Query 018573
Match_columns 354
No_of_seqs 20 out of 22
Neff 2.2
Searched_HMMs 29240
Date Mon Mar 25 17:23:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018573.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018573hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a1g_A Mitotic checkpoint seri 66.1 6.7 0.00023 33.5 4.6 49 135-183 100-149 (152)
2 2wvi_A Mitotic checkpoint seri 60.7 10 0.00035 32.7 4.8 49 135-183 95-144 (164)
3 3esl_A Checkpoint serine/threo 59.8 10 0.00036 33.9 4.8 50 135-184 114-164 (202)
4 4aez_C MAD3, mitotic spindle c 54.8 13 0.00046 33.6 4.7 48 135-182 149-197 (223)
5 2ygg_A Sodium/hydrogen exchang 42.2 19 0.00065 28.1 3.1 26 170-196 21-48 (70)
6 2k9i_A Plasmid PRN1, complete 33.2 52 0.0018 21.8 3.8 30 169-199 17-46 (55)
7 3li6_A Calcium-binding protein 29.8 44 0.0015 21.4 3.0 32 173-204 19-50 (66)
8 2hsb_A Hypothetical UPF0332 pr 29.4 81 0.0028 24.0 4.8 28 135-162 4-31 (126)
9 3f1i_S STAM-1, signal transduc 29.1 27 0.00091 27.6 2.0 42 161-202 30-74 (77)
10 2ctr_A DNAJ homolog subfamily 28.4 47 0.0016 24.6 3.2 52 142-206 12-63 (88)
11 2yua_A Williams-beuren syndrom 28.0 23 0.0008 26.9 1.6 54 142-207 22-75 (99)
12 3dfg_A Xcrecx, regulatory prot 27.5 44 0.0015 27.7 3.2 33 173-205 34-67 (162)
13 2ys8_A RAB-related GTP-binding 23.9 68 0.0023 24.1 3.4 52 142-206 32-83 (90)
14 1hdj_A Human HSP40, HDJ-1; mol 23.5 69 0.0023 22.9 3.3 52 143-207 9-60 (77)
15 2och_A Hypothetical protein DN 23.3 39 0.0013 24.1 1.9 51 142-207 13-63 (73)
16 1tiz_A Calmodulin-related prot 23.3 79 0.0027 20.0 3.2 31 173-203 20-50 (67)
17 2cug_A Mkiaa0962 protein; DNAJ 23.0 43 0.0015 24.8 2.2 53 142-207 22-74 (88)
18 2joj_A Centrin protein; N-term 22.1 87 0.003 20.6 3.4 31 173-203 26-56 (77)
19 3d5l_A Regulatory protein RECX 21.8 62 0.0021 28.1 3.2 36 170-205 75-111 (221)
20 2ctp_A DNAJ homolog subfamily 21.7 45 0.0015 24.0 1.9 53 142-207 12-64 (78)
21 2cpg_A REPA protein, transcrip 21.1 1.1E+02 0.0039 19.5 3.7 30 169-199 10-39 (45)
22 2dmx_A DNAJ homolog subfamily 20.8 76 0.0026 23.5 3.1 54 143-207 15-68 (92)
23 2dn9_A DNAJ homolog subfamily 20.7 71 0.0024 22.9 2.9 54 142-207 12-65 (79)
24 1iur_A KIAA0730 protein; DNAJ 20.5 64 0.0022 24.6 2.7 56 139-205 18-73 (88)
25 1avs_A Troponin C; muscle cont 20.5 93 0.0032 21.4 3.4 31 173-203 39-69 (90)
No 1
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=66.15 E-value=6.7 Score=33.54 Aligned_cols=49 Identities=10% Similarity=0.220 Sum_probs=42.8
Q ss_pred hhhhhhhhhhhhhhhccchhhhhHHHHHHhcCCCc-hhHHHHHHHHHHHh
Q 018573 135 SASYWLNQIKYSESVAKHSISLGFFKLALEAGCEP-QKMRDELKSYARRH 183 (354)
Q Consensus 135 s~sYWl~qIklaEsv~KHsvslgFFkLAle~~ceP-~~mr~ELk~Y~~Rh 183 (354)
.|.||..--.+-|..++..=+..-|+++++.+|+| ++|+.-.+.|..|-
T Consensus 100 ~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~rL~~~~~~F~~R~ 149 (152)
T 4a1g_A 100 SSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPREFLQQQYRLFQTRL 149 (152)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHh
Confidence 46777777778888888888888999999999999 99999999998873
No 2
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=60.72 E-value=10 Score=32.68 Aligned_cols=49 Identities=12% Similarity=0.316 Sum_probs=41.0
Q ss_pred hhhhhhhhhhhhhhhccchhhhhHHHHHHhcCCCc-hhHHHHHHHHHHHh
Q 018573 135 SASYWLNQIKYSESVAKHSISLGFFKLALEAGCEP-QKMRDELKSYARRH 183 (354)
Q Consensus 135 s~sYWl~qIklaEsv~KHsvslgFFkLAle~~ceP-~~mr~ELk~Y~~Rh 183 (354)
.|.||..--.+-|+.++..=+-.-|.++++++|+| ++|+.-.+.|..|.
T Consensus 95 ~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~~L~~~~~~F~~R~ 144 (164)
T 2wvi_A 95 LAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQFQARV 144 (164)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 46788877778888888888888999999999999 99988777776664
No 3
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=59.82 E-value=10 Score=33.93 Aligned_cols=50 Identities=18% Similarity=0.295 Sum_probs=42.5
Q ss_pred hhhhhhhhhhhhhhhccchhhhhHHHHHHhcCCCc-hhHHHHHHHHHHHhc
Q 018573 135 SASYWLNQIKYSESVAKHSISLGFFKLALEAGCEP-QKMRDELKSYARRHN 184 (354)
Q Consensus 135 s~sYWl~qIklaEsv~KHsvslgFFkLAle~~ceP-~~mr~ELk~Y~~Rh~ 184 (354)
.|.||..--.+-|..++.-=+..-|+++++.+|+| ++|+.-.+.|..|-.
T Consensus 114 ~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~~rL~~~~~~F~~R~~ 164 (202)
T 3esl_A 114 LSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPYNRLLRSLSNYEDRLR 164 (202)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHH
Confidence 46677777777788888888888999999999999 999999999988844
No 4
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=54.83 E-value=13 Score=33.63 Aligned_cols=48 Identities=13% Similarity=0.269 Sum_probs=40.3
Q ss_pred hhhhhhhhhhhhhhhccchhhhhHHHHHHhcCCCc-hhHHHHHHHHHHH
Q 018573 135 SASYWLNQIKYSESVAKHSISLGFFKLALEAGCEP-QKMRDELKSYARR 182 (354)
Q Consensus 135 s~sYWl~qIklaEsv~KHsvslgFFkLAle~~ceP-~~mr~ELk~Y~~R 182 (354)
.+.||..--.+-|..++.-=+..-|+++++.+|+| ++|+.-.+.|..|
T Consensus 149 ~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~rL~~~~~~F~~R 197 (223)
T 4aez_C 149 SSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPFLRFQQKYQQFTHR 197 (223)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH
Confidence 45667666667777777777888899999999999 9999999999888
No 5
>2ygg_A Sodium/hydrogen exchanger 1; metal binding protein-transport protein complex; HET: TAM; 2.23A {Homo sapiens}
Probab=42.24 E-value=19 Score=28.13 Aligned_cols=26 Identities=38% Similarity=0.606 Sum_probs=21.0
Q ss_pred hhHHHHHHHHHHHhcc--cchhhHHHHHH
Q 018573 170 QKMRDELKSYARRHNL--SELGETVIDLF 196 (354)
Q Consensus 170 ~~mr~ELk~Y~~Rh~l--~~l~e~vkel~ 196 (354)
+++|.-+.+| .||.| +-.++.|+|++
T Consensus 21 ykiRqr~~SY-nRHtL~~d~~e~q~~EiL 48 (70)
T 2ygg_A 21 QKTRQRLRSY-NRHTLVADPYEEAWNQML 48 (70)
T ss_dssp HHHHHHHHHH-HHSCCSCCHHHHHHHHHH
T ss_pred HHHHHhcccc-ccccCCCCchHHHHHHHH
Confidence 5667778899 99999 55788999965
No 6
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=33.17 E-value=52 Score=21.77 Aligned_cols=30 Identities=30% Similarity=0.468 Sum_probs=21.2
Q ss_pred chhHHHHHHHHHHHhcccchhhHHHHHHHHh
Q 018573 169 PQKMRDELKSYARRHNLSELGETVIDLFERY 199 (354)
Q Consensus 169 P~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y 199 (354)
|..+.++|..|+.++|+ ...+-|.+.++.|
T Consensus 17 ~~el~~~l~~~a~~~g~-s~s~~ir~ai~~~ 46 (55)
T 2k9i_A 17 PQEWHDRLMEIAKEKNL-TLSDVCRLAIKEY 46 (55)
T ss_dssp CHHHHHHHHHHHHHHTC-CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCC-CHHHHHHHHHHHH
Confidence 35677788888888887 5566666666666
No 7
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=29.80 E-value=44 Score=21.37 Aligned_cols=32 Identities=9% Similarity=0.227 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHHHhchhhh
Q 018573 173 RDELKSYARRHNLSELGETVIDLFERYNISET 204 (354)
Q Consensus 173 r~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~ 204 (354)
.+||+.++...+..--.+.+.+++..|+...+
T Consensus 19 ~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~ 50 (66)
T 3li6_A 19 YEEVKAFVSKKRAIKNEQLLQLIFKSIDADGN 50 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCS
T ss_pred HHHHHHHHHHccCCCcHHHHHHHHHHHCCCCC
Confidence 46788887777654455668888888876543
No 8
>2hsb_A Hypothetical UPF0332 protein AF0298; DUF103 family, structural genomics, joint center for structu genomics, JCSG; HET: MSE PG4; 1.95A {Archaeoglobus fulgidus}
Probab=29.45 E-value=81 Score=23.99 Aligned_cols=28 Identities=11% Similarity=0.209 Sum_probs=19.1
Q ss_pred hhhhhhhhhhhhhhhccchhhhhHHHHH
Q 018573 135 SASYWLNQIKYSESVAKHSISLGFFKLA 162 (354)
Q Consensus 135 s~sYWl~qIklaEsv~KHsvslgFFkLA 162 (354)
.+.+||.|-+--=..+++.+..|+|..|
T Consensus 4 ~~~~~l~~A~~~L~~A~~~~~~g~y~~a 31 (126)
T 2hsb_A 4 ELELRIRKAEKLVQDAKKEFEMGLYERC 31 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 4567888766666666777777776654
No 9
>3f1i_S STAM-1, signal transducing adapter molecule 1; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=29.11 E-value=27 Score=27.62 Aligned_cols=42 Identities=33% Similarity=0.541 Sum_probs=33.5
Q ss_pred HHHhcCCCc--hhHHHHHHHHHHHhc-ccchhhHHHHHHHHhchh
Q 018573 161 LALEAGCEP--QKMRDELKSYARRHN-LSELGETVIDLFERYNIS 202 (354)
Q Consensus 161 LAle~~ceP--~~mr~ELk~Y~~Rh~-l~~l~e~vkel~e~Y~I~ 202 (354)
+.||..|.- --|-.+|...=++|. |++|...+-|.++.|+-+
T Consensus 30 ~~LE~~c~~MgplId~kLE~iDrkh~~Lteln~~~leaL~lY~~l 74 (77)
T 3f1i_S 30 LHLEAMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKL 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777766 344589999999999 699999999999999743
No 10
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.40 E-value=47 Score=24.64 Aligned_cols=52 Identities=19% Similarity=0.326 Sum_probs=37.4
Q ss_pred hhhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhhh
Q 018573 142 QIKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETLE 206 (354)
Q Consensus 142 qIklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~E 206 (354)
-+-|...+...-|--.|.+||+.. -|++... .+..+.++.|.+.|.++.|-+
T Consensus 12 iLgv~~~as~~eIk~ayr~l~~~~--HPDk~~~-----------~~a~~~f~~i~~Ay~~L~d~~ 63 (88)
T 2ctr_A 12 ILGVPKSASERQIKKAFHKLAMKY--HPDKNKS-----------PDAEAKFREIAEAYETLSDAN 63 (88)
T ss_dssp HHTCCTTCCHHHHHHHHHHHHHHT--CTTTCCS-----------HHHHHHHHHHHHHHHHHHSSH
T ss_pred HcCcCCCCCHHHHHHHHHHHHHHH--CcCCCCC-----------hHHHHHHHHHHHHHHHHCCHH
Confidence 345566778888999999999987 7865321 234566788888898887744
No 11
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.02 E-value=23 Score=26.92 Aligned_cols=54 Identities=9% Similarity=0.213 Sum_probs=39.4
Q ss_pred hhhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhhhh
Q 018573 142 QIKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETLEQ 207 (354)
Q Consensus 142 qIklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~Eq 207 (354)
-+-|...+...-|-..|.+||+.. -|++... -.+..+.++.|.+.|.|+-|-++
T Consensus 22 vLgv~~~as~~eIk~ayr~l~~~~--HPDk~~~----------~~~a~~~f~~i~~Ay~~L~d~~~ 75 (99)
T 2yua_A 22 LLGVPSTATQAQIKAAYYRQCFLY--HPDRNSG----------SAEAAERFTRISQAYVVLGSATL 75 (99)
T ss_dssp HHTCCTTCCHHHHHHHHHHHHHHS--CTTTCSS----------CSHHHHHHHHHHHHHHHTTSHHH
T ss_pred HcCCCCCCCHHHHHHHHHHHHHHH--CcCCCCC----------CHHHHHHHHHHHHHHHHHCCHHH
Confidence 345667788889999999999987 7865321 12345668889999999887543
No 12
>3dfg_A Xcrecx, regulatory protein RECX; RECX RECA, homologous recombination, tandem repeats, three-helix bundle, cytoplasm; 1.50A {Xanthomonas campestris PV}
Probab=27.47 E-value=44 Score=27.69 Aligned_cols=33 Identities=9% Similarity=0.241 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcc-cchhhHHHHHHHHhchhhhh
Q 018573 173 RDELKSYARRHNL-SELGETVIDLFERYNISETL 205 (354)
Q Consensus 173 r~ELk~Y~~Rh~l-~~l~e~vkel~e~Y~I~e~~ 205 (354)
+.||+.+|.++|+ .+.-+.|.+-++.+|.++|.
T Consensus 34 ~~EL~~KL~~kg~~~e~Ie~vl~~l~~~g~ldD~ 67 (162)
T 3dfg_A 34 KKELNRKLQARGIEPEAAQAAVERLAGEGWQDDV 67 (162)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCHH
Confidence 5688888888887 55566677777777887774
No 13
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.88 E-value=68 Score=24.06 Aligned_cols=52 Identities=10% Similarity=0.073 Sum_probs=38.0
Q ss_pred hhhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhhh
Q 018573 142 QIKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETLE 206 (354)
Q Consensus 142 qIklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~E 206 (354)
-+-|...+...-|--+|.+||+.. -|++.. -.+..+.+++|.+-|.++-|-.
T Consensus 32 iLgv~~~as~~eIk~aYr~la~~~--HPDk~~-----------~~~~~~~f~~i~~Ay~~L~d~~ 83 (90)
T 2ys8_A 32 MLGVKPGASRDEVNKAYRKLAVLL--HPDKCV-----------APGSEDAFKAVVNARTALLKNI 83 (90)
T ss_dssp HHTCCTTCCHHHHHHHHHHHHHHH--CTTTCC-----------CTTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCcCCCCCHHHHHHHHHHHHHHH--CcCCCC-----------CccHHHHHHHHHHHHHHHCCcc
Confidence 345567777788888899999887 786432 1345566899999999987754
No 14
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=23.46 E-value=69 Score=22.92 Aligned_cols=52 Identities=15% Similarity=0.306 Sum_probs=36.5
Q ss_pred hhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhhhh
Q 018573 143 IKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETLEQ 207 (354)
Q Consensus 143 IklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~Eq 207 (354)
+-|...+...-|--.|.+||+.. -|++... .+..+.++.|.+.|.++.|-+.
T Consensus 9 Lgv~~~as~~~Ik~ayr~l~~~~--HPD~~~~-----------~~~~~~f~~i~~Ay~~L~d~~~ 60 (77)
T 1hdj_A 9 LGLARGASDEEIKRAYRRQALRY--HPDKNKE-----------PGAEEKFKEIAEAYDVLSDPRK 60 (77)
T ss_dssp HTCCTTCCHHHHHHHHHHHHHTT--CTTTCCC-----------TTHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHH--CcCCCCC-----------ccHHHHHHHHHHHHHHHCCHHH
Confidence 34556677778888999999876 7854321 2345668889999998877543
No 15
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=23.33 E-value=39 Score=24.08 Aligned_cols=51 Identities=16% Similarity=0.263 Sum_probs=36.6
Q ss_pred hhhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhhhh
Q 018573 142 QIKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETLEQ 207 (354)
Q Consensus 142 qIklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~Eq 207 (354)
-+-|...+...-|-.+|.+||+.. -|++... -.+.++.|.+.|.|+.|-++
T Consensus 13 iLgl~~~a~~~eIk~ayr~l~~~~--HPD~~~~-------------~~~~f~~i~~Ay~~L~d~~~ 63 (73)
T 2och_A 13 VLGVKPDASDNELKKAYRKMALKF--HPDKNPD-------------GAEQFKQISQAYEVLSDEKK 63 (73)
T ss_dssp HHTCCTTCCHHHHHHHHHHHHHHT--CTTTCTT-------------CHHHHHHHHHHHHHHTSHHH
T ss_pred HcCCCCCCCHHHHHHHHHHHHHHH--CcCCCcC-------------HHHHHHHHHHHHHHHCCHHH
Confidence 345566778888889999999876 7854321 13568888999998877543
No 16
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=23.30 E-value=79 Score=20.01 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHHHhchhh
Q 018573 173 RDELKSYARRHNLSELGETVIDLFERYNISE 203 (354)
Q Consensus 173 r~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e 203 (354)
.+||+..+...+..--.+.+.+++..|+...
T Consensus 20 ~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~ 50 (67)
T 1tiz_A 20 LDEFREVALAFSPYFTQEDIVKFFEEIDVDG 50 (67)
T ss_dssp HHHHHHHHHHTCTTSCHHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHCCCC
Confidence 4677777777776545566888888887543
No 17
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=23.00 E-value=43 Score=24.82 Aligned_cols=53 Identities=25% Similarity=0.340 Sum_probs=37.6
Q ss_pred hhhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhhhh
Q 018573 142 QIKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETLEQ 207 (354)
Q Consensus 142 qIklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~Eq 207 (354)
-+-|...+...-|--.|.+||+.. -|++... .+..+.++.|.+-|.++.|-++
T Consensus 22 iLgv~~~as~~eIk~ayr~l~~~~--HPDk~~~-----------~~~~~~f~~i~~Ay~~L~d~~~ 74 (88)
T 2cug_A 22 VLGVSRTASQADIKKAYKKLAREW--HPDKNKD-----------PGAEDRFIQISKAYEILSNEEK 74 (88)
T ss_dssp HHTCCTTCCHHHHHHHHHHHHHHS--CTTTCCS-----------TTHHHHHHHHHHHHHHHHSHHH
T ss_pred HcCcCCCCCHHHHHHHHHHHHHHH--CcCCCCC-----------hhHHHHHHHHHHHHHHHCCHHH
Confidence 344556777788889999999986 7864321 2345668888999998877543
No 18
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=22.11 E-value=87 Score=20.55 Aligned_cols=31 Identities=19% Similarity=0.296 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHHHhchhh
Q 018573 173 RDELKSYARRHNLSELGETVIDLFERYNISE 203 (354)
Q Consensus 173 r~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e 203 (354)
.+||+.++...|..--.+.+.+++..|+...
T Consensus 26 ~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~ 56 (77)
T 2joj_A 26 YHELKVAMRALGFDVKKPEILELMNEYDREG 56 (77)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHCCCC
Confidence 5677777777776445566788888777543
No 19
>3d5l_A Regulatory protein RECX; PSI-II, NYSGXRC, DNA repair, 10123K, structural genomi protein structure initiative; 2.35A {Lactobacillus reuteri}
Probab=21.83 E-value=62 Score=28.10 Aligned_cols=36 Identities=6% Similarity=0.160 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHhcc-cchhhHHHHHHHHhchhhhh
Q 018573 170 QKMRDELKSYARRHNL-SELGETVIDLFERYNISETL 205 (354)
Q Consensus 170 ~~mr~ELk~Y~~Rh~l-~~l~e~vkel~e~Y~I~e~~ 205 (354)
.+=+.||..+|.++|+ .+.-+.|.+-++.+|.++|.
T Consensus 75 ~~S~~EL~~KL~~kg~~~e~i~~vl~~L~~~g~ldD~ 111 (221)
T 3d5l_A 75 MRTESDIVKKLKEIDTPEEFVEPILKKLRGQQLIDDH 111 (221)
T ss_dssp CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHH
T ss_pred cccHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCCCHH
Confidence 4557899999999997 56677788888899998873
No 20
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.66 E-value=45 Score=23.98 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=37.4
Q ss_pred hhhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhhhh
Q 018573 142 QIKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETLEQ 207 (354)
Q Consensus 142 qIklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~Eq 207 (354)
-+-|...+...-|--.|.+||+.. -|++... .+..+.++.|.+.|.|+.|-+.
T Consensus 12 iLgv~~~as~~eIk~ayr~l~~~~--HPDk~~~-----------~~~~~~f~~i~~Ay~~L~d~~~ 64 (78)
T 2ctp_A 12 ILGVSRGASDEDLKKAYRRLALKF--HPDKNHA-----------PGATEAFKAIGTAYAVLSNPEK 64 (78)
T ss_dssp HHTCCTTCCHHHHHHHHHHHHTTS--CTTTCSS-----------HHHHHHHHHHHHHHHHHTSHHH
T ss_pred HcCCCCCCCHHHHHHHHHHHHHHH--CcCCCCC-----------ccHHHHHHHHHHHHHHHCCHHH
Confidence 344566677788889999999865 8865422 1234668889999999877543
No 21
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=21.06 E-value=1.1e+02 Score=19.46 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=20.4
Q ss_pred chhHHHHHHHHHHHhcccchhhHHHHHHHHh
Q 018573 169 PQKMRDELKSYARRHNLSELGETVIDLFERY 199 (354)
Q Consensus 169 P~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y 199 (354)
|+.+-++|..|+.++|. .-.+-+.+.++.|
T Consensus 10 ~~~l~~~Ld~~a~~~g~-srS~~ir~ai~~~ 39 (45)
T 2cpg_A 10 SESVLENLEKMAREMGL-SKSAMISVALENY 39 (45)
T ss_dssp EHHHHHHHHHHHHHHTC-CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCc-CHHHHHHHHHHHH
Confidence 46677888888888886 3445566666555
No 22
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.77 E-value=76 Score=23.50 Aligned_cols=54 Identities=24% Similarity=0.275 Sum_probs=38.1
Q ss_pred hhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhhhh
Q 018573 143 IKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETLEQ 207 (354)
Q Consensus 143 IklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~Eq 207 (354)
+-|...+...-|-..|.+||+.. -|++... ......+.++.|.+.|.|+.|-.+
T Consensus 15 Lgv~~~as~~eIk~ayr~l~~~~--HPDk~~~---------~~~~a~~~f~~i~~Ay~~L~d~~~ 68 (92)
T 2dmx_A 15 LGVQASASPEDIKKAYRKLALRW--HPDKNPD---------NKEEAEKKFKLVSEAYEVLSDSKK 68 (92)
T ss_dssp HTCCTTCCTTHHHHHHHHHHHHT--CTTTCSS---------CSHHHHHHHHHHHHHHHHHHSHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHH--CCCCCCc---------cHHHHHHHHHHHHHHHHHHCCHHH
Confidence 44566778888999999999886 7865321 112345567889999999888554
No 23
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.71 E-value=71 Score=22.87 Aligned_cols=54 Identities=17% Similarity=0.281 Sum_probs=38.0
Q ss_pred hhhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhhhh
Q 018573 142 QIKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETLEQ 207 (354)
Q Consensus 142 qIklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~Eq 207 (354)
-+-|...+...-|--.|.+|++.. -|++... -.+..+.++.|.+.|.|+.|-.+
T Consensus 12 iLgv~~~a~~~~Ik~ayr~l~~~~--HPD~~~~----------~~~a~~~f~~i~~Ay~~L~d~~~ 65 (79)
T 2dn9_A 12 ILGVPRNASQKEIKKAYYQLAKKY--HPDTNKD----------DPKAKEKFSQLAEAYEVLSDEVK 65 (79)
T ss_dssp HHTCCTTCCHHHHHHHHHHHHHHT--CTTTCSS----------CTTHHHHHHHHHHHHHHHHSHHH
T ss_pred HcCCCCCCCHHHHHHHHHHHHHHH--CcCCCCC----------CHHHHHHHHHHHHHHHHHCCHHH
Confidence 344566778888889999999876 7864321 12345668889999999887544
No 24
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=20.49 E-value=64 Score=24.64 Aligned_cols=56 Identities=14% Similarity=0.041 Sum_probs=40.1
Q ss_pred hhhhhhhhhhhccchhhhhHHHHHHhcCCCchhHHHHHHHHHHHhcccchhhHHHHHHHHhchhhhh
Q 018573 139 WLNQIKYSESVAKHSISLGFFKLALEAGCEPQKMRDELKSYARRHNLSELGETVIDLFERYNISETL 205 (354)
Q Consensus 139 Wl~qIklaEsv~KHsvslgFFkLAle~~ceP~~mr~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e~~ 205 (354)
|+.-+-|...+..--|--+|.+||+.. -||+-... -.+-.+.+++|.+-|.|+.+.
T Consensus 18 ~y~vLgv~~~as~~eIKkaYrkla~~~--HPDk~~~~---------~~~a~~~F~~I~~AYevL~~~ 73 (88)
T 1iur_A 18 VTSVVEQAWKLPESERKKIIRRLYLKW--HPDKNPEN---------HDIANEVFKHLQNEINRLEKQ 73 (88)
T ss_dssp HHHHHHHTTSSCSHHHHHHHHHHHHHT--CTTTSSSC---------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHH--CCCCCCCc---------hHHHHHHHHHHHHHHHHHHhh
Confidence 344456777888888999999999987 78642110 012356789999999999875
No 25
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=20.48 E-value=93 Score=21.40 Aligned_cols=31 Identities=16% Similarity=0.126 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhcccchhhHHHHHHHHhchhh
Q 018573 173 RDELKSYARRHNLSELGETVIDLFERYNISE 203 (354)
Q Consensus 173 r~ELk~Y~~Rh~l~~l~e~vkel~e~Y~I~e 203 (354)
.+||+.++...|..--.+.+.+|+..|+...
T Consensus 39 ~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~ 69 (90)
T 1avs_A 39 TKELGTVMRMLGQNPTKEELDAIIEEVDEDG 69 (90)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC
Confidence 5778888887776545566888888887554
Done!