Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>018571
MERNEAATKNKTTSLKKLDLYPVQNLTERNEATKNVTAFLKNLQFNSRLPHEKSKPPSLV
SLCLGIVGKHLEDIIGDLDEIAINFPVDIKIAIASIARRRKLLADDVIMSLADSSWEILD
ISGSDVSDFGLVKVAQMCKSLKAVDIRITAAGVSEFLLHCHSLETLRCGGSPRSNHAARR
CLGILKPKLNDVEGDSWEELVNTDIGHGAQSLRWFVWPNIDKDSIEMMSTECPRIIVNPK
PSPFGFRGFEVPREAFPDITLDDPFVNDIDPSAWAVPRFASMGISTSLLSPNELSMAEKF
RLAFVERDTRLAPKRAKNARQHQRRAEREWMETSTSAKAIALASKATKSLSSRK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018571
        (354 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2116307 - symbol:AT4G26980 "AT4G26980" species...   932  1.3e-93   1


>TAIR|locus:2116307 [details] [associations]
            symbol:AT4G26980 "AT4G26980" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009644 "response to high light intensity"
            evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
            evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR
            UniGene:At.22696 UniGene:At.48905 EMBL:BT022012 EMBL:BT024881
            EMBL:AK229050 IPI:IPI00542556 RefSeq:NP_194428.2
            ProteinModelPortal:Q501F5 EnsemblPlants:AT4G26980.1 GeneID:828806
            KEGG:ath:AT4G26980 TAIR:At4g26980 eggNOG:NOG304234
            HOGENOM:HOG000005756 InParanoid:Q501F5 OMA:TLRCGGC PhylomeDB:Q501F5
            ProtClustDB:CLSN2680108 Genevestigator:Q501F5 Uniprot:Q501F5
        Length = 343

 Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
 Identities = 190/325 (58%), Positives = 229/325 (70%)

Query:    14 SLKKLDLYPVQNLTERNEATKN---VTAFLKNLQFNSRLPHEKSKPPSLVSLCLGIVGKH 70
             SLK LDL    N T R    +N   V+A++ +    SR+   KSKPPSLVS CLG++GKH
Sbjct:     8 SLKNLDL----N-TNRGRGPENKILVSAYVSS----SRMSPLKSKPPSLVSSCLGVIGKH 58

Query:    71 LEDIIGDLDEIAINFPVDXXXXXXXXXXXXXXXXDDVIMSLADSSWEILDISGSDVSDFG 130
             LED+I  L EI++ FP D                DDVI+ LADSSWEILD+SGSDV++FG
Sbjct:    59 LEDMIRCLAEISVIFPADIKMSIAAIARRKKLLDDDVIICLADSSWEILDVSGSDVTNFG 118

Query:   131 LVKVAQMCKSLKAVDI----RITAAGVSEFLLHCHSLETLRCGGSPRSNHAARRCLGILK 186
             L KVA++CKSL+AVDI    +I++ GV E + HC SLETLRCGG P S   ARR L I K
Sbjct:   119 LAKVAEICKSLRAVDISRCNKISSMGVLELVQHCRSLETLRCGGCPSSESTARRSLSIFK 178

Query:   187 PKLNDVEGDSWEELVNTDIGHGAQSLRWFVWPNIDKDSIEMMSTECPRIIVNPKPSPFGF 246
             P L++VEG++WEE+  ++IGHG QSLRW VWP IDKDS+EM+S+ECPRI+VNPKPS   +
Sbjct:   179 PNLSNVEGETWEEIDTSEIGHGGQSLRWLVWPRIDKDSLEMLSSECPRIVVNPKPSLVAY 238

Query:   247 RGFEVPREAFPDITLDDPFVNDIDPSAWAVPRFASMGISTSLLSPNELSMAEKFRLAFVE 306
             R  EVPREA PD+ LD+PFV DIDP  W V         TS    NELS+AEKFRLAF E
Sbjct:   239 RADEVPREALPDVALDEPFVKDIDPKTWVVTGVVQK--PTSFPLSNELSIAEKFRLAFAE 296

Query:   307 RDTRLAPKRAKNARQHQRRAEREWM 331
             RD R+APKRAKNARQ QRRAER+WM
Sbjct:   297 RDARMAPKRAKNARQRQRRAERDWM 321


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      354       318   0.00083  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  232 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.88u 0.09s 23.97t   Elapsed:  00:00:02
  Total cpu time:  23.88u 0.09s 23.97t   Elapsed:  00:00:02
  Start:  Mon May 20 19:55:52 2013   End:  Mon May 20 19:55:54 2013

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