Query         018568
Match_columns 354
No_of_seqs    254 out of 1692
Neff          8.3 
Searched_HMMs 13730
Date          Mon Mar 25 17:18:50 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018568.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018568hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1cs8a_ d.3.1.1 (A:) (Pro)cath 100.0 1.6E-66 1.1E-70  488.9  25.4  287   18-332    15-314 (316)
  2 d1xkga1 d.3.1.1 (A:4-305) Majo 100.0 3.8E-65 2.8E-69  476.3  18.3  272   23-333    13-298 (302)
  3 d1gmya_ d.3.1.1 (A:) (Pro)cath 100.0 6.7E-61 4.9E-65  436.7  19.8  239   97-336     1-254 (254)
  4 g1k3b.1 d.3.1.1 (B:,C:) Cathep 100.0   6E-57 4.4E-61  405.1  21.4  222   98-337     1-232 (233)
  5 g8pch.1 d.3.1.1 (P:,A:) Cathep 100.0 4.1E-57   3E-61  405.3  19.9  217   95-336     6-228 (228)
  6 d1deua_ d.3.1.1 (A:) (Pro)cath 100.0 1.3E-56 9.3E-61  413.3  20.0  229   95-336    31-275 (275)
  7 d1m6da_ d.3.1.1 (A:) Cathepsin 100.0 9.5E-56 6.9E-60  392.7  20.0  208   99-335     2-214 (214)
  8 d1ppoa_ d.3.1.1 (A:) Caricain  100.0 4.3E-55 3.1E-59  388.9  20.6  206   98-332     1-213 (216)
  9 d1yala_ d.3.1.1 (A:) Chymopapa 100.0 5.4E-55   4E-59  388.9  21.1  208   98-333     1-214 (218)
 10 d1cqda_ d.3.1.1 (A:) Proline-s 100.0   6E-55 4.4E-59  387.7  21.3  209   98-335     1-216 (216)
 11 d1me4a_ d.3.1.1 (A:) Cruzain { 100.0 1.7E-54 1.2E-58  384.8  23.2  208   99-333     2-213 (215)
 12 d2oula1 d.3.1.1 (A:-16-224) Fa 100.0 4.3E-55 3.1E-59  395.6  19.2  208   97-332    17-238 (241)
 13 d2h7ja1 d.3.1.1 (A:1-217) (Pro 100.0 9.6E-55   7E-59  386.7  21.1  209   98-332     1-215 (217)
 14 d2r6na1 d.3.1.1 (A:1-215) (Pro 100.0 3.3E-54 2.4E-58  383.0  21.2  206   99-332     2-213 (215)
 15 d1fh0a_ d.3.1.1 (A:) (Pro)cath 100.0   3E-54 2.2E-58  384.3  20.9  210   98-332     1-219 (221)
 16 d1aeca_ d.3.1.1 (A:) Actinidin 100.0   4E-54 2.9E-58  383.0  18.8  210   98-333     1-216 (218)
 17 d1s4va_ d.3.1.1 (A:) Vignain ( 100.0 2.3E-53 1.7E-57  379.5  21.8  215   97-338     1-223 (224)
 18 d1khqa_ d.3.1.1 (A:) Papain {P 100.0 5.8E-53 4.2E-57  373.5  21.7  204   98-333     1-210 (212)
 19 d1iwda_ d.3.1.1 (A:) Ervatamin 100.0 2.7E-52 1.9E-56  370.5  20.6  207   98-334     1-214 (215)
 20 d1o0ea_ d.3.1.1 (A:) Ervatamin 100.0 6.1E-52 4.4E-56  366.2  21.4  200   98-332     1-205 (208)
 21 d3gcba_ d.3.1.1 (A:) Bleomycin  99.7   8E-18 5.8E-22  161.0  15.5  205  114-319    66-414 (458)
 22 d2cb5a_ d.3.1.1 (A:) Bleomycin  99.6 1.5E-15 1.1E-19  144.5  15.9   79  114-192    60-167 (453)
 23 d1pxva_ d.3.1.1 (A:) Staphopai  96.2   0.051 3.7E-06   42.5  12.6   69  238-324    98-167 (183)
 24 d1cv8a_ d.3.1.1 (A:) Staphopai  96.2    0.16 1.2E-05   39.1  15.4  133  119-323    16-156 (173)
 25 d1dkia_ d.3.1.1 (A:) Streptoco  70.9     2.4 0.00017   37.0   5.2   52  240-317   254-307 (335)
 26 d2nn6h3 d.51.1.1 (H:168-293) R  28.6       8 0.00058   28.4   0.9   13  308-320    30-42  (126)
 27 d1is3a_ b.29.1.3 (A:) Congerin  24.3     7.9 0.00057   28.6   0.1   14  297-310    55-70  (134)
 28 d1ziva1 d.3.1.3 (A:28-337) Cal  22.8      72  0.0053   26.4   6.4   70  240-318   191-294 (310)

No 1  
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-66  Score=488.88  Aligned_cols=287  Identities=26%  Similarity=0.477  Sum_probs=229.5

Q ss_pred             HHhhcccccccccccccccccHHH--HHHHHHcC---CCCCeEEecCCCCCCCCHHHHHHhhCCCCCCCCCCCCCCcccc
Q 018568           18 ISSQTFAEGVVSKLKLDSHILQDS--IIKEVNEN---PKAGWKAARNPQFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTH   92 (354)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~N~~---~~~~~~~~~N~~Fsd~t~~Ef~~~~~~~~~~~~~~~~~~~~~~   92 (354)
                      ....+.+.+...|...|+.+|.++  .|++||++   .+.+|++++| +|+|||.+||++++.....+.......  ...
T Consensus        15 f~~~~~K~Y~~~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N-~fsDlt~eEf~~~~~~~~~~~~~~~~~--~~~   91 (316)
T d1cs8a_          15 WKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMN-AFGDMTSEEFRQVMNGFQNRKPRKGKV--FQE   91 (316)
T ss_dssp             HHHHTTCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCC-TTTTCCHHHHHHHHCCBCCCCCSCCEE--CCC
T ss_pred             HHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEece-eccccCcHHHHhhhccccccccccCcc--ccC
Confidence            344455666667888899999985  69999974   4569999999 999999999999766543332222111  122


Q ss_pred             cCCCCCCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchH
Q 018568           93 DKSLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPI  172 (354)
Q Consensus        93 ~~~~~lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~  172 (354)
                      +...+||++||||++    |+++||||||.||||||||+++++|++++++++..+.||+|+|+||.....+.+|.||++.
T Consensus        92 ~~~~~lP~s~Dwr~~----g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~~~c~gg~~~  167 (316)
T d1cs8a_          92 PLFYEAPRSVDWREK----GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMD  167 (316)
T ss_dssp             CTTCCCCSCEEGGGG----TCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHH
T ss_pred             cccccCCCceECCcC----CcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccCCCCCCCchH
Confidence            345689999999987    8899999999999999999999999999999999999999999999864456789999999


Q ss_pred             HHHHHHHHcC-ccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE-eCCCHHHHHHHHHHcC
Q 018568          173 SAWRYFVHHG-VVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNG  250 (354)
Q Consensus       173 ~a~~~~~~~G-i~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~g  250 (354)
                      .|++|++.+| +..|..+||....                 ..|.....    .....+..+. ...+++.|+++|+.+|
T Consensus       168 ~a~~y~~~~g~~~~e~~~~~~~~~-----------------~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~l~~~g  226 (316)
T d1cs8a_         168 YAFQYVQDNGGLDSEESYPYEATE-----------------ESCKYNPK----YSVANDAGFVDIPKQEKALMKAVATVG  226 (316)
T ss_dssp             HHHHHHHHHTCEEBTTTSCCCSSC-----------------CCCCCCGG----GEEECCCCEEECCSCHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCcccccccccccccc-----------------cccccccc----cccccccccccccCcHHHHHHHHHHhC
Confidence            9999999997 5677778885431                 12221111    1223344444 5668899999999999


Q ss_pred             CEEEEEEec-ccccccCCceeecCCC-CccCCeeEEEEEeCCC---CCCccEEEEEccCCCCCCCCceEEEEccC-Cccc
Q 018568          251 PVEVSFTVY-EDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTS---DDGEDYWILANQWNRSWGADGYFKIKRGS-NECG  324 (354)
Q Consensus       251 PV~v~~~~~-~~f~~y~~Giy~~~~~-~~~~~Hav~iVGyg~~---~~g~~ywivkNSWG~~WG~~Gy~~i~~g~-n~cg  324 (354)
                      ||++++.+. .+|.+|++|||..+.+ ...++|||+|||||.+   .++.+|||||||||++|||+|||||+||. |.||
T Consensus       227 pv~v~i~~~~~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~n~CG  306 (316)
T d1cs8a_         227 PISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCG  306 (316)
T ss_dssp             CEEEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGG
T ss_pred             CeEEEEEeccchhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCCCcCc
Confidence            999999986 6799999999987755 3457999999999843   46889999999999999999999999985 8999


Q ss_pred             cccceeEe
Q 018568          325 IEEDVVAG  332 (354)
Q Consensus       325 I~~~~~~~  332 (354)
                      |++.++.+
T Consensus       307 I~~~~~yP  314 (316)
T d1cs8a_         307 IASAASYP  314 (316)
T ss_dssp             TTTSCEEE
T ss_pred             cCCeeeee
Confidence            99987654


No 2  
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]}
Probab=100.00  E-value=3.8e-65  Score=476.29  Aligned_cols=272  Identities=24%  Similarity=0.425  Sum_probs=210.0

Q ss_pred             cccc-ccccccccccccHHH--HHHHHHcCCCCCeEEecCCCCCCCCHHHHHHhhCCCCCCC-CC----CCCCCcccccC
Q 018568           23 FAEG-VVSKLKLDSHILQDS--IIKEVNENPKAGWKAARNPQFSNYTVGQFKHLLGVKPTPK-GL----LLGVPVKTHDK   94 (354)
Q Consensus        23 ~~~~-~~~~~~~~~~~~~~~--~i~~~N~~~~~~~~~~~N~~Fsd~t~~Ef~~~~~~~~~~~-~~----~~~~~~~~~~~   94 (354)
                      .+.+ +..|...|+.+|.++  .|++||.        ++| +|+|||.+||++++....... ..    ....+......
T Consensus        13 ~K~Y~~~~e~~~r~~if~~N~~~I~~~n~--------~~N-~fsDlt~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (302)
T d1xkga1          13 NKSYATFEDEEAARKNFLESVKYVQSNGG--------AIN-HLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSI   83 (302)
T ss_dssp             TCCCSSHHHHHHHHHHHHHHHHHHHHHCC--------CCC-TTTTSCHHHHHHHHSBCHHHHHHHHHHHC-----CBCCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcc--------CCC-cCCCCCHHHHHHHhcCCCcccccccccCCCCcccccccc
Confidence            3444 345667788888875  5677664        789 999999999987443221110 00    00011111233


Q ss_pred             CCCCCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHH
Q 018568           95 SLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISA  174 (354)
Q Consensus        95 ~~~lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a  174 (354)
                      ..++|++||||++    |+||||||||.||||||||+++++|++++++++..+.||+|+|+||..   +.+|.||++..|
T Consensus        84 ~~~~P~~~DwR~~----g~vtpVkdQG~CGsCwAfa~~~~lE~~~~i~~~~~~~lS~q~lvdC~~---~~~C~gG~~~~a  156 (302)
T d1xkga1          84 NGNAPAEIDLRQM----RTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS---QHGCHGDTIPRG  156 (302)
T ss_dssp             CSCCCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHH
T ss_pred             CCCCCcceecccc----CccccceeccccceehhhhhHHhHHHHHHHhcCCcccchhHHHHhccc---cCccCCCccchh
Confidence            4689999999987    789999999999999999999999999999999999999999999985   578999999999


Q ss_pred             HHHHHHcCccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE--eCCCHHHHHHHHHHcC-C
Q 018568          175 WRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR--INSDPEDIMAEIYKNG-P  251 (354)
Q Consensus       175 ~~~~~~~Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~--~~~~~~~ik~~l~~~g-P  251 (354)
                      ++|+.++|+++|++|||...                 ...|....     ...+.+..|.  ...++++|+++++..+ |
T Consensus       157 ~~~~~~~Gi~~e~~yPY~~~-----------------~~~C~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  214 (302)
T d1xkga1         157 IEYIQHNGVVQESYYRYVAR-----------------EQSCRRPN-----AQRFGISNYCQIYPPNANKIREALAQTHSA  214 (302)
T ss_dssp             HHHHHHHCEEBGGGSCCCSS-----------------CCCCCCCS-----SCEECCSEEEECCSCCHHHHHHHHHHHCCC
T ss_pred             hhhhccCcccchhhcccccc-----------------cccccccc-----cccceeeeeeeecCchHHHHHHhhhhcccc
Confidence            99999999999999999654                 12333222     2234455555  4568889999998754 4


Q ss_pred             EEEEEEe--cccccccCCceeecCCC-CccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccCCccccccc
Q 018568          252 VEVSFTV--YEDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEED  328 (354)
Q Consensus       252 V~v~~~~--~~~f~~y~~Giy~~~~~-~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~  328 (354)
                      +++.+.+  ...|++|++||+..+++ ...++|||+||||| +++|++|||||||||++|||+|||||+||.|.|||+++
T Consensus       215 ~~~~~~~~~~~~~~~y~~gi~~~~~~~~~~~~HaV~iVGyg-~~~g~~YWivkNSWG~~WGe~GY~~i~~~~n~cgi~~~  293 (302)
T d1xkga1         215 IAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYS-NAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEY  293 (302)
T ss_dssp             EEEEEEESCHHHHHTCCSSSCBCCCCSSCCEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTC
T ss_pred             cceeecccccchhhccccceeecCCCCCCcCCEEEEEEEEe-ccCCeEEEEEEcCCCCchhcCCEEEEECCCCeeccCCC
Confidence            4544444  35788999998866544 45568999999999 77889999999999999999999999999999999999


Q ss_pred             eeEee
Q 018568          329 VVAGL  333 (354)
Q Consensus       329 ~~~~~  333 (354)
                      ++.++
T Consensus       294 ~~~~~  298 (302)
T d1xkga1         294 PYVVI  298 (302)
T ss_dssp             CEEEE
T ss_pred             cEEEE
Confidence            98875


No 3  
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.7e-61  Score=436.70  Aligned_cols=239  Identities=53%  Similarity=1.138  Sum_probs=191.9

Q ss_pred             CCCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCccccHHHHHHhcCCCCCCCCCCCchHHH
Q 018568           97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNDLLACCGFLCGDGCDGGYPISA  174 (354)
Q Consensus        97 ~lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~--~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a  174 (354)
                      +||++||||+.|+++++||||||||.||||||||++++||++++++++  ....||+|+|++|.....+.||.||++..|
T Consensus         1 ~lP~~~D~R~~w~~~~~vtpV~dQg~cGsCwAfA~~~~lEs~~~i~~~~~~~~~lS~~~l~~~~~~~~~~gc~gg~~~~a   80 (254)
T d1gmya_           1 KLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEA   80 (254)
T ss_dssp             CCCSSEEHHHHSTTCGGGGCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSSCCCBCHHHHHHHSGGGGBCGGGCBCHHHH
T ss_pred             CCCcCCcchhhcCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHCCCCccccchHHHHhhccccCCCCCCCCcHHHH
Confidence            599999999999999999999999999999999999999999999987  457899999999976455689999999999


Q ss_pred             HHHHHHcCccCCCcccCCCC-CCCCCCCC-----------CCCCCCccccccccccccc-cccCceeEeeeeEeCCCHHH
Q 018568          175 WRYFVHHGVVTEECDPYFDS-TGCSHPGC-----------EPAYPTPKCVRKCVKKNQL-WRNSKHYSISAYRINSDPED  241 (354)
Q Consensus       175 ~~~~~~~Gi~~e~~yPY~~~-~~~~~~~~-----------~~~~~~~~~~~~c~~~~~~-~~~~~~~~i~~~~~~~~~~~  241 (354)
                      ++++.++|+++|+.||+... ..+..+.|           ......+.....|...... +...+......+....+++.
T Consensus        81 ~~~~~~~G~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (254)
T d1gmya_          81 WNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKD  160 (254)
T ss_dssp             HHHHHHTCBCBCCSTTCCCSSSCCCSCCCBSSSCCSSCBCCSCCCCCCCCCSCCTTCCSCHHHHCBCBSCCEECCSCHHH
T ss_pred             HHHHHHcCccccccccccccccccccccccccccCccCccccccCCccccccccCCcccceeeeeeeeeeeeccccHHHH
Confidence            99999999999999987432 11112221           1111111111112211110 11112222233334567899


Q ss_pred             HHHHHHHcCCEEEEEEecccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccCC
Q 018568          242 IMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN  321 (354)
Q Consensus       242 ik~~l~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n  321 (354)
                      ||++|+++|||++++.+.++|+.|++||+..++....++|||+||||| ++++.+|||||||||++||++|||||+||.|
T Consensus       161 ik~~l~~~gpv~~~~~~~~~f~~y~~gi~~~~~~~~~~~Hav~IVGyg-~~~g~~ywIvkNSWG~~WGd~GYf~i~~~~n  239 (254)
T d1gmya_         161 IMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWG-VENGTPYWLVANSWNTDWGDNGFFKILRGQD  239 (254)
T ss_dssp             HHHHHHHHCCEEEEEEEEGGGTTCCSSEECCCSCCEEEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSC
T ss_pred             HHHHHHHcCCEEEEEEeechhhhccCCccccccccccccEEEEEEEEe-ccCCceEEEEEcCCCCCcCCCceEEEEcCCC
Confidence            999999999999999999999999999998888877889999999999 6778999999999999999999999999999


Q ss_pred             ccccccceeEeeccC
Q 018568          322 ECGIEEDVVAGLPSS  336 (354)
Q Consensus       322 ~cgI~~~~~~~~p~~  336 (354)
                      .|||++++++++|+.
T Consensus       240 ~cgi~~~~~~~~p~~  254 (254)
T d1gmya_         240 HCGIESEVVAGIPRT  254 (254)
T ss_dssp             GGGTTTSCEECCBCC
T ss_pred             ccCcCCceEeccCCC
Confidence            999999999999973


No 4  
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6e-57  Score=405.07  Aligned_cols=222  Identities=36%  Similarity=0.755  Sum_probs=176.8

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCccccHHHHHHhcCCCCCCCCCCCchH-HH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFG--MNLSLSVNDLLACCGFLCGDGCDGGYPI-SA  174 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~--~~~~lS~q~l~~c~~~~~~~gc~GG~~~-~a  174 (354)
                      ||++||||+. .+.++||||||||.||||||||++++||++++++++  ....||+|+|++|..  ...+|.||... .+
T Consensus         1 LP~~~DwR~~-~~~~~vtpVkdQG~cGsCwAfA~~~~ie~~~~i~~~~~~~~~lS~q~l~~c~~--~~~~~~gg~~~~~~   77 (233)
T g1k3b.1           1 LPTSWDWRNV-HGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIA   77 (233)
T ss_dssp             CCSCEETTCB-TTBCCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHT
T ss_pred             CCCCEeCCCC-CCCCCcCCCcccccchHHHHHHHHHHHHHHHHHHHCCCccccccHHHhhhhhc--ccccccCcccchhh
Confidence            8999999985 344679999999999999999999999999999887  556799999999986  34677777654 55


Q ss_pred             HHHHHHcCccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeEeCCCHHHHHHHHHHcCCEEE
Q 018568          175 WRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEV  254 (354)
Q Consensus       175 ~~~~~~~Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~l~~~gPV~v  254 (354)
                      +.++++.|+++|++|||.....    .|       .+...|..    ........+..|....++++||++|+++|||++
T Consensus        78 ~~~~~~~G~~~e~~~py~~~~~----~~-------~~~~~~~~----~~~~~~~~i~~~~~~~~~~~ik~~l~~~gPV~~  142 (233)
T g1k3b.1          78 GKYAQDFGLVEEACFPYTGTDS----PC-------KMKEDCFR----YYSSEYHYVGGFYGGCNEALMKLELVHHGPMAV  142 (233)
T ss_dssp             THHHHHTCBCBTTTSCCCSSCC----CS-------CCCSSCCC----BCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEE
T ss_pred             hHHhhcccccccccCCcccccC----cc-------cccccccc----eeeeeeeccCCccCCCHHHHHHHHHHHcCceEE
Confidence            6899999999999999965311    00       00001110    011122233334345678999999999999999


Q ss_pred             EEEecccccccCCceeecCCC------CccCCeeEEEEEeCCCC-CCccEEEEEccCCCCCCCCceEEEEccCCcccccc
Q 018568          255 SFTVYEDFAHYKSGVYKHITG------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEE  327 (354)
Q Consensus       255 ~~~~~~~f~~y~~Giy~~~~~------~~~~~Hav~iVGyg~~~-~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~  327 (354)
                      +|.++.+|.+|++|||..+.+      ...++|||+|||||++. ++++|||||||||++||++|||||+||.|.|||++
T Consensus       143 ~i~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgi~~  222 (233)
T g1k3b.1         143 AFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIES  222 (233)
T ss_dssp             EECCCHHHHTCCSSEECCCCCCCCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTS
T ss_pred             EEEccchhhccCCceecCCCcccccCCCcccceEEEEEeecccCCCCCeEEEEEcCCCCCcCCCcEEEEECCCCcccCCC
Confidence            999999999999999976532      23479999999999533 57789999999999999999999999999999999


Q ss_pred             ceeEeeccCC
Q 018568          328 DVVAGLPSSK  337 (354)
Q Consensus       328 ~~~~~~p~~~  337 (354)
                      .+++++|..+
T Consensus       223 ~~~~~~p~~~  232 (233)
T g1k3b.1         223 IAVAATPIPK  232 (233)
T ss_dssp             CCEEEEECCC
T ss_pred             ceeecccCCC
Confidence            9999999764


No 5  
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]}
Probab=100.00  E-value=4.1e-57  Score=405.28  Aligned_cols=217  Identities=32%  Similarity=0.642  Sum_probs=180.1

Q ss_pred             CCCCCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHH
Q 018568           95 SLKLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISA  174 (354)
Q Consensus        95 ~~~lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a  174 (354)
                      ...||++||||+++   ..||||||||.||+|||||+++++|++++++++....||+|+|++|.....+.+|.||.+..+
T Consensus         6 ~~~~P~~~DwR~~~---~~vtpV~dQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~~c~~~~~~~~~~gg~~~~~   82 (228)
T g8pch.1           6 SATYPPSMDWRKKG---NFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQA   82 (228)
T ss_dssp             ---CCSCEEHHHHS---SCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHH
T ss_pred             cCCCCCCEEcccCC---CCCCCCCcCCCchhHHHHHHHHHHHHHHHHHhCCCCccchhhhhhhccccCCCCCCCCcchhh
Confidence            46799999999872   258999999999999999999999999999999999999999999986455678999999999


Q ss_pred             HHHHHHc-CccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE--eCCCHHHHHHHHHHcCC
Q 018568          175 WRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR--INSDPEDIMAEIYKNGP  251 (354)
Q Consensus       175 ~~~~~~~-Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~--~~~~~~~ik~~l~~~gP  251 (354)
                      +.++.+. |+++++.|||.+...                 .|.....    .....+..+.  ...+.+.||++|+.+||
T Consensus        83 ~~~~~~~~g~~~~~~yp~~~~~~-----------------~~~~~~~----~~~~~~~~~~~~~~~~~~~~k~~l~~~gP  141 (228)
T g8pch.1          83 FEYIRYNKGIMGEDTYPYKGQDD-----------------HCKFQPD----KAIAFVKDVANITMNDEEAMVEAVALYNP  141 (228)
T ss_dssp             HHHHHHHTCEEBTTTSCCCSSCC-----------------CCCCCGG----GEEECEEEEEECCTTCHHHHHHHHHHTCC
T ss_pred             hhhhhccceeccccccCcccccc-----------------ccccccc----cceeEEeeeeeecCCcHHHhhhcccccCC
Confidence            9988775 789999999954311                 1111110    1112223333  45678999999999999


Q ss_pred             EEEEEEecccccccCCceeecCCC---CccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccCCccccccc
Q 018568          252 VEVSFTVYEDFAHYKSGVYKHITG---DVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEED  328 (354)
Q Consensus       252 V~v~~~~~~~f~~y~~Giy~~~~~---~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~  328 (354)
                      |+++|.+.++|..|++|||..+.+   ...++|||+||||| ++++.+|||||||||++||++|||||+||.|.|||+++
T Consensus       142 v~~~~~v~~~f~~~~~gv~~~~~~~~~~~~~~Hav~iVGyg-~~~g~~ywivrNSWG~~WG~~Gy~~i~~g~n~cgi~~~  220 (228)
T g8pch.1         142 VSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYG-EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAAC  220 (228)
T ss_dssp             EEEEECCCHHHHTCCSSEECCSSCCCSTTTCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTS
T ss_pred             cEEEEEeehhhhccCCceeeCCCccccccccceEEEEEEcc-ccCCceEEEEECCCCCCcccCCEEEEEcCCCcccCccc
Confidence            999999999999999999987653   34589999999999 66789999999999999999999999999999999999


Q ss_pred             eeEeeccC
Q 018568          329 VVAGLPSS  336 (354)
Q Consensus       329 ~~~~~p~~  336 (354)
                      +++++|.+
T Consensus       221 ~~~p~~~~  228 (228)
T g8pch.1         221 ASYPIPLV  228 (228)
T ss_dssp             CEEEEECC
T ss_pred             ceeccccC
Confidence            99999964


No 6  
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-56  Score=413.29  Aligned_cols=229  Identities=33%  Similarity=0.661  Sum_probs=186.4

Q ss_pred             CCCCCCccccCcCCCCCCCcCccCCCC---CCCcHHHHHHHHHHHHHHHHHcC---CCccccHHHHHHhcCCCCCCCCCC
Q 018568           95 SLKLPKSFDARSAWPQCSTISRILDQG---HCGSCWAFGAVEALSDRFCIHFG---MNLSLSVNDLLACCGFLCGDGCDG  168 (354)
Q Consensus        95 ~~~lP~s~D~R~~w~~~~~v~pV~dQg---~cGsCwAfA~~~~le~~~~i~~~---~~~~lS~q~l~~c~~~~~~~gc~G  168 (354)
                      ..+||++||||+.+ ..++++||||||   .||||||||+++++|++++++++   ....||+|+|++|..   ..+|.|
T Consensus        31 ~~~LP~~~DwR~~~-~~~~~tpvkdQG~~~~CGsCWAfAa~~~lE~~~~i~~~~~~~~~~lS~q~l~~~~~---~~~c~G  106 (275)
T d1deua_          31 PADLPKSWDWRNVD-GVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEG  106 (275)
T ss_dssp             GGGSCSCEETTSBT-TBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBE
T ss_pred             cccCCCccccCcCC-CcCCCCCcccCCCCCCCcCHHHHHHHHHHHHHHHHHcCCcccccccchhheecccc---ccccCC
Confidence            35799999999973 345689999999   69999999999999999999876   446799999999986   468999


Q ss_pred             CchHHHHHHHHHcCccCCCcccCCCCCCCCCCCCCCCCCCccccccccccc--cccccCceeEeeeeEeCCCHHHHHHHH
Q 018568          169 GYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKN--QLWRNSKHYSISAYRINSDPEDIMAEI  246 (354)
Q Consensus       169 G~~~~a~~~~~~~Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~--~~~~~~~~~~i~~~~~~~~~~~ik~~l  246 (354)
                      |++..+++|+.++|+++|++|||.....    .|.....    ...|....  ........+.+..|....+.+.||++|
T Consensus       107 G~~~~a~~~~~~~G~~~e~~~PY~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~e~ik~~l  178 (275)
T d1deua_         107 GNDLSVWDYAHQHGIPDETCNNYQAKDQ----ECDKFNQ----CGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEI  178 (275)
T ss_dssp             ECHHHHHHHHHHTCBCBGGGSCCCSSCC----CCCHHHH----SEEEEETTEEEECSSCCCBCEEEEEEECSHHHHHHHH
T ss_pred             cccccccchhhcccccccccccccccCC----Ccccccc----cCcccccceeeeccceeEEEeCceeecCcHHHHHHHH
Confidence            9999999999999999999999964411    0000000    01111111  011223455667777445678999999


Q ss_pred             HHcCCEEEEEEecccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccCCccc--
Q 018568          247 YKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECG--  324 (354)
Q Consensus       247 ~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cg--  324 (354)
                      +++|||+++|.+.++|++|++|||..+++...++|||+||||| ++++++|||||||||++|||+|||||+|+.++||  
T Consensus       179 ~~~GPv~v~~~~~~~f~~y~~Gi~~~~~~~~~~~HAV~IVGyg-~~~g~~ywivrNSWG~~WGd~Gyf~I~~~~~~~~~~  257 (275)
T d1deua_         179 YANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWG-ISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKG  257 (275)
T ss_dssp             HHHCCEEEEECCCHHHHTCCSSEECBCCSCCCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTG
T ss_pred             HhCCCcEEEEEeccchhccCCCcccCccccccCCeEEEEEEEe-ccCCcEEEEEECCCCCCcccCCEEEEECCCCCCCcc
Confidence            9999999999999999999999999888777789999999999 6678999999999999999999999999987765  


Q ss_pred             ------cccceeEeeccC
Q 018568          325 ------IEEDVVAGLPSS  336 (354)
Q Consensus       325 ------I~~~~~~~~p~~  336 (354)
                            ||+++++++|.+
T Consensus       258 ~~~~~~ie~~~~~~~p~~  275 (275)
T d1deua_         258 ARYNLAIEEHCTFGDPIV  275 (275)
T ss_dssp             GGTBTTTTSCEEEEEECC
T ss_pred             ccccccccCccEecCCcC
Confidence                  999999999974


No 7  
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.5e-56  Score=392.70  Aligned_cols=208  Identities=28%  Similarity=0.624  Sum_probs=170.9

Q ss_pred             CCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHHH
Q 018568           99 PKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYF  178 (354)
Q Consensus        99 P~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~~  178 (354)
                      |++||||++    ++||||||||.||||||||+++++|++++++++..++||+|++++|..  .+.+|.||.+..+++|+
T Consensus         2 P~~~D~R~~----~~vtpV~dQg~cGsCwAfa~~~~le~~~~~~~~~~~~~S~q~~~~c~~--~~~gc~G~~~~~~~~~~   75 (214)
T d1m6da_           2 PPEWDWRSK----GAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK--MDKACMGGLPSNAYSAI   75 (214)
T ss_dssp             CSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHH
T ss_pred             CCceeCCCC----CCCCCCccCCcCccHHHHHHHHHHHHHHHHHcCCCcccCHHHhccccc--cCCccCCCcchhhHHHH
Confidence            899999987    789999999999999999999999999999999999999999999986  35799999999999999


Q ss_pred             HHcC-ccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE-eCCCHHHHHHHHHHcCCEEEEE
Q 018568          179 VHHG-VVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSF  256 (354)
Q Consensus       179 ~~~G-i~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~~  256 (354)
                      ++.| ++.|.++||.+...                 .|.....    .....+..+. ...+.++||++|+++|||+++|
T Consensus        76 ~~~g~~~~e~~~py~~~~~-----------------~~~~~~~----~~~~~~~~~~~~~~~~~~ik~~i~~~gpv~~~~  134 (214)
T d1m6da_          76 KNLGGLETEDDYSYQGHMQ-----------------SCQFSAE----KAKVYIQDSVELSQNEQKLAAWLAKRGPISVAI  134 (214)
T ss_dssp             HHHTCBCBTTTSCCCSSCC-----------------CCCCCGG----GCCBCCSEEEECCSCHHHHHHHHHHHCCEEEEE
T ss_pred             HhCCcccccccccccCccC-----------------ccccccc----ccceeeecccccccCHHHHHHHHHhcCCeEEEE
Confidence            9987 77899999965411                 1111010    1112222333 4567899999999999999999


Q ss_pred             EecccccccCCceee--cC-CCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccCCccccccceeEee
Q 018568          257 TVYEDFAHYKSGVYK--HI-TGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL  333 (354)
Q Consensus       257 ~~~~~f~~y~~Giy~--~~-~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~~~~~  333 (354)
                      .+. +|.+|..|++.  .+ +....++|||+||||| ++++++|||||||||++|||+|||||+||.|+|||++.+.+++
T Consensus       135 ~~~-~~~~~~~g~~~~~~~~~~~~~~~HaV~iVGyg-~~~~~~ywivkNSWG~~WGd~Gy~~i~~g~n~cgI~~~~~~~~  212 (214)
T d1m6da_         135 NAF-GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYG-QRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAV  212 (214)
T ss_dssp             CTH-HHHHCCSSEECCCGGGSCTTCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEE
T ss_pred             EEE-ehhhccCCccccccCCCCCcccceeEEEEccc-ccCCceEEEEECCCCCccccCCEEEEEcCCCcccccceeeEEe
Confidence            985 45555555543  33 3345689999999999 6678899999999999999999999999999999999999988


Q ss_pred             cc
Q 018568          334 PS  335 (354)
Q Consensus       334 p~  335 (354)
                      ++
T Consensus       213 ~~  214 (214)
T d1m6da_         213 VD  214 (214)
T ss_dssp             CC
T ss_pred             cC
Confidence            74


No 8  
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]}
Probab=100.00  E-value=4.3e-55  Score=388.89  Aligned_cols=206  Identities=30%  Similarity=0.613  Sum_probs=167.5

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY  177 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~  177 (354)
                      ||++||||++    ++|+||||||.||||||||+++++|++++++++...+||+|+|++|..  ...+|.||+...++++
T Consensus         1 LP~~~Dwr~~----~~vtpV~dQg~cGsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~~~~~--~~~~~~G~~~~~~~~~   74 (216)
T d1ppoa_           1 LPENVDWRKK----GAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEY   74 (216)
T ss_dssp             CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHH
T ss_pred             CCCcccCCcC----CCCCCcccCCcCchHHHHHHHHHHHHHHHHHhCCCCCccHHHHhhhhh--ccCccccccccccccc
Confidence            8999999987    789999999999999999999999999999999999999999999986  3578999999999999


Q ss_pred             HHHcCccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE-eC-CCHHHHHHHHHHcCCEEEE
Q 018568          178 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVS  255 (354)
Q Consensus       178 ~~~~Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~-~~~~~ik~~l~~~gPV~v~  255 (354)
                      +++.|+++|++|||....                 ..|......   .....+..+. +. ..++.||++| .+|||+++
T Consensus        75 ~~~~G~~~e~~yPy~~~~-----------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l-~~gpv~~~  133 (216)
T d1ppoa_          75 VAKNGIHLRSKYPYKAKQ-----------------GTCRAKQVG---GPIVKTSGVGRVQPNNEGNLLNAI-AKQPVSVV  133 (216)
T ss_dssp             HHHHCBCBTTTSCCCSSC-----------------CCCCGGGCC---SCCBCCCEEEECCSSCHHHHHHHH-HHSCEEEE
T ss_pred             ccccCccccccCCccccc-----------------ccccccccc---ccceeeccceeecccHHHHHHHHH-hhCCCcee
Confidence            999999999999995431                 112111110   1111112222 33 3456666665 67899999


Q ss_pred             EEec-ccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccC----Ccccccccee
Q 018568          256 FTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVV  330 (354)
Q Consensus       256 ~~~~-~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~  330 (354)
                      +.+. +.|+.|++|+|..+.... ++|||+||||| ++++++|||||||||++||++|||||+|+.    |.|||+++++
T Consensus       134 ~~~~~~~~~~y~~g~~~~~~~~~-~~Hav~iVGyg-~~~~~~ywivrNSWG~~WGd~Gy~~i~~~~~~~~~~Cgi~~~~~  211 (216)
T d1ppoa_         134 VESKGRPFQLYKGGIFEGPCGTK-VDHAVTAVGYG-KSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSY  211 (216)
T ss_dssp             ECCCSHHHHHCCSSEECCSCCSC-CCEEEEEEEEE-EETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCE
T ss_pred             eeeccccceecCCcccccccccc-CCcEEEEEecc-ccCCCceEEEECCCCCCcccCCEEEEEcCCCCCCCcCccccEee
Confidence            9886 556789999998776544 69999999999 667899999999999999999999999986    5699999977


Q ss_pred             Ee
Q 018568          331 AG  332 (354)
Q Consensus       331 ~~  332 (354)
                      ..
T Consensus       212 ~p  213 (216)
T d1ppoa_         212 YP  213 (216)
T ss_dssp             EE
T ss_pred             ee
Confidence            53


No 9  
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]}
Probab=100.00  E-value=5.4e-55  Score=388.87  Aligned_cols=208  Identities=32%  Similarity=0.634  Sum_probs=172.9

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY  177 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~  177 (354)
                      .|++||||++    ++|+||||||.||||||||++++||++++++++....||+|+|++|..  .+.+|.|+.+..++.+
T Consensus         1 ~P~~~DwR~~----~~vtpV~dQg~cGsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~~c~~--~~~g~~g~~~~~~~~~   74 (218)
T d1yala_           1 YPQSIDWRAK----GAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQY   74 (218)
T ss_dssp             CCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred             CCCCEeCCCC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccchhhhhcccc--ccCCCcccccchhhhh
Confidence            4999999987    789999999999999999999999999999999999999999999986  3578999999999999


Q ss_pred             HHHcCccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE-eCCCHHHHHHHHHHcCCEEEEE
Q 018568          178 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSF  256 (354)
Q Consensus       178 ~~~~Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~~  256 (354)
                      +++.|++.|+++||.....             .+...+..       .....+..+. +..+.+.++++++.+|||++++
T Consensus        75 ~~~~g~~~e~~~py~~~~~-------------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~  134 (218)
T d1yala_          75 VANNGVHTSKVYPYQAKQY-------------KCRATDKP-------GPKVKITGYKRVPSNCETSFLGALANQPLSVLV  134 (218)
T ss_dssp             HHHHCBCBTTTSCCCSSCC-------------CCCGGGCC-------SCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEE
T ss_pred             hhhhcccccccCCcccccC-------------cccccccc-------ccceeeccceEeCCccHHHHHHHHHhCCceEEE
Confidence            9999999999999954310             00001111       1222333444 5555567777888999999999


Q ss_pred             Eec-ccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccC----CccccccceeE
Q 018568          257 TVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVA  331 (354)
Q Consensus       257 ~~~-~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~~  331 (354)
                      .+. +.|+.|++|||..+++.. ++|||+||||| ++++++|||||||||++||++|||||+|+.    |+|||++.++.
T Consensus       135 ~~~~~~~~~y~~Giy~~~~~~~-~~Hav~IVGyg-~~~g~~ywivkNSWG~~WGd~Gy~~I~~~~~~~~~~CGI~~~~~~  212 (218)
T d1yala_         135 EAGGKPFQLYKSGVFDGPCGTK-LDHAVTAVGYG-TSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYY  212 (218)
T ss_dssp             CCCSHHHHTCCSSEECCSCCSC-CCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEE
T ss_pred             Eecccchhhcccceeeeccccc-CCcEEEEEEee-ccCCceEEEEECCCCCCcccCCEEEEEccCCCCCCcCCccceeee
Confidence            986 467889999998876654 69999999999 667899999999999999999999999986    58999999887


Q ss_pred             ee
Q 018568          332 GL  333 (354)
Q Consensus       332 ~~  333 (354)
                      .+
T Consensus       213 p~  214 (218)
T d1yala_         213 PF  214 (218)
T ss_dssp             EE
T ss_pred             cc
Confidence            64


No 10 
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]}
Probab=100.00  E-value=6e-55  Score=387.71  Aligned_cols=209  Identities=33%  Similarity=0.690  Sum_probs=172.6

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY  177 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~  177 (354)
                      ||++||||++    ++|+||||||.||||||||++++||++++++++..+.||+|+|++|..  ...||.||++..|++|
T Consensus         1 LP~~~DwR~~----~~itpV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~~c~~--~~~gc~Gg~~~~a~~y   74 (216)
T d1cqda_           1 LPDSIDWREN----GAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTT--ANHGCRGGWMNPAFQF   74 (216)
T ss_dssp             CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred             CCCcccCCcC----CCCCCcccCCCCchHHHHHHHHHHHHHHHHHhCCCccccHHHhhhccc--ccCCCCCcchHHHHHH
Confidence            8999999987    789999999999999999999999999999999999999999999986  3579999999999999


Q ss_pred             HHHcCc-cCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE-eCCCHHHHHHHHHHcCCEEEE
Q 018568          178 FVHHGV-VTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVS  255 (354)
Q Consensus       178 ~~~~Gi-~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~  255 (354)
                      +.++|+ ..|++|||.+...                 .|....    ....+.+..|. ...+.+.+++.+...+||+++
T Consensus        75 ~~~~g~~~~e~~~p~~~~~~-----------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~  133 (216)
T d1cqda_          75 IVNNGGINSEETYPYRGQDG-----------------ICNSTV----NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVT  133 (216)
T ss_dssp             HHHHTSBCBTTTSCCCSSCC-----------------CCCSSS----CCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEE
T ss_pred             HHhcCCccccccCCcccccc-----------------cccccc----CCceeEeeeEEecCCcchhhHHHHhhcCCccee
Confidence            999875 5688899954311                 000000    01223344555 444556777888889999999


Q ss_pred             EEec-ccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccC----Ccccccccee
Q 018568          256 FTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVV  330 (354)
Q Consensus       256 ~~~~-~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~  330 (354)
                      +.+. .+|..|++|||.... ...++|||+||||| ++++++|||||||||++||++|||||+|+.    +.|||++++.
T Consensus       134 ~~~~~~~~~~y~~gi~~~~~-~~~~~Hav~iVGyg-~~~~~~~wiv~NSWG~~WGd~Gy~~i~~~~~~~~~~Cgi~~~~~  211 (216)
T d1cqda_         134 MDAAGRDFQLYRSGIFTGSC-NISANHALTVVGYG-TENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFAS  211 (216)
T ss_dssp             ECCCSHHHHTCCSSEECCCC-CCCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCE
T ss_pred             eeeecccccccccCcccccc-cccCCcceeeeccc-cccCCceEEEECCCCCccccCCEEEEEcCCCCCCCCCCccceee
Confidence            8876 678999999997654 44579999999999 667889999999999999999999999975    6899999999


Q ss_pred             Eeecc
Q 018568          331 AGLPS  335 (354)
Q Consensus       331 ~~~p~  335 (354)
                      ..+|+
T Consensus       212 ~p~~~  216 (216)
T d1cqda_         212 YPVKK  216 (216)
T ss_dssp             EEECC
T ss_pred             eeecC
Confidence            98775


No 11 
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Probab=100.00  E-value=1.7e-54  Score=384.83  Aligned_cols=208  Identities=29%  Similarity=0.599  Sum_probs=173.4

Q ss_pred             CCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHHH
Q 018568           99 PKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYF  178 (354)
Q Consensus        99 P~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~~  178 (354)
                      |++||||++    ++|+||||||.||||||||+++++|++++++++....||+|+|++|..  .+.+|.|+....++.++
T Consensus         2 P~~~DwR~~----~~vtpV~dQg~cGsCwAfa~~~~le~~~~i~~~~~~~ls~q~l~~c~~--~~~~~~g~~~~~~~~~~   75 (215)
T d1me4a_           2 PAAVDWRAR----GAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWI   75 (215)
T ss_dssp             CSEEEGGGT----TCCCCCCBCTTSSCHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT--TSCGGGCCCHHHHHHHH
T ss_pred             CCCeeCCCC----CCCCCCccCCcCccHHHHHHHHHHHHHHHHhcCCCcccchhhhhhhhc--CCCCCCCCcccccceee
Confidence            899999987    889999999999999999999999999999999999999999999986  35788888888888877


Q ss_pred             HHc---CccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE-eCCCHHHHHHHHHHcCCEEE
Q 018568          179 VHH---GVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEV  254 (354)
Q Consensus       179 ~~~---Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v  254 (354)
                      ...   |++++.+|||.....             .|...+....     ...+++..+. +..+.+.||++|+++|||++
T Consensus        76 ~~~~~~~~~~~~~ypy~~~~~-------------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ik~~i~~~gpv~~  137 (215)
T d1me4a_          76 VQENNGAVYTEDSYPYASGEG-------------ISPPCTTSGH-----TVGATITGHVELPQDEAQIAAWLAVNGPVAV  137 (215)
T ss_dssp             HHHSTTEEEBTTTSCCCCTTS-------------CCCCCCCSSC-----CEEEECCEEEECCSCHHHHHHHHHHHCCEEE
T ss_pred             eeccCCccccCcccCcccccc-------------cccccccccc-----ccceEeeeeeeccccHHHHHHHHHhcCceeE
Confidence            543   688999999954311             0011111100     2234555665 66788999999999999999


Q ss_pred             EEEecccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccCCccccccceeEee
Q 018568          255 SFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL  333 (354)
Q Consensus       255 ~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~cgI~~~~~~~~  333 (354)
                      ++.+. .|+.|++++|..+... .++|||+||||| ++++++|||||||||++|||+|||||+||+|+|||++++.+++
T Consensus       138 ~~~~~-~~~~~~~~~~~~~~~~-~~~Hav~IVGyg-~~~~~~ywivrNSWG~~WGd~Gy~~i~~g~n~cgI~~~~~~~~  213 (215)
T d1me4a_         138 AVDAS-SWMTYTGGVMTSCVSE-QLDHGVLLVGYN-DSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAV  213 (215)
T ss_dssp             EECCT-TGGGCCSSEECSCCCS-CCCEEEEEEEEE-SSSSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEE
T ss_pred             EEEee-eecccccccccCCccc-cceeEEEEEEcc-ccCCceEEEEEcCCCCCcccCCEEEEECCCCccccCCceeeEe
Confidence            99985 5888999999766544 469999999999 6788999999999999999999999999999999999999886


No 12 
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]}
Probab=100.00  E-value=4.3e-55  Score=395.56  Aligned_cols=208  Identities=28%  Similarity=0.618  Sum_probs=170.8

Q ss_pred             CCCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHH
Q 018568           97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR  176 (354)
Q Consensus        97 ~lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~  176 (354)
                      ..|++||||++    ++||||||||.||||||||++++||++++++++..++||+|+|++|..  ...+|.||....++.
T Consensus        17 ~~~~~~Dwr~~----~~vtpV~dQG~cGsCwAfA~~~~lE~~~~i~~~~~~~lS~q~l~~c~~--~~~g~~g~~~~~~~~   90 (241)
T d2oula1          17 FDHAAYDWRLH----SGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF--KNYGCNGGLINNAFE   90 (241)
T ss_dssp             CCSSCEEGGGT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT--TSCTTBCBCHHHHHH
T ss_pred             CCCCcccCCCC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHHhCCCCccCHHHHHhCcc--ccCCCCCccccccee
Confidence            36889999988    889999999999999999999999999999999999999999999986  357899998888777


Q ss_pred             HHH-HcCccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeEeCCCHHHHHHHHHHcCCEEEE
Q 018568          177 YFV-HHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVS  255 (354)
Q Consensus       177 ~~~-~~Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~l~~~gPV~v~  255 (354)
                      ++. ..|+++|++|||.....             .+   |...    .....+.+..|... +++.||++|+++|||+++
T Consensus        91 ~~~~~~G~~~e~~~Py~~~~~-------------~~---~~~~----~~~~~~~i~~y~~~-~~~~ik~~l~~~gPv~v~  149 (241)
T d2oula1          91 DMIELGGICPDGDYPYVSDAP-------------NL---CNID----RCTEKYGIKNYLSV-PDNKLKEALRFLGPISIS  149 (241)
T ss_dssp             HHHHTTSBCBTTSSCCCTTSC-------------CC---CCTT----SSSCCBCCSEEEEC-CTTCHHHHHHHTCCEEEE
T ss_pred             ecccccCccccccCCcccccc-------------cc---cccc----ccccceeeeecccc-chhhhHhhhhhccceEEE
Confidence            654 47999999999965411             00   0000    01233455666532 336899999999999999


Q ss_pred             EEecccccccCCceeecCCCCccCCeeEEEEEeCCCC---------CCccEEEEEccCCCCCCCCceEEEEccC----Cc
Q 018568          256 FTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSD---------DGEDYWILANQWNRSWGADGYFKIKRGS----NE  322 (354)
Q Consensus       256 ~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~---------~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~  322 (354)
                      |.++++|..|++|||..+++. .++|||+|||||++.         .+.+|||||||||++||++|||||+|+.    |.
T Consensus       150 ~~v~~~f~~~~~gi~~~~~~~-~~~Hav~IVGyg~~~~~~~~~~~~~~~~yWIvkNSWG~~WG~~Gy~~i~~~~~~~~~~  228 (241)
T d2oula1         150 VAVSDDFAFYKEGIFDGECGD-QLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRK  228 (241)
T ss_dssp             ECBCHHHHTCCSSBCCSCBCS-SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCG
T ss_pred             EEechhhhhCcCccccCCccc-ccCcceeEEEeccccccccccccCCCCcEEEEEcCCCCCcccCCEEEEEcCCCCCCCc
Confidence            999999999999999877665 469999999999532         2467999999999999999999999985    58


Q ss_pred             cccccceeEe
Q 018568          323 CGIEEDVVAG  332 (354)
Q Consensus       323 cgI~~~~~~~  332 (354)
                      |||+++++.+
T Consensus       229 Cgi~~~a~~p  238 (241)
T d2oula1         229 CGLGTDAFIP  238 (241)
T ss_dssp             GGTTSSEEEE
T ss_pred             CCccceeeEe
Confidence            9999997763


No 13 
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.6e-55  Score=386.65  Aligned_cols=209  Identities=30%  Similarity=0.642  Sum_probs=174.4

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCC-CCCCCCCCCchHHHHH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGF-LCGDGCDGGYPISAWR  176 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~-~~~~gc~GG~~~~a~~  176 (354)
                      ||++||||+.    ++||||||||.||||||||+++++|++++++++....+|+|++++|... ..+.||+||++..|+.
T Consensus         1 LP~~~Dwr~~----~~vtpV~dQG~cGsCwAfA~~~~~e~~~~i~~~~~~~~S~~~~~~~~~~~~~~~gc~gg~~~~a~~   76 (217)
T d2h7ja1           1 LPDSVDWREK----GCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQ   76 (217)
T ss_dssp             CCSCEEGGGG----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCTTBCCCHHHHHH
T ss_pred             CCCcccCCcC----CCCCCCccCCCchHHHHHHHHHHHHHHHHHHhCCCCcccHHHhhhhhcccccCCCCCCCcccceee
Confidence            8999999987    7799999999999999999999999999999999999999999999863 2457999999999988


Q ss_pred             HHHH-cCccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE--eCCCHHHHHHHHHHcCCEE
Q 018568          177 YFVH-HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR--INSDPEDIMAEIYKNGPVE  253 (354)
Q Consensus       177 ~~~~-~Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~--~~~~~~~ik~~l~~~gPV~  253 (354)
                      ++.. .|++++++|||.....                 .|....    ......+..|.  ....++.||++|++.|||+
T Consensus        77 ~~~~~~g~~~~~~~p~~~~~~-----------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~v~  135 (217)
T d2h7ja1          77 YIIDNKGIDSDASYPYKAMDQ-----------------KCQYDS----KYRAATCSKYTELPYGREDVLKEAVANKGPVS  135 (217)
T ss_dssp             HHHHHTCEEBTTTSCCCSSCC-----------------CCCCCG----GGEEECCCEEEECCTTCHHHHHHHHHHTCCEE
T ss_pred             ehhhcccccccccCCCccccc-----------------cccccc----ccccceeeeeeccCccHHHHHHHHhhcCceEE
Confidence            7654 6899999999954311                 011100    02233444454  2456789999999999999


Q ss_pred             EEEEe-cccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccC-CccccccceeE
Q 018568          254 VSFTV-YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVA  331 (354)
Q Consensus       254 v~~~~-~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~-n~cgI~~~~~~  331 (354)
                      +++.. .++|..|++|||..+++...++|||+||||| ++.+++|||||||||++||++|||||+||. |.||||++++.
T Consensus       136 ~~~~~~~~~f~~~~~gi~~~~~~~~~~~Hav~iVGy~-~~~~~~ywivrNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~  214 (217)
T d2h7ja1         136 VGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY  214 (217)
T ss_dssp             EEECCCSHHHHTCCSSCBCCTTCCSCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEE
T ss_pred             EEEeeehhhhcccCCcceeCCCCCCCCCeEEEEEecc-cCCCceEEEEEcCCCCCcccCCEEEEecCCCCcCCccccccc
Confidence            99864 4789999999999888777789999999999 667899999999999999999999999996 99999998765


Q ss_pred             e
Q 018568          332 G  332 (354)
Q Consensus       332 ~  332 (354)
                      .
T Consensus       215 p  215 (217)
T d2h7ja1         215 P  215 (217)
T ss_dssp             E
T ss_pred             e
Confidence            4


No 14 
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.3e-54  Score=383.01  Aligned_cols=206  Identities=32%  Similarity=0.659  Sum_probs=171.0

Q ss_pred             CCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHHH
Q 018568           99 PKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYF  178 (354)
Q Consensus        99 P~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~~  178 (354)
                      |++||||++    ++||||||||.||||||||+++++|++++++++...+||+|+|++|..  ...+|.||....|++++
T Consensus         2 P~~~DwR~~----~~vtpV~dQG~cGsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~~c~~--~~~~c~G~~~~~a~~~~   75 (215)
T d2r6na1           2 PDSVDYRKK----GYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYV   75 (215)
T ss_dssp             CSCEETTTT----TCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCGGGCCCHHHHHHHH
T ss_pred             CCCEeCccC----CCCCCCccCccChhHHHHHHHHHHHHHHHHHhCCCccchhhhhhhccc--ccCccCCcchhhHHHHH
Confidence            899999997    789999999999999999999999999999999999999999999986  24789999999999999


Q ss_pred             HHcC-ccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE--eCCCHHHHHHHHHHcCCEEEE
Q 018568          179 VHHG-VVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR--INSDPEDIMAEIYKNGPVEVS  255 (354)
Q Consensus       179 ~~~G-i~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~--~~~~~~~ik~~l~~~gPV~v~  255 (354)
                      +..| +.++..|||.....                 .|.....    .....+..+.  ...+.++||++|+++|||++.
T Consensus        76 ~~~g~~~~~~~y~~~~~~~-----------------~~~~~~~----~~~~~~~~~~~~~~~~~~~ik~~~~~~g~v~~~  134 (215)
T d2r6na1          76 QKNRGIDSEDAYPYVGQEE-----------------SCMYNPT----GKAAKCRGYREIPEGNEKALKRAVARVGPVSVA  134 (215)
T ss_dssp             HHHTCEEBTTTSCCCSSCC-----------------CCCCCGG----GEEECCCEEEECCTTCHHHHHHHHHHTCCEEEE
T ss_pred             HhcCccccccCCCcccccc-----------------ccccccc----ccceeecceeeccccHHHHHHHhhcccccEEEE
Confidence            9987 67888888844310                 1111010    1223344444  345789999999999999998


Q ss_pred             EEe-cccccccCCceeecCCC-CccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccC-CccccccceeEe
Q 018568          256 FTV-YEDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAG  332 (354)
Q Consensus       256 ~~~-~~~f~~y~~Giy~~~~~-~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~-n~cgI~~~~~~~  332 (354)
                      +.+ .++|..|++||+....+ ...++|||+||||| ++.+++|||||||||++|||+|||||+|+. |.|||++.+...
T Consensus       135 ~~~~~~~f~~y~~gi~~~~~~~~~~~~Hav~iVGy~-~~~~~~ywivrNSWG~~WGe~Gy~~i~~~~~n~Cgi~~~~~~p  213 (215)
T d2r6na1         135 IDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG-IQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP  213 (215)
T ss_dssp             ECCCSHHHHTCCSSEECCTTCCTTCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEE
T ss_pred             EEeeechhcccCCCcccCCCCCCCCCCeeEEEEEee-ccCCCcEEEEEcCCCCCcccCCeEEEEeCCCCcCcccCccccc
Confidence            864 46799999999987543 45689999999999 667789999999999999999999999996 799999976654


No 15 
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3e-54  Score=384.35  Aligned_cols=210  Identities=30%  Similarity=0.630  Sum_probs=173.9

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY  177 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~  177 (354)
                      ||++||||++    ++||||||||.||||||||+++++|++++++++....||+|++++|.....+.+|+||++..|+.+
T Consensus         1 LP~~~DwR~~----~~vtpV~dQG~cGsCwAfA~~~~~e~~~~~~~~~~~~lS~~~~~~~~~~~~~~~~~gg~~~~a~~~   76 (221)
T d1fh0a_           1 LPKSVDWRKK----GYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQY   76 (221)
T ss_dssp             CCSCEEGGGG----TCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCCCHHHHHHH
T ss_pred             CCCCeeCCcC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccccceeEEeccccCCcccCCCchhhhhhh
Confidence            8999999998    789999999999999999999999999999999999999999999986445678999999999999


Q ss_pred             HHHcC-ccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE--eCCCHHHHHHHHHHcCCEEE
Q 018568          178 FVHHG-VVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR--INSDPEDIMAEIYKNGPVEV  254 (354)
Q Consensus       178 ~~~~G-i~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~--~~~~~~~ik~~l~~~gPV~v  254 (354)
                      +.+.| ++.+++|||.....                 .|.....    .....+..+.  ....++++|++|+++|||++
T Consensus        77 ~~~~g~~~~~~~~p~~~~~~-----------------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~  135 (221)
T d1fh0a_          77 VKENGGLDSEESYPYVAVDE-----------------ICKYRPE----NSVAQDTGFTVVAPGKEKALMKAVATVGPISV  135 (221)
T ss_dssp             HHHHTCEEBTTTSCCCSSCC-----------------CCCCCGG----GEEECCSCEEECCTTCHHHHHHHHHHTCCEEE
T ss_pred             hhhcCccccccCcCcccccc-----------------ccccccc----cccccceeeeecCCcHHHHHHHHHHhcCCceE
Confidence            99887 67899999954311                 0110000    1223333444  34567889999999999999


Q ss_pred             EEEec-ccccccCCceeecCCC-CccCCeeEEEEEeCCC---CCCccEEEEEccCCCCCCCCceEEEEccC-Cccccccc
Q 018568          255 SFTVY-EDFAHYKSGVYKHITG-DVMGGHAVKLIGWGTS---DDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEED  328 (354)
Q Consensus       255 ~~~~~-~~f~~y~~Giy~~~~~-~~~~~Hav~iVGyg~~---~~g~~ywivkNSWG~~WG~~Gy~~i~~g~-n~cgI~~~  328 (354)
                      ++.+. +.|+.|++|++..+.. ...++|+++|||||.+   +++.+|||||||||++|||+|||||+|+. |+|||+++
T Consensus       136 ~~~~~~~~~~~y~~g~~~~~~~~~~~~~ha~~ivG~g~~~~~~~~~~ywivrNSWG~~WGd~Gy~~i~~~~~n~CgI~~~  215 (221)
T d1fh0a_         136 AMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATA  215 (221)
T ss_dssp             EECCCSHHHHTCCSSEECCTTCCSSCCCEEEEEEEEEESSSCTTSSEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTS
T ss_pred             EEEeccccccccCCCccccccccccCCcccEEEeeEeccCcCCCCceEEEEEeCCCCCcccCCEEEEEeCCCCccccCCC
Confidence            99986 5799999999976543 4457999999999843   46788999999999999999999999985 89999999


Q ss_pred             eeEe
Q 018568          329 VVAG  332 (354)
Q Consensus       329 ~~~~  332 (354)
                      ++.+
T Consensus       216 ~~yp  219 (221)
T d1fh0a_         216 ASYP  219 (221)
T ss_dssp             CEEE
T ss_pred             cccc
Confidence            7654


No 16 
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]}
Probab=100.00  E-value=4e-54  Score=383.05  Aligned_cols=210  Identities=31%  Similarity=0.630  Sum_probs=169.8

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY  177 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~  177 (354)
                      ||++||||++    ++|+||||||.||||||||+++++|++++++++..+.||+|++++|.....+.+|.||....++.+
T Consensus         1 LP~~~Dwr~~----~~itpV~dQg~cGsCwAfA~~~~~e~~~~~~~~~~~~lS~q~~~~c~~~~~~~~~~G~~~~~~~~~   76 (218)
T d1aeca_           1 LPSYVDWRSA----GAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQF   76 (218)
T ss_dssp             CCSCEEGGGG----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCBTTBCTTBCCCHHHHHHH
T ss_pred             CCCceeCCCC----CCCCCCccCCCChhHHHHHHHHHHHHHHHHhcCCCcchhhhhhhhhccccCCcccCCCccccccee
Confidence            8999999987    789999999999999999999999999999999999999999999987555678999999999999


Q ss_pred             HHHcC-ccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeE-eeeeEeCCCHHHHHHHHHHcCCEEEE
Q 018568          178 FVHHG-VVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYS-ISAYRINSDPEDIMAEIYKNGPVEVS  255 (354)
Q Consensus       178 ~~~~G-i~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~-i~~~~~~~~~~~ik~~l~~~gPV~v~  255 (354)
                      +.+.| ++.|.+|||....             ..|...+...       .... ........+.+.||++|+.+|||+++
T Consensus        77 ~~~~g~v~~e~~yp~~~~~-------------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~gpv~v~  136 (218)
T d1aeca_          77 IINNGGINTEENYPYTAQD-------------GECNVDLQNE-------KYVTIDTYENVPYNNEWALQTAVTYQPVSVA  136 (218)
T ss_dssp             HHHHTCBCBTTTSCCCSSC-------------CCCCHHHHHC-------CCBCCCEEEECCSSCHHHHHHHHHHSCEEEE
T ss_pred             ehhCceecCccccCccccc-------------Cccceecccc-------ccceecccccccccHHHHHHHHhhcCCceeE
Confidence            99887 8899999995431             1111111110       1111 11112344668999999999999999


Q ss_pred             EEecccc-cccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEcc---CCccccccceeE
Q 018568          256 FTVYEDF-AHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG---SNECGIEEDVVA  331 (354)
Q Consensus       256 ~~~~~~f-~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g---~n~cgI~~~~~~  331 (354)
                      +.+..+| .++.+|++..+.+. .++|||+||||| ++++++|||||||||++||++|||||+|+   .|+|||+++++.
T Consensus       137 ~~~~~~~~~~~~~g~~~~~~~~-~~~Hav~iVGyg-~~~~~~ywivrNSWG~~WGd~Gy~~i~~~~~~~~~Cgi~~~~~~  214 (218)
T d1aeca_         137 LDAAGDAFKQYSSGIFTGPCGT-AIDHAVTIVGYG-TEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSY  214 (218)
T ss_dssp             ECCCSHHHHHCCSSEECCSCCS-SCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECCCSTTCGGGTTSSCEE
T ss_pred             EEecchhhhcCCCCcccccccc-cCCceeEEEEEe-ccCCeEEEEEEcCCCCCcccCCEEEEEeCCCCCcccccCCccee
Confidence            9988665 45666777665544 469999999999 67789999999999999999999999994   689999999877


Q ss_pred             ee
Q 018568          332 GL  333 (354)
Q Consensus       332 ~~  333 (354)
                      ++
T Consensus       215 ~~  216 (218)
T d1aeca_         215 PV  216 (218)
T ss_dssp             EE
T ss_pred             cc
Confidence            53


No 17 
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]}
Probab=100.00  E-value=2.3e-53  Score=379.50  Aligned_cols=215  Identities=33%  Similarity=0.645  Sum_probs=172.7

Q ss_pred             CCCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHH
Q 018568           97 KLPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWR  176 (354)
Q Consensus        97 ~lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~  176 (354)
                      .||++||||++    ++|+||||||.||||||||+++++|++++++++....||+|+|++|.. ....+|.||....|+.
T Consensus         1 ~lP~~~Dwr~~----~~itpV~dQG~cGsCwAfA~~~~~e~~~~~~~~~~~~~S~q~l~~c~~-~~~~~~~G~~~~~a~~   75 (224)
T d1s4va_           1 TVPASVDWRKK----GAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDT-DQNQGCNGGLMDYAFE   75 (224)
T ss_dssp             CCCSCEETTTT----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-SSCCTTBCBCHHHHHH
T ss_pred             CCCCceeCCCC----CCCCCCccCCcCchHHHHHHHHHHHHHHHHhcCCCCccchhhhhhccc-cccccCCCCchhhHhh
Confidence            48999999987    889999999999999999999999999999999999999999999986 3346889999999999


Q ss_pred             HHHHcC-ccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE--eCCCHHHHHHHHHHcCCEE
Q 018568          177 YFVHHG-VVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR--INSDPEDIMAEIYKNGPVE  253 (354)
Q Consensus       177 ~~~~~G-i~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~--~~~~~~~ik~~l~~~gPV~  253 (354)
                      ++.++| ++.|.++||.....             .+   |....    ....+.+..+.  ...+.+.||++|.+ +||+
T Consensus        76 ~~~~~g~~~~e~~~~~~~~~~-------------~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~k~~l~~-~pv~  134 (224)
T d1s4va_          76 FIKQRGGITTEANYPYEAYDG-------------TC---DVSKE----NAPAVSIDGHENVPENDENALLKAVAN-QPVS  134 (224)
T ss_dssp             HHHHHTCBCBTTTSCCCSSCC-------------CC---CHHHH----TCCCBCCCEEEECCTTCHHHHHHHHHH-SCEE
T ss_pred             hHhhcCceeecccccccCcCC-------------cc---ccccc----cccceeecccccccCccHHHHHHHHhc-CCce
Confidence            998875 66767777743211             00   10000    01223333343  34577888888865 7888


Q ss_pred             EEEEec-ccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccC----Cccccccc
Q 018568          254 VSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEED  328 (354)
Q Consensus       254 v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~  328 (354)
                      +++.+. ++|..|.+|+|..+... .++|||+|||||++.++++|||||||||++||++|||||+||.    |.|||+++
T Consensus       135 ~~~~~~~~~~~~y~~g~~~~~~~~-~~~Hav~iVGy~~~~~g~~ywiikNSWG~~WG~~Gy~~i~~g~~~~~n~CgI~~~  213 (224)
T d1s4va_         135 VAIDAGGSDFQFYSEGVFTGSCGT-ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAME  213 (224)
T ss_dssp             EEECCCSHHHHTCCSSEECCCCCC-CCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSS
T ss_pred             EEEEecchhhhhccCCCccCcccc-cCCcceEEEecccccCCceEEEEEcCCCCccccCceEEEECCCCCCCCcCCccce
Confidence            777764 78999999999765543 4699999999997778899999999999999999999999974    78999999


Q ss_pred             eeEeeccCCC
Q 018568          329 VVAGLPSSKN  338 (354)
Q Consensus       329 ~~~~~p~~~~  338 (354)
                      ++.++|+.++
T Consensus       214 ~~yp~~~~~~  223 (224)
T d1s4va_         214 ASYPIKKSSN  223 (224)
T ss_dssp             CEEEECCSSC
T ss_pred             eeeeeccCCC
Confidence            9999888764


No 18 
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Probab=100.00  E-value=5.8e-53  Score=373.46  Aligned_cols=204  Identities=29%  Similarity=0.580  Sum_probs=166.1

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY  177 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~  177 (354)
                      ||++||||++    ++|+||||||.||||||||+++++|++++++++....||+|++++|..  ...+|.|+.+..|+.+
T Consensus         1 LP~~~D~R~~----~~v~pV~dQg~cGsCwAfa~~~~~e~~~~i~~~~~~~~S~q~~~~c~~--~~~g~~g~~~~~a~~~   74 (212)
T d1khqa_           1 IPEYVDWRQK----GAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDR--RSYGCNGGYPWSALQL   74 (212)
T ss_dssp             CCSCEETTTT----TCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCBCHHHHHHH
T ss_pred             CCCCeeCCCC----CCCCCcccCCcCchHHHHHHHHHHHHHHHHHcCCCcccCHHHhhcccc--ccCccccccccccccc
Confidence            8999999987    779999999999999999999999999999999999999999999986  3578999999999999


Q ss_pred             HHHcCccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE-eCCCHHHHHHHHHHcCCEEEEE
Q 018568          178 FVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSF  256 (354)
Q Consensus       178 ~~~~Gi~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~~  256 (354)
                      +.+.|+++|+.+||.+...   .             .|....    ......+..+. .......+++++..+|||++++
T Consensus        75 ~~~~g~~~~~~~p~~~~~~---~-------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~  134 (212)
T d1khqa_          75 VAQYGIHYRNTYPYEGVQR---Y-------------CRSREK----GPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVL  134 (212)
T ss_dssp             HHHTCBCBTTTSCCCSSCC---C-------------CCTTTT----CSCSBCCCEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred             cccccccccccCCcccccC---c-------------cccccc----ccceeeeeeeeeeccccHHHHHHHHhcCCcEEEE
Confidence            9999999999999954311   0             000000    01122333444 3333355666677889999888


Q ss_pred             Eec-ccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccC----CccccccceeE
Q 018568          257 TVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVA  331 (354)
Q Consensus       257 ~~~-~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~~  331 (354)
                      .+. +.|..|++|+|..+.+. .++|||+|||||     .+|||||||||++|||+|||||+||.    |+|||+++++.
T Consensus       135 ~~~~~~f~~~~~g~~~~~~~~-~~~Hav~iVGyg-----~~ywivrNSWG~~WGd~Gy~~i~~~~~~~~~~Cgi~~~~~~  208 (212)
T d1khqa_         135 EAAGKDFQLYRGGIFVGPCGN-KVDHAVAAVGYG-----PNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFY  208 (212)
T ss_dssp             CCCSHHHHTCCSSEECCSCCS-CCCEEEEEEEEE-----TTEEEEECSBCTTSTBTTEEEEECCSCCTTCGGGTTSCCEE
T ss_pred             EeecchhcccccCcccccccc-ccCeEEEecccC-----CcEEEEEcCCCCCcccCCEEEEEcCCCCCCCcCCcccEeee
Confidence            765 68999999999877665 469999999998     35999999999999999999999987    57999999877


Q ss_pred             ee
Q 018568          332 GL  333 (354)
Q Consensus       332 ~~  333 (354)
                      .+
T Consensus       209 p~  210 (212)
T d1khqa_         209 PV  210 (212)
T ss_dssp             EE
T ss_pred             ec
Confidence            43


No 19 
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]}
Probab=100.00  E-value=2.7e-52  Score=370.52  Aligned_cols=207  Identities=31%  Similarity=0.663  Sum_probs=167.8

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY  177 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~  177 (354)
                      ||++||||++    ++|+||||||.||||||||++++||++++++++..+.||+|+|++|..  ...+|.||....|+++
T Consensus         1 LP~s~Dwr~~----~~v~pV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~--~~~~~~G~~~~~a~~~   74 (215)
T d1iwda_           1 LPSFVDWRSK----GAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT--ASHGCNGGWMNNAFQY   74 (215)
T ss_dssp             CCSCEEGGGG----TCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred             CCCceeCCcC----CCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccChhhheeccc--CCCCCCCcchhhHHHH
Confidence            8999999987    789999999999999999999999999999999999999999999986  3578999999999999


Q ss_pred             HHHcCcc-CCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE-eCCCHHHHHHHHHHcCCEEEE
Q 018568          178 FVHHGVV-TEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVS  255 (354)
Q Consensus       178 ~~~~Gi~-~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~  255 (354)
                      +.++|.+ .+.++||....                 ..|....     .+...+..|. ...+.++++++|...+||+++
T Consensus        75 ~~~~g~~~~~~~~~~~~~~-----------------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~  132 (215)
T d1iwda_          75 IITNGGIDTQQNYPYSAVQ-----------------GSCKPYR-----LRVVSINGFQRVTRNNESALQSAVASQPVSVT  132 (215)
T ss_dssp             HHHHTCBCBTTTSCCCSSC-----------------CCCCTTC-----CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred             HHhcCeeccccCCCccccc-----------------ccccccc-----cceeEeccccccCccHHHHHHHHHhcCCccce
Confidence            9998855 45556664321                 0111111     2234455565 444556677778888999999


Q ss_pred             EEecc-cccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccC----Ccccccccee
Q 018568          256 FTVYE-DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVV  330 (354)
Q Consensus       256 ~~~~~-~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~----n~cgI~~~~~  330 (354)
                      +.+.. .|..|++|+|..+++.. ++|||+||||| ++++++|||||||||++|||+|||||+|+.    |.|||++.+.
T Consensus       133 ~~~~~~~~~~~~~g~~~~~~~~~-~~Hav~iVGyg-~~~~~~ywiirNSWG~~WGd~Gy~~I~~~~~~~~~~CGi~~~~~  210 (215)
T d1iwda_         133 VEAAGAPFQHYSSGIFTGPCGTA-QNHGVVIVGYG-TQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPS  210 (215)
T ss_dssp             ECCCSHHHHTCCSSEECCCCCCC-CCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCE
T ss_pred             eeecchhhhccccCccccccccc-ccceEEEEEee-cCCCceEEEEECCCCcccccCCEEEEECCCCCCCCcCCccccce
Confidence            98864 55667889998776544 69999999999 677899999999999999999999999985    5799999987


Q ss_pred             Eeec
Q 018568          331 AGLP  334 (354)
Q Consensus       331 ~~~p  334 (354)
                      .+++
T Consensus       211 ~p~~  214 (215)
T d1iwda_         211 YPTK  214 (215)
T ss_dssp             EEEC
T ss_pred             eecc
Confidence            6643


No 20 
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]}
Probab=100.00  E-value=6.1e-52  Score=366.24  Aligned_cols=200  Identities=31%  Similarity=0.627  Sum_probs=162.8

Q ss_pred             CCCccccCcCCCCCCCcCccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHH
Q 018568           98 LPKSFDARSAWPQCSTISRILDQGHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRY  177 (354)
Q Consensus        98 lP~s~D~R~~w~~~~~v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~  177 (354)
                      ||++||||++    ++||||||||.||||||||+++++|++++++++..++||+|+|++|..  .+.+|.||.+..++.+
T Consensus         1 LP~~~D~R~~----~~vtpV~dQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~--~~~~~~g~~~~~~~~~   74 (208)
T d1o0ea_           1 LPEQIDWRKK----GAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQY   74 (208)
T ss_dssp             CCSCEEGGGG----TCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHH
T ss_pred             CCCcccCccC----CCCCCcccCCCCccHHHHHHHHHHHHHHHHHhCCCCCcCHHHhhhhcc--CCCCCCCccchhhhhh
Confidence            8999999998    779999999999999999999999999999999999999999999986  4578999999999999


Q ss_pred             HHHcC-ccCCCcccCCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeE-eCCCHHHHHHHHHHcCCEEEE
Q 018568          178 FVHHG-VVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVS  255 (354)
Q Consensus       178 ~~~~G-i~~e~~yPY~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~-~~~~~~~ik~~l~~~gPV~v~  255 (354)
                      +...| ...+.++||...                 ...|....      ..+.+..|. +....+.+++.+...|||+++
T Consensus        75 ~~~~g~~~~~~~~p~~~~-----------------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~  131 (208)
T d1o0ea_          75 IINNGGIDTQANYPYKAV-----------------QGPCQAAS------KVVSIDGYNGVPFCNEXALKQAVAVQPSTVA  131 (208)
T ss_dssp             HHHHTCBCBTTTSCCCSS-----------------CCCCCCCC------CCBCCCEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred             hhhcCccccccCCCCccc-----------------CCCccCcc------cccccccccccccchhhHHHHHhhcCCceEE
Confidence            88876 567788888543                 11232221      223445555 333335555666677888888


Q ss_pred             EE-ecccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEc--cCCccccccceeEe
Q 018568          256 FT-VYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR--GSNECGIEEDVVAG  332 (354)
Q Consensus       256 ~~-~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~--g~n~cgI~~~~~~~  332 (354)
                      +. +.+.|..|++|||..+.+.. ++|||+|||||     ++|||||||||++|||+|||||+|  +.|.|||++.++..
T Consensus       132 ~~~~~~~f~~~~~gi~~~~~~~~-~~Hav~iVGy~-----~~ywiirNSWG~~WGd~Gy~~I~~~~~~~~Cgi~~~~~~p  205 (208)
T d1o0ea_         132 IDASSAQFQQYSSGIFSGPCGTK-LNHGVTIVGYQ-----ANYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYP  205 (208)
T ss_dssp             ECCCSHHHHTCCSSEECCCCCSC-CCEEEEEEEEC-----SSEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEE
T ss_pred             EEecchhhcccccCccccccccc-CCcEEEEEeee-----cceEEEECCCCCCcccCCeEEEEccCCCCccCccccceec
Confidence            76 45789999999998776554 69999999998     359999999999999999999999  45799999987654


No 21 
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Probab=99.74  E-value=8e-18  Score=160.99  Aligned_cols=205  Identities=18%  Similarity=0.268  Sum_probs=130.5

Q ss_pred             cCccCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCccccHHHHHHhcC----------------C----------CCCCCC
Q 018568          114 ISRILDQGHCGSCWAFGAVEALSDRFCIHFG-MNLSLSVNDLLACCG----------------F----------LCGDGC  166 (354)
Q Consensus       114 v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~-~~~~lS~q~l~~c~~----------------~----------~~~~gc  166 (354)
                      .+||+||++.|.||.||++..|+..+..+.+ ..++||+.+++.-..                .          .....+
T Consensus        66 ~~~vtnQ~~SGrCW~FA~ln~lr~~~~~~~~~~~felSq~Yl~f~dklEKan~fL~~ii~~~~~~~~~R~v~~ll~~~~~  145 (458)
T d3gcba_          66 STPVTNQKSSGRAWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDIDSRLVQYLLAAPTE  145 (458)
T ss_dssp             CCSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTSHHHHHHHHCTTC
T ss_pred             CCCcccCCCCcccHHHhChHHHHHHHHHHcCCCCeeecHHHHHHhhHHHHHHHHHHHHHHhcCCCcchHHHHHHhhcccC
Confidence            5899999999999999999999999877655 779999988654321                0          012357


Q ss_pred             CCCchHHHHHHHHHcCccCCCcccCCCC----C-------------------------CCCC------------------
Q 018568          167 DGGYPISAWRYFVHHGVVTEECDPYFDS----T-------------------------GCSH------------------  199 (354)
Q Consensus       167 ~GG~~~~a~~~~~~~Gi~~e~~yPY~~~----~-------------------------~~~~------------------  199 (354)
                      +||.-..+...+.++|+++.+.||=+..    +                         ....                  
T Consensus       146 DGG~w~m~~nli~KYG~VPk~~ypet~~~s~~s~~mN~~L~~kLre~a~~Lr~~~~~~~~~~~~~~~~~~~~~~~vy~il  225 (458)
T d3gcba_         146 DGGQYSMFLNLVKKYGLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIVTLREQMQREIFRLM  225 (458)
T ss_dssp             SCBCHHHHHHHHHHHCCCBGGGSCSCSHHHHBCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHcCCCcHhhcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999987420    0                         0000                  


Q ss_pred             ------CCCCCC------CC-----------Cccc--cc---------cccccccccccCceeEee-----------eeE
Q 018568          200 ------PGCEPA------YP-----------TPKC--VR---------KCVKKNQLWRNSKHYSIS-----------AYR  234 (354)
Q Consensus       200 ------~~~~~~------~~-----------~~~~--~~---------~c~~~~~~~~~~~~~~i~-----------~~~  234 (354)
                            |+..+.      +.           +|.-  ..         .|....+.....+.|.+.           .|.
T Consensus       226 ~~~LG~PP~~~~e~F~~~y~dkd~k~~~~~~TP~~F~~~~v~~~~~dyV~L~n~P~~py~k~y~v~~~~Nv~~G~~~~y~  305 (458)
T d3gcba_         226 SLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKIDRLGNVLGGDAVIYL  305 (458)
T ss_dssp             HHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTSCCCTTSEEEEECCTTSCTTCEEEESSCCSSTTCCCEEEE
T ss_pred             HHHcCCCCCCCCcceeEEecccccceeecCCCCHHHHHHHhCccccceeeecccccCccceEEEecccccccCCcceEEe
Confidence                  211000      00           0000  00         000000000001111111           111


Q ss_pred             -eCCC--HHHHHHHHHHcCCEEEEEEecccccccCCceeecCC--------------------CCccCCeeEEEEEeCCC
Q 018568          235 -INSD--PEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHIT--------------------GDVMGGHAVKLIGWGTS  291 (354)
Q Consensus       235 -~~~~--~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Giy~~~~--------------------~~~~~~Hav~iVGyg~~  291 (354)
                       ++-+  .+.++++|.++.||-.+.+|.. ++..+.||.....                    +....+|||+|||++.+
T Consensus       306 Nvp~d~lk~~~~~sL~~g~pVwfgcDV~k-~f~~k~Gi~d~~~~~~~~~~~~~~~~K~~Rl~~~es~~tHAM~ltGv~~D  384 (458)
T d3gcba_         306 NVDNETLSKLVVKRLQNNKAVFFGSHTPK-FMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHESLMTHAMLITGCHVD  384 (458)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSCCCCEEEEEEEEEEC
T ss_pred             ecCHHHHHHHHHHHHhcCCcEEEEecccc-cccccccccccccccccccCCCcccCHHHHHHhCCCCCCeeEEEEEEEEc
Confidence             2111  1345556777889999999975 6677788865310                    12346999999999866


Q ss_pred             CCCc--cEEEEEccCCCCCCCCceEEEEcc
Q 018568          292 DDGE--DYWILANQWNRSWGADGYFKIKRG  319 (354)
Q Consensus       292 ~~g~--~ywivkNSWG~~WG~~Gy~~i~~g  319 (354)
                      +++.  .+|+|+||||+++|++||+.|+..
T Consensus       385 ~~g~~~~~w~VeNSWG~~~g~~Gy~~msd~  414 (458)
T d3gcba_         385 ETSKLPLRYRVENSWGKDSGKDGLYVMTQK  414 (458)
T ss_dssp             TTTCSEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred             CCCCccceEEEEeccCCCCCCCceEEecHH
Confidence            5554  599999999999999999999853


No 22 
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64  E-value=1.5e-15  Score=144.50  Aligned_cols=79  Identities=19%  Similarity=0.234  Sum_probs=64.4

Q ss_pred             cCccCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCccccHHHHHH----------------hcC---CC---------CCC
Q 018568          114 ISRILDQGHCGSCWAFGAVEALSDRFCIHFG-MNLSLSVNDLLA----------------CCG---FL---------CGD  164 (354)
Q Consensus       114 v~pV~dQg~cGsCwAfA~~~~le~~~~i~~~-~~~~lS~q~l~~----------------c~~---~~---------~~~  164 (354)
                      .+||.||++.|.||.||+...++..+..+.+ ..++||+.+++.                ...   ..         ...
T Consensus        60 ~~~vtnQk~SGrCW~Fa~LN~lR~~~~k~~~~~~felSq~Yl~f~dklEKaN~fL~~ii~~~~~~~~~d~R~v~~ll~~p  139 (453)
T d2cb5a_          60 GKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPEDGRLVQFLLMNP  139 (453)
T ss_dssp             CSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSHHHHHHHHCT
T ss_pred             CCccccCCCCcccHHHhChHHHHHHHHHHcCCCCeehhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHhhCC
Confidence            4789999999999999999999999987766 789999988752                110   00         013


Q ss_pred             CCCCCchHHHHHHHHHcCccCCCcccCC
Q 018568          165 GCDGGYPISAWRYFVHHGVVTEECDPYF  192 (354)
Q Consensus       165 gc~GG~~~~a~~~~~~~Gi~~e~~yPY~  192 (354)
                      ..+||.-..+...++++|+++.++||=+
T Consensus       140 ~~DGGqw~m~~nli~KYGvVPk~~~pet  167 (453)
T d2cb5a_         140 ANDGGQWDMLVNIVEKYGVIPKKCFPES  167 (453)
T ss_dssp             TCSCBCHHHHHHHHHHHCCCBGGGSCCC
T ss_pred             CCCCcchHHHHHHHHHcCcccHhhCCCC
Confidence            5789999999999999999999999863


No 23 
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]}
Probab=96.22  E-value=0.051  Score=42.47  Aligned_cols=69  Identities=16%  Similarity=0.141  Sum_probs=46.7

Q ss_pred             CHHHHHHHHHHcCCEEEEE-EecccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEE
Q 018568          238 DPEDIMAEIYKNGPVEVSF-TVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI  316 (354)
Q Consensus       238 ~~~~ik~~l~~~gPV~v~~-~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i  316 (354)
                      ..+.+++.+.++.|+.+.- .+.+           .++ ....+||++|||+. .-++.+--|+-|=|-.     ||.-.
T Consensus        98 sy~~Vd~lt~~Nkgi~il~~~v~~-----------~~n-~~hagHAmaV~GnA-~~nn~~~ii~WNPWD~-----g~~~q  159 (183)
T d1pxva_          98 SYNQVDQLTKDNVGIMILAQSVSQ-----------NPN-DPHLGHALAVVGNA-KINDQEKLIYWNPWDT-----ELSIQ  159 (183)
T ss_dssp             CHHHHHHHHHTTCCEEEEEECCCS-----------STT-SCCCEEEEEEEEEE-EETTEEEEEEECTTCS-----SCEEE
T ss_pred             cHHHHHHHhhcCCcEEEEeeeecc-----------CCC-CcccceeEEEeeee-eEcCceEEEEeCCCcC-----Ccccc
Confidence            3477888888888877643 2321           111 22369999999999 5567777777788854     88888


Q ss_pred             EccCCccc
Q 018568          317 KRGSNECG  324 (354)
Q Consensus       317 ~~g~n~cg  324 (354)
                      ...++..-
T Consensus       160 da~Sn~I~  167 (183)
T d1pxva_         160 DADSSLLH  167 (183)
T ss_dssp             ETTCCEEE
T ss_pred             CCccCeEe
Confidence            87766443


No 24 
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]}
Probab=96.22  E-value=0.16  Score=39.14  Aligned_cols=133  Identities=16%  Similarity=0.242  Sum_probs=83.5

Q ss_pred             CCCCCCcHHHHHHHHHHHHHHHH--------HcCCCccccHHHHHHhcCCCCCCCCCCCchHHHHHHHHHcCccCCCccc
Q 018568          119 DQGHCGSCWAFGAVEALSDRFCI--------HFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDP  190 (354)
Q Consensus       119 dQg~cGsCwAfA~~~~le~~~~i--------~~~~~~~lS~q~l~~c~~~~~~~gc~GG~~~~a~~~~~~~Gi~~e~~yP  190 (354)
                      .||.-|-|-+|+.++.|-.....        .+-....||.|++-++..          .+..-++|.+..|--..    
T Consensus        16 tQg~nsWCAgytmaalLnat~nt~~y~A~~iMr~lyPn~s~~~l~~~~~----------tp~qmi~Yg~sqGr~~~----   81 (173)
T d1cv8a_          16 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTGL----------TPREMIYFGQTQGRSPQ----   81 (173)
T ss_dssp             CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCCC----------CHHHHHHHHHHTTCCCE----
T ss_pred             hcCcccHHHHHHHHHHHHHhhcCCCccHHHHHHHhCCCcchhhhhhcCC----------CHHHHHHHHHccCCChh----
Confidence            49999999999999988776421        111346778888877653          46677788877663100    


Q ss_pred             CCCCCCCCCCCCCCCCCCccccccccccccccccCceeEeeeeEeCCCHHHHHHHHHHcCCEEEEEEecccccccCCcee
Q 018568          191 YFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVY  270 (354)
Q Consensus       191 Y~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~f~~y~~Giy  270 (354)
                      |..                                         --...++..+.+..+.-+.+-...          | 
T Consensus        82 ~~n-----------------------------------------~m~sy~~vd~lt~~Nkgi~il~~~----------v-  109 (173)
T d1cv8a_          82 LLN-----------------------------------------RMTTYNEVDNLTKNNKGIAILGSR----------V-  109 (173)
T ss_dssp             EES-----------------------------------------SCCCHHHHHHHHHTTCCEEEEEEE----------S-
T ss_pred             hhc-----------------------------------------CCCchhhHHHHhhccCCcEeeeec----------c-
Confidence            100                                         001235566655554333332221          1 


Q ss_pred             ecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCCCCceEEEEccCCcc
Q 018568          271 KHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNEC  323 (354)
Q Consensus       271 ~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~g~n~c  323 (354)
                      ..+++ ...+||+.|||+..-.++.+--+|-|=|-.     ||.-....++..
T Consensus       110 es~~g-~h~~hAmaV~GnA~~nn~q~vi~~WNPWd~-----~~~~qda~Sn~I  156 (173)
T d1cv8a_         110 ESRNG-MHAGHAMAVVGNAKLNNGQEVIIIWNPWDN-----GFMTQDAKNNVI  156 (173)
T ss_dssp             SCBTT-BCCEEEEEEEEEEEETTSCEEEEEECTTCS-----SCEEEETTCCEE
T ss_pred             cCCCC-CccceeEEEeecceecCCceEEEEeCCCcC-----CccccCCccCee
Confidence            12222 246999999999965677888899999965     888888776643


No 25 
>d1dkia_ d.3.1.1 (A:) Streptococcal pyrogenic exotoxin B {Streptococcus pyogenes [TaxId: 1314]}
Probab=70.91  E-value=2.4  Score=37.03  Aligned_cols=52  Identities=33%  Similarity=0.721  Sum_probs=37.2

Q ss_pred             HHHHHHHHHcCCEEEEEEecccccccCCceeecCCCCccCCeeEEEEEeCCCCCCccEEEEEccCCCCCC--CCceEEEE
Q 018568          240 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWG--ADGYFKIK  317 (354)
Q Consensus       240 ~~ik~~l~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG--~~Gy~~i~  317 (354)
                      +.|+++|.+..||...-. +                 ..++||-+|=||.    +..||  .--||  ||  -+|||++.
T Consensus       254 ~~i~~eL~~~rPV~~~G~-~-----------------~~~GHawviDGy~----~~~y~--H~NwG--WgG~~nGyy~~~  307 (335)
T d1dkia_         254 AQIDKELSQNQPVYYQGV-G-----------------KVGGHAFVIDGAD----GRNFY--HVNWG--WGGVSDGFFRLD  307 (335)
T ss_dssp             HHHHHHHHTTCCEEEEEE-E-----------------TTEEEEEEEEEEC----SSSEE--EEECS--STTTTCEEEESC
T ss_pred             HHHHHHHhcCCCEEEEec-c-----------------CCCceEEEEcccc----CCCEE--EEEec--cCCCcCceEEec
Confidence            568889999999976531 1                 1148999999997    23454  55677  66  48999984


No 26 
>d2nn6h3 d.51.1.1 (H:168-293) Ribosomal RNA-processing protein 4, RRP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.60  E-value=8  Score=28.41  Aligned_cols=13  Identities=23%  Similarity=0.445  Sum_probs=10.6

Q ss_pred             CCCCceEEEEccC
Q 018568          308 WGADGYFKIKRGS  320 (354)
Q Consensus       308 WG~~Gy~~i~~g~  320 (354)
                      .|-|||+||+...
T Consensus        30 LG~NGyIWIs~~~   42 (126)
T d2nn6h3          30 LGNNGFIWIYPTP   42 (126)
T ss_dssp             EETTTEEEEECCC
T ss_pred             EecCCEEEeeCCc
Confidence            5889999998743


No 27 
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster) [TaxId: 7943]}
Probab=24.34  E-value=7.9  Score=28.62  Aligned_cols=14  Identities=21%  Similarity=0.427  Sum_probs=11.5

Q ss_pred             EEEEEccC--CCCCCC
Q 018568          297 YWILANQW--NRSWGA  310 (354)
Q Consensus       297 ywivkNSW--G~~WG~  310 (354)
                      --||+|||  |..||.
T Consensus        55 ~~iV~Ns~~~g~~Wg~   70 (134)
T d1is3a_          55 NVLVLNSLVHNVGWQQ   70 (134)
T ss_dssp             SEEEEEEEETTTEECC
T ss_pred             CEEEEcCcccCCCccc
Confidence            35999998  778996


No 28 
>d1ziva1 d.3.1.3 (A:28-337) Calpain large subunit, catalytic domain (domain II) {Human (Homo sapiens), calpain 9 [TaxId: 9606]}
Probab=22.75  E-value=72  Score=26.36  Aligned_cols=70  Identities=16%  Similarity=0.170  Sum_probs=0.0

Q ss_pred             HHHHHHHHHcCCEEEEEEecccccccC---CceeecCCCCccCCeeEEEEEeCCCCCCc----cEEEEEccCCC------
Q 018568          240 EDIMAEIYKNGPVEVSFTVYEDFAHYK---SGVYKHITGDVMGGHAVKLIGWGTSDDGE----DYWILANQWNR------  306 (354)
Q Consensus       240 ~~ik~~l~~~gPV~v~~~~~~~f~~y~---~Giy~~~~~~~~~~Hav~iVGyg~~~~g~----~ywivkNSWG~------  306 (354)
                      +.|.+.+..+.-+++.+.....-..-.   .|+.        .+||-.|++.. ..+..    +...+||=||.      
T Consensus       191 ~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~Gl~--------~~HaY~Vl~~~-~v~~~~~~~~lv~LRNPwg~~ew~G~  261 (310)
T d1ziva1         191 EILEKALKRGSLLGCFIDTRSAAESEARTPFGLI--------KGHAYSVTGID-QVSFRGQRIELIRIRNPWGQVEWNGS  261 (310)
T ss_dssp             HHHHHHHHHTCEEEEECCCSSGGGTTCBCTTSCB--------TTCCEEEEEEE-EEEETTEEEEEEEEECCSSCCCCCST
T ss_pred             HHHHHHhhcCCEEEEEecCCCccchhhhhccCcc--------cceeEEEEEEE-EEeeCCceEEEEEEECCCCCcccCCC


Q ss_pred             ---------------------CCCCCceEEEEc
Q 018568          307 ---------------------SWGADGYFKIKR  318 (354)
Q Consensus       307 ---------------------~WG~~Gy~~i~~  318 (354)
                                           +-+++|-|||+.
T Consensus       262 ws~~s~~W~~~~~~~~~~~~~~~~ddG~Fwm~~  294 (310)
T d1ziva1         262 WSDSSPEWRSVGPAEQKRLCHTALDDGEFWMAF  294 (310)
T ss_dssp             TSTTCHHHHHSCHHHHHHTTCCCCSSSEEEEEH
T ss_pred             CCCCChhhhcCCHHHHHHhcCcCCCCCEEEeEH


Done!