--EDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPS 78 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-H--HHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HC
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCH--HHHHHHhhhcccccceeeeccchHHhhhhhhhcccc
Confidence 799999999999999999999999986678999999999886 3344454443322 22 2233332221111112233
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCccccccc
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTF 226 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~ 226 (354)
..+.++.+|+|++++++|+ +++||||||+|+||.+||++||+++++ ++.+||++++. +.... +.........
T Consensus 79 ~~~~~~~~~~rl~i~~ll~-~~drilyLD~D~lv~~dl~~lf~~~~~-~~~~~a~~~~~--~~~~~----~~~~~~~~~~ 150 (250)
T PF01501_consen 79 KRHFSPATFARLFIPDLLP-DYDRILYLDADTLVLGDLDELFDLDLQ-GKYLAAVEDES--FDNFP----NKRFPFSERK 150 (250)
T ss_dssp CTCGGGGGGGGGGHHHHST-TSSEEEEE-TTEEESS-SHHHHC---T-TSSEEEEE------HHHH----TSTTSSEEEC
T ss_pred cccccHHHHHHhhhHHHHh-hcCeEEEEcCCeeeecChhhhhcccch-hhhccccccch--hhhhh----hcccchhhcc
Confidence 3456678999999999997 499999999999999999999999999 88888887621 11111 1111111111
Q ss_pred CCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCcccccCCCCCCccccccc
Q 018567 227 SGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNYRGLCR 306 (354)
Q Consensus 227 ~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~ 306 (354)
.....+||||||||+|+++||++++.++++++++.... .+.++||++||.+|.+++..||.+||++..++ +....+.
T Consensus 151 ~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~-~~~~~~~ 227 (250)
T PF01501_consen 151 QPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLGFPDQDILNIVFYGNIKPLPCRYNCQPSWY-NQSDDYF 227 (250)
T ss_dssp ESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHH-HHTHHHH
T ss_pred cCcccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccCcCchHHHhhhccceeEEECchhccccccc-cccchhh
Confidence 12358999999999999999999999999999875432 34679999999999999999999999985432 0111111
Q ss_pred cCCCCCCEEEeccCCCCCCCCC
Q 018567 307 DLHPGPVSLLHWSGKGKPWVRL 328 (354)
Q Consensus 307 ~l~~~~~~IiHy~g~~KPW~~~ 328 (354)
....++++||||+|..|||...
T Consensus 228 ~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 228 NPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp HHHGCC-SEEE--SSS-TTSTT
T ss_pred HhhcCCeEEEEeCCCCcCCCCC
Confidence 1112568999999999999864
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=1.9e-38 Score=298.75 Aligned_cols=256 Identities=17% Similarity=0.284 Sum_probs=173.6
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhh---CC-CeeEEEEEcCCccccccccc
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHS---FP-SLSFQIYPFDDTAVSGLIST 143 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~---~p-~~~~~~~~~d~~~~~~~is~ 143 (354)
||||+++-++++..+.++|+|++.++. ..++|||++++... +...+.++++ +. .+..+++.+. +... ..
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~-~~~~~~l~~~~~~~~~~i~~~i~~I~---~P~~-~~ 73 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLK-QSFKEKLDDWPELIDRKFNYTLHPIT---FPSG-NA 73 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccC-HHHHHHHHHHHHhccceeeeEEEEEe---cCcc-ch
Confidence 577766665669999999999999985 68999999998444 2444444433 21 1223555542 1110 00
Q ss_pred chhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhcc--CCCCCcEEEeecccccCcccccCCCCCCCcc
Q 018567 144 SIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAAT--PLEDHAVLAAPEYCNANFTSYFTPTFWSNPT 221 (354)
Q Consensus 144 ~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~--dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~ 221 (354)
+..+.+.+|.+|+||++|++|| ++|||||||+|+||.+||++||++ ++++..++|++++....- ..|....
T Consensus 74 ~~ws~l~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~------~~~~~~~ 146 (304)
T cd06430 74 AEWKKLFKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPN------IGWYNRF 146 (304)
T ss_pred hhhhhcccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccc------hhhhhhh
Confidence 1222455678999999999999 699999999999999999999999 998556676654321100 0121111
Q ss_pred cccccCCCCCccceeeeEEEechHHhh-----------hchHHHHHHHHHHhccccCCCCCCccHHHHhhcCC---eEec
Q 018567 222 LSLTFSGRNACYFNTGVMVIDLERWRK-----------GDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGN---IAPV 287 (354)
Q Consensus 222 ~~~~~~~~~~~yFNsGVmlinl~~wR~-----------~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~---i~~L 287 (354)
....+. ...|||||||||||++||+ .++++++++++++.+ .+ ..++|||+||++|.++ ++.|
T Consensus 147 ~~~~~~--~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-l~~~DQDiLN~v~~~~p~~~~~L 222 (304)
T cd06430 147 ARHPYY--GKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYK-LK-ITWGDQDLINIIFHHNPEMLYVF 222 (304)
T ss_pred cccCcc--cccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcc-cC-CCCCCHHHHHHHHcCCCCeEEEc
Confidence 111221 2457999999999999999 778999999988644 23 3579999999999998 9999
Q ss_pred CcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhccccccccC
Q 018567 288 DHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQ 347 (354)
Q Consensus 288 ~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 347 (354)
|++||++... ..+...|.....+.++||||+++.| .. .+.| .++.++.....++
T Consensus 223 p~~wN~~~d~-~~y~~~~~~~~~~~~~~~H~n~~~~--~~--~~~~-~f~~~~~~~~~~~ 276 (304)
T cd06430 223 PCHWNYRPDH-CMYGSNCKAAEEEGVFILHGNRGVY--HS--DKQP-AFRAVYEAIREYT 276 (304)
T ss_pred CccccCCccc-eeecccccccccccceEEEcCCCCC--CC--ccch-HHHHHHHHHHhcc
Confidence 9999987521 1112234433446789999998666 32 2222 4677776555544
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=1.1e-37 Score=289.48 Aligned_cols=233 Identities=16% Similarity=0.231 Sum_probs=163.9
Q ss_pred eEEEE-EeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch--HHHHHHHHhhCCCeeEEEEEcC-Cccccccccc
Q 018567 68 IHVAM-TLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN--NLLHETISHSFPSLSFQIYPFD-DTAVSGLIST 143 (354)
Q Consensus 68 i~I~~-~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~--~~l~~~l~~~~p~~~~~~~~~d-~~~~~~~is~ 143 (354)
|||+. ++|+.|+.+++|++.||++|+. .+++|||++++++++ +.+.+.. +.+ +.+++++.++ +..+.....
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~-~~~-~~~i~~i~i~~~~~~~~~~~- 75 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMA-KEY-GFEYELVTYKWPRWLHKQTE- 75 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHH-HHh-CCceEEEEecChhhhhcccc-
Confidence 56764 4557899999999999999985 579999999999972 2233332 334 3467778776 232222111
Q ss_pred chhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCcccc
Q 018567 144 SIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLS 223 (354)
Q Consensus 144 ~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~ 223 (354)
..+ ...+|+|++++++||++++||||||+|+||.+||++||++||+ ++++||+++|.... ......+|......
T Consensus 76 ~~~----~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~-~~~~Aav~d~~~~~-~~~~~~~~~~~~~~ 149 (248)
T cd06432 76 KQR----IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLK-GAPYGYTPFCDSRK-EMDGFRFWKQGYWK 149 (248)
T ss_pred cch----hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcC-CCeEEEeeccccch-hcccchhhhhhhhh
Confidence 100 1246899999999998899999999999999999999999998 88999988875321 00000112111001
Q ss_pred cccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhc-cccCCCCCCccHHHHhhcCC-eEecCcccccCCCCCCcc
Q 018567 224 LTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQK-RMRIYELGSLPPFLLVFAGN-IAPVDHRWNQHGLGGDNY 301 (354)
Q Consensus 224 ~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~-~~~~~~~~DQd~LN~vf~~~-i~~L~~~wN~~~~~~~~~ 301 (354)
..+ ....|||||||||||++||+++++++++++++... ....+.++|||+||.++.++ ++.||.+||++..
T Consensus 150 ~~l--~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~----- 222 (248)
T cd06432 150 SHL--RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCET----- 222 (248)
T ss_pred hhc--CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHH-----
Confidence 111 13469999999999999999999998877765322 12224679999999999886 9999999998631
Q ss_pred ccccccCCCCCCEEEeccC
Q 018567 302 RGLCRDLHPGPVSLLHWSG 320 (354)
Q Consensus 302 ~~~~~~l~~~~~~IiHy~g 320 (354)
.|.+.....+.+|||..
T Consensus 223 --~~~~~~~~~~~~~~~~~ 239 (248)
T cd06432 223 --WCSDESKKKAKTIDLCN 239 (248)
T ss_pred --HhcccccCccceeeccc
Confidence 12222234678999986
No 19
>PLN00176 galactinol synthase
Probab=99.97 E-value=2e-30 Score=247.87 Aligned_cols=239 Identities=16% Similarity=0.193 Sum_probs=148.7
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchh
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
..-.++++|++|+.|+.++.+||.++.+. .++. .++++++++ +.++.|++..- .+..++.-...... ....
T Consensus 24 AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~-~~lV-vlVt~dVp~--e~r~~L~~~g~----~V~~V~~i~~~~~~-~~~~ 94 (333)
T PLN00176 24 AYVTFLAGNGDYVKGVVGLAKGLRKVKSA-YPLV-VAVLPDVPE--EHRRILVSQGC----IVREIEPVYPPENQ-TQFA 94 (333)
T ss_pred EEEEEEecCcchHHHHHHHHHHHHHhCCC-CCEE-EEECCCCCH--HHHHHHHHcCC----EEEEecccCCcccc-cccc
Confidence 34445678899999999999999998653 4443 345677776 45666654332 22222211000000 0000
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCC-----c-
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSN-----P- 220 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~-----~- 220 (354)
.. ....+|.||.++++.. ++||||||+|+||+++|++||+++. +. +||+.+|..+...-..+.+|-. +
T Consensus 95 ~~-~~~i~~tKl~iw~l~~--ydkvlyLDaD~lv~~nid~Lf~~~~--~~-~aAV~dc~~~~~~~~~p~~~~~~c~~~~~ 168 (333)
T PLN00176 95 MA-YYVINYSKLRIWEFVE--YSKMIYLDGDIQVFENIDHLFDLPD--GY-FYAVMDCFCEKTWSHTPQYKIGYCQQCPD 168 (333)
T ss_pred cc-hhhhhhhhhhhccccc--cceEEEecCCEEeecChHHHhcCCC--cc-eEEEecccccccccccccccccccccchh
Confidence 00 0124789999999874 8999999999999999999998842 44 5666666543110000111100 0
Q ss_pred ccc--cccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCcccccCCCCC
Q 018567 221 TLS--LTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGG 298 (354)
Q Consensus 221 ~~~--~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~~wN~~~~~~ 298 (354)
.+. .....+...||||||||+|++.|+.++ ++++++... . +.++|||+||.+|.++|++||.+||++....
T Consensus 169 ~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~----ll~~l~~~~--~-~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~ 241 (333)
T PLN00176 169 KVTWPAELGPPPPLYFNAGMFVFEPSLSTYED----LLETLKITP--P-TPFAEQDFLNMFFRDIYKPIPPVYNLVLAML 241 (333)
T ss_pred hccchhhccCCCCCeEEeEEEEEEcCHHHHHH----HHHHHHhcC--C-CCCCCHHHHHHHHcCcEEECCchhcCchhhh
Confidence 000 011112367999999999999998654 445555322 2 3579999999999999999999999873211
Q ss_pred CccccccccCCCCCCEEEeccC-CCCCCCCCCC
Q 018567 299 DNYRGLCRDLHPGPVSLLHWSG-KGKPWVRLDA 330 (354)
Q Consensus 299 ~~~~~~~~~l~~~~~~IiHy~g-~~KPW~~~~~ 330 (354)
...... ...++++||||+| ..|||+..+.
T Consensus 242 ~~~~~~---~~~~~vkIIHY~~~~~KPW~~~~~ 271 (333)
T PLN00176 242 WRHPEN---VELDKVKVVHYCAAGSKPWRYTGK 271 (333)
T ss_pred hhChhh---cccCCcEEEEeeCCCCCCCCCCCc
Confidence 111111 1135789999996 5799987653
No 20
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.97 E-value=1.7e-30 Score=240.43 Aligned_cols=212 Identities=19% Similarity=0.267 Sum_probs=143.9
Q ss_pred EEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEe-CCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcc
Q 018567 70 VAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVS-SDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSA 148 (354)
Q Consensus 70 I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~-~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~ 148 (354)
+.+++|++|+.++.|+++||++|++. +.++++. +++++ +.++.|++.... -+.+..++......... .
T Consensus 4 ~t~~~~~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~--~~~~~L~~~~~~-~~~v~~i~~~~~~~~~~-----~ 72 (240)
T cd02537 4 VTLLTNDDYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSE--ESREALEEVGWI-VREVEPIDPPDSANLLK-----R 72 (240)
T ss_pred EEEecChhHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCH--HHHHHHHHcCCE-EEecCccCCcchhhhcc-----c
Confidence 34667889999999999999999873 4555555 45775 445556543311 11122222111100000 1
Q ss_pred cCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCcccccccCC
Q 018567 149 LDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSG 228 (354)
Q Consensus 149 ~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~~ 228 (354)
.....+|.|++++++.+ ++||||||+|+||++||++||++ + +.++|+.+ +. |
T Consensus 73 ~~~~~~~~kl~~~~l~~--~drvlylD~D~~v~~~i~~Lf~~--~-~~~~a~~d-~~-----------~----------- 124 (240)
T cd02537 73 PRFKDTYTKLRLWNLTE--YDKVVFLDADTLVLRNIDELFDL--P-GEFAAAPD-CG-----------W----------- 124 (240)
T ss_pred hHHHHHhHHHHhccccc--cceEEEEeCCeeEccCHHHHhCC--C-Cceeeecc-cC-----------c-----------
Confidence 12235899999999753 89999999999999999999987 3 55555433 20 1
Q ss_pred CCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCC--eEecCcccccCCCCCCccccccc
Q 018567 229 RNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGN--IAPVDHRWNQHGLGGDNYRGLCR 306 (354)
Q Consensus 229 ~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~--i~~L~~~wN~~~~~~~~~~~~~~ 306 (354)
..|||||||++|++. +..+++++++.... . +.++||++||.+|.++ +..||.+||++......... +.
T Consensus 125 --~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~--~-~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~-~~ 194 (240)
T cd02537 125 --PDLFNSGVFVLKPSE----ETFNDLLDALQDTP--S-FDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPE-AL 194 (240)
T ss_pred --cccccceEEEEcCCH----HHHHHHHHHHhccC--C-CCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCch-hh
Confidence 369999999999964 45677777776432 2 5679999999999999 99999999997433221111 00
Q ss_pred cCCCCCCEEEeccCCCCCCCCCCCC
Q 018567 307 DLHPGPVSLLHWSGKGKPWVRLDAN 331 (354)
Q Consensus 307 ~l~~~~~~IiHy~g~~KPW~~~~~~ 331 (354)
...+.++||||+|+.|||+.....
T Consensus 195 -~~~~~~~iiHf~g~~KPW~~~~~~ 218 (240)
T cd02537 195 -WFGDEIKVVHFIGGDKPWSWWRDP 218 (240)
T ss_pred -cccCCcEEEEEeCCCCCCCCCcCC
Confidence 112467999999999999986654
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.92 E-value=1.7e-24 Score=202.70 Aligned_cols=214 Identities=15% Similarity=0.120 Sum_probs=141.0
Q ss_pred EEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch--HHHHHHHHhhCCCeeEEEEEcCCcccccccccchhc
Q 018567 70 VAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN--NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRS 147 (354)
Q Consensus 70 I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~--~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~ 147 (354)
|.++++..|+.++.++.+||.++.+. .+. +.+++++.+.. ....+... ......+.+..++.....+ . +
T Consensus 4 vtl~Tn~~YL~gAlvL~~sLr~~gs~-~dl-VvLvt~~~~~~~~~~~~~~~~-~l~~~~~~v~~v~~~~~~~--~---~- 74 (278)
T cd06914 4 VNYATNADYLCNALILFEQLRRLGSK-AKL-VLLVPETLLDRNLDDFVRRDL-LLARDKVIVKLIPVIIASG--G---D- 74 (278)
T ss_pred EEEecChhHHHHHHHHHHHHHHhCCC-CCE-EEEECCCCChhhhhhHHHHHH-HhhccCcEEEEcCcccCCC--C---C-
Confidence 34567899999999999999998873 333 23455565541 11111100 0111133344444221111 0 0
Q ss_pred ccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCcccccccC
Q 018567 148 ALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFS 227 (354)
Q Consensus 148 ~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~ 227 (354)
..+ ..+|.||.++++. .++||||||+|+||+++|++||+++.. ..+|||..
T Consensus 75 ~~~-~~~~tKl~~~~l~--~y~kvlyLDaD~l~~~~ideLf~~~~~--~~~Aap~~------------------------ 125 (278)
T cd06914 75 AYW-AKSLTKLRAFNQT--EYDRIIYFDSDSIIRHPMDELFFLPNY--IKFAAPRA------------------------ 125 (278)
T ss_pred ccH-HHHHHHHHhcccc--ceeeEEEecCChhhhcChHHHhcCCcc--cceeeecC------------------------
Confidence 111 2369999999984 399999999999999999999998733 33566541
Q ss_pred CCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCC-------eEecCcc-cccCCCCCC
Q 018567 228 GRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGN-------IAPVDHR-WNQHGLGGD 299 (354)
Q Consensus 228 ~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~-------i~~L~~~-wN~~~~~~~ 299 (354)
..||||||||||+++|+.+++.+++++.... +. ..+|||+||.+|.|+ +..||++ ||.......
T Consensus 126 ---~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~----~~-~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r 197 (278)
T cd06914 126 ---YWKFASHLMVIKPSKEAFKELMTEILPAYLN----KK-NEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFR 197 (278)
T ss_pred ---cceecceeEEEeCCHHHHHHHHHHHHHhccc----CC-CCCChHHHHHHHhCCccccCcceEEcCccccccCChhhc
Confidence 1289999999999999999888887766542 11 468999999999999 9999996 998642111
Q ss_pred c-----cccc----cccCC----CCCCEEEeccCC--CCCCCCCC
Q 018567 300 N-----YRGL----CRDLH----PGPVSLLHWSGK--GKPWVRLD 329 (354)
Q Consensus 300 ~-----~~~~----~~~l~----~~~~~IiHy~g~--~KPW~~~~ 329 (354)
. +.+. ..... -...++|||++. +|||....
T Consensus 198 ~~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~ 242 (278)
T cd06914 198 EKLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNN 242 (278)
T ss_pred ccCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcC
Confidence 1 1111 01110 135799999986 79999854
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1.3e-13 Score=146.03 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=167.6
Q ss_pred cCCCceEEE-EEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHH---HhhCCCeeEEEEEcCC---c
Q 018567 63 CSAEAIHVA-MTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETI---SHSFPSLSFQIYPFDD---T 135 (354)
Q Consensus 63 ~~~~~i~I~-~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l---~~~~p~~~~~~~~~d~---~ 135 (354)
.+.+.|||+ +++.+-|-+.+..+|.|+++|++. ++.|+++-+.+|+ .+++.+ ++.| +|++..+.- .
T Consensus 1177 ~~~~vINIFSvASGHLYERflrIMm~SvlknTkt--pVKFWfLkNyLSP--tFKe~iP~mA~eY---nFeyElv~YkWPr 1249 (1470)
T KOG1879|consen 1177 KDKEVINIFSVASGHLYERFLRIMMLSVLKNTKT--PVKFWFLKNYLSP--TFKESIPHMAKEY---NFEYELVQYKWPR 1249 (1470)
T ss_pred CccceEEEEeeccccHHHHHHHHHHHHHHhCCCC--ceeEEeehhhcCh--HHHHHHHHHHHHh---CceEEEEEecCch
Confidence 344579999 555577999999999999999984 5999999999998 444433 2333 333333332 2
Q ss_pred ccccccccchhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCC
Q 018567 136 AVSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPT 215 (354)
Q Consensus 136 ~~~~~is~~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~ 215 (354)
++... ....| ....|--||+.-+||.+++||||+|+|-||+.|+.||.++||+ |+..|=+..|...- +.-...
T Consensus 1250 WLhqQ-~EKQR----iiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~-GaPygYtPfCdsR~-EMDGyR 1322 (1470)
T KOG1879|consen 1250 WLHQQ-TEKQR----IIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLG-GAPYGYTPFCDSRR-EMDGYR 1322 (1470)
T ss_pred hhhhh-hhhhh----hhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccC-CCccccCccccccc-cccchh
Confidence 22211 11111 1356888899999999999999999999999999999999999 88888777775321 111123
Q ss_pred CCCCcccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHh-cc-ccCCCCCCccHHHHh-hcCCeEecCcccc
Q 018567 216 FWSNPTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQ-KR-MRIYELGSLPPFLLV-FAGNIAPVDHRWN 292 (354)
Q Consensus 216 ~w~~~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~-~~-~~~~~~~DQd~LN~v-f~~~i~~L~~~wN 292 (354)
||+...++..+ ++..|-=|...|+||+|.|+..-..++.-..+.- .+ +.+ .--|||+-|.+ ..-.|+-||..|=
T Consensus 1323 FWK~GYW~~hL--~grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSL-sNLDQDLPNnm~hqVpIkSLPqeWL 1399 (1470)
T KOG1879|consen 1323 FWKQGYWKKHL--RGRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSL-SNLDQDLPNNMQHQVPIKSLPQEWL 1399 (1470)
T ss_pred HHhhhHHHHHh--ccCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchh-hhccccccccceeecccccCCcchh
Confidence 56554333333 3468999999999999999998888876544422 22 333 34578876655 4557999999976
Q ss_pred cCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCC----CCCCCCchhccccccc
Q 018567 293 QHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLD----ANRPCPLDALWAPYDL 345 (354)
Q Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~----~~~~~~~~~lW~~Y~~ 345 (354)
+...+ |.+.....+++|--+.. ||-..- +.| .-..|..|+.
T Consensus 1400 WCETW-------C~d~skkkAktIDLCnN--P~TKEpKL~~A~R---iv~EW~dyD~ 1444 (1470)
T KOG1879|consen 1400 WCETW-------CDDESKKKAKTIDLCNN--PLTKEPKLDAARR---IVSEWTDYDA 1444 (1470)
T ss_pred hhhhh-------cCchhhhhchhhhhhcC--ccccchhhHHHhh---hcCCCcccch
Confidence 64321 11111234567777643 665531 112 4456777764
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.93 E-value=2.5e-10 Score=105.97 Aligned_cols=167 Identities=23% Similarity=0.327 Sum_probs=100.6
Q ss_pred chhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccc--cCcccccCCC---------------
Q 018567 153 LNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCN--ANFTSYFTPT--------------- 215 (354)
Q Consensus 153 ~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~--~~~~~y~~~~--------------- 215 (354)
.++.|+.+.+... +|||||||+|.||++++++||+.+. ....|+++... +.|++--.+.
T Consensus 155 ~mftKLrVfeqtE--yDRvifLDsDaivlknmDklFd~Pv--yef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r 230 (368)
T COG5597 155 DMFTKLRVFEQTE--YDRVIFLDSDAIVLKNMDKLFDYPV--YEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMR 230 (368)
T ss_pred HHhHHHHhhhhhh--hceEEEeccchHHhhhhHHHhcchh--hhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccH
Confidence 5788999988884 8999999999999999999998652 23334443110 0111111111
Q ss_pred --------CCCC--cccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCC---CCCccHHHHhhcC
Q 018567 216 --------FWSN--PTLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYE---LGSLPPFLLVFAG 282 (354)
Q Consensus 216 --------~w~~--~~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~---~~DQd~LN~vf~~ 282 (354)
+|.+ +.........-..+||||.||++..++.-.. +...+ . ..+|+ .-.|.++|+.++.
T Consensus 231 ~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~r----iv~~a--l--Pklydda~mmeqsllnlaYn~ 302 (368)
T COG5597 231 AALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLR----IVWFA--L--PKLYDDADMMEQSLLNLAYNY 302 (368)
T ss_pred hhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHH----HHHHh--h--HHhhhhhhHHHHHHHHHHHhh
Confidence 1211 1111111122367899999999999875432 22222 1 23442 2256677877433
Q ss_pred ----CeEecCcccccCCCCCCccccccccCCCCCCEEEeccCCCCCCCCCCCCCCCCchhcccccc
Q 018567 283 ----NIAPVDHRWNQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYD 344 (354)
Q Consensus 283 ----~i~~L~~~wN~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~ 344 (354)
-|..++.+|| |.. ... .++ | -.+.+|+ |||...+...||.....|++=.
T Consensus 303 ~g~FPwerld~~yN--G~w--a~~---ndl-P-ylka~Hg----K~W~y~g~~fp~i~~~ew~~da 355 (368)
T COG5597 303 EGFFPWERLDPRYN--GYW--ADA---NDL-P-YLKAWHG----KPWFYTGEQFPDIAGLEWPQDA 355 (368)
T ss_pred hccCchhhcCcccc--ccc--ccc---ccc-c-hHHHhhc----CcCCCCcccChhhhcCcChhhh
Confidence 5788888988 221 110 011 1 2345564 9999999999999999999533
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.32 E-value=0.0013 Score=59.36 Aligned_cols=139 Identities=16% Similarity=0.108 Sum_probs=74.9
Q ss_pred hhHHH-hhhhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCcccccccCCCCCc
Q 018567 154 NYARN-YLANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNAC 232 (354)
Q Consensus 154 ~y~Rl-~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~~~~~~ 232 (354)
...|. ++-++|...+ -|+|+|+|++.++|..++++. .+..++... ++.... .. .....
T Consensus 52 ~~~K~~~~~~~L~~G~-~vl~~D~Dvv~~~dp~~~~~~--~~~Di~~~~-d~~~~~------------~~-----~~~~~ 110 (212)
T PF03407_consen 52 TWLKPKVLLDLLELGY-DVLFSDADVVWLRDPLPYFEN--PDADILFSS-DGWDGT------------NS-----DRNGN 110 (212)
T ss_pred HHHHHHHHHHHHHcCC-ceEEecCCEEEecCcHHhhcc--CCCceEEec-CCCccc------------ch-----hhcCC
Confidence 34444 3456676644 599999999999999999922 213344433 332110 00 01234
Q ss_pred cceeeeEEEechHHhhhchHHH-HHHHHHHhccccCCCCCCccHHHHhhcCC--------eEecCcccccCCCCCCcccc
Q 018567 233 YFNTGVMVIDLERWRKGDYTRK-IVEWMELQKRMRIYELGSLPPFLLVFAGN--------IAPVDHRWNQHGLGGDNYRG 303 (354)
Q Consensus 233 yFNsGVmlinl~~wR~~~~~~~-~~~~~~~~~~~~~~~~~DQd~LN~vf~~~--------i~~L~~~wN~~~~~~~~~~~ 303 (354)
.+|+|+|.+.-.. -+.+ +.+|++..... -...||.+||.++... +..||...-..+.++-....
T Consensus 111 ~~n~G~~~~r~t~-----~~~~~~~~w~~~~~~~--~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~ 183 (212)
T PF03407_consen 111 LVNTGFYYFRPTP-----RTIAFLEDWLERMAES--PGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSR 183 (212)
T ss_pred ccccceEEEecCH-----HHHHHHHHHHHHHHhC--CCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecc
Confidence 4699999996543 2223 34455533222 1235999999987663 55666644322222110000
Q ss_pred ccccCC-CCCCEEEeccC
Q 018567 304 LCRDLH-PGPVSLLHWSG 320 (354)
Q Consensus 304 ~~~~l~-~~~~~IiHy~g 320 (354)
...... ..++.++|.++
T Consensus 184 ~~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 184 DWAWVPTKNKPYIVHANC 201 (212)
T ss_pred hhhhhccccccceEEEcC
Confidence 111111 13678999985
No 25
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=97.05 E-value=0.0023 Score=60.47 Aligned_cols=110 Identities=16% Similarity=0.179 Sum_probs=64.1
Q ss_pred EEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEe-CCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcc
Q 018567 70 VAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVS-SDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSA 148 (354)
Q Consensus 70 I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~-~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~ 148 (354)
||++.-+.|+..+..+|..|.+... .-+|.+..-. ++.++ ...+.+.. .+ ++.++....-.........+.+
T Consensus 4 IVi~~g~~~~~~a~~lI~~LR~~g~-~LPIEI~~~~~~dl~~--~~~~~l~~-~q--~v~~vd~~~~~~~~~~~~~~~~- 76 (271)
T PF11051_consen 4 IVITAGDKYLWLALRLIRVLRRLGN-TLPIEIIYPGDDDLSK--EFCEKLLP-DQ--DVWFVDASCVIDPDYLGKSFSK- 76 (271)
T ss_pred EEEEecCccHHHHHHHHHHHHHhCC-CCCEEEEeCCccccCH--HHHHHHhh-hh--hhheecceEEeecccccccccc-
Confidence 7888888999999999999988544 4567654443 34444 34444432 11 1222211111111111111100
Q ss_pred cCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccC
Q 018567 149 LDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATP 191 (354)
Q Consensus 149 ~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~d 191 (354)
..|..=.++-++. ..+.||+||+|.|.+.|++.||+.+
T Consensus 77 ----~~~~~K~lA~l~s-sFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 77 ----KGFQNKWLALLFS-SFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred ----CCchhhhhhhhhC-CcceEEEEcCCcccccCHHHHhcCc
Confidence 0343334555665 5999999999999999999999874
No 26
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=96.31 E-value=0.013 Score=57.53 Aligned_cols=139 Identities=22% Similarity=0.362 Sum_probs=76.4
Q ss_pred cCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecccccCcccccCCCCCCCcccccccCCCCCccceeeeEEEec
Q 018567 164 LPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMVIDL 243 (354)
Q Consensus 164 lp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinl 243 (354)
.|+ ++-+-|||+|+||.+-- ++++++ .+ ++.+...+. |.. ..+..++-...|+||++|..
T Consensus 195 ~Pe-aEWiWWLDsDALImNms---felPle-ry-----~~~NlVihg------~~~----~l~~~kdW~GLNtGsFLIRN 254 (429)
T PLN03182 195 HPE-VEWIWWMDSDALFTDMT---FEIPLE-KY-----EGYNLVIHG------WDE----LVYDQKSWIGLNTGSFLIRN 254 (429)
T ss_pred CCC-ceEEEEecCCceeecCC---CCCCHh-Hc-----CCcCeeecc------chh----hheeccccCccceeeEEEEc
Confidence 575 99999999999999731 223332 00 000000000 111 11112345689999999987
Q ss_pred hHHhhhchHHHHH-HHHHH-----------------hccccCCCCCCccHHHHhh------cCCeEecCcccccCCCCCC
Q 018567 244 ERWRKGDYTRKIV-EWMEL-----------------QKRMRIYELGSLPPFLLVF------AGNIAPVDHRWNQHGLGGD 299 (354)
Q Consensus 244 ~~wR~~~~~~~~~-~~~~~-----------------~~~~~~~~~~DQd~LN~vf------~~~i~~L~~~wN~~~~~~~ 299 (354)
-.|-.. ++ .|... -+....++..||.+|-+++ .+.-.+|...|-.++...
T Consensus 255 cqWSld-----lLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~Gyw~- 328 (429)
T PLN03182 255 CQWSLD-----LLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHGYWV- 328 (429)
T ss_pred CHHHHH-----HHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceeccccH-
Confidence 777532 22 12211 1123345789999887765 223467888888876431
Q ss_pred cccccc----ccCCC-----CCCEEEeccCCCCCCCCCC
Q 018567 300 NYRGLC----RDLHP-----GPVSLLHWSGKGKPWVRLD 329 (354)
Q Consensus 300 ~~~~~~----~~l~~-----~~~~IiHy~g~~KPW~~~~ 329 (354)
.+.+.. ..-++ .-+.|.||+| .||.....
T Consensus 329 ~iv~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~~ 366 (429)
T PLN03182 329 GLVDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGYG 366 (429)
T ss_pred HHHHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCCC
Confidence 111111 01112 1358999999 89997643
No 27
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=94.75 E-value=0.019 Score=53.24 Aligned_cols=151 Identities=20% Similarity=0.264 Sum_probs=17.1
Q ss_pred hhHHHh-hhhhc---CCCCCeEEEEeccEEEecChHhhhcc-----CCCCCcEE-E---eecccccCcccccCCCCCCCc
Q 018567 154 NYARNY-LANLL---PPCVHKVVYLDSDLVLVDDISKLAAT-----PLEDHAVL-A---APEYCNANFTSYFTPTFWSNP 220 (354)
Q Consensus 154 ~y~Rl~-l~~ll---p~~v~RvLYLDsD~IV~~DI~~L~~~-----dl~~~~~~-a---a~e~~~~~~~~y~~~~~w~~~ 220 (354)
+..|+. +-+.+ |+ ++-|.|||+|++|.+.=-+|.+. .|+ ..+. . .+.. +..+... ...+
T Consensus 60 ~W~K~~~lr~~m~~~P~-~~wv~~lD~Dali~n~~~~L~~~il~p~~L~-~~~~r~~~~~p~~---~~~~~~~---~~~~ 131 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYPE-AEWVWWLDSDALIMNPDFSLEEHILSPSRLD-SLLLRDVPIVPPD---SIIKTYS---VIDG 131 (239)
T ss_dssp HHTHHHHHHHHHHH-TT--SEEEEE-TTEEE-------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCCC-CCEEEEEcCCeEEEecccccccccccccccc-ccccccccccccc---ccccccc---cccc
Confidence 455543 33344 85 99999999999999854444332 121 1110 0 1111 0000000 0000
Q ss_pred ccccccCCCCCccceeeeEEEechHHhhhchHHHHHHHHHHhc-cccC---CCCCCccHHHHhhc------CCeEecCcc
Q 018567 221 TLSLTFSGRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQK-RMRI---YELGSLPPFLLVFA------GNIAPVDHR 290 (354)
Q Consensus 221 ~~~~~~~~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~-~~~~---~~~~DQd~LN~vf~------~~i~~L~~~ 290 (354)
.-...+...+..++|+||+++-...|- ..+++.+.... ...- ....+|.+|-.++. +++..+|.+
T Consensus 132 ~~~~li~t~d~~gLNtGsFliRns~ws-----~~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~ 206 (239)
T PF05637_consen 132 NDIHLIITQDWNGLNTGSFLIRNSPWS-----RDFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQR 206 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 000111234578899999999666654 34443322110 1111 13578998876543 345566653
Q ss_pred c-ccCCCCCCccccccccCCCCCCEEEeccCCCCC
Q 018567 291 W-NQHGLGGDNYRGLCRDLHPGPVSLLHWSGKGKP 324 (354)
Q Consensus 291 w-N~~~~~~~~~~~~~~~l~~~~~~IiHy~g~~KP 324 (354)
| |....+... .....++ -|+||+| .|+
T Consensus 207 ~~nsy~~~~~~-----~~~~~GD-fvvhfaG-C~~ 234 (239)
T PF05637_consen 207 WFNSYPEDECN-----YQYKEGD-FVVHFAG-CKV 234 (239)
T ss_dssp -----------------------------------
T ss_pred ccccccccccc-----ccccccc-ccccccc-ccc
Confidence 3 322111001 1122333 7999999 443
No 28
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=93.98 E-value=4.6 Score=37.96 Aligned_cols=201 Identities=13% Similarity=0.110 Sum_probs=110.1
Q ss_pred CceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccch
Q 018567 66 EAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 66 ~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
-+|-|++.+-..|.....--+.|.-+|=-...+++++|++|.-+. +. .+ +.-|.-++++..+..+ ..+.
T Consensus 34 ~tIgl~vfatGkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~---~p-~v-~lg~~r~~~V~~v~~~---~~W~--- 102 (271)
T cd02515 34 ITIGLTVFAVGKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAA---VP-EV-ELGPGRRLTVLKIAEE---SRWQ--- 102 (271)
T ss_pred CEEEEEEEEeccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCccc---Cc-cc-ccCCCceeEEEEeccc---cCCc---
Confidence 356677667788998888888898888765577999999996442 00 01 1123335666665322 1111
Q ss_pred hcccCCcchhHHHh-----hhhhcCCCCCeEEEEeccEEEecChH-hhhccCCCCCcEEEeecc--cccCcccccCCCCC
Q 018567 146 RSALDCPLNYARNY-----LANLLPPCVHKVVYLDSDLVLVDDIS-KLAATPLEDHAVLAAPEY--CNANFTSYFTPTFW 217 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~-----l~~llp~~v~RvLYLDsD~IV~~DI~-~L~~~dl~~~~~~aa~e~--~~~~~~~y~~~~~w 217 (354)
-.++.|+- +.+..-.++|-+.++|+|+++.+++. |. | |.++|+... ...+- .-|+ +
T Consensus 103 ------~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~----L--g~lva~lHp~~y~~~~-~~fp---Y 166 (271)
T cd02515 103 ------DISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVET----L--GDSVAQLHPWWYGKPR-KQFP---Y 166 (271)
T ss_pred ------HHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHH----h--hhhheecChhhhcCCC-CCCC---C
Confidence 12444542 22333335999999999999999997 22 2 234555221 11000 0010 1
Q ss_pred CCcccccccC--CCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccC-CCCCCccHHHHhhcCC--eEecCcccc
Q 018567 218 SNPTLSLTFS--GRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRI-YELGSLPPFLLVFAGN--IAPVDHRWN 292 (354)
Q Consensus 218 ~~~~~~~~~~--~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~-~~~~DQd~LN~vf~~~--i~~L~~~wN 292 (354)
..+..+..+. +.+.-|+-+||.==-.+... ++++.|.+.+..-..+.+ --..|..-||..|-.+ .+.|++.|+
T Consensus 167 ERrp~S~AyIp~~eGdfYy~Ga~~GG~~~~vl--~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~ 244 (271)
T cd02515 167 ERRPSSAAYIPEGEGDFYYHGAVFGGSVEEVY--RLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYL 244 (271)
T ss_pred cCCCCccccccCCCCCeEEeeeecCccHHHHH--HHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhc
Confidence 1111111221 34566776776533333222 245555554443222222 1237888899886543 799999999
Q ss_pred cCC
Q 018567 293 QHG 295 (354)
Q Consensus 293 ~~~ 295 (354)
...
T Consensus 245 w~e 247 (271)
T cd02515 245 WDD 247 (271)
T ss_pred CCc
Confidence 863
No 29
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=90.51 E-value=0.32 Score=47.97 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=54.3
Q ss_pred CCccceeeeEEEechHHhhhchHHHHHHHHHHhccccCCCCCCccHHHHhhcCCeEecCcccccCC-CCCCccc-ccccc
Q 018567 230 NACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHG-LGGDNYR-GLCRD 307 (354)
Q Consensus 230 ~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~LN~vf~~~i~~L~~~wN~~~-~~~~~~~-~~~~~ 307 (354)
....||+|.|++-..-. .+..++.......-+.+++|+++|.+|...-...|..+|... .....-. .....
T Consensus 196 l~~~~n~~~~v~~ps~~-------~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~ 268 (369)
T KOG1950|consen 196 LPLIFNSGLLVFEPSLC-------NYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSR 268 (369)
T ss_pred ccceeccCccccCCCcc-------chhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhh
Confidence 35669999999855432 222244433223346789999999999876668888888652 1111100 00001
Q ss_pred CCCCCCEEEeccCCCCCCCCCCC
Q 018567 308 LHPGPVSLLHWSGKGKPWVRLDA 330 (354)
Q Consensus 308 l~~~~~~IiHy~g~~KPW~~~~~ 330 (354)
........+||.|..|||.....
T Consensus 269 ~~~~~~~~~~y~~~~~p~~~~~~ 291 (369)
T KOG1950|consen 269 ASSVLRYALHYLGANKPELCYRD 291 (369)
T ss_pred cccccchhhhccccCCCCccccC
Confidence 11122345699997788876543
No 30
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=89.27 E-value=0.49 Score=46.33 Aligned_cols=19 Identities=37% Similarity=0.781 Sum_probs=17.0
Q ss_pred EEEeccEEEecChHhhhcc
Q 018567 172 VYLDSDLVLVDDISKLAAT 190 (354)
Q Consensus 172 LYLDsD~IV~~DI~~L~~~ 190 (354)
||||+|+||++++..|-+.
T Consensus 242 vYLDTDvIvLksl~~l~N~ 260 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNV 260 (409)
T ss_pred EEeeccEEEeccccccccc
Confidence 8999999999999987754
No 31
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=88.14 E-value=22 Score=34.52 Aligned_cols=199 Identities=12% Similarity=0.125 Sum_probs=97.9
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchh
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
+|-+++.+-..|...+.--+.|.-+|=-...+++++|++|..+. +- .+ ..-|.-++++..+... ..+..
T Consensus 100 tIGL~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~---vP-~i-~l~~~r~~~V~~v~~~---~~Wqd--- 168 (337)
T PF03414_consen 100 TIGLTVFATGKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSK---VP-RI-ELGPGRRLKVFEVQEE---KRWQD--- 168 (337)
T ss_dssp EEEEEEEE-CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGG---S--------TTEEEEEEE-SGG---SSHHH---
T ss_pred eEEEEEEecccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhh---CC-cc-ccCCCceeEEEEeccc---CCCcc---
Confidence 35555555678888888888888887655577889999987543 10 01 0122334555554321 11111
Q ss_pred cccCCcchhHHHh-----h-hhhcCCCCCeEEEEeccEEEecChHhhhccCCCCCcEEEeecc--cccCcccccCCCCCC
Q 018567 147 SALDCPLNYARNY-----L-ANLLPPCVHKVVYLDSDLVLVDDISKLAATPLEDHAVLAAPEY--CNANFTSYFTPTFWS 218 (354)
Q Consensus 147 ~~~~~~~~y~Rl~-----l-~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~~~aa~e~--~~~~~~~y~~~~~w~ 218 (354)
.++.|+- + ..++. ++|=+..+|+|+++.+++.. ++ | |..+|+... ...+- +-|+ +.
T Consensus 169 ------~sm~Rm~~i~~~i~~~~~~-EvDYLFc~dvd~~F~~~vGv--E~-L--g~lva~LHp~~y~~~~-~~Fp---YE 232 (337)
T PF03414_consen 169 ------ISMMRMEMISEHIEQHIQH-EVDYLFCMDVDMVFQDHVGV--EI-L--GDLVATLHPWFYFKPR-ESFP---YE 232 (337)
T ss_dssp ------HHHHHHHHHHHHHHHCHHH-H-SEEEEEESSEEE-S-B-G--GG----SSEEEEESTTTTTSTG-GGS-----B
T ss_pred ------chhHHHHHHHHHHHHHHhh-cCCEEEEEecceEEecccCH--HH-H--HHHHHHhCHHHHCCCh-hhCc---cc
Confidence 1333432 2 23444 49999999999999999874 11 2 456776432 11110 0111 11
Q ss_pred CcccccccC--CCCCccceeeeEEEechHHhhhchHHHHHHHHHHhccccC-CCCCCccHHHHhh--cCCeEecCccccc
Q 018567 219 NPTLSLTFS--GRNACYFNTGVMVIDLERWRKGDYTRKIVEWMELQKRMRI-YELGSLPPFLLVF--AGNIAPVDHRWNQ 293 (354)
Q Consensus 219 ~~~~~~~~~--~~~~~yFNsGVmlinl~~wR~~~~~~~~~~~~~~~~~~~~-~~~~DQd~LN~vf--~~~i~~L~~~wN~ 293 (354)
.+..+..+. +.+..|+-+|+.==-..... ++++.|..-|..-..+.+ --..|.--||..| +...+.|++.|+.
T Consensus 233 Rrp~S~AyIp~~eGDfYY~ga~fGGt~~~vl--~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KPtKvLSPEY~W 310 (337)
T PF03414_consen 233 RRPKSQAYIPYGEGDFYYHGAFFGGTVEEVL--RLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKPTKVLSPEYCW 310 (337)
T ss_dssp -STTSTTB--TT--S--EECCEEEECHHHHH--HHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS--SEEE-GGGSB
T ss_pred cCccccccccCCCCCeEEeceecCCcHHHHH--HHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCCceecCHHHcc
Confidence 111112221 34567777777654444433 355666555543222222 1237788899876 3448899999987
Q ss_pred C
Q 018567 294 H 294 (354)
Q Consensus 294 ~ 294 (354)
.
T Consensus 311 d 311 (337)
T PF03414_consen 311 D 311 (337)
T ss_dssp S
T ss_pred C
Confidence 5
No 32
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=83.86 E-value=11 Score=30.78 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=52.9
Q ss_pred hhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhC-CCeeEEEEEcCCcccccccccchhcccCCcchhHH
Q 018567 79 LRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSF-PSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYAR 157 (354)
Q Consensus 79 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~-p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~R 157 (354)
...+.-++.|+++... ....+.|+.++.++ ...+.+++.. ...+++++..+.+. + ...++
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~eiivvdd~s~d--~~~~~~~~~~~~~~~i~~i~~~~n~--g-------------~~~~~ 70 (169)
T PF00535_consen 10 AEYLERTLESLLKQTD--PDFEIIVVDDGSTD--ETEEILEEYAESDPNIRYIRNPENL--G-------------FSAAR 70 (169)
T ss_dssp TTTHHHHHHHHHHHSG--CEEEEEEEECS-SS--SHHHHHHHHHCCSTTEEEEEHCCCS--H-------------HHHHH
T ss_pred HHHHHHHHHHHhhccC--CCEEEEEecccccc--ccccccccccccccccccccccccc--c-------------ccccc
Confidence 5666778888888843 46778777777644 2233333221 13355555543221 1 13444
Q ss_pred HhhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 158 NYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 158 l~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
....+.... +-++++|+|.++..+ |.+|.+.
T Consensus 71 n~~~~~a~~--~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 71 NRGIKHAKG--EYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp HHHHHH--S--SEEEEEETTEEE-TTHHHHHHHH
T ss_pred cccccccce--eEEEEeCCCceEcHHHHHHHHHH
Confidence 555555543 699999999999998 7777765
No 33
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=75.96 E-value=38 Score=30.43 Aligned_cols=103 Identities=16% Similarity=0.129 Sum_probs=56.3
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchh
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
.+-|++.+= |-...+..++.|+++....+..+.+.|+.++.++ ...+.+++ +...+++++..+.+ .+
T Consensus 30 ~isVvip~~-n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d--~t~~~~~~-~~~~~v~~i~~~~~--~g------- 96 (251)
T cd06439 30 TVTIIIPAY-NEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTD--GTAEIARE-YADKGVKLLRFPER--RG------- 96 (251)
T ss_pred EEEEEEecC-CcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCc--cHHHHHHH-HhhCcEEEEEcCCC--CC-------
Confidence 466666653 3346677889999876543333677777776654 22222322 21113444432211 01
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
...++...-+... -|-|+++|+|+++..+ +.+|++.
T Consensus 97 ------~~~a~n~gi~~a~--~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 97 ------KAAALNRALALAT--GEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred ------hHHHHHHHHHHcC--CCEEEEEccccCcCHHHHHHHHHH
Confidence 1233333333333 3889999999999876 6666654
No 34
>PLN03181 glycosyltransferase; Provisional
Probab=74.83 E-value=11 Score=37.75 Aligned_cols=105 Identities=22% Similarity=0.388 Sum_probs=57.9
Q ss_pred cCCCCCeEEEEeccEEEecChHhhhccCCC---CCcEEEeecccccCcccccCCCCCCCcccccccCCCCCccceeeeEE
Q 018567 164 LPPCVHKVVYLDSDLVLVDDISKLAATPLE---DHAVLAAPEYCNANFTSYFTPTFWSNPTLSLTFSGRNACYFNTGVMV 240 (354)
Q Consensus 164 lp~~v~RvLYLDsD~IV~~DI~~L~~~dl~---~~~~~aa~e~~~~~~~~y~~~~~w~~~~~~~~~~~~~~~yFNsGVml 240 (354)
+|+ .+-+-|||+|+||.+.=-+ +++. +..++ +. .|.+. .+..++-..+|+||++
T Consensus 196 ~Pe-AEWfWWLDsDALIMNp~~s---LPl~ry~~~NLv--vh-------------g~p~~----vy~~qdw~GlN~GsFL 252 (453)
T PLN03181 196 HPE-AEWIWWVDSDAVFTDMDFK---LPLHRYRDHNLV--VH-------------GWPKL----IYEKRSWTALNAGVFL 252 (453)
T ss_pred CCC-ceEEEEecCCceeecCCCC---CCHhhcCCcccc--cc-------------CCccc----ccccccccccceeeeE
Confidence 785 9999999999999976211 1221 00000 00 01100 1111234679999999
Q ss_pred EechHHhhhchHHHHH-HHHH-------------H----hccccCCCCCCccHHHHhhc------CCeEecCcccccCCC
Q 018567 241 IDLERWRKGDYTRKIV-EWME-------------L----QKRMRIYELGSLPPFLLVFA------GNIAPVDHRWNQHGL 296 (354)
Q Consensus 241 inl~~wR~~~~~~~~~-~~~~-------------~----~~~~~~~~~~DQd~LN~vf~------~~i~~L~~~wN~~~~ 296 (354)
|-...|-. .++ .|.. . .++...++-.||..|-+++. +.-.+|...|-.++.
T Consensus 253 IRNcqWSl-----~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~Gy 327 (453)
T PLN03181 253 IRNCQWSL-----DFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFEGY 327 (453)
T ss_pred EecCHHHH-----HHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeeeee
Confidence 97766643 222 1221 1 12233456789998765532 234678888887754
No 35
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=72.92 E-value=39 Score=36.34 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=58.6
Q ss_pred CceEEEEEeCccch----hchHHHHHHHHHhcCCCCcEEEEEEeCCCCchH-H----HHHHHHhhCCCeeEEEEEcCCcc
Q 018567 66 EAIHVAMTLDAPYL----RGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANN-L----LHETISHSFPSLSFQIYPFDDTA 136 (354)
Q Consensus 66 ~~i~I~~~~D~~yl----~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~-~----l~~~l~~~~p~~~~~~~~~d~~~ 136 (354)
..+-|++.+=+.-. ..+.+++.|+...+. +.+++|+++.|+.+++. . ..+.+.+.++. ..+++......
T Consensus 124 ~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~-~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~-~~~i~yr~R~~ 201 (691)
T PRK05454 124 ARTAILMPIYNEDPARVFAGLRAMYESLAATGH-GAHFDFFILSDTRDPDIAAAEEAAWLELRAELGG-EGRIFYRRRRR 201 (691)
T ss_pred CceEEEEeCCCCChHHHHHHHHHHHHHHHhcCC-CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCcEEEEECCc
Confidence 35667766543322 346677778887654 35799999998877631 1 11234444532 22233221110
Q ss_pred cccccccchhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 137 VSGLISTSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 137 ~~~~is~~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
=.+ +| -.+...+.|.. ...+|-++.||+|+++.+| +..|..
T Consensus 202 n~~------~K-aGNl~~~~~~~-----~~~~eyivvLDADs~m~~d~L~~lv~ 243 (691)
T PRK05454 202 NVG------RK-AGNIADFCRRW-----GGAYDYMVVLDADSLMSGDTLVRLVR 243 (691)
T ss_pred CCC------cc-HHHHHHHHHhc-----CCCcCEEEEEcCCCCCCHHHHHHHHH
Confidence 001 11 01111233322 1248999999999999998 445554
No 36
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=70.06 E-value=9.8 Score=36.52 Aligned_cols=48 Identities=19% Similarity=0.231 Sum_probs=38.7
Q ss_pred hHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhccCC-CCCcEEEeecc
Q 018567 155 YARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAATPL-EDHAVLAAPEY 203 (354)
Q Consensus 155 y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~~dl-~~~~~~aa~e~ 203 (354)
+.|++...+||+ ++--||+|+-+.+++|+..|.+.=+ .++.-+|+..+
T Consensus 141 ~~K~lpHrlfp~-y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H 189 (305)
T PF04765_consen 141 IPKLLPHRLFPN-YDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKH 189 (305)
T ss_pred ccceeccccCCC-CceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCC
Confidence 778899999996 9999999999999999988776533 23566777543
No 37
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=69.28 E-value=58 Score=28.60 Aligned_cols=99 Identities=12% Similarity=0.016 Sum_probs=48.5
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchhc
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRS 147 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~ 147 (354)
|-|++.+=+.-...+..++.|++...-.++.+.+.|+.++.++ ...+.+++......++++..+.+. + ..
T Consensus 3 vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d--~t~~~~~~~~~~~~~~~~~~~~~~--~-~~----- 72 (234)
T cd06421 3 VDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRP--ELRALAAELGVEYGYRYLTRPDNR--H-AK----- 72 (234)
T ss_pred eEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCch--hHHHHHHHhhcccCceEEEeCCCC--C-Cc-----
Confidence 4455554332234456789999875543233677676666544 344444432221122222221110 0 00
Q ss_pred ccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecCh
Q 018567 148 ALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDI 184 (354)
Q Consensus 148 ~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI 184 (354)
...+...-+.. ..+-|+++|+|.++-.|-
T Consensus 73 ------~~~~n~~~~~a--~~d~i~~lD~D~~~~~~~ 101 (234)
T cd06421 73 ------AGNLNNALAHT--TGDFVAILDADHVPTPDF 101 (234)
T ss_pred ------HHHHHHHHHhC--CCCEEEEEccccCcCccH
Confidence 01111111222 379999999999997653
No 38
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=69.07 E-value=42 Score=33.74 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=57.1
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccch
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
.+-|++.+=+ -...+..++.|+++.+-.+..+.+.|+.++..++ .+..+.+++.++.+. +...+.+ .++
T Consensus 50 ~vsVIIP~yN-e~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~--v~~~~~~--~Gk----- 119 (439)
T TIGR03111 50 DITIIIPVYN-SEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLS--LRYMNSD--QGK----- 119 (439)
T ss_pred CEEEEEEeCC-ChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeE--EEEeCCC--CCH-----
Confidence 4677776643 3467788999998765433457777777766552 222233444566533 3333322 111
Q ss_pred hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 146 RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
+.++-..-+... -+=|+.+|+|.++..| +.++.+
T Consensus 120 --------a~AlN~gl~~s~--g~~v~~~DaD~~~~~d~L~~l~~ 154 (439)
T TIGR03111 120 --------AKALNAAIYNSI--GKYIIHIDSDGKLHKDAIKNMVT 154 (439)
T ss_pred --------HHHHHHHHHHcc--CCEEEEECCCCCcChHHHHHHHH
Confidence 222222222333 3569999999999765 444443
No 39
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=66.83 E-value=30 Score=29.40 Aligned_cols=68 Identities=9% Similarity=0.096 Sum_probs=47.8
Q ss_pred CCCceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccc
Q 018567 64 SAEAIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVS 138 (354)
Q Consensus 64 ~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~ 138 (354)
..+.+-+|.++.+++...+.-++.||.++.+. . .+.+..-|+++ ...+.|++.++ ++++..||.+...
T Consensus 58 n~~~vvfVSa~S~~h~~~~~~~i~si~~~~P~-~--k~ilY~LgL~~--~~i~~L~~~~~--n~evr~Fn~s~YP 125 (142)
T PF07801_consen 58 NSSDVVFVSATSDNHFNESMKSISSIRKFYPN-H--KIILYDLGLSE--EQIKKLKKNFC--NVEVRKFNFSKYP 125 (142)
T ss_pred cCCccEEEEEecchHHHHHHHHHHHHHHHCCC-C--cEEEEeCCCCH--HHHHHHHhcCC--ceEEEECCCccCc
Confidence 44567788888899999999999999999984 3 34456668886 33445554455 4666777765443
No 40
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=66.72 E-value=48 Score=26.81 Aligned_cols=87 Identities=20% Similarity=0.119 Sum_probs=45.9
Q ss_pred hchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCC--eeEEEEEcCCcccccccccchhcccCCcchhHH
Q 018567 80 RGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPS--LSFQIYPFDDTAVSGLISTSIRSALDCPLNYAR 157 (354)
Q Consensus 80 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~--~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~R 157 (354)
..+..++.|++.... .+..+.|+.++.+++ ..+.+.+.... ..+.+.. .... .+ ...+|
T Consensus 10 ~~l~~~l~sl~~q~~--~~~~iivvdd~s~d~--t~~~~~~~~~~~~~~~~~~~-~~~~-~g-------------~~~~~ 70 (180)
T cd06423 10 AVIERTIESLLALDY--PKLEVIVVDDGSTDD--TLEILEELAALYIRRVLVVR-DKEN-GG-------------KAGAL 70 (180)
T ss_pred HHHHHHHHHHHhCCC--CceEEEEEeCCCccc--hHHHHHHHhccccceEEEEE-eccc-CC-------------chHHH
Confidence 677788999998764 357777777776652 22222221111 0121111 1110 11 01222
Q ss_pred HhhhhhcCCCCCeEEEEeccEEEecC-hHhh
Q 018567 158 NYLANLLPPCVHKVVYLDSDLVLVDD-ISKL 187 (354)
Q Consensus 158 l~l~~llp~~v~RvLYLDsD~IV~~D-I~~L 187 (354)
...-+... .+-|+++|+|.++..+ |.++
T Consensus 71 n~~~~~~~--~~~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 71 NAGLRHAK--GDIVVVLDADTILEPDALKRL 99 (180)
T ss_pred HHHHHhcC--CCEEEEECCCCCcChHHHHHH
Confidence 22222223 6889999999999877 5556
No 41
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=66.02 E-value=3.1 Score=32.90 Aligned_cols=31 Identities=16% Similarity=0.252 Sum_probs=24.6
Q ss_pred chhHHHhhhhhcCCCCCeEEEEeccEEEecCh-Hhhh
Q 018567 153 LNYARNYLANLLPPCVHKVVYLDSDLVLVDDI-SKLA 188 (354)
Q Consensus 153 ~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI-~~L~ 188 (354)
.-++|+.+--.... ||+|.|+++++++ +++.
T Consensus 66 sD~~R~~~L~~~GG-----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 66 SDLLRYLVLYKYGG-----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred HHHHHHHHHHHcCc-----EEEeCccccCcchhhhhh
Confidence 35889887655554 8999999999999 6654
No 42
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=65.55 E-value=28 Score=35.19 Aligned_cols=115 Identities=14% Similarity=0.109 Sum_probs=51.4
Q ss_pred ceEEE-EEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEE-EEEcCCcccccccccc
Q 018567 67 AIHVA-MTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQ-IYPFDDTAVSGLISTS 144 (354)
Q Consensus 67 ~i~I~-~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~-~~~~d~~~~~~~is~~ 144 (354)
.++|+ |+|+. ..++.-++.||+++.+..+.+.+.|-.|+... ...+.++ .|.. .++ +...+.+.+.. ...
T Consensus 94 ~~pVlV~AcNR--p~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~--~~~~vi~-~y~~-~v~~i~~~~~~~i~~--~~~ 165 (434)
T PF03071_consen 94 VIPVLVFACNR--PDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDE--EVAEVIK-SYGD-QVTYIQHPDFSPITI--PPK 165 (434)
T ss_dssp ---EEEEESS---TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-H--HHHHHHH-GGGG-GSEEEE-S--S-------TT
T ss_pred cceEEEEecCC--cHHHHHHHHHHHHcCCCCCCccEEEEecCCcH--HHHHHHH-Hhhh-hheeeecCCcCCcee--Ccc
Confidence 35554 66653 44566789999998765455666555566543 3334443 3422 122 23333222211 111
Q ss_pred hh--cccCCcchhHHHhhhhhcCC-CCCeEEEEeccEEEecChHhhhc
Q 018567 145 IR--SALDCPLNYARNYLANLLPP-CVHKVVYLDSDLVLVDDISKLAA 189 (354)
Q Consensus 145 ~~--~~~~~~~~y~Rl~l~~llp~-~v~RvLYLDsD~IV~~DI~~L~~ 189 (354)
.+ .++.....-+|.-|..++.. .+++||.|.-|+.|--|.=+-|+
T Consensus 166 ~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~ 213 (434)
T PF03071_consen 166 EKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFS 213 (434)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHH
Confidence 00 00111123344446666631 48999999999999988765554
No 43
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=65.54 E-value=62 Score=30.28 Aligned_cols=91 Identities=22% Similarity=0.217 Sum_probs=47.8
Q ss_pred hchHHHHHHHHHhcCCCCcEEEEEEeCCCCch--HHHHHHH-HhhCCCeeEEEEEcCCcccccccccchhcccCCcchhH
Q 018567 80 RGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN--NLLHETI-SHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYA 156 (354)
Q Consensus 80 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~--~~l~~~l-~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~ 156 (354)
..+..+|.||+.++.....+.+.|+.++.++. +.+.+.. ....+ .+++...+.+ .+ ..-+
T Consensus 12 ~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~--~v~vi~~~~n--~G-------------~~~a 74 (299)
T cd02510 12 STLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLP--KVKVLRLKKR--EG-------------LIRA 74 (299)
T ss_pred HHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCC--cEEEEEcCCC--CC-------------HHHH
Confidence 77888999999877532234666666665541 1111111 11223 3444432211 01 1223
Q ss_pred HHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 157 RNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 157 Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
|......-. -+=|++||+|+++..+ |..|.+
T Consensus 75 ~N~g~~~A~--gd~i~fLD~D~~~~~~wL~~ll~ 106 (299)
T cd02510 75 RIAGARAAT--GDVLVFLDSHCEVNVGWLEPLLA 106 (299)
T ss_pred HHHHHHHcc--CCEEEEEeCCcccCccHHHHHHH
Confidence 333333332 4899999999999654 455554
No 44
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=65.37 E-value=44 Score=29.18 Aligned_cols=96 Identities=11% Similarity=0.037 Sum_probs=48.2
Q ss_pred chhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhH
Q 018567 78 YLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYA 156 (354)
Q Consensus 78 yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~ 156 (354)
....+.-+|.||+..+-.+..+.+.|+.++.++. .+..+ .....+..++.+...+. .. +.. ...+
T Consensus 8 ~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~-~~~~~~~~~v~~~~~~~---~~--~~g--------~~~a 73 (229)
T cd04192 8 EAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILE-FAAAKPNFQLKILNNSR---VS--ISG--------KKNA 73 (229)
T ss_pred cHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHH-HHHhCCCcceEEeeccC---cc--cch--------hHHH
Confidence 3456778899998876533347777777765542 12222 11123333343332221 00 000 0122
Q ss_pred HHhhhhhcCCCCCeEEEEeccEEEecCh-Hhhhc
Q 018567 157 RNYLANLLPPCVHKVVYLDSDLVLVDDI-SKLAA 189 (354)
Q Consensus 157 Rl~l~~llp~~v~RvLYLDsD~IV~~DI-~~L~~ 189 (354)
+....... ..+-|+++|+|.++..|. +.|..
T Consensus 74 ~n~g~~~~--~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 74 LTTAIKAA--KGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred HHHHHHHh--cCCEEEEECCCcccCHHHHHHHHH
Confidence 22222222 268999999999887653 33443
No 45
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=63.36 E-value=80 Score=25.64 Aligned_cols=88 Identities=17% Similarity=0.149 Sum_probs=49.9
Q ss_pred hhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhHHH
Q 018567 79 LRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARN 158 (354)
Q Consensus 79 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~Rl 158 (354)
...+.-++.|+.+... ....+.|+.++... ...+.+.+..+ ++++...+.+ .+ .+.+|.
T Consensus 9 ~~~l~~~l~sl~~~~~--~~~~iiivdd~s~~--~~~~~~~~~~~--~~~~~~~~~~--~g-------------~~~a~n 67 (166)
T cd04186 9 LEYLKACLDSLLAQTY--PDFEVIVVDNASTD--GSVELLRELFP--EVRLIRNGEN--LG-------------FGAGNN 67 (166)
T ss_pred HHHHHHHHHHHHhccC--CCeEEEEEECCCCc--hHHHHHHHhCC--CeEEEecCCC--cC-------------hHHHhh
Confidence 5567788999998765 34667777776654 33334443333 3333332211 01 122333
Q ss_pred hhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 159 YLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 159 ~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
..-+.. ..+-++++|+|.++..+ +..+.+
T Consensus 68 ~~~~~~--~~~~i~~~D~D~~~~~~~l~~~~~ 97 (166)
T cd04186 68 QGIREA--KGDYVLLLNPDTVVEPGALLELLD 97 (166)
T ss_pred HHHhhC--CCCEEEEECCCcEECccHHHHHHH
Confidence 332333 37899999999998776 445554
No 46
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=60.94 E-value=78 Score=24.72 Aligned_cols=30 Identities=13% Similarity=0.037 Sum_probs=22.1
Q ss_pred hhchHHHHHHHHHhcCCCCcEEEEEEeCCCCc
Q 018567 79 LRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDA 110 (354)
Q Consensus 79 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~ 110 (354)
...+..++.|+.+... ....++|+.++.++
T Consensus 9 ~~~l~~~l~s~~~~~~--~~~~i~i~~~~~~~ 38 (156)
T cd00761 9 EPYLERCLESLLAQTY--PNFEVIVVDDGSTD 38 (156)
T ss_pred HHHHHHHHHHHHhCCc--cceEEEEEeCCCCc
Confidence 5667788999988874 34677788877665
No 47
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=59.63 E-value=95 Score=27.22 Aligned_cols=98 Identities=14% Similarity=0.111 Sum_probs=52.5
Q ss_pred hhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhHH
Q 018567 79 LRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYAR 157 (354)
Q Consensus 79 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~R 157 (354)
...+..++.||+..+-. .++.+.|+.++..+. .++.+.....++..++++...... ... +.+ ..++|
T Consensus 9 ~~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~-~~~--~~G--------~~~a~ 76 (219)
T cd06913 9 EQWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHN-SPS--PKG--------VGYAK 76 (219)
T ss_pred HHHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEeccc-CCC--Ccc--------HHHHH
Confidence 56677889999876542 247777777766542 222222222333323333322110 000 011 24666
Q ss_pred HhhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 158 NYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 158 l~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
....+.-. -+-+++||+|.++..+ |..++..
T Consensus 77 N~g~~~a~--gd~i~~lD~D~~~~~~~l~~~~~~ 108 (219)
T cd06913 77 NQAIAQSS--GRYLCFLDSDDVMMPQRIRLQYEA 108 (219)
T ss_pred HHHHHhcC--CCEEEEECCCccCChhHHHHHHHH
Confidence 66555443 5899999999886654 5555543
No 48
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=59.55 E-value=1.1e+02 Score=26.90 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=51.8
Q ss_pred EEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcc
Q 018567 69 HVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSA 148 (354)
Q Consensus 69 ~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~ 148 (354)
-|++.+=++-...+..++.|+.+.+ +..+.|+.++.++ .....+....+...+.+.. ... .++
T Consensus 3 sVvIp~~ne~~~~l~~~l~sl~~q~----~~eiivvdd~s~d--~~~~~l~~~~~~~~~~v~~--~~~-~g~-------- 65 (235)
T cd06434 3 TVIIPVYDEDPDVFRECLRSILRQK----PLEIIVVTDGDDE--PYLSILSQTVKYGGIFVIT--VPH-PGK-------- 65 (235)
T ss_pred EEEEeecCCChHHHHHHHHHHHhCC----CCEEEEEeCCCCh--HHHHHHHhhccCCcEEEEe--cCC-CCh--------
Confidence 4555443333367788899999876 3566677777665 2333332222221222221 110 111
Q ss_pred cCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 149 LDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 149 ~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
..++...-+.. ..+-|++||+|+++..| |.+|.+.
T Consensus 66 -----~~a~n~g~~~a--~~d~v~~lD~D~~~~~~~l~~l~~~ 101 (235)
T cd06434 66 -----RRALAEGIRHV--TTDIVVLLDSDTVWPPNALPEMLKP 101 (235)
T ss_pred -----HHHHHHHHHHh--CCCEEEEECCCceeChhHHHHHHHh
Confidence 11121111122 36999999999999998 6666654
No 49
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=59.43 E-value=97 Score=27.77 Aligned_cols=103 Identities=16% Similarity=0.050 Sum_probs=51.6
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhh-CCCeeEEEEEcCCcccccccccchh
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHS-FPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~-~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
+-|++.+-+ --..+.-++.||+...-.+..+.+.|+.++.++ .-.+.+++. .+. .+++..+....-.++
T Consensus 3 vsIiIp~~N-e~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d--~t~~i~~~~~~~~-~~~i~~~~~~~~~G~------ 72 (241)
T cd06427 3 YTILVPLYK-EAEVLPQLIASLSALDYPRSKLDVKLLLEEDDE--ETIAAARALRLPS-IFRVVVVPPSQPRTK------ 72 (241)
T ss_pred EEEEEecCC-cHHHHHHHHHHHHhCcCCcccEEEEEEECCCCc--hHHHHHHHhccCC-CeeEEEecCCCCCch------
Confidence 456666533 345677899999875432235777667676554 222333321 111 233333222110010
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecCh-Hhhhc
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDI-SKLAA 189 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI-~~L~~ 189 (354)
..++-..-+.-. -+=|+++|+|+++-.|- .++..
T Consensus 73 -------~~a~n~g~~~a~--gd~i~~~DaD~~~~~~~l~~~~~ 107 (241)
T cd06427 73 -------PKACNYALAFAR--GEYVVIYDAEDAPDPDQLKKAVA 107 (241)
T ss_pred -------HHHHHHHHHhcC--CCEEEEEcCCCCCChHHHHHHHH
Confidence 122222222222 58899999998877653 34443
No 50
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=56.88 E-value=8.4 Score=34.92 Aligned_cols=26 Identities=31% Similarity=0.534 Sum_probs=22.0
Q ss_pred hhhhhcCCCCCeEEEEeccEEEecChH
Q 018567 159 YLANLLPPCVHKVVYLDSDLVLVDDIS 185 (354)
Q Consensus 159 ~l~~llp~~v~RvLYLDsD~IV~~DI~ 185 (354)
.++.+||. ++-||+||+|+-|+..=.
T Consensus 34 vva~~L~~-~~~vlflDaDigVvNp~~ 59 (222)
T PF03314_consen 34 VVAKILPE-YDWVLFLDADIGVVNPNR 59 (222)
T ss_pred HHHHHhcc-CCEEEEEcCCceeecCcc
Confidence 46788996 999999999999998643
No 51
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=56.87 E-value=1.2e+02 Score=25.85 Aligned_cols=101 Identities=17% Similarity=0.139 Sum_probs=53.6
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch--HHHHHHHHhhCCCeeEEEEEcCCcccccccccch
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN--NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~--~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
+-|++.+-+.-+..+..++.||+.... .++.+.|+.++.+.. +.+.+.+....+ .++++....+ . .
T Consensus 3 vsiii~~~n~~~~~l~~~l~sl~~q~~--~~~eiivvd~gs~d~~~~~~~~~~~~~~~--~~~~~~~~~~---~----g- 70 (202)
T cd04184 3 ISIVMPVYNTPEKYLREAIESVRAQTY--PNWELCIADDASTDPEVKRVLKKYAAQDP--RIKVVFREEN---G----G- 70 (202)
T ss_pred EEEEEecccCcHHHHHHHHHHHHhCcC--CCeEEEEEeCCCCChHHHHHHHHHHhcCC--CEEEEEcccC---C----C-
Confidence 445655544445788899999998764 346676666665541 122222222222 2333321111 0 0
Q ss_pred hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 146 RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
...++........ -+=++++|+|.++..| +..+.+
T Consensus 71 -------~~~a~n~g~~~a~--~d~i~~ld~D~~~~~~~l~~~~~ 106 (202)
T cd04184 71 -------ISAATNSALELAT--GEFVALLDHDDELAPHALYEVVK 106 (202)
T ss_pred -------HHHHHHHHHHhhc--CCEEEEECCCCcCChHHHHHHHH
Confidence 1233333333332 4899999999999776 444443
No 52
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=56.36 E-value=75 Score=31.01 Aligned_cols=40 Identities=8% Similarity=-0.028 Sum_probs=27.2
Q ss_pred EEE-EEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCc
Q 018567 69 HVA-MTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDA 110 (354)
Q Consensus 69 ~I~-~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~ 110 (354)
+|+ ++++ -...+.-++.||++..+..++..++|..|+..+
T Consensus 3 PVlv~ayN--Rp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~ 43 (334)
T cd02514 3 PVLVIACN--RPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYE 43 (334)
T ss_pred CEEEEecC--CHHHHHHHHHHHHhccccCCCceEEEEeCCCch
Confidence 444 4444 456677899999998533356778888888665
No 53
>PRK15383 type III secretion system protein; Provisional
Probab=55.00 E-value=6.5 Score=36.32 Aligned_cols=23 Identities=30% Similarity=0.580 Sum_probs=20.0
Q ss_pred CeEEEEeccEEEecChHhhhccC
Q 018567 169 HKVVYLDSDLVLVDDISKLAATP 191 (354)
Q Consensus 169 ~RvLYLDsD~IV~~DI~~L~~~d 191 (354)
+-+||||+|||+.+-|.-|+.-|
T Consensus 220 ~GCIYLD~DMilT~KLG~ly~PD 242 (335)
T PRK15383 220 GGCIYLDADMLLTDKLGTLYLPD 242 (335)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 66999999999999999988543
No 54
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=54.69 E-value=6.7 Score=36.26 Aligned_cols=24 Identities=29% Similarity=0.607 Sum_probs=20.4
Q ss_pred CCeEEEEeccEEEecChHhhhccC
Q 018567 168 VHKVVYLDSDLVLVDDISKLAATP 191 (354)
Q Consensus 168 v~RvLYLDsD~IV~~DI~~L~~~d 191 (354)
-+-+||||+|||+.+-+.-|+.-|
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PD 234 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPD 234 (326)
T ss_pred CCceEEeecceeeecccccEEcCC
Confidence 367999999999999999988543
No 55
>PRK15384 type III secretion system protein; Provisional
Probab=54.46 E-value=6.4 Score=36.38 Aligned_cols=23 Identities=17% Similarity=0.541 Sum_probs=20.0
Q ss_pred CeEEEEeccEEEecChHhhhccC
Q 018567 169 HKVVYLDSDLVLVDDISKLAATP 191 (354)
Q Consensus 169 ~RvLYLDsD~IV~~DI~~L~~~d 191 (354)
+-+||||+|||+.+-+.-|+.-|
T Consensus 217 ~GCIYLDaDMilT~KLG~ly~PD 239 (336)
T PRK15384 217 SGCIYLDADMIITEKLGGIYIPD 239 (336)
T ss_pred CceEEeeccceeecccccEEcCC
Confidence 66899999999999999988543
No 56
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=53.42 E-value=49 Score=33.01 Aligned_cols=95 Identities=19% Similarity=0.253 Sum_probs=55.9
Q ss_pred EEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHh---hCCCeeEEEEEcCCcccccccccch
Q 018567 69 HVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISH---SFPSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 69 ~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~---~~p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
.|++++-+.=--.++-+++|+++.++. .-+.=.|+.|+.|+++.|++.|.+ .|.. . +..|..+.-+++|..
T Consensus 158 SVviVFHNEGws~LmRTVHSVi~RsP~-~~l~eivlvDDfSdKehLkekLDeYv~~fnG-l--VkV~Rne~REGLI~a-- 231 (603)
T KOG3737|consen 158 SVVIVFHNEGWSTLMRTVHSVIKRSPR-KYLAEIVLVDDFSDKEHLKEKLDEYVKLFNG-L--VKVFRNERREGLIQA-- 231 (603)
T ss_pred eEEEEEecCccHHHHHHHHHHHhcCcH-HhhheEEEeccCCccHHHHHHHHHHHHHhcC-E--EEEEecchhhhhhhh--
Confidence 344444444445677899999999874 556666788888876667766653 2433 2 223334444455432
Q ss_pred hcccCCcchhHHHhhh-hhcCCCCCeEEEEeccEEEecC
Q 018567 146 RSALDCPLNYARNYLA-NLLPPCVHKVVYLDSDLVLVDD 183 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~l~-~llp~~v~RvLYLDsD~IV~~D 183 (354)
|-.=+ .-+ =+=+||||+-.=|..+
T Consensus 232 -----------RSiGA~~at---GeV~ifLDAHCEVntN 256 (603)
T KOG3737|consen 232 -----------RSIGAQKAT---GEVLIFLDAHCEVNTN 256 (603)
T ss_pred -----------hccchhhcc---ccEEEEEecceeeecc
Confidence 11111 112 2568899998888766
No 57
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=52.87 E-value=1.5e+02 Score=25.40 Aligned_cols=92 Identities=11% Similarity=0.063 Sum_probs=49.5
Q ss_pred hhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhHH
Q 018567 79 LRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYAR 157 (354)
Q Consensus 79 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~R 157 (354)
...+..++.||+.... ..+.+.|+.++..+. .++.+.+...+|. .+.++..+.+ .+. +-.+
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~eiiVvddgS~d~t~~~~~~~~~~~~~-~~~~~~~~~~-------~G~--------~~~~ 71 (214)
T cd04196 10 EKYLREQLDSILAQTY--KNDELIISDDGSTDGTVEIIKEYIDKDPF-IIILIRNGKN-------LGV--------ARNF 71 (214)
T ss_pred HHHHHHHHHHHHhCcC--CCeEEEEEeCCCCCCcHHHHHHHHhcCCc-eEEEEeCCCC-------ccH--------HHHH
Confidence 3556788999988764 257787777776552 2222333333431 2222221111 010 0111
Q ss_pred HhhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 158 NYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 158 l~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
...... . .-+-|++||+|.+...+ |..+.+.
T Consensus 72 n~g~~~-~-~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 72 ESLLQA-A-DGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred HHHHHh-C-CCCEEEEECCCcccChhHHHHHHHH
Confidence 111111 2 36899999999888776 7788875
No 58
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=52.37 E-value=1.5e+02 Score=25.46 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=54.8
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccchh
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
+-|++.+- |....+..++.||++..- .++.+.|+.++.+++ .+..+.+...++.++++++..+.+. + .+..
T Consensus 3 vsviip~~-n~~~~l~~~L~sl~~q~~--~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~--g-~~~~-- 74 (196)
T cd02520 3 VSILKPLC-GVDPNLYENLESFFQQDY--PKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKV--G-INPK-- 74 (196)
T ss_pred eEEEEecC-CCCccHHHHHHHHHhccC--CCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcC--C-CCHh--
Confidence 45666554 335567788999987653 247777777776652 1222333345666555555433211 1 0000
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
........+. . ..+=++++|+|+++-.+ |..|.+
T Consensus 75 -------~~~~n~g~~~-a-~~d~i~~~D~D~~~~~~~l~~l~~ 109 (196)
T cd02520 75 -------VNNLIKGYEE-A-RYDILVISDSDISVPPDYLRRMVA 109 (196)
T ss_pred -------HHHHHHHHHh-C-CCCEEEEECCCceEChhHHHHHHH
Confidence 0111111111 2 26899999999987543 334443
No 59
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=48.59 E-value=1.6e+02 Score=27.37 Aligned_cols=94 Identities=19% Similarity=0.165 Sum_probs=48.3
Q ss_pred hchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhHHHh
Q 018567 80 RGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNY 159 (354)
Q Consensus 80 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~Rl~ 159 (354)
..+..++.|+.+... +.++.+.|+.++.+. .....+.+......+..+..... -...++ .+-+|..
T Consensus 17 ~~l~~~l~~l~~~~~-~~~~eiIvvd~~s~~--~~~~~l~~~~~~~~~~~~i~~~~-~~~~f~----------~a~arN~ 82 (281)
T PF10111_consen 17 ERLRNCLESLSQFQS-DPDFEIIVVDDGSSD--EFDEELKKLCEKNGFIRYIRHED-NGEPFS----------RAKARNI 82 (281)
T ss_pred HHHHHHHHHHHhcCC-CCCEEEEEEECCCch--hHHHHHHHHHhccCceEEEEcCC-CCCCcC----------HHHHHHH
Confidence 344455677766544 357887666666655 22222222222112221111110 000111 2456666
Q ss_pred hhhhcCCCCCeEEEEeccEEEecCh-Hhhhc
Q 018567 160 LANLLPPCVHKVVYLDSDLVLVDDI-SKLAA 189 (354)
Q Consensus 160 l~~llp~~v~RvLYLDsD~IV~~DI-~~L~~ 189 (354)
....-. -+-|+++|+|+++-.|. ..+.+
T Consensus 83 g~~~A~--~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 83 GAKYAR--GDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred HHHHcC--CCEEEEEcCCeeeCHHHHHHHHH
Confidence 666554 58999999999998764 34555
No 60
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=47.78 E-value=33 Score=32.43 Aligned_cols=93 Identities=13% Similarity=0.086 Sum_probs=52.7
Q ss_pred EEEEeCccc--hhc-hHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchh
Q 018567 70 VAMTLDAPY--LRG-SMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 70 I~~~~D~~y--l~~-~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
|-++-..++ ++. +..++.|+.+++++ ..+++++.+ .+.+.+. +|.. +-...-.+.++....
T Consensus 48 IW~~W~QG~e~aP~~Vk~ci~s~~k~~~~---~~Vi~lt~~-----Ni~~Yv~--~P~~------i~~k~~~g~i~~a~~ 111 (276)
T PF05704_consen 48 IWVCWWQGEENAPEIVKKCINSWRKNAPD---YEVILLTED-----NIKDYVD--IPDF------ILEKYEKGKISPAHF 111 (276)
T ss_pred EEEEECCCccccCHHHHHHHHHHHHHCCC---CeEEEEChH-----HHHHHcC--Cchh------HHHHHHcCCCchhHH
Confidence 444444433 344 46889999999963 566777743 3443331 3320 001111122322111
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhhc
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLAA 189 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~~ 189 (354)
.-+.|+.|=..-.. +|+|+++++.++|.+.+.
T Consensus 112 ------SDilR~~LL~~yGG-----vWiDatv~~t~~l~~~~~ 143 (276)
T PF05704_consen 112 ------SDILRLALLYKYGG-----VWIDATVYLTKPLDDEIF 143 (276)
T ss_pred ------HHHHHHHHHHHcCc-----EEeCCceEECCchhHHHh
Confidence 25788876444443 899999999999997653
No 61
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=46.72 E-value=93 Score=27.49 Aligned_cols=97 Identities=11% Similarity=0.132 Sum_probs=46.4
Q ss_pred EEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchH---HHHHHHHhhCCCeeEEEEEcCCcccccccccchh
Q 018567 70 VAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANN---LLHETISHSFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 70 I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~---~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
|++.+=+.....+.-++.|+....- .++.+.|+.++..+.. .+++.++ .++. ++++...+.. .+..
T Consensus 2 iiip~~ne~~~~l~~~l~sl~~q~~--~~~eiiVvdd~s~D~t~~~~i~~~~~-~~~~-~i~~i~~~~~--~G~~----- 70 (236)
T cd06435 2 IHVPCYEEPPEMVKETLDSLAALDY--PNFEVIVIDNNTKDEALWKPVEAHCA-QLGE-RFRFFHVEPL--PGAK----- 70 (236)
T ss_pred eeEeeCCCcHHHHHHHHHHHHhCCC--CCcEEEEEeCCCCchhHHHHHHHHHH-HhCC-cEEEEEcCCC--CCCc-----
Confidence 3444433333455678888876543 2467766666654411 1222222 2322 3444332211 1110
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecCh
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDI 184 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI 184 (354)
.-++....+......|=|+++|+|+++-.|-
T Consensus 71 -------~~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~ 101 (236)
T cd06435 71 -------AGALNYALERTAPDAEIIAVIDADYQVEPDW 101 (236)
T ss_pred -------hHHHHHHHHhcCCCCCEEEEEcCCCCcCHHH
Confidence 1122332233322368899999999876653
No 62
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=46.51 E-value=1.8e+02 Score=24.78 Aligned_cols=84 Identities=18% Similarity=0.146 Sum_probs=43.9
Q ss_pred hchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhHHHh
Q 018567 80 RGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNY 159 (354)
Q Consensus 80 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~Rl~ 159 (354)
..+.-++.|++..... +..+.|+.++.+. ....+.+++......++++....+ .+ .+.+|..
T Consensus 13 ~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~-d~t~~~~~~~~~~~~i~~i~~~~n-------~G--------~~~a~N~ 74 (201)
T cd04195 13 EFLREALESILKQTLP--PDEVVLVKDGPVT-QSLNEVLEEFKRKLPLKVVPLEKN-------RG--------LGKALNE 74 (201)
T ss_pred HHHHHHHHHHHhcCCC--CcEEEEEECCCCc-hhHHHHHHHHHhcCCeEEEEcCcc-------cc--------HHHHHHH
Confidence 4567789999887642 3556666677644 233333322111112444432211 01 1233433
Q ss_pred hhhhcCCCCCeEEEEeccEEEecC
Q 018567 160 LANLLPPCVHKVVYLDSDLVLVDD 183 (354)
Q Consensus 160 l~~llp~~v~RvLYLDsD~IV~~D 183 (354)
.-..- .-+=|+++|+|.++..+
T Consensus 75 g~~~a--~gd~i~~lD~Dd~~~~~ 96 (201)
T cd04195 75 GLKHC--TYDWVARMDTDDISLPD 96 (201)
T ss_pred HHHhc--CCCEEEEeCCccccCcH
Confidence 33332 25889999999988764
No 63
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=44.78 E-value=2.9e+02 Score=27.68 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=54.6
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccch
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
.+-|++.+=+ -...+..++.|+++.+- .++.+.++.|+.+++ .+..+.+.+.++. +++.....+ .++
T Consensus 76 ~vsViIP~yN-E~~~i~~~l~sll~q~y--p~~eIivVdDgs~D~t~~~~~~~~~~~~~--v~vv~~~~n--~Gk----- 143 (444)
T PRK14583 76 LVSILVPCFN-EGLNARETIHAALAQTY--TNIEVIAINDGSSDDTAQVLDALLAEDPR--LRVIHLAHN--QGK----- 143 (444)
T ss_pred cEEEEEEeCC-CHHHHHHHHHHHHcCCC--CCeEEEEEECCCCccHHHHHHHHHHhCCC--EEEEEeCCC--CCH-----
Confidence 4667766543 33456788899887654 258888888877652 1222223334554 333332211 110
Q ss_pred hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 146 RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
+.++-..-.. . ..|-++.+|+|.++..| +.++.+
T Consensus 144 --------a~AlN~gl~~-a-~~d~iv~lDAD~~~~~d~L~~lv~ 178 (444)
T PRK14583 144 --------AIALRMGAAA-A-RSEYLVCIDGDALLDKNAVPYLVA 178 (444)
T ss_pred --------HHHHHHHHHh-C-CCCEEEEECCCCCcCHHHHHHHHH
Confidence 1111111111 2 37899999999999877 344443
No 64
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=44.41 E-value=48 Score=30.11 Aligned_cols=23 Identities=22% Similarity=0.223 Sum_probs=18.9
Q ss_pred CCCeEEEEeccEEEecC-hHhhhc
Q 018567 167 CVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 167 ~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
..+-|+.+|+|+++..| |.+|..
T Consensus 73 ~~e~i~~~DaD~~~~~~~l~~l~~ 96 (244)
T cd04190 73 DPEFILLVDADTKFDPDSIVQLYK 96 (244)
T ss_pred CCCEEEEECCCCcCCHhHHHHHHH
Confidence 37899999999999888 566664
No 65
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=42.77 E-value=1.8e+02 Score=25.53 Aligned_cols=101 Identities=11% Similarity=0.061 Sum_probs=51.7
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccchh
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
+.|++.+= |-...+.-++.|+.+....+.++.+.|+.++.+++ .+..+.+.+..+. +++.. +.+ .+
T Consensus 2 ~sIiip~~-n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~--v~~i~-~~~--~~------- 68 (249)
T cd02525 2 VSIIIPVR-NEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPR--IRLID-NPK--RI------- 68 (249)
T ss_pred EEEEEEcC-CchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCe--EEEEe-CCC--CC-------
Confidence 34555442 23456677899998765433467777776665541 1222222222222 33322 111 01
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
...++...-+.. ..+-++++|+|.++..+ |..+.+
T Consensus 69 ------~~~a~N~g~~~a--~~d~v~~lD~D~~~~~~~l~~~~~ 104 (249)
T cd02525 69 ------QSAGLNIGIRNS--RGDIIIRVDAHAVYPKDYILELVE 104 (249)
T ss_pred ------chHHHHHHHHHh--CCCEEEEECCCccCCHHHHHHHHH
Confidence 112233332333 26899999999998655 555554
No 66
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=42.61 E-value=2.2e+02 Score=24.57 Aligned_cols=91 Identities=13% Similarity=0.100 Sum_probs=47.2
Q ss_pred hchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhHHH
Q 018567 80 RGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARN 158 (354)
Q Consensus 80 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~Rl 158 (354)
..+..++.|+.+... ...+.+.|+.++..++ .+..+.+.+..+. ++++....+ .+ ...++.
T Consensus 10 ~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~--i~~~~~~~n--~G-------------~~~a~n 71 (224)
T cd06442 10 ENIPELIERLDAALK-GIDYEIIVVDDNSPDGTAEIVRELAKEYPR--VRLIVRPGK--RG-------------LGSAYI 71 (224)
T ss_pred hhHHHHHHHHHHhhc-CCCeEEEEEeCCCCCChHHHHHHHHHhCCc--eEEEecCCC--CC-------------hHHHHH
Confidence 456778888887653 2357777777766542 2222223333443 233321111 01 123333
Q ss_pred hhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 159 YLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 159 ~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
..-..-. -+-|++||+|.++..+ |..|.+.
T Consensus 72 ~g~~~a~--gd~i~~lD~D~~~~~~~l~~l~~~ 102 (224)
T cd06442 72 EGFKAAR--GDVIVVMDADLSHPPEYIPELLEA 102 (224)
T ss_pred HHHHHcC--CCEEEEEECCCCCCHHHHHHHHHH
Confidence 3222232 2789999999887654 5556653
No 67
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=40.30 E-value=3.2e+02 Score=26.75 Aligned_cols=109 Identities=14% Similarity=0.148 Sum_probs=55.6
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCe-eEEEEEcCCcccccccccc
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSL-SFQIYPFDDTAVSGLISTS 144 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~-~~~~~~~d~~~~~~~is~~ 144 (354)
.+-|++.+- |-...+..++.|+++.+- +.++.+.|+.|+..+. .++.+.+.+.+|.. ++++...... -.+ .+.
T Consensus 41 ~VSVIIpa~-Ne~~~L~~~L~sL~~q~y-p~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~-~~g-~~G- 115 (384)
T TIGR03469 41 AVVAVVPAR-NEADVIGECVTSLLEQDY-PGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPL-PPG-WSG- 115 (384)
T ss_pred CEEEEEecC-CcHhHHHHHHHHHHhCCC-CCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCC-CCC-Ccc-
Confidence 466666654 334677889999987643 2347777777666542 23333333345521 3444332110 000 000
Q ss_pred hhcccCCcchhHHHh----hhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 145 IRSALDCPLNYARNY----LANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 145 ~~~~~~~~~~y~Rl~----l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
-.++... ..+..+ +.|-++++|+|+++-.| |..+.+
T Consensus 116 --------k~~A~n~g~~~A~~~~~-~gd~llflDaD~~~~p~~l~~lv~ 156 (384)
T TIGR03469 116 --------KLWAVSQGIAAARTLAP-PADYLLLTDADIAHGPDNLARLVA 156 (384)
T ss_pred --------hHHHHHHHHHHHhccCC-CCCEEEEECCCCCCChhHHHHHHH
Confidence 0111111 111222 26899999999998654 466654
No 68
>PRK10018 putative glycosyl transferase; Provisional
Probab=38.94 E-value=3.3e+02 Score=25.50 Aligned_cols=103 Identities=17% Similarity=0.095 Sum_probs=57.2
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchh
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
.+-|++.+- |-...+.-+|.|++..+- .++.+.|+.|+.+..+.+.+.+. .+...++++...+.+ .+
T Consensus 6 ~VSVIip~y-N~~~~l~~~l~Svl~Qt~--~~~EiIVVDDgS~~~~~~~~~~~-~~~~~ri~~i~~~~n-------~G-- 72 (279)
T PRK10018 6 LISIYMPTW-NRQQLAIRAIKSVLRQDY--SNWEMIIVDDCSTSWEQLQQYVT-ALNDPRITYIHNDIN-------SG-- 72 (279)
T ss_pred EEEEEEEeC-CCHHHHHHHHHHHHhCCC--CCeEEEEEECCCCCHHHHHHHHH-HcCCCCEEEEECCCC-------CC--
Confidence 467777664 334445678999997654 35777777776653123333333 222223444332111 11
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
.+.+|...-+.-. -+-|++||+|.++.-+ |..+.+.
T Consensus 73 ------~~~a~N~gi~~a~--g~~I~~lDaDD~~~p~~l~~~~~~ 109 (279)
T PRK10018 73 ------ACAVRNQAIMLAQ--GEYITGIDDDDEWTPNRLSVFLAH 109 (279)
T ss_pred ------HHHHHHHHHHHcC--CCEEEEECCCCCCCccHHHHHHHH
Confidence 1233443333332 5789999999998876 6666553
No 69
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=38.51 E-value=1.5e+02 Score=27.57 Aligned_cols=114 Identities=20% Similarity=0.170 Sum_probs=54.2
Q ss_pred ccchhchHH-HHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCC--CeeEEEEEcCCcccccccccchhcccCC
Q 018567 76 APYLRGSMA-AIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFP--SLSFQIYPFDDTAVSGLISTSIRSALDC 151 (354)
Q Consensus 76 ~~yl~~~~v-~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p--~~~~~~~~~d~~~~~~~is~~~~~~~~~ 151 (354)
..-++.... ++..+++.-. ++++.+-|+-+++.+. ....+.|+.... .+...+..-+...... .....+.+...
T Consensus 12 ~~iL~~~~~~~ll~li~~LG-p~nv~vSIyE~~S~D~T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~-~~~~~~~~RI~ 89 (241)
T PF11735_consen 12 EDILPSLWGDALLELIRFLG-PENVFVSIYESGSWDGTKEALRALDAELDALGVPHSIVLSDITHRDE-IERPPRLRRIE 89 (241)
T ss_pred HhHHHHHHHHHHHHHHHHhC-cCeEEEEEEeCCCCccHHHHHHHHHHHHHhCCCCeEEEeCCCccccc-ccccchhhhHH
Confidence 345665555 7888887776 5788777777766542 222233332221 2233333222111110 00000000111
Q ss_pred cchhHHHhh-hhhc------CCCCCeEEEEeccEEEe-cChHhhhccCC
Q 018567 152 PLNYARNYL-ANLL------PPCVHKVVYLDSDLVLV-DDISKLAATPL 192 (354)
Q Consensus 152 ~~~y~Rl~l-~~ll------p~~v~RvLYLDsD~IV~-~DI~~L~~~dl 192 (354)
-++-.|... --+. ...++|||||+ |+++. .|+-+|....-
T Consensus 90 ~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~~ 137 (241)
T PF11735_consen 90 YLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTRN 137 (241)
T ss_pred HHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhcC
Confidence 122333321 1111 12489999999 86655 79999887643
No 70
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=36.93 E-value=2.9e+02 Score=25.48 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=23.7
Q ss_pred hhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 154 NYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 154 ~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
...+-++...-. .++-|+.+|+|+++..| |..+..
T Consensus 83 g~l~~~~~~~~~-~~~~i~~~DaD~~~~p~~l~~~v~ 118 (254)
T cd04191 83 GNIADFCRRWGS-RYDYMVVLDADSLMSGDTIVRLVR 118 (254)
T ss_pred HHHHHHHHHhCC-CCCEEEEEeCCCCCCHHHHHHHHH
Confidence 344444443323 37899999999999987 556664
No 71
>PRK11204 N-glycosyltransferase; Provisional
Probab=36.31 E-value=3.7e+02 Score=26.41 Aligned_cols=101 Identities=15% Similarity=0.188 Sum_probs=54.7
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccch
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
.+-|++.+=+. ...+..++.|+++.+- + ++.+.|+.|+.+++ .+..+.+.+.+++ +++.....+ .++
T Consensus 55 ~vsViIp~yne-~~~i~~~l~sl~~q~y-p-~~eiiVvdD~s~d~t~~~l~~~~~~~~~--v~~i~~~~n--~Gk----- 122 (420)
T PRK11204 55 GVSILVPCYNE-GENVEETISHLLALRY-P-NYEVIAINDGSSDNTGEILDRLAAQIPR--LRVIHLAEN--QGK----- 122 (420)
T ss_pred CEEEEEecCCC-HHHHHHHHHHHHhCCC-C-CeEEEEEECCCCccHHHHHHHHHHhCCc--EEEEEcCCC--CCH-----
Confidence 56677665332 4567778899887543 2 57787888776652 2222333334553 333322211 111
Q ss_pred hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 146 RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
+.++-..-+. . ..|-++.+|+|.++-.| +.++.+
T Consensus 123 --------a~aln~g~~~-a-~~d~i~~lDaD~~~~~d~L~~l~~ 157 (420)
T PRK11204 123 --------ANALNTGAAA-A-RSEYLVCIDGDALLDPDAAAYMVE 157 (420)
T ss_pred --------HHHHHHHHHH-c-CCCEEEEECCCCCCChhHHHHHHH
Confidence 1111111111 1 37899999999999877 445544
No 72
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=35.34 E-value=89 Score=30.11 Aligned_cols=120 Identities=18% Similarity=0.156 Sum_probs=62.9
Q ss_pred CceEEEEEeCccchhchHHHHHHHHHhcCC--CCcEEEEEEeCCCCchHHHHHHHHh-hCCCeeEEEEEcCCccccc-cc
Q 018567 66 EAIHVAMTLDAPYLRGSMAAIHSVLQHSSC--PQNVLFHFVSSDKDANNLLHETISH-SFPSLSFQIYPFDDTAVSG-LI 141 (354)
Q Consensus 66 ~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~--~~~i~fhil~~~~s~~~~l~~~l~~-~~p~~~~~~~~~d~~~~~~-~i 141 (354)
.+|-||+-++..-...+...+.+++..... .+++.||++....... ........ .....+.+-.......+.. ..
T Consensus 25 GPiSvAvf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~H~v~~~~~~~-~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 103 (317)
T PF13896_consen 25 GPISVAVFVPGPDAKQALDAISYLLRCCCPRVRKNVTFHLVFPNSHFP-TSCDSIEANLSSPFSCSDFVRLLSELTSREN 103 (317)
T ss_pred CCEEEEEEecchhHHHHHHHHHHHHHhcCHHhHhhEEEEEEeecccCc-ccccccccccCCCCCcCchhhhHHHHhhhhh
Confidence 577788777765555555666666533321 1579999988765431 10000000 0000000000000000000 00
Q ss_pred ccchhcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecChHhhh
Q 018567 142 STSIRSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDISKLA 188 (354)
Q Consensus 142 s~~~~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI~~L~ 188 (354)
..........|.|..|...-.--. .+-|+.+|.|++...++.+-+
T Consensus 104 ~~~~~~~~~YPiN~LRNvAr~~a~--T~~v~~~DvD~~ps~~l~~~l 148 (317)
T PF13896_consen 104 NYDPAPNALYPINLLRNVARSGAR--TDYVFLLDVDFLPSPGLYEKL 148 (317)
T ss_pred hcccccCCCCChHHHHHHHHHhcC--cceEEEecceeeeCcchHHHH
Confidence 001112334688999988766554 689999999999999998754
No 73
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=33.40 E-value=4e+02 Score=25.92 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=55.3
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccch
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
.+-|++.+= |-...+.-++.|+++..- | ++.+.++.++.++. .++.+.+.+.+|..++++.. +... .+ .+.+.
T Consensus 42 ~VSViiP~~-nee~~l~~~L~Sl~~q~Y-p-~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~-~~~~-~G-~~~K~ 115 (373)
T TIGR03472 42 PVSVLKPLH-GDEPELYENLASFCRQDY-P-GFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVI-DARR-HG-PNRKV 115 (373)
T ss_pred CeEEEEECC-CCChhHHHHHHHHHhcCC-C-CeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEE-CCCC-CC-CChHH
Confidence 466666653 345567788999987653 2 36776655554442 23444455668876665542 2211 11 11110
Q ss_pred hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecCh
Q 018567 146 RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDDI 184 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~DI 184 (354)
.+.... +. .- ..|-++++|+|+++-.|-
T Consensus 116 -------~~l~~~-~~-~a--~ge~i~~~DaD~~~~p~~ 143 (373)
T TIGR03472 116 -------SNLINM-LP-HA--RHDILVIADSDISVGPDY 143 (373)
T ss_pred -------HHHHHH-HH-hc--cCCEEEEECCCCCcChhH
Confidence 112221 21 11 368999999999997664
No 74
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=32.17 E-value=3.7e+02 Score=24.00 Aligned_cols=106 Identities=8% Similarity=-0.002 Sum_probs=52.7
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccch
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
.+-|++.+= |-...+..++.++.+......++.+.|+.++.+++ .++.+.+.+.++...+.++.-..+ ..
T Consensus 10 ~vsVvIp~y-ne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n-----~G--- 80 (243)
T PLN02726 10 KYSIIVPTY-NERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGK-----LG--- 80 (243)
T ss_pred eEEEEEccC-CchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCC-----CC---
Confidence 466776653 34445555666666544322357777777776552 233333433454333433321110 00
Q ss_pred hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEec-ChHhhhcc
Q 018567 146 RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVD-DISKLAAT 190 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~-DI~~L~~~ 190 (354)
...++...-..- .-+-|+++|+|..+.. .|.+|++.
T Consensus 81 -------~~~a~n~g~~~a--~g~~i~~lD~D~~~~~~~l~~l~~~ 117 (243)
T PLN02726 81 -------LGTAYIHGLKHA--SGDFVVIMDADLSHHPKYLPSFIKK 117 (243)
T ss_pred -------HHHHHHHHHHHc--CCCEEEEEcCCCCCCHHHHHHHHHH
Confidence 011222211222 2579999999998643 45566653
No 75
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=29.91 E-value=3.2e+02 Score=23.24 Aligned_cols=88 Identities=7% Similarity=-0.066 Sum_probs=43.5
Q ss_pred hchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhHHHh
Q 018567 80 RGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARNY 159 (354)
Q Consensus 80 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~Rl~ 159 (354)
..+.-++.||++.+.. ...+.|+.++.++ ...+.+++......+++...+.+ .+ .+.. .+.+.-.
T Consensus 10 ~~l~~~l~sl~~q~~~--~~eiiivD~~s~d--~t~~~~~~~~~~~~i~~~~~~~n--~g-~~~~--------~n~~~~~ 74 (202)
T cd04185 10 DLLKECLDALLAQTRP--PDHIIVIDNASTD--GTAEWLTSLGDLDNIVYLRLPEN--LG-GAGG--------FYEGVRR 74 (202)
T ss_pred HHHHHHHHHHHhccCC--CceEEEEECCCCc--chHHHHHHhcCCCceEEEECccc--cc-hhhH--------HHHHHHH
Confidence 4567789999876542 3455555555544 33333433222222333332211 01 0111 1111111
Q ss_pred hhhhcCCCCCeEEEEeccEEEecChH
Q 018567 160 LANLLPPCVHKVVYLDSDLVLVDDIS 185 (354)
Q Consensus 160 l~~llp~~v~RvLYLDsD~IV~~DI~ 185 (354)
+ .....+-++++|.|.++..+.-
T Consensus 75 a---~~~~~d~v~~ld~D~~~~~~~l 97 (202)
T cd04185 75 A---YELGYDWIWLMDDDAIPDPDAL 97 (202)
T ss_pred H---hccCCCEEEEeCCCCCcChHHH
Confidence 1 1224789999999999976543
No 76
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=29.90 E-value=2.9e+02 Score=22.94 Aligned_cols=91 Identities=15% Similarity=0.144 Sum_probs=46.4
Q ss_pred hhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHh---hCCCeeEEEEEcCCcccccccccchhcccCCcchh
Q 018567 79 LRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISH---SFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNY 155 (354)
Q Consensus 79 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~---~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y 155 (354)
...+.-++.||.+.+. .++.+.|+.++.+. ...+.+.+ ..+. ++... ...+ .... .+.
T Consensus 9 ~~~l~~~l~sl~~q~~--~~~eiivvdd~s~d--~t~~~~~~~~~~~~~-~~~~~-~~~~---~~~~----------~~~ 69 (182)
T cd06420 9 PEALELVLKSVLNQSI--LPFEVIIADDGSTE--ETKELIEEFKSQFPI-PIKHV-WQED---EGFR----------KAK 69 (182)
T ss_pred hHHHHHHHHHHHhccC--CCCEEEEEeCCCch--hHHHHHHHHHhhcCC-ceEEE-EcCC---cchh----------HHH
Confidence 4556778999988763 34667677666554 22233322 1111 11111 1111 0000 122
Q ss_pred HHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 156 ARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 156 ~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
++-...+.-. -+-+++||+|.++..+ |..+.+.
T Consensus 70 ~~n~g~~~a~--g~~i~~lD~D~~~~~~~l~~~~~~ 103 (182)
T cd06420 70 IRNKAIAAAK--GDYLIFIDGDCIPHPDFIADHIEL 103 (182)
T ss_pred HHHHHHHHhc--CCEEEEEcCCcccCHHHHHHHHHH
Confidence 2333223332 5899999999999776 5555544
No 77
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=28.71 E-value=1.3e+02 Score=26.61 Aligned_cols=23 Identities=13% Similarity=0.263 Sum_probs=20.2
Q ss_pred CeEEEEeccEEEecChHhhhccC
Q 018567 169 HKVVYLDSDLVLVDDISKLAATP 191 (354)
Q Consensus 169 ~RvLYLDsD~IV~~DI~~L~~~d 191 (354)
+.++.+.+|+++.-|+.++.+..
T Consensus 98 ~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 98 EPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred CCEEEEeCCeeeCCCHHHHHHHH
Confidence 67999999999999999988753
No 78
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=28.45 E-value=79 Score=31.15 Aligned_cols=149 Identities=14% Similarity=0.149 Sum_probs=73.3
Q ss_pred cCCCCCeEEEEeccEEEecChHhhhccCCCCCc--EEEeecccc--cCccc-ccCCCCCCCcccc--cccCCCCCcccee
Q 018567 164 LPPCVHKVVYLDSDLVLVDDISKLAATPLEDHA--VLAAPEYCN--ANFTS-YFTPTFWSNPTLS--LTFSGRNACYFNT 236 (354)
Q Consensus 164 lp~~v~RvLYLDsD~IV~~DI~~L~~~dl~~~~--~~aa~e~~~--~~~~~-y~~~~~w~~~~~~--~~~~~~~~~yFNs 236 (354)
.|+ .+-|=+||.|.++.+---+|-+.=++... ..+..++.. .++.. -.+...|+..... .-+...+...+|+
T Consensus 173 yP~-AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD~nG~na 251 (364)
T KOG4748|consen 173 YPD-AEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQDCNGINA 251 (364)
T ss_pred CCC-CcEEEEecccchhhCcccchhHHhcCHHHHHHhhccccccccccCCccccccccccccchhhhceecccCCCCccc
Confidence 674 99999999999999855444433222100 111221100 00100 0011223322221 1112356777999
Q ss_pred eeEEEechHHhhhchHHHHHHHHHHh-ccccCCCCCCccHHHHh------hcCCeEecCcccc-cCCCCCCccccccccC
Q 018567 237 GVMVIDLERWRKGDYTRKIVEWMELQ-KRMRIYELGSLPPFLLV------FAGNIAPVDHRWN-QHGLGGDNYRGLCRDL 308 (354)
Q Consensus 237 GVmlinl~~wR~~~~~~~~~~~~~~~-~~~~~~~~~DQd~LN~v------f~~~i~~L~~~wN-~~~~~~~~~~~~~~~l 308 (354)
|=+|+--.+ +++-++++...- -....+...+|+++-.+ +.+.|..|+.|+= ....+ ....| -
T Consensus 252 GSfLirns~-----~~~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~~~-~~~~g----~ 321 (364)
T KOG4748|consen 252 GSFLIRNSE-----WGRLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYPNG-APGYG----Y 321 (364)
T ss_pred cceEEecCc-----cchhHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCCCC-CCCCc----c
Confidence 999994443 334444443210 01123345677776554 4567888888763 32222 11111 1
Q ss_pred CCCCCEEEeccCCCCCCCC
Q 018567 309 HPGPVSLLHWSGKGKPWVR 327 (354)
Q Consensus 309 ~~~~~~IiHy~g~~KPW~~ 327 (354)
+.+ .-++||.| + |.+
T Consensus 322 ~eg-dlvvhFaG-C--~~~ 336 (364)
T KOG4748|consen 322 EEG-DLVVHFAG-C--YVR 336 (364)
T ss_pred ccC-CeEEEecc-c--ccH
Confidence 123 47999999 4 555
No 79
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=25.61 E-value=4.1e+02 Score=22.37 Aligned_cols=31 Identities=6% Similarity=-0.075 Sum_probs=20.0
Q ss_pred hchHHHHHHHHHhcCCCCcEEEEEEeCCCCc
Q 018567 80 RGSMAAIHSVLQHSSCPQNVLFHFVSSDKDA 110 (354)
Q Consensus 80 ~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~ 110 (354)
..+..++.|+.+.......+.+.|+.++.++
T Consensus 10 ~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D 40 (183)
T cd06438 10 AVIGNTVRSLKAQDYPRELYRIFVVADNCTD 40 (183)
T ss_pred HHHHHHHHHHHhcCCCCcccEEEEEeCCCCc
Confidence 4566778888765432235677778777665
No 80
>PF01445 SH: Viral small hydrophobic protein; InterPro: IPR001477 The mumps virus SH protein is a membrane protein and not essential for virus growth []. Its function is unknown.; GO: 0016020 membrane
Probab=25.60 E-value=97 Score=21.68 Aligned_cols=22 Identities=45% Similarity=0.812 Sum_probs=15.6
Q ss_pred CCCCCCCchHHHHHHHHHHHHH
Q 018567 1 MSKTKPPHHQQFLLLLLFLLIV 22 (354)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (354)
|..-.||-++.+++|+++.+++
T Consensus 1 MpaiqpplyltfLlLill~lii 22 (57)
T PF01445_consen 1 MPAIQPPLYLTFLLLILLYLII 22 (57)
T ss_pred CCCcCCchHHHHHHHHHHHHHH
Confidence 5556778788888777766655
No 81
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=25.53 E-value=4.6e+02 Score=22.95 Aligned_cols=41 Identities=7% Similarity=-0.023 Sum_probs=24.3
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCc
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDA 110 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~ 110 (354)
+-|++.+= |....+..+|.||+.-.-....+.+.|+ |+.++
T Consensus 3 vSViIp~y-Ne~~~l~~~L~sl~~q~~~~~~~eIiVv-D~s~D 43 (232)
T cd06437 3 VTVQLPVF-NEKYVVERLIEAACALDYPKDRLEIQVL-DDSTD 43 (232)
T ss_pred eEEEEecC-CcHHHHHHHHHHHHhcCCCccceEEEEE-ECCCC
Confidence 45666553 4566778899999865432234555444 55443
No 82
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=25.05 E-value=4e+02 Score=22.10 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=45.0
Q ss_pred hhchHHHHHHHHHhcCCCCcEEEEEEeCCCCchHHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhHHH
Q 018567 79 LRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDANNLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYARN 158 (354)
Q Consensus 79 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~Rl 158 (354)
...+..++.|+++.+- .++.+.|+.++..+ ...+.+++ +.. +...+ +.... .+ ...++.
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~evivvDd~s~d--~~~~~~~~-~~~-~~~~~-~~~~~-~g-------------~~~a~n 68 (202)
T cd06433 10 AETLEETIDSVLSQTY--PNIEYIVIDGGSTD--GTVDIIKK-YED-KITYW-ISEPD-KG-------------IYDAMN 68 (202)
T ss_pred HHHHHHHHHHHHhCCC--CCceEEEEeCCCCc--cHHHHHHH-hHh-hcEEE-EecCC-cC-------------HHHHHH
Confidence 4667788999987654 23666555555444 22333332 211 11111 11110 01 123333
Q ss_pred hhhhhcCCCCCeEEEEeccEEEecC-hHhhh
Q 018567 159 YLANLLPPCVHKVVYLDSDLVLVDD-ISKLA 188 (354)
Q Consensus 159 ~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~ 188 (354)
..-+.-. -+-|++||+|.++..+ +..+.
T Consensus 69 ~~~~~a~--~~~v~~ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 69 KGIALAT--GDIIGFLNSDDTLLPGALLAVV 97 (202)
T ss_pred HHHHHcC--CCEEEEeCCCcccCchHHHHHH
Confidence 3333332 5889999999988765 66665
No 83
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=20.46 E-value=4.9e+02 Score=21.45 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=48.7
Q ss_pred hhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccchhcccCCcchhHH
Q 018567 79 LRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIRSALDCPLNYAR 157 (354)
Q Consensus 79 l~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~~~~~~~~~y~R 157 (354)
...+.-++.|+.+.........+.|+.++..+. .+..+.....++.+ +++....+ . + + ..++
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~--~~~~~~~n-~-G-~------------~~a~ 71 (185)
T cd04179 9 EENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRV--RVIRLSRN-F-G-K------------GAAV 71 (185)
T ss_pred HhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCCCe--EEEEccCC-C-C-c------------cHHH
Confidence 356677888998876422356666666665441 12222222334432 33322211 0 1 0 1223
Q ss_pred HhhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 158 NYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 158 l~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
....+.-. -+-+++||+|.++..+ |..|...
T Consensus 72 n~g~~~a~--gd~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 72 RAGFKAAR--GDIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred HHHHHHhc--CCEEEEEeCCCCCCHHHHHHHHHH
Confidence 33223333 2789999999888776 6677764
No 84
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=20.41 E-value=5.8e+02 Score=24.11 Aligned_cols=110 Identities=24% Similarity=0.317 Sum_probs=55.4
Q ss_pred CCCceEEEEEeC--ccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch----HHHHHHHHhh---------CCCeeEE
Q 018567 64 SAEAIHVAMTLD--APYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN----NLLHETISHS---------FPSLSFQ 128 (354)
Q Consensus 64 ~~~~i~I~~~~D--~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~----~~l~~~l~~~---------~p~~~~~ 128 (354)
..+.|=|+.... ..|+..-.-.|.|+ .-+ .+.+.+-+++++.++. +.+.+.+.+. |. ++.
T Consensus 23 ~~e~VLILtplrna~~~l~~y~~~L~~L--~YP-~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~--~it 97 (269)
T PF03452_consen 23 NKESVLILTPLRNAASFLPDYFDNLLSL--TYP-HELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFR--SIT 97 (269)
T ss_pred cCCeEEEEEecCCchHHHHHHHHHHHhC--CCC-chheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcc--eEE
Confidence 445666666663 33666666666666 333 2568888888887741 2344333221 22 233
Q ss_pred EEEcCCcccccccccchh------cccCCcchhHHHh-hhhhcCCCCCeEEEEeccEE
Q 018567 129 IYPFDDTAVSGLISTSIR------SALDCPLNYARNY-LANLLPPCVHKVVYLDSDLV 179 (354)
Q Consensus 129 ~~~~d~~~~~~~is~~~~------~~~~~~~~y~Rl~-l~~llp~~v~RvLYLDsD~I 179 (354)
+..=|.....+ .+.+.| +....-++-+|.+ +..-|....+-|++||+|++
T Consensus 98 Il~~df~~~~~-~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv 154 (269)
T PF03452_consen 98 ILRKDFGQQLS-QDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIV 154 (269)
T ss_pred EEcCCCccccc-CchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcc
Confidence 32212111101 111111 0111124556665 33445546899999999999
No 85
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=20.38 E-value=1.4e+02 Score=26.02 Aligned_cols=105 Identities=16% Similarity=0.176 Sum_probs=47.0
Q ss_pred eEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccchh
Q 018567 68 IHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSIR 146 (354)
Q Consensus 68 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~~ 146 (354)
|-|++.+= +-...+.-++.|++...- .++.++|+.++.++. .+..+.+.+.+|...+++.....+. + . ...
T Consensus 3 v~Vvip~~-~~~~~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~--g-~-~~k- 74 (228)
T PF13641_consen 3 VSVVIPAY-NEDDVLRRCLESLLAQDY--PRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNP--G-P-GGK- 74 (228)
T ss_dssp EEEE--BS-S-HHHHHHHHHHHTTSHH--HTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----H--H-H-HHH-
T ss_pred EEEEEEec-CCHHHHHHHHHHHHcCCC--CCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCC--C-c-chH-
Confidence 44555441 223356668888886432 358888888765542 1222334445776566654422110 0 0 000
Q ss_pred cccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhc
Q 018567 147 SALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAA 189 (354)
Q Consensus 147 ~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~ 189 (354)
.-++...-+... .+-|++||+|+++-.| |.++.+
T Consensus 75 -------~~a~n~~~~~~~--~d~i~~lD~D~~~~p~~l~~~~~ 109 (228)
T PF13641_consen 75 -------ARALNEALAAAR--GDYILFLDDDTVLDPDWLERLLA 109 (228)
T ss_dssp -------HHHHHHHHHH-----SEEEEE-SSEEE-CHHHHHHHH
T ss_pred -------HHHHHHHHHhcC--CCEEEEECCCcEECHHHHHHHHH
Confidence 001111112222 6899999999999554 444443
No 86
>PRK10073 putative glycosyl transferase; Provisional
Probab=20.06 E-value=7.7e+02 Score=23.52 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=57.7
Q ss_pred ceEEEEEeCccchhchHHHHHHHHHhcCCCCcEEEEEEeCCCCch-HHHHHHHHhhCCCeeEEEEEcCCcccccccccch
Q 018567 67 AIHVAMTLDAPYLRGSMAAIHSVLQHSSCPQNVLFHFVSSDKDAN-NLLHETISHSFPSLSFQIYPFDDTAVSGLISTSI 145 (354)
Q Consensus 67 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~is~~~ 145 (354)
.+-|++.+= |-...+.-++.||+..+- .++.+.|+.|+.+++ .++.+...+..+. +++.. .+ .. +
T Consensus 7 ~vSVIIP~y-N~~~~L~~~l~Sl~~Qt~--~~~EIIiVdDgStD~t~~i~~~~~~~~~~--i~vi~--~~--n~----G- 72 (328)
T PRK10073 7 KLSIIIPLY-NAGKDFRAFMESLIAQTW--TALEIIIVNDGSTDNSVEIAKHYAENYPH--VRLLH--QA--NA----G- 72 (328)
T ss_pred eEEEEEecc-CCHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCccHHHHHHHHHhhCCC--EEEEE--CC--CC----C-
Confidence 467777663 334667778999998764 367887887777652 2222223333443 33332 11 11 1
Q ss_pred hcccCCcchhHHHhhhhhcCCCCCeEEEEeccEEEecC-hHhhhcc
Q 018567 146 RSALDCPLNYARNYLANLLPPCVHKVVYLDSDLVLVDD-ISKLAAT 190 (354)
Q Consensus 146 ~~~~~~~~~y~Rl~l~~llp~~v~RvLYLDsD~IV~~D-I~~L~~~ 190 (354)
.+.+|-..-+.-. =+-|+++|+|-.+..+ ++.|.+.
T Consensus 73 -------~~~arN~gl~~a~--g~yi~flD~DD~~~p~~l~~l~~~ 109 (328)
T PRK10073 73 -------VSVARNTGLAVAT--GKYVAFPDADDVVYPTMYETLMTM 109 (328)
T ss_pred -------hHHHHHHHHHhCC--CCEEEEECCCCccChhHHHHHHHH
Confidence 1344444334343 3789999999988766 4455553
Done!