Query 018572
Match_columns 354
No_of_seqs 182 out of 562
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 10:08:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018572.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018572hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04188 Mannosyl_trans2: Mann 100.0 1.7E-70 3.7E-75 555.7 28.0 312 10-329 2-313 (443)
2 KOG2647 Predicted Dolichyl-pho 100.0 2.4E-67 5.1E-72 514.6 21.3 318 1-327 5-325 (444)
3 COG5542 Predicted integral mem 100.0 1.2E-28 2.6E-33 242.6 17.7 233 70-325 72-307 (420)
4 PF13231 PMT_2: Dolichyl-phosp 98.8 6.4E-07 1.4E-11 76.9 18.2 117 94-222 3-127 (159)
5 TIGR03766 conserved hypothetic 98.6 8.5E-06 1.8E-10 84.3 22.2 142 70-222 90-248 (483)
6 PF02366 PMT: Dolichyl-phospha 98.3 0.00012 2.6E-09 68.6 18.9 97 123-219 82-191 (245)
7 TIGR03663 conserved hypothetic 97.6 0.012 2.7E-07 60.4 21.2 134 70-217 24-170 (439)
8 COG1807 ArnT 4-amino-4-deoxy-L 97.5 0.012 2.6E-07 61.4 19.6 113 94-218 65-186 (535)
9 PLN02841 GPI mannosyltransfera 97.0 0.037 7.9E-07 56.8 17.3 175 10-224 9-184 (440)
10 PRK13279 arnT 4-amino-4-deoxy- 97.0 0.12 2.5E-06 54.8 21.5 107 94-211 63-181 (552)
11 PF09594 DUF2029: Protein of u 97.0 0.052 1.1E-06 49.7 16.2 65 158-222 58-122 (241)
12 PF03901 Glyco_transf_22: Alg9 96.8 0.089 1.9E-06 53.2 18.1 93 132-225 90-195 (418)
13 PF09852 DUF2079: Predicted me 96.8 0.043 9.3E-07 56.3 15.9 98 124-221 60-160 (449)
14 COG1287 Uncharacterized membra 96.7 0.11 2.4E-06 57.1 18.4 121 85-212 79-214 (773)
15 PF02516 STT3: Oligosaccharyl 96.3 0.14 3.1E-06 52.3 15.5 137 84-227 61-210 (483)
16 PLN02816 mannosyltransferase 95.6 3.2 6.8E-05 44.1 22.4 88 133-221 128-225 (546)
17 PF10131 PTPS_related: 6-pyruv 95.5 1.6 3.5E-05 46.9 20.1 82 128-210 28-119 (616)
18 PF06728 PIG-U: GPI transamida 95.5 1.2 2.6E-05 45.0 18.0 100 126-225 83-194 (382)
19 PF11028 DUF2723: Protein of u 95.2 1.3 2.7E-05 40.3 15.4 127 89-222 12-164 (178)
20 KOG3359 Dolichyl-phosphate-man 95.1 1.2 2.7E-05 48.2 17.4 199 70-271 59-281 (723)
21 TIGR03459 crt_membr carotene b 94.8 0.89 1.9E-05 47.2 14.9 129 90-228 140-270 (470)
22 COG1928 PMT1 Dolichyl-phosphat 94.7 0.8 1.7E-05 49.5 14.6 199 70-271 48-269 (699)
23 KOG3893 Mannosyltransferase [C 94.2 0.34 7.4E-06 47.9 9.8 90 131-220 103-193 (405)
24 COG3463 Predicted membrane pro 93.1 1.4 2.9E-05 45.3 12.1 92 127-218 91-184 (458)
25 PF04922 DIE2_ALG10: DIE2/ALG1 92.4 4.7 0.0001 40.9 15.0 71 153-223 91-162 (379)
26 PF03155 Alg6_Alg8: ALG6, ALG8 91.8 4.4 9.5E-05 42.3 14.2 166 66-262 71-244 (469)
27 COG4346 Predicted membrane-bou 91.3 5.6 0.00012 40.0 13.5 89 133-222 164-253 (438)
28 PF05007 Mannosyl_trans: Manno 88.6 2.4 5.2E-05 40.8 8.5 51 174-224 5-55 (259)
29 COG5305 Predicted membrane pro 85.1 58 0.0012 34.8 17.9 83 90-184 94-179 (552)
30 PF14897 EpsG: EpsG family 80.9 52 0.0011 31.2 14.9 130 73-219 24-157 (330)
31 PF05208 ALG3: ALG3 protein; 80.4 16 0.00034 37.0 10.3 104 157-269 108-214 (368)
32 PF09586 YfhO: Bacterial membr 79.9 1E+02 0.0022 34.0 17.7 83 126-208 92-180 (843)
33 KOG2576 Glucosyltransferase - 76.7 18 0.00039 37.1 9.5 100 126-226 104-206 (500)
34 COG5650 Predicted integral mem 74.5 5.2 0.00011 42.1 5.2 87 176-272 218-304 (536)
35 KOG2762 Mannosyltransferase [C 74.1 43 0.00093 33.9 11.2 108 153-268 132-241 (429)
36 KOG2642 Alpha-1,2 glucosyltran 72.3 42 0.00091 34.0 10.6 71 156-227 116-187 (446)
37 PHA02898 virion envelope prote 45.0 83 0.0018 25.5 6.0 28 248-277 51-78 (92)
38 PHA03048 IMV membrane protein; 37.7 1.3E+02 0.0029 24.4 6.2 25 248-274 50-74 (93)
39 PRK13375 pimE mannosyltransfer 35.7 5.1E+02 0.011 26.7 14.2 27 191-217 167-193 (409)
40 KOG2552 Major facilitator supe 34.3 4.1E+02 0.0089 27.1 10.3 69 154-222 145-214 (388)
41 KOG2575 Glucosyltransferase - 31.5 6.2E+02 0.014 26.4 12.6 101 123-226 138-243 (510)
42 KOG2927 Membrane component of 29.0 56 0.0012 32.9 3.3 16 91-106 204-219 (372)
43 COG5617 Predicted integral mem 28.8 8.8E+02 0.019 27.3 14.8 128 70-219 54-195 (801)
44 KOG2920 Predicted methyltransf 25.2 35 0.00076 33.3 1.1 40 281-320 123-163 (282)
No 1
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=100.00 E-value=1.7e-70 Score=555.73 Aligned_cols=312 Identities=39% Similarity=0.669 Sum_probs=267.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHhhcccCccc
Q 018572 10 TQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQ 89 (354)
Q Consensus 10 ~~vl~~~l~sRl~~lll~~~~~~~~p~~DtS~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~WDa~~F~~IA~~GY~~e~ 89 (354)
++|++.++++|+++++++++.+....|+|++..+.++..+.+. ...++..++.++++.||||+||++||+|||++||
T Consensus 2 ~~~~~~~~~~r~l~lll~~l~~~~~~~~~t~~~l~~~~~~~~~---~~~~~~~~~~l~~l~rWDa~~F~~IA~~GY~~E~ 78 (443)
T PF04188_consen 2 KGVVKFFVLSRILQLLLQILFPGLLFDTSTSLLLDPPCSSAPS---SLIDSFVNRLLWGLVRWDAVYFLRIAEHGYSYEH 78 (443)
T ss_pred CcccccchHHHHHHHHHHHHHhCcCCCCChHhhcCCCcccCCC---cchHhHHHHHHhcccchhHHHHHHHHHhCCCccc
Confidence 5688999999999999999998666667777767666531221 1123456778888999999999999999999999
Q ss_pred cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhH
Q 018572 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (354)
Q Consensus 90 ~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasi 169 (354)
+|||||+||.++|.++.....++.+.++.......+|+++||+++.++++.+|+++++.++|++.|..++++++++|+++
T Consensus 79 ~~AFfPl~P~lvr~~~~~~~~~l~~~l~~~~~l~~~~~~vs~~~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~Pasi 158 (443)
T PF04188_consen 79 EWAFFPLYPLLVRLLSKSLLSPLYGLLSVGSALLNSGILVSNVAFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPASI 158 (443)
T ss_pred cccccCcHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHHH
Confidence 99999999999999995544444444444455667899999999999999999999999999999999999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 018572 170 FYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGA 249 (354)
Q Consensus 170 f~sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 249 (354)
|++++||||+|++++++|++.+++++++.|++++++|+++||||+++++++.++.++..+....++++..+.++.++..+
T Consensus 159 F~sa~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~RsnGll~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 238 (443)
T PF04188_consen 159 FLSAPYSESLFALLSFAGLYLLERGRWWLAGLLFALATLTRSNGLLLAGFFAYELLGIYYLDLRQLRRQRRLVRALISAI 238 (443)
T ss_pred HhhcCccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999988876643333334444567777788
Q ss_pred HhhHHhhhhHHHHHHHhhhhccCCCCCCCCCCcccCCCCchhHHHHhhcccccccccceeeccccCCchhhhhhhcccCc
Q 018572 250 LRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYCFFQCQGSGFLEVLPIQTVAKLSSCVTNVNP 329 (354)
Q Consensus 250 l~~~~v~~Pf~~~q~y~Y~~fC~~~~~~~~~pWC~~~~P~iYs~VQ~~Y~~~~~WnvGFl~Y~~~~qiPn~~~~~~~~~~ 329 (354)
++++++++|++++|+|+|.+||++++.++.+|||++++|++|+|||+|| ||||||||||+||||||++|+-.+-.
T Consensus 239 l~~~~i~~pf~~~q~~~y~~fC~~~~~~~~~~WC~~~~P~~Ys~vQ~~Y-----WnvGfl~Yw~~~niPnFlla~P~~~l 313 (443)
T PF04188_consen 239 LSGLLIFLPFVLFQYYAYYRFCPPRSFGDEPPWCNNTIPSIYSFVQSHY-----WNVGFLRYWTLKNIPNFLLALPMLLL 313 (443)
T ss_pred hhhHHHHHHHHHHHHHHHhhcCCCCCCCCCchhhhccCccchHHHHHHH-----HccchHHhccccccchHHHHHHHHHH
Confidence 8899999999999999999999987653447999999999999999999 99999999999999999988765543
No 2
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=100.00 E-value=2.4e-67 Score=514.63 Aligned_cols=318 Identities=33% Similarity=0.571 Sum_probs=274.1
Q ss_pred CCCCCCcchHH--HHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHH
Q 018572 1 METLNFPHETQ--VFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFV 78 (354)
Q Consensus 1 ~~~~~~~~~~~--vl~~~l~sRl~~lll~~~~~~~~p~~DtS~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~WDa~~F~ 78 (354)
||++.+ ...+ +.+.++.+|+.+++++.+.+...-|.++++.+.+|+...++ ....|...++.++++.+|||+||+
T Consensus 5 ~e~~~~-~~~~~~~~~~~~~sRl~v~lLq~i~~~~~~~~~~~~~~n~p~~~~~~--s~~~~~~~~~~l~~l~~WDa~~FL 81 (444)
T KOG2647|consen 5 LESRDK-STLEYFVTRYAVFSRLIVLLLQFLANIAAIPDHTSDAFNLPRLSPRQ--SSFEDVVVKRLLGGLLSWDAEYFL 81 (444)
T ss_pred hhccCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhhcchhccccc--chHHHHHHHHHHhccchhhHHHHH
Confidence 455444 3344 89999999999999999998544345666778877754432 223355677899999999999999
Q ss_pred HHhhcccCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHH
Q 018572 79 RIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCA 158 (354)
Q Consensus 79 ~IA~~GY~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~a 158 (354)
+||||||.+||++||+||+|..+|.+. .+..++.+.++......++|+.+|+.++.+++..||++++..++|++.+..|
T Consensus 82 ~iae~gy~fEh~~AF~pl~P~~v~~~~-~~~~~~~~~l~~~~~~~i~~~~vn~~~f~la~~~Lyql~~~~~~~~k~s~~a 160 (444)
T KOG2647|consen 82 FIAEHGYLFEHELAFFPLFPFVVRLVT-EVLRPIEPVLSLRSILLISAVLVNIFFFMLAAVALYQLTRIILHDPKISFYA 160 (444)
T ss_pred HHHhhchHHhhhHHhccccHHHHHHHH-HhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHhhh
Confidence 999999999999999999999999998 4446777878887788899999999999999999999999999999999999
Q ss_pred HHHHHHcchhHHHhhhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHH-HHHhhhh
Q 018572 159 SLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYD-ALFLKKR 237 (354)
Q Consensus 159 all~~~~Pasif~sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l~~~~~-~~~~~~~ 237 (354)
+++||+|||+||++++||||+|+++++.|++.+++++...+.+++++++++||||+++++++.+...+..+. ...+.+|
T Consensus 161 ~liFcfnPAsIF~ts~YSEsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~~rSngil~~~~~~~~~~~~~F~~~L~~~~r 240 (444)
T KOG2647|consen 161 ALLFCFNPASIFLTAGYSESLFALFSFLGILFLEKGRQFTGTLLFSLATLVRSNGILSAGFLMHSQNRGFFIFSLTMLNR 240 (444)
T ss_pred hheeEecchHhhhhHHhhHHHHHHHHHHHHHHHhcCCccceehHHHHHHHHHhhhhhhHHHHhhhhcceeeeeehHhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999998875443322 1112233
Q ss_pred hHHHHHHHHHHHHhhHHhhhhHHHHHHHhhhhccCCCCCCCCCCcccCCCCchhHHHHhhcccccccccceeeccccCCc
Q 018572 238 HFLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYCFFQCQGSGFLEVLPIQTV 317 (354)
Q Consensus 238 ~~~~~~~~~~~~l~~~~v~~Pf~~~q~y~Y~~fC~~~~~~~~~pWC~~~~P~iYs~VQ~~Y~~~~~WnvGFl~Y~~~~qi 317 (354)
....++.++..+++++++.+|+..+|||+|++||++++.+|.+|||..++|.+|+|||+|| ||||||||||+|||
T Consensus 241 ~~~~~~~i~~~~l~~l~~~~p~~~~qyy~y~~fC~~~~~~e~spwC~~~~p~~Ys~IQ~~Y-----W~VGflkYwt~knI 315 (444)
T KOG2647|consen 241 LRQLFKQIVSLFLSILTFLLPLAAFQYYGYKLFCPPRTAWEKSPWCFGILPLIYSYIQSHY-----WNVGFLKYWTLKNI 315 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCCccccCcccceeeccchHHHHHHh-----cccceeeecccccC
Confidence 3345678888899999999999999999999999999888889999999999999999999 99999999999999
Q ss_pred hhhhhhhccc
Q 018572 318 AKLSSCVTNV 327 (354)
Q Consensus 318 Pn~~~~~~~~ 327 (354)
||+..++-..
T Consensus 316 PNFLlalP~i 325 (444)
T KOG2647|consen 316 PNFLLALPVI 325 (444)
T ss_pred chHHHHhHHH
Confidence 9998887543
No 3
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=99.96 E-value=1.2e-28 Score=242.58 Aligned_cols=233 Identities=17% Similarity=0.241 Sum_probs=184.6
Q ss_pred ccccHHHHHHHhhcccCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018572 70 IVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMIL 149 (354)
Q Consensus 70 ~~WDa~~F~~IA~~GY~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~ 149 (354)
.+||+.+.+..-..++...|+-+|+|++|.-+|.++..... -...+++.+.||+++.+++..+|+++++.+
T Consensus 72 ~~w~af~~~~~~f~~~~k~~~~~~~p~~~y~i~ii~~L~~~---------~~~~l~~~l~s~~~~~~~ay~lY~~tk~~y 142 (420)
T COG5542 72 VHWYAFIALNGGFVRVLKSHFADYFPLYLYWIRIINKLLSS---------LYFILAIKLFSNIADFVAAYFLYKITKLRY 142 (420)
T ss_pred HHHHHHHHhhhhhhhhhhccccccCchHHHHHHHHHHHHhh---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55666555555555555668889999999999999876421 124789999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHcchhHHHhhhc--hHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q 018572 150 KDPDAALCASLLFCFNPASIFYTSIY--SESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQ 227 (354)
Q Consensus 150 ~~~~~A~~aall~~~~Pasif~sa~Y--tEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l~~ 227 (354)
++.+.|..+..+++++|+++++++.| |||+|++++++|+|+..+++...|++++++|+++||||++.++++++++.++
T Consensus 143 ~~~~~a~fa~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~~faLa~l~Rsngi~~~p~fl~~~ik~ 222 (420)
T COG5542 143 GLGSMARFATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALFFFALATLFRSNGIFLSPLFLIPLIKN 222 (420)
T ss_pred ccchhhhheEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHHHHHHHHHhccchhHHHHHHHHHHHhh
Confidence 98899999999999999999999999 9999999999999999999999999999999999999999999999987764
Q ss_pred HHHHHHhhhhh-HHHHHHHHHHHHhhHHhhhhHHHHHHHhhhhccCCCCCCCCCCcccCCCCchhHHHHhhccccccccc
Q 018572 228 AYDALFLKKRH-FLAMWILVCGALRCICIFAPFISFQVYGYFNMCLGRSPDEMRPWCKAKVPLLYNFIQSHYCFFQCQGS 306 (354)
Q Consensus 228 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~v~~Pf~~~q~y~Y~~fC~~~~~~~~~pWC~~~~P~iYs~VQ~~Y~~~~~Wnv 306 (354)
.. .+.... ..........++....+..|..--++.+|.+.|++ =+||++..|++|++||+|| |||
T Consensus 223 ~~---ik~i~~~l~~~~l~~~~ll~~~~~~~~~~~~~~~~y~~~~~~------f~~~~~~~~~iy~~I~~~~-----w~v 288 (420)
T COG5542 223 RK---IKIIWYLLPSGSLTYLSLLMPAWILGRNAFEIFLGYWRQSNG------FKEQGKNAPNIYSWIPNNY-----WNV 288 (420)
T ss_pred hh---HHHhhhhhhhHHHHHHHHHHHHHHhCccchhhhhhhhccccc------chHHHhcchHHHHhhccce-----eee
Confidence 21 000000 00011111222333334455555566677777765 3599999999999999999 999
Q ss_pred ceeeccccCCchhhhhhhc
Q 018572 307 GFLEVLPIQTVAKLSSCVT 325 (354)
Q Consensus 307 GFl~Y~~~~qiPn~~~~~~ 325 (354)
|+.+||+.+|+||+.-.+-
T Consensus 289 g~~~~~~~~~~~~~lf~~l 307 (420)
T COG5542 289 GLPKYWISNNIPNFLFILL 307 (420)
T ss_pred eeeEEeeccCCccHHHHHH
Confidence 9999999999999955443
No 4
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=98.81 E-value=6.4e-07 Score=76.88 Aligned_cols=117 Identities=20% Similarity=0.203 Sum_probs=95.6
Q ss_pred cccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHHhh
Q 018572 94 LPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTS 173 (354)
Q Consensus 94 fPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~sa 173 (354)
.|+++.+++.....++ . ...+.-++|.+++.++.+.+|++.++.++ ++.+..+++++++.|..+..+.
T Consensus 3 pPl~~~~~~~~~~l~G--------~---~~~~~~~~~~l~~~~~~~~~y~i~r~~~~-~~~a~~~~l~~~~~p~~~~~~~ 70 (159)
T PF13231_consen 3 PPLYFLLLALFFKLFG--------D---SVWALRLFNILFSLLTLLLIYLIARRLFG-RRAALIAALLLALSPMFIFYSA 70 (159)
T ss_pred ChHHHHHHHHHHHHhC--------c---CHHHHHHHHHHHHHHHHHHHHHHHHHHCC-chHHHHHHHHHHHhHHHHHHHH
Confidence 4899999998877642 1 13566788999999999999999999975 8999999999999999887765
Q ss_pred -hchHHHHHHHHHHHHHHHHh----cc---hHHHHHHHHHHHhhcchhhHHHHHHHH
Q 018572 174 -IYSESLYALFSVGGLYYLMS----GA---LNISVLWLAISGCARSNGVLNAGYFCF 222 (354)
Q Consensus 174 -~YtEslF~~ls~~gl~~~~~----~~---~~~A~l~~~lA~~~RsnGil~~~~~~~ 222 (354)
..+|++..++...+++...+ ++ +.+++++.+++..+|+++++..+.++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k~~~~~~~~~~~~ 127 (159)
T PF13231_consen 71 SARPDMLLLFFFLLALYAFYRYIKSKKWRWWILAGLLLGLAFLTKYTFLLLIPALLL 127 (159)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77799999999888887743 22 357889999999999999987775443
No 5
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=98.59 E-value=8.5e-06 Score=84.30 Aligned_cols=142 Identities=19% Similarity=0.154 Sum_probs=99.0
Q ss_pred ccccHHHHHHHhhcccC--ccccccccc---cHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 018572 70 IVWDSVYFVRIAQCGYE--YEQSYAFLP---LLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRL 144 (354)
Q Consensus 70 ~~WDa~~F~~IA~~GY~--~e~~~AFfP---l~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L 144 (354)
..||.....+.|.+|-. +++-.+.+| ++....+.+...++ .. .....-++|.++..++.+++|++
T Consensus 90 p~~D~~~v~~~A~~~~~~~~~~Y~~~yPnn~g~~l~~~~l~kifg--------~~--~~~~~~llNil~~~~si~liy~i 159 (483)
T TIGR03766 90 IGWDAGAVHTAATKSNESSISNYFSRNPNNLFLLLFMHFLYKLFG--------ET--SWLFFDVVNIVLVDLSALILYKA 159 (483)
T ss_pred cCcCHHHHHHHHhcCCCcccCceeeECCchHHHHHHHHHHHHHhC--------cc--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56888888888875421 112233344 45555565555432 11 13445778888999999999999
Q ss_pred HHHHhCChhHHHHHHHHHHHcchhHHH-hhhchHHHHHHHHHHHHHHHH---hcc--------hHHHHHHHHHHHhhcch
Q 018572 145 SVMILKDPDAALCASLLFCFNPASIFY-TSIYSESLYALFSVGGLYYLM---SGA--------LNISVLWLAISGCARSN 212 (354)
Q Consensus 145 ~~~~~~~~~~A~~aall~~~~Pasif~-sa~YtEslF~~ls~~gl~~~~---~~~--------~~~A~l~~~lA~~~Rsn 212 (354)
++++++ ++.|..+++++++.|+-..+ ..+|||....++..+++++.. +++ ...+|++.+++...|||
T Consensus 160 ~k~lf~-~~~a~~a~~l~~l~~~~~~y~~~~Ysd~~~l~~~~l~l~~~~~~~~~~~~~~~~~~~Il~gillal~~~iKp~ 238 (483)
T TIGR03766 160 VKKVFN-KKKAFVALYLFVLLLALSPYILIPYTDTWVLPFVSLFLFLYTVISKKTDLRKKIALSILLGVLLAIAYFIKPS 238 (483)
T ss_pred HHHHhC-chhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999995 57899999998888876654 579999999888777755332 211 14788999999999999
Q ss_pred hhHHHHHHHH
Q 018572 213 GVLNAGYFCF 222 (354)
Q Consensus 213 Gil~~~~~~~ 222 (354)
|++..+.++.
T Consensus 239 ~iI~liA~~i 248 (483)
T TIGR03766 239 AIIFVIAIFI 248 (483)
T ss_pred chHHHHHHHH
Confidence 9998765443
No 6
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=98.25 E-value=0.00012 Score=68.61 Aligned_cols=97 Identities=20% Similarity=0.215 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHHh-hhchHHHHHHHHHHHHHHHHhc-------
Q 018572 123 GLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSG------- 194 (354)
Q Consensus 123 ~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~s-a~YtEslF~~ls~~gl~~~~~~------- 194 (354)
..+.-++|.++..++++++|.+.++..+|++.|..++++++++|.-+..+ ..-+|+...+++.++++.+.+.
T Consensus 82 ~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr~~~~D~~l~~f~~la~~~~~~~~~~~~~~ 161 (245)
T PF02366_consen 82 YWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSRYALLDSILLFFILLAIYCLLRWYRYQPFR 161 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 45667889999999999999999999989999999999999999999876 4779999887777776655433
Q ss_pred -c----hHHHHHHHHHHHhhcchhhHHHHH
Q 018572 195 -A----LNISVLWLAISGCARSNGVLNAGY 219 (354)
Q Consensus 195 -~----~~~A~l~~~lA~~~RsnGil~~~~ 219 (354)
+ ..++++..|+|.+++.+|++..+.
T Consensus 162 ~~~~~~~~l~gi~lGla~~~K~~~~~~~~~ 191 (245)
T PF02366_consen 162 RKWWLWLLLAGIALGLAILTKGPGLLLVLP 191 (245)
T ss_pred cccHHHHHHHHHHHHHHHHhchhHHHHHHH
Confidence 1 246788999999999999875543
No 7
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=97.58 E-value=0.012 Score=60.36 Aligned_cols=134 Identities=18% Similarity=0.214 Sum_probs=90.7
Q ss_pred ccccHHHHHHHh----hcc-cCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 018572 70 IVWDSVYFVRIA----QCG-YEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRL 144 (354)
Q Consensus 70 ~~WDa~~F~~IA----~~G-Y~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L 144 (354)
..||-.+|-.++ ++| |.++. ....|+++.++......++ .. ..++-+.+.+++ +.++++|.+
T Consensus 24 ~~~DEa~ya~~a~~ml~~g~~~~~p-~~h~Pll~wl~A~~~~lFG--------~s---e~a~RL~~aL~g-~~v~l~~~~ 90 (439)
T TIGR03663 24 FHHDEAIHASFILKLLETGVYSYDP-AYHGPFLYHITAAVFHLFG--------IS---DATARLLPAVFG-VLLPLTAWL 90 (439)
T ss_pred CCCCchhHHHHHHHHHhcCCCCcCC-CCCCCHHHHHHHHHHHHhC--------CC---HHHHHHHHHHHH-HHHHHHHHH
Confidence 356655555544 334 34432 2346888888877665532 11 245666666666 446667888
Q ss_pred HHHHhCChhHHHHHHHHHHHcchhHHHh-hhchHHHHHHHHHHHHHHHHh----cc---hHHHHHHHHHHHhhcchhhHH
Q 018572 145 SVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMS----GA---LNISVLWLAISGCARSNGVLN 216 (354)
Q Consensus 145 ~~~~~~~~~~A~~aall~~~~Pasif~s-a~YtEslF~~ls~~gl~~~~~----~~---~~~A~l~~~lA~~~RsnGil~ 216 (354)
.++.+ +++.+..++++.+++|.-+..+ ..-+|.+..++..++++.+.+ ++ ..++++.++++.+++.++.+.
T Consensus 91 ~r~~~-~~~~al~AAllla~sp~~~~~sr~~~~D~~l~~f~~lal~~l~r~~~~~~~~~~~lag~~~gLa~ltKg~~~l~ 169 (439)
T TIGR03663 91 YRKRL-GDNEVLWAAVLLAFSPVMVYYSRFMRNDIFVAFFTLLAVGAAFRYLDTGKRRYLFLAASALALAFTSKENAYLI 169 (439)
T ss_pred HHHHc-CcHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777 5678999999999999998665 466888888877777766533 11 257889999999999997664
Q ss_pred H
Q 018572 217 A 217 (354)
Q Consensus 217 ~ 217 (354)
.
T Consensus 170 ~ 170 (439)
T TIGR03663 170 I 170 (439)
T ss_pred H
Confidence 4
No 8
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=97.46 E-value=0.012 Score=61.43 Aligned_cols=113 Identities=21% Similarity=0.174 Sum_probs=83.9
Q ss_pred cccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHHh-
Q 018572 94 LPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT- 172 (354)
Q Consensus 94 fPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~s- 172 (354)
-|+..++.......+ |. ...+.-+.++++..+++++.|.++++.+++ +.|..|++++...|.-+..+
T Consensus 65 PPl~~Wl~a~~~~lf--------G~---~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~-~~a~~aali~~~~p~~~~~~~ 132 (535)
T COG1807 65 PPLVYWLQALSYLLF--------GV---NEWSARLPSALAGALTALLVYWLAKRLFGR-LAALLAALILLLTPLFFLIGR 132 (535)
T ss_pred CcHHHHHHHHHHHHc--------Cc---chHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHhH
Confidence 567766666555443 21 235566677788888899999999999965 89999999999999988776
Q ss_pred hhchHHHHHHHHHHHHHHHH---hc--c---hHHHHHHHHHHHhhcchhhHHHH
Q 018572 173 SIYSESLYALFSVGGLYYLM---SG--A---LNISVLWLAISGCARSNGVLNAG 218 (354)
Q Consensus 173 a~YtEslF~~ls~~gl~~~~---~~--~---~~~A~l~~~lA~~~RsnGil~~~ 218 (354)
..-+++..+++..++++.+. ++ + .+..++..|++.+++.++.+..+
T Consensus 133 ~~~~D~~l~~f~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg~~~~~l~ 186 (535)
T COG1807 133 LALLDAALAFFLTLALALLYLALRARGKLKWLLLLGLALGLGFLTKGPGALLLP 186 (535)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhchHHHHHH
Confidence 45578877777766666553 32 1 25668899999999998888766
No 9
>PLN02841 GPI mannosyltransferase
Probab=97.05 E-value=0.037 Score=56.81 Aligned_cols=175 Identities=15% Similarity=0.194 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccHHHHHHHhhcccCccc
Q 018572 10 TQVFKSAAVSRLLLLALIVLWRALLSPYDTSAPLNPNCLVDPHQQQHSPNSSIGSRIESSIVWDSVYFVRIAQCGYEYEQ 89 (354)
Q Consensus 10 ~~vl~~~l~sRl~~lll~~~~~~~~p~~DtS~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~WDa~~F~~IA~~GY~~e~ 89 (354)
+.++..+++.|++.+.. ... .|...+..-+ + .+...-.||.++..--..=|+- +
T Consensus 9 ~~vll~a~~lRl~L~~y---g~~----~D~~~eVsyt----d--------------idY~vftDga~lv~~G~SPY~r-~ 62 (440)
T PLN02841 9 RSLLLASALLRVALIVY---GEW----QDAHMEVRYT----D--------------VDYLVFSDAAALVASGKSPFAR-D 62 (440)
T ss_pred HHHHHHHHHHHHHHHHH---HHH----hccCcccccc----c--------------cchHHHHHHHHHHHcCCCCCCC-C
Confidence 67888888899887662 211 3433222211 1 1223457999887655544432 5
Q ss_pred cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhH
Q 018572 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (354)
Q Consensus 90 ~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasi 169 (354)
+.-.-|+.-.++ +.... . + ...|=++=.++-++++..++++.+..-.+++.+...+.++.+||-.+
T Consensus 63 TYrytPLLa~Ll--lPn~~---~----~-----~~fgk~LF~l~Dll~a~ll~~il~~~~~~~~~~~~~a~~wL~NPlti 128 (440)
T PLN02841 63 TYRYSPLLALLL--VPNSL---L----H-----RSWGKFLFSAADLLVGLFIHTILRLRGVPEKVCTWSVMVWLFNPFTF 128 (440)
T ss_pred CCCcChHHHHHH--cchhh---h----h-----hhHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHhCcHHH
Confidence 677788877666 11110 0 0 01122223356677788888887644333445556677899999999
Q ss_pred HHh-hhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q 018572 170 FYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQT 224 (354)
Q Consensus 170 f~s-a~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~ 224 (354)
-.+ ..=+|++-.++....++.+.+++...|+++.|+++-.|---++.+.+++...
T Consensus 129 ~istrGSse~i~~~lvl~~L~~l~~g~~~~Aa~~lglavhfkiYPiIy~~Pi~l~l 184 (440)
T PLN02841 129 TIGTRGNCEPIVCAVILWILICLMNGRLLQAAFWYGLVVHFRIYPIIYALPIILVL 184 (440)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Confidence 765 5889999999999999999999999999999999999988888887766543
No 10
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=97.04 E-value=0.12 Score=54.84 Aligned_cols=107 Identities=12% Similarity=0.046 Sum_probs=72.5
Q ss_pred cccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHHh-
Q 018572 94 LPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT- 172 (354)
Q Consensus 94 fPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~s- 172 (354)
-|+..+++......+ |. ...+.-+.|.++..++++..|.++++.++|++.|..|++++..+|.-...+
T Consensus 63 PPL~yWl~Als~~LF--------G~---~~~a~RLpsaL~~~lt~llvy~larrl~~~r~~AllAaLIlls~~~v~~~g~ 131 (552)
T PRK13279 63 PIAGYWINSIGQWLF--------GD---NNFGVRFGSVFSTLLSALLVYWLALRLWRDRRTALLAALIYLSLFLVYGIGT 131 (552)
T ss_pred CcHHHHHHHHHHHHc--------CC---CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 567667766655443 21 135667778888889999999999999989999999999988777544322
Q ss_pred hhchHHHHHHHHHH---HHHHHHhc-----c---hHHHHHHHHHHHhhcc
Q 018572 173 SIYSESLYALFSVG---GLYYLMSG-----A---LNISVLWLAISGCARS 211 (354)
Q Consensus 173 a~YtEslF~~ls~~---gl~~~~~~-----~---~~~A~l~~~lA~~~Rs 211 (354)
..-.++..+++... +++...+. + +...|+..|++.+++.
T Consensus 132 ~a~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~lllGla~Glg~LTKG 181 (552)
T PRK13279 132 YAVLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYLLLGLACGMGFMTKG 181 (552)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHhcc
Confidence 23347765555443 44444321 1 2456777889999995
No 11
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=96.95 E-value=0.052 Score=49.67 Aligned_cols=65 Identities=18% Similarity=0.095 Sum_probs=54.4
Q ss_pred HHHHHHHcchhHHHhhhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHH
Q 018572 158 ASLLFCFNPASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCF 222 (354)
Q Consensus 158 aall~~~~Pasif~sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~ 222 (354)
...+.++.|.-.-+....+|.+..++...+++..+|+|.+.||++.+++++++..+++...+++.
T Consensus 58 ~~~~~~~~p~~~~~~~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~K~~p~~~l~~ll~ 122 (241)
T PF09594_consen 58 ALLLLAFPPVLSALGLGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAIKLYPALLLPALLI 122 (241)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566677775556678999999999999999999999999999999999999999987775443
No 12
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.84 E-value=0.089 Score=53.21 Aligned_cols=93 Identities=20% Similarity=0.221 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHHh-hhchHHHHHHHHHHHHHHHHh-----------cc-hHH
Q 018572 132 VAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMS-----------GA-LNI 198 (354)
Q Consensus 132 i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~s-a~YtEslF~~ls~~gl~~~~~-----------~~-~~~ 198 (354)
+....+-..+|++.++.. +++.|..+.++.++++...+.+ -..+|++-+.++..+++...+ ++ ...
T Consensus 90 ~~s~~~d~~~~~~~~~~~-~~~~a~~~l~l~~~s~~~~~~~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~~~~~~~~~~ 168 (418)
T PF03901_consen 90 LLSALSDYYLYRLVKRLF-GSSVALWALLLSLFSWFMFYYSSRTLSNSFETILVLLALYLWLRSLSRSNSSSSSKRYLLA 168 (418)
T ss_pred HHHHHHHHHHHHHHHHHh-CCchhhhhhhHHHhhhHHHHhhcccCccHHHHHHHHHHHHHHHHhhccCCCcccccchHHH
Confidence 444556667888777777 4577888888888988888765 599999999999999988875 22 356
Q ss_pred HHHHHHHHHhhcchhhHHHHHHHHHHH
Q 018572 199 SVLWLAISGCARSNGVLNAGYFCFQTM 225 (354)
Q Consensus 199 A~l~~~lA~~~RsnGil~~~~~~~~~l 225 (354)
.+.+.+++...|++..+..+++....+
T Consensus 169 ~~~l~~~~~~~Rpt~~~~~~pl~l~~l 195 (418)
T PF03901_consen 169 IGLLAGLAVFFRPTSALFWLPLGLYLL 195 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888999999999888887765544
No 13
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=96.82 E-value=0.043 Score=56.34 Aligned_cols=98 Identities=20% Similarity=0.235 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHHh--hhchHHHHHHHHHHHHHHHHhcchHHHHH
Q 018572 124 LAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT--SIYSESLYALFSVGGLYYLMSGALNISVL 201 (354)
Q Consensus 124 ~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~s--a~YtEslF~~ls~~gl~~~~~~~~~~A~l 201 (354)
..-.++-.++..++++.+|++.++...+++.|...++.|.++|+-.-.. --..|.+..-+.+.+++.++++|+..+.+
T Consensus 60 ~tLli~Qal~la~~~~pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~ 139 (449)
T PF09852_consen 60 LTLLIVQALLLALGAIPLYRLARRRLLSRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFIL 139 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3445566777888899999999999878999999999999999877432 23567777677788888888999999999
Q ss_pred HHHHHHhhcch-hhHHHHHHH
Q 018572 202 WLAISGCARSN-GVLNAGYFC 221 (354)
Q Consensus 202 ~~~lA~~~Rsn-Gil~~~~~~ 221 (354)
+..++.++|.. |+..+++-+
T Consensus 140 ~~ll~llvKEd~~l~v~~~gl 160 (449)
T PF09852_consen 140 WALLLLLVKEDLGLTVAGIGL 160 (449)
T ss_pred HHHHHHHHHhhHHHHHHHHHH
Confidence 99999999954 555444433
No 14
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=96.66 E-value=0.11 Score=57.13 Aligned_cols=121 Identities=21% Similarity=0.220 Sum_probs=82.4
Q ss_pred cCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHH
Q 018572 85 YEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCF 164 (354)
Q Consensus 85 Y~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~ 164 (354)
|.+....-|-|+++.++...+..++. ..+ .....++...-.+...++++..|.+++++. +++.+..++++..+
T Consensus 79 YP~G~~i~~~pl~~~l~~~~~~~~~~----~~~--~~~~~~~~~~PailG~L~vI~vYl~~r~i~-~~~~g~~aa~ll~~ 151 (773)
T COG1287 79 YPPGSPIDFPPLFLYLTAALGLILGS----IFP--VSLETAALLFPAILGVLTVIPVYLLGRRIL-GDKTGLLAALLLAL 151 (773)
T ss_pred CCCCCCCCCCchHHHHHHHHHHHHHc----cCc--hHHHHHHHHhhHHHhhHHHHHHHHHHHHHh-cchhhHHHHHHHHH
Confidence 55554555999999999998876532 112 234566667777888889999999999988 67888899999999
Q ss_pred cchhHHHhh-hc-----hHHHHHHHHHHHHHHHHh-----cch----HHHHHHHHHHHhhcch
Q 018572 165 NPASIFYTS-IY-----SESLYALFSVGGLYYLMS-----GAL----NISVLWLAISGCARSN 212 (354)
Q Consensus 165 ~Pasif~sa-~Y-----tEslF~~ls~~gl~~~~~-----~~~----~~A~l~~~lA~~~Rsn 212 (354)
.|+-+.=+. .+ .|.++..+++.++....+ ++. .+|++..++..++=+.
T Consensus 152 ~p~~~~rt~~G~~d~~~~~~~~~~~~l~~~~~aL~~~~~~~~~~~~~~lag~~~~l~~~sW~g 214 (773)
T COG1287 152 APGYLSRTVAGFYDTDMFELLLPLFALFFFLLALKAAKKLKKPVIYALLAGLALGLLALAWGG 214 (773)
T ss_pred hhHHHHHhhcCccCCCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHHHhCc
Confidence 999333232 22 566777777766665544 132 3556666666665554
No 15
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=96.27 E-value=0.14 Score=52.34 Aligned_cols=137 Identities=18% Similarity=0.199 Sum_probs=73.6
Q ss_pred ccCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHH
Q 018572 84 GYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFC 163 (354)
Q Consensus 84 GY~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~ 163 (354)
.|.+.++.-+.|++|.+.-.+...+.. .+. .....++..+--+...+.++..|.++++ .+|++.+..|+++.+
T Consensus 61 ~yP~G~~i~~~pl~~~l~~~~~~~~~~-----~~~-~~l~~v~~~~ppvl~~L~vi~~y~~~~~-~~~~~~Gl~aA~l~a 133 (483)
T PF02516_consen 61 WYPWGRPIDWPPLFPYLTAAFYAILGG-----FGP-VSLYEVAFWLPPVLGALTVIPVYLLGRR-LGGRKAGLLAAFLLA 133 (483)
T ss_dssp ---TTS---TT-HHHHHHHHHHHS-SS------HH-----HHHHHHHHHHGGGGHHHHHHHHHH-TT-HHHHHHHHHHHT
T ss_pred cCCCCCccCcccHHHHHHHHHHHHHHH-----hcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCchHHHHHHHHH
Confidence 455555556889999996666655321 111 1122333444455566667788998855 568999999999999
Q ss_pred HcchhHHHh-hhc-----hHHHHHHHHHHHHHHHHhcch------HHHHHHHHHHHhhcchh-hHHHHHHHHHHHHH
Q 018572 164 FNPASIFYT-SIY-----SESLYALFSVGGLYYLMSGAL------NISVLWLAISGCARSNG-VLNAGYFCFQTMHQ 227 (354)
Q Consensus 164 ~~Pasif~s-a~Y-----tEslF~~ls~~gl~~~~~~~~------~~A~l~~~lA~~~RsnG-il~~~~~~~~~l~~ 227 (354)
+.|+-+.=| ++| .|.+|.++++..+....+++. .++|+..++...+=..+ ++..+++....+..
T Consensus 134 ~~p~~l~RT~~G~~D~~~~~~~f~~l~~~~~~~a~~~~~~~~~~~~laGl~~~l~~~~W~g~~~~~~~~~~~~~~~~ 210 (483)
T PF02516_consen 134 ISPGYLSRTMAGFYDHHMLELFFPLLIIYFFLLALKSAKRPLIYAVLAGLALGLYALAWGGYQVFLLIFILLFVIYQ 210 (483)
T ss_dssp TSHHHHHTSSTT--SGGGGTTHHHHHHHHHHHHHHHH------THHHHHHHHHHHHHHHS-GGHHHHHHHHHHHHHH
T ss_pred HhHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 999943322 354 355666665555443333332 35666666666666666 66555555544433
No 16
>PLN02816 mannosyltransferase
Probab=95.63 E-value=3.2 Score=44.11 Aligned_cols=88 Identities=18% Similarity=0.219 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHH-hhhchHHHHHHHHHHHHHHHH---------hcchHHHHHH
Q 018572 133 AFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFY-TSIYSESLYALFSVGGLYYLM---------SGALNISVLW 202 (354)
Q Consensus 133 ~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~-sa~YtEslF~~ls~~gl~~~~---------~~~~~~A~l~ 202 (354)
...++-..+|++.++.++ ++.|..+.++-+.+|...++ +-.++.++-+.++..+++..- ..+.-.+-.+
T Consensus 128 ~sal~D~~l~kl~~~~~g-~~~A~~~L~~sl~swf~~y~~sRTfSNslEt~Lt~lAL~~w~~~~~~~~~~~~~~~~~L~l 206 (546)
T PLN02816 128 FSAIGDLYLYKLSDALYG-GNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSIDYPVNRKWGLVI 206 (546)
T ss_pred HHHHHHHHHHHHHHHHcC-chHHHHHHHHHHHHHHHHHhhCccchhHHHHHHHHHHHHHhhccccccccccchhhHHHHH
Confidence 334455678888888774 56677776666778877766 679999999999999998752 1122234456
Q ss_pred HHHHHhhcchhhHHHHHHH
Q 018572 203 LAISGCARSNGVLNAGYFC 221 (354)
Q Consensus 203 ~~lA~~~RsnGil~~~~~~ 221 (354)
.++|+..|+..++...+++
T Consensus 207 a~la~~iRPt~ailwl~l~ 225 (546)
T PLN02816 207 AALACAIRPTSAVIWLYVG 225 (546)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6788889988887666554
No 17
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=95.54 E-value=1.6 Score=46.91 Aligned_cols=82 Identities=20% Similarity=0.310 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhH---HHhhhchHHHHHHH---HHHHHHHHHhcc----hH
Q 018572 128 IVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI---FYTSIYSESLYALF---SVGGLYYLMSGA----LN 197 (354)
Q Consensus 128 lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasi---f~sa~YtEslF~~l---s~~gl~~~~~~~----~~ 197 (354)
++-.+++.+.++..|++.++..+ +..|..+++++.++|.-. +....++|.+...+ .+++++.+.+++ +.
T Consensus 28 l~~~L~~~l~~~~~Y~~~R~~~~-~~~A~l~aiLyl~~py~l~~~y~rgni~e~lA~~llPlvll~~~~~~~~~~~r~~~ 106 (616)
T PF10131_consen 28 LFIFLAFFLGGLGMYFLGRRLGR-RKAAILAAILYLFSPYHLRNIYWRGNIPETLAFALLPLVLLFLYRFIKKRKYRYWI 106 (616)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCchhHH
Confidence 33345666778889999988775 889999999999999765 34578899964333 344444443322 24
Q ss_pred HHHHHHHHHHhhc
Q 018572 198 ISVLWLAISGCAR 210 (354)
Q Consensus 198 ~A~l~~~lA~~~R 210 (354)
..++.+++..++.
T Consensus 107 ~lAl~~all~lsH 119 (616)
T PF10131_consen 107 LLALSMALLALSH 119 (616)
T ss_pred HHHHHHHHHHHHh
Confidence 4566777777776
No 18
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=95.50 E-value=1.2 Score=45.04 Aligned_cols=100 Identities=18% Similarity=0.245 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCh-----------hHHHHHHHHHHHcchhHHHhh-hchHHHHHHHHHHHHHHHHh
Q 018572 126 GYIVSNVAFLFAAVYFYRLSVMILKDP-----------DAALCASLLFCFNPASIFYTS-IYSESLYALFSVGGLYYLMS 193 (354)
Q Consensus 126 g~lvs~i~~~~a~~~Ly~L~~~~~~~~-----------~~A~~aall~~~~Pasif~sa-~YtEslF~~ls~~gl~~~~~ 193 (354)
.-++-.++-++++..+++..+...+++ ......+.+|.+||-++.-.. .=|.++..++....++...+
T Consensus 83 ~~llf~~~Dl~~A~~L~~i~~~~~~~~~~~~~~~~~~~~~~~lv~~~YLfNP~tIlscva~ST~~f~nl~i~~sl~~a~~ 162 (382)
T PF06728_consen 83 ISLLFILVDLLIAWLLYRIAKSYQKQESKRQKSPNEKSSSPWLVAAFYLFNPLTILSCVALSTTVFTNLFILLSLYFAVK 162 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCchhcccchHHHHHHHHHCHHHHHHHHhcccHHHHHHHHHHHHHHHHc
Confidence 334445788889999999975543221 356678889999999997654 44677777888888888899
Q ss_pred cchHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 018572 194 GALNISVLWLAISGCARSNGVLNAGYFCFQTM 225 (354)
Q Consensus 194 ~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l 225 (354)
++...|++..++|+..+..-+.+..+++....
T Consensus 163 g~~~~s~i~lAlatylSlYpi~Ll~Plll~l~ 194 (382)
T PF06728_consen 163 GNVFLSAISLALATYLSLYPILLLPPLLLLLY 194 (382)
T ss_pred CCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999998887665433
No 19
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=95.19 E-value=1.3 Score=40.34 Aligned_cols=127 Identities=15% Similarity=0.180 Sum_probs=72.1
Q ss_pred ccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------hhHH
Q 018572 89 QSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKD-------------PDAA 155 (354)
Q Consensus 89 ~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~-------------~~~A 155 (354)
-..+-.||||.-+=.-. .+ +-+ +..+ ......-++|.++..+++..+|....+..++ ...+
T Consensus 12 LgV~HPPGyPlf~llg~-lf-~~l-p~~~---~ia~~vNl~Sal~sA~tv~~l~~~~~~l~~~~~~~~~~~~~~~~~~a~ 85 (178)
T PF11028_consen 12 LGVPHPPGYPLFTLLGR-LF-SLL-PDFG---NIAWRVNLLSALSSALTVLFLFWSITRLLRKLPEEPSTAQTIAILGAG 85 (178)
T ss_pred cCCCCCCCcHHHHHHHH-HH-HHc-CCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHH
Confidence 35566788887653221 11 001 1011 1233344677888888888999988777654 2356
Q ss_pred HHHHHHHHHcchhHHHhhhchHH-----HHHHHHHHHHHHHHhc-------ch-HHHHHHHHHHHhhcchhhHHHHHHHH
Q 018572 156 LCASLLFCFNPASIFYTSIYSES-----LYALFSVGGLYYLMSG-------AL-NISVLWLAISGCARSNGVLNAGYFCF 222 (354)
Q Consensus 156 ~~aall~~~~Pasif~sa~YtEs-----lF~~ls~~gl~~~~~~-------~~-~~A~l~~~lA~~~RsnGil~~~~~~~ 222 (354)
..+++.|.++|.- .+++.=+|. +|..+.+..++..+++ |+ .+.+.+.|++....-..++....+++
T Consensus 86 lv~al~fafS~sf-W~~Av~aEVYal~~l~~al~~~l~l~w~~~~~~~~~~r~l~l~afl~GLs~g~H~~~ll~lP~~~~ 164 (178)
T PF11028_consen 86 LVGALAFAFSDSF-WFQAVEAEVYALSSLFTALLLWLLLKWEREADEPRSDRWLLLIAFLCGLSLGVHLLNLLALPAIAL 164 (178)
T ss_pred HHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888888764 444544442 3333333333333332 23 35667788888777666665554443
No 20
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.14 E-value=1.2 Score=48.22 Aligned_cols=199 Identities=16% Similarity=0.129 Sum_probs=122.8
Q ss_pred ccccHHHHHHHhhccc--CccccccccccHHHHHHHHHHhhhcc--cc-cccchh---hhHHHHHHHHHHHHHHHHHHHH
Q 018572 70 IVWDSVYFVRIAQCGY--EYEQSYAFLPLLPAFTHLLSRSVLAP--LI-GVIGYR---AVLGLAGYIVSNVAFLFAAVYF 141 (354)
Q Consensus 70 ~~WDa~~F~~IA~~GY--~~e~~~AFfPl~P~lvr~l~~~~~~~--l~-~~~~~~---~~~~~ag~lvs~i~~~~a~~~L 141 (354)
.-||-.||-+-+..=- ++.++.- .|+--+++...+...+.. .. ...|.. ..-...--.+|..+..+.+.++
T Consensus 59 VVwDE~HfGkf~S~Yl~~~ff~DvH-PPlgKmL~al~g~L~GydG~f~f~~~g~~~~~~~~y~~mR~f~a~lgsl~vp~~ 137 (723)
T KOG3359|consen 59 VVWDEAHFGKFASYYLNNIFFFDVH-PPLGKMLIALVGYLAGYDGSFDFQSIGEYYPNGVPYVGMRLFSALLGSLTVPLA 137 (723)
T ss_pred EEEecccccchHHHHhcCceeeccC-chHHHHHHHHHHHHhCCCCCccccCCCccCCCCCchHhHHHHHHHHHhHHHHHH
Confidence 6799999987774200 1112211 566666666666554210 00 001101 1123445567777777888889
Q ss_pred HHHHHHHhCChhHHHHHHHHHHHcchhHHHh-hhchHHHHHHHHHHHHHHHHhc-----c-----h----HHHHHHHHHH
Q 018572 142 YRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSG-----A-----L----NISVLWLAIS 206 (354)
Q Consensus 142 y~L~~~~~~~~~~A~~aall~~~~Pasif~s-a~YtEslF~~ls~~gl~~~~~~-----~-----~----~~A~l~~~lA 206 (354)
|...+....+...|..+++++++==+=+..+ -.--||+..++..++++.+.|- + | .+.|+..|+|
T Consensus 138 y~t~~~~~~s~~aa~l~allv~~dns~~T~sr~ILLDs~Llff~~~~~y~~~r~~~~~~~pfs~~W~~wL~~tGvsLgca 217 (723)
T KOG3359|consen 138 YLTLKELGFSRLAAALAALLVLFDNSLVTLSRFILLDSMLLFFMAAAVYCFVRFYTQRKRPFSLRWWKWLLLTGVSLGCA 217 (723)
T ss_pred HHHHHHhcccHHHHHHHHHHHhhcccchhhhhHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhhhe
Confidence 9888887767778888888887765555444 3567888888888888777541 1 2 2568888999
Q ss_pred HhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHhhHHhhhhHHHHHHHhhhhcc
Q 018572 207 GCARSNGVLNAGYFCFQTMHQAYDALFLKKRHF-LAMWILVCGALRCICIFAPFISFQVYGYFNMC 271 (354)
Q Consensus 207 ~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~v~~Pf~~~q~y~Y~~fC 271 (354)
..+.=.|++..+.+....+.+++...-..+.+. ..+|+++.-++ .+++.|+.++-..=|..|=
T Consensus 218 iSvK~vGlft~~~Vgl~~v~~LW~Ll~D~~~s~~~~~kh~~ar~~--~LI~iP~~iYl~~F~vHf~ 281 (723)
T KOG3359|consen 218 ISVKYVGLFTIALVGLYTVRELWCLLGDLGLSIKQIVKHLLARLF--FLIGIPFLIYLLFFYVHFS 281 (723)
T ss_pred eehhhhhHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 999999999988888888887775432223332 23455554333 3456688777655444443
No 21
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=94.83 E-value=0.89 Score=47.18 Aligned_cols=129 Identities=12% Similarity=0.106 Sum_probs=89.6
Q ss_pred cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhH
Q 018572 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (354)
Q Consensus 90 ~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasi 169 (354)
.--+.|++=.+-+.++...+... ..-.+.-=+++.+..++.+..+-||.++.-.|++. +..+...||--+
T Consensus 140 ~aPYGPl~l~i~~~v~~l~g~~i-------~~~v~~~Rl~~l~g~~l~~w~~~rLar~~g~~~~~---AlWL~~~NPLvi 209 (470)
T TIGR03459 140 TTPYGPLHLLVGQAITTVTGDNV-------TAGTLAFKLLSLPGLAVMVWAVPKLATHLGGNPTV---ALWLGVLNPLVV 209 (470)
T ss_pred CCCCChHHHHHHHHHHHHhCCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH---HHHHHHcCchhh
Confidence 34456666666666665432110 00012222344455555666777777766545544 344567899998
Q ss_pred HH--hhhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHH
Q 018572 170 FY--TSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQA 228 (354)
Q Consensus 170 f~--sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l~~~ 228 (354)
+- ...-.|++...+...|+++..|+++..++++.+++..++.++++..+|+.+..+.+.
T Consensus 210 ihlvgg~HnealM~gl~l~gl~~~~r~~~~~g~vli~~a~~VK~~a~l~Lpf~~~~~~~~~ 270 (470)
T TIGR03459 210 IHLIGGMHNEMLMVGLVSAGILLALKRRPVAGIALIAVAVALKATAGIALPFVVWIWVAHV 270 (470)
T ss_pred hhhhcchhHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence 53 358899999999999999999999888999999999999999999999887766543
No 22
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.68 E-value=0.8 Score=49.50 Aligned_cols=199 Identities=16% Similarity=0.138 Sum_probs=115.9
Q ss_pred ccccHHHHHHHhhcc--cCccccccccccHHHHHHHHHHhhh--cccc-cccc-hhh---hHHHHHHHHHHHHHHHHHHH
Q 018572 70 IVWDSVYFVRIAQCG--YEYEQSYAFLPLLPAFTHLLSRSVL--APLI-GVIG-YRA---VLGLAGYIVSNVAFLFAAVY 140 (354)
Q Consensus 70 ~~WDa~~F~~IA~~G--Y~~e~~~AFfPl~P~lvr~l~~~~~--~~l~-~~~~-~~~---~~~~ag~lvs~i~~~~a~~~ 140 (354)
.-||..||-+-|.+= .++.++. -.|+--+++...+...+ .+.+ ...| ..+ .-...--.+|.+...+...+
T Consensus 48 VVfdE~hfgkFaS~Yl~~~~~fDv-HPPL~kml~al~~~L~g~~g~f~f~~~g~~~~~~~~~y~~mR~f~A~lgsl~vpl 126 (699)
T COG1928 48 VVFDEAHFGKFASYYLNGTPFFDV-HPPLGKMLIALVGGLEGYDPPFDFQLIGLTEYPFGYNYVGMRFFNALLGSLTVPL 126 (699)
T ss_pred EEEeeeeeccchHHhhcCCccccc-CCcHHHHHHHhhhhhhccCCCcccccCCcccccCCCChHHHHHHHHHHHhHHHHH
Confidence 679999998888531 1122222 34555555544444321 0110 0000 000 11344556777777778888
Q ss_pred HHHHHHHHhCChhHHHHHHHHHHHcchhHHHh-hhchHHHHHHHHHHHHHHHHh--------cch----HHHHHHHHHHH
Q 018572 141 FYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMS--------GAL----NISVLWLAISG 207 (354)
Q Consensus 141 Ly~L~~~~~~~~~~A~~aall~~~~Pasif~s-a~YtEslF~~ls~~gl~~~~~--------~~~----~~A~l~~~lA~ 207 (354)
+|...++...+...+.+++++.++==+-+..+ -.--|++..++..++.+.+.+ .+| .+.|+.+|++.
T Consensus 127 ~y~t~r~~~~s~l~~~l~~llv~~dn~~~t~sR~ILLDs~LlfF~~~~~y~~~r~~~~~p~s~~w~~~Ll~tGisLGcai 206 (699)
T COG1928 127 VYLIARRIGYSRLVAALAGLLVAFDNSFVTESRFILLDSFLLFFIVAAAYCFLRFHRQQPFSRRWLKWLLLTGISLGCAI 206 (699)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhChhhHHHHHHHHHhcceeeeEE
Confidence 99988888777778888888887755554443 356677777776677666643 122 25678888999
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHhhHHhhhhHHHHHHHhhhhcc
Q 018572 208 CARSNGVLNAGYFCFQTMHQAYDALFLKKRHF-LAMWILVCGALRCICIFAPFISFQVYGYFNMC 271 (354)
Q Consensus 208 ~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~v~~Pf~~~q~y~Y~~fC 271 (354)
.+|=+|++..+.+....+.+++....-+..+. ..+|+++.-+.. ++..|+..+-..=|..|=
T Consensus 207 S~KwvGlft~~~vgl~~v~~lW~ll~dk~~s~~~~~kh~~~r~f~--Li~iP~~iyl~~F~vhf~ 269 (699)
T COG1928 207 SVKWVGLFTTGVVGLLAVYELWSLLYDKSVSWKQIIKHWLARFFG--LIIIPFDIYLLSFYVHFN 269 (699)
T ss_pred EeeehhHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHH--HHHHHHHHHHHHHhheee
Confidence 99999999888777766666664322222222 234555544432 355687766544334443
No 23
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=94.25 E-value=0.34 Score=47.88 Aligned_cols=90 Identities=18% Similarity=0.179 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHHhh-hchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhh
Q 018572 131 NVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYTS-IYSESLYALFSVGGLYYLMSGALNISVLWLAISGCA 209 (354)
Q Consensus 131 ~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~sa-~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~ 209 (354)
.++-++.+.++|||..+.--+++.|...+..+..||-....|+ +=.||.-+++.+.-++++.|+++..|++.-|++.-.
T Consensus 103 ~~~Dll~a~L~~kLl~~~~i~~~~a~~~~~fWLlNPl~aiIStRGNaesi~~~lvi~~lyllqK~~v~~A~l~~GlaIh~ 182 (405)
T KOG3893|consen 103 AIFDLLIATLIYKLLHMRSISRKQALIYASFWLLNPLTAIISTRGNAESIVAFLVILTLYLLQKSEVFLAGLAHGLAIHL 182 (405)
T ss_pred HHHHHHHHHHHHHHHhhhhcchhhhhHhhhhhhcCchheeeecCCchHHHHHHHHHHHHHHHHHhHHHHHHHHhhheeee
Confidence 4677788899999976333367889999999999999887664 999999999999999999999999999999999988
Q ss_pred cchhhHHHHHH
Q 018572 210 RSNGVLNAGYF 220 (354)
Q Consensus 210 RsnGil~~~~~ 220 (354)
|---+..+..+
T Consensus 183 KIYPliY~l~i 193 (405)
T KOG3893|consen 183 KIYPLIYSLAI 193 (405)
T ss_pred EechHHhhhhh
Confidence 87777655543
No 24
>COG3463 Predicted membrane protein [Function unknown]
Probab=93.13 E-value=1.4 Score=45.25 Aligned_cols=92 Identities=16% Similarity=0.248 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhH--HHhhhchHHHHHHHHHHHHHHHHhcchHHHHHHHH
Q 018572 127 YIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI--FYTSIYSESLYALFSVGGLYYLMSGALNISVLWLA 204 (354)
Q Consensus 127 ~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasi--f~sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~ 204 (354)
+++-.++-..++..+|++.++.+++++.|..-++++.+||.-. -.----+|+++..+.+++++++.|++|-+.-+...
T Consensus 91 ll~Q~i~ials~~p~y~lA~eil~~E~~al~isilYll~p~i~gi~~FDFH~m~~avp~~~~a~~f~~r~k~~l~li~lv 170 (458)
T COG3463 91 LLIQAIAIALSSLPIYLLAKEILNGEKEALAISILYLLNPYIEGINLFDFHPMAFAVPLFLLAYYFLKRKKWKLFLIFLV 170 (458)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcccHHHHHHHHHHHhchhccCchhhhcchHHHHHHHHHHHHHHHHhcchhHHHHHHH
Confidence 4455566667889999999999988999999999999999743 22245689999999999999999999887777777
Q ss_pred HHHhhcchhhHHHH
Q 018572 205 ISGCARSNGVLNAG 218 (354)
Q Consensus 205 lA~~~RsnGil~~~ 218 (354)
+.-++.+...+.++
T Consensus 171 lIl~tk~~a~liiI 184 (458)
T COG3463 171 LILLTKEDAFLIII 184 (458)
T ss_pred HHHHHhcccHHHHH
Confidence 77778887555444
No 25
>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family. The majority of the members are annotated as alpha-1,2 glucosyltransferas. The ALG10 protein from Saccharomyces cerevisiae (Baker's yeast) encodes the alpha-1,2 glucosyltransferase of the endoplasmic reticulum. This protein has been characterised in Rat as potassium channel regulator 1 [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane
Probab=92.41 E-value=4.7 Score=40.90 Aligned_cols=71 Identities=15% Similarity=0.194 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHcchhHHHh-hhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 018572 153 DAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQ 223 (354)
Q Consensus 153 ~~A~~aall~~~~Pasif~s-a~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~ 223 (354)
+.+...++..++.|--.|++ --||+.....+.+.+.+...+++.+.|++.+.+|...|-+-|+-+++++-.
T Consensus 91 ~~~~~~a~~ialfPllfFFsfLYYTDv~St~~VL~~yl~~~~~~~~~sal~g~~sv~fRQTNIvWv~f~~~~ 162 (379)
T PF04922_consen 91 RKAILSALNIALFPLLFFFSFLYYTDVWSTTFVLLMYLASLKRRHWLSALFGLLSVLFRQTNIVWVAFFAGG 162 (379)
T ss_pred HHHHHHHHHHHHhhHHHHhhHHHHhcHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 34455666777778888777 478999999998888877888888889999999999999999988876654
No 26
>PF03155 Alg6_Alg8: ALG6, ALG8 glycosyltransferase family; InterPro: IPR004856 N-linked (asparagine-linked) glycosylation of proteins is mediated by a highly conserved pathway in eukaryotes, in which a lipid (dolichol phosphate)-linked oligosaccharide is assembled at the endoplasmic reticulum membrane prior to the transfer of the oligosaccharide moiety to the target asparagine residues. This oligosaccharide is composed of Glc(3)Man(9)GlcNAc(2). The addition of the three glucose residues is the final series of steps in the synthesis of the oligosaccharide precursor. Alg6 transfers the first glucose residue, and Alg8 transfers the second one []. In the human alg6 gene, a C-T transition, which causes Ala333 to be replaced with Val, has been identified as the cause of a congenital disorder of glycosylation, designated as type Ic OMIM:603147 []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0005789 endoplasmic reticulum membrane
Probab=91.79 E-value=4.4 Score=42.27 Aligned_cols=166 Identities=17% Similarity=0.205 Sum_probs=96.3
Q ss_pred hhccccc--cHHHHHHHhhcccCccccccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 018572 66 IESSIVW--DSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYR 143 (354)
Q Consensus 66 l~~l~~W--Da~~F~~IA~~GY~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~ 143 (354)
++...++ |.++..-+..+||+.++.-.| +|. .++++-+....+++..+.
T Consensus 71 lg~~a~~~~~p~~~~l~~s~g~~s~~~~~f-------~R~----------------------tVi~~d~~~~~~a~~~~~ 121 (469)
T PF03155_consen 71 LGKIAHFFIDPEWVALVSSRGYESPSHKLF-------MRL----------------------TVIVSDLLLYIPAVLFFC 121 (469)
T ss_pred HHhhccccCCchhhccCCCCCCCCHHHHHH-------HHH----------------------HHHHHHHHHHHHHHHHHH
Confidence 4555566 777766566677766544333 221 233333344444443333
Q ss_pred HHHHH--hCChhHHHHHHHHHHHcchhHHH---hhhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHH
Q 018572 144 LSVMI--LKDPDAALCASLLFCFNPASIFY---TSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAG 218 (354)
Q Consensus 144 L~~~~--~~~~~~A~~aall~~~~Pasif~---sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~ 218 (354)
-.... -++++....+.++..++|+=+.. .=-|.--+..++ ++++....+++...++++|+++-...-..+-.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~~PgLilIDH~HFQYN~~~lGl~-l~si~~~~~~~~l~~a~~F~~~Ln~Kqm~LY~Ap 200 (469)
T PF03155_consen 122 KSSGRSRNQSSKQRFIALLLILLNPGLILIDHGHFQYNGFLLGLL-LLSIAALIRGRYLLGAILFSLLLNFKQMFLYYAP 200 (469)
T ss_pred HHHHhhhccchhHHHHHHHHHHHCchHHhhhhhhhhHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211 12445566677788899998743 235765555554 6777778899999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhhhhhHH-HHHHHHHHHHhhHHhhhhHHHH
Q 018572 219 YFCFQTMHQAYDALFLKKRHFL-AMWILVCGALRCICIFAPFISF 262 (354)
Q Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~v~~Pf~~~ 262 (354)
.+....++...+.. +.+...+ ..+.-+..+...+++..||+..
T Consensus 201 ~~f~yLL~~c~~~~-~~~~~~~~~~~lg~~Vi~~f~~~~~PF~~~ 244 (469)
T PF03155_consen 201 AFFVYLLGSCFQRK-SFRFSIKRLIKLGIVVIATFALSFGPFLYS 244 (469)
T ss_pred HHHHHHHHHHcCCC-ccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77776776532110 0001111 1222222334455677888743
No 27
>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=91.27 E-value=5.6 Score=39.99 Aligned_cols=89 Identities=18% Similarity=0.191 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHHh-hhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcc
Q 018572 133 AFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARS 211 (354)
Q Consensus 133 ~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~s-a~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~Rs 211 (354)
-+.+..+++|...++..+++-.+..++++.++-|-=.-+. .+.-+-=-++++.+.++++..+|..+|++..|+|..++-
T Consensus 164 e~~liliiv~~~~~ki~~~~la~~~aA~~~alDp~l~amg~VAMLDIhvaFFtaL~~~fl~~~R~l~sgiAlGLAAs~K~ 243 (438)
T COG4346 164 EGALILIIVYFVAYKIARSPLAGLIAALLAALDPLLRAMGGVAMLDIHVAFFTALFMYFLANDRPLWSGIALGLAASVKL 243 (438)
T ss_pred hhhHHHHHHHHHHHHHhcCchHHHHHHHHHhhCcHHHHhcchhHHHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHhh
Confidence 3444455666666666667777788888888888655443 466666678888899999999999999999999999998
Q ss_pred hhhHHHHHHHH
Q 018572 212 NGVLNAGYFCF 222 (354)
Q Consensus 212 nGil~~~~~~~ 222 (354)
.|-+ +.++++
T Consensus 244 SG~~-vfpil~ 253 (438)
T COG4346 244 SGAF-VFPILW 253 (438)
T ss_pred cccc-hHHHHH
Confidence 8755 333444
No 28
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=88.64 E-value=2.4 Score=40.82 Aligned_cols=51 Identities=18% Similarity=0.225 Sum_probs=44.7
Q ss_pred hchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q 018572 174 IYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQT 224 (354)
Q Consensus 174 ~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~ 224 (354)
+=+||+-+++.++.++.+.+++...||++.|+|.-.|-=-+..+..+....
T Consensus 5 GnaEsl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHfKIYPiIY~~~~~l~l 55 (259)
T PF05007_consen 5 GNAESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHFKIYPIIYALPILLYL 55 (259)
T ss_pred cchHHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHhhhccHHHHHHHHHHH
Confidence 457999999999999999999999999999999999988888777665543
No 29
>COG5305 Predicted membrane protein [Function unknown]
Probab=85.11 E-value=58 Score=34.82 Aligned_cols=83 Identities=22% Similarity=0.234 Sum_probs=64.0
Q ss_pred cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhH
Q 018572 90 SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASI 169 (354)
Q Consensus 90 ~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasi 169 (354)
.-..-|+|..+++.-...+. ...+++--.|.+...++..++|-+++..+ +++.+..++.+++++|..+
T Consensus 94 ~~~~~PLYfll~h~W~~lF~-----------~s~~~~Rsls~L~~~~ai~~~y~l~r~l~-~~~~a~la~~~~AisP~~i 161 (552)
T COG5305 94 LLVHPPLYFLLAHFWMALFG-----------NSLLASRSLSALLSALAIPLVYWLGRELF-GSTTALLAAALMAISPFHI 161 (552)
T ss_pred cCCCCCeeehHHHHHHHHhc-----------hHHHHHHhHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHccChHHH
Confidence 45677899999999887752 12455666788888899999999999988 5777889999999999999
Q ss_pred HHh---hhchHHHHHHHH
Q 018572 170 FYT---SIYSESLYALFS 184 (354)
Q Consensus 170 f~s---a~YtEslF~~ls 184 (354)
+.+ -.|+=+.-..+.
T Consensus 162 ~~~qe~R~y~L~~~~~li 179 (552)
T COG5305 162 FYSQEARSYALAVATTLI 179 (552)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 875 366655554443
No 30
>PF14897 EpsG: EpsG family
Probab=80.86 E-value=52 Score=31.19 Aligned_cols=130 Identities=18% Similarity=0.153 Sum_probs=68.5
Q ss_pred cHHHHHHHhhcccCccc---cccccccHHHHHHHHHHhhhcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018572 73 DSVYFVRIAQCGYEYEQ---SYAFLPLLPAFTHLLSRSVLAPLIGVIGYRAVLGLAGYIVSNVAFLFAAVYFYRLSVMIL 149 (354)
Q Consensus 73 Da~~F~~IA~~GY~~e~---~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~~ 149 (354)
|-..|.+.-++.-..+. +..+=|++..+...+..... .. ..--.+.+ .+....++..-++..
T Consensus 24 D~~~Y~~~y~~~~~~~~~~~~~~~E~~~~~l~~~~~~~~~--------~~---~~~~~i~~----~i~~~~~~~~i~~~~ 88 (330)
T PF14897_consen 24 DYYNYYEIYDEISNNSFNFSEYGFEPGFYLLNYLFSYFGF--------NY---QFFFFIIS----FISLFLFFFFIKKYS 88 (330)
T ss_pred cHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHHCC--------CH---HHHHHHHH----HHHHHHHHHhHHHcc
Confidence 55566655554332221 15566899888888776431 11 11111122 122223333333333
Q ss_pred CChhHHHHHHHHHHHcchhHHH-hhhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHH
Q 018572 150 KDPDAALCASLLFCFNPASIFY-TSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGY 219 (354)
Q Consensus 150 ~~~~~A~~aall~~~~Pasif~-sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~ 219 (354)
++ .....+.+++ +.+..... ....=.++...+.+.|+....+++++.+.++..+|+...+.+++....
T Consensus 89 ~~-~~~~~~~~l~-~~~~~~~~~~~~iRq~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~fH~Saii~l~~ 157 (330)
T PF14897_consen 89 KN-YPIFLSLFLF-FSFFFFFYSFNQIRQSLAISFFLLALSYLYKKKWIKFILLVLLAILFHYSAIIFLPL 157 (330)
T ss_pred cc-hHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2122233333 22222222 234455666666677777777888888888888999999888775554
No 31
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=80.35 E-value=16 Score=37.01 Aligned_cols=104 Identities=17% Similarity=0.379 Sum_probs=69.3
Q ss_pred HHHHHHHHc--chhHHHhhhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHh
Q 018572 157 CASLLFCFN--PASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFL 234 (354)
Q Consensus 157 ~aall~~~~--Pasif~sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l~~~~~~~~~ 234 (354)
....+.+++ =-|||.--...+...+++...+++++.++||.++++++++|....-|.++.++.++.-.+..
T Consensus 108 ~~~~ll~lSkRlHSI~vLRlFND~~a~~~~~~ai~~~~~~~w~~g~~~yS~avSIKMN~LL~~Pall~~~l~~------- 180 (368)
T PF05208_consen 108 WLLILLCLSKRLHSIFVLRLFNDCFAMLFLYAAILLFQRRRWLLGSLLYSLAVSIKMNALLFAPALLVLLLQS------- 180 (368)
T ss_pred hHHHHHHHHHHHHHhhhhheecHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHc-------
Confidence 344444444 24666667778999999988999999999999999999999999999999888764433321
Q ss_pred hhhhHHHHHHH-HHHHHhhHHhhhhHHHHHHHhhhh
Q 018572 235 KKRHFLAMWIL-VCGALRCICIFAPFISFQVYGYFN 269 (354)
Q Consensus 235 ~~~~~~~~~~~-~~~~l~~~~v~~Pf~~~q~y~Y~~ 269 (354)
....+....+ +.+.+. +++..||....-.+|..
T Consensus 181 -~g~~~~~~~l~v~~~vQ-vllg~PFL~~~p~~Yl~ 214 (368)
T PF05208_consen 181 -LGLLKTLWYLAVCALVQ-VLLGLPFLLTNPWSYLS 214 (368)
T ss_pred -CCHHHHHHHHHHHHHHH-HHHhhHHHHhCHHHHHH
Confidence 1111112222 222222 45788999866556644
No 32
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=79.94 E-value=1e+02 Score=34.01 Aligned_cols=83 Identities=20% Similarity=0.290 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCh--hHHHHHHHHHHHcchhHHHh--hhchHHH-HHHHHHHHHHHHHh-cchHHH
Q 018572 126 GYIVSNVAFLFAAVYFYRLSVMILKDP--DAALCASLLFCFNPASIFYT--SIYSESL-YALFSVGGLYYLMS-GALNIS 199 (354)
Q Consensus 126 g~lvs~i~~~~a~~~Ly~L~~~~~~~~--~~A~~aall~~~~Pasif~s--a~YtEsl-F~~ls~~gl~~~~~-~~~~~A 199 (354)
-.++..+-..++.+..|.+.++..+++ ..+..++++|+++=..+... -...+++ +.-+.++|+--+.+ +++++=
T Consensus 92 ~~~~~~lk~~lag~~~~~~l~~~~~~~~~~~~~i~s~~Yafsg~~~~~~~~~~fld~~i~lPL~llgie~~~~~~k~~~~ 171 (843)
T PF09586_consen 92 ILLLIILKIGLAGLFFYLYLRKFKKSRSDWAALIGSLLYAFSGYVIYYSFNIMFLDAMILLPLLLLGIERLLKEKKWWLF 171 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhcCCcchh
Confidence 334444555677778888888888777 88999999999875555432 1223332 23345566654444 444333
Q ss_pred HHHHHHHHh
Q 018572 200 VLWLAISGC 208 (354)
Q Consensus 200 ~l~~~lA~~ 208 (354)
.+..+++..
T Consensus 172 ~~~~~l~~i 180 (843)
T PF09586_consen 172 IISLALALI 180 (843)
T ss_pred HHHHHHHHH
Confidence 333444443
No 33
>KOG2576 consensus Glucosyltransferase - Alg8p [Transcription]
Probab=76.70 E-value=18 Score=37.09 Aligned_cols=100 Identities=15% Similarity=0.247 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHcchhHHH---hhhchHHHHHHHHHHHHHHHHhcchHHHHHH
Q 018572 126 GYIVSNVAFLFAAVYFYRLSVMILKDPDAALCASLLFCFNPASIFY---TSIYSESLYALFSVGGLYYLMSGALNISVLW 202 (354)
Q Consensus 126 g~lvs~i~~~~a~~~Ly~L~~~~~~~~~~A~~aall~~~~Pasif~---sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~ 202 (354)
.++++-++.+.++---|+++.++-+|++.....+.+...+|+=++. .--|.--+|..+ ++.+..+.++|.++++..
T Consensus 104 SVIf~dll~~~~~rr~~~l~~kl~k~~~~~~~~a~ll~~s~gLlIvDhIHFQYNgfLfgil-LlSI~~l~~kr~l~~A~~ 182 (500)
T KOG2576|consen 104 SVIFSDLLLLYGLRRSYRLTSKLGKDQKQRFACAVLLLLSPGLLIVDHIHFQYNGFLFGIL-LLSIVFLKTKRYLLSAFL 182 (500)
T ss_pred hhHHHHHHHHHHHhhhhcccccCCcccccchHHHHHHHhCCCcEEEEEeeeecccHHHHHH-HHHHHHHhhhhHHHHHHH
Confidence 5666777766655457888888877888888899999999997753 347888888877 455556678888999998
Q ss_pred HHHHHhhcchhhHHHHHHHHHHHH
Q 018572 203 LAISGCARSNGVLNAGYFCFQTMH 226 (354)
Q Consensus 203 ~~lA~~~RsnGil~~~~~~~~~l~ 226 (354)
++..-..+-.=+-.+.-+.+..+|
T Consensus 183 fsvll~FKHIflY~ApaY~vylLr 206 (500)
T KOG2576|consen 183 FSVLLNFKHIFLYVAPAYFVYLLR 206 (500)
T ss_pred HHHHHhhhhheeeechhHHHHHHH
Confidence 888777665555544433333444
No 34
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=74.48 E-value=5.2 Score=42.10 Aligned_cols=87 Identities=15% Similarity=0.283 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhHHh
Q 018572 176 SESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYDALFLKKRHFLAMWILVCGALRCICI 255 (354)
Q Consensus 176 tEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 255 (354)
.+..-+++..+++.. |+|..+||+++|+++..+..-....+++++...++ + +.++ ..+-+..+++.-.++
T Consensus 218 ~DtI~~ffla~a~v~--r~rP~lAGvl~Gls~a~K~~P~Ivl~pll~~~~ke-y-----g~~~--a~~f~~~aa~t~lLv 287 (536)
T COG5650 218 FDTIWAFFLAAALVC--RGRPKLAGVLIGLSSAFKQIPLIVLPPLLYLIYKE-Y-----GLRP--AIKFIATAAITWLLV 287 (536)
T ss_pred hhHHHHHHHHHHHHh--cCCchHHHHHHHHHHHhhcCchhhHHHHHHHHHHh-c-----Ccch--HHHHHHHHHHHHHHH
Confidence 556666666666654 88889999999999999988888777776633321 0 1122 223333344455667
Q ss_pred hhhHHHHHHHhhhhccC
Q 018572 256 FAPFISFQVYGYFNMCL 272 (354)
Q Consensus 256 ~~Pf~~~q~y~Y~~fC~ 272 (354)
=+||++..=.+|.++-.
T Consensus 288 N~PfiI~~P~aw~~sil 304 (536)
T COG5650 288 NLPFIILGPRAWVESIL 304 (536)
T ss_pred cCceEEechHHHHHHHH
Confidence 78888776667766654
No 35
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=74.11 E-value=43 Score=33.94 Aligned_cols=108 Identities=14% Similarity=0.234 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHc--chhHHHhhhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHH
Q 018572 153 DAALCASLLFCFN--PASIFYTSIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQAYD 230 (354)
Q Consensus 153 ~~A~~aall~~~~--Pasif~sa~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l~~~~~ 230 (354)
+.......+.|++ =-|||.--...+++.+++....+....++||.++++.+++|..++-|-++.+.-+++-.+.+.
T Consensus 132 ~vPp~vlvL~~lskRiHSIfVLRLFND~fa~lll~~~i~~~l~qkw~~gs~~fSlAvSVKMNvLLyaPall~~lL~~~-- 209 (429)
T KOG2762|consen 132 RVPPWVLVLLCLSKRIHSIFVLRLFNDPFAMLLLYVAILLFLKQKWLVGSIFFSLAVSVKMNVLLYAPALLLLLLQNL-- 209 (429)
T ss_pred cCChHHHHHHHHHHHHHHhhhhHHhcchHHHHHHHHHHHHHHHHHHHhHhhhheeehhhhhhhHHHHHHHHHHHHHhc--
Confidence 3444445555554 346666677889999999999999888999999999999999999999998887666444321
Q ss_pred HHHhhhhhHHHHHHHHHHHHhhHHhhhhHHHHHHHhhh
Q 018572 231 ALFLKKRHFLAMWILVCGALRCICIFAPFISFQVYGYF 268 (354)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~~~v~~Pf~~~q~y~Y~ 268 (354)
+-++ .+..+...++-=+.+.+||....-.+|.
T Consensus 210 ---~~~~---tl~~L~v~~~vQilvg~PFLl~~p~~Yl 241 (429)
T KOG2762|consen 210 ---GPIG---TLLHLAVCILVQILVGLPFLLYFPSSYL 241 (429)
T ss_pred ---cHHH---HHHHHHHHHHHHHHHcCchHhhChHHHH
Confidence 1111 1122222222335578899877655554
No 36
>KOG2642 consensus Alpha-1,2 glucosyltransferase/transcriptional activator [Posttranslational modification, protein turnover, chaperones; Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=72.32 E-value=42 Score=34.02 Aligned_cols=71 Identities=18% Similarity=0.219 Sum_probs=56.8
Q ss_pred HHHHHHHHHcchhHHHh-hhchHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q 018572 156 LCASLLFCFNPASIFYT-SIYSESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCFQTMHQ 227 (354)
Q Consensus 156 ~~aall~~~~Pasif~s-a~YtEslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~~~l~~ 227 (354)
+.+..+-.+ |.-.+++ --|||.....+.+.+.....+|..+.++..++.+.++|-+-+.-+++.+...+.+
T Consensus 116 f~~~tl~sl-P~l~~fsfLfYTD~~St~~vllay~f~~~~n~~~SAfl~~~s~lfRQTNIIWa~fia~~viAs 187 (446)
T KOG2642|consen 116 FTASTLGSL-PILIFFSFLFYTDLGSTFFVLLAYLFCLYGNHKTSAFLGFCSFLFRQTNIIWAVFIAGNVIAS 187 (446)
T ss_pred eehhHHhhc-cHHHHHHHHHHHhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 334444444 5555544 6899999999999888888899999999999999999999999999988765543
No 37
>PHA02898 virion envelope protein; Provisional
Probab=44.99 E-value=83 Score=25.52 Aligned_cols=28 Identities=25% Similarity=0.409 Sum_probs=16.0
Q ss_pred HHHhhHHhhhhHHHHHHHhhhhccCCCCCC
Q 018572 248 GALRCICIFAPFISFQVYGYFNMCLGRSPD 277 (354)
Q Consensus 248 ~~l~~~~v~~Pf~~~q~y~Y~~fC~~~~~~ 277 (354)
+++.++++++..+. +-.|.+||.+..++
T Consensus 51 ~FIlgivl~lG~~i--fs~y~r~C~~~~~~ 78 (92)
T PHA02898 51 SFILAIILILGIIF--FKGYNMFCGGNTTD 78 (92)
T ss_pred HHHHHHHHHHHHHH--HHHHhhhcCCCccc
Confidence 34444455545443 44689999875433
No 38
>PHA03048 IMV membrane protein; Provisional
Probab=37.72 E-value=1.3e+02 Score=24.38 Aligned_cols=25 Identities=8% Similarity=0.018 Sum_probs=14.6
Q ss_pred HHHhhHHhhhhHHHHHHHhhhhccCCC
Q 018572 248 GALRCICIFAPFISFQVYGYFNMCLGR 274 (354)
Q Consensus 248 ~~l~~~~v~~Pf~~~q~y~Y~~fC~~~ 274 (354)
+++.++++.+..+. |-.|.+||.+.
T Consensus 50 ~FIlgivl~lG~~i--fsmy~r~C~~~ 74 (93)
T PHA03048 50 AFVLGIVMTIGMLI--YSMWGRYCTPS 74 (93)
T ss_pred HHHHHHHHHHHHHH--HHHHhcccCCC
Confidence 34444555545444 44688999864
No 39
>PRK13375 pimE mannosyltransferase; Provisional
Probab=35.74 E-value=5.1e+02 Score=26.70 Aligned_cols=27 Identities=11% Similarity=0.156 Sum_probs=21.7
Q ss_pred HHhcchHHHHHHHHHHHhhcchhhHHH
Q 018572 191 LMSGALNISVLWLAISGCARSNGVLNA 217 (354)
Q Consensus 191 ~~~~~~~~A~l~~~lA~~~RsnGil~~ 217 (354)
+.++|++.+|++.|+|+..+.+-.+..
T Consensus 167 ll~~r~~~aGvliGLAaaIKlTPavf~ 193 (409)
T PRK13375 167 VYSSRWWLSGLLVGLAAGVKLTPAITG 193 (409)
T ss_pred HhcCCccHHHHHHHHHHHhhhhhHHHH
Confidence 346777899999999999998866533
No 40
>KOG2552 consensus Major facilitator superfamily permease - Cdc91p [General function prediction only]
Probab=34.30 E-value=4.1e+02 Score=27.15 Aligned_cols=69 Identities=20% Similarity=0.182 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcchhHHHhhhch-HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcchhhHHHHHHHH
Q 018572 154 AALCASLLFCFNPASIFYTSIYS-ESLYALFSVGGLYYLMSGALNISVLWLAISGCARSNGVLNAGYFCF 222 (354)
Q Consensus 154 ~A~~aall~~~~Pasif~sa~Yt-EslF~~ls~~gl~~~~~~~~~~A~l~~~lA~~~RsnGil~~~~~~~ 222 (354)
...+++++|++||-++.-..+-| -+.-.+++...+|...+++..+++...++++---.+-+++..+.+.
T Consensus 145 i~~~v~l~Yl~NPlTilSCi~~St~~I~N~~v~~~ly~av~~~~~l~a~~la~~t~~s~yp~~L~~P~l~ 214 (388)
T KOG2552|consen 145 IGDLVALLYLFNPLTILSCIGLSTTVIENFAVAVSLYGAVTGRVPLAAFGLAIATHLSLYPATLTIPLLF 214 (388)
T ss_pred HHHHHHHHHHhCceeeeeeccccchHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 45689999999999997655443 3344555666777778889899999999998777777766555443
No 41
>KOG2575 consensus Glucosyltransferase - Alg6p [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=31.53 E-value=6.2e+02 Score=26.43 Aligned_cols=101 Identities=14% Similarity=0.141 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-Hh-CChhHHHHHHHHHHHcchhHHHh---hhchHHHHHHHHHHHHHHHHhcchH
Q 018572 123 GLAGYIVSNVAFLFAAVYFYRLSVM-IL-KDPDAALCASLLFCFNPASIFYT---SIYSESLYALFSVGGLYYLMSGALN 197 (354)
Q Consensus 123 ~~ag~lvs~i~~~~a~~~Ly~L~~~-~~-~~~~~A~~aall~~~~Pasif~s---a~YtEslF~~ls~~gl~~~~~~~~~ 197 (354)
--+.++++.+...+-++++|..... .. ++.+.+. +.+-.+.|+-+..- --| .+...-++..+...+.+++..
T Consensus 138 MR~TViisd~liy~Pa~ify~~~~~r~~~~~~~~a~--~~~iLl~P~L~LID~GHFQY-NsisLGl~~~ai~~ll~~~~~ 214 (510)
T KOG2575|consen 138 MRSTVIISDLLIYLPALIFYFKWLHRTRSKKSKIAY--AALILLYPSLLLIDHGHFQY-NSISLGLTLYAIAALLKNFYV 214 (510)
T ss_pred HHHHHHHHhHHHHhhHHHHHHHHhhhccCcccHHHH--HHHHHhCCceEEEecCccee-chhHHHHHHHHHHHHHHhHHH
Confidence 3456777888888888877776542 22 2233443 34556788865321 234 233444556677777788899
Q ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 018572 198 ISVLWLAISGCARSNGVLNAGYFCFQTMH 226 (354)
Q Consensus 198 ~A~l~~~lA~~~RsnGil~~~~~~~~~l~ 226 (354)
+++++|.+|-.-+-..+-.+.++....+.
T Consensus 215 ~as~~F~LAlnyKQMeLY~A~pfF~fLLg 243 (510)
T KOG2575|consen 215 LASVLFVLALNYKQMELYHALPFFAFLLG 243 (510)
T ss_pred HHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 99999999999888888888765555554
No 42
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.96 E-value=56 Score=32.91 Aligned_cols=16 Identities=19% Similarity=0.195 Sum_probs=11.3
Q ss_pred ccccccHHHHHHHHHH
Q 018572 91 YAFLPLLPAFTHLLSR 106 (354)
Q Consensus 91 ~AFfPl~P~lvr~l~~ 106 (354)
..=||+||..||....
T Consensus 204 ivLFPLWP~~mR~gvy 219 (372)
T KOG2927|consen 204 IVLFPLWPRRMRQGVY 219 (372)
T ss_pred HHhcccCcHHHhccee
Confidence 3458899988886543
No 43
>COG5617 Predicted integral membrane protein [Function unknown]
Probab=28.77 E-value=8.8e+02 Score=27.27 Aligned_cols=128 Identities=19% Similarity=0.191 Sum_probs=71.2
Q ss_pred ccccHHHHHHHhhcccCccccccccccHHHHHHHHHHhhhcccccccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 018572 70 IVWDSVYFVRIAQCGYEYEQSYAFLPLLPAFTHLLSRSVLAPLIGVIGYR-AVLGLAGYIVSNVAFLFAAVYFYRLSVMI 148 (354)
Q Consensus 70 ~~WDa~~F~~IA~~GY~~e~~~AFfPl~P~lvr~l~~~~~~~l~~~~~~~-~~~~~ag~lvs~i~~~~a~~~Ly~L~~~~ 148 (354)
.-||-.|| +||+ -.-|+|=+|.++-++...+. ++. ..+.+-.. +++++ ....|.+.+..
T Consensus 54 ~~w~~~WY-----~G~p---flrYypPl~Yli~aal~~l~-------~d~~~t~~v~~~----la~ll-G~~~~~~~r~~ 113 (801)
T COG5617 54 PPWCEYWY-----NGYP---FLRYYPPLSYLIGAALNFLL-------GDVVTTYAVFLM----LAFLL-GAGGWLLWRLR 113 (801)
T ss_pred CCcchhhh-----cCCC---cceecCcHHHHHHHHHHHhh-------cChhHHHHHHHH----HHHHH-HHHHHHHHHhh
Confidence 67888887 5775 34666767776665544321 211 11222222 22222 22234444444
Q ss_pred hCChhHHHHHHHHHHHcchhHHHhhhchHHHH-----HHHHHHHHHHH---H-hcch----HHHHHHHHHHHhhcchhhH
Q 018572 149 LKDPDAALCASLLFCFNPASIFYTSIYSESLY-----ALFSVGGLYYL---M-SGAL----NISVLWLAISGCARSNGVL 215 (354)
Q Consensus 149 ~~~~~~A~~aall~~~~Pasif~sa~YtEslF-----~~ls~~gl~~~---~-~~~~----~~A~l~~~lA~~~RsnGil 215 (354)
-..+..|.++++++.++|-.+ ...++|.-+ ..+..+.++++ . ++++ +.+++..++++.|.+.|-.
T Consensus 114 g~t~~ia~I~alL~ltsp~~l--~vlf~EGniP~v~~i~f~pl~l~~l~~~~~~Gkk~r~~l~~allmslv~~tH~m~~~ 191 (801)
T COG5617 114 GRTGFIALISALLWLTSPENL--KVLFIEGNIPRVLAIGFGPLALGLLERFLERGKKERSLLRMALLMSLVLLTHPMGGA 191 (801)
T ss_pred ccccchHHHHHHHHHhChhhe--EEEEecCcccHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445678999999999999864 455666432 22222222222 2 2332 3456778899999988777
Q ss_pred HHHH
Q 018572 216 NAGY 219 (354)
Q Consensus 216 ~~~~ 219 (354)
.++-
T Consensus 192 ~~g~ 195 (801)
T COG5617 192 LSGG 195 (801)
T ss_pred HHHH
Confidence 6664
No 44
>KOG2920 consensus Predicted methyltransferase [General function prediction only]
Probab=25.22 E-value=35 Score=33.33 Aligned_cols=40 Identities=18% Similarity=0.350 Sum_probs=34.1
Q ss_pred CcccCCCCchhHHHHhhc-ccccccccceeeccccCCchhh
Q 018572 281 PWCKAKVPLLYNFIQSHY-CFFQCQGSGFLEVLPIQTVAKL 320 (354)
Q Consensus 281 pWC~~~~P~iYs~VQ~~Y-~~~~~WnvGFl~Y~~~~qiPn~ 320 (354)
-=|+..+|.+|-++-..+ +-+||-|.-++|+||..|++--
T Consensus 123 LgCg~~Lp~i~~~~~~~~~~~fqD~na~vl~~~t~pn~~~~ 163 (282)
T KOG2920|consen 123 LGCGAALPGIFAFVKGAVSVHFQDFNAEVLRLVTLPNILVN 163 (282)
T ss_pred cCCcccccchhhhhhccceeeeEecchhheeeecccceecc
Confidence 479999999999976645 8899999999999999887643
Done!