Your job contains 1 sequence.
>018574
MAAATAMRRRGGGGGMDDDKMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQ
QRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKV
ILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVS
SMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQAILFFFLFLFCNVF
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018574
(354 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 1482 6.7e-152 1
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 1335 2.5e-136 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 1319 1.2e-134 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 1319 1.2e-134 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 1319 1.2e-134 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 1319 1.2e-134 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 1319 1.2e-134 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 1319 1.2e-134 1
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 1318 1.6e-134 1
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 1297 2.7e-132 1
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 1295 4.4e-132 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 1252 1.6e-127 1
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f... 1252 1.6e-127 1
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 1252 1.6e-127 1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 1234 1.3e-125 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 1142 7.1e-116 1
UNIPROTKB|F1NTS2 - symbol:EIF4A3 "Eukaryotic initiation f... 1135 3.9e-115 1
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 1133 6.4e-115 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 1127 2.8e-114 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 1124 5.8e-114 1
UNIPROTKB|E1BSE5 - symbol:EIF4A3 "Eukaryotic initiation f... 1123 7.3e-114 1
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 1104 7.6e-112 1
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 1088 3.8e-110 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 1087 4.8e-110 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 1078 4.3e-109 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 1077 5.5e-109 1
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 1076 7.0e-109 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 1076 7.0e-109 1
UNIPROTKB|E7EQG2 - symbol:EIF4A2 "Eukaryotic initiation f... 1076 7.0e-109 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 1076 7.0e-109 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 1076 7.0e-109 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 1076 7.0e-109 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 1076 7.0e-109 1
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 1076 7.0e-109 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 1074 1.1e-108 1
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 1073 1.5e-108 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 1073 1.5e-108 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 1073 1.5e-108 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 1073 1.5e-108 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 1073 1.5e-108 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 1073 1.5e-108 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 1073 1.5e-108 1
TAIR|locus:2088237 - symbol:EIF4A1 "eukaryotic translatio... 1071 2.4e-108 1
TAIR|locus:2020078 - symbol:EIF4A-2 "eif4a-2" species:370... 1060 3.5e-107 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 1054 1.5e-106 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 1054 1.5e-106 1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 1054 1.5e-106 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 1050 4.0e-106 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 1048 6.5e-106 1
GENEDB_PFALCIPARUM|PFD1070w - symbol:PFD1070w "eukaryotic... 1039 5.8e-105 1
UNIPROTKB|J3KT12 - symbol:EIF4A1 "Eukaryotic initiation f... 1039 5.8e-105 1
UNIPROTKB|Q8IFN9 - symbol:PFD1070w "Eukaryotic initiation... 1039 5.8e-105 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 1033 2.5e-104 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 985 3.1e-99 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 985 3.1e-99 1
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 981 8.2e-99 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 973 5.8e-98 1
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 973 5.8e-98 1
UNIPROTKB|J9NU36 - symbol:EIF4A1 "Uncharacterized protein... 963 6.6e-97 1
UNIPROTKB|J3QS69 - symbol:EIF4A1 "Eukaryotic initiation f... 907 5.7e-91 1
UNIPROTKB|J3KTB5 - symbol:EIF4A1 "Eukaryotic initiation f... 805 3.7e-80 1
UNIPROTKB|Q9NZE6 - symbol:EIF4A2 "BM-010" species:9606 "H... 796 3.3e-79 1
UNIPROTKB|F1LP27 - symbol:Eif4a2 "Eukaryotic initiation f... 793 6.8e-79 1
UNIPROTKB|J3KSZ0 - symbol:EIF4A1 "Eukaryotic initiation f... 749 3.1e-74 1
WB|WBGene00018997 - symbol:F57B9.3 species:6239 "Caenorha... 742 1.7e-73 1
CGD|CAL0006152 - symbol:DHH1 species:5476 "Candida albica... 613 8.1e-60 1
UNIPROTKB|Q5AAW3 - symbol:DHH1 "ATP-dependent RNA helicas... 613 8.1e-60 1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN... 602 1.2e-58 1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN... 602 1.2e-58 1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN... 602 1.2e-58 1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN... 602 1.2e-58 1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN... 602 1.2e-58 1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN... 602 1.2e-58 1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli... 602 1.2e-58 1
SGD|S000002319 - symbol:DHH1 "Cytoplasmic DExD/H-box heli... 594 8.4e-58 1
TAIR|locus:2127043 - symbol:RH8 "RNAhelicase-like 8" spec... 587 4.6e-57 1
UNIPROTKB|A4R715 - symbol:DHH1 "ATP-dependent RNA helicas... 580 2.5e-56 1
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN... 578 4.2e-56 1
CGD|CAL0000067 - symbol:DBP5 species:5476 "Candida albica... 576 6.8e-56 1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 572 1.8e-55 1
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 570 2.9e-55 1
UNIPROTKB|P96614 - symbol:cshA "DEAD-box ATP-dependent RN... 569 3.7e-55 1
POMBASE|SPBC12C2.06 - symbol:SPBC12C2.06 "cytoplasmic ATP... 569 3.7e-55 1
TAIR|locus:2050715 - symbol:AT2G45810 species:3702 "Arabi... 566 7.8e-55 1
DICTYBASE|DDB_G0291804 - symbol:ddx6 "DEAD/DEAH box helic... 564 1.3e-54 1
UNIPROTKB|F1S432 - symbol:DDX19B "Uncharacterized protein... 561 2.6e-54 1
UNIPROTKB|F1MUT6 - symbol:DDX19B "Uncharacterized protein... 560 3.4e-54 1
UNIPROTKB|E2RR50 - symbol:DDX19A "Uncharacterized protein... 558 5.5e-54 1
RGD|68381 - symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box heli... 558 5.5e-54 1
UNIPROTKB|E9PTL9 - symbol:Ddx19b "Protein Ddx19b" species... 558 5.5e-54 1
UNIPROTKB|F1PIZ6 - symbol:DDX25 "Uncharacterized protein"... 557 7.0e-54 1
UNIPROTKB|I3LC00 - symbol:DDX19A "Uncharacterized protein... 557 7.0e-54 1
RGD|1303136 - symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box p... 557 7.0e-54 1
RGD|1593382 - symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box po... 557 7.0e-54 1
MGI|MGI:1353582 - symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) bo... 555 1.1e-53 1
SGD|S000005572 - symbol:DBP5 "Cytoplasmic ATP-dependent R... 555 1.1e-53 1
UNIPROTKB|Q3ZBV2 - symbol:DDX19A "ATP-dependent RNA helic... 554 1.5e-53 1
UNIPROTKB|Q9NUU7 - symbol:DDX19A "ATP-dependent RNA helic... 554 1.5e-53 1
ZFIN|ZDB-GENE-080721-12 - symbol:zgc:193690 "zgc:193690" ... 554 1.5e-53 1
UNIPROTKB|Q2TBP1 - symbol:DDX25 "ATP-dependent RNA helica... 553 1.9e-53 1
WARNING: Descriptions of 777 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 1482 (526.7 bits), Expect = 6.7e-152, P = 6.7e-152
Identities = 284/321 (88%), Positives = 308/321 (95%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+VFETT+G+E ITSF+ MGIK+D+LRG+Y+YGFEKPSAIQQRAVMPI++GRDVIAQAQS
Sbjct: 22 KLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQS 81
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKTSMIAL+VCQ VDTSSREVQALILSPTRELATQTEK I AIG NIQAHAC+GG
Sbjct: 82 GTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGN 141
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
SVGEDIRKLEHGVHVVSGTPGRVCDMIKR++LRTRAIKLL+LDESDEMLSRGFKDQIYDV
Sbjct: 142 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDV 201
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPPDLQV L+SATLPHEILEMT+KFMT+PVKILVKRDELTLEGIKQFFVAVE+EEWK
Sbjct: 202 YRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWK 261
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNTKRKVD+L+EKMR +NFTVSSMHGDMPQKERDAIM EFR
Sbjct: 262 FDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFR 321
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG +RVLITTDVWARG+DVQQ
Sbjct: 322 SGDSRVLITTDVWARGIDVQQ 342
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
Identities = 250/318 (78%), Positives = 289/318 (90%)
Query: 23 FETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTG 82
FET+E VE I +F+AM +K++LLRGIY YGFEKPSAIQQR++ PI+KGRDVIAQAQSGTG
Sbjct: 16 FETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTG 75
Query: 83 KTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVG 142
KT+ ++++ Q++DT+ RE Q L LSPTRELA Q +KVILA+GD +N+Q H C+GG ++G
Sbjct: 76 KTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLG 135
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
EDIRKL++G H+VSGTPGRV DMIKR+ LRTRAIK+LVLDE+DEML++GFK+QIYDVYRY
Sbjct: 136 EDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRY 195
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LPP QVVLISATLPHEILEMT+KFMTDP++ILVKRDELTLEGIKQFFVAVEREEWKFDT
Sbjct: 196 LPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDT 255
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
LCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKERD IM EFR+G
Sbjct: 256 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQ 315
Query: 323 TRVLITTDVWARGLDVQQ 340
+RVLITTDVWARG+DVQQ
Sbjct: 316 SRVLITTDVWARGIDVQQ 333
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 249/321 (77%), Positives = 289/321 (90%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QS
Sbjct: 26 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 85
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +LA+GD++N+Q HAC+GG
Sbjct: 86 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGT 145
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK+QIYDV
Sbjct: 146 NVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDV 205
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPP QVVLISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEWK
Sbjct: 206 YRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWK 265
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EFR
Sbjct: 266 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 325
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG +RVLI+TDVWARGLDV Q
Sbjct: 326 SGASRVLISTDVWARGLDVPQ 346
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 249/321 (77%), Positives = 289/321 (90%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QS
Sbjct: 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +LA+GD++N+Q HAC+GG
Sbjct: 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGT 144
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK+QIYDV
Sbjct: 145 NVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDV 204
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPP QVVLISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEWK
Sbjct: 205 YRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWK 264
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EFR
Sbjct: 265 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 324
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG +RVLI+TDVWARGLDV Q
Sbjct: 325 SGASRVLISTDVWARGLDVPQ 345
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 249/321 (77%), Positives = 289/321 (90%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QS
Sbjct: 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +LA+GD++N+Q HAC+GG
Sbjct: 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGT 144
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK+QIYDV
Sbjct: 145 NVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDV 204
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPP QVVLISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEWK
Sbjct: 205 YRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWK 264
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EFR
Sbjct: 265 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 324
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG +RVLI+TDVWARGLDV Q
Sbjct: 325 SGASRVLISTDVWARGLDVPQ 345
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 249/321 (77%), Positives = 289/321 (90%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QS
Sbjct: 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +LA+GD++N+Q HAC+GG
Sbjct: 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGT 144
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK+QIYDV
Sbjct: 145 NVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDV 204
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPP QVVLISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEWK
Sbjct: 205 YRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWK 264
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EFR
Sbjct: 265 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 324
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG +RVLI+TDVWARGLDV Q
Sbjct: 325 SGASRVLISTDVWARGLDVPQ 345
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 249/321 (77%), Positives = 289/321 (90%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QS
Sbjct: 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +LA+GD++N+Q HAC+GG
Sbjct: 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGT 144
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK+QIYDV
Sbjct: 145 NVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDV 204
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPP QVVLISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEWK
Sbjct: 205 YRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWK 264
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EFR
Sbjct: 265 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 324
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG +RVLI+TDVWARGLDV Q
Sbjct: 325 SGASRVLISTDVWARGLDVPQ 345
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 1319 (469.4 bits), Expect = 1.2e-134, P = 1.2e-134
Identities = 249/321 (77%), Positives = 289/321 (90%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QS
Sbjct: 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +LA+GD++N+Q HAC+GG
Sbjct: 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGT 144
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK+QIYDV
Sbjct: 145 NVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDV 204
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPP QVVLISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEWK
Sbjct: 205 YRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWK 264
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EFR
Sbjct: 265 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 324
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG +RVLI+TDVWARGLDV Q
Sbjct: 325 SGASRVLISTDVWARGLDVPQ 345
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 249/321 (77%), Positives = 288/321 (89%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QS
Sbjct: 20 KIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 79
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ ++V Q +D RE QALIL+PTRELA Q +KV+LA+GD++N+Q HAC+GG
Sbjct: 80 GTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGT 139
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK+QIYDV
Sbjct: 140 NVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDV 199
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPP QV LISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEWK
Sbjct: 200 YRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWK 259
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EFR
Sbjct: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 319
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG +RVLI+TDVWARGLDV Q
Sbjct: 320 SGASRVLISTDVWARGLDVSQ 340
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 1297 (461.6 bits), Expect = 2.7e-132, P = 2.7e-132
Identities = 242/318 (76%), Positives = 287/318 (90%)
Query: 23 FETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTG 82
FE++E V I +FD MG+++DLLRGIY YGFEKPSAIQQRAV I+K RDVIAQAQSGTG
Sbjct: 16 FESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTG 75
Query: 83 KTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVG 142
KT+ +++V Q++DT RE QALILSPTRELA Q +KV+LA+GD++N+Q HAC+GG ++G
Sbjct: 76 KTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
EDIRKL++G HVVSGTPGRV DMI+R+ LRTRAIKLLVLDE+DEML++GFK+Q+YD+YRY
Sbjct: 136 EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LPP QVVL+SATLPHEILEMT+KFMTDP++ILVKRDELTLEGIKQFFVAV+REEWKFDT
Sbjct: 196 LPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDT 255
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
L DLYDTLTITQAV+FCNT+RKVDWLT+KM+ NFTVSSMHGDM QK+RD +M EFR+GT
Sbjct: 256 LIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGT 315
Query: 323 TRVLITTDVWARGLDVQQ 340
TRVLI+TDVWARGLDV Q
Sbjct: 316 TRVLISTDVWARGLDVPQ 333
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
Identities = 241/318 (75%), Positives = 287/318 (90%)
Query: 23 FETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTG 82
FE++E V I +FD MG+++DLLRGIY YGFEKPSAIQQRA+ I+K RDVIAQAQSGTG
Sbjct: 16 FESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTG 75
Query: 83 KTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVG 142
KT+ +++V Q++DT RE QALILSPTRELA Q +KV+LA+GD++N+Q HAC+GG ++G
Sbjct: 76 KTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
EDIRKL++G HVVSGTPGRV DMI+R+ LRTRAIKLLVLDE+DEML++GFK+Q+YD+YRY
Sbjct: 136 EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LPP QVVL+SATLPHEILEMT+KFMTDP++ILVKRDELTLEGIKQFFVAV+REEWKFDT
Sbjct: 196 LPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDT 255
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
L DLYDTLTITQAV+FCNT+RKVDWLT+KM+ NFTVSSMHGDM QK+RD +M EFR+GT
Sbjct: 256 LIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGT 315
Query: 323 TRVLITTDVWARGLDVQQ 340
TRVLI+TDVWARGLDV Q
Sbjct: 316 TRVLISTDVWARGLDVPQ 333
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 228/321 (71%), Positives = 282/321 (87%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
KM F T++ V +F+ M +K+ LLRGIY YG+E PSA+Q RA++ I KGRD IAQAQS
Sbjct: 12 KMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQS 71
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ +++ Q +DT RE QAL+LSPTRELATQ + VI+A+GD++N+Q HAC+GG
Sbjct: 72 GTGKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGT 131
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
++GEDIRKL++G HVVSGTPGRV DMI+R+ LRTR IK+LVLDE+DE+L+RGF++QIYDV
Sbjct: 132 NIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDV 191
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPP QVV++SATLP+++L+MTTKFMTDPV++LVKRDELTLEGIKQ+F+AVE+EEWK
Sbjct: 192 YRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWK 251
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNT+RKVDWLT+KMR NFTVSSMHG+MPQKERD+IM +FR
Sbjct: 252 FDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFR 311
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
G +RVLI+TDVWARG+DVQQ
Sbjct: 312 QGNSRVLISTDVWARGIDVQQ 332
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 234/321 (72%), Positives = 280/321 (87%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YG +P A QQR ++ ++K + + +QS
Sbjct: 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGRPEPGAFQQRKILVVMKSNNAVVISQS 84
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +LA+GD++N+Q HAC+GG
Sbjct: 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGT 144
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+VGEDIRKL++G HVV+GTPGRV DMI+R++LRTRAIK+LVLDE+DEML++GFK+QIYDV
Sbjct: 145 NVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDV 204
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
YRYLPP QVVLISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEWK
Sbjct: 205 YRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWK 264
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EFR
Sbjct: 265 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFR 324
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG +RVLI+TDVWARGLDV Q
Sbjct: 325 SGASRVLISTDVWARGLDVPQ 345
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
Identities = 239/319 (74%), Positives = 279/319 (87%)
Query: 21 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSG 80
+VFETT+G++ I SFD MG+ D +LRG+Y YG++KPS IQQRA++PI+KGRDVIAQAQSG
Sbjct: 10 LVFETTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSG 69
Query: 81 TGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKS 140
TGKTSMIA++VCQ V+ SSR+VQ L+LSP+RELA+QTEK I AIG NIQAHAC+GGKS
Sbjct: 70 TGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKS 129
Query: 141 VGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVY 200
+GEDI+KLE GVH VSGTPGRV DMIKR +L+T+A+KLLVLDESDEMLS+G KDQIYDVY
Sbjct: 130 IGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVY 189
Query: 201 RYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKF 260
R LP D+QV LISATLP EILEMT KFMTDPV+ILVK DELTLEGIKQ++V V++EEWKF
Sbjct: 190 RALPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKF 249
Query: 261 DTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRS 320
DTLCDLY LTI QA+IFCNT++KVDWLTEKMR NF VSSMHGD QKERD IM +FRS
Sbjct: 250 DTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRS 309
Query: 321 GTTRVLITTDVWARGLDVQ 339
+RVLI +DVWARG+DVQ
Sbjct: 310 FKSRVLIASDVWARGIDVQ 328
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 223/316 (70%), Positives = 278/316 (87%)
Query: 25 TTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKT 84
T+E V A++SF+ M +K+DLLRGIY YG+E PSA+Q RA++ I KGRDVIAQAQSGTGKT
Sbjct: 13 TSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKT 72
Query: 85 SMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGED 144
+ ++ + Q++D S R+ QALILSPTRELA Q + V+LA+GD +N+Q HAC+GG SVG D
Sbjct: 73 ATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGND 132
Query: 145 IRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLP 204
I+KL++G HVVSGTPGRV DMI+R+ LRTR +K+L+LDE+DE+L++GFK+QIYD+YRYLP
Sbjct: 133 IKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLP 192
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
P QVV++SATLP ++LEMT KF T+PV+ILVKRDELTLEG+KQ+F+AVE+EEWKFDTLC
Sbjct: 193 PGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLC 252
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
DLYDTLTITQAVIFCN++RKVDWLTEKMR NFTV+SMHG+MPQKERDAIM +FR G +R
Sbjct: 253 DLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSR 312
Query: 325 VLITTDVWARGLDVQQ 340
VLI TD+WARG+DVQQ
Sbjct: 313 VLICTDIWARGIDVQQ 328
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 205/317 (64%), Positives = 268/317 (84%)
Query: 24 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGK 83
++T+G++ +F++M +K DLL+GIY YGFE PSAIQ RA+M II GRD IAQAQSGTGK
Sbjct: 17 KSTKGIKVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGK 76
Query: 84 TSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGE 143
T+ ++ + + +DT S+E QALILSPTRELA Q + V+ +GD++NI HAC+GGK+VGE
Sbjct: 77 TATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGE 136
Query: 144 DIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
D++KL+ G +VSGTPGRV D+IKR+ L+TR IK+L+LDE+DE+ ++GFK+QIY++Y++L
Sbjct: 137 DVKKLQQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHL 196
Query: 204 PPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTL 263
PP +QVV++SATLP E+LEMT+KF TDPVKILVKRDE++L GIKQ++V ERE+WKFDTL
Sbjct: 197 PPSVQVVVVSATLPREVLEMTSKFTTDPVKILVKRDEISLSGIKQYYVQCEREDWKFDTL 256
Query: 264 CDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTT 323
CDLYD LTITQAVIFCNTK KV+WL ++M+ NFTV +MHGDM Q ERD+IM +FR G +
Sbjct: 257 CDLYDNLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNS 316
Query: 324 RVLITTDVWARGLDVQQ 340
RVLI+TDVWARG+DVQQ
Sbjct: 317 RVLISTDVWARGIDVQQ 333
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 1135 (404.6 bits), Expect = 3.9e-115, P = 3.9e-115
Identities = 225/322 (69%), Positives = 264/322 (81%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QS
Sbjct: 27 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 86
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINI-QAHACVGG 138
GTGKT+ +++V Q +D RE QALIL+PTRELA Q +KV + + + + H +G
Sbjct: 87 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKVGTSKSLPVKMKELHKAMGS 146
Query: 139 KSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYD 198
D+ +SG ++ MI+R++LRTRAIK+LVLDE+DEML++GFK+QIYD
Sbjct: 147 FKQEVDLPAGHEVARCISGIQLQLLYMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYD 206
Query: 199 VYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEW 258
VYRYLPP QVVLISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEW
Sbjct: 207 VYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEW 266
Query: 259 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEF 318
KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EF
Sbjct: 267 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF 326
Query: 319 RSGTTRVLITTDVWARGLDVQQ 340
RSG +RVLI+TDVWARGLDV Q
Sbjct: 327 RSGASRVLISTDVWARGLDVPQ 348
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
Identities = 210/319 (65%), Positives = 270/319 (84%)
Query: 22 VFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGT 81
V ET E I +FD M +K +LLRGIY YGFE+PSAIQQRA+MPI+ RDV+AQAQSGT
Sbjct: 9 VIETNYD-EVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGT 67
Query: 82 GKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSV 141
GKT+ +++V Q +DTS ++ QALIL+PTRELA Q +KV++A+GD +N++ HAC+GG V
Sbjct: 68 GKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLV 127
Query: 142 GEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 201
+D+ L+ GVHVV GTPGRV DMI+R+ L T A+++ VLDE+DEMLSRGFKDQIYD+++
Sbjct: 128 RDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQ 187
Query: 202 YLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFD 261
LPP QVVL+SAT+P ++LE+TTKFM DP++ILVK+DELTLEGIKQF+VAVE+EEWK D
Sbjct: 188 LLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLD 247
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
TLCDLY+T+T+TQAVIFCNT+RKVDWLTE++ +FTVSSMHGDM Q +RD +M EFR+G
Sbjct: 248 TLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTG 307
Query: 322 TTRVLITTDVWARGLDVQQ 340
++R+LITTD+ ARG+DVQQ
Sbjct: 308 SSRILITTDLLARGIDVQQ 326
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
Identities = 213/316 (67%), Positives = 265/316 (83%)
Query: 25 TTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKT 84
T+ VE +F++MG++++LLRGI+ YGFEKPSAIQQRA++PIIKGRD IAQAQSGTGKT
Sbjct: 24 TSSEVEVKPTFESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKT 83
Query: 85 SMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGED 144
+ ++ Q V+ + R Q LILSPTRELA Q +KV LA+ +F+NIQ HACVGGK++ +D
Sbjct: 84 ATFSIGALQCVEVNVRSPQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGGKNLSDD 143
Query: 145 IRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLP 204
++KLE GVH+VSGTPGRV DMI RK+L TR IK+++LDE+DEMLS GF+ QI DVYRYLP
Sbjct: 144 VKKLETGVHIVSGTPGRVLDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRYLP 203
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
Q+VL+SATL +++ MT KFMT PV+IL+KRDELTL+GIKQFFV+VE+E+WKF TLC
Sbjct: 204 NGTQIVLVSATLTQDVVSMTEKFMTKPVRILLKRDELTLDGIKQFFVSVEKEDWKFGTLC 263
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
D+YD+LTITQAVIFCNTK+KVD LTE+MR NFTV+SMHGDM QKER+ I+ FRSG R
Sbjct: 264 DIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENR 323
Query: 325 VLITTDVWARGLDVQQ 340
VLITTD+ ARG+DVQQ
Sbjct: 324 VLITTDILARGIDVQQ 339
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 208/311 (66%), Positives = 265/311 (85%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M +K +LLRGIY YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+ ++
Sbjct: 20 ETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSI 79
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
+V Q +DT+ ++ QALIL+PTRELA Q +KV++AIGDF+NI+ HAC+GG SV +D++ L+
Sbjct: 80 SVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQ 139
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
G VV GTPGRV DMI+R+ L+T +K+ VLDE+DEMLSRGF +QIYD+++ LP QV
Sbjct: 140 DGPQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQV 199
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
VL+SAT+P ++LE+TTKFM DPV+ILVK+DELTLEGIKQF++AVE+EEWK DTL DLY+T
Sbjct: 200 VLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYET 259
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
+TITQAVIFCNT+RKVDWLT+K+ +FTVS+MHGDM Q +RD IM EFRSG++RVLI T
Sbjct: 260 VTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIAT 319
Query: 330 DVWARGLDVQQ 340
D+ ARG+DVQQ
Sbjct: 320 DLLARGIDVQQ 330
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
Identities = 227/322 (70%), Positives = 262/322 (81%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QS
Sbjct: 26 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 85
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ +++V Q +D RE QALIL+PTRELA Q +K +LA G+ C
Sbjct: 86 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKSLLATGEVPVPPPVKCT--V 143
Query: 140 SVGEDIRKLEH-GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYD 198
S E R + ++ DMI+R++LRTRAIK+LVLDE+DEML++GFK+QIYD
Sbjct: 144 SSWEQCRLACFLSLFILQSE----IDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYD 199
Query: 199 VYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEW 258
VYRYLPP QVVLISATLPHEILEMT KFMTDP++ILVKRDELTLEGIKQFFVAVEREEW
Sbjct: 200 VYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEW 259
Query: 259 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEF 318
KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMR NFTVSSMHGDMPQKER++IM EF
Sbjct: 260 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF 319
Query: 319 RSGTTRVLITTDVWARGLDVQQ 340
RSG +RVLI+TDVWARGLDV Q
Sbjct: 320 RSGASRVLISTDVWARGLDVPQ 341
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 208/319 (65%), Positives = 268/319 (84%)
Query: 22 VFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGT 81
V E+T E +FD M ++++LLRGIY YGFEKPSAIQQRA++P ++GRDVIAQAQSGT
Sbjct: 20 VIESTWH-EVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGT 78
Query: 82 GKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSV 141
GKT+ ++ + Q +DTS RE QALIL+PTRELATQ ++V++A+G+++ + +HAC+GG +V
Sbjct: 79 GKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNV 138
Query: 142 GEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 201
ED R LE G HVV GTPGRV DMI RK LRT+ IKL VLDE+DEMLSRGFKDQI DV++
Sbjct: 139 REDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFK 198
Query: 202 YLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFD 261
LPPD+QV+L+SAT+P ++LE++ FM DPV ILVK++ELTLEGIKQF+V V++E WK
Sbjct: 199 MLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLG 258
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
TLCDLYDTL+ITQ+VIFCNT+RKVD LT++M +NFTVS+MHGDM Q++R+ IM +FRSG
Sbjct: 259 TLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSG 318
Query: 322 TTRVLITTDVWARGLDVQQ 340
++RVLITTD+ ARG+DVQQ
Sbjct: 319 SSRVLITTDLLARGIDVQQ 337
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 1088 (388.1 bits), Expect = 3.8e-110, P = 3.8e-110
Identities = 202/312 (64%), Positives = 258/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M +++ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q +D + QA++L+PTRELA Q +KV+LA+GD++ HAC+GG +V D++KL+
Sbjct: 89 SILQQIDVELKATQAMVLAPTRELAQQIQKVVLALGDYMGATCHACIGGTNVRNDVQKLQ 148
Query: 150 HGV-HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
V H+V GTPGRV DM+ R+ L + IK+ LDE+DEMLSRGFKDQIY++++ L D Q
Sbjct: 149 ADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLATDTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
V+L+SAT+P E+LE+TTKFM DPV+ILVK++ELTLEGI+QF++ VE+EEWK DTLCDLY+
Sbjct: 209 VILLSATMPQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYE 268
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLIT 328
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 329 TDLLARGIDVQQ 340
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 199/311 (63%), Positives = 259/311 (83%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E SFD+M +K +LLRG+Y YGFE+PSAIQQRA++PI+KG DVIAQAQSGTGKT+ ++
Sbjct: 22 EITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSI 81
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
+ Q +D + + QALI++PTRELA Q +KV++AIGDF+NIQ HAC+GG +V +D+ L
Sbjct: 82 SALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALR 141
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
G +V GTPGR+ DMI+R+ L+T +K+ +LDE+DEMLSRGF +QIYD+++ LP QV
Sbjct: 142 EGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQV 201
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
VL+SAT+P ++LE+TTKFM DPV+ILVK+ ELTLEGIKQF++AVE+EEWK DTL DLY+T
Sbjct: 202 VLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYET 261
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
+TITQAVIFCNT+RKVDWLT+K+ +FTVS+MHGDM Q +RD IM EFRSG++RVLI T
Sbjct: 262 VTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIAT 321
Query: 330 DVWARGLDVQQ 340
D+ ARG+DVQQ
Sbjct: 322 DLLARGIDVQQ 332
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 203/312 (65%), Positives = 259/312 (83%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 34 EITDNFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 93
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 94 SILQQLEIEQKETQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRNEMQKLQ 153
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L ++Q
Sbjct: 154 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQ 213
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+TTKFM +PV+ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 214 VVLLSATMPADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 273
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 274 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLIT 333
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 334 TDLLARGIDVQQ 345
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
Identities = 201/312 (64%), Positives = 259/312 (83%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M +++ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 52 EIVDSFDDMNLRETLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 111
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q +D + QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 112 SILQQIDIELKGTQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEVQKLQ 171
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ RK L ++ IK+ VLDE+DEMLSRGFKDQIY++++ L +Q
Sbjct: 172 AEAPHIVVGTPGRVYDMLNRKFLSSKYIKMFVLDEADEMLSRGFKDQIYEIFQKLSTSIQ 231
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P E+L++TTKFM +PV+ILVK++ELTLEGI+QF++ VE+EEWK DTLCDLY+
Sbjct: 232 VVLLSATMPAEVLDVTTKFMREPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYE 291
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QK+RD IM EFRSG++RVLIT
Sbjct: 292 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVLIT 351
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 352 TDLLARGIDVQQ 363
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 202/312 (64%), Positives = 258/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 329
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 330 TDLLARGIDVQQ 341
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 202/312 (64%), Positives = 258/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 329
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 330 TDLLARGIDVQQ 341
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 202/312 (64%), Positives = 258/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 329
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 330 TDLLARGIDVQQ 341
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 202/312 (64%), Positives = 258/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 329
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 330 TDLLARGIDVQQ 341
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 202/312 (64%), Positives = 258/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 329
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 330 TDLLARGIDVQQ 341
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 202/312 (64%), Positives = 258/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 329
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 330 TDLLARGIDVQQ 341
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 202/312 (64%), Positives = 258/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 209
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 210 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 329
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 330 TDLLARGIDVQQ 341
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 202/312 (64%), Positives = 258/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 31 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 90
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 91 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 150
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +Q
Sbjct: 151 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQ 210
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 211 VVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 270
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 271 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 330
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 331 TDLLARGIDVQQ 342
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
Identities = 201/312 (64%), Positives = 259/312 (83%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ +E QAL+L+PTRELA Q +KVILA+GD++ HAC+GG +V +++KL+
Sbjct: 90 SILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L ++Q
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQ 209
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM +P++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+
Sbjct: 210 VVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYE 269
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLIT
Sbjct: 270 TLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLIT 329
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 330 TDLLARGIDVQQ 341
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 199/312 (63%), Positives = 256/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 209 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKERD IM EFRSG++RVLIT
Sbjct: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 329 TDLLARGIDVQQ 340
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 199/312 (63%), Positives = 256/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 209 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKERD IM EFRSG++RVLIT
Sbjct: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 329 TDLLARGIDVQQ 340
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 199/312 (63%), Positives = 256/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 209 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKERD IM EFRSG++RVLIT
Sbjct: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 329 TDLLARGIDVQQ 340
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 199/312 (63%), Positives = 256/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 209 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKERD IM EFRSG++RVLIT
Sbjct: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 329 TDLLARGIDVQQ 340
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 199/312 (63%), Positives = 256/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 209 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKERD IM EFRSG++RVLIT
Sbjct: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 329 TDLLARGIDVQQ 340
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 199/312 (63%), Positives = 256/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 209 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKERD IM EFRSG++RVLIT
Sbjct: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 329 TDLLARGIDVQQ 340
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 199/312 (63%), Positives = 256/312 (82%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 209 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKERD IM EFRSG++RVLIT
Sbjct: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 329 TDLLARGIDVQQ 340
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 207/307 (67%), Positives = 252/307 (82%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+ V Q
Sbjct: 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVH 153
+D S + QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVH
Sbjct: 100 QLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 159
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV GTPGRV DM+KR++LR IK+ VLDE+DEMLSRGFKDQIYD+++ LPP +QV + S
Sbjct: 160 VVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT+P E LE+T KFM+ PV+ILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL IT
Sbjct: 220 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 279
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q RD IM EFRSG++RVLITTD+ A
Sbjct: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
Query: 334 RGLDVQQ 340
RG+DVQQ
Sbjct: 340 RGIDVQQ 346
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 205/311 (65%), Positives = 252/311 (81%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E SFDAMG++++LLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+
Sbjct: 36 EVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
V Q +D + + QAL+L+PTRELA Q EKV+ A+GD+ ++ HACVGG SV ED R L+
Sbjct: 96 GVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQ 155
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
GVHVV GTPGRV DM++R++LR IK+ VLDE+DEMLSRGFKDQIYD+++ LPP +QV
Sbjct: 156 AGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
+ SAT+P E LE+T KFM+ PV+ILVKRDELTLEGIKQF+V VE+E+WK +TLCDLY+T
Sbjct: 216 GVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYET 275
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
L ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q RD IM EFRSG++RVLITT
Sbjct: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Query: 330 DVWARGLDVQQ 340
D+ ARG+DVQQ
Sbjct: 336 DLLARGIDVQQ 346
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 199/311 (63%), Positives = 250/311 (80%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FDA+G+ + LLRGIY YGFEKPSAIQQR + PI+ G D I QAQSGTGKT+ +
Sbjct: 20 EIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATFVI 79
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
+ Q ++ QALIL+PTRELA Q +KV+LA+GD++ ++ HACVGG V EDI KL+
Sbjct: 80 SSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKLK 139
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
GVH+V GTPGRV DMI ++ L +KL +LDE+DEMLSRGFK QIY+V++ L PD+QV
Sbjct: 140 QGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQV 199
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
L SAT+P EILE+TT+FM DP ILVK+DELTLEGI+QF+VAVE+EEWK DTLCDLY+T
Sbjct: 200 ALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYET 259
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
LTITQ++I+CNT++KVD LT++M FTVS MHGDM QK+RD IM EFRSG+TRVL+TT
Sbjct: 260 LTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTT 319
Query: 330 DVWARGLDVQQ 340
D+ ARG+DVQQ
Sbjct: 320 DLLARGIDVQQ 330
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 199/311 (63%), Positives = 250/311 (80%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + +FDA+G+ + LLRGIY YGFEKPSAIQQR + PI+ G D I QAQSGTGKT+ +
Sbjct: 20 EIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATFVI 79
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
+ Q ++ QALIL+PTRELA Q +KV+LA+GD++ ++ HACVGG V EDI KL+
Sbjct: 80 SSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKLK 139
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
GVH+V GTPGRV DMI ++ L +KL +LDE+DEMLSRGFK QIY+V++ L PD+QV
Sbjct: 140 QGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQV 199
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
L SAT+P EILE+TT+FM DP ILVK+DELTLEGI+QF+VAVE+EEWK DTLCDLY+T
Sbjct: 200 ALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYET 259
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
LTITQ++I+CNT++KVD LT++M FTVS MHGDM QK+RD IM EFRSG+TRVL+TT
Sbjct: 260 LTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTT 319
Query: 330 DVWARGLDVQQ 340
D+ ARG+DVQQ
Sbjct: 320 DLLARGIDVQQ 330
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 205/311 (65%), Positives = 250/311 (80%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E SFDAM ++ DLLRGIY YGFEKPSAIQQR ++P KG DVI QAQSGTGKT+
Sbjct: 38 EVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCS 97
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
V Q +D S + QAL+L+PTRELA Q EKV+ A+GD++ ++A ACVGG SV ED R L+
Sbjct: 98 GVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQ 157
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
GVHVV GTPGRV D+++R++LR AIK+ VLDE+DEMLSRGFKDQIYD+++ LP +QV
Sbjct: 158 SGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQV 217
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
+ SAT+P E LE+T KFM PV+ILVKRDELTLEGIKQF+V V++EEWK +TLCDLY+T
Sbjct: 218 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYET 277
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
L ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q RD IM EFRSG++RVLITT
Sbjct: 278 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 337
Query: 330 DVWARGLDVQQ 340
D+ ARG+DVQQ
Sbjct: 338 DLLARGIDVQQ 348
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 194/311 (62%), Positives = 254/311 (81%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
+ + SFD M +K++LLRGIY +GFEKPSAIQ+RA++P G+DVIAQAQSGTGKT+ ++
Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV 85
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q +D VQAL+++PTRELA Q +KV+ A+G+++N+ C+GG SV +D RKLE
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLE 145
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
G+HVV GTPGRV DMI R L T IK+ VLDE+DEMLSRGFKDQIY+V+R +P D+QV
Sbjct: 146 AGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQV 205
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
VL+SAT+P E+L++T +FM +P++ILVK+DELTLEGI+QF++ V+++EWKFD LCDLY+
Sbjct: 206 VLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNV 265
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
+ +TQAVIFCNT+RKVD LTEKM FTVS +HGDM Q ERD IM EFRSG++RVLITT
Sbjct: 266 VNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITT 325
Query: 330 DVWARGLDVQQ 340
D+ ARG+DVQQ
Sbjct: 326 DILARGIDVQQ 336
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 194/324 (59%), Positives = 264/324 (81%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K+ F+T++ ++ ++F++M +KDDLLRGIY YGFE PS+IQ RA+ II G+DVIAQAQS
Sbjct: 10 KLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQS 69
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ + + Q +D +++QALILSPTRELA+Q +V+ +GD++N+ A A GGK
Sbjct: 70 GTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGK 129
Query: 140 SVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR--GFKDQI 196
++ +D++K++ HG VSGTPGRV DMIK++ L+TR +++LVLDE+DE+LS GFK QI
Sbjct: 130 TLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQI 189
Query: 197 YDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE 256
YD++ LP + QVV++SAT+ +ILE+T KFM DPVKILVKRDE++LEGIKQ+ V V++E
Sbjct: 190 YDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKE 249
Query: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMG 316
EWKFDTLCD+YD+LTITQ VIFCNTK+KVDWL++++ NF V SMHGDM Q+ERD +M
Sbjct: 250 EWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMN 309
Query: 317 EFRSGTTRVLITTDVWARGLDVQQ 340
+FR+G +RVLI+TDVWARG+DVQQ
Sbjct: 310 DFRTGHSRVLISTDVWARGIDVQQ 333
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 192/318 (60%), Positives = 251/318 (78%)
Query: 23 FETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTG 82
++T+E E TSF+ +GI + LLRGIY YGFEKPSAIQQR + PI+ GRDVI Q+QSGTG
Sbjct: 7 YKTSEKYEICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTG 66
Query: 83 KTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVG 142
KT + A+ V+ + E Q +ILSPTRELA QT+KV LA+ D+I++ + C+GGK +
Sbjct: 67 KTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMS 126
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
+DI+ L +GVHV+SGTPGR+ M+ + L+ + IK LV+DE+DEML++GFK+Q+YD+YR+
Sbjct: 127 DDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRF 186
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
L P+ Q++L SATLP E+LE+T KFM PVKILVKRDELTLEGIKQFFV++E+E+WK++T
Sbjct: 187 LSPNTQIILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYET 246
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
L DLY++LTITQAV+FCNT+ KVDWLT+KM NFTV MH M Q ERD IM +FR
Sbjct: 247 LADLYESLTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCK 306
Query: 323 TRVLITTDVWARGLDVQQ 340
RVLI+TD+W RGLDVQ+
Sbjct: 307 FRVLISTDIWGRGLDVQE 324
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 193/306 (63%), Positives = 249/306 (81%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 209 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKERD IM EFRSG++RVLIT
Sbjct: 269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Query: 329 TDVWAR 334
TD+ R
Sbjct: 329 TDLLNR 334
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 192/318 (60%), Positives = 251/318 (78%)
Query: 23 FETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTG 82
++T+E E TSF+ +GI + LLRGIY YGFEKPSAIQQR + PI+ GRDVI Q+QSGTG
Sbjct: 7 YKTSEKYEICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTG 66
Query: 83 KTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVG 142
KT + A+ V+ + E Q +ILSPTRELA QT+KV LA+ D+I++ + C+GGK +
Sbjct: 67 KTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMS 126
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
+DI+ L +GVHV+SGTPGR+ M+ + L+ + IK LV+DE+DEML++GFK+Q+YD+YR+
Sbjct: 127 DDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRF 186
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
L P+ Q++L SATLP E+LE+T KFM PVKILVKRDELTLEGIKQFFV++E+E+WK++T
Sbjct: 187 LSPNTQIILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYET 246
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
L DLY++LTITQAV+FCNT+ KVDWLT+KM NFTV MH M Q ERD IM +FR
Sbjct: 247 LADLYESLTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCK 306
Query: 323 TRVLITTDVWARGLDVQQ 340
RVLI+TD+W RGLDVQ+
Sbjct: 307 FRVLISTDIWGRGLDVQE 324
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
Identities = 195/312 (62%), Positives = 250/312 (80%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++I LTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 209 VVLLSATMPSDVLEVTKKFMRDPIRIX-----LTLEGIRQFYINVEREEWKLDTLCDLYE 263
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
TLTITQAVIF NT+RKVDWLTEKM +FTVS+MHGDM QKERD IM EFRSG++RVLIT
Sbjct: 264 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLIT 323
Query: 329 TDVWARGLDVQQ 340
TD+ ARG+DVQQ
Sbjct: 324 TDLLARGIDVQQ 335
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 178/309 (57%), Positives = 248/309 (80%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+ FD + +K +++RGI+ YG+E PSAIQQRA++PI +GRDV+AQAQSGTGKT+ ++
Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISA 81
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
Q ++ + + QALIL+PTRELA Q + VI AIG ++ + HA +GG S+ +DI G
Sbjct: 82 LQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSG 141
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
V +V GTPGRV DMI+R+ +T +K+ +LDE+DEMLS GFK+QIY+++R LP Q+VL
Sbjct: 142 VQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQIVL 201
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
+SAT+P ++LE+TTKFM +PV+ILVK+DELTLEGIKQF++ VE E++KFD LCDLYD+++
Sbjct: 202 LSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSIS 261
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
+TQAVIFCNT+ KV++LT K+R +FTVS++H D+PQ ERD IM EFRSG++R+LI+TD+
Sbjct: 262 VTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDL 321
Query: 332 WARGLDVQQ 340
ARG+DVQQ
Sbjct: 322 LARGIDVQQ 330
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 178/309 (57%), Positives = 248/309 (80%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+ FD + +K +++RGI+ YG+E PSAIQQRA++PI +GRDV+AQAQSGTGKT+ ++
Sbjct: 22 VYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISA 81
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
Q ++ + + QALIL+PTRELA Q + VI AIG ++ + HA +GG S+ +DI G
Sbjct: 82 LQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSG 141
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
V +V GTPGRV DMI+R+ +T +K+ +LDE+DEMLS GFK+QIY+++R LP Q+VL
Sbjct: 142 VQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQIVL 201
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
+SAT+P ++LE+TTKFM +PV+ILVK+DELTLEGIKQF++ VE E++KFD LCDLYD+++
Sbjct: 202 LSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSIS 261
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
+TQAVIFCNT+ KV++LT K+R +FTVS++H D+PQ ERD IM EFRSG++R+LI+TD+
Sbjct: 262 VTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDL 321
Query: 332 WARGLDVQQ 340
ARG+DVQQ
Sbjct: 322 LARGIDVQQ 330
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
Identities = 191/321 (59%), Positives = 249/321 (77%)
Query: 20 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQS 79
K FE+T + + SFD M + DLLRGIY YGFEKPSAIQQRA++P+ KG D+IAQAQS
Sbjct: 12 KNEFESTYD-KIVDSFDNMELPKDLLRGIYSYGFEKPSAIQQRAIIPLSKGFDIIAQAQS 70
Query: 80 GTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGK 139
GTGKT+ + + +D S + QALI++PTRELA Q +KV+LA+G++++I+++AC+GG
Sbjct: 71 GTGKTATFTVGILSRIDISVLKCQALIIAPTRELAQQIQKVVLALGEYLHIKSYACIGGT 130
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+ +DI+ L+ GVHVV GTPGRV +M+ R + I++ LDE+DEMLSRGFKDQIY++
Sbjct: 131 KITDDIQALQSGVHVVVGTPGRVFEMLSRGIINRDTIRIFCLDEADEMLSRGFKDQIYEI 190
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
+R+LP +QV L SAT+ E L +T+KFM +PV ILVK+DELTLEGI+QF+V V E+ K
Sbjct: 191 FRFLPKTIQVGLFSATMTDETLGITSKFMQNPVSILVKKDELTLEGIRQFYVNVGVEQGK 250
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
F+ L DLY+TL+ITQ+VIFCNT+RKVDWLT KM FTVSS HGD QK+RD I+ FR
Sbjct: 251 FEVLTDLYETLSITQSVIFCNTRRKVDWLTSKMTEQKFTVSSTHGD--QKDRDGILQAFR 308
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
SG TRVLITTD+ ARG+DVQQ
Sbjct: 309 SGATRVLITTDLLARGIDVQQ 329
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 183/311 (58%), Positives = 248/311 (79%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
+ + FD M + ++LLRG++ YGFE+PSAIQQRA+MPII+G DV+AQAQSGTGKT ++
Sbjct: 19 KVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSI 78
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
Q +DTS + QAL+L+PTRELA Q +KV++A+ ++I+ HAC+GG S ED L
Sbjct: 79 AALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLR 138
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
+V GTPGRV D I+R+ RT IK+ +LDE+DEMLS GFK+QIY ++ LPP QV
Sbjct: 139 DA-QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQV 197
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
VL+SAT+P+++LE+TTKFM +PV+ILVK+DELTLEGIKQF+V VE EE+K++ L DLYD+
Sbjct: 198 VLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDS 257
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
+++TQAVIFCNT+RKV+ LT K+R FTVS+++ D+PQ+ERD IM EFRSG++R+LI+T
Sbjct: 258 ISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILIST 317
Query: 330 DVWARGLDVQQ 340
D+ ARG+DVQQ
Sbjct: 318 DLLARGIDVQQ 328
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 183/311 (58%), Positives = 248/311 (79%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
+ + FD M + ++LLRG++ YGFE+PSAIQQRA+MPII+G DV+AQAQSGTGKT ++
Sbjct: 19 KVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSI 78
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
Q +DTS + QAL+L+PTRELA Q +KV++A+ ++I+ HAC+GG S ED L
Sbjct: 79 AALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLR 138
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
+V GTPGRV D I+R+ RT IK+ +LDE+DEMLS GFK+QIY ++ LPP QV
Sbjct: 139 DA-QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQV 197
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
VL+SAT+P+++LE+TTKFM +PV+ILVK+DELTLEGIKQF+V VE EE+K++ L DLYD+
Sbjct: 198 VLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDS 257
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
+++TQAVIFCNT+RKV+ LT K+R FTVS+++ D+PQ+ERD IM EFRSG++R+LI+T
Sbjct: 258 ISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILIST 317
Query: 330 DVWARGLDVQQ 340
D+ ARG+DVQQ
Sbjct: 318 DLLARGIDVQQ 328
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 178/282 (63%), Positives = 233/282 (82%)
Query: 60 QQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEK 119
+QRA++P IKG DVIAQAQSGTGKT+ A+++ Q ++ + QAL+L+PTRELA Q +K
Sbjct: 76 RQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQK 135
Query: 120 VILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKL 178
V++A+GD++ HAC+GG +V +++KL+ H++ GTPGRV DM+ R+ L + IK+
Sbjct: 136 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 195
Query: 179 LVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKR 238
VLDE+DEMLSRGFKDQIYD+++ L + QVVL+SAT+P ++LE+T KFM DP++ILVK+
Sbjct: 196 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 255
Query: 239 DELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFT 298
+ELTLEGI+QF++ VEREEWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM +FT
Sbjct: 256 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 315
Query: 299 VSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ 340
VS+MHGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQ
Sbjct: 316 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQ 357
>UNIPROTKB|J3QS69 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578495
Uniprot:J3QS69
Length = 300
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 169/274 (61%), Positives = 221/274 (80%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQ--KVVMALGDYMGASCHACIGGTNVRAEVQKLQ 146
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 147 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 206
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 207 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 266
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSM 302
TLTITQAVIF NT+RKVDWLTEKM +FTVS+M
Sbjct: 267 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSAM 300
>UNIPROTKB|J3KTB5 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584860
Uniprot:J3KTB5
Length = 257
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 147/245 (60%), Positives = 197/245 (80%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 13 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 72
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 73 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 132
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 133 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 192
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGI+QF++ VEREEWK DTLCDLY+
Sbjct: 193 VVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 252
Query: 269 TLTIT 273
TLTIT
Sbjct: 253 TLTIT 257
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 155/253 (61%), Positives = 202/253 (79%)
Query: 89 LTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKL 148
LTV +++ SRE +L P ++ +KVILA+GD++ HAC+GG +V +++KL
Sbjct: 2 LTVLRSLPLFSRE----LLFPVLKI----QKVILALGDYMGATCHACIGGTNVRNEMQKL 53
Query: 149 E-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDL 207
+ H+V GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +
Sbjct: 54 QAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSI 113
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
QVVL+SAT+P ++LE+T KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY
Sbjct: 114 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 173
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
+TLTITQAVIF NT+RKVDWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLI
Sbjct: 174 ETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLI 233
Query: 328 TTDVWARGLDVQQ 340
TTD+ ARG+DVQQ
Sbjct: 234 TTDLLARGIDVQQ 246
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 151/235 (64%), Positives = 194/235 (82%)
Query: 110 TREL---ATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDM 165
+REL A + +KVILA+GD++ HAC+GG +V +++KL+ H+V GTPGRV DM
Sbjct: 12 SRELYNYAFKIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDM 71
Query: 166 IKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTT 225
+ R+ L + IK+ VLDE+DEMLSRGFKDQIY++++ L +QVVL+SAT+P ++LE+T
Sbjct: 72 LNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTK 131
Query: 226 KFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKV 285
KFM DP++ILVK++ELTLEGIKQF++ VEREEWK DTLCDLY+TLTITQAVIF NT+RKV
Sbjct: 132 KFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKV 191
Query: 286 DWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ 340
DWLTEKM +FTVS++HGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQ
Sbjct: 192 DWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQ 246
>UNIPROTKB|J3KSZ0 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC016876 HGNC:HGNC:3282
ChiTaRS:EIF4A1 Ensembl:ENST00000583389 Uniprot:J3KSZ0
Length = 230
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 137/213 (64%), Positives = 178/213 (83%)
Query: 120 VILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKL 178
V++A+GD++ HAC+GG +V +++KL+ H++ GTPGRV DM+ R+ L + IK+
Sbjct: 2 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 61
Query: 179 LVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKR 238
VLDE+DEMLSRGFKDQIYD+++ L + QVVL+SAT+P ++LE+T KFM DP++ILVK+
Sbjct: 62 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 121
Query: 239 DELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFT 298
+ELTLEGI+QF++ VEREEWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM +FT
Sbjct: 122 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 181
Query: 299 VSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
VS+MHGDM QKERD IM EFRSG++RVLITTD+
Sbjct: 182 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 214
>WB|WBGene00018997 [details] [associations]
symbol:F57B9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 GO:GO:0019915 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 GeneTree:ENSGT00530000062880 KO:K03257
PIR:E88493 RefSeq:NP_498514.1 UniGene:Cel.32055
ProteinModelPortal:Q20935 SMR:Q20935 STRING:Q20935 PaxDb:Q20935
EnsemblMetazoa:F57B9.3 GeneID:186440 KEGG:cel:CELE_F57B9.3
UCSC:F57B9.3 CTD:186440 WormBase:F57B9.3 InParanoid:Q20935
NextBio:931850 Uniprot:Q20935
Length = 363
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 144/305 (47%), Positives = 216/305 (70%)
Query: 38 MGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDT 97
M +K++LLRGIY +GFEKPSAIQ+ AV P G+DV Q+Q+G+GKT + + + Q +D
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 98 SSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSG 157
+Q ++L+P R +A + + + ++G +N+ A C+G + E+ K+ H V+ G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAEN-DKISH---VLMG 115
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLP 217
TP I T R IK+ VLDE+DEMLS+GFKDQIY+V+R +P D+QVVL+SAT+P
Sbjct: 116 TPKDFLSNIPSDTSR---IKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMP 172
Query: 218 HEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 277
E+L++T +FM DP++ILVK+DELTLEGI+QF++ V+++EWKF+ LCDL T TQA+I
Sbjct: 173 SEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALI 232
Query: 278 FCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLD 337
FCNT+R+V LTE++ VS HG+M ER+ ++ +F S TRVL+TTD+ ARG++
Sbjct: 233 FCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMN 292
Query: 338 VQQAI 342
+++++
Sbjct: 293 IRKSL 297
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 126/306 (41%), Positives = 186/306 (60%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF+ +K +LL GI++ GFEKPS IQ+ ++ + GRD++A+A++GTGKT+ + Q
Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQ 90
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVH 153
V +VQALIL PTRELA QT +V+ +G + Q GG S+ +DI +L VH
Sbjct: 91 LVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVH 150
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
++ GTPGRV D+ RK + L V+DE+D+MLSR FK I + + PP+ Q +L S
Sbjct: 151 ILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLFS 210
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + K +T P +I + DELTL+GI QF+ VE E+ K L L+ L I
Sbjct: 211 ATFPLAVKSFMDKHLTKPYEINLM-DELTLKGISQFYAFVE-EKQKLHCLNTLFSKLQIN 268
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ +V+ L +K+ ++ H MPQ+ R+ + EFR G R L+ +D+
Sbjct: 269 QSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLT 328
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 329 RGIDIQ 334
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 126/306 (41%), Positives = 186/306 (60%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF+ +K +LL GI++ GFEKPS IQ+ ++ + GRD++A+A++GTGKT+ + Q
Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQ 90
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVH 153
V +VQALIL PTRELA QT +V+ +G + Q GG S+ +DI +L VH
Sbjct: 91 LVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVH 150
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
++ GTPGRV D+ RK + L V+DE+D+MLSR FK I + + PP+ Q +L S
Sbjct: 151 ILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLFS 210
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + K +T P +I + DELTL+GI QF+ VE E+ K L L+ L I
Sbjct: 211 ATFPLAVKSFMDKHLTKPYEINLM-DELTLKGISQFYAFVE-EKQKLHCLNTLFSKLQIN 268
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ +V+ L +K+ ++ H MPQ+ R+ + EFR G R L+ +D+
Sbjct: 269 QSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLT 328
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 329 RGIDIQ 334
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/307 (39%), Positives = 189/307 (61%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F +G+ D LL+ + GFE+ + IQ + ++G+D+I QAQ+GTGKT+ L +
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
VDT VQ ++++PTRELA Q + + IG ++ GG+ + IR L+
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH 120
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
H++ GTPGR+ D I RKTLR + ++ +VLDE+DEML+ GF + I + +P Q +L
Sbjct: 121 PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL 180
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT+P I + +FMT+P I VK E+T+ I+QF++ V+ E+ KFD L L D +
Sbjct: 181 FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQS 239
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A++F TKR+VD L+E + + +HGD+ Q +R +++ +F+ G+ VL+ TDV
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 332 WARGLDV 338
ARGLD+
Sbjct: 300 AARGLDI 306
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/307 (39%), Positives = 189/307 (61%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F +G+ D LL+ + GFE+ + IQ + ++G+D+I QAQ+GTGKT+ L +
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
VDT VQ ++++PTRELA Q + + IG ++ GG+ + IR L+
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH 120
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
H++ GTPGR+ D I RKTLR + ++ +VLDE+DEML+ GF + I + +P Q +L
Sbjct: 121 PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL 180
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT+P I + +FMT+P I VK E+T+ I+QF++ V+ E+ KFD L L D +
Sbjct: 181 FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQS 239
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A++F TKR+VD L+E + + +HGD+ Q +R +++ +F+ G+ VL+ TDV
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 332 WARGLDV 338
ARGLD+
Sbjct: 300 AARGLDI 306
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/307 (39%), Positives = 189/307 (61%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F +G+ D LL+ + GFE+ + IQ + ++G+D+I QAQ+GTGKT+ L +
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
VDT VQ ++++PTRELA Q + + IG ++ GG+ + IR L+
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH 120
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
H++ GTPGR+ D I RKTLR + ++ +VLDE+DEML+ GF + I + +P Q +L
Sbjct: 121 PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL 180
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT+P I + +FMT+P I VK E+T+ I+QF++ V+ E+ KFD L L D +
Sbjct: 181 FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQS 239
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A++F TKR+VD L+E + + +HGD+ Q +R +++ +F+ G+ VL+ TDV
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 332 WARGLDV 338
ARGLD+
Sbjct: 300 AARGLDI 306
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/307 (39%), Positives = 189/307 (61%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F +G+ D LL+ + GFE+ + IQ + ++G+D+I QAQ+GTGKT+ L +
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
VDT VQ ++++PTRELA Q + + IG ++ GG+ + IR L+
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH 120
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
H++ GTPGR+ D I RKTLR + ++ +VLDE+DEML+ GF + I + +P Q +L
Sbjct: 121 PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL 180
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT+P I + +FMT+P I VK E+T+ I+QF++ V+ E+ KFD L L D +
Sbjct: 181 FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQS 239
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A++F TKR+VD L+E + + +HGD+ Q +R +++ +F+ G+ VL+ TDV
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 332 WARGLDV 338
ARGLD+
Sbjct: 300 AARGLDI 306
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/307 (39%), Positives = 189/307 (61%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F +G+ D LL+ + GFE+ + IQ + ++G+D+I QAQ+GTGKT+ L +
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
VDT VQ ++++PTRELA Q + + IG ++ GG+ + IR L+
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH 120
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
H++ GTPGR+ D I RKTLR + ++ +VLDE+DEML+ GF + I + +P Q +L
Sbjct: 121 PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL 180
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT+P I + +FMT+P I VK E+T+ I+QF++ V+ E+ KFD L L D +
Sbjct: 181 FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQS 239
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A++F TKR+VD L+E + + +HGD+ Q +R +++ +F+ G+ VL+ TDV
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 332 WARGLDV 338
ARGLD+
Sbjct: 300 AARGLDI 306
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/307 (39%), Positives = 189/307 (61%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F +G+ D LL+ + GFE+ + IQ + ++G+D+I QAQ+GTGKT+ L +
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
VDT VQ ++++PTRELA Q + + IG ++ GG+ + IR L+
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH 120
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
H++ GTPGR+ D I RKTLR + ++ +VLDE+DEML+ GF + I + +P Q +L
Sbjct: 121 PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL 180
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT+P I + +FMT+P I VK E+T+ I+QF++ V+ E+ KFD L L D +
Sbjct: 181 FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQS 239
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A++F TKR+VD L+E + + +HGD+ Q +R +++ +F+ G+ VL+ TDV
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 332 WARGLDV 338
ARGLD+
Sbjct: 300 AARGLDI 306
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/307 (39%), Positives = 189/307 (61%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F +G+ D LL+ + GFE+ + IQ + ++G+D+I QAQ+GTGKT+ L +
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
VDT VQ ++++PTRELA Q + + IG ++ GG+ + IR L+
Sbjct: 61 LDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKH 120
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
H++ GTPGR+ D I RKTLR + ++ +VLDE+DEML+ GF + I + +P Q +L
Sbjct: 121 PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLL 180
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT+P I + +FMT+P I VK E+T+ I+QF++ V+ E+ KFD L L D +
Sbjct: 181 FSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQ-EKKKFDVLTRLLDIQS 239
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A++F TKR+VD L+E + + +HGD+ Q +R +++ +F+ G+ VL+ TDV
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 332 WARGLDV 338
ARGLD+
Sbjct: 300 AARGLDI 306
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 122/306 (39%), Positives = 183/306 (59%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F+ +K +LL GI++ GFEKPS IQ+ A+ I GRD++A+A++GTGKT+ + +
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVH 153
V ++QALI+ PTRELA QT +V+ +G I GG ++ +DI +L VH
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
++ GTPGRV D+ RK L ++DE+D+MLSR FK I + +LPP Q +L S
Sbjct: 167 ILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFS 226
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + E K + P +I + +ELTL+GI Q++ VE E K L L+ L I
Sbjct: 227 ATFPLTVKEFMVKHLHKPYEINLM-EELTLKGITQYYAFVE-ERQKLHCLNTLFSKLQIN 284
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
QA+IFCN+ +V+ L +K+ ++ H M Q+ER+ + EFR G R L+ +D+
Sbjct: 285 QAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLT 344
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 345 RGIDIQ 350
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 119/316 (37%), Positives = 194/316 (61%)
Query: 26 TEGVEAI--TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGK 83
TE V A F+ +K +LL GIY+ GFE+PS IQ+ ++ + GRD++A+A++GTGK
Sbjct: 122 TEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGK 181
Query: 84 TSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGE 143
T+ + V + +D + +QA+I+ PTRELA QT +V +G + IQ GG S+ +
Sbjct: 182 TAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKD 241
Query: 144 DIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
DI +L VH++ GTPGR+ D+ K+ + +LV+DE+D++LS+ F+ + + +L
Sbjct: 242 DIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFL 301
Query: 204 PPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTL 263
P Q+++ SAT P + + +F+T+P I + DELTL+GI QF+ VE E K L
Sbjct: 302 PESRQILMFSATFPVTVKDFKDRFLTNPYVINLM-DELTLKGITQFYAFVE-ERQKIHCL 359
Query: 264 CDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTT 323
L+ L I Q++IFCN+ +V+ L +K+ ++ +H M Q R+ + +FR+G
Sbjct: 360 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 419
Query: 324 RVLITTDVWARGLDVQ 339
R L+ TD++ RG+D+Q
Sbjct: 420 RNLVCTDLFTRGIDIQ 435
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 119/314 (37%), Positives = 191/314 (60%)
Query: 26 TEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTS 85
T+G+E F+ G+K DLL GI++ GFEKPS IQ+ ++ + GRD++A+A++GTGKT+
Sbjct: 44 TKGLE----FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTA 99
Query: 86 MIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDI 145
+ +T++ ++Q LIL PTRELA QT +V +G + I GG ++ +DI
Sbjct: 100 AFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDI 159
Query: 146 RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP 205
+L+ VH+V GTPGR+ D+ + + ++DE+D++LS F I + ++ P
Sbjct: 160 LRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPK 219
Query: 206 DLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 265
D QV+L SAT P + E + K MT+P +I + DELTL GI Q++ VE E+ K L
Sbjct: 220 DRQVMLFSATFPISVKEFSDKNMTNPYEINLM-DELTLRGITQYYAFVE-EKQKVHCLNT 277
Query: 266 LYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRV 325
L+ L I Q++IFCN+ +V+ L +K+ ++ H M Q+ R+ + +FR+G R
Sbjct: 278 LFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQQARNRVFHDFRNGVCRN 337
Query: 326 LITTDVWARGLDVQ 339
L+ +D+ RG+D+Q
Sbjct: 338 LVCSDLLTRGIDIQ 351
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 116/305 (38%), Positives = 183/305 (60%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F + DL + I + GFE+ + IQ + + + +DVI QAQ+GTGKT+ + + +
Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVH 153
++ S +QA++++PTRELA Q + + IG + GG+ +G IR L+ H
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPH 123
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
++ GTPGR+ D I R+T+R + + +VLDE+DEML+ GF + I + +P + Q +L S
Sbjct: 124 IIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFS 183
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT+P I + +FMT+P + VK E+T+ I+QF++ V E KFDTL L D +
Sbjct: 184 ATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVH-ERKKFDTLTRLLDIQSPE 242
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
A++F TKR+VD LTE + +T +HGD+ Q +R + +F+ G VL+ TDV A
Sbjct: 243 LAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAA 302
Query: 334 RGLDV 338
RGLD+
Sbjct: 303 RGLDI 307
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 125/311 (40%), Positives = 188/311 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG--RDVIAQAQSGTGKTSMIA 88
++ SF+ +G+ +LL+G+Y F KPS IQ++A+ ++ R++I Q+QSGTGKT+ +
Sbjct: 148 SVKSFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFS 207
Query: 89 LTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKL 148
LT+ VD + + Q L LSPTRELA QT +VI +G F NI V R
Sbjct: 208 LTMLSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVVPNAIP----RGS 263
Query: 149 EHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRYLPPDL 207
V+ GTPG D+I+R+ L +K+ VLDE+D ML ++G DQ V + LP +
Sbjct: 264 SVNAQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALPRGV 323
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
Q+VL SAT P E+ E + + D + +K++EL ++GIKQ ++ E+ KF+ LC+LY
Sbjct: 324 QLVLFSATFPTEVREYAERLVPDANSLELKQEELNVDGIKQLYMDCRSEQHKFEVLCELY 383
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
LTI ++IF K D L KM+ TVS +HG + +RD ++ +FR G ++VLI
Sbjct: 384 GLLTIGSSIIFVEKKETADVLYGKMKKEGHTVSVLHGGLDNTDRDRLIDDFREGRSKVLI 443
Query: 328 TTDVWARGLDV 338
TT+V ARG+D+
Sbjct: 444 TTNVLARGIDI 454
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 113/307 (36%), Positives = 186/307 (60%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F +G+ ++++ I + GFE+ + IQ + + ++ +DVI QAQ+GTGKT+ + +
Sbjct: 1 MTTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI 60
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
+ V+ + VQAL+++PTRELA Q + + IG ++ GG+ + IR L+
Sbjct: 61 VEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKH 120
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
HV+ GTPGR+ D I R TLR + +VLDE+DEML+ GF + I + ++P + Q +L
Sbjct: 121 PHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLL 180
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT+P I + +FM +P + VK E+T+ I+Q+++ V E+ KFD L L D
Sbjct: 181 FSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVH-EKKKFDILTRLLDIQA 239
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A++F TKR+VD L E + + +HGD+ Q +R +++ +F+ G +L+ TDV
Sbjct: 240 PELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDV 299
Query: 332 WARGLDV 338
ARGLD+
Sbjct: 300 AARGLDI 306
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 113/305 (37%), Positives = 187/305 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K DLL+GIY+ GFEKPS IQ+ ++ + G D++A+A++GTGKT + V +
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHV 154
+D ++ +QA+IL PTRELA QT +V + ++NIQ GG S+ +DI +L VH+
Sbjct: 186 IDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHL 245
Query: 155 VSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISA 214
+ GTPGR+ D+ K+ + +LV+DE+D++LS F+ + ++ ++LP + Q ++ SA
Sbjct: 246 LVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSA 305
Query: 215 TLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
T P + + + P I + D+LTL G+ Q++ VE E K L L+ L I Q
Sbjct: 306 TFPVTVKAFKDRHLRKPYVINLM-DQLTLMGVTQYYAFVE-ERQKVHCLNTLFSKLQINQ 363
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
++IFCN+ +V+ L +K+ ++ +H M Q R+ + EFR+G R L+ TD++ R
Sbjct: 364 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTR 423
Query: 335 GLDVQ 339
G+D+Q
Sbjct: 424 GIDIQ 428
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 113/305 (37%), Positives = 182/305 (59%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F + DL++ I + GFE+ + IQ + + + +DVI QAQ+GTGKT+ + + +
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVH 153
++ S +QA++++PTRELA Q + + IG + GG+ +G IR L+ +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
++ GTPGR+ D I R+T+R + +V+DE+DEML+ GF D I + +P + Q +L S
Sbjct: 124 IIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS 183
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT+P I + +FMT+P + VK E+T+ I+QF++ V+ E KFDTL L D +
Sbjct: 184 ATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQ-ERKKFDTLTRLLDIQSPE 242
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
A++F TKR+VD L E + + +HGD+ Q +R + +F+ G VL+ TDV A
Sbjct: 243 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAA 302
Query: 334 RGLDV 338
RGLD+
Sbjct: 303 RGLDI 307
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 124/313 (39%), Positives = 193/313 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG--RDVIAQAQSGTGKTSMIA 88
++ SF+ + +K +LL+GIY F+KPS IQ++A+ ++ R++I Q+QSGTGKT+ A
Sbjct: 112 SVKSFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFA 171
Query: 89 LTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKL 148
LT+ VD S + QA+ L+P+RELA Q V+ +G + ++ G K K+
Sbjct: 172 LTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVKT--AFGIKDSVPKGAKI 229
Query: 149 EHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDL 207
+ +V GTPG V D++KR+ L R IK+ VLDE+D ML + G DQ + LP +
Sbjct: 230 D--AQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNT 287
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
Q+VL SAT + + +F + +I +K +EL++EGIKQ ++ + EE K++ L +LY
Sbjct: 288 QIVLFSATFSERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELY 347
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
LTI Q++IFC K + + +M TV+ + G++ +RDAIM FR GT++VL+
Sbjct: 348 GLLTIGQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLV 407
Query: 328 TTDVWARGLDVQQ 340
TT+V ARG+DV Q
Sbjct: 408 TTNVIARGIDVSQ 420
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 115/316 (36%), Positives = 189/316 (59%)
Query: 26 TEGVEAI--TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGK 83
TE V A F+ +K DLLRGIY+ GFEKPS IQ+ ++ + G D++A+A++GTGK
Sbjct: 145 TEDVTATKGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGK 204
Query: 84 TSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGE 143
T + + +D + +QA+IL PTRELA QT +V + ++ I+ GG S+ +
Sbjct: 205 TGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRD 264
Query: 144 DIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
DI +L VH++ GTPGR+ D+ K+ + +LV+DE+D++LS F+ I ++ ++L
Sbjct: 265 DIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFL 324
Query: 204 PPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTL 263
P Q+++ SAT P + +++ P I+ D+LTL G+ Q++ VE E K L
Sbjct: 325 PESRQILMFSATFPVTVKSFKDRYLKKPY-IINLMDQLTLMGVTQYYAFVE-ERQKVHCL 382
Query: 264 CDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTT 323
L+ L I Q++IFCN+ +V+ L +K+ ++ +H M Q R+ + +FR+G
Sbjct: 383 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGAC 442
Query: 324 RVLITTDVWARGLDVQ 339
R L+ TD++ RG+D+Q
Sbjct: 443 RNLVCTDLFTRGIDIQ 458
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 113/316 (35%), Positives = 191/316 (60%)
Query: 26 TEGVEAI--TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGK 83
TE V A FD + +K DLLRGI++ G+ KPS IQ++A+ + GRD++A+A++GTGK
Sbjct: 40 TEDVTATEGNDFDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGK 99
Query: 84 TSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGE 143
T+ + + D + +Q LIL PTRELA QT +V +G ++N+Q A GG S+ +
Sbjct: 100 TASFLIPALEKTDPTKDVIQVLILVPTRELALQTSQVCKELGKYMNVQVMASTGGTSLKD 159
Query: 144 DIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
DI +L + VH++ TPGRV D+ ++ +++DE+D++LS+ F+ + + +L
Sbjct: 160 DIMRLYNPVHILVATPGRVLDLAQKNVANLSNCHTMIMDEADKLLSQEFQPLVEQLINFL 219
Query: 204 PPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTL 263
P Q++L SAT P + ++ +I + +ELTL+G+ Q++ VE E K L
Sbjct: 220 PQQRQILLFSATFPVTVKSFKEHYLQQAFEINLM-EELTLKGVTQYYAFVE-ERQKIHCL 277
Query: 264 CDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTT 323
L+ L I Q++IFCN+ +V+ L +K+ ++ +H M Q R+ + +FR+G
Sbjct: 278 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGAC 337
Query: 324 RVLITTDVWARGLDVQ 339
R L+++D++ RG+D+Q
Sbjct: 338 RNLVSSDLFTRGIDIQ 353
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 125/316 (39%), Positives = 194/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 92 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPLMLAEPPQNLIAQSQSGTGKTAAF 150
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ ++R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 151 VLAMLSQVEPANRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKL-ERGQ 209
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ H+V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 210 KISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 267
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 268 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALC 327
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 328 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEK 387
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 388 VLVTTNVCARGIDVEQ 403
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 124/316 (39%), Positives = 194/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 95 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPLMLAEPPQNLIAQSQSGTGKTAAF 153
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ ++R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 154 VLAMLSQVEPANRHPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKL-ERGQ 212
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ H+V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 213 KISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 270
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 271 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALC 330
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
++Y +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 331 NIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEK 390
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 391 VLVTTNVCARGIDVEQ 406
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 125/316 (39%), Positives = 193/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 89 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 147
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ + R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 148 VLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKL-ERGQ 206
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ H+V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 207 KISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 265 KNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALC 324
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 325 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 384
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 385 VLVTTNVCARGIDVEQ 400
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 121/318 (38%), Positives = 195/318 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ + +K++LL+GIY GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 95 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAF 153
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GED 144
L + V+ Q L L+PT ELA QT +V+ +G F ++++ + G + G D
Sbjct: 154 VLAMLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTD 213
Query: 145 IRKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRY 202
+ K +V GTPG V D KRK + I++ VLDE+D M+ ++GF DQ + R
Sbjct: 214 VTK-----QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRA 268
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LP + Q++L SAT + + + + DP I ++++ELTL I+Q++V E + K+
Sbjct: 269 LPSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKDKYQA 328
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
LC++Y +TI QA+IFC T+R WLT +M VS + G++ ++R +I+ FR G
Sbjct: 329 LCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGK 388
Query: 323 TRVLITTDVWARGLDVQQ 340
+VLITT+V ARG+DV+Q
Sbjct: 389 EKVLITTNVCARGIDVKQ 406
>UNIPROTKB|E9PTL9 [details] [associations]
symbol:Ddx19b "Protein Ddx19b" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1593382 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00959699
Ensembl:ENSRNOT00000059034 ArrayExpress:E9PTL9 Uniprot:E9PTL9
Length = 482
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 126/316 (39%), Positives = 193/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 93 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPLMLAEPPQNLIAQSQSGTGKTAAF 151
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ + R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 152 VLAMLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKL-ERGQ 210
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ G +V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 211 KV--GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 268
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V E KF LC
Sbjct: 269 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALC 328
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 329 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 388
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 389 VLVTTNVCARGIDVEQ 404
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 121/318 (38%), Positives = 194/318 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ + +K++LL+GIY GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 74 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAF 132
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GED 144
L + V+T Q L L+PT ELA QT +V+ +G F +++Q + G + G D
Sbjct: 133 VLAMLSRVNTLELFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTD 192
Query: 145 IRKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRY 202
+ K ++ GTPG V D KRK + I++ VLDE+D M+ ++GF DQ + R
Sbjct: 193 VTK-----QIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRA 247
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LP + Q++L SAT + + + + DP I ++++ELTL I+Q++V E + K+
Sbjct: 248 LPSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQA 307
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
LC++Y +TI QA+IFC T+R WLT +M VS + G++ +R +I+ FR G
Sbjct: 308 LCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGK 367
Query: 323 TRVLITTDVWARGLDVQQ 340
+VLITT+V RG+DV+Q
Sbjct: 368 EKVLITTNVSRRGIDVKQ 385
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 125/316 (39%), Positives = 193/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 89 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 147
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ + R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 148 VLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKL-ERGQ 206
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ H+V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 207 KISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALC 324
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 325 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEK 384
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 385 VLVTTNVCARGIDVEQ 400
>RGD|1303136 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEP] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524 GO:GO:0006917
GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 126/316 (39%), Positives = 193/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 89 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 147
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ + R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 148 VLAMLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKL-ERGQ 206
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ G +V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 207 KV--GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V E KF LC
Sbjct: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALC 324
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 325 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 384
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 385 VLVTTNVCARGIDVEQ 400
>RGD|1593382 [details] [associations]
symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box polypeptide 19B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524
GO:GO:0006917 GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 126/316 (39%), Positives = 193/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 89 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 147
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ + R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 148 VLAMLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKL-ERGQ 206
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ G +V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 207 KV--GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V E KF LC
Sbjct: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALC 324
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 325 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 384
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 385 VLVTTNVCARGIDVEQ 400
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 119/318 (37%), Positives = 195/318 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ + +K++LL+GIY GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 96 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAF 154
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GED 144
L + V+ Q L L+PT ELA QT +V+ +G F ++++ + G + G +
Sbjct: 155 VLAMLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTE 214
Query: 145 IRKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRY 202
+ K ++ GTPG V D KRK + I++ VLDE+D M+ ++GF DQ + R
Sbjct: 215 VTK-----QIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRA 269
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LP + Q++L SAT + + + + DP I ++++ELTL I+Q++V E + K+
Sbjct: 270 LPSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKGKYQA 329
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
LC++Y +TI QA+IFC T+R WLT +M VS + G++ ++R +I+ FR G
Sbjct: 330 LCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGK 389
Query: 323 TRVLITTDVWARGLDVQQ 340
+VLITT+V ARG+DV+Q
Sbjct: 390 EKVLITTNVCARGIDVKQ 407
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 120/308 (38%), Positives = 191/308 (62%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG--RDVIAQAQSGTGKTSMIALTV 91
SFD +G+ +LL+GIY F+KPS IQ+RA+ ++ R++IAQ+QSGTGKT+ +LT+
Sbjct: 93 SFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTM 152
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
V+ QA+ L+P+RELA QT +V+ +G F I + V E +++
Sbjct: 153 LTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIVPDSF--EKNKQIN-- 208
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVV 210
V+ GTPG V D+++RK ++ + IK+ VLDE+D ML + G DQ V R+LP D Q+V
Sbjct: 209 AQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLV 268
Query: 211 LISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 270
L SAT + + K + + + ++ +E+ ++ IKQ ++ + E KFD L +LY +
Sbjct: 269 LFSATFADAVRQYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLM 328
Query: 271 TITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTD 330
TI ++IF TK+ + L K++ VS +HGD+ +ERD ++ +FR G ++VLITT+
Sbjct: 329 TIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTN 388
Query: 331 VWARGLDV 338
V ARG+D+
Sbjct: 389 VLARGIDI 396
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 124/316 (39%), Positives = 193/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 89 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 147
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ + R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 148 VLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKL-ERGQ 206
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ H+V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 207 KISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALC 324
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
++Y +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 325 NIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEK 384
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 385 VLVTTNVCARGIDVEQ 400
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 125/316 (39%), Positives = 192/316 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 89 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 147
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ S R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 148 VLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKL-ERGQ 206
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ +V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 207 KISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALC 324
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 325 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 384
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 385 VLVTTNVCARGIDVEQ 400
>ZFIN|ZDB-GENE-080721-12 [details] [associations]
symbol:zgc:193690 "zgc:193690" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-080721-12 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
EMBL:CR846089 IPI:IPI00928637 ProteinModelPortal:F1Q5T4
Ensembl:ENSDART00000134461 ArrayExpress:F1Q5T4 Bgee:F1Q5T4
Uniprot:F1Q5T4
Length = 492
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 123/316 (38%), Positives = 194/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ + +K LL+G+Y+ GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 82 SVKTFEELRLKPQLLKGVYEMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 140
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + VD + + Q L +SPT ELA QT KVI +G F + V G + +R
Sbjct: 141 VLAMLSHVDPACKWSQCLCISPTYELALQTGKVIEQMGKFYPEVTLAYAVRGHRMERGVR 200
Query: 147 KLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
+ +V GTPG V D IK K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 201 IKDQ---IVIGTPGTVLDWCIKLKLIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 257
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
Q++L SAT + + + + DP I +KR+E TL+ IKQ++V +E KF+ LC
Sbjct: 258 KGCQMLLFSATFEDSVWKFAERVVPDPNIIKLKREEETLDTIKQYYVLCNSKEDKFNALC 317
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
++Y +TI QA+IFC+T++ +WL +M V+ + G+M ++R A++ FR G +
Sbjct: 318 NIYGAITIAQAMIFCHTRKMANWLAGQMSKEGHQVALLSGEMVVEQRAAVIERFRDGKEK 377
Query: 325 VLITTDVWARGLDVQQ 340
VLITT+V ARG+DV+Q
Sbjct: 378 VLITTNVCARGIDVEQ 393
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 121/318 (38%), Positives = 194/318 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ + +K++LL+GIY GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 95 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAF 153
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GED 144
L + V+ Q L L+PT ELA QT +V+ +G F +++Q + G + G D
Sbjct: 154 VLAMLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTD 213
Query: 145 IRKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRY 202
+ K +V GTPG V D KRK + I++ VLDE+D M+ ++GF+DQ + R
Sbjct: 214 VTK-----QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRA 268
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LP + Q++L SAT + + + + DP I ++++ELTL I+Q++V + K+
Sbjct: 269 LPSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQA 328
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
LC++Y +TI QA+IFC T+R WLT +M VS + G++ +R +I+ FR G
Sbjct: 329 LCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGK 388
Query: 323 TRVLITTDVWARGLDVQQ 340
+VLITT+V ARG+DV+Q
Sbjct: 389 EKVLITTNVCARGIDVKQ 406
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 122/318 (38%), Positives = 192/318 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ + +K++LL+GIY GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 74 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAF 132
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GED 144
L + V+ Q L L+PT ELA QT +V+ +G F +++Q + G + G D
Sbjct: 133 VLAMLSRVNALELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTD 192
Query: 145 IRKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRY 202
I K ++ GTPG V D KRK + I++ VLDE+D M+ ++GF DQ + R
Sbjct: 193 ITK-----QIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRA 247
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LP Q++L SAT + + + + DP I ++++ELTL I+Q++V + K+
Sbjct: 248 LPSGCQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQA 307
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
LC++Y +TI QA+IFC T+R WLT +M VS + G++ +R AI+ FR G
Sbjct: 308 LCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLRGELTVDQRAAIIQRFRDGK 367
Query: 323 TRVLITTDVWARGLDVQQ 340
+VLITT+V ARG+DV+Q
Sbjct: 368 EKVLITTNVCARGIDVKQ 385
>UNIPROTKB|Q9DGP9 [details] [associations]
symbol:deadsouth "ATP-dependent RNA helicase DDX25"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
Length = 483
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 121/322 (37%), Positives = 192/322 (59%)
Query: 24 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG--RDVIAQAQSGT 81
+ T + ++ SF+ + +K++LLRGIY GF +PS IQ+ A+ ++ +++IAQ+QSGT
Sbjct: 88 DPTSPLFSVKSFEELHLKNELLRGIYAMGFNRPSKIQENALPMMLADPPQNLIAQSQSGT 147
Query: 82 GKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKS 140
GKT+ L + VD + + Q + LSPT ELA QT KV+ +G F I+ + G
Sbjct: 148 GKTAAFVLAMLSRVDANKKYPQCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNR 207
Query: 141 VGEDIRKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYD 198
G+ R LE +V GTPG V D K + + I + VLDE+D M++ +G D
Sbjct: 208 PGKGSR-LE--AQIVIGTPGTVLDWCFKLRLITVENISVFVLDEADVMINVQGHSDHSVR 264
Query: 199 VYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEW 258
V R +P Q++L SAT + + + DP I +K++ELTL+ I+QF+ E +E
Sbjct: 265 VKRSMPKSCQMLLFSATFEDSVWAFAERIVPDPNIIKLKKEELTLKNIQQFYDQCENKEQ 324
Query: 259 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEF 318
K+ LC+LY +TI QA++FC T++ WL++K+ V+ + G++P +R ++ F
Sbjct: 325 KYSALCNLYGVITIAQAIVFCQTRKIASWLSQKLSDDGHQVALLSGELPVYDRADMIQRF 384
Query: 319 RSGTTRVLITTDVWARGLDVQQ 340
R G +VL+TT+V ARG+DV+Q
Sbjct: 385 REGREKVLVTTNVCARGIDVEQ 406
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 108/305 (35%), Positives = 190/305 (62%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + G++++A+A++GTGKT+ A+ + +
Sbjct: 62 FEDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLEK 121
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHV 154
+T +Q LIL PTRELA QT +I +G + +Q GG S+ EDI +L + VH+
Sbjct: 122 CNTHKNFIQGLILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVVHI 181
Query: 155 VSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISA 214
+ GTPGR+ D+ + ++V+DE+D++LS F+ + ++ ++LP + Q+++ SA
Sbjct: 182 LCGTPGRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYSA 241
Query: 215 TLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
T P + E +++D +I + DELTL+GI Q++ V +E K L L+ L I Q
Sbjct: 242 TFPVTVKEFRAIYLSDAHEINLM-DELTLKGITQYYAFV-KERQKVHCLNTLFAKLQINQ 299
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
A+IFCN+ +V+ L +K+ ++ +H M Q R+ + +FR+G R L+++D++ R
Sbjct: 300 AIIFCNSITRVELLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTR 359
Query: 335 GLDVQ 339
G+D+Q
Sbjct: 360 GIDIQ 364
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 121/318 (38%), Positives = 193/318 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ + +K++LL+GIY GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 95 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAF 153
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GED 144
L + V+ Q L L+PT ELA QT +V+ +G F +++Q + G + G D
Sbjct: 154 VLAMLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTD 213
Query: 145 IRKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRY 202
+ K +V GTPG V D KRK + I++ VLDE+D M+ ++GF DQ + R
Sbjct: 214 VTK-----QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFADQSIRIQRA 268
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LP + Q++L SAT + + + + DP I ++++ELTL I+Q++V + K+
Sbjct: 269 LPSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQA 328
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
LC++Y +TI QA+IFC T+R WLT +M VS + G++ +R +I+ FR G
Sbjct: 329 LCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGK 388
Query: 323 TRVLITTDVWARGLDVQQ 340
+VLITT+V ARG+DV+Q
Sbjct: 389 EKVLITTNVCARGIDVKQ 406
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 125/316 (39%), Positives = 192/316 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 89 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 147
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ + R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 148 VLAMLSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKL-ERGQ 206
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ +V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 207 KVSE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V E KF LC
Sbjct: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALC 324
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 325 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 384
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 385 VLVTTNVCARGIDVEQ 400
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 123/316 (38%), Positives = 193/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 95 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPLMLAEPPQNLIAQSQSGTGKTAAF 153
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ +++ Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 154 VLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKL-ERGQ 212
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ +V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 213 KISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 270
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 271 RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALC 330
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 331 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 390
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 391 VLVTTNVCARGIDVEQ 406
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 123/316 (38%), Positives = 193/316 (61%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 90 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPLMLAEPPQNLIAQSQSGTGKTAAF 148
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ +++ Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 149 VLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKL-ERGQ 207
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ +V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 208 KISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 265
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 266 RNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALC 325
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 326 NLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 385
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 386 VLVTTNVCARGIDVEQ 401
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 120/318 (37%), Positives = 193/318 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ + +K++LL+GIY GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 98 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAF 156
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GED 144
L + V+ Q L L+PT ELA QT +V+ +G F +++Q + G + G D
Sbjct: 157 VLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTD 216
Query: 145 IRKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRY 202
I K ++ GTPG V D K K + I++ VLDE+D M+ ++GF D + R
Sbjct: 217 ITK-----QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRA 271
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LP + Q++L SAT + + + DP I ++++ELTL I+Q++V E + K+
Sbjct: 272 LPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQA 331
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
LC++Y ++TI QA+IFC T+R WLT +M VS + G++ ++R +I+ FR G
Sbjct: 332 LCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGK 391
Query: 323 TRVLITTDVWARGLDVQQ 340
+VLITT+V ARG+DV+Q
Sbjct: 392 EKVLITTNVCARGIDVKQ 409
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 120/318 (37%), Positives = 193/318 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ + +K++LL+GIY GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 95 SVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAF 153
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GED 144
L + V+ Q L L+PT ELA QT +V+ +G F +++Q + G + G D
Sbjct: 154 VLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTD 213
Query: 145 IRKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRY 202
I K ++ GTPG V D K K + I++ VLDE+D M+ ++GF D + R
Sbjct: 214 ITK-----QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRA 268
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
LP + Q++L SAT + + + DP I ++++ELTL I+Q++V E + K+
Sbjct: 269 LPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQA 328
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
LC++Y ++TI QA+IFC T+R WLT +M VS + G++ ++R +I+ FR G
Sbjct: 329 LCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGK 388
Query: 323 TRVLITTDVWARGLDVQQ 340
+VLITT+V ARG+DV+Q
Sbjct: 389 EKVLITTNVCARGIDVKQ 406
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 109/306 (35%), Positives = 190/306 (62%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 90 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 149
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA++L PTRELA Q ++ + + + I+ A GG ++ +DI +L+ VH
Sbjct: 150 IDLKKDYIQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLDEIVH 209
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
V+ TPGR+ D+IK+ + +++ V+DE+D++LS+ F I D+ +LP Q++L S
Sbjct: 210 VIIATPGRILDLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIEDIISFLPKKRQILLYS 269
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + TK + P +I + DELTL+GI Q++ V E K L L+ L I
Sbjct: 270 ATFPISVQKFMTKHLQKPYEINLM-DELTLKGITQYYAYVT-ERQKVHCLNTLFSRLQIN 327
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 328 QSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFT 387
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 388 RGIDIQ 393
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 122/316 (38%), Positives = 192/316 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 90 SVKSFEELHLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 148
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ ++ Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 149 VLAMLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKL-ERGQ 207
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ +V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 208 KISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 265
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
D Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 266 RDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFRALC 325
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
++Y +TI QA++FC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 326 NIYGAITIAQAMVFCHTRKTAGWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEK 385
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 386 VLVTTNVCARGIDVEQ 401
>RGD|735141 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0031100 "organ regeneration" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
PROSITE:PS51194 RGD:735141 GO:GO:0005524 GO:GO:0031100
GO:GO:0003743 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG107989 HSSP:P10081 IPI:IPI00369618 UniGene:Rn.91523
EMBL:AF410810 ProteinModelPortal:Q812C4 IntAct:Q812C4 STRING:Q812C4
PRIDE:Q812C4 UCSC:RGD:735141 InParanoid:Q812C4 ArrayExpress:Q812C4
Genevestigator:Q812C4 Uniprot:Q812C4
Length = 138
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 100/136 (73%), Positives = 121/136 (88%)
Query: 180 VLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRD 239
VLDE+DEMLSRGFKDQIYD+++ L + QVVL+SAT+P ++LE+T KFM DP++ILVK++
Sbjct: 2 VLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKE 61
Query: 240 ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTV 299
ELTLEGI+QF++ VEREEWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM +FTV
Sbjct: 62 ELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTV 121
Query: 300 SSMHGDMPQKERDAIM 315
S+MHGDM QKERD IM
Sbjct: 122 SAMHGDMDQKERDVIM 137
>UNIPROTKB|J3QL43 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584784
Uniprot:J3QL43
Length = 271
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 100/180 (55%), Positives = 137/180 (76%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 88
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 89 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 148
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L + Q
Sbjct: 149 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQ 208
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 81/210 (38%), Positives = 113/210 (53%)
Query: 101 EVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTP 159
+V A S T + AT ++ I D QA + + + I+K+ + G
Sbjct: 71 DVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGAS 130
Query: 160 GRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVY--RYLPPDLQVVLISATLP 217
C I +R KL + E+ ++ G +++D+ RYL P I +
Sbjct: 131 CHAC--IGGTNVRAEVQKLQM--EAPHIIV-GTPGRVFDMLNRRYLSPKY----IKMFVL 181
Query: 218 HEILEMTTKFMTDPV-KILVK-----RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
E EM ++ D + I K ++ELTLEGI+QF++ VEREEWK DTLCDLY+TLT
Sbjct: 182 DEADEMLSRGFKDQIYDIFQKLNSNTQEELTLEGIRQFYINVEREEWKLDTLCDLYETLT 241
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSS 301
ITQAVIF NT+RKVDWLTEKM +FTVS+
Sbjct: 242 ITQAVIFINTRRKVDWLTEKMHARDFTVSA 271
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 116/314 (36%), Positives = 181/314 (57%)
Query: 26 TEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTS 85
T+G+E F+ IK +L+ GI++ GFEKPS IQ+ + + GRD++A+A++GTGKT+
Sbjct: 36 TKGLE----FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTA 91
Query: 86 MIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDI 145
+ + ++ S + QALIL PTRELA QT V +G + I GG + +DI
Sbjct: 92 AFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDI 151
Query: 146 RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP 205
+L VH++ GTPGRV D+ + V+DE+D++LS F I + + P
Sbjct: 152 IRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSFHPK 211
Query: 206 DLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 265
D QV+L SAT P + + M +P +I + DELTL GI Q++ VE E+ K L
Sbjct: 212 DRQVMLFSATFPMIVKSFKDRHMRNPYEINLM-DELTLRGITQYYAFVE-EKQKVHCLNT 269
Query: 266 LYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRV 325
L+ L I Q++IFCN+ +V+ L +K+ ++ H M Q+ R+ + +FR+G R
Sbjct: 270 LFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRN 329
Query: 326 LITTDVWARGLDVQ 339
L+ +D+ RG+D+Q
Sbjct: 330 LVCSDLLTRGIDIQ 343
>FB|FBgn0024804 [details] [associations]
symbol:Dbp80 "Dead box protein 80" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0044614 "nuclear pore
cytoplasmic filaments" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AF005239 ProteinModelPortal:O61305 SMR:O61305 PaxDb:O61305
PRIDE:O61305 FlyBase:FBgn0024804 InParanoid:O61305
OrthoDB:EOG4BCC38 Bgee:O61305 GermOnline:CG17023 Uniprot:O61305
Length = 460
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 116/317 (36%), Positives = 191/317 (60%)
Query: 29 VEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG--RDVIAQAQSGTGKTSM 86
+ ++ +F+A+ +K LL+GIY GF PS IQ+ A+ ++ +++IAQ+QSGTGKT+
Sbjct: 69 LHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAA 128
Query: 87 IALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDI 145
L + V+ Q L LSPT ELA QT +V +G F I+ V G+ V
Sbjct: 129 FVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRS- 187
Query: 146 RKLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYL 203
+K+E H++ GTPG++ D IK + + I + VLDE+D M++ +G DQ +++ L
Sbjct: 188 KKIEE--HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKML 245
Query: 204 PPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTL 263
P Q++ SAT E+++ + DP I + R+E +LE IKQ++V + EE K++ +
Sbjct: 246 NPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAI 305
Query: 264 CDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTT 323
++Y +++ QA+IFC+TKR WL KM +V+ + GD+ +R ++ FRSG
Sbjct: 306 QNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLE 365
Query: 324 RVLITTDVWARGLDVQQ 340
+VLITT++ +RG+D++Q
Sbjct: 366 KVLITTNILSRGIDIEQ 382
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 113/304 (37%), Positives = 177/304 (58%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F +G+ LL+ + GFE P+ IQ+ A+ I++G +++ QA +GTGKT+ L V Q
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHV 154
+ ++ Q LI++PTRELA Q + +G ++ ++A A GG+++ IR L GV V
Sbjct: 64 IQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 155 VSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISA 214
+ GTPGR+ D I RKT IK+++LDE+DEML GF D I + L Q +L SA
Sbjct: 123 IVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSA 182
Query: 215 TLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
TLP I + KF+ + + E T+ I+Q + + E K + L + ++ Q
Sbjct: 183 TLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETE-KIEGLVSILNSELPIQ 241
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
A++FC TK++VD + E++ + +HGDM Q+ER + F++G T +L+ TDV AR
Sbjct: 242 AIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAAR 301
Query: 335 GLDV 338
GLD+
Sbjct: 302 GLDI 305
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 113/304 (37%), Positives = 177/304 (58%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F +G+ LL+ + GFE P+ IQ+ A+ I++G +++ QA +GTGKT+ L V Q
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHV 154
+ ++ Q LI++PTRELA Q + +G ++ ++A A GG+++ IR L GV V
Sbjct: 64 IQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 155 VSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISA 214
+ GTPGR+ D I RKT IK+++LDE+DEML GF D I + L Q +L SA
Sbjct: 123 IVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSA 182
Query: 215 TLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
TLP I + KF+ + + E T+ I+Q + + E K + L + ++ Q
Sbjct: 183 TLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETE-KIEGLVSILNSELPIQ 241
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
A++FC TK++VD + E++ + +HGDM Q+ER + F++G T +L+ TDV AR
Sbjct: 242 AIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAAR 301
Query: 335 GLDV 338
GLD+
Sbjct: 302 GLDI 305
>UNIPROTKB|J3QR64 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000581384
Uniprot:J3QR64
Length = 214
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 99/175 (56%), Positives = 135/175 (77%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 40 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 99
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 100 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 159
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+++ L
Sbjct: 160 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL 214
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 123/306 (40%), Positives = 185/306 (60%)
Query: 41 KDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMIALTVCQTVDT 97
K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+ L + V+
Sbjct: 9 KPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEP 67
Query: 98 SSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGVHVVS 156
S R Q L LSPT ELA QT KVI +G F ++ V G + E +K+ +V
Sbjct: 68 SDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKL-ERGQKISE--QIVI 124
Query: 157 GTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLPPDLQVVLISA 214
GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP + Q++L SA
Sbjct: 125 GTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSA 184
Query: 215 TLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
T + + K + DP I +KR+E TL+ IKQ++V + KF LC+LY +TI Q
Sbjct: 185 TFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQ 244
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
A+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +VL+TT+V AR
Sbjct: 245 AMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCAR 304
Query: 335 GLDVQQ 340
G+DV+Q
Sbjct: 305 GIDVEQ 310
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 123/306 (40%), Positives = 185/306 (60%)
Query: 41 KDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMIALTVCQTVDT 97
K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+ L + V+
Sbjct: 17 KPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEP 75
Query: 98 SSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGVHVVS 156
S R Q L LSPT ELA QT KVI +G F ++ V G + E +K+ +V
Sbjct: 76 SDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKL-ERGQKISE--QIVI 132
Query: 157 GTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLPPDLQVVLISA 214
GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP + Q++L SA
Sbjct: 133 GTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSA 192
Query: 215 TLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
T + + K + DP I +KR+E TL+ IKQ++V + KF LC+LY +TI Q
Sbjct: 193 TFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQ 252
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
A+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +VL+TT+V AR
Sbjct: 253 AMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCAR 312
Query: 335 GLDVQQ 340
G+DV+Q
Sbjct: 313 GIDVEQ 318
>UNIPROTKB|F1S758 [details] [associations]
symbol:LOC100523329 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
Length = 379
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 121/308 (39%), Positives = 185/308 (60%)
Query: 41 KDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMIALTVCQTVDT 97
K++LL+GIY GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+ L + V+
Sbjct: 1 KEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNA 59
Query: 98 SSREVQALILSPTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GEDIRKLEHGVHV 154
Q L L+PT ELA QT +V+ +G F +++Q + G + G DI K +
Sbjct: 60 LELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK-----QI 114
Query: 155 VSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRYLPPDLQVVLI 212
+ GTPG V D KRK + I++ VLDE+D M+ ++GF DQ + R LP Q++L
Sbjct: 115 IIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGCQMLLF 174
Query: 213 SATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI 272
SAT + + + + DP I ++++ELTL I+Q++V + K+ LC++Y +TI
Sbjct: 175 SATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITI 234
Query: 273 TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVW 332
QA+IFC T+R WLT +M VS + G++ +R AI+ FR G +VLITT+V
Sbjct: 235 GQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRAAIIQRFRDGKEKVLITTNVC 294
Query: 333 ARGLDVQQ 340
ARG+DV+Q
Sbjct: 295 ARGIDVKQ 302
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 112/307 (36%), Positives = 177/307 (57%)
Query: 33 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC 92
T F+ +K +LL GI++ GFE+PS IQ+ ++ + GRD++A+A++GTGKT+ +
Sbjct: 44 TEFEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSL 103
Query: 93 QTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGV 152
+ VDT ++Q LIL PTRELA QT +V +G +N++ GG ++ +DI +L V
Sbjct: 104 EKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTV 163
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLI 212
H+V GTPGRV D+ + V+DE+D++LS F I + Y P + Q+ L
Sbjct: 164 HIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLY 223
Query: 213 SATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI 272
SAT P + K + P +I + DELTL G+ Q++ V+ E K L L+ L I
Sbjct: 224 SATFPLIVKNFMDKHLNKPYEINLM-DELTLRGVTQYYAFVD-ESQKVHCLNTLFSKLQI 281
Query: 273 TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVW 332
Q++IFCN+ +V+ L +K+ ++ H M Q R+ + FR+G R L+ +D+
Sbjct: 282 NQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLL 341
Query: 333 ARGLDVQ 339
RG+D+Q
Sbjct: 342 TRGIDIQ 348
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 109/318 (34%), Positives = 190/318 (59%)
Query: 23 FETTEGVEAI-TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGT 81
F+TT+ + F+ +K +LL GI++ G+E+PS IQ+ A+ + G+DV+A+A++GT
Sbjct: 47 FKTTDVTDTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGT 106
Query: 82 GKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSV 141
GKT + V + +D + +QAL++ PTRELA QT ++ + + ++I+ GG +
Sbjct: 107 GKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTIL 166
Query: 142 GEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 201
+DI ++ V ++ TPGR+ D++ +K ++LVLDE+D++LS F+ + V
Sbjct: 167 KDDILRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVIL 226
Query: 202 YLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFD 261
LP D Q++L SAT P + K + +P +I + +ELTL+G+ Q++ V+ E K
Sbjct: 227 KLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLM-EELTLKGVTQYYAFVQ-ERQKVH 284
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L L+ L I Q++IFCN+ ++V+ L +K+ + +H M Q R+ + +FR G
Sbjct: 285 CLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQG 344
Query: 322 TTRVLITTDVWARGLDVQ 339
R L+ +D++ RG+DVQ
Sbjct: 345 LCRNLVCSDLFTRGIDVQ 362
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 112/308 (36%), Positives = 177/308 (57%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F +G+ ++LLR + + G+EKP+ IQ ++ P++ G+D++ QAQ+GTGKT AL +
Sbjct: 7 TFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLN 66
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV 152
V TS Q L+L+PTRELA Q + + F+ N GG+S+ + + L+ G
Sbjct: 67 KV-TSQTTPQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGP 125
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLI 212
V+ GTPGRV D ++R TL+ ++ LVLDE+DEML GF D I + + PP Q+ L
Sbjct: 126 QVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTPPQRQLALF 185
Query: 213 SATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI 272
SAT+P +I + K + + I + T++ I+Q FV V + K + L + +
Sbjct: 186 SATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHN-KLEALVRVLEVENT 244
Query: 273 TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVW 332
+IF T+ L EK+ + S +HGDM Q+ R+ + + ++G +LI TDV
Sbjct: 245 EGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDVA 304
Query: 333 ARGLDVQQ 340
ARGLDV++
Sbjct: 305 ARGLDVER 312
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 109/314 (34%), Positives = 190/314 (60%)
Query: 26 TEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTS 85
T+GVE F+ + DLL GI++ G+EKPS IQ+ ++ + G+D++A+A++GTGKT
Sbjct: 40 TKGVE----FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTG 95
Query: 86 MIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDI 145
+ V + + + + +QA+++ PTRELA QT ++ + + I ++ GG + +DI
Sbjct: 96 AYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDI 155
Query: 146 RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP 205
+L VH+V TPGR+ D++++ + K LVLDE+D++LS+ F+ + + +LP
Sbjct: 156 MRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPK 215
Query: 206 DLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 265
+ QV+L SAT P+ + K M P +I + +ELTL G+ Q++ V+ E+ K L
Sbjct: 216 ERQVMLYSATFPNTVTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFVQ-EKQKVHCLNT 273
Query: 266 LYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRV 325
L+ L I Q++IFCN+ ++V+ L +K+ ++ +H M Q R+ + +FR G R
Sbjct: 274 LFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRN 333
Query: 326 LITTDVWARGLDVQ 339
L+ +D+ RG+D+Q
Sbjct: 334 LVCSDLLTRGIDIQ 347
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 109/314 (34%), Positives = 190/314 (60%)
Query: 26 TEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTS 85
T+GVE F+ + DLL GI++ G+EKPS IQ+ ++ + G+D++A+A++GTGKT
Sbjct: 40 TKGVE----FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTG 95
Query: 86 MIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDI 145
+ V + + + + +QA+++ PTRELA QT ++ + + I ++ GG + +DI
Sbjct: 96 AYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDI 155
Query: 146 RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP 205
+L VH+V TPGR+ D++++ + K LVLDE+D++LS+ F+ + + +LP
Sbjct: 156 MRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPK 215
Query: 206 DLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 265
+ QV+L SAT P+ + K M P +I + +ELTL G+ Q++ V+ E+ K L
Sbjct: 216 ERQVMLYSATFPNTVTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFVQ-EKQKVHCLNT 273
Query: 266 LYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRV 325
L+ L I Q++IFCN+ ++V+ L +K+ ++ +H M Q R+ + +FR G R
Sbjct: 274 LFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRN 333
Query: 326 LITTDVWARGLDVQ 339
L+ +D+ RG+D+Q
Sbjct: 334 LVCSDLLTRGIDIQ 347
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 104/306 (33%), Positives = 188/306 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA+++ PTRELA Q ++ + + + + A GG ++ +DI +L+ VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV TPGR+ D+IK+ + ++++VLDE+D++LS+ F + D+ LP + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 335
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 396 RGIDIQ 401
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 106/306 (34%), Positives = 189/306 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 97 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 156
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA+++ PTRELA Q ++ + + + + A GG ++ +DI +L+ VH
Sbjct: 157 LDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 216
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV TPGR+ D+IK+ + I+++VLDE+D++LS+ F + D+ LP + Q++L S
Sbjct: 217 VVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFMQIMEDIIMTLPKNRQILLYS 276
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + T + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 277 ATFPLSVQKFMTLHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 334
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 335 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 394
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 395 RGIDIQ 400
>ASPGD|ASPL0000065093 [details] [associations]
symbol:AN7659 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0000822 "inositol hexakisphosphate binding" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 EMBL:BN001304 EMBL:AACD01000130 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_680928.1 ProteinModelPortal:Q5AVM1
EnsemblFungi:CADANIAT00000783 GeneID:2869488 KEGG:ani:AN7659.2
OMA:PQAICLA OrthoDB:EOG4B2X5R Uniprot:Q5AVM1
Length = 477
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 125/318 (39%), Positives = 189/318 (59%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ +F+ +G+ +L+G+ F KPS IQ+RA +P++ G ++++ Q+QSGTGKT+
Sbjct: 67 SVKNFEDLGLDPRILQGLSAMNFRKPSKIQERA-LPLLMGNPPKNLVGQSQSGTGKTAAF 125
Query: 88 ALTVCQTVDTSSREVQ----ALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGE 143
L + +D SS + Q ALIL+PTRELA Q VI +G F++ H G +V
Sbjct: 126 VLNILSRLDLSSEQAQKTPQALILAPTRELARQIVGVIQVMGKFLD-GLHI---GTAVPA 181
Query: 144 DI--RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVY 200
D R VV GTPG V DMIK++ + +K++VLDE+D ML + G DQ V
Sbjct: 182 DTNARPTRMEASVVVGTPGTVMDMIKKRIMVAAKLKVIVLDEADNMLDQQGLGDQCIRVK 241
Query: 201 RYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKF 260
LP D+QVVL SAT P + + +KF ++ ++ +ELT+EGIKQ ++ EE K+
Sbjct: 242 ALLPRDIQVVLFSATFPAHVHQYASKFAPAANELTLQHEELTVEGIKQLYLDCASEEDKY 301
Query: 261 DTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRS 320
TL LY LT+ ++IF T+ + +M TV+S+ G + +RD I+ +FR+
Sbjct: 302 RTLVQLYGLLTVGSSIIFVKTRASAVEIERRMVAEGHTVASLTGGIEGSQRDQIIDQFRA 361
Query: 321 GTTRVLITTDVWARGLDV 338
G +VLITT+V ARG+DV
Sbjct: 362 GHAKVLITTNVLARGIDV 379
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 104/306 (33%), Positives = 188/306 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA+++ PTRELA Q ++ + + + + A GG ++ +DI +L+ VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV TPGR+ D+IK+ + ++++VLDE+D++LS+ F + D+ LP + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 335
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 396 RGIDIQ 401
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 104/306 (33%), Positives = 188/306 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA+++ PTRELA Q ++ + + + + A GG ++ +DI +L+ VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV TPGR+ D+IK+ + ++++VLDE+D++LS+ F + D+ LP + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 335
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 396 RGIDIQ 401
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 104/306 (33%), Positives = 188/306 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA+++ PTRELA Q ++ + + + + A GG ++ +DI +L+ VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV TPGR+ D+IK+ + ++++VLDE+D++LS+ F + D+ LP + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 335
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 396 RGIDIQ 401
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 104/306 (33%), Positives = 188/306 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA+++ PTRELA Q ++ + + + + A GG ++ +DI +L+ VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV TPGR+ D+IK+ + ++++VLDE+D++LS+ F + D+ LP + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 335
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 396 RGIDIQ 401
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 104/306 (33%), Positives = 188/306 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA+++ PTRELA Q ++ + + + + A GG ++ +DI +L+ VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV TPGR+ D+IK+ + ++++VLDE+D++LS+ F + D+ LP + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 335
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 396 RGIDIQ 401
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 104/306 (33%), Positives = 188/306 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA+++ PTRELA Q ++ + + + + A GG ++ +DI +L+ VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV TPGR+ D+IK+ + ++++VLDE+D++LS+ F + D+ LP + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 335
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 396 RGIDIQ 401
>ZFIN|ZDB-GENE-020419-30 [details] [associations]
symbol:ddx19 "DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 19 (DBP5 homolog, yeast)" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-020419-30 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
HSSP:P10081 EMBL:AY099536 IPI:IPI00481107 RefSeq:NP_775365.1
UniGene:Dr.116877 ProteinModelPortal:Q8JGR1 SMR:Q8JGR1
STRING:Q8JGR1 GeneID:192339 KEGG:dre:192339 CTD:192339
InParanoid:Q8JGR1 NextBio:20797174 ArrayExpress:Q8JGR1
Uniprot:Q8JGR1
Length = 487
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 119/316 (37%), Positives = 191/316 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QS TGKT+
Sbjct: 98 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQETA-LPMMLAEPPQNLIAQSQSRTGKTAAF 156
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGD-FINIQAHACVGGKSVGEDIR 146
L + VDT ++ + L + PT ELA QT KVI +G + +Q + G + E
Sbjct: 157 VLAMLSHVDTENKWPECLCVCPTYELALQTGKVIEQMGKHYPEVQLVYAIRGNKL-ERGA 215
Query: 147 KLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
KL+ +V GTPG V D ++ K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 216 KLQE--QIVIGTPGTVLDWCQKLKFIDPKKIKVFVLDEADVMIATQGHQDQSVRIQRMLP 273
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
Q++L SAT + + + DP I +KR+E TL+ IKQ++V +E KF LC
Sbjct: 274 KTCQMLLFSATFEETVWNFAKRIVPDPNIIKLKREEETLDTIKQYYVICNSKEEKFQALC 333
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
++Y +TI QA+IFC+T++ WL ++ V+ + G+M ++R A++ FR G +
Sbjct: 334 NIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEK 393
Query: 325 VLITTDVWARGLDVQQ 340
VL+TT+V ARG+DV+Q
Sbjct: 394 VLVTTNVCARGIDVEQ 409
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 103/306 (33%), Positives = 188/306 (61%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 95 VDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGVH 153
+D +QA+++ PTRELA Q ++ + + + + A GG ++ +DI +L+ VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV TPGR+ D+IK+ + ++++VLDE++++LS+ F + D+ LP + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVEHVQMIVLDEANKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT P + + + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQIN 335
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 334 RGLDVQ 339
RG+D+Q
Sbjct: 396 RGIDIQ 401
>UNIPROTKB|H9KYU4 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 OMA:WHFAERI EMBL:AADN02053079
Ensembl:ENSGALT00000000632 Uniprot:H9KYU4
Length = 416
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 122/316 (38%), Positives = 185/316 (58%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
+I +F+ + +K +LL+G+Y GF +PS IQ A +PI+ +++IAQ+QSGTGKT+
Sbjct: 28 SIRTFEELHLKKELLQGVYTMGFNRPSKIQANA-LPILMAHPPQNLIAQSQSGTGKTAAF 86
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIR 146
L + V + R Q L L+PT ELA Q V +G F N I+ V G V
Sbjct: 87 VLAMLSRVKGAERYPQCLCLAPTYELALQIGHVAEKMGRFCNDIRVTYAVQGNRVSPGT- 145
Query: 147 KLEHGVHVVSGTPGRVCDM-IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRYLP 204
LE +V GTPG + D KR+ L R I + VLDE+D M+ ++GF Q + R LP
Sbjct: 146 VLEE--QIVIGTPGTMLDWCFKRRLLNMRRICMFVLDEADVMIDTQGFSSQSIRIQRALP 203
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
D Q++L SAT + + + ++ P+ I ++++ELTL I+Q++ E K++ LC
Sbjct: 204 KDCQMLLFSATFKETLWKFALQIVSRPIIIKLRQEELTLTNIRQYYFVCRNWEQKYEALC 263
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+LY ++TI QA+IFC T+R DWL+ KM V+ + ++ +R ++ FR G +
Sbjct: 264 NLYGSITIGQAMIFCQTRRSADWLSVKMIQDGHQVAMLTAELSIVQRADVIQRFRDGKEK 323
Query: 325 VLITTDVWARGLDVQQ 340
VLITT+V ARG+DV Q
Sbjct: 324 VLITTNVCARGIDVAQ 339
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 116/310 (37%), Positives = 184/310 (59%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+ +F +GI + + + G + + IQ++A+ I+ G+D+I QA++GTGKT L +
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 92 CQTVDTSSREVQALILSPTRELATQ--TE-KVILAIGDFINIQAHACVGGKSVGEDIRKL 148
+ +D S +VQALI++PTRELA Q TE K +L + IN+ A GG+ V + +RKL
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLA--IYGGQDVAQQLRKL 121
Query: 149 EHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
+ H+V TPGR+ D I+R+T+ + +VLDE+D+ML GF I D+ P Q
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQ 181
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
+L SAT+P +I ++ ++M +P I V+ +E+T++ I+Q + + K D L + D
Sbjct: 182 TMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETT-DRAKPDALRFVMD 240
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
AVIFC TK + L + ++G + + +HGD+PQ +R+ +M FR + LI
Sbjct: 241 RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA 300
Query: 329 TDVWARGLDV 338
TDV ARGLDV
Sbjct: 301 TDVAARGLDV 310
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 116/310 (37%), Positives = 184/310 (59%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+ +F +GI + + + G + + IQ++A+ I+ G+D+I QA++GTGKT L +
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 92 CQTVDTSSREVQALILSPTRELATQ--TE-KVILAIGDFINIQAHACVGGKSVGEDIRKL 148
+ +D S +VQALI++PTRELA Q TE K +L + IN+ A GG+ V + +RKL
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLA--IYGGQDVAQQLRKL 121
Query: 149 EHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
+ H+V TPGR+ D I+R+T+ + +VLDE+D+ML GF I D+ P Q
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQ 181
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
+L SAT+P +I ++ ++M +P I V+ +E+T++ I+Q + + K D L + D
Sbjct: 182 TMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETT-DRAKPDALRFVMD 240
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
AVIFC TK + L + ++G + + +HGD+PQ +R+ +M FR + LI
Sbjct: 241 RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA 300
Query: 329 TDVWARGLDV 338
TDV ARGLDV
Sbjct: 301 TDVAARGLDV 310
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 102/307 (33%), Positives = 187/307 (60%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F+ +K +LL GI++ G+EKPS IQ+ ++ + GRD++A+A++GTGK+ + + +
Sbjct: 99 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 158
Query: 95 VDTSSREVQA-LILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHGV 152
+D +QA +++ PTRELA Q ++ + + + ++ A GG ++ +DI +L+ V
Sbjct: 159 IDLKKDSIQAAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETV 218
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLI 212
HVV TPGR+ D+IK+ + ++++VLDE+D++LS+ F + ++ L Q++L
Sbjct: 219 HVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSSLSKQRQILLY 278
Query: 213 SATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI 272
SAT P + + + P +I + +ELTL+G+ Q++ V E K L L+ L I
Sbjct: 279 SATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVT-ERQKVHCLNTLFSRLQI 336
Query: 273 TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVW 332
Q++IFCN+ ++V+ L +K+ ++ +H M Q+ R+ + +FR+G R L+ TD++
Sbjct: 337 NQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLF 396
Query: 333 ARGLDVQ 339
RG+D+Q
Sbjct: 397 TRGIDIQ 403
>UNIPROTKB|J9NSS1 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063236 CTD:29118 EMBL:AAEX03003382
RefSeq:XP_536532.3 Ensembl:ENSCAFT00000048680 GeneID:479396
KEGG:cfa:479396 Uniprot:J9NSS1
Length = 369
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 115/297 (38%), Positives = 179/297 (60%)
Query: 52 GFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILS 108
GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+ L + V+T Q L L+
Sbjct: 2 GFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNTLELFPQCLCLA 60
Query: 109 PTRELATQTEKVILAIGDF-INIQAHACVGGKSV--GEDIRKLEHGVHVVSGTPGRVCDM 165
PT ELA QT +V+ +G F +++Q + G + G D+ K ++ GTPG V D
Sbjct: 61 PTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTK-----QIIIGTPGTVLDW 115
Query: 166 -IKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEM 223
KRK + I++ VLDE+D M+ ++GF DQ + R LP + Q++L SAT + +
Sbjct: 116 CFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFSATFEDSVWQF 175
Query: 224 TTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKR 283
+ + DP I ++++ELTL I+Q++V E + K+ LC++Y +TI QA+IFC T+R
Sbjct: 176 AERIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRR 235
Query: 284 KVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ 340
WLT +M VS + G++ +R +I+ FR G +VLITT+V ARG+DV+Q
Sbjct: 236 NAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQ 292
>UNIPROTKB|J3QLN6 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000583802
Uniprot:J3QLN6
Length = 163
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 94/163 (57%), Positives = 127/163 (77%)
Query: 38 MGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDT 97
M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+++ Q ++
Sbjct: 1 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 60
Query: 98 SSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVS 156
+ QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+ H++
Sbjct: 61 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 120
Query: 157 GTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
GTPGRV DM+ R+ L + IK+ VLDE+DEMLSRGFKDQIYD+
Sbjct: 121 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDI 163
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 111/321 (34%), Positives = 173/321 (53%)
Query: 21 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSG 80
M F + +F + I +LR I G+E P+AIQ + ++ G DV+ AQ+G
Sbjct: 1 MAFPEYSPAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTG 60
Query: 81 TGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGK 139
TGKT+ A+ + +D +S+ QAL+L PTRELA Q + G +++ + GG
Sbjct: 61 TGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGS 120
Query: 140 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
S + L G VV GTPGR+ D ++R TL + LVLDE+DEML+ GF D + +
Sbjct: 121 SYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERI 180
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
P QV L SAT+P I +++ K++ DP ++ K E I Q ++ V R K
Sbjct: 181 LSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR---K 237
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
D L + + ++F TK+ + + EK+R F+ +++ GD+PQ +R+ + R
Sbjct: 238 MDALTRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALR 297
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
G +L+ TDV ARGLDV++
Sbjct: 298 DGDIDILVATDVAARGLDVER 318
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 109/317 (34%), Positives = 180/317 (56%)
Query: 25 TTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKT 84
+T + +F ++ +K DL++ + G+E+ + IQ + + ++KG+DVI +A++G+GKT
Sbjct: 2 STNTTTSSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKT 61
Query: 85 SMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGE 143
+ L + ++ +Q++++ PTRELA Q K + + I NI+ GG G
Sbjct: 62 AAFGLALLNKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGP 121
Query: 144 DIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
I LEHG HV+ GTPGR+ + + + TL+ + LLVLDE+D ML GF+ + ++
Sbjct: 122 QIGSLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRT 181
Query: 204 PPDLQVVLISATLPHEILEMTTKFMTDPV--KILVKRDELTLEGIKQFFVAVEREEWKFD 261
P D Q +L SAT P +I ++ MTDPV KI D+ T I Q F V ++ + D
Sbjct: 182 PLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQST---ISQKFFKVGNDDDRLD 238
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L L + IFCNTK++ + + + F+V ++HGD+ Q++RD + F +
Sbjct: 239 ALRLLLLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANK 298
Query: 322 TTRVLITTDVWARGLDV 338
+ +L+ TDV ARGLD+
Sbjct: 299 SASILVATDVAARGLDI 315
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 109/317 (34%), Positives = 180/317 (56%)
Query: 25 TTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKT 84
+T + +F ++ +K DL++ + G+E+ + IQ + + ++KG+DVI +A++G+GKT
Sbjct: 2 STNTTTSSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKT 61
Query: 85 SMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGE 143
+ L + ++ +Q++++ PTRELA Q K + + I NI+ GG G
Sbjct: 62 AAFGLALLNKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGP 121
Query: 144 DIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
I LEHG HV+ GTPGR+ + + + TL+ + LLVLDE+D ML GF+ + ++
Sbjct: 122 QIGSLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRT 181
Query: 204 PPDLQVVLISATLPHEILEMTTKFMTDPV--KILVKRDELTLEGIKQFFVAVEREEWKFD 261
P D Q +L SAT P +I ++ MTDPV KI D+ T I Q F V ++ + D
Sbjct: 182 PLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQST---ISQKFFKVGNDDDRLD 238
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L L + IFCNTK++ + + + F+V ++HGD+ Q++RD + F +
Sbjct: 239 ALRLLLLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANK 298
Query: 322 TTRVLITTDVWARGLDV 338
+ +L+ TDV ARGLD+
Sbjct: 299 SASILVATDVAARGLDI 315
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/305 (34%), Positives = 170/305 (55%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF + ++ R + G+E P+ +Q + ++ +D++ ++Q+G+GKT+ + +C+
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVH 153
V+ + QAL+L+PTRELA Q ++ I IG F I+A A G +L+ H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
+V GTPGRV D I++ TL +K LV+DE+DEML+ GF DQ+ + LP +L S
Sbjct: 125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFS 184
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
ATLP ++ ++ +M P I +K +T + I+ V REE K L D+
Sbjct: 185 ATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEV-REEEKLSLLKDVTTIENPD 243
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
+IFC T+ VD + ++ N+ +HG M Q++R +M +FR G R L+ TDV A
Sbjct: 244 SCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAA 303
Query: 334 RGLDV 338
RG+D+
Sbjct: 304 RGIDI 308
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 106/305 (34%), Positives = 170/305 (55%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF + ++ R + G+E P+ +Q + ++ +D++ ++Q+G+GKT+ + +C+
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVH 153
V+ + QAL+L+PTRELA Q ++ I IG F I+A A G +L+ H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
+V GTPGRV D I++ TL +K LV+DE+DEML+ GF DQ+ + LP +L S
Sbjct: 125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFS 184
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
ATLP ++ ++ +M P I +K +T + I+ V REE K L D+
Sbjct: 185 ATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEV-REEEKLSLLKDVTTIENPD 243
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
+IFC T+ VD + ++ N+ +HG M Q++R +M +FR G R L+ TDV A
Sbjct: 244 SCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAA 303
Query: 334 RGLDV 338
RG+D+
Sbjct: 304 RGIDI 308
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 113/309 (36%), Positives = 178/309 (57%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F ++ +K +LR + G+ + + IQ ++ I+ G+DVIA+A++G+GKT+ + +
Sbjct: 5 AFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLS 64
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV 152
+D S VQAL+L PTRELA Q K + + F NI+ GG G + LEHG
Sbjct: 65 RLDALSFRVQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGA 124
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLI 212
HVV GTPGR+ D ++R +L A++ LVLDE+D ML GF+D I + PP Q +L
Sbjct: 125 HVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLF 184
Query: 213 SATLPHEILEMTTKFMTDPVKILVKRDELTLEG-IKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT P I M+ +PV++ V DE+ EG I+Q F V+ + + + + +
Sbjct: 185 SATYPDSIAAMSAGVQREPVEVSV--DEVHGEGAIEQVFYEVDSGQ-RIEAVERILGHYR 241
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A+IFCNTK + + + + ++HGD+ Q+ERD ++ F + + VL+ TDV
Sbjct: 242 PESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDV 301
Query: 332 WARGLDVQQ 340
ARGLD+++
Sbjct: 302 AARGLDIKE 310
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 113/306 (36%), Positives = 171/306 (55%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF A+ +K +LL + GF + IQ +++ I+KG+DVI Q ++G+GKT+ L V
Sbjct: 5 SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV 152
++ VQAL+L PTRELA Q I +G I NI+ GG +G I LEHG
Sbjct: 65 NLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGA 124
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLI 212
H++ GTPGR+ D + + + + LVLDE+D ML GF++ + + P + Q +L
Sbjct: 125 HILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLLF 184
Query: 213 SATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI 272
SAT P I ++ + + I V+ T I+Q+F VE + + L L
Sbjct: 185 SATYPASIEQIAQSVTRNALMIKVEATHDT-SSIRQYFYKVEGSAARDEALETLLLHHQP 243
Query: 273 TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVW 332
T +V+FCNTKR+V + + + F+V +HGDM Q+ERD + +F + + +L+ TDV
Sbjct: 244 TSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVA 303
Query: 333 ARGLDV 338
ARGLDV
Sbjct: 304 ARGLDV 309
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 107/308 (34%), Positives = 174/308 (56%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F + +K +LL + G+ + + IQ +++ I+ G DVI Q ++G+GKT+ L +
Sbjct: 2 AFSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLN 61
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV 152
+D +Q L+L PTRELA Q + I + I N++ GG +G I LEHG
Sbjct: 62 KLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGA 121
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLI 212
H++ GTPGR+ D + R L + +LVLDE+D ML GF+ Q+ + P + Q +L
Sbjct: 122 HIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLF 181
Query: 213 SATLPHEILEMTTKFMTDPV--KILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 270
SAT P +I + + M +PV K V ++ T+E Q F ++ ++ + L L
Sbjct: 182 SATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE---QHFYQLDDDKSRMQALQLLLLEH 238
Query: 271 TITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTD 330
AV+FCNTKR+ + +++ G F+V ++HGD+ Q++RD + +F + + VL+ TD
Sbjct: 239 KPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATD 298
Query: 331 VWARGLDV 338
V ARGLD+
Sbjct: 299 VAARGLDI 306
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 107/308 (34%), Positives = 174/308 (56%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F + +K +LL + G+ + + IQ +++ I+ G DVI Q ++G+GKT+ L +
Sbjct: 2 AFSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLN 61
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV 152
+D +Q L+L PTRELA Q + I + I N++ GG +G I LEHG
Sbjct: 62 KLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGA 121
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLI 212
H++ GTPGR+ D + R L + +LVLDE+D ML GF+ Q+ + P + Q +L
Sbjct: 122 HIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLF 181
Query: 213 SATLPHEILEMTTKFMTDPV--KILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 270
SAT P +I + + M +PV K V ++ T+E Q F ++ ++ + L L
Sbjct: 182 SATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE---QHFYQLDDDKSRMQALQLLLLEH 238
Query: 271 TITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTD 330
AV+FCNTKR+ + +++ G F+V ++HGD+ Q++RD + +F + + VL+ TD
Sbjct: 239 KPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATD 298
Query: 331 VWARGLDV 338
V ARGLD+
Sbjct: 299 VAARGLDI 306
>DICTYBASE|DDB_G0281553 [details] [associations]
symbol:helC "DEAD-box RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281553 GO:GO:0007275
GO:GO:0005524 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
OMA:PQAICLA HSSP:Q9UHL0 EMBL:AF002677 RefSeq:XP_640633.1
ProteinModelPortal:Q54TF8 EnsemblProtists:DDB0215338 GeneID:8623244
KEGG:ddi:DDB_G0281553 Uniprot:Q54TF8
Length = 465
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 113/314 (35%), Positives = 191/314 (60%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG-RDVIAQAQSGTGKTSMIAL 89
++ +F+ +G+K +LL+G+Y G+ KPS IQ+ A+ II+ ++IAQ+QSGTGKT+ L
Sbjct: 68 SVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTL 127
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
+ VD S QA+ +SPT+ELA QT +VI IG F NI+ + V +++
Sbjct: 128 GMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVPKNVTN-- 185
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLPPDLQ 208
V+ GTPG++ + + +K L + +K++VLDE+D ++ + +QI + R LP +++
Sbjct: 186 ---QVIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVK 242
Query: 209 VVLISATLPHEILEMTTKFMTDP-VKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
V L SAT + E+ K + DP I +KR EL++E I Q+F+ E+ K L D+Y
Sbjct: 243 VCLFSATFSMGVEELIKKIVQDPYTSIRLKRQELSVEKIHQYFIDCGSEDNKALILSDIY 302
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHG-DMPQKERDAIMGEFRSGTTRVL 326
+++ Q+++F +T + +KM +VS ++G D+ +ER + +F+ G ++VL
Sbjct: 303 GFISVGQSIVFVHTIATAKSVHQKMVDEGHSVSLLYGKDLTTEERFKQIKDFKDGKSKVL 362
Query: 327 ITTDVWARGLDVQQ 340
ITT+V ARG+D+ Q
Sbjct: 363 ITTNVLARGIDIPQ 376
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 106/316 (33%), Positives = 179/316 (56%)
Query: 24 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGK 83
ET EA+ +F ++G+ ++LL + GF + IQ + P++ G+DV+ +AQ+GTGK
Sbjct: 7 ETVTEPEAV-AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGK 65
Query: 84 TSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVG 142
T+ L +DTS ++ Q ++L+PTRELA Q + I + G D ++ GG+S G
Sbjct: 66 TAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYG 125
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
++LE G VV GTPGR+ D ++RK+L+ +++ VLDE+DEML+ GF + I + +
Sbjct: 126 PQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDH 185
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
+P Q+ L SAT+P I ++ +F+ DP I V + I Q+ V K
Sbjct: 186 IPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGIT-KMTA 244
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
L + + + +IF T+ + EK+ + +++GD+ Q +R+ + + +SG
Sbjct: 245 LERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGK 304
Query: 323 TRVLITTDVWARGLDV 338
+ +L+ TDV ARGLD+
Sbjct: 305 SSILVATDVVARGLDI 320
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 106/312 (33%), Positives = 173/312 (55%)
Query: 33 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC 92
T F +G+ + LL+ + G+E PS IQ +A+ +I GRDV+A AQ+GTGKT+ L +
Sbjct: 6 TKFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLL 65
Query: 93 QTVDTS------SREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIR 146
Q + +S S V+ALIL+PTRELA Q + I G ++N+ + GG + I
Sbjct: 66 QRLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIA 125
Query: 147 KLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPD 206
+L GV V+ TPGR+ D+ ++ ++ +++ +LDE+D ML GF I + LP D
Sbjct: 126 RLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKD 185
Query: 207 LQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 266
Q +L SAT EI + + +P++I V + T E + Q+ AV+++ K L L
Sbjct: 186 RQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKR-KPAVLTHL 244
Query: 267 YDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVL 326
Q ++F TK + LT+ + T +++HG+ Q R + F+ G+ ++L
Sbjct: 245 IKENNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKIL 304
Query: 327 ITTDVWARGLDV 338
+ TD+ ARG+D+
Sbjct: 305 VATDIAARGIDI 316
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 102/310 (32%), Positives = 170/310 (54%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
+ I F A+ + +++ + G+E+PSAIQQ+++ I+ G D+I QAQ+GTGKT+ AL
Sbjct: 3 QEIGGFAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFAL 62
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKL 148
+ +D S RE QALIL+PTRELA Q + + A GG +G ++ +
Sbjct: 63 PILHRIDPSKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAI 122
Query: 149 EHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
+G +V TPGR+CD ++R + LVLDE+DEML GF D + +++ +P Q
Sbjct: 123 RNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQ 182
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
VL SATLP I + + + DP + ++ T+ I+Q + V ++ K + L +
Sbjct: 183 TVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQ-KTSAVLSLLE 241
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
++F TK+ L + + ++++GD+ Q +R+ ++ + G +++
Sbjct: 242 VEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVA 301
Query: 329 TDVWARGLDV 338
TDV ARGLDV
Sbjct: 302 TDVAARGLDV 311
>UNIPROTKB|I3L0H8 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:25628 EMBL:AC012184 ProteinModelPortal:I3L0H8 SMR:I3L0H8
PRIDE:I3L0H8 Ensembl:ENST00000417604 Bgee:I3L0H8 Uniprot:I3L0H8
Length = 447
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 110/273 (40%), Positives = 165/273 (60%)
Query: 71 RDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-N 129
+++IAQ+QSGTGKT+ L + V+ S R Q L LSPT ELA QT KVI +G F
Sbjct: 100 QNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPE 159
Query: 130 IQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEML 188
++ V G + E +K+ +V GTPG V D K K + + IK+ VLDE+D M+
Sbjct: 160 LKLAYAVRGNKL-ERGQKISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMI 216
Query: 189 S-RGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIK 247
+ +G +DQ + R LP + Q++L SAT + + K + DP I +KR+E TL+ IK
Sbjct: 217 ATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIK 276
Query: 248 QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMP 307
Q++V + KF LC+LY +TI QA+IFC+T++ WL ++ V+ + G+M
Sbjct: 277 QYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMM 336
Query: 308 QKERDAIMGEFRSGTTRVLITTDVWARGLDVQQ 340
++R A++ FR G +VL+TT+V ARG+DV+Q
Sbjct: 337 VEQRAAVIERFREGKEKVLVTTNVCARGIDVEQ 369
>UNIPROTKB|J3KS25 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000585024
Uniprot:J3KS25
Length = 188
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 90/162 (55%), Positives = 123/162 (75%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+ A+
Sbjct: 27 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAI 86
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
++ Q ++ + QAL+L+PTRELA Q +KV++A+GD++ HAC+GG +V +++KL+
Sbjct: 87 SILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQ 146
Query: 150 -HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR 190
H++ GTPGRV DM+ R+ L + IK+ VLDE+DEMLSR
Sbjct: 147 MEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR 188
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 107/313 (34%), Positives = 178/313 (56%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SFD++G+ D+LR + + G+ +P+ IQQ+A+ +++GRD++A AQ+GTGKT+ L + Q
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 94 TVDTSS------REVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRK 147
+ T R V+ALIL+PTRELA Q + + ++NI++ GG S+ + K
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 148 LEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDL 207
L GV V+ TPGR+ D+ + ++ +++LVLDE+D ML GF I V LP
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
Q +L SAT +I + K + +P++I V R + + Q V+++ K + L +
Sbjct: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKR-KRELLSHMI 240
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
Q ++F TK + L E++ +++HG+ Q R + +F+SG RVL+
Sbjct: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300
Query: 328 TTDVWARGLDVQQ 340
TD+ ARGLD+++
Sbjct: 301 ATDIAARGLDIEE 313
>UNIPROTKB|Q58DE5 [details] [associations]
symbol:DDX19L "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
UniGene:Bt.49612 HOVERGEN:HBG107989 EMBL:DAAA02045970 EMBL:BT021652
IPI:IPI00694012 SMR:Q58DE5 Ensembl:ENSBTAT00000027604
Uniprot:Q58DE5
Length = 394
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/289 (38%), Positives = 172/289 (59%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKG---RDVIAQAQSGTGKTSMI 87
++ SF+ + +K LL+G+Y GF +PS IQ+ A +P++ +++IAQ+QSGTGKT+
Sbjct: 89 SVKSFEELRLKPQLLQGVYAMGFNRPSKIQENA-LPMMLAEPPQNLIAQSQSGTGKTAAF 147
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L + V+ + R Q L LSPT ELA QT KVI +G F ++ V G + E +
Sbjct: 148 VLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKL-ERGQ 206
Query: 147 KLEHGVHVVSGTPGRVCDMI-KRKTLRTRAIKLLVLDESDEMLS-RGFKDQIYDVYRYLP 204
K+ H+V GTPG V D K K + + IK+ VLDE+D M++ +G +DQ + R LP
Sbjct: 207 KISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP 264
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
+ Q++L SAT + + K + DP I +KR+E TL+ IKQ++V + KF LC
Sbjct: 265 RNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALC 324
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDA 313
++Y +TI QA+IFC+T++ WL ++ V+ + G+M ++R A
Sbjct: 325 NIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAA 373
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 106/305 (34%), Positives = 175/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ N++ GG S+ +D L+ H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ + + K+L + IK +LDE D+ML + + + +++R P + QV++ SATL
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP++I V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H MPQ+ER + +F+ R+L+ T+++ RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 336 LDVQQ 340
+D+++
Sbjct: 351 MDIER 355
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 106/305 (34%), Positives = 175/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ N++ GG S+ +D L+ H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ + + K+L + IK +LDE D+ML + + + +++R P + QV++ SATL
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP++I V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H MPQ+ER + +F+ R+L+ T+++ RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 336 LDVQQ 340
+D+++
Sbjct: 351 MDIER 355
>UNIPROTKB|Q5STU3 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 EMBL:CR942185 IPI:IPI00790636
SMR:Q5STU3 STRING:Q5STU3 Ensembl:ENST00000376177
Ensembl:ENST00000400293 Ensembl:ENST00000430703
Ensembl:ENST00000438578 Ensembl:ENST00000446341
Ensembl:ENST00000450987 Ensembl:ENST00000453488 Uniprot:Q5STU3
Length = 425
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 106/305 (34%), Positives = 175/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ N++ GG S+ +D L+ H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ + + K+L + IK +LDE D+ML + + + +++R P + QV++ SATL
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP++I V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H MPQ+ER + +F+ R+L+ T+++ RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 336 LDVQQ 340
+D+++
Sbjct: 351 MDIER 355
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 106/305 (34%), Positives = 175/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ N++ GG S+ +D L+ H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ + + K+L + IK +LDE D+ML + + + +++R P + QV++ SATL
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP++I V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H MPQ+ER + +F+ R+L+ T+++ RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 336 LDVQQ 340
+D+++
Sbjct: 351 MDIER 355
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 106/305 (34%), Positives = 175/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ N++ GG S+ +D L+ H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ + + K+L + IK +LDE D+ML + + + +++R P + QV++ SATL
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP++I V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H MPQ+ER + +F+ R+L+ T+++ RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 336 LDVQQ 340
+D+++
Sbjct: 351 MDIER 355
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 111/319 (34%), Positives = 180/319 (56%)
Query: 28 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMI 87
G+ + T F +K +LLR I GFE PS +QQ + I G DV+ QA+SG GKT++
Sbjct: 47 GIHS-TGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVF 105
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L+ Q ++ EV L+L TRELA Q + ++ +++ GG ++ +D+
Sbjct: 106 VLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDME 165
Query: 147 KLEH---GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRY 202
+ H+V TPGR+ +++ K L+ ++K VLDE D++L S + I +V+R
Sbjct: 166 AFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRA 225
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFD 261
PP QV++ SATL +EI + KFM +P++I V + +LTL G++Q +V +E E+ K
Sbjct: 226 TPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLE-EKAKNR 284
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
+ DL D+L Q VIF + + + L +R NF +HG +PQ+ER F+
Sbjct: 285 KINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDF 344
Query: 322 TTRVLITTDVWARGLDVQQ 340
R+ + TDV+ RG+D+++
Sbjct: 345 DKRICVATDVFGRGIDIER 363
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 106/305 (34%), Positives = 175/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ N++ GG S+ +D L+ H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ + + K+L + IK +LDE D+ML + + + +++R P + QV++ SATL
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP++I V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H MPQ+ER + +F+ R+L+ T+++ RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 336 LDVQQ 340
+D+++
Sbjct: 351 MDIER 355
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 113/324 (34%), Positives = 182/324 (56%)
Query: 27 EGVE-AITSFDAMGIKD-----DLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSG 80
EGV+ + S + G +D +LLR I GFE PS +Q + I G DV+ QA+SG
Sbjct: 40 EGVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSG 99
Query: 81 TGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGK 139
GKT++ L Q ++ + +V L++ TRELA Q K ++ +++ GG
Sbjct: 100 MGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGL 159
Query: 140 SVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIY 197
S+ +D L+ HVV GTPGR+ + + K+L R IK +LDE D+ML + + +
Sbjct: 160 SIKKDEEVLKKESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQ 219
Query: 198 DVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVERE 256
+++R P + QV++ SATL EI + KFM DP++I V + +LTL G++Q++V ++
Sbjct: 220 EIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDN 279
Query: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMG 316
E K L DL D L Q VIF + ++ L + + NF ++H MPQ ER A
Sbjct: 280 E-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQ 338
Query: 317 EFRSGTTRVLITTDVWARGLDVQQ 340
+F+ R+L+ T+++ RG+D+++
Sbjct: 339 QFKDFQRRILVATNLFGRGMDIER 362
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 113/325 (34%), Positives = 176/325 (54%)
Query: 25 TTEGVEA---ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGT 81
T EG + + SF +G D +L + + GF +P+ IQ + +KGRD+I A++G+
Sbjct: 88 TVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGS 147
Query: 82 GKTSMIALTVCQTVDTSSREVQA-----LILSPTRELATQTEKVILAIGDFINIQAHACV 136
GKT L V+ L+L+PTRELA Q ++ G I+
Sbjct: 148 GKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIY 207
Query: 137 GGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 196
GG G +R L+ GV +V TPGR+ DM++ R + LVLDE+D ML GF QI
Sbjct: 208 GGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQI 267
Query: 197 YDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLE-GIKQFFVAVER 255
+ ++ PD Q + SAT P E+ +++ KF+ +P K+++ +L I+Q V V
Sbjct: 268 RKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQI-VDVIS 326
Query: 256 EEWKFDTLCDLY-DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAI 314
E K++ L L D + ++ ++F +TK+ D +T ++R + S+HGD Q ERD +
Sbjct: 327 ESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWV 386
Query: 315 MGEFRSGTTRVLITTDVWARGLDVQ 339
+ EFRSG + ++ TDV ARGLDV+
Sbjct: 387 LSEFRSGKSPIMTATDVAARGLDVK 411
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 102/311 (32%), Positives = 171/311 (54%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF A+G+ L + + + G++ PS IQ +A+ ++ G+DV+A AQ+GTGKT+ L + +
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 94 TV----DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
+ S + +AL+L+PTRELA Q + + G ++ +++ GG + I KL
Sbjct: 62 LLAKGHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLR 121
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
HGV V+ TPGR+ D++++ ++ +++LVLDE+D ML GF I + LP Q
Sbjct: 122 HGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
++ SAT EI E+ + PV+I V +KQ+ V++ + K L L
Sbjct: 182 LMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQ-KSALLIQLIKQ 240
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
Q ++F TK + L + + + +++HG+ Q R + +F+SG RVL+ T
Sbjct: 241 ENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVAT 300
Query: 330 DVWARGLDVQQ 340
D+ ARGLD+ Q
Sbjct: 301 DIAARGLDIDQ 311
>WB|WBGene00011580 [details] [associations]
symbol:ddx-19 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007281
"germ cell development" evidence=IGI] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0007281
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00530000063236 HSSP:P10081 EMBL:Z50071
InterPro:IPR025574 Pfam:PF13634 UniGene:Cel.7700 GeneID:174418
KEGG:cel:CELE_T07D4.4 CTD:174418 UCSC:T07D4.4b.1 NextBio:883942
PIR:T24663 RefSeq:NP_495891.1 ProteinModelPortal:Q22308 SMR:Q22308
STRING:Q22308 PRIDE:Q22308 EnsemblMetazoa:T07D4.4a
WormBase:T07D4.4a HOGENOM:HOG000016712 InParanoid:Q22308
OMA:HEGGRFG ArrayExpress:Q22308 Uniprot:Q22308
Length = 1022
Score = 483 (175.1 bits), Expect = 5.3e-45, P = 5.3e-45
Identities = 119/321 (37%), Positives = 184/321 (57%)
Query: 31 AITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPII---KGRDVIAQAQSGTGKTSMI 87
+I+SF + +K ++L+ + F+ P+ IQ+ A +P++ ++IAQAQSGTGKT+
Sbjct: 616 SISSFRELRLKPEVLKALDTMNFQFPTRIQETA-LPLLLMEPPSNLIAQAQSGTGKTAAF 674
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACV-GGKSVGEDI 145
LT+ +D + Q + L+PT ELA Q +V+ +G FI N++ H + GG
Sbjct: 675 VLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRG 734
Query: 146 RKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEML-SRGFKD---QIYDVY 200
RKL +V GTPG D +++ K + I+ LVLDE+D M+ +GF D IY++
Sbjct: 735 RKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMV 792
Query: 201 RYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKF 260
+Q +L SAT ++ TK + + + +++KR+E L IKQF+V + K+
Sbjct: 793 EDASDSVQSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKY 852
Query: 261 DTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKER-DAIMGEFR 319
+ +LY L + +VIFC+TK V WL E MR V +HGDM ER D I+ F+
Sbjct: 853 AAIVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTII-HFK 911
Query: 320 SGTTRVLITTDVWARGLDVQQ 340
G +VLITT+V+ARG+DV Q
Sbjct: 912 RGDFKVLITTNVFARGIDVAQ 932
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 106/311 (34%), Positives = 163/311 (52%)
Query: 33 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC 92
T+F G+ +++L+ + + G+ P+ IQ+ A+ I+ G DV AQ+GTGKT+ L +
Sbjct: 4 TTFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMI 63
Query: 93 QTVDTS---SREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
Q + T +R + LIL PTRELA Q + G ++ + +GG S E L+
Sbjct: 64 QRLSTGRARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQ 123
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
GV V+ TPGR+ D R L ++ L++DE+D ML GF I + LP + Q
Sbjct: 124 RGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQT 183
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKF--DTLCDLY 267
+L SAT P +I + F DP KI V R T E I QF V + + K L +
Sbjct: 184 LLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTALRRVI 243
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
+ + ++FCN K +VD + + + + +HGD+PQ R + FR G ++L+
Sbjct: 244 EATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLLV 303
Query: 328 TTDVWARGLDV 338
+DV ARGLD+
Sbjct: 304 ASDVAARGLDI 314
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 105/305 (34%), Positives = 175/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ +++ GG S+ +D L+ H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ + + K+L + IK +LDE D+ML + + + +++R P + QV++ SATL
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP++I V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H MPQ+ER + +F+ R+L+ T+++ RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 336 LDVQQ 340
+D+++
Sbjct: 351 MDIER 355
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 109/319 (34%), Positives = 178/319 (55%)
Query: 28 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMI 87
G+ + T F +K +LLR I GFE PS +QQ + + G D+I QA+SG GKT++
Sbjct: 48 GIHS-TGFRDFLLKPELLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVF 106
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGED-- 144
LT Q V+ + E L++ TRELA Q ++ +I+ GG + +D
Sbjct: 107 VLTTLQQVEPVAGECSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAE 166
Query: 145 -IRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRY 202
++ E H++ GTPGR+ +++ K LR ++++ VLDE D+ML + + + +++R
Sbjct: 167 LLKNKETHPHIIVGTPGRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDMRRDVQEIFRA 226
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFD 261
P QV++ SATL EI + KFM +P + V D +LTL G++Q+FVA+E +E K
Sbjct: 227 TPQQKQVMMFSATLSDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKE-KNR 285
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L +L D L Q +IF + + L + +R NF ++H + Q+ER EF+
Sbjct: 286 KLNELLDDLQFNQVIIFVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEF 345
Query: 322 TTRVLITTDVWARGLDVQQ 340
R+ + TDV+ RG+D+++
Sbjct: 346 NKRICVATDVFGRGIDIER 364
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 105/305 (34%), Positives = 175/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ +++ GG +V +D L+ H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVG 171
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ + + K+L + IK +LDE D+ML + + + +++R P + QV++ SATL
Sbjct: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP++I V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H MPQ+ER + +F+ R+L+ T+++ RG
Sbjct: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
Query: 336 LDVQQ 340
+D+++
Sbjct: 351 MDIER 355
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 103/306 (33%), Positives = 172/306 (56%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF++ ++ G+ G+++P+ IQ +A+ PI++G DVI AQ+GTGKT+ AL V Q
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQ 61
Query: 94 TVDTSSR-EVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGV 152
+ ++ R V+ L+L+PTRELA Q + ++G I+ + GG ++ + IR+L GV
Sbjct: 62 KMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLI 212
VV PGR+ D I R T+ ++ L++DE+D M GF+ I + + L Q +L
Sbjct: 122 DVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 213 SATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTI 272
SAT+P E+ ++T + T+PV I + + + V+ + K L ++ T
Sbjct: 182 SATMPPEVRKLTLETQTNPVTIQIGT-QAPASSVSHSVYPVKNHQ-KTPLLIEILKTTET 239
Query: 273 TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVW 332
+IF TK + L +++ FT +S+ G++ Q R A+M FR G ++L+ TD+
Sbjct: 240 KSVLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILVATDIA 299
Query: 333 ARGLDV 338
ARGLD+
Sbjct: 300 ARGLDI 305
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 102/322 (31%), Positives = 174/322 (54%)
Query: 21 MVFETTEGV---EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQA 77
+V + G+ + F + + +L + + GF P+ IQ A+ +++GRD + +A
Sbjct: 11 LVISSFSGIPMQDTAIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKA 70
Query: 78 QSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACV 136
Q+GTGKT+ +L + ++ S + QA++++PTRELA Q I +G I ++
Sbjct: 71 QTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIY 130
Query: 137 GGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 196
GG S+ + +R L+ G H+V GTPGRV D+I R L +LDE+DEML GF D +
Sbjct: 131 GGASILDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDV 190
Query: 197 YDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE 256
+ P Q VL SAT+P + E+ +F+ +P + V T+ ++Q + V+
Sbjct: 191 TWIMEQAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGV 250
Query: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMG 316
E K + + L +T +++F T++ + L + + F +++HGD+PQ R+ +
Sbjct: 251 E-KDEAMARLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVD 309
Query: 317 EFRSGTTRVLITTDVWARGLDV 338
+ G +L+ TDV ARGLDV
Sbjct: 310 HIKQGVIDILVATDVVARGLDV 331
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 102/322 (31%), Positives = 174/322 (54%)
Query: 21 MVFETTEGV---EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQA 77
+V + G+ + F + + +L + + GF P+ IQ A+ +++GRD + +A
Sbjct: 11 LVISSFSGIPMQDTAIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKA 70
Query: 78 QSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACV 136
Q+GTGKT+ +L + ++ S + QA++++PTRELA Q I +G I ++
Sbjct: 71 QTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIY 130
Query: 137 GGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQI 196
GG S+ + +R L+ G H+V GTPGRV D+I R L +LDE+DEML GF D +
Sbjct: 131 GGASILDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDV 190
Query: 197 YDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE 256
+ P Q VL SAT+P + E+ +F+ +P + V T+ ++Q + V+
Sbjct: 191 TWIMEQAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGV 250
Query: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMG 316
E K + + L +T +++F T++ + L + + F +++HGD+PQ R+ +
Sbjct: 251 E-KDEAMARLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVD 309
Query: 317 EFRSGTTRVLITTDVWARGLDV 338
+ G +L+ TDV ARGLDV
Sbjct: 310 HIKQGVIDILVATDVVARGLDV 331
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 105/306 (34%), Positives = 175/306 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G D++ QA+SG GKT++ L Q ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVD 110
Query: 100 REVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSV--GEDIRKLEHGVHVVS 156
+V L++ TRELA Q K +++ ++ A GG S+ ED+ K ++ H+V
Sbjct: 111 GQVSVLVMCHTRELAFQISKEYERFSKYMSSVKCAAFFGGMSIKKDEDVLK-KNCPHIVV 169
Query: 157 GTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISAT 215
GTPGR+ + + KTL + +K VLDE D+ML + + + D++R P + Q ++ SAT
Sbjct: 170 GTPGRILALSRNKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSAT 229
Query: 216 LPHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
L EI + KFM DP+++ V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 230 LSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQ 288
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
VIF + + L++ + NF ++H M Q+ER + +F+ R+L+ T+++ R
Sbjct: 289 VVIFVKSVPRCVALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGR 348
Query: 335 GLDVQQ 340
G+D+++
Sbjct: 349 GMDIER 354
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 102/305 (33%), Positives = 174/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G D++ QA+SG GKT++ L Q ++ +
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ +++ GG S+ +D L+ HVV G
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKRNCPHVVVG 170
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ +++ ++L R +K VLDE D+ML + + + +++R P + Q ++ SATL
Sbjct: 171 TPGRILALVRNRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP+++ V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 231 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H M Q+ER + +F+ R+L+ T+++ RG
Sbjct: 290 VIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 336 LDVQQ 340
+D+++
Sbjct: 350 MDIER 354
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 107/310 (34%), Positives = 169/310 (54%)
Query: 33 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC 92
T+F+ + + +L + G+ + + IQ +++ I+KG D+IAQA++G+GKT+ + +
Sbjct: 6 TAFNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLL 65
Query: 93 QTVDTSSREVQALILSPTRELATQTEKVI--LAIGDFINIQAHACVGGKSVGEDIRKLEH 150
++ QAL++ PTRELA Q K + LA + NI+ GG S G I LEH
Sbjct: 66 NPINPRYFGCQALVICPTRELADQVAKEVRRLARAED-NIKVLTLCGGVSFGPQIASLEH 124
Query: 151 GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVV 210
G H++ GTPGR+ +++ +L + LVLDE+D ML GF D I D+ P Q +
Sbjct: 125 GAHIIVGTPGRIQQHLRKGSLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQTL 184
Query: 211 LISATLPHEILEMTTKFMTDP--VKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 268
L SAT P I ++ +KFM DP VK D+ +E Q F + EE + + +
Sbjct: 185 LFSATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIE---QRFYEISPEE-RMSAVTKVLH 240
Query: 269 TLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLIT 328
V FC TK++V + + + +HGD+ Q++RD ++ F + +T VL+
Sbjct: 241 HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA 300
Query: 329 TDVWARGLDV 338
TDV ARGLD+
Sbjct: 301 TDVAARGLDI 310
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 104/309 (33%), Positives = 163/309 (52%)
Query: 33 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC 92
T+F +G+K +L + G+EKPS IQ + ++ GRDV+ AQ+G+GKT+ +L +
Sbjct: 6 TTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLL 65
Query: 93 QTVDTSSREVQALILSPTRELATQTEKVILAIGDFIN-IQAHACVGGKSVGEDIRKLEHG 151
Q +D + Q L+L+PTRELA Q + + + + A GG+ +R L G
Sbjct: 66 QNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQG 125
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
+V GTPGR+ D +KR TL + LVLDE+DEML GF + + + +P Q L
Sbjct: 126 PQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTAL 185
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT+P I +T +FM +P ++ ++ T I Q + V K + L +
Sbjct: 186 FSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMR-KNEALVRFLEAED 244
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
A+IF TK + E + + ++++GDM Q R+ + + G +LI TDV
Sbjct: 245 FDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDV 304
Query: 332 WARGLDVQQ 340
ARGLDV++
Sbjct: 305 AARGLDVER 313
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 104/306 (33%), Positives = 176/306 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSV--GEDIRKLEHGVHVVS 156
+V L++ TRELA Q K ++ +++ GG S+ ED+ K ++ HVV
Sbjct: 111 GQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLK-KNCPHVVV 169
Query: 157 GTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISAT 215
GTPGR+ +++ ++L R +K VLDE D+ML + + + +++R P + Q ++ SAT
Sbjct: 170 GTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSAT 229
Query: 216 LPHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
L EI + KFM DP+++ V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 230 LSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQ 288
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
VIF + ++ L + + NF ++H M Q+ER + +F+ R+L+ T+++ R
Sbjct: 289 VVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGR 348
Query: 335 GLDVQQ 340
G+D+++
Sbjct: 349 GMDIER 354
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 104/306 (33%), Positives = 176/306 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPIN 110
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSV--GEDIRKLEHGVHVVS 156
+V L++ TRELA Q K ++ +++ GG S+ ED+ K ++ HVV
Sbjct: 111 GQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLK-KNCPHVVV 169
Query: 157 GTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISAT 215
GTPGR+ +++ ++L R +K VLDE D+ML + + + +++R P + Q ++ SAT
Sbjct: 170 GTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSAT 229
Query: 216 LPHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
L EI + KFM DP+++ V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 230 LSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQ 288
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
VIF + ++ L + + NF ++H M Q+ER + +F+ R+L+ T+++ R
Sbjct: 289 VVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGR 348
Query: 335 GLDVQQ 340
G+D+++
Sbjct: 349 GMDIER 354
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 102/305 (33%), Positives = 172/305 (56%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G D++ QA+SG GKT++ L Q ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVD 110
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ ++ GG S+ +D L+ H+V G
Sbjct: 111 GQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVG 170
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ +++ KTL + +K VLDE D+ML + + + D++R P + Q ++ SATL
Sbjct: 171 TPGRILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATL 230
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP+++ V + +LTL G++Q++ ++ E K L DL D L Q
Sbjct: 231 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDNE-KNRKLFDLLDVLEFNQV 289
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L++ + NF ++H M Q+ER + +F+ R+L+ T+++ RG
Sbjct: 290 VIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 336 LDVQQ 340
+D+++
Sbjct: 350 MDIER 354
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 100/309 (32%), Positives = 172/309 (55%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F + + LL+ I + +++P+ IQ++++ I+ DV+A+AQ+GTGKT+ AL + Q
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 94 ---TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEH 150
+V E++AL+L+PTRELA Q K G F ++ GG S + I +L+
Sbjct: 66 QLISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKV 125
Query: 151 GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVV 210
GV ++ TPGR+ D+++ +++ I+ LV DE+D ML GFK++I + +YLP Q +
Sbjct: 126 GVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTL 185
Query: 211 LISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 270
L SAT +I +M+ + +P + + + ++Q V+ + K + L +
Sbjct: 186 LFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADR-KRELTSFLIGSR 244
Query: 271 TITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTD 330
Q ++F TK+ D L ++M ++HGD Q R+ + EF+ G R LI TD
Sbjct: 245 NWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATD 304
Query: 331 VWARGLDVQ 339
V ARG+D++
Sbjct: 305 VAARGIDIK 313
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 104/313 (33%), Positives = 169/313 (53%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF A+ + L+ + + G+++P+ IQ A+ I+ +DV+A AQ+GTGKT+ AL + Q
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 94 TV------DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRK 147
+ D +++ ++AL+L PTRELA Q ++ + +I+ GG S+
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 148 LEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDL 207
G+ V+ TPGR+ D +++ L + LV DE+D ML GF D+I V + +P
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
Q +L SATL I + + DP +I V + T I+Q A++ + K + + L
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLV 240
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
+ Q +IF TK+ VD LT ++ S HGD+ Q R+ ++ EF+ G +VL+
Sbjct: 241 RSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLV 300
Query: 328 TTDVWARGLDVQQ 340
TDV ARGLD+ +
Sbjct: 301 ATDVAARGLDIAE 313
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 100/309 (32%), Positives = 172/309 (55%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F + + LL+ I + +++P+ IQ++++ I+ DV+A+AQ+GTGKT+ AL + Q
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 94 ---TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEH 150
+V E++AL+L+PTRELA Q K G F ++ GG S + I +L+
Sbjct: 66 QLISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKV 125
Query: 151 GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVV 210
GV ++ TPGR+ D+++ +++ I+ LV DE+D ML GFK++I + +YLP Q +
Sbjct: 126 GVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTL 185
Query: 211 LISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 270
L SAT +I +M+ + +P + + + ++Q V+ + K + L +
Sbjct: 186 LFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADR-KRELTSFLIGSR 244
Query: 271 TITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTD 330
Q ++F TK+ D L ++M ++HGD Q R+ + EF+ G R LI TD
Sbjct: 245 NWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATD 304
Query: 331 VWARGLDVQ 339
V ARG+D++
Sbjct: 305 VAARGIDIK 313
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 104/313 (33%), Positives = 169/313 (53%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF A+ + L+ + + G+++P+ IQ A+ I+ +DV+A AQ+GTGKT+ AL + Q
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 94 TV------DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRK 147
+ D +++ ++AL+L PTRELA Q ++ + +I+ GG S+
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 148 LEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDL 207
G+ V+ TPGR+ D +++ L + LV DE+D ML GF D+I V + +P
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
Q +L SATL I + + DP +I V + T I+Q A++ + K + + L
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLV 240
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
+ Q +IF TK+ VD LT ++ S HGD+ Q R+ ++ EF+ G +VL+
Sbjct: 241 RSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLV 300
Query: 328 TTDVWARGLDVQQ 340
TDV ARGLD+ +
Sbjct: 301 ATDVAARGLDIAE 313
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 114/317 (35%), Positives = 177/317 (55%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPI-IKGRDVIAQAQSGTGKTS--MI- 87
+ SF+A G +LLR + GF P+ IQ ++ PI ++GRD++A A++G+GKT +I
Sbjct: 157 LMSFEATGFPPELLREVLSAGFSAPTPIQAQS-WPIAMQGRDIVAIAKTGSGKTLGYLIP 215
Query: 88 ALTVCQTVDTSSREVQA-LILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIR 146
Q + SR L+LSPTRELATQ ++ + G I GG G +R
Sbjct: 216 GFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLR 275
Query: 147 KLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPD 206
LE G +V TPGR+ D+++ + + R I LVLDE+D ML GF+ QI + + +P
Sbjct: 276 DLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTK 335
Query: 207 LQVVLISATLPHEILEMTTKFMTDPVKILVKR-DELTL-EGIKQFF--VAVEREEWKFDT 262
Q ++ +AT P + ++ + +P ++ + DEL + I Q VA ++ + +
Sbjct: 336 RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQ 395
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
+ L ++ +IFC+TKR D LT + F +++HGD Q ERD ++ +FRSG
Sbjct: 396 I--LRSQEPGSKVIIFCSTKRMCDQLTRNLTR-QFGAAAIHGDKSQPERDNVLNQFRSGR 452
Query: 323 TRVLITTDVWARGLDVQ 339
T VL+ TDV ARGLDV+
Sbjct: 453 TPVLVATDVAARGLDVK 469
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 102/305 (33%), Positives = 174/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ +++ GG S+ +D L+ HVV G
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 170
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ +++ ++L + +K VLDE D+ML + + + +++R P + Q ++ SATL
Sbjct: 171 TPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP+++ V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 231 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H M Q+ER + +F+ R+L+ T+++ RG
Sbjct: 290 VIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 336 LDVQQ 340
+D+++
Sbjct: 350 MDIER 354
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 102/305 (33%), Positives = 174/305 (57%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 99 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 158
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ +++ GG S+ +D L+ HVV G
Sbjct: 159 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 218
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ +++ ++L + +K VLDE D+ML + + + +++R P + Q ++ SATL
Sbjct: 219 TPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 278
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
EI + KFM DP+++ V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 279 SKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 337
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF + ++ L + + NF ++H M Q+ER + +F+ R+L+ T+++ RG
Sbjct: 338 VIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 397
Query: 336 LDVQQ 340
+D+++
Sbjct: 398 MDIER 402
>TAIR|locus:2101993 [details] [associations]
symbol:LOS4 "LOW EXPRESSION OF OSMOTICALLY RESPONSIVE
GENES 4" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0009408 "response to heat"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0009737 GO:GO:0005737 GO:GO:0005635 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009409 GO:GO:0009408 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 EMBL:AL132958 eggNOG:COG0513 HOGENOM:HOG000268797
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GO:GO:0016973 EMBL:AY057548 EMBL:BT002444 EMBL:BT008867
IPI:IPI00533725 PIR:T46157 RefSeq:NP_190879.1 UniGene:At.35224
UniGene:At.675 ProteinModelPortal:Q93ZG7 SMR:Q93ZG7 PaxDb:Q93ZG7
PRIDE:Q93ZG7 EnsemblPlants:AT3G53110.1 GeneID:824477
KEGG:ath:AT3G53110 GeneFarm:1014 TAIR:At3g53110 InParanoid:Q93ZG7
OMA:ESATTFE PhylomeDB:Q93ZG7 ProtClustDB:CLSN2684906
Genevestigator:Q93ZG7 GermOnline:AT3G53110 Uniprot:Q93ZG7
Length = 496
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 117/330 (35%), Positives = 184/330 (55%)
Query: 26 TEGVEAITS---FDAMGIKDDLLRGIY-QYGFEKPSAIQQRAVMPIIKG---RDVIAQAQ 78
T G TS F+ + + +L++G+Y + FEKPS IQ + +P+I + +IAQA
Sbjct: 81 TSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAIS-LPMIMTPPHKHLIAQAH 139
Query: 79 SGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGG 138
+G+GKT+ L + VD + RE QAL + PTRELA Q +V+ +G F I A V
Sbjct: 140 NGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPD 199
Query: 139 KSVGEDI--RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQ 195
+ G R HVV GTPG + + K L +K+LV DE+D ML+ GF+D
Sbjct: 200 STRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDD 259
Query: 196 ----IYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFV 251
+ D+ R + P+ QV+L SAT + + + + DP ++ VKR++L L+ +KQ+ V
Sbjct: 260 SLKIMKDIGR-VNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYKV 318
Query: 252 AVEREEWKFDTLCD-LYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKE 310
+E+ K + + D + + I Q +IF TK + + + + V+S+HG++ + +
Sbjct: 319 VCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESD 378
Query: 311 RDAIMGEFRSGTTRVLITTDVWARGLDVQQ 340
RD I+ EF+ T+VLI TDV ARG D Q+
Sbjct: 379 RDKIVKEFKECLTQVLIATDVIARGFDQQR 408
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 104/310 (33%), Positives = 167/310 (53%)
Query: 32 ITSFDAMGIKDDL-LRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALT 90
+T+F + + L + + G+ + +Q A+ I+ G+DV QA++G+GKT+ L
Sbjct: 1 MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG 60
Query: 91 VCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLE 149
+ Q +D S + QAL+L PTRELA Q + + F+ N + GG+ G L+
Sbjct: 61 LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ 120
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
H H++ TPGR+ D +++ T+ A+ LV+DE+D ML GF D I DV R+ P Q
Sbjct: 121 HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT 180
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
+L SAT P I ++ + DP+ I + + L I+Q F + K L L
Sbjct: 181 LLFSATWPEAIAAISGRVQRDPLAIEIDSTD-ALPPIEQQFYETS-SKGKIPLLQRLLSL 238
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
+ V+FCNTK+ + + + + S+HGD+ Q++RD + F +G+ RVL+ T
Sbjct: 239 HQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVAT 298
Query: 330 DVWARGLDVQ 339
DV ARGLD++
Sbjct: 299 DVAARGLDIK 308
>UNIPROTKB|J3KTN0 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578754
Uniprot:J3KTN0
Length = 117
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 84/115 (73%), Positives = 104/115 (90%)
Query: 178 LLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVK 237
+ VLDE+DEMLSRGFKDQIYD+++ L + QVVL+SAT+P ++LE+T KFM DP++ILVK
Sbjct: 1 MFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVK 60
Query: 238 RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKM 292
++ELTLEGI+QF++ VEREEWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM
Sbjct: 61 KEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKM 115
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 106/315 (33%), Positives = 171/315 (54%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF+ +G+ +LLR I + G+ +P+ +Q++A+ I++ RDV+ AQ+GTGKT+ L + Q
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 94 TVDTSSREVQ--------ALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDI 145
+ S +Q ALIL+PTRELA Q + + A G ++ ++A GG S+ I
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 146 RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP 205
L GV ++ TPGR+ D++ + L ++ VLDE+D ML GF I + + LP
Sbjct: 131 NHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPE 190
Query: 206 DLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 265
Q +L SAT EI E+T K + P I V R I V+R+ K + L
Sbjct: 191 SRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQR-KRELLSF 249
Query: 266 LYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRV 325
+ + Q ++F TK + L++++ + +++HG+ Q R + +F+ G RV
Sbjct: 250 MIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRV 309
Query: 326 LITTDVWARGLDVQQ 340
L+ TDV ARGLD+ +
Sbjct: 310 LVATDVAARGLDIDK 324
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 106/315 (33%), Positives = 171/315 (54%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF+ +G+ +LLR I + G+ +P+ +Q++A+ I++ RDV+ AQ+GTGKT+ L + Q
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 94 TVDTSSREVQ--------ALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDI 145
+ S +Q ALIL+PTRELA Q + + A G ++ ++A GG S+ I
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 146 RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP 205
L GV ++ TPGR+ D++ + L ++ VLDE+D ML GF I + + LP
Sbjct: 131 NHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPE 190
Query: 206 DLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 265
Q +L SAT EI E+T K + P I V R I V+R+ K + L
Sbjct: 191 SRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQR-KRELLSF 249
Query: 266 LYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRV 325
+ + Q ++F TK + L++++ + +++HG+ Q R + +F+ G RV
Sbjct: 250 MIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRV 309
Query: 326 LITTDVWARGLDVQQ 340
L+ TDV ARGLD+ +
Sbjct: 310 LVATDVAARGLDIDK 324
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 470 (170.5 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 117/328 (35%), Positives = 183/328 (55%)
Query: 22 VFETTEGVEA-ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPI-IKGRDVIAQAQS 79
V T E + A +F++ G+ ++LR + GF P+ IQ + PI ++ RD++A A++
Sbjct: 423 VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQT-WPIALQSRDIVAIAKT 481
Query: 80 GTGKT------SMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAH 133
G+GKT + I L C+ + V LIL+PTRELATQ + L G I
Sbjct: 482 GSGKTLGYLIPAFILLRHCRNDSRNGPTV--LILAPTRELATQIQDEALRFGRSSRISCT 539
Query: 134 ACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFK 193
GG G +++LE G +V TPGR+ D+++ K + + + LLVLDE+D ML GF+
Sbjct: 540 CLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFE 599
Query: 194 DQIYDVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKR-DELTL-EGIKQFFV 251
QI + +PP Q ++ +AT P E+ ++ + + +PV++ + R DEL + I Q+
Sbjct: 600 PQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVE 659
Query: 252 AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKER 311
V + E + L ++ +IFC+TKR D L + G +F +HGD Q ER
Sbjct: 660 VVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSV-GRHFGAVVIHGDKTQGER 718
Query: 312 DAIMGEFRSGTTRVLITTDVWARGLDVQ 339
D ++ +FRSG + VLI TDV ARGLD++
Sbjct: 719 DWVLNQFRSGKSCVLIATDVAARGLDIK 746
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 106/314 (33%), Positives = 169/314 (53%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF + + +L I G+ KP+AIQQ+A+ ++ G+D+IA AQ+GTGKT+ L + +
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLE 61
Query: 94 TVDTSSRE---------VQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGED 144
+++ +E ++ALIL PTRELA Q E I +++I + A GG E
Sbjct: 62 QLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQ 121
Query: 145 IRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLP 204
++L GV ++ TPGR+ DM ++ L + +LVLDE+D ML GF D I + LP
Sbjct: 122 KQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLP 181
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
Q +L SAT+ E+ + + + PV+I + D+ + I+Q+ V V++ K L
Sbjct: 182 EHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKAN-KSALLS 240
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+ T QA+IF TK L ++ S+H Q R+ I+ +F+SG +
Sbjct: 241 HIITTQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIK 300
Query: 325 VLITTDVWARGLDV 338
L+ T + ARGLD+
Sbjct: 301 FLVATAIAARGLDI 314
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 102/319 (31%), Positives = 175/319 (54%)
Query: 28 GVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMI 87
G+ + T F +K +L R I GFE PS +QQ + I G DV+ QA+SG GKT++
Sbjct: 58 GIHS-TGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVF 116
Query: 88 ALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR 146
L+ Q +D EV +++ RELA Q L ++ +++ GG + +D
Sbjct: 117 VLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAE 176
Query: 147 KLEH---GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRY 202
L++ H+V TPGR+ +++ K + +K V+DE D++L + + +++R
Sbjct: 177 LLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRA 236
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFD 261
P D QV++ SATL EI + +F+ +P++I V + +LTL G++Q+++ +E E K
Sbjct: 237 TPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEERE-KNR 295
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L L D L Q +IF + + + LT+ + NF ++HG M Q+ER A F+
Sbjct: 296 KLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDF 355
Query: 322 TTRVLITTDVWARGLDVQQ 340
R+ ++TDV+ RG+D+++
Sbjct: 356 EKRICVSTDVFGRGIDIER 374
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 111/312 (35%), Positives = 166/312 (53%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F D++L I + GF +P+ IQ + +KGRD+I A++G+GKT L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 95 VDTSSREVQ-----ALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
V R Q LIL+PTRELA Q ++ G +++ GG G IR L
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
GV +V TPGR+ DM++ + + + LVLDE+D ML GF+ QI + + PD Q
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 346
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTL-EGIKQFFVAVEREEWKFDTLCDLYD 268
+L SAT P E+ + +F+ DP K ++ +L + I Q V E K++ L L
Sbjct: 347 LLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPE-KYNRLLTLLK 405
Query: 269 TLTI-TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
L ++ +IF TKR D +T ++R + ++HGD Q ERD ++ EF+SG + ++
Sbjct: 406 QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMT 465
Query: 328 TTDVWARGLDVQ 339
TDV ARGLDV+
Sbjct: 466 ATDVAARGLDVK 477
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 465 (168.7 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 110/315 (34%), Positives = 176/315 (55%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPI-IKGRDVIAQAQSGTGKTSMIALTVCQ 93
F+ G D ++ I + GF KP+AIQ + PI + GRD++ AQ+G+GKT L
Sbjct: 159 FEEGGFPDYVMNEIRKQGFAKPTAIQAQG-WPIAMSGRDLVGVAQTGSGKTLAYVLPAVV 217
Query: 94 TVDTSSREVQ-----ALILSPTRELATQTEKVILAIGDFINIQAHACV-GGKSVGEDIRK 147
++ R + AL+L+PTRELA Q ++V + G +++ + C+ GG G+ R
Sbjct: 218 HINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVR-NTCIFGGAPKGQQARD 276
Query: 148 LEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDL 207
LE GV +V TPGR+ D ++R T + LVLDE+D ML GF+ QI + + + PD
Sbjct: 277 LERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDR 336
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLE-GIKQFFVAVEREEWKFDTLCDL 266
QV++ SAT P E+ ++ +F+ + +++ + L+ I Q + E K L L
Sbjct: 337 QVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENE-KLMKLIKL 395
Query: 267 YDTLTI---TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTT 323
++ T+ +IF TK++VD +T + + ++HGD Q+ERD ++ FR+G
Sbjct: 396 LTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRH 455
Query: 324 RVLITTDVWARGLDV 338
+L+ TDV ARGLDV
Sbjct: 456 SILVATDVAARGLDV 470
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 103/307 (33%), Positives = 163/307 (53%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F + G + GI G+E P+ IQ +A+ ++ GRDV+ AQ+GTGKT+ AL +
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHR 62
Query: 95 VDTSSR-EVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVH 153
+ R V+AL+++PTRELA Q + +G +++ GG V ++KL+ G
Sbjct: 63 LQQGERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAE 122
Query: 154 VVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLIS 213
VV PGR+ D I + T+ +++LVLDE+D+M GF I V ++LPP Q +L S
Sbjct: 123 VVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLFS 182
Query: 214 ATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 273
AT+P +I + + DPV + V + + VE + K L +L
Sbjct: 183 ATMPIDIRTLAQDILVDPVTVQVGTVAPAVT-VAHALYPVE-QHLKTPLLLELLRHTDTE 240
Query: 274 QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 333
+IF TK + L E++ + +S+ G++ Q R A + FR GT ++L+ TD+ A
Sbjct: 241 SVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAA 300
Query: 334 RGLDVQQ 340
RG+DV Q
Sbjct: 301 RGIDVSQ 307
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 99/305 (32%), Positives = 173/305 (56%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DV+ QA+SG GKT++ L Q ++ +
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
+V L++ TRELA Q K ++ +++ GG S+ +D L+ HVV G
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 170
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ +++ ++ + +K VLDE D+ML + + + +++R P + Q ++ SATL
Sbjct: 171 TPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATL 230
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
+I + KFM DP+++ V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 231 SKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNRKLFDLLDVLEFNQV 289
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
+IF + ++ L + + NF ++H M Q+ER + +F+ R+L+ T+++ RG
Sbjct: 290 IIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRG 349
Query: 336 LDVQQ 340
+D+++
Sbjct: 350 MDIER 354
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 105/311 (33%), Positives = 173/311 (55%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F + + + +++G+ GF + IQ++ + + G+DV QAQ+GTGKT+ +++
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 95 VDTSSR-----EVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
+ S R +A+IL+PTREL Q EK +G A GG + L+
Sbjct: 63 LLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALK 122
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP-DL- 207
G VV GTPGR+ D +K+K + I++LV+DE+D M GF + + R LPP D
Sbjct: 123 EGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYDKR 182
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
Q ++ SATL ++E+ +FM P K+ V +++T E ++Q V R+E KF L L
Sbjct: 183 QNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKE-KFPLLLGLL 241
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
+ + +IF NTKR+ ++L E++ +F + GD+ Q++R I+ +F+SG ++I
Sbjct: 242 RKEGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMI 301
Query: 328 TTDVWARGLDV 338
TDV +RGL +
Sbjct: 302 ATDVASRGLHI 312
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 102/319 (31%), Positives = 172/319 (53%)
Query: 21 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSG 80
++ ET E TSF +G+ + L Q G++KP+ IQ A+ ++GRDVI A++G
Sbjct: 67 LIEETVTTGEIHTSFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETG 126
Query: 81 TGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKS 140
+GKT A+ V Q++ ++ + L+L+PTRELA Q + A+G I ++ VGG
Sbjct: 127 SGKTGAFAVPVLQSLLACAQRLHTLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGID 186
Query: 141 VGEDIRKLEHGVHVVSGTPGRVCD-MIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDV 199
+ L HVV TPGR+ D M K RA+K LV+DE+D +L+ F+ ++ +
Sbjct: 187 MMSQALVLAKKPHVVIATPGRLIDHMENTKGFNLRALKYLVMDEADRILNMDFESEVDKI 246
Query: 200 YRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWK 259
+ +P D + L SAT+ ++ ++ + DPVK V T++ ++QF++ + ++K
Sbjct: 247 LKVIPRDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKLQQFYIFIP-SKYK 305
Query: 260 FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFR 319
L + + L ++FC T + +R T +HG M Q +R + +F+
Sbjct: 306 DCYLVSILNELAGNSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFK 365
Query: 320 SGTTRVLITTDVWARGLDV 338
S + VL+ TDV +RGLD+
Sbjct: 366 SKSRSVLLATDVASRGLDI 384
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 108/306 (35%), Positives = 168/306 (54%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I GFE PS +Q + I G DVI QA+SG GKT++ L+ Q ++ S
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVG--EDIRKLEHGVHVVS 156
+V AL+L TRELA Q + ++ + + GG ++ +D+ K E H+V
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECP-HIVV 171
Query: 157 GTPGRVCDMIKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRYLPPDLQVVLISAT 215
GTPGRV + + K L + ++ +LDE D+ML S + + ++++ P D QV++ SAT
Sbjct: 172 GTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 231
Query: 216 LPHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
L EI + KFM DP++I V + +LTL G+ Q ++ + E K L DL D L Q
Sbjct: 232 LSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQ 290
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
VIF + + L + + NF +H M Q+ER F+ G R+L+ TD+ R
Sbjct: 291 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGR 350
Query: 335 GLDVQQ 340
G+D+++
Sbjct: 351 GIDIER 356
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 111/318 (34%), Positives = 167/318 (52%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
IT+FD G D +L+ + GF KP+ IQ + + GRD+I A +G+GKT L
Sbjct: 126 ITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPS 185
Query: 92 CQTVDTSSREVQ------ALILSPTRELATQTEKVILAIGDFINIQAHACV-GGKSVGED 144
++ ++Q L+L+PTRELA Q + G I+ + CV GG G
Sbjct: 186 IVHINAQP-QLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIR-NTCVYGGAPKGPQ 243
Query: 145 IRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLP 204
IR L GV + TPGR+ DM++ + + LVLDE+D ML GF+ QI + +
Sbjct: 244 IRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIR 303
Query: 205 PDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLC 264
PD Q ++ SAT P E+ ++T ++ DP+++ + EL V V E K D L
Sbjct: 304 PDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLV 363
Query: 265 D-LYDTLTI--TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L L + ++F +TKR D +T +R + ++HGD Q ERD ++ EFR G
Sbjct: 364 KHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKG 423
Query: 322 TTRVLITTDVWARGLDVQ 339
T +++ TDV ARG+DV+
Sbjct: 424 KTSIMVATDVAARGIDVK 441
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 106/318 (33%), Positives = 170/318 (53%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E +F +G+ LL + + G P+ IQQ+A+ +++G+DV+A AQ+GTGKT+ L
Sbjct: 3 ELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGL 62
Query: 90 TVCQTV-------DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVG 142
+ Q + +S+E++AL+L PTRELA Q + A ++ A GG S+
Sbjct: 63 PLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMK 122
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
+ L GV ++ TPGR+ D K+L +++LVLDE+D ML GF + V R
Sbjct: 123 VQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRR 182
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
L P Q + SAT +I + + M DP+++ V T E ++Q V+++ K +
Sbjct: 183 LSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR-KREL 241
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
L L + Q ++F T++ D L E+++ S++GD Q R + +F++G
Sbjct: 242 LSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGK 301
Query: 323 TRVLITTDVWARGLDVQQ 340
R LI TDV ARGLD+ Q
Sbjct: 302 VRALIATDVAARGLDIAQ 319
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 106/318 (33%), Positives = 170/318 (53%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E +F +G+ LL + + G P+ IQQ+A+ +++G+DV+A AQ+GTGKT+ L
Sbjct: 3 ELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGL 62
Query: 90 TVCQTV-------DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVG 142
+ Q + +S+E++AL+L PTRELA Q + A ++ A GG S+
Sbjct: 63 PLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMK 122
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
+ L GV ++ TPGR+ D K+L +++LVLDE+D ML GF + V R
Sbjct: 123 VQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRR 182
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDT 262
L P Q + SAT +I + + M DP+++ V T E ++Q V+++ K +
Sbjct: 183 LSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR-KREL 241
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
L L + Q ++F T++ D L E+++ S++GD Q R + +F++G
Sbjct: 242 LSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGK 301
Query: 323 TRVLITTDVWARGLDVQQ 340
R LI TDV ARGLD+ Q
Sbjct: 302 VRALIATDVAARGLDIAQ 319
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 109/324 (33%), Positives = 167/324 (51%)
Query: 26 TEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTS 85
T+ ++ SF +GI L + + G+ P+ +Q + ++ GRDV+A A +G+GKT+
Sbjct: 2 TQASSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTA 61
Query: 86 MIALTVCQ------TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAH--ACVG 137
AL + Q + D S+ V+ L+L PTRELA Q L+ N Q A G
Sbjct: 62 AFALPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFG 121
Query: 138 GKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIY 197
G SV ++ L G V+ TPGR+ D++ L+ + VLDE+D MLS GF +++
Sbjct: 122 GVSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELE 181
Query: 198 DVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKI-LVKRDELTLEGIKQFFVAVERE 256
V LP Q +L SAT P E+ +TTK + P++ L E T+E Q + V RE
Sbjct: 182 QVLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIE---QRVITVNRE 238
Query: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMG 316
+ K L L +QA+IF + K + L +K+ + HGD Q R ++
Sbjct: 239 Q-KTALLAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLD 297
Query: 317 EFRSGTTRVLITTDVWARGLDVQQ 340
F++G VLI TD+ ARG+D+ +
Sbjct: 298 GFKNGEISVLIATDIAARGIDIDK 321
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 109/324 (33%), Positives = 167/324 (51%)
Query: 26 TEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTS 85
T+ ++ SF +GI L + + G+ P+ +Q + ++ GRDV+A A +G+GKT+
Sbjct: 2 TQASSSVASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTA 61
Query: 86 MIALTVCQ------TVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAH--ACVG 137
AL + Q + D S+ V+ L+L PTRELA Q L+ N Q A G
Sbjct: 62 AFALPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFG 121
Query: 138 GKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIY 197
G SV ++ L G V+ TPGR+ D++ L+ + VLDE+D MLS GF +++
Sbjct: 122 GVSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELE 181
Query: 198 DVYRYLPPDLQVVLISATLPHEILEMTTKFMTDPVKI-LVKRDELTLEGIKQFFVAVERE 256
V LP Q +L SAT P E+ +TTK + P++ L E T+E Q + V RE
Sbjct: 182 QVLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIE---QRVITVNRE 238
Query: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMG 316
+ K L L +QA+IF + K + L +K+ + HGD Q R ++
Sbjct: 239 Q-KTALLAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLD 297
Query: 317 EFRSGTTRVLITTDVWARGLDVQQ 340
F++G VLI TD+ ARG+D+ +
Sbjct: 298 GFKNGEISVLIATDIAARGIDIDK 321
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 99/306 (32%), Positives = 169/306 (55%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K ++LR I GFE PS +Q + + G D++ QA+SG GKT++ L Q ++ S
Sbjct: 48 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSD 107
Query: 100 REV-QALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVS 156
L++ TRELA Q K ++ ++ GG ++ +D L+ G H+V
Sbjct: 108 NNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVV 167
Query: 157 GTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISAT 215
GTPGR+ +I+ K L + +K VLDE D+ML + + + +++R P QV++ SAT
Sbjct: 168 GTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSAT 227
Query: 216 LPHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
L +I + KFM DP+++ V + +LTL G++Q +V ++ E K L +L D L Q
Sbjct: 228 LSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENE-KNKKLFELLDVLEFNQ 286
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
VIF + ++ L++ + NF +H M Q+ER +F+ R+L+ T+++ R
Sbjct: 287 VVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGR 346
Query: 335 GLDVQQ 340
G+D+++
Sbjct: 347 GMDIER 352
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 432 (157.1 bits), Expect = 7.3e-42, Sum P(2) = 7.3e-42
Identities = 108/302 (35%), Positives = 165/302 (54%)
Query: 46 RGIYQYGFEKPSAIQQRAVMPI-IKGRDVIAQAQSGTGKTS--MI-ALTVCQTVDTSSRE 101
R +Y GF PS IQ ++ PI ++ RD++A A++G+GKT +I Q + SR
Sbjct: 242 RMVYSAGFSAPSPIQAQS-WPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM 300
Query: 102 VQA-LILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPG 160
L+LSPTRELATQ + L G I GG G ++++E GV +V TPG
Sbjct: 301 GPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPG 360
Query: 161 RVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATLPHEI 220
R+ D+++ K + + LVLDE+D ML GF+ QI + +P Q ++ +AT P E+
Sbjct: 361 RLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEV 420
Query: 221 LEMTTKFMTDPVKILVKR-DELTL-EGIKQFFVAVEREEWKFDTLCDLYDTLTI-TQAVI 277
++ + +P ++ + DEL + I Q + E K L + + ++ +I
Sbjct: 421 RKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPME-KHSRLEQILRSQEPGSKIII 479
Query: 278 FCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLD 337
FC+TKR D L + F +++HGD Q ERD ++ +FRSG T VL+ TDV ARGLD
Sbjct: 480 FCSTKRMCDQLARNLTR-TFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLD 538
Query: 338 VQ 339
V+
Sbjct: 539 VK 540
Score = 39 (18.8 bits), Expect = 7.3e-42, Sum P(2) = 7.3e-42
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 32 ITSFDAMGIKDDLLR 46
+ SF+A G+ ++LLR
Sbjct: 160 LMSFEATGLPNELLR 174
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 95/310 (30%), Positives = 170/310 (54%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F ++G+ +L+ I + G+ PS IQ +A+ ++ G+DV+A AQ+GTGKT+ L + +
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 95 V----DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEH 150
+ + +V+ALIL+PTRELA Q + ++ G + +++ GG + ++++
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 151 GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVV 210
G ++ TPGR+ D+ + ++ +++LVLDE+D ML GF I+ + + LP Q +
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 211 LISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 270
L SAT EI E+ + +PV+I V T ++Q + ++ K D L L
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKK-KPDMLVKLVKEG 241
Query: 271 TITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTD 330
Q ++F TK + L + T +++HG+ Q R + +F++G R+L+ TD
Sbjct: 242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATD 301
Query: 331 VWARGLDVQQ 340
+ ARG+D+ Q
Sbjct: 302 IAARGIDIPQ 311
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 95/310 (30%), Positives = 170/310 (54%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
F ++G+ +L+ I + G+ PS IQ +A+ ++ G+DV+A AQ+GTGKT+ L + +
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 95 V----DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEH 150
+ + +V+ALIL+PTRELA Q + ++ G + +++ GG + ++++
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 151 GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVV 210
G ++ TPGR+ D+ + ++ +++LVLDE+D ML GF I+ + + LP Q +
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 211 LISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 270
L SAT EI E+ + +PV+I V T ++Q + ++ K D L L
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKK-KPDMLVKLVKEG 241
Query: 271 TITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTD 330
Q ++F TK + L + T +++HG+ Q R + +F++G R+L+ TD
Sbjct: 242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATD 301
Query: 331 VWARGLDVQQ 340
+ ARG+D+ Q
Sbjct: 302 IAARGIDIPQ 311
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 102/311 (32%), Positives = 172/311 (55%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF +G+ D L++ + Q G++KP+ IQ +A+ I++GRD+IA AQ+GTGKT+ L + +
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 94 TV---DTSSRE-VQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
+ T ++ V+ALIL PTRELA Q + + G +++ A GG ++L
Sbjct: 62 KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
GV V+ TPGR+ D+ ++ + I+++VLDE+D ML GF + I + LP ++Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
+L SATL ++ E+ + DP +I + ++ + I Q+ + V+++ K L L +
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDT-KSALLSHLINE 240
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
QA+IF TK L ++ + H Q R ++ +F+SG + L+ T
Sbjct: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
Query: 330 DVWARGLDVQQ 340
V ARG+D+ Q
Sbjct: 301 GVAARGIDIDQ 311
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 112/319 (35%), Positives = 169/319 (52%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
+F +G+ LL + + + +P+ IQ RA+ + GRD+IA A +G+GKT+ AL + Q
Sbjct: 9 TFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQ 68
Query: 94 TV--DTSSRE-------VQALILSPTRELATQTEKVILAIGDFIN--IQAHACVGGKSVG 142
+ D SS V L+L PTRELA Q I + N I+ A GG SV
Sbjct: 69 KLREDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSVN 128
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRY 202
+ L GV ++ TPGR+ D+I ++ +K LVLDE+D MLS GF +++ +
Sbjct: 129 IQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLAL 188
Query: 203 LPPDLQVVLISATLPHEILEMTTKFMTDPVKI-LVKRDELTLEGIKQFFVAVEREEWKFD 261
P Q +L SAT P ++ +T + + +P++I L D TL +++ F V + E K
Sbjct: 189 TPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADASTL--VQRVFT-VNKGE-KTA 244
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L L QA+IF N K + L EK+ T + HGD Q ER ++ F++G
Sbjct: 245 VLAHLIQQEQWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAG 304
Query: 322 TTRVLITTDVWARGLDVQQ 340
VLI TD+ ARGLD+++
Sbjct: 305 DIEVLIATDIAARGLDIEK 323
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 108/318 (33%), Positives = 166/318 (52%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL-- 89
+T F + + +L+ I + G+E P+ IQ A+ P ++GRDV+ AQ+GTGKT+ L
Sbjct: 1 MTKFSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPM 60
Query: 90 -TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKL 148
T+ +R ++L+L PTRELA Q + + + +GG S E +
Sbjct: 61 ITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALI 120
Query: 149 EHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQ 208
+ GV V+ TPGR+ D +R L ++++V+DE+D ML GF I ++ P Q
Sbjct: 121 DRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQ 180
Query: 209 VVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAV-----ERE-EWKFDT 262
+ SAT+ EI +T F++ P +I V R E I+Q V +RE K
Sbjct: 181 TLFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAV 240
Query: 263 LCDLYDTL--TITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRS 320
L L D T A+IFCN K VD + + ++ Y + + +HGD+ Q +R + FR
Sbjct: 241 LRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFRE 300
Query: 321 GTTRVLITTDVWARGLDV 338
G R+L+ +DV ARGLDV
Sbjct: 301 GKLRLLVASDVAARGLDV 318
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 102/311 (32%), Positives = 172/311 (55%)
Query: 34 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQ 93
SF +G+ D L++ + Q G++KP+ IQ +A+ I++GRD+IA AQ+GTGKT+ L + +
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 94 TV---DTSSRE-VQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE 149
+ T ++ V+ALIL PTRELA Q + + G +++ A GG ++L
Sbjct: 62 KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
GV V+ TPGR+ D+ ++ + I+++VLDE+D ML GF + I + LP ++Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
+L SATL ++ E+ + DP +I + ++ + I Q+ + V+++ K L L +
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDT-KSALLSHLINE 240
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
QA+IF TK L ++ + H Q R ++ +F+SG + L+ T
Sbjct: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
Query: 330 DVWARGLDVQQ 340
V ARG+D+ Q
Sbjct: 301 GVAARGIDIDQ 311
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 106/317 (33%), Positives = 168/317 (52%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F+ G + +L+ + Q GFE P+ IQQ+A + GRD++ + +G+GKT L
Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPA 180
Query: 92 -----CQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACV-GGKSVGEDI 145
Q + + L+L+PTRELA Q ++ G I+ + CV GG G I
Sbjct: 181 IVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIR-NTCVYGGVPRGPQI 239
Query: 146 RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP 205
R L GV + TPGR+ DM+ R + LVLDE+D ML GF+ QI + + P
Sbjct: 240 RDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRP 299
Query: 206 DLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLE-GIKQFFVAVEREEWKFDTLC 264
D Q V+ SAT P E+ + ++ D +++ V +L IKQ V+ + +
Sbjct: 300 DRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGK 359
Query: 265 DLYDTLTI--TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
D+ + L + +IF TKR D +T +R + ++HGD Q ERD ++ EFR+G
Sbjct: 360 DIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGK 419
Query: 323 TRVLITTDVWARGLDVQ 339
+ +++ TDV +RG+DV+
Sbjct: 420 SPIMVATDVASRGIDVK 436
>UNIPROTKB|Q9UHI6 [details] [associations]
symbol:DDX20 "Probable ATP-dependent RNA helicase DDX20"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=TAS]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0017053
GO:GO:0005654 GO:GO:0006917 GO:GO:0005856 GO:GO:0003677
GO:GO:0005681 GO:GO:0000244 GO:GO:0000122 GO:GO:0043065
GO:GO:0015030 GO:GO:0034660 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AF171063 EMBL:AF106019 EMBL:AK001506
EMBL:AL049557 EMBL:BC011556 EMBL:AL133598 IPI:IPI00005904
PIR:T43476 RefSeq:NP_009135.4 UniGene:Hs.591405 PDB:2OXC PDB:3B7G
PDBsum:2OXC PDBsum:3B7G ProteinModelPortal:Q9UHI6 SMR:Q9UHI6
DIP:DIP-32606N IntAct:Q9UHI6 MINT:MINT-96973 STRING:Q9UHI6
PhosphoSite:Q9UHI6 DMDM:12643886 PaxDb:Q9UHI6 PeptideAtlas:Q9UHI6
PRIDE:Q9UHI6 DNASU:11218 Ensembl:ENST00000369702 GeneID:11218
KEGG:hsa:11218 UCSC:uc001ebs.3 CTD:11218 GeneCards:GC01P112298
HGNC:HGNC:2743 HPA:CAB015427 HPA:HPA005516 HPA:HPA023541 MIM:606168
neXtProt:NX_Q9UHI6 PharmGKB:PA27209 HOGENOM:HOG000112184
HOVERGEN:HBG051330 InParanoid:Q9UHI6 KO:K13131 OMA:VEDYEHY
OrthoDB:EOG4SF95N PhylomeDB:Q9UHI6 EvolutionaryTrace:Q9UHI6
GenomeRNAi:11218 NextBio:42699 ArrayExpress:Q9UHI6 Bgee:Q9UHI6
CleanEx:HS_DDX20 Genevestigator:Q9UHI6 GermOnline:ENSG00000064703
Uniprot:Q9UHI6
Length = 824
Score = 445 (161.7 bits), Expect = 3.4e-41, P = 3.4e-41
Identities = 102/316 (32%), Positives = 175/316 (55%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIK-GRDVIAQAQSGTGKTSMIALTVCQ 93
F+++ + +L G+ GFE+PS +Q +A+ P+ + G D+I QA+SGTGKT + +
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVGEDIRKLEHGV 152
++ + Q LIL+PTRE+A Q VI AIG ++ H +GG + +D +L+
Sbjct: 123 SLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRG-FKDQIYDVYRYLPPDLQVVL 211
H+ G+PGR+ +I+ L +I+L +LDE+D++L G F++QI +Y LP Q++
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE-------EWKFDTLC 264
+SAT P + TK+M DP + + + +L G+KQ++ V E K L
Sbjct: 242 VSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHLQ 301
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+L+ + QA++F N + L + + F + G+M Q +R M + + R
Sbjct: 302 ELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCR 361
Query: 325 VLITTDVWARGLDVQQ 340
VLI+TD+ +RG+D ++
Sbjct: 362 VLISTDLTSRGIDAEK 377
>UNIPROTKB|F1PXG6 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000021679 Uniprot:F1PXG6
Length = 825
Score = 445 (161.7 bits), Expect = 3.4e-41, P = 3.4e-41
Identities = 102/316 (32%), Positives = 176/316 (55%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIK-GRDVIAQAQSGTGKTSMIALTVCQ 93
F+++ + +L G+ GFE+PS +Q +A+ P+ + G D+I QA+SGTGKT + +
Sbjct: 66 FESLLLSRPVLDGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 124
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVGEDIRKLEHGV 152
++ ++ Q LIL+PTRE+A Q VI AIG ++ H +GG + +D +L+
Sbjct: 125 SLVLENQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 183
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRG-FKDQIYDVYRYLPPDLQVVL 211
H+ G+PGR+ +I+ L +I+L +LDE+D++L G F++QI +Y LP Q++
Sbjct: 184 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 243
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE-------EWKFDTLC 264
+SAT P + TK+M DP + + + +L G+KQ++ V E K L
Sbjct: 244 VSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQ 303
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+L+ + QA++F N + L + + F + G+M Q +R M + + R
Sbjct: 304 ELFSRIPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCR 363
Query: 325 VLITTDVWARGLDVQQ 340
VLI+TD+ +RG+D ++
Sbjct: 364 VLISTDLTSRGIDAEK 379
>UNIPROTKB|J9P828 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000050085 Uniprot:J9P828
Length = 825
Score = 445 (161.7 bits), Expect = 3.4e-41, P = 3.4e-41
Identities = 102/316 (32%), Positives = 176/316 (55%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIK-GRDVIAQAQSGTGKTSMIALTVCQ 93
F+++ + +L G+ GFE+PS +Q +A+ P+ + G D+I QA+SGTGKT + +
Sbjct: 66 FESLLLSRPVLDGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 124
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVGEDIRKLEHGV 152
++ ++ Q LIL+PTRE+A Q VI AIG ++ H +GG + +D +L+
Sbjct: 125 SLVLENQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 183
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRG-FKDQIYDVYRYLPPDLQVVL 211
H+ G+PGR+ +I+ L +I+L +LDE+D++L G F++QI +Y LP Q++
Sbjct: 184 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 243
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE-------EWKFDTLC 264
+SAT P + TK+M DP + + + +L G+KQ++ V E K L
Sbjct: 244 VSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQ 303
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+L+ + QA++F N + L + + F + G+M Q +R M + + R
Sbjct: 304 ELFSRIPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCR 363
Query: 325 VLITTDVWARGLDVQQ 340
VLI+TD+ +RG+D ++
Sbjct: 364 VLISTDLTSRGIDAEK 379
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 97/312 (31%), Positives = 171/312 (54%)
Query: 29 VEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIA 88
VE SF +G+ D L Q G++ P+ IQ A+ ++GRD+I A++G+GKT A
Sbjct: 21 VEEARSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFA 80
Query: 89 LTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGG-KSVGEDIRK 147
L + Q + + + + AL+L+PTRELA Q + A+G I + + VGG S+ + +
Sbjct: 81 LPILQALLDAPQRLFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLA- 139
Query: 148 LEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPD 206
L H++ TPGR+ D ++ K RA+K LV+DE+D +L+ F+ ++ + + +P D
Sbjct: 140 LAKKPHIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRD 199
Query: 207 LQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 266
+ L SAT+ ++ ++ + +PVK V T+E ++Q+++ + ++K L +
Sbjct: 200 RKTFLFSATMTKQVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIP-SKFKDSYLVYI 258
Query: 267 YDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVL 326
+ L +IFC+T +R FT +HG M Q +R + +F++ +L
Sbjct: 259 LNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKARSIL 318
Query: 327 ITTDVWARGLDV 338
+ TDV +RGLD+
Sbjct: 319 LATDVASRGLDI 330
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 93/312 (29%), Positives = 168/312 (53%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
++ F A + + ++ + G+++P+ IQ+ + +I G D++ AQ+GTGKT+ +L +
Sbjct: 1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPI 60
Query: 92 CQT-----VDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIR 146
+D ++ ++LIL+PTRELA+Q + I D + ++ GG +
Sbjct: 61 INKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVD 120
Query: 147 KLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPD 206
+E G+ ++ TPGR+ D+I+ + +A+++ VLDE+D ML GF + + LP
Sbjct: 121 SIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKS 180
Query: 207 LQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 266
Q +L SAT+P EI + +TDP KI + + +T++ + Q +++ K L ++
Sbjct: 181 RQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSN-KVPLLFNI 239
Query: 267 YDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVL 326
+ +IFC TK D + + + + T +S+H Q R+ + F+ T RVL
Sbjct: 240 LTKADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVL 299
Query: 327 ITTDVWARGLDV 338
+ TDV ARG+DV
Sbjct: 300 VATDVAARGIDV 311
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 97/305 (31%), Positives = 167/305 (54%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K ++LR I GFE PS +Q + I G DV+ QA+SG GKT++ +T Q ++
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEHGV-HVVSG 157
EV + + TRELA Q K ++ ++ GG ++ +D +L + H+V G
Sbjct: 108 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
Query: 158 TPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRG-FKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ + + L+ +K VLDE D+M+ + + ++ + P QV++ SATL
Sbjct: 168 TPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATL 227
Query: 217 PHEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 275
P E+ + +FM DP+++ V + +LTL G++Q +V ++ E K L +L D L Q
Sbjct: 228 PKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQV 286
Query: 276 VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARG 335
VIF ++ + L + + NF ++H M Q+ER + F+ R+L+ TD++ RG
Sbjct: 287 VIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRG 346
Query: 336 LDVQQ 340
+D+++
Sbjct: 347 MDIER 351
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 101/306 (33%), Positives = 170/306 (55%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +L R I GFE PS +Q + I G DVI QA+SG GKT++ L+ Q +D +
Sbjct: 55 LKPELERVIGDCGFEHPSEVQNECIPQAILGTDVICQAKSGMGKTAVFVLSTLQQIDNNP 114
Query: 100 REVQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVG--EDIRKLEHGVHVVS 156
+ L+L TRELA Q ++ N++ GG V +D+ K E +++
Sbjct: 115 NGITTLVLCNTRELAYQICDEFDRFTKYLPNVKTAVIYGGIPVQTHKDLIK-EKKPNIII 173
Query: 157 GTPGRVCDMIKRKTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRYLPPDLQVVLISAT 215
GTPGR+ + L + IK +LDE D ML S + + +++ +P + QV++ SAT
Sbjct: 174 GTPGRILQLASEGALSLKEIKQFILDECDTMLESLDMRKDVQKIFKLIPANKQVMMFSAT 233
Query: 216 LPHEILEMTTKFMTDPVKILVKR-DELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQ 274
L I + KFM +P++I + +LTL G++Q++V + EE K L +L D+L Q
Sbjct: 234 LSDTIRPICKKFMNNPLEIYINDGSKLTLHGLQQYYVPIT-EEQKNKKLIELLDSLDFNQ 292
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
AVIF + R+ D L + ++ F +H D+ QK+R +F++ +R+++ T+++ R
Sbjct: 293 AVIFVKSVRRADALNKILQDIGFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGR 352
Query: 335 GLDVQQ 340
G+D+++
Sbjct: 353 GIDIER 358
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 99/317 (31%), Positives = 172/317 (54%)
Query: 24 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGK 83
+T VE +F +G+ D L Q G+ KP+ IQ A+ ++GRD+I A++G+GK
Sbjct: 17 QTAVEVEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGK 76
Query: 84 TSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGG-KSVG 142
T AL + + + + + AL+L+PTRELA Q + A+G I +Q VGG S+
Sbjct: 77 TGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMS 136
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 201
+ + L H+V TPGR+ D ++ K RA+K LV+DE+D +L+ F+ ++ + +
Sbjct: 137 QSLA-LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 195
Query: 202 YLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFD 261
+P D + L SAT+ ++ ++ + +PVK V T+E ++Q+++ + ++K
Sbjct: 196 VIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIP-SKFKDT 254
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L + + L +IFC+T +R FT +HG M Q +R + +F++
Sbjct: 255 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 314
Query: 322 TTRVLITTDVWARGLDV 338
+L+ TDV +RGLD+
Sbjct: 315 ARSILLATDVASRGLDI 331
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 108/318 (33%), Positives = 169/318 (53%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
IT+FD G D +L + GF+KP+ IQ + + GRD++ A +G+GKT L
Sbjct: 112 ITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 171
Query: 92 CQTVDTSSREVQA-----LILSPTRELATQTEKVILAIGDFINIQAHACV-GGKSVGEDI 145
++ L+L+PTRELA Q + G I+ + CV GG + I
Sbjct: 172 IVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIR-NTCVYGGVPKSQQI 230
Query: 146 RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP 205
R L G +V TPGR+ DM++ + + LVLDE+D ML GF+ QI + + P
Sbjct: 231 RDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRP 290
Query: 206 DLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLE-GIKQFFVAVEREEWKFDTLC 264
D Q ++ SAT P E+ ++ ++ DP+++ V EL+ I Q V E K D L
Sbjct: 291 DRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFE-KRDRLN 349
Query: 265 DLYDTLTIT---QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
+T + + +IF +TKR D +T+ +R + ++HGD Q+ERD ++ EFR+G
Sbjct: 350 KYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNG 409
Query: 322 TTRVLITTDVWARGLDVQ 339
+ +++ TDV ARG+DV+
Sbjct: 410 RSPIMVATDVAARGIDVK 427
>UNIPROTKB|F1MAM8 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 GeneTree:ENSGT00530000062880 IPI:IPI00947925
RefSeq:NP_001178640.1 UniGene:Rn.137424 Ensembl:ENSRNOT00000068152
GeneID:84473 KEGG:rno:84473 NextBio:616964 ArrayExpress:F1MAM8
Uniprot:F1MAM8
Length = 824
Score = 442 (160.7 bits), Expect = 7.2e-41, P = 7.2e-41
Identities = 101/316 (31%), Positives = 175/316 (55%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIK-GRDVIAQAQSGTGKTSMIALTVCQ 93
F+++ + +L G+ GFE+PS +Q +A+ P+ + G D+I QA+SGTGKT + +
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVGEDIRKLEHGV 152
++ + Q LIL+PTRE+A Q VI AIG ++ H +GG + +D +L+
Sbjct: 123 SLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRG-FKDQIYDVYRYLPPDLQVVL 211
H+ G+PGR+ +I+ L +I+L +LDE+D++L G F++QI +Y LP Q++
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE-------EWKFDTLC 264
+SAT P + T++M DP + + + +L G+KQ++ V E K L
Sbjct: 242 VSATYPEILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQ 301
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+L+ + QA++F N + L + + F + G+M Q +R M + + R
Sbjct: 302 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCR 361
Query: 325 VLITTDVWARGLDVQQ 340
VLI+TD+ +RG+D ++
Sbjct: 362 VLISTDLTSRGIDAEK 377
>MGI|MGI:1858415 [details] [associations]
symbol:Ddx20 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 20"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IPI] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1858415 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:CH466608 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11218 HOGENOM:HOG000112184 HOVERGEN:HBG051330
KO:K13131 OMA:VEDYEHY OrthoDB:EOG4SF95N EMBL:AJ250027 EMBL:AF220454
EMBL:BC125471 EMBL:BC137721 IPI:IPI00122400 RefSeq:NP_059093.3
UniGene:Mm.272826 ProteinModelPortal:Q9JJY4 SMR:Q9JJY4
IntAct:Q9JJY4 STRING:Q9JJY4 PhosphoSite:Q9JJY4 PaxDb:Q9JJY4
PRIDE:Q9JJY4 Ensembl:ENSMUST00000090680 GeneID:53975 KEGG:mmu:53975
GeneTree:ENSGT00530000062880 InParanoid:Q059Z6 NextBio:310865
Bgee:Q9JJY4 CleanEx:MM_DDX20 Genevestigator:Q9JJY4
GermOnline:ENSMUSG00000027905 Uniprot:Q9JJY4
Length = 825
Score = 442 (160.7 bits), Expect = 7.2e-41, P = 7.2e-41
Identities = 101/316 (31%), Positives = 175/316 (55%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIK-GRDVIAQAQSGTGKTSMIALTVCQ 93
F+++ + +L G+ GFE+PS +Q +A+ P+ + G D+I QA+SGTGKT + +
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 123
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVGEDIRKLEHGV 152
++ + Q LIL+PTRE+A Q VI AIG ++ H +GG + +D +L+
Sbjct: 124 SLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 182
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRG-FKDQIYDVYRYLPPDLQVVL 211
H+ G+PGR+ +I+ L +I+L +LDE+D++L G F++QI +Y LP Q++
Sbjct: 183 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 242
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE-------EWKFDTLC 264
+SAT P + T++M DP + + + +L G+KQ++ V E K L
Sbjct: 243 VSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQ 302
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+L+ + QA++F N + L + + F + G+M Q +R M + + R
Sbjct: 303 ELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCR 362
Query: 325 VLITTDVWARGLDVQQ 340
VLI+TD+ +RG+D ++
Sbjct: 363 VLISTDLTSRGIDAEK 378
>UNIPROTKB|F1MRW7 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:DAAA02007520 IPI:IPI00867090
UniGene:Bt.13425 Ensembl:ENSBTAT00000024914 Uniprot:F1MRW7
Length = 825
Score = 440 (159.9 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 101/316 (31%), Positives = 174/316 (55%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIK-GRDVIAQAQSGTGKTSMIALTVCQ 93
F+++ + +L G+ GFE+PS +Q +A+ P+ + G D+I QA+SGTGKT + +
Sbjct: 64 FESLLLSRPVLEGLRAVGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVGEDIRKLEHGV 152
++ + Q LIL+PTRE+A Q VI AIG ++ H +GG + +D +L+
Sbjct: 123 SLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRG-FKDQIYDVYRYLPPDLQVVL 211
H+ G+PGR+ +I+ L +I+L +LDE+D++L G F++QI +Y LP Q++
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE-------EWKFDTLC 264
+SAT P + TK+M +P + + + +L G+KQ++ V E K L
Sbjct: 242 VSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKTQHLQ 301
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+L+ + QA++F N + L + + F + G+M Q R M + + R
Sbjct: 302 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAEYISGNMDQNRRLDAMAKLKQFHCR 361
Query: 325 VLITTDVWARGLDVQQ 340
VLI+TD+ +RG+D ++
Sbjct: 362 VLISTDLTSRGIDAEK 377
>UNIPROTKB|F1SBP3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 OMA:VEDYEHY GeneTree:ENSGT00530000062880 EMBL:CU466482
RefSeq:XP_001928579.1 UniGene:Ssc.6364 Ensembl:ENSSSCT00000007430
GeneID:100152786 KEGG:ssc:100152786 Uniprot:F1SBP3
Length = 832
Score = 440 (159.9 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 101/316 (31%), Positives = 175/316 (55%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIK-GRDVIAQAQSGTGKTSMIALTVCQ 93
F+++ + +L G+ GFE+PS +Q +A+ P+ + G D+I QA+SGTGKT + +
Sbjct: 71 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 129
Query: 94 TVDTSSREVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVGEDIRKLEHGV 152
++ + Q LIL+PTRE+A Q VI AIG ++ H +GG + +D +L+
Sbjct: 130 SLVLENLSTQILILAPTREIAVQIHSVITAIGVKMEGLECHVFIGGTPLSQDKTRLKK-C 188
Query: 153 HVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRG-FKDQIYDVYRYLPPDLQVVL 211
H+ G+PGR+ +I+ L +I+L +LDE+D++L G F++QI +Y LP Q++
Sbjct: 189 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 248
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE-------EWKFDTLC 264
+SAT P + TK+M +P + + + +L G+KQ++ V E K L
Sbjct: 249 VSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKIFEEKAQHLQ 308
Query: 265 DLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTR 324
+L+ + QA++F N + L + + F + G+M Q +R M + + R
Sbjct: 309 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAVCISGNMNQNQRLDAMAKLKQFHCR 368
Query: 325 VLITTDVWARGLDVQQ 340
VLI+TD+ +RG+D ++
Sbjct: 369 VLISTDLTSRGIDAEK 384
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 435 (158.2 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 101/318 (31%), Positives = 172/318 (54%)
Query: 33 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIK-GRDVIAQAQSGTGKTSMIALTV 91
+ F ++ + +L G+ GF +PS +Q +A+ P+ + G D+I QA+SGTGKT + +
Sbjct: 21 SDFGSLLLSPPVLAGLEAAGFHRPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIA 79
Query: 92 CQTVDTSSREVQALILSPTRELATQTEKVILAIG-DFINIQAHACVGGKSVGEDIRKLEH 150
+ S Q LIL+PTRE+A Q VI IG ++ H +GG + +D +L+
Sbjct: 80 LDALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKK 139
Query: 151 GVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRG-FKDQIYDVYRYLPPDLQV 209
H+ G+PGR+ +I+ L T +I+L +LDE+D++L G F++QI +Y LP + Q+
Sbjct: 140 -CHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQM 198
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVERE-------EWKFDT 262
+ +SAT P + T +M +P + + + +L G+KQ++ V E K
Sbjct: 199 LAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQH 258
Query: 263 LCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
L +L+ + QA++F N + L E + F + G M Q +R M + +
Sbjct: 259 LQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFH 318
Query: 323 TRVLITTDVWARGLDVQQ 340
RVLI+TD+ +RG+D ++
Sbjct: 319 CRVLISTDLTSRGIDAEK 336
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 96/311 (30%), Positives = 170/311 (54%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E +F +G+ D L Q G+ KP+ IQ A+ ++GRD+I A++G+GKT AL
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGG-KSVGEDIRKL 148
+ + + + + AL+L+PTRELA Q + A+G I +Q+ VGG S+ + + L
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA-L 139
Query: 149 EHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDL 207
H++ TPGR+ D ++ K RA+K LV+DE+D +L+ F+ ++ + + +P D
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
+ L SAT+ ++ ++ + +PVK V T+E ++Q+++ + ++K L +
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIP-SKFKDTYLVYIL 258
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
+ L +IFC+T +R FT +HG M Q +R + +F++ +L+
Sbjct: 259 NELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILL 318
Query: 328 TTDVWARGLDV 338
TDV +RGLD+
Sbjct: 319 ATDVASRGLDI 329
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 90/312 (28%), Positives = 169/312 (54%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
++ F ++G+ +L + + G+ P+ IQ++A+ +I+GRD++ AQ+GTGKT A +
Sbjct: 6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPI 65
Query: 92 CQTVDTSS-----REVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIR 146
+ ++ R + L+L+PTRELA Q G +N++ GG +G IR
Sbjct: 66 LDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIR 125
Query: 147 KLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPD 206
+LE G H++ TPGR+ D+++++ + ++ L+LDE+D+ML GF + + + +P
Sbjct: 126 QLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPSK 185
Query: 207 LQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDL 266
Q + SAT+P + + F+ +P ++ V T I+Q VE+ E K L +
Sbjct: 186 RQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPE-KASLLIEK 244
Query: 267 YDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVL 326
+ A++F TK D + +++ + ++HG+ Q +R+ + F++G +L
Sbjct: 245 IRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPIL 304
Query: 327 ITTDVWARGLDV 338
+ TD+ ARG+ V
Sbjct: 305 VATDIAARGIHV 316
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 98/317 (30%), Positives = 171/317 (53%)
Query: 24 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGK 83
+T E +F +G+ D L Q G+ KP+ IQ A+ ++GRD+I A++G+GK
Sbjct: 15 QTAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGK 74
Query: 84 TSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGG-KSVG 142
T AL + + + + + AL+L+PTRELA Q + A+G I +Q VGG S+
Sbjct: 75 TGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMS 134
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 201
+ + L H+V TPGR+ D ++ K RA+K LV+DE+D +L+ F+ ++ + +
Sbjct: 135 QSLA-LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 193
Query: 202 YLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFD 261
+P D + L SAT+ ++ ++ + +PVK V T+E ++Q+++ + ++K
Sbjct: 194 VIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIP-SKFKDT 252
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L + + L +IFC+T +R FT +HG M Q +R + +F++
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 322 TTRVLITTDVWARGLDV 338
+L+ TDV +RGLD+
Sbjct: 313 ARSILLATDVASRGLDI 329
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 98/317 (30%), Positives = 171/317 (53%)
Query: 24 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGK 83
+T E +F +G+ D L Q G+ KP+ IQ A+ ++GRD+I A++G+GK
Sbjct: 15 QTAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGK 74
Query: 84 TSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGG-KSVG 142
T AL + + + + + AL+L+PTRELA Q + A+G I +Q VGG S+
Sbjct: 75 TGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMS 134
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 201
+ + L H+V TPGR+ D ++ K RA+K LV+DE+D +L+ F+ ++ + +
Sbjct: 135 QSLA-LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 193
Query: 202 YLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFD 261
+P D + L SAT+ ++ ++ + +PVK V T+E ++Q+++ + ++K
Sbjct: 194 VIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIP-SKFKDT 252
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L + + L +IFC+T +R FT +HG M Q +R + +F++
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 312
Query: 322 TTRVLITTDVWARGLDV 338
+L+ TDV +RGLD+
Sbjct: 313 ARSILLATDVASRGLDI 329
>GENEDB_PFALCIPARUM|PFB0445c [details] [associations]
symbol:PFB0445c "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 305 (112.4 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 72/244 (29%), Positives = 135/244 (55%)
Query: 102 VQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR--KLEHGVHVVSGT 158
V+ L L+ TRELA Q + ++ N++ GG S+ + I+ K ++ H++ GT
Sbjct: 144 VRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIPHIIIGT 203
Query: 159 PGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATLP 217
PGR+ +I+ K L T I+ VLDE D+ L + + + ++ P QV+ SAT+
Sbjct: 204 PGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMA 263
Query: 218 HEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAV 276
E+ ++ KF+ +PV+I + + +L L G+ Q +V ++ ++ K L ++ D L Q +
Sbjct: 264 KEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKD-KTRKLIEILDALEFNQVI 322
Query: 277 IFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGL 336
IF + + L + + NF ++HG + Q+ER +F+ R+L++TD++ RG+
Sbjct: 323 IFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLFGRGI 382
Query: 337 DVQQ 340
D+++
Sbjct: 383 DIER 386
Score = 143 (55.4 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I + GFE PS +QQ + I G D++ QA+SG GKT++ L++ Q +DT+
Sbjct: 62 LKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTNE 121
Query: 100 RE 101
+
Sbjct: 122 NQ 123
>UNIPROTKB|Q9TY94 [details] [associations]
symbol:UAP56 "DEAD box helicase, UAP56" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 305 (112.4 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 72/244 (29%), Positives = 135/244 (55%)
Query: 102 VQALILSPTRELATQTEKVILAIGDFI-NIQAHACVGGKSVGEDIR--KLEHGVHVVSGT 158
V+ L L+ TRELA Q + ++ N++ GG S+ + I+ K ++ H++ GT
Sbjct: 144 VRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIPHIIIGT 203
Query: 159 PGRVCDMIKRKTLRTRAIKLLVLDESDEMLSR-GFKDQIYDVYRYLPPDLQVVLISATLP 217
PGR+ +I+ K L T I+ VLDE D+ L + + + ++ P QV+ SAT+
Sbjct: 204 PGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMA 263
Query: 218 HEILEMTTKFMTDPVKILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAV 276
E+ ++ KF+ +PV+I + + +L L G+ Q +V ++ ++ K L ++ D L Q +
Sbjct: 264 KEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKD-KTRKLIEILDALEFNQVI 322
Query: 277 IFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGL 336
IF + + L + + NF ++HG + Q+ER +F+ R+L++TD++ RG+
Sbjct: 323 IFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLFGRGI 382
Query: 337 DVQQ 340
D+++
Sbjct: 383 DIER 386
Score = 143 (55.4 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 40 IKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSS 99
+K +LLR I + GFE PS +QQ + I G D++ QA+SG GKT++ L++ Q +DT+
Sbjct: 62 LKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTNE 121
Query: 100 RE 101
+
Sbjct: 122 NQ 123
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 435 (158.2 bits), Expect = 2.3e-40, P = 2.3e-40
Identities = 109/320 (34%), Positives = 176/320 (55%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPI-IKGRDVIAQAQSGTGKT------ 84
I F + + D +++ I + G++ P+AIQ + PI + G + + A++G+GKT
Sbjct: 280 IQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQG-WPIAMSGSNFVGIAKTGSGKTLGYILP 338
Query: 85 SMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACV-GGKSVGE 143
+++ + Q + + AL+L+PTRELA Q ++V G ++ + CV GG G
Sbjct: 339 AIVHINNQQPLQRGDGPI-ALVLAPTRELAQQIQQVATEFGSSSYVR-NTCVFGGAPKGG 396
Query: 144 DIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
+R L+ G +V TPGR+ D + + + LVLDE+D ML GF+ QI + +
Sbjct: 397 QMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQI 456
Query: 204 PPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLE-GIKQFFVAVER--EEWKF 260
PD Q ++ SAT P E+ ++ F+ + ++I + EL+ I+Q + +E K
Sbjct: 457 RPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKL 516
Query: 261 DTLC-DLYDTLTIT-QAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEF 318
TL D+YDT + +IF TKR+VD L +R + ++HGD Q ERD ++ EF
Sbjct: 517 KTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREF 576
Query: 319 RSGTTRVLITTDVWARGLDV 338
RSG + +L+ TDV ARGLDV
Sbjct: 577 RSGKSNILVATDVAARGLDV 596
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 433 (157.5 bits), Expect = 2.4e-40, P = 2.4e-40
Identities = 110/318 (34%), Positives = 166/318 (52%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+T+F ++ + Q F++P+AIQ + + GRD++ AQ+G+GKT L
Sbjct: 94 VTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPA 153
Query: 92 CQTVDTSSREVQA-----LILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIR 146
++ + L+L+PTRELA Q ++V G I++ GG G IR
Sbjct: 154 IVHINHQPYLERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIR 213
Query: 147 KLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPD 206
LE GV + TPGR+ D ++ R LVLDE+D ML GF+ QI + + PD
Sbjct: 214 DLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 273
Query: 207 LQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLE-GIKQFF-VAVEREEWKFDTLC 264
Q ++ SAT P E+ ++ F+ D V+I + EL+ I Q V +E E K + L
Sbjct: 274 RQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENE--KDNKLI 331
Query: 265 DLYDTLTI---TQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L + + + +IF TK++ D LT +MR + +HGD Q ERD ++ EFRSG
Sbjct: 332 QLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSG 391
Query: 322 TTRVLITTDVWARGLDVQ 339
+LI TDV +RGLDV+
Sbjct: 392 KAPILIATDVASRGLDVE 409
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 97/311 (31%), Positives = 170/311 (54%)
Query: 30 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL 89
E +F +G+ D L Q G+ KP+ IQ A+ ++GRD+I A++G+GKT AL
Sbjct: 47 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 106
Query: 90 TVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGG-KSVGEDIRKL 148
+ + + + + AL+L+PTRELA Q + A+G I +Q+ VGG S+ + + L
Sbjct: 107 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA-L 165
Query: 149 EHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDL 207
H+V TPGR+ D ++ K RA+K LV+DE+D +L+ F+ ++ + + +P D
Sbjct: 166 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 225
Query: 208 QVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 267
+ L SAT+ ++ ++ + +PVK V T+E ++Q+++ + ++K L +
Sbjct: 226 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIP-SKFKDTYLVYIL 284
Query: 268 DTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLI 327
+ L +IFC+T +R FT +HG M Q +R + +F++ +L+
Sbjct: 285 NELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILL 344
Query: 328 TTDVWARGLDV 338
TDV +RGLD+
Sbjct: 345 ATDVASRGLDI 355
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 98/317 (30%), Positives = 171/317 (53%)
Query: 24 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGK 83
+T E +F +G+ D L Q G+ KP+ IQ A+ ++GRD+I A++G+GK
Sbjct: 14 QTAVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGK 73
Query: 84 TSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGG-KSVG 142
T AL + + + + + AL+L+PTRELA Q + A+G I +Q VGG S+
Sbjct: 74 TGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMS 133
Query: 143 EDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYR 201
+ + L H+V TPGR+ D ++ K RA+K LV+DE+D +L+ F+ ++ + +
Sbjct: 134 QSLA-LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILK 192
Query: 202 YLPPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFD 261
+P D + L SAT+ ++ ++ + +PVK V T+E ++Q+++ + ++K
Sbjct: 193 VIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIP-SKFKDT 251
Query: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSG 321
L + + L +IFC+T +R FT +HG M Q +R + +F++
Sbjct: 252 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAK 311
Query: 322 TTRVLITTDVWARGLDV 338
+L+ TDV +RGLD+
Sbjct: 312 ARSILLATDVASRGLDI 328
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 434 (157.8 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 103/305 (33%), Positives = 161/305 (52%)
Query: 43 DLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIAL-----TVCQTVDT 97
D+L I + GF KPS IQ +A +++G D+I AQ+GTGKT L T Q+
Sbjct: 293 DMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPR 352
Query: 98 SSRE-VQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVS 156
+R L+L+PTRELA Q E + F ++A GG + I LE G ++
Sbjct: 353 GTRGGANVLVLAPTRELALQIEMEVKKYS-FRGMKAVCVYGGGNRNMQISDLERGAEIII 411
Query: 157 GTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVLISATL 216
TPGR+ D+I + I LVLDE+D ML GF+ QI V + PD Q ++ SAT
Sbjct: 412 CTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATW 471
Query: 217 PHEILEMTTKFMTDPVKILV-KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT-Q 274
P + + +M +P+++ V D +KQ +E + KF+T+ ++ T +
Sbjct: 472 PPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDK 531
Query: 275 AVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWAR 334
+IFC K + D L+ ++ F +HG+ Q +R+ + + +SG R+L+ TDV +R
Sbjct: 532 IIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASR 591
Query: 335 GLDVQ 339
GLD++
Sbjct: 592 GLDIE 596
>UNIPROTKB|P54475 [details] [associations]
symbol:cshB "DEAD-box ATP-dependent RNA helicase CshB"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0009409 "response to cold" evidence=IGI]
[GO:0043590 "bacterial nucleoid" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0009409 GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
EMBL:D84432 PIR:D69954 RefSeq:NP_390393.1 ProteinModelPortal:P54475
SMR:P54475 IntAct:P54475 EnsemblBacteria:EBBACT00000001897
GeneID:937908 KEGG:bsu:BSU25140 PATRIC:18976864 GenoList:BSU25140
HOGENOM:HOG000268806 OMA:YAHVEPK ProtClustDB:CLSK2301471
BioCyc:BSUB:BSU25140-MONOMER Uniprot:P54475
Length = 438
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 96/310 (30%), Positives = 165/310 (53%)
Query: 33 TSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVC 92
T F+ +K ++ +++ GF +P+ IQ+R + ++K VI Q+Q+GTGKT L +
Sbjct: 4 TKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLL 63
Query: 93 QTVDTSSREVQALILSPTRELATQTEKVILAI--GDF-INIQAHACVGGKSVGEDIRKLE 149
+D + VQ +I +PTRELA Q + L I G+ I++ +GG + I KL+
Sbjct: 64 NKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLK 123
Query: 150 HGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQV 209
H+V GTPGR+ D+IK + L + LV+DE+D ML GF + + +P DLQ+
Sbjct: 124 IQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPEDLQM 183
Query: 210 VLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDT 269
++ SAT+P ++ K+M +P V+ ++T I+ + + + K L D+
Sbjct: 184 LVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRD-KDKLLFDIMSH 242
Query: 270 LTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITT 329
L ++F NTK D + + + G + +HG + +ER +M + +I T
Sbjct: 243 LNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYIIAT 302
Query: 330 DVWARGLDVQ 339
D+ ARG+D++
Sbjct: 303 DLAARGIDIK 312
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 437 (158.9 bits), Expect = 3.8e-40, P = 3.8e-40
Identities = 107/324 (33%), Positives = 171/324 (52%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPI-IKGRDVIAQAQSGTGKTSMIALT 90
+ SF+ + ++ + + GF KP+AIQ + PI + GRD++ AQ+G+GKT L
Sbjct: 236 VVSFEESSLPAHVIEEMKRQGFTKPTAIQSQG-WPIALSGRDLVGIAQTGSGKTLAYMLP 294
Query: 91 VCQTVDTSSREVQ-----ALILSPTRELATQTEKVILAIGDFINIQA-HACV-GGKSVGE 143
+ ++ AL+L+PTRELA Q + V+ G + H C+ GG S
Sbjct: 295 AIVHIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVP 354
Query: 144 DIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYL 203
R L+ GV V+ TPGR+ D ++ + + LVLDE+D ML GF+ QI + +
Sbjct: 355 QARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 414
Query: 204 PPDLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLE-GIKQFFVAVEREEWKFDT 262
PD QVV+ SAT P E+ + F+ D ++I + L+ I+Q E
Sbjct: 415 RPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRL 474
Query: 263 LCDLYDTLTITQA-------VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIM 315
+C L + I + ++F TK KV+ + + +R + +S+HGD Q ERD+++
Sbjct: 475 VCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVL 534
Query: 316 GEFRSGTTRVLITTDVWARGLDVQ 339
+FR+G + +LI TDV +RGLDV+
Sbjct: 535 KDFRNGKSNILIATDVASRGLDVE 558
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 105/317 (33%), Positives = 165/317 (52%)
Query: 32 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTV 91
+ +FD G +L + GFEKP+AIQ + + GRDV+ A++G+GKT L
Sbjct: 139 VETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPA 198
Query: 92 CQTVDTSSREVQA-----LILSPTRELATQTEKVILAIGDFINIQAHACV-GGKSVGEDI 145
++ LIL+PTRELA Q + I G I+ + CV GG G I
Sbjct: 199 IVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIR-NTCVYGGVPKGPQI 257
Query: 146 RKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPP 205
R L GV V TPGR+ DM++ R + LVLDE+D ML GF+ QI + + P
Sbjct: 258 RDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRP 317
Query: 206 DLQVVLISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCD 265
D Q + SAT P E+ ++ + F+ + +++ + +L+ V V E K D +
Sbjct: 318 DRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIK 377
Query: 266 LYDTLTITQA---VIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGT 322
+ + + ++F TKR D +T +R + S+HGD Q+ERD ++ EF++G
Sbjct: 378 HLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGK 437
Query: 323 TRVLITTDVWARGLDVQ 339
+ +++ TDV +RG+DV+
Sbjct: 438 SPIMVATDVASRGIDVR 454
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 97/308 (31%), Positives = 168/308 (54%)
Query: 35 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQT 94
FD +G+ LL I + G+++ + +QQ+ + + G+D++A AQ+GTGKT+ AL V +
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQ 62
Query: 95 VDTSSRE---VQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHG 151
+ + ++AL+++PTRELA Q I F+ ++ A GG ++ + +E G
Sbjct: 63 LAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 122
Query: 152 VHVVSGTPGRVCDMIKRKTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVVL 211
V ++ TPGR+ D+I + L ++ LV+DE+D ML GF I V R + P Q +L
Sbjct: 123 VDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTML 182
Query: 212 ISATLPHEILEMTTKFMTDPVKILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLT 271
SAT + +++ K + P + V + T ++Q V++ K + L +L
Sbjct: 183 FSATYSDAVKQLSHKMLNQPQWVNVA-ENTTASTVEQLVYRVDKRR-KAELLSELVGRNN 240
Query: 272 ITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDV 331
Q ++F +TK + L +++ + HGD Q R+ ++ +F++G RVL+ TDV
Sbjct: 241 WRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDV 300
Query: 332 WARGLDVQ 339
ARGLD+Q
Sbjct: 301 AARGLDIQ 308
WARNING: HSPs involving 627 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 354 327 0.00088 116 3 11 22 0.50 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 877
No. of states in DFA: 612 (65 KB)
Total size of DFA: 210 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.88u 0.10s 27.98t Elapsed: 00:00:02
Total cpu time: 27.92u 0.10s 28.02t Elapsed: 00:00:02
Start: Mon May 20 19:59:09 2013 End: Mon May 20 19:59:11 2013
WARNINGS ISSUED: 2