Query 018572
Match_columns 354
No_of_seqs 182 out of 562
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 17:22:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018572.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018572hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qj2a2 g.14.1.1 (A:127-209) N 20.9 17 0.0012 25.6 1.4 18 268-285 48-65 (83)
2 d2hpqp_ g.14.1.1 (P:) Meizothr 18.6 22 0.0016 24.7 1.6 21 268-288 47-67 (79)
3 d5hpga_ g.14.1.1 (A:) Plasmino 16.3 24 0.0017 24.8 1.3 17 268-284 49-65 (84)
4 d1nl1a1 g.14.1.1 (A:66-147) Pr 14.8 28 0.002 24.3 1.3 21 268-288 47-67 (82)
5 d1ki0a1 g.14.1.1 (A:81-163) Pl 14.5 28 0.0021 24.3 1.3 19 268-286 50-68 (83)
6 d1pmla_ g.14.1.1 (A:) Plasmino 12.0 34 0.0024 24.0 1.0 17 267-284 51-67 (86)
7 d1i71a_ g.14.1.1 (A:) Apolipop 11.9 38 0.0027 23.6 1.3 18 268-286 48-65 (83)
8 d2i9aa2 g.14.1.1 (A:50-132) Ur 11.6 34 0.0025 23.8 0.9 17 267-284 49-65 (83)
9 d1a0ha1 g.14.1.1 (A:164-270) M 11.5 38 0.0028 24.9 1.3 19 268-286 53-71 (109)
10 d1ki0a2 g.14.1.1 (A:164-250) P 10.8 43 0.0031 23.6 1.3 20 268-288 49-68 (87)
No 1
>d2qj2a2 g.14.1.1 (A:127-209) NK1 fragment of hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.90 E-value=17 Score=25.62 Aligned_cols=18 Identities=33% Similarity=0.724 Sum_probs=12.3
Q ss_pred hhccCCCCCCCCCCcccC
Q 018572 268 FNMCLGRSPDEMRPWCKA 285 (354)
Q Consensus 268 ~~fC~~~~~~~~~pWC~~ 285 (354)
.+||...+.++.+|||--
T Consensus 48 hNyCRNP~~~~~~PWCy~ 65 (83)
T d2qj2a2 48 ENYCRNPRGEEGGPWCFT 65 (83)
T ss_dssp TTCCBCSSCCTTCSEEEB
T ss_pred cccccCCCCCCCCcceEe
Confidence 689976444445899963
No 2
>d2hpqp_ g.14.1.1 (P:) Meizothrombin {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.56 E-value=22 Score=24.69 Aligned_cols=21 Identities=29% Similarity=0.510 Sum_probs=13.1
Q ss_pred hhccCCCCCCCCCCcccCCCC
Q 018572 268 FNMCLGRSPDEMRPWCKAKVP 288 (354)
Q Consensus 268 ~~fC~~~~~~~~~pWC~~~~P 288 (354)
..||...+.+..+|||--.-|
T Consensus 47 ~NyCRNP~~~~~~PWCyt~~~ 67 (79)
T d2hpqp_ 47 ENFCRNPDGDEEGVWCYVAGK 67 (79)
T ss_dssp TTCCBCSSCCSSCCBCBCSSS
T ss_pred cccccCCCCCCCCcceEeCCC
Confidence 579975444445799964333
No 3
>d5hpga_ g.14.1.1 (A:) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.28 E-value=24 Score=24.77 Aligned_cols=17 Identities=35% Similarity=0.735 Sum_probs=11.5
Q ss_pred hhccCCCCCCCCCCccc
Q 018572 268 FNMCLGRSPDEMRPWCK 284 (354)
Q Consensus 268 ~~fC~~~~~~~~~pWC~ 284 (354)
.+||...+.+..+|||-
T Consensus 49 ~NyCRNP~~~~~~PWCy 65 (84)
T d5hpga_ 49 KNYCRNPDGDVGGPWCY 65 (84)
T ss_dssp TTCCBCTTCCTTCCEEE
T ss_pred cccccCCCCCcCCCCeE
Confidence 57897544344589996
No 4
>d1nl1a1 g.14.1.1 (A:66-147) Prothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=14.78 E-value=28 Score=24.31 Aligned_cols=21 Identities=29% Similarity=0.697 Sum_probs=13.1
Q ss_pred hhccCCCCCCCCCCcccCCCC
Q 018572 268 FNMCLGRSPDEMRPWCKAKVP 288 (354)
Q Consensus 268 ~~fC~~~~~~~~~pWC~~~~P 288 (354)
..||...+.+..+|||--+-|
T Consensus 47 ~NyCRNP~~~~~~PWCyv~~~ 67 (82)
T d1nl1a1 47 ENFCRNPDGSITGPWCYTTSP 67 (82)
T ss_dssp TTCCBCTTCCTTCSEEEBSST
T ss_pred cccccCCCCCCCCCCeEeCCC
Confidence 578975443435899964434
No 5
>d1ki0a1 g.14.1.1 (A:81-163) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.46 E-value=28 Score=24.27 Aligned_cols=19 Identities=32% Similarity=0.740 Sum_probs=12.2
Q ss_pred hhccCCCCCCCCCCcccCC
Q 018572 268 FNMCLGRSPDEMRPWCKAK 286 (354)
Q Consensus 268 ~~fC~~~~~~~~~pWC~~~ 286 (354)
.+||...+.+..+|||--+
T Consensus 50 hNyCRNP~~~~~~PWCy~~ 68 (83)
T d1ki0a1 50 ENYCRNPDNDPQGPWCYTT 68 (83)
T ss_dssp TTCCBCTTCCTTCCEEEBS
T ss_pred cccccCCCCCCCCCceEec
Confidence 6789754434457999643
No 6
>d1pmla_ g.14.1.1 (A:) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.04 E-value=34 Score=24.04 Aligned_cols=17 Identities=35% Similarity=0.974 Sum_probs=11.6
Q ss_pred hhhccCCCCCCCCCCccc
Q 018572 267 YFNMCLGRSPDEMRPWCK 284 (354)
Q Consensus 267 Y~~fC~~~~~~~~~pWC~ 284 (354)
-.+||...+.+ .+|||-
T Consensus 51 ~hNyCRNP~g~-~~PWCy 67 (86)
T d1pmla_ 51 KHNYCRNPDGD-AKPWCH 67 (86)
T ss_dssp SSCCCBCSSCC-SSCEEE
T ss_pred ccccccCCCCC-ccceEE
Confidence 46899765433 589994
No 7
>d1i71a_ g.14.1.1 (A:) Apolipoprotein A {Human (Homo sapiens), IV-7 variant [TaxId: 9606]}
Probab=11.86 E-value=38 Score=23.61 Aligned_cols=18 Identities=33% Similarity=0.931 Sum_probs=12.0
Q ss_pred hhccCCCCCCCCCCcccCC
Q 018572 268 FNMCLGRSPDEMRPWCKAK 286 (354)
Q Consensus 268 ~~fC~~~~~~~~~pWC~~~ 286 (354)
.+||...+.+ .+|||--+
T Consensus 48 hNyCRNP~~~-~~PWCyv~ 65 (83)
T d1i71a_ 48 RNYCRNPDAE-IRPWCYTM 65 (83)
T ss_dssp TTCCBCSSSC-SSCEEEBS
T ss_pred cccccCCCCC-CCceEEec
Confidence 6789764433 58999643
No 8
>d2i9aa2 g.14.1.1 (A:50-132) Urokinase-type plasminogen activator {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.61 E-value=34 Score=23.78 Aligned_cols=17 Identities=35% Similarity=0.856 Sum_probs=11.5
Q ss_pred hhhccCCCCCCCCCCccc
Q 018572 267 YFNMCLGRSPDEMRPWCK 284 (354)
Q Consensus 267 Y~~fC~~~~~~~~~pWC~ 284 (354)
-.+||...+.+ .+|||-
T Consensus 49 ~hNyCRNP~~~-~~PWCy 65 (83)
T d2i9aa2 49 KHNYCRNPDNR-RRPWCY 65 (83)
T ss_dssp SSCCCBCTTCB-SSCEEE
T ss_pred CcccccCCCCC-cCceeE
Confidence 35799764433 489995
No 9
>d1a0ha1 g.14.1.1 (A:164-270) Meizothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=11.53 E-value=38 Score=24.94 Aligned_cols=19 Identities=32% Similarity=0.669 Sum_probs=12.3
Q ss_pred hhccCCCCCCCCCCcccCC
Q 018572 268 FNMCLGRSPDEMRPWCKAK 286 (354)
Q Consensus 268 ~~fC~~~~~~~~~pWC~~~ 286 (354)
.+||...+.+..+|||--.
T Consensus 53 hNyCRNPdg~~~~PWCYv~ 71 (109)
T d1a0ha1 53 ENFCRNPDGDEEGAWCYVA 71 (109)
T ss_dssp TTSCBCTTCCTTCCEEECS
T ss_pred cccccCCCCCCCCceeEec
Confidence 6799754434457999643
No 10
>d1ki0a2 g.14.1.1 (A:164-250) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.79 E-value=43 Score=23.58 Aligned_cols=20 Identities=35% Similarity=0.904 Sum_probs=12.8
Q ss_pred hhccCCCCCCCCCCcccCCCC
Q 018572 268 FNMCLGRSPDEMRPWCKAKVP 288 (354)
Q Consensus 268 ~~fC~~~~~~~~~pWC~~~~P 288 (354)
.+||...+.+ .+|||--.-|
T Consensus 49 hNyCRNP~~~-~~PWCy~~~~ 68 (87)
T d1ki0a2 49 KNYCRNPDRE-LRPWCFTTDP 68 (87)
T ss_dssp TTCCBCSSSC-SSCEEEBSCT
T ss_pred cccccCCCCC-cccceEeccC
Confidence 6789764433 5899964333
Done!