Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>018573
MAESVREEPAAISANSTRSKLRYPLRSATKSKEEKPPVVDPSNSSASRRGRSTSTVSKSV
SVLDLSAKEKSAKPPRRLSIPAKSTVNSAPKSVGNITPISETRAKRLSIPQRKSETPRYD
ISLSSSRKKFNVLSSASYWLNQIKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYA
RRHNLSELGETVIDLFERYNISETLEQLQVSETCSQVPQEGTRSSDDEVHSSSSTVGIRK
LKPKSLNTDSAQVSPVAESVKKEISSKNSPAPPRTRASLNKNSANSRSVSDIGKPKIQKK
PQKPTKQETNKEKDRTKQGKKSAGMEGPVSPPASDKVEENKENMDSYTMEEICA

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018573
        (354 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2154114 - symbol:AT5G62550 "AT5G62550" species...   472  7.1e-45   1


>TAIR|locus:2154114 [details] [associations]
            symbol:AT5G62550 "AT5G62550" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB015469
            UniGene:At.29044 UniGene:At.332 EMBL:AK229459 IPI:IPI00516614
            RefSeq:NP_201061.1 STRING:Q9FJJ1 PaxDb:Q9FJJ1 PRIDE:Q9FJJ1
            EnsemblPlants:AT5G62550.1 GeneID:836375 KEGG:ath:AT5G62550
            TAIR:At5g62550 eggNOG:NOG321757 HOGENOM:HOG000152504
            InParanoid:Q9FJJ1 OMA:HAGCEPL PhylomeDB:Q9FJJ1
            ProtClustDB:CLSN2687346 Genevestigator:Q9FJJ1 Uniprot:Q9FJJ1
        Length = 487

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 136/372 (36%), Positives = 189/372 (50%)

Query:     1 MAESVREE-PAAISANSTRSKLRYPLRSATKSKEEKPPVVDPXXXXX---XXXXXXXXXX 56
             M +S+ +   +A S NS  SKLRYPLRSA +SKE KPPV D                   
Sbjct:     1 MEKSMEKSVSSAASGNSINSKLRYPLRSALRSKEGKPPVPDFSASSMPRRARVVSAVSQS 60

Query:    57 XXXXXXXXXXXXEKSAKPPRRLSIPAKSTVNSAPKSVGN-ITPISETRAKRLSIPQR--- 112
                         +++  PPRRLSIP K T NS+ KSV + +T +SE + KR  I  R   
Sbjct:    61 TTVLDLSGKKSVDRTKLPPRRLSIPNKPTSNSSVKSVSSSVTSLSEVKPKRSRIVPRSFN 120

Query:   113 KSETP-RYDISLSSSRKKFNVLSSASYWLNQIKYSESVAKHSISLGFFKLALEAGCEP-Q 170
             ++ TP   ++  S +RKK   LSS++YWL  IK +ESVAKHSISLGFFKLAL AGCEP  
Sbjct:   121 ETTTPVSSNLRSSVTRKKVEDLSSSTYWLTHIKLAESVAKHSISLGFFKLALHAGCEPLD 180

Query:   171 KMRDELKSYARRHNLSELGETVIDLFERYNISETLEQLQVSETCSQVPQEGTRXXXXXXX 230
             KM++ELK YARR+N+  L + + +L E YNISE   Q+QVSET S V +E          
Sbjct:   181 KMKEELKLYARRNNMDGLADAMKELSELYNISEESNQVQVSETSSVVAEETAMSLNNDND 240

Query:   231 --XXXXTVGIRKLKPKSLNTDSAQVSPVAESVKKEISSKNSPAPPRTRASLNKNSANSRS 288
                   T G   +  +    D+ Q S V ++ K++ + ++S     T+    K++    S
Sbjct:   241 VQSSFSTPGNSNITSEITKDDALQDSTVTKTTKEKDALQDSSVTETTK---EKDALQDSS 297

Query:   289 VSDIGXXXXXXXXXXXXXXETNKEKDR------TKQGKKSAGMEGPVSPPASDKVEE--- 339
             V++                ET KE+D       T+  K+   +E          +E    
Sbjct:   298 VTE--TSKEEGALQDSSVTETTKEEDALQDSSVTETTKEEQALETVTQGRTRKSLEVINV 355

Query:   340 NKENMDSYTMEE 351
             N+EN DS  ++E
Sbjct:   356 NQEN-DSEVVQE 366


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.304   0.121   0.322    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      354       302   0.00097  115 3  11 23  0.40    35
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  170 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.96u 0.12s 26.08t   Elapsed:  00:00:01
  Total cpu time:  25.96u 0.12s 26.08t   Elapsed:  00:00:01
  Start:  Mon May 20 19:58:15 2013   End:  Mon May 20 19:58:16 2013

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