Query 018577
Match_columns 353
No_of_seqs 288 out of 2509
Neff 7.4
Searched_HMMs 13730
Date Mon Mar 25 17:27:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018577.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018577hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gc6a2 c.72.2.2 (A:1-296) Fol 100.0 1.5E-55 1.1E-59 416.8 33.5 281 43-341 1-295 (296)
2 d1o5za2 c.72.2.2 (A:-2-293) Fo 100.0 2E-53 1.5E-57 402.1 30.7 281 43-343 4-295 (296)
3 d1e8ca3 c.72.2.1 (A:104-337) U 100.0 6E-35 4.4E-39 263.2 16.6 215 90-343 1-234 (234)
4 d2jfga3 c.72.2.1 (A:94-297) UD 100.0 8.8E-33 6.4E-37 245.0 12.0 187 93-342 10-204 (204)
5 d1gg4a4 c.72.2.1 (A:99-312) UD 100.0 3.9E-32 2.9E-36 241.1 15.6 195 95-342 3-213 (214)
6 d1p3da3 c.72.2.1 (A:107-321) U 100.0 9.7E-32 7.1E-36 240.3 17.5 189 94-342 12-215 (215)
7 d1j6ua3 c.72.2.1 (A:89-295) UD 100.0 2.7E-31 2E-35 236.4 16.6 196 77-342 2-207 (207)
8 d2p67a1 c.37.1.10 (A:1-327) LA 96.8 0.00052 3.8E-08 63.1 4.9 48 79-126 39-88 (327)
9 d2qm8a1 c.37.1.10 (A:5-327) Me 96.5 0.02 1.4E-06 52.0 13.9 49 78-126 35-85 (323)
10 d1byia_ c.37.1.10 (A:) Dethiob 95.8 0.003 2.2E-07 52.8 4.1 32 95-126 2-36 (224)
11 d1ihua2 c.37.1.10 (A:308-586) 93.7 0.061 4.4E-06 46.5 7.1 48 74-126 5-54 (279)
12 d1a7ja_ c.37.1.6 (A:) Phosphor 93.2 0.032 2.4E-06 49.7 4.3 35 92-126 2-38 (288)
13 d1np6a_ c.37.1.10 (A:) Molybdo 92.9 0.05 3.7E-06 42.8 4.8 33 94-126 2-36 (170)
14 d1vmaa2 c.37.1.10 (A:82-294) G 92.9 0.81 5.9E-05 38.3 12.9 42 87-128 4-47 (213)
15 d1j8yf2 c.37.1.10 (F:87-297) G 92.9 0.19 1.4E-05 42.4 8.7 40 89-128 7-48 (211)
16 d1rz3a_ c.37.1.6 (A:) Hypothet 92.8 0.081 5.9E-06 42.6 6.0 52 78-129 5-59 (198)
17 d1xjca_ c.37.1.10 (A:) Molybdo 92.6 0.059 4.3E-06 43.0 4.8 33 94-126 1-35 (165)
18 d2afhe1 c.37.1.10 (E:1-289) Ni 92.0 0.065 4.8E-06 46.9 4.8 33 94-126 2-36 (289)
19 d1ls1a2 c.37.1.10 (A:89-295) G 90.8 0.78 5.7E-05 38.2 10.3 34 94-127 10-45 (207)
20 d1cp2a_ c.37.1.10 (A:) Nitroge 90.4 0.11 8.1E-06 44.6 4.6 32 95-126 2-35 (269)
21 d1khta_ c.37.1.1 (A:) Adenylat 90.2 0.13 9.3E-06 40.7 4.4 32 95-126 2-35 (190)
22 d1nksa_ c.37.1.1 (A:) Adenylat 89.3 0.11 8.3E-06 41.3 3.4 32 94-125 1-34 (194)
23 d1hyqa_ c.37.1.10 (A:) Cell di 89.3 0.14 1E-05 42.6 4.1 33 94-126 1-36 (232)
24 d1sq5a_ c.37.1.6 (A:) Pantothe 88.7 0.24 1.8E-05 44.1 5.5 44 86-129 71-119 (308)
25 d1g3qa_ c.37.1.10 (A:) Cell di 87.0 0.26 1.9E-05 40.8 4.5 32 95-126 3-37 (237)
26 d1okkd2 c.37.1.10 (D:97-303) G 85.9 0.43 3.1E-05 39.9 5.2 36 93-128 5-42 (207)
27 d1gsia_ c.37.1.1 (A:) Thymidyl 84.7 0.5 3.7E-05 38.3 5.0 34 96-129 2-37 (208)
28 d1ihua1 c.37.1.10 (A:1-296) Ar 84.4 0.3 2.2E-05 41.9 3.6 35 93-127 7-43 (296)
29 d2vo1a1 c.37.1.10 (A:1-273) CT 83.5 0.49 3.6E-05 41.0 4.5 37 94-130 1-42 (273)
30 d2qy9a2 c.37.1.10 (A:285-495) 82.4 0.87 6.3E-05 38.1 5.6 35 94-128 9-45 (211)
31 d1vhta_ c.37.1.1 (A:) Dephosph 81.8 0.46 3.3E-05 39.2 3.5 24 96-123 5-30 (208)
32 d2g0ta1 c.37.1.10 (A:1-338) Hy 81.3 2.4 0.00017 37.8 8.4 37 92-128 155-194 (338)
33 d1jjva_ c.37.1.1 (A:) Dephosph 77.8 0.64 4.7E-05 38.1 3.1 26 95-124 3-30 (205)
34 d1uj2a_ c.37.1.6 (A:) Uridine- 77.8 0.49 3.6E-05 38.7 2.4 27 95-121 3-31 (213)
35 d1m8pa3 c.37.1.15 (A:391-573) 76.3 1.4 9.9E-05 34.0 4.7 33 93-125 5-39 (183)
36 d1nn5a_ c.37.1.1 (A:) Thymidyl 75.9 1.5 0.00011 36.0 5.0 36 94-129 3-40 (209)
37 d2i3ba1 c.37.1.11 (A:1-189) Ca 75.1 1.4 0.0001 34.0 4.4 37 95-131 2-41 (189)
38 d1odfa_ c.37.1.6 (A:) Hypothet 73.8 2.3 0.00016 37.1 5.9 25 94-118 27-53 (286)
39 d4tmka_ c.37.1.1 (A:) Thymidyl 72.4 1.6 0.00012 35.4 4.3 33 95-127 3-37 (210)
40 d1deka_ c.37.1.1 (A:) Deoxynuc 71.6 1 7.5E-05 37.4 2.9 27 94-123 1-29 (241)
41 d1s1ma2 c.37.1.10 (A:1-266) CT 70.4 1.7 0.00013 37.3 4.1 32 94-125 3-38 (266)
42 d1vcoa2 c.37.1.10 (A:11-282) C 70.1 1.8 0.00013 37.4 4.1 33 94-126 2-38 (272)
43 d1uf9a_ c.37.1.1 (A:) Dephosph 69.5 1.4 0.00011 35.0 3.3 25 95-123 4-30 (191)
44 d1x6va3 c.37.1.4 (A:34-228) Ad 67.6 3.8 0.00028 31.9 5.6 34 93-126 18-53 (195)
45 d1qhxa_ c.37.1.3 (A:) Chloramp 67.5 1.5 0.00011 33.7 2.9 25 94-118 3-29 (178)
46 d1uaaa1 c.37.1.19 (A:2-307) DE 62.7 1.1 8.1E-05 38.2 1.2 29 92-121 15-44 (306)
47 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 61.9 2 0.00014 40.5 3.0 30 91-121 24-54 (623)
48 d1rkba_ c.37.1.1 (A:) Adenylat 61.8 2.3 0.00017 32.5 2.9 27 94-123 4-32 (173)
49 d1kaga_ c.37.1.2 (A:) Shikimat 61.3 1.9 0.00014 32.4 2.3 22 95-116 3-26 (169)
50 d1lw7a2 c.37.1.1 (A:220-411) T 61.2 1.7 0.00013 33.4 2.1 23 94-116 7-31 (192)
51 d1jwyb_ c.37.1.8 (B:) Dynamin 60.6 2.4 0.00018 36.5 3.2 35 78-112 8-44 (306)
52 d2akab1 c.37.1.8 (B:6-304) Dyn 60.5 3 0.00022 35.6 3.8 35 78-112 9-46 (299)
53 d1bifa1 c.37.1.7 (A:37-249) 6- 57.5 5.6 0.00041 31.3 4.8 33 95-127 3-37 (213)
54 d1eg7a_ c.37.1.10 (A:) Formylt 54.9 7.1 0.00052 36.7 5.5 47 74-125 36-88 (549)
55 d7reqa2 c.23.6.1 (A:561-728) M 50.8 34 0.0025 26.6 8.5 62 76-156 19-84 (168)
56 d1pjra1 c.37.1.19 (A:1-318) DE 46.2 5.4 0.0004 33.9 3.0 30 90-120 23-53 (318)
57 d1ckea_ c.37.1.1 (A:) CMP kina 46.1 6.3 0.00046 31.2 3.3 23 94-116 3-27 (225)
58 d2bdta1 c.37.1.25 (A:1-176) Hy 45.9 4.7 0.00035 30.3 2.3 22 95-116 3-26 (176)
59 d1p5zb_ c.37.1.1 (B:) Deoxycyt 44.7 1.2 8.8E-05 36.6 -1.7 29 93-121 1-31 (241)
60 d1q3ta_ c.37.1.1 (A:) CMP kina 44.1 6.7 0.00049 31.3 3.1 21 96-116 5-27 (223)
61 d1y63a_ c.37.1.1 (A:) Probable 43.9 6.8 0.00049 29.7 3.0 25 93-117 4-30 (174)
62 d1knqa_ c.37.1.17 (A:) Glucona 42.6 8.3 0.00061 29.1 3.4 25 93-117 5-31 (171)
63 d1nija1 c.37.1.10 (A:2-223) Hy 41.8 7.5 0.00055 31.8 3.1 31 93-126 2-35 (222)
64 d1p9ra_ c.37.1.11 (A:) Extrace 41.5 41 0.003 29.7 8.6 35 95-129 159-195 (401)
65 d1qf9a_ c.37.1.1 (A:) UMP/CMP 41.3 8 0.00058 30.3 3.1 25 92-116 4-30 (194)
66 d1vlja_ e.22.1.2 (A:) NADH-dep 41.2 49 0.0035 29.0 9.0 47 76-126 21-69 (398)
67 d2fzva1 c.23.5.4 (A:1-233) Put 41.0 20 0.0014 29.7 5.7 35 91-125 32-70 (233)
68 d2iyva1 c.37.1.2 (A:2-166) Shi 40.0 7.4 0.00054 29.8 2.6 20 97-116 4-25 (165)
69 d1o2da_ e.22.1.2 (A:) Alcohol 39.8 16 0.0012 32.0 5.3 45 77-126 17-63 (359)
70 d1ccwa_ c.23.6.1 (A:) Glutamat 39.4 36 0.0026 25.4 6.7 44 96-156 7-50 (137)
71 d1e5da1 c.23.5.1 (A:251-402) R 38.5 50 0.0037 24.3 7.6 47 77-123 69-116 (152)
72 d2vp4a1 c.37.1.1 (A:12-208) De 38.0 4.4 0.00032 31.9 0.9 24 93-116 8-33 (197)
73 d1e6ca_ c.37.1.2 (A:) Shikimat 36.5 9.5 0.00069 29.2 2.8 20 97-116 5-26 (170)
74 d2cyua1 a.9.1.1 (A:2-40) E3-bi 36.0 7.9 0.00058 23.0 1.6 37 17-53 2-38 (39)
75 d2ocpa1 c.37.1.1 (A:37-277) De 35.7 5.2 0.00038 32.6 1.0 27 94-120 2-30 (241)
76 d1tmka_ c.37.1.1 (A:) Thymidyl 34.0 6.7 0.00048 31.9 1.4 29 93-121 2-32 (214)
77 d1j33a_ c.39.1.1 (A:) Nicotina 33.8 80 0.0058 27.3 8.9 160 45-250 4-205 (333)
78 d1ukza_ c.37.1.1 (A:) Uridylat 33.7 11 0.00082 29.4 2.9 24 93-116 7-32 (196)
79 d1fnna2 c.37.1.20 (A:1-276) CD 33.6 31 0.0022 27.5 5.8 44 77-120 25-71 (276)
80 d1zp6a1 c.37.1.25 (A:6-181) Hy 33.1 8.9 0.00065 28.9 2.0 27 94-123 4-32 (176)
81 d1w85i_ a.9.1.1 (I:) E3/E1 bin 32.9 6.8 0.00049 23.7 0.9 39 15-53 3-41 (42)
82 d1yrba1 c.37.1.10 (A:1-244) AT 32.8 17 0.0013 28.8 4.0 30 96-126 2-33 (244)
83 d3bula2 c.23.6.1 (A:741-896) M 32.7 30 0.0022 26.5 5.3 45 96-157 10-54 (156)
84 d1wdka3 c.2.1.6 (A:311-496) Fa 30.8 89 0.0065 24.0 8.1 53 92-166 2-54 (186)
85 d1viaa_ c.37.1.2 (A:) Shikimat 30.4 14 0.001 28.1 2.8 20 97-116 3-24 (161)
86 d1y81a1 c.2.1.8 (A:6-121) Hypo 29.1 91 0.0067 22.1 7.5 36 94-130 1-37 (116)
87 d1teva_ c.37.1.1 (A:) UMP/CMP 28.7 18 0.0013 28.0 3.2 22 95-116 2-25 (194)
88 d1htwa_ c.37.1.18 (A:) Hypothe 27.8 15 0.0011 28.7 2.4 52 76-131 10-68 (158)
89 d1g5ta_ c.37.1.11 (A:) ATP:cor 27.8 12 0.00089 29.2 2.0 29 97-125 5-35 (157)
90 d1ewqa2 c.37.1.12 (A:542-765) 27.4 23 0.0017 28.9 3.9 28 95-122 36-67 (224)
91 d1krwa_ c.23.1.1 (A:) NTRC rec 27.0 75 0.0054 22.5 6.5 21 107-127 14-34 (123)
92 d1ly1a_ c.37.1.1 (A:) Polynucl 26.2 18 0.0013 26.4 2.7 18 95-112 3-22 (152)
93 d1urha2 c.46.1.2 (A:149-268) 3 25.9 63 0.0046 22.6 5.8 48 75-126 65-113 (120)
94 d1m7ga_ c.37.1.4 (A:) Adenosin 25.7 37 0.0027 26.9 4.8 34 93-126 23-59 (208)
95 d1xp8a1 c.37.1.11 (A:15-282) R 24.7 63 0.0046 26.9 6.3 34 95-128 58-93 (268)
96 d1zgza1 c.23.1.1 (A:2-121) Tor 24.3 81 0.0059 22.1 6.2 20 107-126 12-31 (120)
97 d1xhfa1 c.23.1.1 (A:2-122) Aer 22.3 84 0.0061 22.2 5.9 20 107-126 13-32 (121)
98 d1c1da1 c.2.1.7 (A:149-349) Ph 22.1 1E+02 0.0073 24.3 6.9 45 78-125 11-55 (201)
99 d2ak3a1 c.37.1.1 (A:0-124,A:16 22.0 33 0.0024 26.7 3.7 27 88-115 1-29 (189)
100 d1e8aa_ a.39.1.2 (A:) Calcycli 21.5 89 0.0065 21.1 5.6 30 159-188 53-82 (87)
101 d1mo6a1 c.37.1.11 (A:1-269) Re 21.2 54 0.0039 27.4 5.1 40 88-129 56-97 (269)
102 d1fc4a_ c.67.1.4 (A:) 2-amino- 21.1 1.7E+02 0.012 25.2 9.0 82 80-165 312-396 (401)
103 d1f0ya2 c.2.1.6 (A:12-203) Sho 20.0 1.8E+02 0.013 22.2 8.1 51 94-166 4-54 (192)
No 1
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=100.00 E-value=1.5e-55 Score=416.81 Aligned_cols=281 Identities=28% Similarity=0.434 Sum_probs=242.8
Q ss_pred ccHHHHHHHHHhchhhhhcCCCCCCCCCCCCCCChHHHHHHHHHcCCCCCCCcEEEEcCCCCchHHHHHHHHHHHHcCCC
Q 018577 43 PELMNFMNYLDSLKNFEKSGVPKGAGTDSDDGFDLGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYS 122 (353)
Q Consensus 43 ~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~l~r~~~~l~~lg~p~~~~~vI~VtGTnGKtSTt~ml~~IL~~~G~~ 122 (353)
|+|+|+++||++++.+. + +++|+||+++|++||+|++++++||||||||||||++||++||+++|++
T Consensus 1 m~~~e~~~~l~~~~~~~---~----------~~~l~r~~~~l~~lg~P~~~lkvI~VTGTNGKtST~~~i~~IL~~~G~k 67 (296)
T d2gc6a2 1 MNYTETVAYIHSFPRLA---K----------TGDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLT 67 (296)
T ss_dssp CCHHHHHHHHHTCCCCC----------------CCHHHHHHHHHTTCGGGSSCEEEEECSSSHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHhcCcCC---C----------CCCHHHHHHHHHHcCCchhhCCEEEEeccCcHHHHHHHHHHHHHhcCCc
Confidence 57999999999988653 2 3789999999999999999999999999999999999999999999999
Q ss_pred eEEecCCcccccceeeeeCCCCcccCHHHHHHHHHHHHHHHHHHHh-hcCCccChhHHHHHHHHHHHhhCCCCEEEEeec
Q 018577 123 VGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIR-LENGCITHFEVLTAMAFALFAQNHVDIAVIEAG 201 (353)
Q Consensus 123 vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~~~i~~~~~~~~~-~~~~~~t~FE~~t~~a~~~f~~~~~d~~VlEvG 201 (353)
||+|+|||+.+++||++++ |.+++++.+...+..+.+.+..+.. .....+++||..++.++.+|.+..+|++|+|+|
T Consensus 68 vG~~tSP~~~~~~e~~~~~--~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~d~~i~e~g 145 (296)
T d2gc6a2 68 VGLYTAPFIMRFNERIMID--HEPIPDAALVNAVAFVRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVG 145 (296)
T ss_dssp EEEECSSCSSCGGGGEEET--TEECCHHHHHHHHHHHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred eeeeecccccchhhhhccc--ccCCcHHHHHHHHHHHHHHHHhHHhhccCCCccHHHHHHHHHHHHHHHhcchhhhhhhH
Confidence 9999999999999999999 9999999999999999998887765 345689999999999999999999999999999
Q ss_pred CCCcccccccccccCCcEEEEccCChhhHhhhCCCHHHHHHHHHhcccCCCceeecC-chhHHHHHHHhHHhcCCCCccc
Q 018577 202 LGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPVVSAY-DAGIRATINGLSMFNDRPCQSC 280 (353)
Q Consensus 202 ~gg~~D~tn~v~~~~p~vaVITnI~~DHl~~lG~tle~ia~~Ka~Iik~g~~vv~~d-d~~~~~~~~~~~~~~~~~~~~~ 280 (353)
+|+++|++|++. |+++|||||+.||+++||+|+++||.+|++|++++.++|.++ ++.+.+++++.+...++.+...
T Consensus 146 ~g~~~d~~~~~~---~~~~viTni~~dH~~~lg~tle~Ia~~K~~i~k~~~~~v~~~~~~~~~~~i~~~~~~~~~~~~~~ 222 (296)
T d2gc6a2 146 IGGDTDSTNVIT---PVVSVLTEVALDHQKLLGHTITAIAKHKAGIIKRGIPVVTGNLVPDAAAVVAAKVATTGSQWLRF 222 (296)
T ss_dssp SSSTTSTTCSCC---CSEEEECCCCSTTHHHHCSSHHHHHHHHHTTCCTTCCEEECCCCHHHHHHHHHHHHHHTCCEEEB
T ss_pred HHHhhhhhhccc---ceeecccccchHHHHhhhhHHHHHHHhhhcccccccccccccccHHHHHHHHHHHHhhCCccccc
Confidence 999999999875 579999999999999999999999999999999999988764 6777888888887777654332
Q ss_pred --ceEEEeec------ceeee---eeeeeeeeCCCchHHHHHHHHHHHHHHHHH-hcCCCCCHHHHHHHHhcC
Q 018577 281 --DIIVQAER------DLKLS---IELLDVKLCMIGNHQLHNALTATCAALCLR-DQGGYLMLSYFLSGFREE 341 (353)
Q Consensus 281 --d~~~~~~~------~~~~~---~~~~~~~l~l~G~hq~~Na~~Alaaa~~l~-~~~~gi~~~~I~~gL~~~ 341 (353)
|+.+.... .+.+. .....++++|+|.||++||++|++++..|. ..+++++.+.|++||++.
T Consensus 223 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~L~G~hn~~Na~~Aia~~~~l~~~~~~~i~~e~I~~GL~~~ 295 (296)
T d2gc6a2 223 DRDFSVPKAKLHGWGQRFTYEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAAS 295 (296)
T ss_dssp TTTEEEEEEEECSSSEEEEEEETTEEEEEEEESCCSHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC
T ss_pred CcceeeeccccccCCceEEEEcCCCccCcCCCCCCcHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhh
Confidence 33332211 12222 122468899999999999999999999884 457889999999999874
No 2
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=2e-53 Score=402.12 Aligned_cols=281 Identities=35% Similarity=0.504 Sum_probs=233.5
Q ss_pred ccHHHHHHHHHhchhhhhcCCCCCCCCCCCCCCChHHHHHHHHHcCCCCCCCcEEEEcCCCCchHHHHHHHHHHHHcCCC
Q 018577 43 PELMNFMNYLDSLKNFEKSGVPKGAGTDSDDGFDLGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYS 122 (353)
Q Consensus 43 ~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~l~r~~~~l~~lg~p~~~~~vI~VtGTnGKtSTt~ml~~IL~~~G~~ 122 (353)
|+|+|+++||.+.+.+.+ + .++|+||+++|++||+|+.++++||||||||||||++||++||+++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~--i----------~~~l~r~~~~l~~lg~P~~~lkvI~VTGTNGKTSt~~~i~~IL~~~g~~ 71 (296)
T d1o5za2 4 MAYLEVLRYLYHKRPMGK--V----------KPGLERISMLLSKLGNPHLEYKTIHIGGTNGKGSVANMVSNILVSQGYR 71 (296)
T ss_dssp HHHHHHHHHHHTC-------C----------CCCSHHHHHHHHHTTCGGGSSEEEEEECSSSHHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHhhCCCCC--C----------CCChHHHHHHHHHcCCchhhCCEEEEEecCcHHHHHHHHHHHHHHcCCC
Confidence 679999999977543211 1 3789999999999999999999999999999999999999999999999
Q ss_pred eEEecCCcccccceeeeeCCCCcccCHHHHHHHHHHHHHHHHHHHhhcCCccChhHHHHHHHHHHHhhCCCCEEEEeecC
Q 018577 123 VGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGL 202 (353)
Q Consensus 123 vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~~~i~~~~~~~~~~~~~~~t~FE~~t~~a~~~f~~~~~d~~VlEvG~ 202 (353)
||+|+|||+.+++||++++ |.+++..++.+.+++++.............+|+||.+|++|+.+|...++|++|+|+|+
T Consensus 72 ~g~~~s~~~~~~~e~~~~~--~~~i~~~~l~~~~~~v~~~~~~~~~~~~~~~t~~e~~t~~a~~~~~~~~~d~~i~e~~~ 149 (296)
T d1o5za2 72 VGSYYSPHLSTFRERIRLN--EEYISEEDVVKIYETMEPILNELDKEEIFSPSFFEVVTAMAFLYFAEKNVDIAVLEVGL 149 (296)
T ss_dssp EEEECCSCSSCGGGGEEET--TEECCHHHHHHHHHHHHHHHHHHTTSTTTCCCHHHHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cceecccccccccccceec--CceeehHHHHHHHHHHHHhhhhhhcccCCCCchHHHHHHHHHHHhhhcccceeeeehhh
Confidence 9999999999999999999 99999999999999998887777777778999999999999999999999999999999
Q ss_pred CCcccccccccccCCcEEEEccCChhhHhhhCCCHHHHHHHHHhcccCCCceeec-CchhHHHHHHHhHHhcCCCCccc-
Q 018577 203 GGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGRPVVSA-YDAGIRATINGLSMFNDRPCQSC- 280 (353)
Q Consensus 203 gg~~D~tn~v~~~~p~vaVITnI~~DHl~~lG~tle~ia~~Ka~Iik~g~~vv~~-dd~~~~~~~~~~~~~~~~~~~~~- 280 (353)
+|+.|+++.++ |+++|||||+.||+|++|+++++|+.+|+++++++.+++.. +++.+.+++++.+...++++...
T Consensus 150 ~g~~d~~~~~~---~~i~viTNi~~DHld~L~~t~e~i~~~K~~i~~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~ 226 (296)
T d1o5za2 150 GGRLDATNVVF---PLCSTIVTVDRDHEKTLGYTIEQIAWEKSGIIKERVPLVTGERKREALKVMEDVARKKSSRMYVID 226 (296)
T ss_dssp SSTTCGGGGCC---CSCEEECCCCC-------CCHHHHHHHHGGGCCTTCCEEECCCCHHHHHHHHHHHHHHTCCEEEBT
T ss_pred ccchhhhhccc---cchhccccccccchhhccchhhhhHHhhhhccccCccccccccChHHHHHHHHHHHhcCCcceeee
Confidence 99999999875 57999999999999999999999999999999998886665 57788888888887777664432
Q ss_pred -ceEEEeec------ceeee--eeeeeeeeCCCchHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCC
Q 018577 281 -DIIVQAER------DLKLS--IELLDVKLCMIGNHQLHNALTATCAALCLRDQGGYLMLSYFLSGFREEHF 343 (353)
Q Consensus 281 -d~~~~~~~------~~~~~--~~~~~~~l~l~G~hq~~Na~~Alaaa~~l~~~~~gi~~~~I~~gL~~~~~ 343 (353)
|+.+.... .+.+. ....++.+||+|.||++||++|++++..+ |++|+.+.|++||++.+.
T Consensus 227 ~d~~~~~~~~~~~~~~~~~~~~~~~~~i~l~L~G~hni~Na~~AIa~~~~l---gl~i~~~~I~~gL~~~k~ 295 (296)
T d1o5za2 227 KDFSVKVKSLKLHENRFDYCGENTFEDLVLTMNGPHQIENAGVALKTLEAT---GLPLSEKAIREGLKNAKN 295 (296)
T ss_dssp TTBEEEEEECCTTCEEEEEESSSEEEEEEESSCSTHHHHHHHHHHHHHHHH---CCCCCHHHHHHHHHHCCC
T ss_pred eeeeeeeccccccCceEEEecCCcccccCCCCCCHHHHHHHHHHHHHHHHh---CcCCCHHHHHHHHHHhcC
Confidence 33333211 12222 23456889999999999999999999887 667899999999998754
No 3
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=6e-35 Score=263.17 Aligned_cols=215 Identities=19% Similarity=0.209 Sum_probs=149.2
Q ss_pred CCCCCcEEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHHHHHHHHHHHHHhh
Q 018577 90 PHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRL 169 (353)
Q Consensus 90 p~~~~~vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~~~i~~~~~~~~~~ 169 (353)
|++++++|+||||||||||+.||+++|+++|+++++..+-+.. ++ +.....
T Consensus 1 ps~~~~vI~ITGT~GKTTt~~~l~~iL~~~g~~~~~~gt~g~~-------~~--~~~~~~-------------------- 51 (234)
T d1e8ca3 1 PSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGNG-------LL--GKVIPT-------------------- 51 (234)
T ss_dssp GGGSSEEEEEESSSCHHHHHHHHHHHHHHTTCCEEEEETTEEE-------ET--TCCBCC--------------------
T ss_pred CCcCCeEEEEECCCcHHHHHHHHHHHHHHCCCCeEEECccccC-------cC--cccccc--------------------
Confidence 6789999999999999999999999999999999987653321 11 111100
Q ss_pred cCCccChhHHHHHHHHHHHhhCCCCEEEEeecCCCcccccccccccCCcEEEEccCChhhHhhhCCCHHHHHHHHHhccc
Q 018577 170 ENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIK 249 (353)
Q Consensus 170 ~~~~~t~FE~~t~~a~~~f~~~~~d~~VlEvG~gg~~D~tn~v~~~~p~vaVITnI~~DHl~~lG~tle~ia~~Ka~Iik 249 (353)
....+...+.... +..+...+++++++|++..|. ........+|+++|||||++||+|+|| ++|+|+.+|+.|++
T Consensus 52 ~~~t~~~~~~~~~--l~~~~~~~~~~~~le~ss~g~--~~~~~~~~~p~i~vitNi~~dHld~~~-~~e~~~~~K~~i~~ 126 (234)
T d1e8ca3 52 ENTTGSAVDVQHE--LAGLVDQGATFCAMEVSSHGL--VQHRVAALKFAASVFTNLSRDHLDYHG-DMEHYEAAKWLLYS 126 (234)
T ss_dssp SSSSCCHHHHHHH--HHHHHHTTCCEEEEECCHHHH--HTTTTTTCBCSEEEECCCCSCCHHHHS-SHHHHHHHHHHHHH
T ss_pred ccccccchhHHHH--HHHHhhcCCceeeeccCccch--hhhhhcccccceEEEeeccccchhhhc-cccceehhhhcccc
Confidence 0001112222221 234578899999999976553 333334445789999999999999998 99999999999987
Q ss_pred C---CCceeecCchhHHHHHHHhHHh----cC----CCCcccceEEEe---e-cc--eeee--eeeeeeeeCCCchHHHH
Q 018577 250 Y---GRPVVSAYDAGIRATINGLSMF----ND----RPCQSCDIIVQA---E-RD--LKLS--IELLDVKLCMIGNHQLH 310 (353)
Q Consensus 250 ~---g~~vv~~dd~~~~~~~~~~~~~----~~----~~~~~~d~~~~~---~-~~--~~~~--~~~~~~~l~l~G~hq~~ 310 (353)
. +..|+|+|||....+.+..... .. ......++.... . .. +.+. .....++++++|.||++
T Consensus 127 ~~~~~~~iin~Dd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~G~hni~ 206 (234)
T d1e8ca3 127 EHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVS 206 (234)
T ss_dssp TSBCCEEEEETTSHHHHHHHTTCTTCEEEESSSCCCTTTCSEEEEEEEEEECSSCEEEEEEETTCCEEEEECSCSHHHHH
T ss_pred ccccceeEEecccccchhhhhhhccceeeeeccccccccccccccccccccccccceeeeecCCceEEEEeCCCCHHHHH
Confidence 3 5569999999877665543211 00 011011111111 0 11 1222 23456889999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCC
Q 018577 311 NALTATCAALCLRDQGGYLMLSYFLSGFREEHF 343 (353)
Q Consensus 311 Na~~Alaaa~~l~~~~~gi~~~~I~~gL~~~~~ 343 (353)
|+++|+++|..+ |++.++|+++|++|+|
T Consensus 207 N~laAiava~~l-----Gi~~~~i~~~l~~fkP 234 (234)
T d1e8ca3 207 NLLLALATLLAL-----GYPLADLLKTAARLQP 234 (234)
T ss_dssp HHHHHHHHHHHT-----TCCHHHHHHHGGGCCC
T ss_pred HHHHHHHHHHHc-----CCCHHHHHHHHhhCCC
Confidence 999999999999 9999999999999865
No 4
>d2jfga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=99.98 E-value=8.8e-33 Score=244.96 Aligned_cols=187 Identities=21% Similarity=0.181 Sum_probs=135.7
Q ss_pred CCcEEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHHHHHHHHHHHHHhhcCC
Q 018577 93 KFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENG 172 (353)
Q Consensus 93 ~~~vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~~~i~~~~~~~~~~~~~ 172 (353)
+.|+|+||||||||||++||+++|+++|+++++..+ +|.|...
T Consensus 10 ~~~vI~VTGT~GKTTt~~~l~~iL~~~g~~~~~~~~--------------~~~~~~~----------------------- 52 (204)
T d2jfga3 10 QAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGN--------------IGLPALM----------------------- 52 (204)
T ss_dssp CSCEEEEECSSSHHHHHHHHHHHHHHTTCCEEEEET--------------TSSCGGG-----------------------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHhcCCCcccCCc--------------ccccccc-----------------------
Confidence 468999999999999999999999999999986432 3444321
Q ss_pred ccChhHHHHHHHHHHHhhCCCCEEEEeecCCCcccccccccccCCcEEEEccCChhhHhhhCCCHHHHHHHHHhcccCCC
Q 018577 173 CITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKYGR 252 (353)
Q Consensus 173 ~~t~FE~~t~~a~~~f~~~~~d~~VlEvG~gg~~D~tn~v~~~~p~vaVITnI~~DHl~~lG~tle~ia~~Ka~Iik~g~ 252 (353)
....+.|++|+|+|..+..+ +...+|+++|||||++||+|++|++++++...|..+++++.
T Consensus 53 ---------------~~~~~~~~~V~E~~~~~~~~----~~~~~p~i~viTNi~~dHld~~~~~~~~~~~~~~~i~~~~~ 113 (204)
T d2jfga3 53 ---------------LLDDECELYVLELSSFQLET----TSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAK 113 (204)
T ss_dssp ---------------GCCTTCCEEEEECCHHHHHT----CCCCCCSEEEECCCCSCCGGGCTTHHHHHHHHHHGGGTTCS
T ss_pred ---------------cccccceEEEEeeccccccc----ccccccccceeeeeccccccccccHHHHHHHHHHhhhcccc
Confidence 23568999999998765432 33456899999999999999998679999999999998865
Q ss_pred c-eeecCchhHHHHHHHh--HHhcCCCCcccceEEEeecc-eeeee----eeeeeeeCCCchHHHHHHHHHHHHHHHHHh
Q 018577 253 P-VVSAYDAGIRATINGL--SMFNDRPCQSCDIIVQAERD-LKLSI----ELLDVKLCMIGNHQLHNALTATCAALCLRD 324 (353)
Q Consensus 253 ~-vv~~dd~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~-~~~~~----~~~~~~l~l~G~hq~~Na~~Alaaa~~l~~ 324 (353)
. |+|.||+....+.... ...++.. ..++....... ..... .....+++++|.||++|+++|+++|..+
T Consensus 114 ~~v~n~dd~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~hn~~N~laAia~a~~l-- 189 (204)
T d2jfga3 114 VCVVNADDALTMPIRGADERCVSFGVN--MGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAA-- 189 (204)
T ss_dssp EEEEETTCGGGSCTTCCCTTEEEECSS--SSSEEEEEETTEEEEEETTEEEEEGGGCSCCSHHHHHHHHHHHHHHHHT--
T ss_pred ceeehhhhHHHHHHHccCCceEEeecc--ccchhhcccccccceeecCCccccccccCCCcHHHHHHHHHHHHHHHHc--
Confidence 5 7788887644321111 1112211 12333222211 11111 1112368999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcCC
Q 018577 325 QGGYLMLSYFLSGFREEH 342 (353)
Q Consensus 325 ~~~gi~~~~I~~gL~~~~ 342 (353)
|++.+.|+++|++|+
T Consensus 190 ---Gi~~~~i~~~L~~Ft 204 (204)
T d2jfga3 190 ---GLPRASSLKALTTFT 204 (204)
T ss_dssp ---TCCHHHHHHHHHHCC
T ss_pred ---CCCHHHHHHHHHhcC
Confidence 999999999999883
No 5
>d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=99.97 E-value=3.9e-32 Score=241.07 Aligned_cols=195 Identities=22% Similarity=0.263 Sum_probs=136.3
Q ss_pred cEEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHHHHHHHHHHHHHhhcCCcc
Q 018577 95 KTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGCI 174 (353)
Q Consensus 95 ~vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~~~i~~~~~~~~~~~~~~~ 174 (353)
|+|+||||||||||++||++||+.+|+++++..+ ++.++....
T Consensus 3 kvI~VTGTnGKTTt~~mi~~iL~~~g~~~~~~g~--------------~n~~~g~~~----------------------- 45 (214)
T d1gg4a4 3 RVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGN--------------LNNDIGVPM----------------------- 45 (214)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHTTTSCEEECCTT--------------CCSTTHHHH-----------------------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHHhCCCCEEEeCc--------------ccCccccch-----------------------
Confidence 7999999999999999999999999998876332 122221100
Q ss_pred ChhHHHHHHHHHHHhhCCCCEEEEeecCCCcccccccccccCCcEEEEccCChhhHhhhCCCHHHHHHHHHhcccC----
Q 018577 175 THFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKY---- 250 (353)
Q Consensus 175 t~FE~~t~~a~~~f~~~~~d~~VlEvG~gg~~D~tn~v~~~~p~vaVITnI~~DHl~~lG~tle~ia~~Ka~Iik~---- 250 (353)
.......+.++.++|++.....+...++....|+++|||||++||+|++| ++++|+++|+.+++.
T Consensus 46 ----------~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~viTNi~~dHld~~~-~~~~~~~~k~~~~~~~~~~ 114 (214)
T d1gg4a4 46 ----------TLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFG-SLAGVAKAKGEIFSGLPEN 114 (214)
T ss_dssp ----------HHTTCCTTCSEEEEECCCSSSSHHHHHHHHHCCSEEEECCCC---------CHHHHHHHHHGGGGGCCTT
T ss_pred ----------hhhhcccccccchhhhhhhhcccccccccccCchheeeehhccccccccc-cHHHHHhhhhhHhhhhccC
Confidence 01234567899999998887776766666667899999999999999997 899999999999864
Q ss_pred CCceeecCchhHHHHHHHhHH----hcCCCCcccceEEEe-----ec-ceeeee--eeeeeeeCCCchHHHHHHHHHHHH
Q 018577 251 GRPVVSAYDAGIRATINGLSM----FNDRPCQSCDIIVQA-----ER-DLKLSI--ELLDVKLCMIGNHQLHNALTATCA 318 (353)
Q Consensus 251 g~~vv~~dd~~~~~~~~~~~~----~~~~~~~~~d~~~~~-----~~-~~~~~~--~~~~~~l~l~G~hq~~Na~~Alaa 318 (353)
|..|+|.||+........... .++..-...|+.... .. .+.+.. ...++++|++|.||++|+++|+++
T Consensus 115 g~~v~n~dd~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~i~~~~~~~~~~l~l~G~hn~~NalaAia~ 194 (214)
T d1gg4a4 115 GIAIMNADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAAL 194 (214)
T ss_dssp CEEEEETTBCCHHHHHHHHTTSEEEEECSSCTTCSBEEEEEEECSSSEEEEEEETTEEEEEEECSSSTHHHHHHHHHHHH
T ss_pred CccccccccHHHHHHHHHhcCCceeeeccCCCCcceeeeeEEEeCCceEEEEEECCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 456999999887665543311 122111112332221 11 122222 345688999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHHHhcCC
Q 018577 319 ALCLRDQGGYLMLSYFLSGFREEH 342 (353)
Q Consensus 319 a~~l~~~~~gi~~~~I~~gL~~~~ 342 (353)
+..+ |++.+.|.++|++|+
T Consensus 195 ~~~l-----gi~~~~i~~~l~~fk 213 (214)
T d1gg4a4 195 SMSV-----GATLDAIKAGLANLK 213 (214)
T ss_dssp HHHT-----TCCHHHHHHHHTTCC
T ss_pred HHHc-----CCCHHHHHHHHHhcC
Confidence 9999 999999999999985
No 6
>d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=99.97 E-value=9.7e-32 Score=240.28 Aligned_cols=189 Identities=18% Similarity=0.171 Sum_probs=134.4
Q ss_pred CcEEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHHHHHHHHHHHHHhhcCCc
Q 018577 94 FKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEAIRLENGC 173 (353)
Q Consensus 94 ~~vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~~~i~~~~~~~~~~~~~~ 173 (353)
.++|+||||||||||+.||+++|+++|++++...+.....+ +.+.
T Consensus 12 ~~~I~ITGTnGKTTt~~~l~~iL~~~~~~~~~~~g~~~~~~---------~~~~-------------------------- 56 (215)
T d1p3da3 12 RHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSA---------GKNA-------------------------- 56 (215)
T ss_dssp SEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEEEEEETTT---------TEEE--------------------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHhCCCCceEeeCceeccC---------cccc--------------------------
Confidence 47999999999999999999999999999876433211111 1111
Q ss_pred cChhHHHHHHHHHHHhhCCCCEEEEeecCCCcccccccccccCCcEEEEccCChhhHhhhCCCHHHHHHHHHhcccC---
Q 018577 174 ITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGSLETIAMAKSGIIKY--- 250 (353)
Q Consensus 174 ~t~FE~~t~~a~~~f~~~~~d~~VlEvG~gg~~D~tn~v~~~~p~vaVITnI~~DHl~~lG~tle~ia~~Ka~Iik~--- 250 (353)
.....+++|+|++..... +...+|+++|||||++||+|++++++|+|+++|+.|++.
T Consensus 57 ---------------~~~~~~~~v~E~~~~~~~-----~~~~~p~~~viTNi~~dHld~~~~s~e~~~~~K~~i~~~~~~ 116 (215)
T d1p3da3 57 ---------------HLGASRYLIAEADESDAS-----FLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPF 116 (215)
T ss_dssp ---------------ECCSSSEEEEECCCTTSG-----GGGCCCSEEEECCCCCCSGGGGTTCHHHHHHHHHHHHTTSCT
T ss_pred ---------------ccCCCceEEEEcCCcccc-----ceeEcCCEEEEecccccccccccCCHHHHHHHHHHHHhcCCC
Confidence 124568999999876432 112468999999999999998866999999999999874
Q ss_pred -CCceeecCchhHHHHHHHhH---HhcCCC----CcccceEEEeecc-ee-e--eeeeeeeeeCCCchHHHHHHHHHHHH
Q 018577 251 -GRPVVSAYDAGIRATINGLS---MFNDRP----CQSCDIIVQAERD-LK-L--SIELLDVKLCMIGNHQLHNALTATCA 318 (353)
Q Consensus 251 -g~~vv~~dd~~~~~~~~~~~---~~~~~~----~~~~d~~~~~~~~-~~-~--~~~~~~~~l~l~G~hq~~Na~~Alaa 318 (353)
+..|+|.||+.......+.. ..++.. ....++....... +. . .....++.+|++|.||++|+++|+++
T Consensus 117 ~g~~V~n~dd~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~G~hn~~N~laAia~ 196 (215)
T d1p3da3 117 YGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAV 196 (215)
T ss_dssp TCEEEEETTCHHHHHHHHHHCSEEEEEESSTTCSEEEEEEEEETTEEEEEEECTTCCEEEEEESSCSHHHHHHHHHHHHH
T ss_pred CCEEEEeCcchHHHHHHHhcCCceEEEcccccccccccccccccccccccccccccceeeEEeCCCCHHHHHHHHHHHHH
Confidence 35689999988776655431 112211 1111111111111 11 1 12345688999999999999999999
Q ss_pred HHHHHhcCCCCCHHHHHHHHhcCC
Q 018577 319 ALCLRDQGGYLMLSYFLSGFREEH 342 (353)
Q Consensus 319 a~~l~~~~~gi~~~~I~~gL~~~~ 342 (353)
|..+ |++.++|+++|++|+
T Consensus 197 a~~l-----Gi~~~~i~~~L~~Fk 215 (215)
T d1p3da3 197 AKEE-----GIANEAILEALADFQ 215 (215)
T ss_dssp HHHT-----TCCHHHHHHHHHTCC
T ss_pred HHHc-----CCCHHHHHHHHHhcC
Confidence 9999 999999999999873
No 7
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=99.97 E-value=2.7e-31 Score=236.38 Aligned_cols=196 Identities=19% Similarity=0.151 Sum_probs=139.8
Q ss_pred hHHHHHHHHHcCCCCCCCcEEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHH
Q 018577 77 LGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLF 156 (353)
Q Consensus 77 l~r~~~~l~~lg~p~~~~~vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~ 156 (353)
|+.++.+|++ .+.++|+||||||||||+.||+++|++.|++++.+ +++++.++..
T Consensus 2 ~~~~~~~l~~-----~~~~~iAITGTnGKTTt~~~l~~iL~~~g~~~~~~-------------~g~~~~~~~~------- 56 (207)
T d1j6ua3 2 LHYFRDTLKR-----EKKEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVF-------------LGGIMDSLEH------- 56 (207)
T ss_dssp HHHHHHHHHH-----HCCCEEEEECSSSHHHHHHHHHHHHHHTTCCCEEE-------------CSSCCTTSTT-------
T ss_pred hHHHHHHHhh-----cCCCEEEEECCCCHHHHHHHHHHHHHhCCCCCeEE-------------ECCccccccc-------
Confidence 4556666665 35589999999999999999999999999987653 2322333321
Q ss_pred HHHHHHHHHHHhhcCCccChhHHHHHHHHHHHhhCCCCEEEEeecCCCcccccccccccCCcEEEEccCChhhHhhhCCC
Q 018577 157 HKIKGVLDEAIRLENGCITHFEVLTAMAFALFAQNHVDIAVIEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGGS 236 (353)
Q Consensus 157 ~~i~~~~~~~~~~~~~~~t~FE~~t~~a~~~f~~~~~d~~VlEvG~gg~~D~tn~v~~~~p~vaVITnI~~DHl~~lG~t 236 (353)
.....+.+++|+|++.... .+...+|+++|||||++||+|+||++
T Consensus 57 ------------------------------~~~~~~~~~~v~e~~e~~~-----~~~~~~p~iaviTNI~~dHLd~~~~~ 101 (207)
T d1j6ua3 57 ------------------------------GNYEKGNGPVVYELDESEE-----FFSEFSPNYLIITNARGDHLENYGNS 101 (207)
T ss_dssp ------------------------------SSEECCSSCEEEEECTTSG-----GGGGCCCSEEEECCCCCCCGGGGTTC
T ss_pred ------------------------------hhccCCCcceeEEeeechh-----hhhhhhhceeeeeechhhhhhccCcc
Confidence 0235678899999976543 23445689999999999999999988
Q ss_pred HHHHHHHHHhcccCCCc-eeecCchhHHHHHHHhHHhcCCCCcccceEEEee--c--c--eeee---eeeeeeeeCCCch
Q 018577 237 LETIAMAKSGIIKYGRP-VVSAYDAGIRATINGLSMFNDRPCQSCDIIVQAE--R--D--LKLS---IELLDVKLCMIGN 306 (353)
Q Consensus 237 le~ia~~Ka~Iik~g~~-vv~~dd~~~~~~~~~~~~~~~~~~~~~d~~~~~~--~--~--~~~~---~~~~~~~l~l~G~ 306 (353)
++.|+++|..+++.+.. |+|.||+....+ .. ..++... .++.+... . . +... ....+++++++|.
T Consensus 102 ~~~~~~~k~~~~~~~~~~i~n~dd~~~~~~-~~--~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~G~ 176 (207)
T d1j6ua3 102 LTRYRSAFEKISRNTDLVVTFAEDELTSHL-GD--VTFGVKK--GTYTLEMRSASRAEQKAMVEKNGKRYLELKLKVPGF 176 (207)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTCTTTGGG-CS--EEECSSS--SSEEEEEEEECSSCEEEEEEETTEEEEEEEESSCSH
T ss_pred ccccccccchhhhhcccccccccccccccc-cc--ccccccc--ccccccccccccccccccccccCcEEEEEEeCCCcH
Confidence 99999999999987654 667777653221 11 1122211 12221111 0 0 1111 1234688999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCC
Q 018577 307 HQLHNALTATCAALCLRDQGGYLMLSYFLSGFREEH 342 (353)
Q Consensus 307 hq~~Na~~Alaaa~~l~~~~~gi~~~~I~~gL~~~~ 342 (353)
||++|+++|+++|..+ |++.+.|.++|++|+
T Consensus 177 hn~~NalaAiava~~l-----gi~~~~i~~~L~~FK 207 (207)
T d1j6ua3 177 HNVLNALAVIALFDSL-----GYDLAPVLEALEEFR 207 (207)
T ss_dssp HHHHHHHHHHHHHHHT-----TCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHc-----CCCHHHHHHHHHhcC
Confidence 9999999999999999 999999999999883
No 8
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=96.76 E-value=0.00052 Score=63.07 Aligned_cols=48 Identities=21% Similarity=0.259 Sum_probs=39.0
Q ss_pred HHHHHHHHcCCCCCCCcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 79 RMNRLMDRLGNPHSKFKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 79 r~~~~l~~lg~p~~~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
..+++|+.+-....+..+|+|||. .||||...-|...+...|+++++.
T Consensus 39 ~~~~ll~~~~~~~~~~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavl 88 (327)
T d2p67a1 39 LSTQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVI 88 (327)
T ss_dssp HHHHHHHHHGGGCSCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhhhccCCceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeee
Confidence 356677766433456889999999 899999999999999999999875
No 9
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=96.50 E-value=0.02 Score=51.98 Aligned_cols=49 Identities=29% Similarity=0.361 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCCCCCCCcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 78 GRMNRLMDRLGNPHSKFKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 78 ~r~~~~l~~lg~p~~~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
+..+.+++.+-....+..+|+|||+ .||||+..-|...+...|+++++.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~igitG~pGaGKSTli~~l~~~~~~~g~~vaVi 85 (323)
T d2qm8a1 35 AAVRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVL 85 (323)
T ss_dssp HHHHHHHHHHGGGCCCSEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhhhccCCceEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeee
Confidence 4456666666444456789999997 789999999888888899999886
No 10
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=95.82 E-value=0.003 Score=52.80 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.5
Q ss_pred cEEEEcCCC---CchHHHHHHHHHHHHcCCCeEEe
Q 018577 95 KTVHIAGTK---GKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 95 ~vI~VtGTn---GKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
|.+-||||+ ||||++.-|+..|.+.|++|.++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~i 36 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEE
Confidence 456778876 99999999999999999999886
No 11
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=93.70 E-value=0.061 Score=46.53 Aligned_cols=48 Identities=21% Similarity=0.176 Sum_probs=38.8
Q ss_pred CCChHHHHHHHHHcCCCCCCCcEEEEcC--CCCchHHHHHHHHHHHHcCCCeEEe
Q 018577 74 GFDLGRMNRLMDRLGNPHSKFKTVHIAG--TKGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 74 ~~~l~r~~~~l~~lg~p~~~~~vI~VtG--TnGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
-++|.+|..-+++=| .++|.++| --|||||+..|+..|.+.|++|.+.
T Consensus 5 ~~~~~~~~~~~~~~~-----~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllv 54 (279)
T d1ihua2 5 IPSLSALVDDIARNE-----HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLT 54 (279)
T ss_dssp CCCHHHHHHHHHTTS-----CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CccHHHHHHHhhcCC-----CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 467888888777533 37777765 5689999999999999999999874
No 12
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=93.19 E-value=0.032 Score=49.68 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=29.0
Q ss_pred CCCcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 92 SKFKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 92 ~~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
.+.|+|+|||. .||||++..|.++|...|.++.+.
T Consensus 2 ~k~pIIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI 38 (288)
T d1a7ja_ 2 KKHPIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSI 38 (288)
T ss_dssp TTSCEEEEESCC---CCTHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEE
Confidence 46689999997 689999999999999999887554
No 13
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=92.93 E-value=0.05 Score=42.83 Aligned_cols=33 Identities=24% Similarity=0.197 Sum_probs=29.7
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
+|+|+|||. .||||.+.-|..-|...|++++..
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~ 36 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLI 36 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEe
Confidence 489999997 689999999999999999999874
No 14
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=92.92 E-value=0.81 Score=38.32 Aligned_cols=42 Identities=24% Similarity=0.304 Sum_probs=32.5
Q ss_pred cCCCCCCCcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEecC
Q 018577 87 LGNPHSKFKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYTS 128 (353)
Q Consensus 87 lg~p~~~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~tS 128 (353)
|..|..+..+|...|- .|||||.+=|++-+...|.+|++.+.
T Consensus 4 l~~~~~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~ 47 (213)
T d1vmaa2 4 LNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAA 47 (213)
T ss_dssp CCCCSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CcCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEee
Confidence 3445555667766665 58999999999999999999998653
No 15
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=92.88 E-value=0.19 Score=42.39 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=28.5
Q ss_pred CCCCCCcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEecC
Q 018577 89 NPHSKFKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYTS 128 (353)
Q Consensus 89 ~p~~~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~tS 128 (353)
.|.+...+|...|- .|||||.+=|++-++..|.+|++.+.
T Consensus 7 ~~~k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~ 48 (211)
T d1j8yf2 7 IPDKIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGA 48 (211)
T ss_dssp SCSSSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEe
Confidence 45566677777775 58999999999999999999998653
No 16
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.76 E-value=0.081 Score=42.58 Aligned_cols=52 Identities=27% Similarity=0.309 Sum_probs=37.1
Q ss_pred HHHHHHHHHcCCCCCC-CcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEecCC
Q 018577 78 GRMNRLMDRLGNPHSK-FKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYTSP 129 (353)
Q Consensus 78 ~r~~~~l~~lg~p~~~-~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~tSp 129 (353)
+++..+++..-+.+.+ .-+|+|+|- .||||++..|...|...|..+.....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~iIgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~~~ 59 (198)
T d1rz3a_ 5 DRIDFLCKTILAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMD 59 (198)
T ss_dssp HHHHHHHHHHHTSCCSSSEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred HHHHHHHHHHHhccCCCCEEEEEECCCCCCHHHHHHHHHHHhccccccceecccc
Confidence 3555555554333333 347999995 799999999999999999888765443
No 17
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.62 E-value=0.059 Score=42.98 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=29.6
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
+++|+|+|. .||||+..-|..-|+..|++|+..
T Consensus 1 Mkii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vi 35 (165)
T d1xjca_ 1 MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTV 35 (165)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEE
Confidence 478999997 689999999999999999999985
No 18
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=92.03 E-value=0.065 Score=46.85 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=28.8
Q ss_pred CcEEEEc--CCCCchHHHHHHHHHHHHcCCCeEEe
Q 018577 94 FKTVHIA--GTKGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 94 ~~vI~Vt--GTnGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
.+.|+|. |--|||||+.-|+..|.+.|++|.+.
T Consensus 2 Mr~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlI 36 (289)
T d2afhe1 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIV 36 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 4677786 78899999999999999999999764
No 19
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=90.85 E-value=0.78 Score=38.21 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=28.1
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEec
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYT 127 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~t 127 (353)
.++|.+.|- .|||||++-|++.+...|++|++.+
T Consensus 10 ~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit 45 (207)
T d1ls1a2 10 RNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVA 45 (207)
T ss_dssp SEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 456666665 5899999999999999999998754
No 20
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=90.45 E-value=0.11 Score=44.64 Aligned_cols=32 Identities=34% Similarity=0.363 Sum_probs=27.8
Q ss_pred cEEEEcC--CCCchHHHHHHHHHHHHcCCCeEEe
Q 018577 95 KTVHIAG--TKGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 95 ~vI~VtG--TnGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
+.|+|+| --||||++.-|+..|.+.|++|.+.
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllI 35 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVV 35 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEE
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEE
Confidence 5677775 5689999999999999999999875
No 21
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=90.17 E-value=0.13 Score=40.71 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=28.1
Q ss_pred cEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
++|.|+|. .||||++..|+.-|...|+++..+
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~~~ 35 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMV 35 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 68999997 789999999999999999887653
No 22
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=89.30 E-value=0.11 Score=41.25 Aligned_cols=32 Identities=25% Similarity=0.313 Sum_probs=27.9
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEE
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGC 125 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~ 125 (353)
+++|.|+|. .||||++..|+..|...|+++-.
T Consensus 1 mkiivi~G~~GsGKTT~~~~La~~L~~~~~~~~~ 34 (194)
T d1nksa_ 1 MKIGIVTGIPGVGKSTVLAKVKEILDNQGINNKI 34 (194)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHHHTTTCCEEE
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 478889997 78999999999999999988744
No 23
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=89.27 E-value=0.14 Score=42.62 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=28.9
Q ss_pred CcEEEEcCC---CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 94 FKTVHIAGT---KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 94 ~~vI~VtGT---nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
+|+|+|++. -||||++.-|+..|...|++|.+.
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~Vlli 36 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIV 36 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEE
Confidence 478888854 899999999999999999999874
No 24
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=88.65 E-value=0.24 Score=44.14 Aligned_cols=44 Identities=30% Similarity=0.313 Sum_probs=32.7
Q ss_pred HcCCCCCC-CcEEEEcCC--CCchHHHHHHHHHHHHc--CCCeEEecCC
Q 018577 86 RLGNPHSK-FKTVHIAGT--KGKGSTAAFLSSILRAE--GYSVGCYTSP 129 (353)
Q Consensus 86 ~lg~p~~~-~~vI~VtGT--nGKtSTt~ml~~IL~~~--G~~vg~~tSp 129 (353)
.||....+ .-+|+|+|. .||||++..|..+|+.. |.+|.+.+.-
T Consensus 71 fl~~~~~k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D 119 (308)
T d1sq5a_ 71 FLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTD 119 (308)
T ss_dssp HHTCC-CCCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGG
T ss_pred HhcccCCCCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeee
Confidence 35665444 458999996 79999999999999854 6777765443
No 25
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=87.03 E-value=0.26 Score=40.75 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=28.2
Q ss_pred cEEEEcCC---CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 95 KTVHIAGT---KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 95 ~vI~VtGT---nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
++|+|+|. -||||++.-|+..|...|++|.+.
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~Vlli 37 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAV 37 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEE
Confidence 57888755 789999999999999999999875
No 26
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=85.91 E-value=0.43 Score=39.93 Aligned_cols=36 Identities=28% Similarity=0.255 Sum_probs=29.8
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEecC
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYTS 128 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~tS 128 (353)
+.++|.+.|- .|||||++=|++.+...|.+|++.+.
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~ 42 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAG 42 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 4467777775 58999999999999999999998543
No 27
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.71 E-value=0.5 Score=38.29 Aligned_cols=34 Identities=35% Similarity=0.469 Sum_probs=29.2
Q ss_pred EEEEcCC--CCchHHHHHHHHHHHHcCCCeEEecCC
Q 018577 96 TVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYTSP 129 (353)
Q Consensus 96 vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~tSp 129 (353)
+|.|.|. .||||.+..|..-|.+.|++|-...-|
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~P 37 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP 37 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 4788886 799999999999999999998765545
No 28
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=84.41 E-value=0.3 Score=41.94 Aligned_cols=35 Identities=20% Similarity=0.109 Sum_probs=29.7
Q ss_pred CCcEEEEcC--CCCchHHHHHHHHHHHHcCCCeEEec
Q 018577 93 KFKTVHIAG--TKGKGSTAAFLSSILRAEGYSVGCYT 127 (353)
Q Consensus 93 ~~~vI~VtG--TnGKtSTt~ml~~IL~~~G~~vg~~t 127 (353)
..++|-++| --||||++..++..|.+.|+||.+..
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD 43 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVS 43 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEe
Confidence 356777876 57899999999999999999998753
No 29
>d2vo1a1 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.54 E-value=0.49 Score=41.02 Aligned_cols=37 Identities=30% Similarity=0.468 Sum_probs=31.0
Q ss_pred CcEEEEcC----CCCchHHHHHHHHHHHHcCCCeEEe-cCCc
Q 018577 94 FKTVHIAG----TKGKGSTAAFLSSILRAEGYSVGCY-TSPH 130 (353)
Q Consensus 94 ~~vI~VtG----TnGKtSTt~ml~~IL~~~G~~vg~~-tSp~ 130 (353)
+|.|-||| +=|||-|++-|..+|+..|++|... .-|+
T Consensus 1 mKyifVtGGV~S~lGKGi~~aSig~ll~~~g~~V~~~K~DPY 42 (273)
T d2vo1a1 1 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 42 (273)
T ss_dssp CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred CeEEEEeCCcccccchHHHHHHHHHHHHhCCceeEEEecccc
Confidence 36788999 6899999999999999999999663 3444
No 30
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=82.43 E-value=0.87 Score=38.09 Aligned_cols=35 Identities=23% Similarity=0.207 Sum_probs=28.6
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEecC
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYTS 128 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~tS 128 (353)
..+|.+.|- .|||||.+=|++-++..|.+|++.+.
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~ 45 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAG 45 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEec
Confidence 456666665 48999999999999999999998653
No 31
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=81.78 E-value=0.46 Score=39.21 Aligned_cols=24 Identities=29% Similarity=0.432 Sum_probs=19.9
Q ss_pred EEEEcCC--CCchHHHHHHHHHHHHcCCCe
Q 018577 96 TVHIAGT--KGKGSTAAFLSSILRAEGYSV 123 (353)
Q Consensus 96 vI~VtGT--nGKtSTt~ml~~IL~~~G~~v 123 (353)
+|+|||. .||||++.+ |++.|+.+
T Consensus 5 iIgitG~igSGKStv~~~----l~~~G~~v 30 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANA----FADLGINV 30 (208)
T ss_dssp EEEEECCTTSCHHHHHHH----HHHTTCEE
T ss_pred EEEEECCCcCCHHHHHHH----HHHCCCcE
Confidence 8999997 789998875 57789875
No 32
>d2g0ta1 c.37.1.10 (A:1-338) Hypothetical protein TM0796 {Thermotoga maritima [TaxId: 2336]}
Probab=81.30 E-value=2.4 Score=37.79 Aligned_cols=37 Identities=32% Similarity=0.368 Sum_probs=32.3
Q ss_pred CCCcEEEEcCC---CCchHHHHHHHHHHHHcCCCeEEecC
Q 018577 92 SKFKTVHIAGT---KGKGSTAAFLSSILRAEGYSVGCYTS 128 (353)
Q Consensus 92 ~~~~vI~VtGT---nGKtSTt~ml~~IL~~~G~~vg~~tS 128 (353)
.+.+.|.|-|| -||=||+-.|...|++.|+++++..+
T Consensus 155 ~~~~rvl~vGTDca~GK~tTal~l~~~l~~~G~~a~fiaT 194 (338)
T d2g0ta1 155 KKIKVVGVFGTDCVVGKRTTAVQLWERALEKGIKAGFLAT 194 (338)
T ss_dssp CCSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCCcEEEEeccCccccHHHHHHHHHHHHHhCCCCeeEEEc
Confidence 35688999998 79999999999999999999987544
No 33
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=77.80 E-value=0.64 Score=38.09 Aligned_cols=26 Identities=23% Similarity=0.334 Sum_probs=20.1
Q ss_pred cEEEEcCC--CCchHHHHHHHHHHHHcCCCeE
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSILRAEGYSVG 124 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg 124 (353)
.+|||||. .||||++. +|++.|+.+.
T Consensus 3 ~iIgITG~igSGKStv~~----~l~~~G~~vi 30 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIAN----LFTDLGVPLV 30 (205)
T ss_dssp EEEEEECSTTSCHHHHHH----HHHTTTCCEE
T ss_pred EEEEEECCCCCCHHHHHH----HHHHCCCeEE
Confidence 57999997 78999776 5567788763
No 34
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.79 E-value=0.49 Score=38.74 Aligned_cols=27 Identities=22% Similarity=0.316 Sum_probs=22.9
Q ss_pred cEEEEcCC--CCchHHHHHHHHHHHHcCC
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSILRAEGY 121 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL~~~G~ 121 (353)
-+|+|||. .||||.+..|...|...+.
T Consensus 3 ~iIgI~G~~gSGKSTla~~L~~~l~~~~~ 31 (213)
T d1uj2a_ 3 FLIGVSGGTASGKSSVCAKIVQLLGQNEV 31 (213)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTGGGS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhchhcc
Confidence 47999996 7899999999999876543
No 35
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=76.29 E-value=1.4 Score=33.97 Aligned_cols=33 Identities=24% Similarity=0.236 Sum_probs=27.0
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEE
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGC 125 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~ 125 (353)
+..+|-++|. .||||++..|+.-|...++....
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~~~~~~~~~ 39 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVS 39 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHHCSSCEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhcCCCchh
Confidence 3467889995 79999999999999988776544
No 36
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.95 E-value=1.5 Score=36.04 Aligned_cols=36 Identities=22% Similarity=0.236 Sum_probs=29.1
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEecCC
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYTSP 129 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~tSp 129 (353)
-..|.|.|- .||||.+..|..-|.+.|+++.++.-|
T Consensus 3 G~lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~~p 40 (209)
T d1nn5a_ 3 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 40 (209)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 356776664 799999999999999999999765444
No 37
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.08 E-value=1.4 Score=33.98 Aligned_cols=37 Identities=27% Similarity=0.392 Sum_probs=28.9
Q ss_pred cEEEEcCC--CCchHHHHHHHHHHHHcCCCeEE-ecCCcc
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSILRAEGYSVGC-YTSPHI 131 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~-~tSp~l 131 (353)
+.|.|||. .||||++..+...|...|.++.. +++|+.
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~~~~v~~~~~~~~~ 41 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVR 41 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHTTCCCEEEECCEEE
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 45888887 57999999999999998887744 455543
No 38
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.82 E-value=2.3 Score=37.08 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=20.8
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHH
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRA 118 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~ 118 (353)
.-+|||+|. .||||++..|...|.+
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~L~~ 53 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNHLME 53 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred CEEEEeECCCCCCHHHHHHHHHHHHHH
Confidence 458999997 8999999988777755
No 39
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=72.38 E-value=1.6 Score=35.38 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=27.7
Q ss_pred cEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEec
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYT 127 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~t 127 (353)
+.|.|-|- .||||.+..|..-|.+.|+++..++
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~~~g~~~~~~~ 37 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFT 37 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhCCCCeEEEe
Confidence 56777775 6899999999999999999876554
No 40
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=71.58 E-value=1 Score=37.37 Aligned_cols=27 Identities=30% Similarity=0.448 Sum_probs=20.5
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcCCCe
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEGYSV 123 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~v 123 (353)
+++|+|||. .||||++.+|.. ..|+.+
T Consensus 1 M~iIgiTG~igSGKsTva~~l~e---~~g~~~ 29 (241)
T d1deka_ 1 MKLIFLSGVKRSGKDTTADFIMS---NYSAVK 29 (241)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHH---HSCEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHH---hCCCeE
Confidence 368999997 899999988743 356543
No 41
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=70.37 E-value=1.7 Score=37.28 Aligned_cols=32 Identities=38% Similarity=0.550 Sum_probs=28.7
Q ss_pred CcEEEEcC----CCCchHHHHHHHHHHHHcCCCeEE
Q 018577 94 FKTVHIAG----TKGKGSTAAFLSSILRAEGYSVGC 125 (353)
Q Consensus 94 ~~vI~VtG----TnGKtSTt~ml~~IL~~~G~~vg~ 125 (353)
.|.|-||| +=|||-|++-|..+|+..|++|..
T Consensus 3 tkyifvtGGV~S~lGKGi~~aSig~llk~~g~~V~~ 38 (266)
T d1s1ma2 3 TNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTI 38 (266)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEE
T ss_pred ceEEEEeCCcccccchHHHHHHHHHHHHhCCceeEE
Confidence 57888998 579999999999999999999865
No 42
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=70.08 E-value=1.8 Score=37.38 Aligned_cols=33 Identities=42% Similarity=0.583 Sum_probs=29.0
Q ss_pred CcEEEEcCC----CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 94 FKTVHIAGT----KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 94 ~~vI~VtGT----nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
.|.|-|||. =|||-+++-|..+|+..|++|...
T Consensus 2 ~kyifvtGGV~S~lGKGi~~asig~ll~~~g~~v~~~ 38 (272)
T d1vcoa2 2 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAI 38 (272)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEE
T ss_pred ceEEEEeCCcccccccHHHHHHHHHHHHhCCCceeEE
Confidence 467889984 799999999999999999998653
No 43
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=69.49 E-value=1.4 Score=35.01 Aligned_cols=25 Identities=44% Similarity=0.707 Sum_probs=19.7
Q ss_pred cEEEEcCC--CCchHHHHHHHHHHHHcCCCe
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSILRAEGYSV 123 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL~~~G~~v 123 (353)
-+|||||. .||||++.+| ++.|+++
T Consensus 4 ~IIgitG~~gSGKstva~~l----~~~g~~~ 30 (191)
T d1uf9a_ 4 IIIGITGNIGSGKSTVAALL----RSWGYPV 30 (191)
T ss_dssp EEEEEEECTTSCHHHHHHHH----HHTTCCE
T ss_pred EEEEEECCCCCCHHHHHHHH----HHCCCeE
Confidence 47999997 7899888764 5678876
No 44
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.58 E-value=3.8 Score=31.89 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=28.7
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
+..+|-++|. .||||++..|+..|...++.+..+
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~l~~~~~~~~~~ 53 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTL 53 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCccch
Confidence 4568889997 689999999999999988877654
No 45
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=67.47 E-value=1.5 Score=33.67 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=21.3
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHH
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRA 118 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~ 118 (353)
.++|.++|. .||||++..|+..|..
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~~ 29 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLPE 29 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcCC
Confidence 478999997 7899999999998753
No 46
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=62.70 E-value=1.1 Score=38.15 Aligned_cols=29 Identities=24% Similarity=0.391 Sum_probs=20.0
Q ss_pred CCCcEEEEcCCCCchHHH-HHHHHHHHHcCC
Q 018577 92 SKFKTVHIAGTKGKGSTA-AFLSSILRAEGY 121 (353)
Q Consensus 92 ~~~~vI~VtGTnGKtSTt-~ml~~IL~~~G~ 121 (353)
..+.|+|.+|| |||||. .-++.++...|.
T Consensus 15 ~~~lI~g~aGT-GKTt~l~~rv~~ll~~~~~ 44 (306)
T d1uaaa1 15 GPCLVLAGAGS-GKTRVITNKIAHLIRGCGY 44 (306)
T ss_dssp SEEEECCCTTS-CHHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEeeCCc-cHHHHHHHHHHHHHHhcCC
Confidence 34567777776 999885 456777776664
No 47
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=61.88 E-value=2 Score=40.47 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=22.2
Q ss_pred CCCCcEEEEcCCCCchHHH-HHHHHHHHHcCC
Q 018577 91 HSKFKTVHIAGTKGKGSTA-AFLSSILRAEGY 121 (353)
Q Consensus 91 ~~~~~vI~VtGTnGKtSTt-~ml~~IL~~~G~ 121 (353)
+.++-|++.+|| |||||. .-++.+|...|.
T Consensus 24 ~~~~lV~A~AGS-GKT~~lv~ri~~ll~~~~~ 54 (623)
T g1qhh.1 24 EGPLLIMAGAGS-GKTRVLTHRIAYLMAEKHV 54 (623)
T ss_dssp SSCEEEEECTTS-CHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEeCch-HHHHHHHHHHHHHHHcCCC
Confidence 455788999999 999987 456677766554
No 48
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=61.83 E-value=2.3 Score=32.49 Aligned_cols=27 Identities=26% Similarity=0.343 Sum_probs=20.5
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcCCCe
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEGYSV 123 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~v 123 (353)
++.|.|+|. .||||++..|+.-| |+.+
T Consensus 4 ~~~I~i~G~pGsGKTTia~~La~~l---~~~~ 32 (173)
T d1rkba_ 4 LPNILLTGTPGVGKTTLGKELASKS---GLKY 32 (173)
T ss_dssp CCCEEEECSTTSSHHHHHHHHHHHH---CCEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH---CCcE
Confidence 456778886 78999999998655 6554
No 49
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=61.33 E-value=1.9 Score=32.36 Aligned_cols=22 Identities=23% Similarity=0.474 Sum_probs=17.9
Q ss_pred cEEEEcCC--CCchHHHHHHHHHH
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL 116 (353)
+.|.++|. .||||++.+|+.-|
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L 26 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQL 26 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHh
Confidence 45777786 68999999999876
No 50
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=61.21 E-value=1.7 Score=33.36 Aligned_cols=23 Identities=35% Similarity=0.437 Sum_probs=19.5
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHH
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL 116 (353)
.+.|.|+|+ .||||.+..|+.-|
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHh
Confidence 478999996 78999999988865
No 51
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=60.61 E-value=2.4 Score=36.50 Aligned_cols=35 Identities=17% Similarity=0.426 Sum_probs=25.0
Q ss_pred HHHHHHHHHcCCCCCCCcEEEEcC--CCCchHHHHHH
Q 018577 78 GRMNRLMDRLGNPHSKFKTVHIAG--TKGKGSTAAFL 112 (353)
Q Consensus 78 ~r~~~~l~~lg~p~~~~~vI~VtG--TnGKtSTt~ml 112 (353)
+++..+++.+++..-.+|-|+|.| +.||||....|
T Consensus 8 n~l~d~~~~~~~~~~~lP~ivVvG~~ssGKSSliNaL 44 (306)
T d1jwyb_ 8 NKLQDVFNTLGSDPLDLPQIVVVGSQSSGKSSVLENI 44 (306)
T ss_dssp HHHHHHTTTSSSCTTCCCEEEEEECSSSSHHHHHHHH
T ss_pred HHHHHHHHHhCcCCCCCCeEEEEeCCCCCHHHHHHHH
Confidence 345555666776666778899999 59999865544
No 52
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=60.51 E-value=3 Score=35.61 Aligned_cols=35 Identities=17% Similarity=0.383 Sum_probs=24.4
Q ss_pred HHHHHHHHHcCCCC-CCCcEEEEcC--CCCchHHHHHH
Q 018577 78 GRMNRLMDRLGNPH-SKFKTVHIAG--TKGKGSTAAFL 112 (353)
Q Consensus 78 ~r~~~~l~~lg~p~-~~~~vI~VtG--TnGKtSTt~ml 112 (353)
+++...+..||..+ -.+|-|.|.| +.||||....|
T Consensus 9 ~~l~d~l~~lg~~~~~~~P~ivvvG~~SsGKSsliNaL 46 (299)
T d2akab1 9 NRLQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENF 46 (299)
T ss_dssp HHHHHHHTTSCCCTTCCCCEEEEEEBTTSCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCeEEEEcCCCCCHHHHHHHH
Confidence 45666667777443 3567799999 69999866554
No 53
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=57.50 E-value=5.6 Score=31.29 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=27.2
Q ss_pred cEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEec
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYT 127 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~t 127 (353)
.+|.+.|- .||||++..|+.-|...|+++..++
T Consensus 3 ~li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~ 37 (213)
T d1bifa1 3 TLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFN 37 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEc
Confidence 35666674 7999999999999999999987654
No 54
>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]}
Probab=54.86 E-value=7.1 Score=36.69 Aligned_cols=47 Identities=23% Similarity=0.263 Sum_probs=35.4
Q ss_pred CCChHHHHHHHHHcCCCCCCCcEEEEcCCC------CchHHHHHHHHHHHHcCCCeEE
Q 018577 74 GFDLGRMNRLMDRLGNPHSKFKTVHIAGTK------GKGSTAAFLSSILRAEGYSVGC 125 (353)
Q Consensus 74 ~~~l~r~~~~l~~lg~p~~~~~vI~VtGTn------GKtSTt~ml~~IL~~~G~~vg~ 125 (353)
+.+|+ +++++.. ..+-+.|-||+.+ |||||+-=|.+.|...|+++..
T Consensus 36 Kv~~~----~~~~~~~-~~~gklilVTaitPTp~GEGKtTttiGL~~aL~~lgk~~~~ 88 (549)
T d1eg7a_ 36 KISLD----VYRRLKD-KPDGKLILVTAITPTPAGEGKTTTSVGLTDALARLGKRVMV 88 (549)
T ss_dssp EECTH----HHHHHTT-SCCCEEEEEEESSCCTTCCCHHHHHHHHHHHHHHTTCCEEE
T ss_pred EecHH----HHHhhcc-CCCceEEEEEeCCCCCCCCCcceeHHhHHHHHHHhCCceEE
Confidence 35565 4444532 2246789999975 9999999999999999999865
No 55
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=50.76 E-value=34 Score=26.63 Aligned_cols=62 Identities=11% Similarity=0.159 Sum_probs=43.2
Q ss_pred ChHHHHHHHHH----cCCCCCCCcEEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHH
Q 018577 76 DLGRMNRLMDR----LGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKA 151 (353)
Q Consensus 76 ~l~r~~~~l~~----lg~p~~~~~vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~ 151 (353)
+++.++..++. -|++. .-+++.-|..|-+.=..+++..|+..|+.|.. . |...++++
T Consensus 19 ~~e~lr~~~~~~~~~~gr~p--kVlla~~g~D~Hd~G~~~va~~l~~~G~eVi~---------------l--g~~~~~e~ 79 (168)
T d7reqa2 19 EVEEARELVEEFEQAEGRRP--RILLAKMGQDGHDRGQKVIATAYADLGFDVDV---------------G--PLFQTPEE 79 (168)
T ss_dssp HHHHHHHHHHHHHHHHSSCC--EEEEECBTTCCCCHHHHHHHHHHHHTTCEEEE---------------C--CTTBCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCC--eEEEEeCCccHHHHHHHHHHHHHHhCCcceec---------------C--CCcCcHHH
Confidence 34444444443 35532 12578889999999999999999999999842 2 77778877
Q ss_pred HHHHH
Q 018577 152 LNCLF 156 (353)
Q Consensus 152 ~~~~~ 156 (353)
+.+..
T Consensus 80 iv~aa 84 (168)
T d7reqa2 80 TARQA 84 (168)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 56
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=46.23 E-value=5.4 Score=33.89 Aligned_cols=30 Identities=13% Similarity=0.201 Sum_probs=19.9
Q ss_pred CCCCCcEEEEcCCCCchHHHH-HHHHHHHHcC
Q 018577 90 PHSKFKTVHIAGTKGKGSTAA-FLSSILRAEG 120 (353)
Q Consensus 90 p~~~~~vI~VtGTnGKtSTt~-ml~~IL~~~G 120 (353)
+...+-|+|.+|| |||||.. -++.+|...+
T Consensus 23 ~~g~~lV~g~aGS-GKTt~l~~ri~~ll~~~~ 53 (318)
T d1pjra1 23 TEGPLLIMAGAGS-GKTRVLTHRIAYLMAEKH 53 (318)
T ss_dssp CSSCEEEEECTTS-CHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecCCc-cHHHHHHHHHHHHHHcCC
Confidence 4445678888887 9998763 3556666543
No 57
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=46.11 E-value=6.3 Score=31.25 Aligned_cols=23 Identities=26% Similarity=0.459 Sum_probs=20.0
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHH
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL 116 (353)
.|+|+|-|. .||||.+..|+.=|
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~~ 27 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEAL 27 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHh
Confidence 479999996 79999999998766
No 58
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=45.94 E-value=4.7 Score=30.31 Aligned_cols=22 Identities=36% Similarity=0.419 Sum_probs=18.0
Q ss_pred cEEEEcCC--CCchHHHHHHHHHH
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL 116 (353)
++|.|+|- .||||++..|+.-|
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~ 26 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQL 26 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHc
Confidence 57888886 79999999888655
No 59
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.67 E-value=1.2 Score=36.57 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=24.1
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHHHHcCC
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSILRAEGY 121 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~ 121 (353)
+.|.|+|-|- .||||.+.+|+.-|...|+
T Consensus 1 ~~k~I~ieG~dGsGKST~~~~L~~~l~~~~~ 31 (241)
T d1p5zb_ 1 RIKKISIEGNIAAGKSTFVNILKQLCEDWEV 31 (241)
T ss_dssp CCEEEEEECSTTSSHHHHHTTTGGGCTTEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 3688999995 8999999999998876554
No 60
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=44.14 E-value=6.7 Score=31.33 Aligned_cols=21 Identities=24% Similarity=0.472 Sum_probs=18.4
Q ss_pred EEEEcCC--CCchHHHHHHHHHH
Q 018577 96 TVHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 96 vI~VtGT--nGKtSTt~ml~~IL 116 (353)
+|+|.|. .||||.|.+|+.=|
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~l 27 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDF 27 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 5889896 89999999999866
No 61
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=43.90 E-value=6.8 Score=29.65 Aligned_cols=25 Identities=36% Similarity=0.424 Sum_probs=19.4
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHHH
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSILR 117 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL~ 117 (353)
+...|.|+|. .||||++..|+.-|.
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~ 30 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELD 30 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHhC
Confidence 3356888896 689999999987653
No 62
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=42.61 E-value=8.3 Score=29.06 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=20.2
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHHH
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSILR 117 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL~ 117 (353)
+.++|.++|- .||||++..|+.-|.
T Consensus 5 ~~~iivl~G~~GsGKsT~a~~La~~l~ 31 (171)
T d1knqa_ 5 DHHIYVLMGVSGSGKSAVASEVAHQLH 31 (171)
T ss_dssp TSEEEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567778885 799999999998873
No 63
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=41.84 E-value=7.5 Score=31.84 Aligned_cols=31 Identities=26% Similarity=0.522 Sum_probs=24.2
Q ss_pred CCcEEEEcC--CCCchHHHHHHHHHHHH-cCCCeEEe
Q 018577 93 KFKTVHIAG--TKGKGSTAAFLSSILRA-EGYSVGCY 126 (353)
Q Consensus 93 ~~~vI~VtG--TnGKtSTt~ml~~IL~~-~G~~vg~~ 126 (353)
++|+..||| -.|||| +|.++|++ .|+|+++.
T Consensus 2 ~iPv~iitGFLGaGKTT---ll~~lL~~~~~~riaVI 35 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTT---LLRHILNEQHGYKIAVI 35 (222)
T ss_dssp CEEEEEEEESSSSSCHH---HHHHHHHSCCCCCEEEE
T ss_pred CCCEEEEeeCCCCCHHH---HHHHHHhcCCCCcEEEE
Confidence 578999999 588987 57888875 47888775
No 64
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=41.53 E-value=41 Score=29.70 Aligned_cols=35 Identities=17% Similarity=0.178 Sum_probs=22.9
Q ss_pred cEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEecCC
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYTSP 129 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~tSp 129 (353)
-.|-|||. .|||||.+-+-.-+...+.++...-.|
T Consensus 159 GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdP 195 (401)
T d1p9ra_ 159 GIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDP 195 (401)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESS
T ss_pred ceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccC
Confidence 57888986 688888765544444445666655554
No 65
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=41.28 E-value=8 Score=30.26 Aligned_cols=25 Identities=32% Similarity=0.411 Sum_probs=20.0
Q ss_pred CCCcEEEEcCC--CCchHHHHHHHHHH
Q 018577 92 SKFKTVHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 92 ~~~~vI~VtGT--nGKtSTt~ml~~IL 116 (353)
.+.++|.|-|. .||||.+..|+.-+
T Consensus 4 ~kp~iI~i~G~pGSGKsT~a~~La~~~ 30 (194)
T d1qf9a_ 4 SKPNVVFVLGGPGSGKGTQCANIVRDF 30 (194)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 34578888886 79999999998754
No 66
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=41.19 E-value=49 Score=29.01 Aligned_cols=47 Identities=13% Similarity=0.123 Sum_probs=36.2
Q ss_pred ChHHHHHHHHHcCCCCCCCcEEEEcCCC--CchHHHHHHHHHHHHcCCCeEEe
Q 018577 76 DLGRMNRLMDRLGNPHSKFKTVHIAGTK--GKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 76 ~l~r~~~~l~~lg~p~~~~~vI~VtGTn--GKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
.++++...++.+|. -+++-|||.+ -|+....-+...|+++|..+..|
T Consensus 21 ~~~~l~~~l~~~g~----~rvliVt~~~~~~~~g~~~~l~~~L~~~gi~~~~f 69 (398)
T d1vlja_ 21 TIPKIGEEIKNAGI----RKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEV 69 (398)
T ss_dssp CGGGHHHHHHHTTC----CEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCC----CeEEEEECCcHHHHhhHHHHHHHHHHhcCCeEEEE
Confidence 58889999999983 2677888765 35556778888999999888765
No 67
>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]}
Probab=40.96 E-value=20 Score=29.65 Aligned_cols=35 Identities=11% Similarity=0.101 Sum_probs=25.5
Q ss_pred CCCCcEEEEcCCCCchHHHHHHHH----HHHHcCCCeEE
Q 018577 91 HSKFKTVHIAGTKGKGSTAAFLSS----ILRAEGYSVGC 125 (353)
Q Consensus 91 ~~~~~vI~VtGTnGKtSTt~ml~~----IL~~~G~~vg~ 125 (353)
+...|++.|.||+-|.|.+..+.. .|++.|..+-+
T Consensus 32 ~~~~KIl~I~GS~R~~s~s~~la~~~~~~l~~~G~ev~~ 70 (233)
T d2fzva1 32 APPVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRI 70 (233)
T ss_dssp CSCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEeCCCCCCCHHHHHHHHHHHHhhhcCeEEEE
Confidence 345699999999999987755543 45667877654
No 68
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=40.00 E-value=7.4 Score=29.78 Aligned_cols=20 Identities=25% Similarity=0.378 Sum_probs=15.9
Q ss_pred EEEcCC--CCchHHHHHHHHHH
Q 018577 97 VHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 97 I~VtGT--nGKtSTt~ml~~IL 116 (353)
|.++|. .||||++.+|+.-|
T Consensus 4 IvliG~~G~GKSTig~~La~~l 25 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKAL 25 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 334465 69999999999888
No 69
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=39.75 E-value=16 Score=31.99 Aligned_cols=45 Identities=20% Similarity=0.379 Sum_probs=30.5
Q ss_pred hHHHHHHHHHcCCCCCCCcEEEEcCCCC--chHHHHHHHHHHHHcCCCeEEe
Q 018577 77 LGRMNRLMDRLGNPHSKFKTVHIAGTKG--KGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 77 l~r~~~~l~~lg~p~~~~~vI~VtGTnG--KtSTt~ml~~IL~~~G~~vg~~ 126 (353)
++++..+++.+|. +++-|+|.+. |+-...-+...|.+.|..+..|
T Consensus 17 l~~l~~~~~~~g~-----k~liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f 63 (359)
T d1o2da_ 17 LEKRGNIIDLLGK-----RALVVTGKSSSKKNGSLDDLKKLLDETEISYEIF 63 (359)
T ss_dssp HHHHGGGGGGTCS-----EEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCC-----eEEEEEcCcHHHHhhHHHHHHHHHHHcCCeEEEE
Confidence 6666666666652 5677776543 3446678888899999877655
No 70
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=39.41 E-value=36 Score=25.41 Aligned_cols=44 Identities=9% Similarity=0.093 Sum_probs=31.8
Q ss_pred EEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHH
Q 018577 96 TVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLF 156 (353)
Q Consensus 96 vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~ 156 (353)
+++..+..+=.-=..|++.+|+..|++|-.. |...+.+++.++.
T Consensus 7 vi~~~~gD~H~lG~~mva~~l~~~G~~V~~L-----------------G~~~p~e~iv~a~ 50 (137)
T d1ccwa_ 7 VLGVIGSDCHAVGNKILDHAFTNAGFNVVNI-----------------GVLSPQELFIKAA 50 (137)
T ss_dssp EEEEETTCCCCHHHHHHHHHHHHTTCEEEEE-----------------EEEECHHHHHHHH
T ss_pred EEEecCCChhHHHHHHHHHHHHHCCCeEEec-----------------ccccCHHHHHHHH
Confidence 4556666555556789999999999998542 6677777765554
No 71
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=38.50 E-value=50 Score=24.25 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=32.4
Q ss_pred hHHHHHHHHHcCCCCCCCcEEEEcCCCC-chHHHHHHHHHHHHcCCCe
Q 018577 77 LGRMNRLMDRLGNPHSKFKTVHIAGTKG-KGSTAAFLSSILRAEGYSV 123 (353)
Q Consensus 77 l~r~~~~l~~lg~p~~~~~vI~VtGTnG-KtSTt~ml~~IL~~~G~~v 123 (353)
...++..++.+.....+-+.+++-||.| -+.....+...|...|.++
T Consensus 69 ~~~~~~~l~~~~~~~~~~k~~~~fgs~g~~~~a~~~~~~~l~~~g~~~ 116 (152)
T d1e5da1 69 LPYVAGTLQYIKGLRPQNKIGGAFGSFGWSGESTKVLAEWLTGMGFDM 116 (152)
T ss_dssp CHHHHHHHHHHHHTCCCSCEEEEEEEESSSCHHHHHHHHHHHHTTCBC
T ss_pred CchhHHHHHHhhccCCCCCEEEEEEeeCCCCccHHHHHHHHHHCCCEE
Confidence 4556777766643333456777778766 3456688899999999875
No 72
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=37.99 E-value=4.4 Score=31.92 Aligned_cols=24 Identities=25% Similarity=0.221 Sum_probs=19.1
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHH
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL 116 (353)
+..+|+|.|. .||||.+..|+.-|
T Consensus 8 kp~~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 8 QPFTVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp CCEEEEEECSTTSCHHHHHHTTGGGT
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHh
Confidence 3348999996 89999998887655
No 73
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=36.49 E-value=9.5 Score=29.25 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=15.7
Q ss_pred EEEcCC--CCchHHHHHHHHHH
Q 018577 97 VHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 97 I~VtGT--nGKtSTt~ml~~IL 116 (353)
|.++|. .||||++..|+.-|
T Consensus 5 Iil~G~~GsGKSTia~~LA~~L 26 (170)
T d1e6ca_ 5 IFMVGARGCGMTTVGRELARAL 26 (170)
T ss_dssp EEEESCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 445564 69999999999777
No 74
>d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=35.98 E-value=7.9 Score=22.99 Aligned_cols=37 Identities=11% Similarity=0.065 Sum_probs=31.3
Q ss_pred CCCccchhhhcccccccccccCCCCCccHHHHHHHHH
Q 018577 17 SPTSRGYFKKFSIGSKSCFFSTSSEEPELMNFMNYLD 53 (353)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 53 (353)
+|..|.+.+..-+.-+.+..++.....+=+|.++|+.
T Consensus 2 SP~arkla~e~gidl~~i~GtG~~GRI~k~Dv~~~i~ 38 (39)
T d2cyua1 2 SPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLA 38 (39)
T ss_dssp CCTHHHHHHHHTCCGGGSCCCSSSSCCCHHHHHHHSC
T ss_pred CHHHHHHHHHcCCCHHHCcCCCCCCcEeHHHHHHHHc
Confidence 6999999999999888888888888888788887764
No 75
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.68 E-value=5.2 Score=32.57 Aligned_cols=27 Identities=19% Similarity=0.240 Sum_probs=22.6
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcC
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEG 120 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G 120 (353)
.+.|.|-|. .||||.+.+|+.-|...+
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~ 30 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWH 30 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcC
Confidence 468899995 899999999999887654
No 76
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.96 E-value=6.7 Score=31.85 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=23.5
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHHHHcCC
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSILRAEGY 121 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~ 121 (353)
+-+.|.|-|- .||||.+.+|+.-|+..|+
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L~~~~~ 32 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKLQPNCK 32 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHTTTSEE
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHHHHhCCE
Confidence 3467888885 7999999999999987553
No 77
>d1j33a_ c.39.1.1 (A:) Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) {Thermus thermophilus [TaxId: 274]}
Probab=33.82 E-value=80 Score=27.26 Aligned_cols=160 Identities=16% Similarity=0.227 Sum_probs=88.2
Q ss_pred HHHHHHHHHhchhhhhcCCCCCCCCCCCCCCChHHHHHHHHHc----CC--CC-CCCcEEEEcCCCC----------chH
Q 018577 45 LMNFMNYLDSLKNFEKSGVPKGAGTDSDDGFDLGRMNRLMDRL----GN--PH-SKFKTVHIAGTKG----------KGS 107 (353)
Q Consensus 45 ~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~l~r~~~~l~~l----g~--p~-~~~~vI~VtGTnG----------KtS 107 (353)
++++.+.++++. +|+| +|.+++.+..+| |. |. .+..++..+|-|| +..
T Consensus 4 ~~~a~~r~d~lt------KP~g---------sLG~LE~la~~la~~qg~~~p~~~~~~~~vfaaDHGV~~egVSa~p~ev 68 (333)
T d1j33a_ 4 FAQARLRMDQLT------KPPR---------ALGYLEEVALRLAALQGRVKPELGRGAVVVAAADHGVVAEGVSAYPQEV 68 (333)
T ss_dssp HHHHHHHHTTBS------SCTT---------TTHHHHHHHHHHHHHHTCSSCCCCCEEEEEEEECCGGGGGCCCSSCTTH
T ss_pred HHHHHHHHHccC------CCCc---------chHHHHHHHHHHHHHhCCCCCCCCCCeEEEEeCCCccccCCCCCCCHHH
Confidence 456666666655 2442 577877777775 33 32 3456788889876 678
Q ss_pred HHHHHHHHHHH----------cCCC-----eEEe----cCCcccccceeeeeC--C--CCcccCHHHHHHHHHHHHHHHH
Q 018577 108 TAAFLSSILRA----------EGYS-----VGCY----TSPHIKTIRERMNVG--R--LNRPVSAKALNCLFHKIKGVLD 164 (353)
Q Consensus 108 Tt~ml~~IL~~----------~G~~-----vg~~----tSp~l~~~~eri~in--~--~G~~is~~~~~~~~~~i~~~~~ 164 (353)
|..|+..++.- +|.+ +|+- -.|.+. +.++..+ | .+--+|++++.+.++.=.+..+
T Consensus 69 T~~~v~n~~~G~aai~~la~~~g~~l~VVD~Gv~~~~~~~~~~~--~~kv~~GT~n~~~~pAMt~~e~~~al~~G~~~a~ 146 (333)
T d1j33a_ 69 TRQMVLNFLRGGAAINQFALAADCAVYVLDVGVVGELPDHPGLL--KRKVRPGTANLAQGPAMTPEEAERALLAGREAAR 146 (333)
T ss_dssp HHHHHHHHHHTCSHHHHHHHHTTEEEEEEEEECSSCCCCCTTEE--ECCCSSSCCCTTSSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHHHcCCceEEEeccccCCCcCCcchh--hhhhccCcCCcccCCCCCHHHHHHHHHHHHHHHH
Confidence 88998888753 3322 2221 112221 2222221 1 1345677776666543222221
Q ss_pred HHHhhcCCccChhHHHHHHHHHHHhhCCCCEEE-EeecCCCcccccccccccCCcEEEEccCChhhHhhhCC-CHHHHHH
Q 018577 165 EAIRLENGCITHFEVLTAMAFALFAQNHVDIAV-IEAGLGGARDATNIISSSGLAASVITTIGEEHTAALGG-SLETIAM 242 (353)
Q Consensus 165 ~~~~~~~~~~t~FE~~t~~a~~~f~~~~~d~~V-lEvG~gg~~D~tn~v~~~~p~vaVITnI~~DHl~~lG~-tle~ia~ 242 (353)
+ ..+.++|+++ =|+|.|..--+.-+ ++++|++..+..---|. .-++-.+
T Consensus 147 ~----------------------~~~~G~~ll~~GEmGiGNTT~AaAi-------~~aL~g~~~~~~vG~Gtg~~~~~~~ 197 (333)
T d1j33a_ 147 R----------------------AIAEGATLLAAGDMGIGNTTAAAAL-------TAALLGLPPEAVVGRGTGVGEEGLR 197 (333)
T ss_dssp H----------------------HHHTTCSEEEEEEECTTHHHHHHHH-------HHHHHTCCHHHHCCCTTTCCHHHHH
T ss_pred H----------------------HHhCCCCEEEeccccCCccHHHHHH-------HHHHhCcCHHHHccCCCCCCHHHHH
Confidence 1 3467888766 58998875433332 45688888876543341 2234455
Q ss_pred HHHhcccC
Q 018577 243 AKSGIIKY 250 (353)
Q Consensus 243 ~Ka~Iik~ 250 (353)
.|..+++.
T Consensus 198 ~K~~vi~~ 205 (333)
T d1j33a_ 198 RKRQAVAR 205 (333)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67776654
No 78
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.71 E-value=11 Score=29.39 Aligned_cols=24 Identities=21% Similarity=0.364 Sum_probs=20.6
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHH
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL 116 (353)
+.++|.|.|- .||||.+.+|+.-|
T Consensus 7 ~~~iI~i~GppGSGKsT~a~~La~~~ 32 (196)
T d1ukza_ 7 QVSVIFVLGGPGAGKGTQCEKLVKDY 32 (196)
T ss_dssp TCEEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 5789999996 89999999998755
No 79
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=33.63 E-value=31 Score=27.48 Aligned_cols=44 Identities=23% Similarity=0.389 Sum_probs=29.3
Q ss_pred hHHHHHHHHH-cCCCCCCCcEEEEcCC--CCchHHHHHHHHHHHHcC
Q 018577 77 LGRMNRLMDR-LGNPHSKFKTVHIAGT--KGKGSTAAFLSSILRAEG 120 (353)
Q Consensus 77 l~r~~~~l~~-lg~p~~~~~vI~VtGT--nGKtSTt~ml~~IL~~~G 120 (353)
++.+..+++. +.+|....+.+-|.|- .|||+++..++..|...+
T Consensus 25 i~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~ 71 (276)
T d1fnna2 25 LQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKT 71 (276)
T ss_dssp HHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHHHhccc
Confidence 4445555543 2345555666777774 699999999998886543
No 80
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=33.06 E-value=8.9 Score=28.91 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=19.2
Q ss_pred CcEEEEcCC--CCchHHHHHHHHHHHHcCCCe
Q 018577 94 FKTVHIAGT--KGKGSTAAFLSSILRAEGYSV 123 (353)
Q Consensus 94 ~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~v 123 (353)
-++|.++|- .||||++..|+. ..|.+.
T Consensus 4 g~iI~l~G~~GsGKSTia~~La~---~lg~~~ 32 (176)
T d1zp6a1 4 GNILLLSGHPGSGKSTIAEALAN---LPGVPK 32 (176)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHT---CSSSCE
T ss_pred CeEEEEECCCCCCHHHHHHHHHH---HhCCCE
Confidence 467888885 689999887754 345554
No 81
>d1w85i_ a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=32.87 E-value=6.8 Score=23.73 Aligned_cols=39 Identities=10% Similarity=0.095 Sum_probs=33.1
Q ss_pred eeCCCccchhhhcccccccccccCCCCCccHHHHHHHHH
Q 018577 15 FYSPTSRGYFKKFSIGSKSCFFSTSSEEPELMNFMNYLD 53 (353)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 53 (353)
+.+|..|.+.+..-+.-+.+..++.....+-+|.++|+.
T Consensus 3 ~asP~arkla~e~gidl~~i~GTG~~GRItk~DV~~~i~ 41 (42)
T d1w85i_ 3 IAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLA 41 (42)
T ss_dssp CCCHHHHHHHHHTTCCTTTSCCCSGGGCCCHHHHHHHHC
T ss_pred ccCHHHHHHHHHcCCCHHHCccCCCCCcEeHHHHHHHhC
Confidence 467999999999999999988888777888888888874
No 82
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=32.82 E-value=17 Score=28.82 Aligned_cols=30 Identities=27% Similarity=0.406 Sum_probs=22.4
Q ss_pred EEEEcCC--CCchHHHHHHHHHHHHcCCCeEEe
Q 018577 96 TVHIAGT--KGKGSTAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 96 vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~ 126 (353)
||.|+|- .||||...-|.+-+. .+++++..
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~-~~~~~~iv 33 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLE-DNYKVAYV 33 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHT-TTSCEEEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHh-hCCeEEEE
Confidence 6899996 899998866665554 57777764
No 83
>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=32.72 E-value=30 Score=26.55 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=31.9
Q ss_pred EEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHHH
Q 018577 96 TVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFH 157 (353)
Q Consensus 96 vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~~ 157 (353)
+|+..+-.+=.-=..|++.+|+..|++|.. +|..++++++.++..
T Consensus 10 vi~tv~gD~HdiG~~iv~~~l~~~G~~Vi~-----------------LG~~~p~e~~~~~~~ 54 (156)
T d3bula2 10 VIATVKGDVHDIGKNIVGVVLQCNNYEIVD-----------------LGVMVPAEKILRTAK 54 (156)
T ss_dssp EEEEBTTCCCCHHHHHHHHHHHTTTCEEEE-----------------CCSSBCHHHHHHHHH
T ss_pred EEEeeCCChhhHHHHHHHHHHHHCCCEEEE-----------------CCCCCCHHHHHHHHH
Confidence 345555444455568999999999999853 388888888766553
No 84
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}
Probab=30.85 E-value=89 Score=23.99 Aligned_cols=53 Identities=9% Similarity=0.106 Sum_probs=38.8
Q ss_pred CCCcEEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHHHHHHHHHHHH
Q 018577 92 SKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEA 166 (353)
Q Consensus 92 ~~~~vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~~~i~~~~~~~ 166 (353)
++++.|+|-|+ |+..+-|+..+..+|++|-+| + ++++.+.+..+.+...+...
T Consensus 2 ~~I~~vaViGa---G~mG~~iA~~~a~~G~~V~l~--------------D-----~~~~~l~~~~~~i~~~l~~~ 54 (186)
T d1wdka3 2 KDVKQAAVLGA---GIMGGGIAYQSASKGTPILMK--------------D-----INEHGIEQGLAEAAKLLVGR 54 (186)
T ss_dssp CCCSSEEEECC---HHHHHHHHHHHHHTTCCEEEE--------------C-----SSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECc---CHHHHHHHHHHHhCCCeEEEE--------------E-----CCHHHHhhhhhhhhhhHHhh
Confidence 45778999988 889899999999999999774 2 34555666666665555443
No 85
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=30.38 E-value=14 Score=28.08 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=15.9
Q ss_pred EEEcCC--CCchHHHHHHHHHH
Q 018577 97 VHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 97 I~VtGT--nGKtSTt~ml~~IL 116 (353)
|.+.|. .||||++.+|+.-|
T Consensus 3 I~liG~~GsGKsTi~k~La~~l 24 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDL 24 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 444454 69999999999988
No 86
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}
Probab=29.12 E-value=91 Score=22.12 Aligned_cols=36 Identities=19% Similarity=0.414 Sum_probs=27.0
Q ss_pred CcEEEEcC-CCCchHHHHHHHHHHHHcCCCeEEecCCc
Q 018577 94 FKTVHIAG-TKGKGSTAAFLSSILRAEGYSVGCYTSPH 130 (353)
Q Consensus 94 ~~vI~VtG-TnGKtSTt~ml~~IL~~~G~~vg~~tSp~ 130 (353)
+|.|+|-| |+-.++....+.+-|.+.||++.. ..|.
T Consensus 1 ~KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~p-VnP~ 37 (116)
T d1y81a1 1 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLP-VNPN 37 (116)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEE-ECTT
T ss_pred CcEEEEEcccCCCCCcHHHHHHHHHHCCCEEEE-Eccc
Confidence 47888888 556688888888889999998643 3443
No 87
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.72 E-value=18 Score=27.98 Aligned_cols=22 Identities=27% Similarity=0.391 Sum_probs=18.2
Q ss_pred cEEEEcCC--CCchHHHHHHHHHH
Q 018577 95 KTVHIAGT--KGKGSTAAFLSSIL 116 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml~~IL 116 (353)
++|.|.|- .||||.+.+|+.-|
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~ 25 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKY 25 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh
Confidence 56788885 79999999998755
No 88
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=27.82 E-value=15 Score=28.72 Aligned_cols=52 Identities=21% Similarity=0.160 Sum_probs=33.4
Q ss_pred ChHHHHHHHHHcCC-----CCCCCcEEEEcCC--CCchHHHHHHHHHHHHcCCCeEEecCCcc
Q 018577 76 DLGRMNRLMDRLGN-----PHSKFKTVHIAGT--KGKGSTAAFLSSILRAEGYSVGCYTSPHI 131 (353)
Q Consensus 76 ~l~r~~~~l~~lg~-----p~~~~~vI~VtGT--nGKtSTt~ml~~IL~~~G~~vg~~tSp~l 131 (353)
+.+.+.++.+.++. ..++.-+|...|- .||||.++.+..-| |.+. ..+||-.
T Consensus 10 ~e~~t~~lg~~la~~l~~~~~~~g~ii~L~G~LGaGKTtfvr~~~~~l---g~~~-~V~SPTF 68 (158)
T d1htwa_ 10 DEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGI---GHQG-NVKSPTY 68 (158)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCSSCEEEEEECSTTSSHHHHHHHHHHHT---TCCS-CCCCCTT
T ss_pred CHHHHHHHHHHHHHHHHhccCCCCeEEEEecCCCccHHHHHHHHHhhc---cccc-ccCCCce
Confidence 55666666666553 1233458999996 78988777665554 6653 3589965
No 89
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=27.77 E-value=12 Score=29.15 Aligned_cols=29 Identities=34% Similarity=0.489 Sum_probs=23.5
Q ss_pred EEEcCCCCchHHHHHHHHHHHHc--CCCeEE
Q 018577 97 VHIAGTKGKGSTAAFLSSILRAE--GYSVGC 125 (353)
Q Consensus 97 I~VtGTnGKtSTt~ml~~IL~~~--G~~vg~ 125 (353)
|+|==-||||.||+.+...|+++ |++|.+
T Consensus 5 i~vytG~GKGKTTAAlG~alRA~G~G~rV~i 35 (157)
T d1g5ta_ 5 IIVFTGNGKGKTTAAFGTAARAVGHGKNVGV 35 (157)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEeCCCCCcHHHHHHHHHHHhcCCCEEEE
Confidence 55555699999999999999985 567765
No 90
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=27.37 E-value=23 Score=28.87 Aligned_cols=28 Identities=29% Similarity=0.334 Sum_probs=21.1
Q ss_pred cEEEEcCCC--CchHHHHH--HHHHHHHcCCC
Q 018577 95 KTVHIAGTK--GKGSTAAF--LSSILRAEGYS 122 (353)
Q Consensus 95 ~vI~VtGTn--GKtSTt~m--l~~IL~~~G~~ 122 (353)
+++-|||-| ||||...- +..+|.+.|.-
T Consensus 36 ~~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~ 67 (224)
T d1ewqa2 36 ELVLITGPNMAGKSTFLRQTALIALLAQVGSF 67 (224)
T ss_dssp CEEEEESCSSSSHHHHHHHHHHHHHHHTTTCC
T ss_pred cEEEEECCCccccchhhhhhHHHHHHHhccce
Confidence 478999999 99998764 44567777753
No 91
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=27.04 E-value=75 Score=22.51 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHcCCCeEEec
Q 018577 107 STAAFLSSILRAEGYSVGCYT 127 (353)
Q Consensus 107 STt~ml~~IL~~~G~~vg~~t 127 (353)
++...+..+|+..||+|-.+.
T Consensus 14 ~~~~~l~~~L~~~g~~v~~a~ 34 (123)
T d1krwa_ 14 SIRWVLERALAGAGLTCTTFE 34 (123)
T ss_dssp HHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHHCCCEEEEeC
Confidence 567888888988898886543
No 92
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=26.17 E-value=18 Score=26.41 Aligned_cols=18 Identities=28% Similarity=0.311 Sum_probs=13.5
Q ss_pred cEEEEcCC--CCchHHHHHH
Q 018577 95 KTVHIAGT--KGKGSTAAFL 112 (353)
Q Consensus 95 ~vI~VtGT--nGKtSTt~ml 112 (353)
++|.|+|- .||||++.-|
T Consensus 3 klIii~G~pGsGKTTla~~L 22 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREF 22 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 46788886 7899987643
No 93
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=25.94 E-value=63 Score=22.55 Aligned_cols=48 Identities=13% Similarity=0.109 Sum_probs=33.0
Q ss_pred CChHHHHHHHHHcCCCCCCCcEEEEcCCCCchHHHHHHHHHHHHcCCC-eEEe
Q 018577 75 FDLGRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYS-VGCY 126 (353)
Q Consensus 75 ~~l~r~~~~l~~lg~p~~~~~vI~VtGTnGKtSTt~ml~~IL~~~G~~-vg~~ 126 (353)
.+.+.+++.+..+|.. .+-++|...+| |.+++ ....+|+..||+ |-+|
T Consensus 65 ~~~~~~~~~~~~~g~~-~~~~ii~yC~s-G~~A~--~~~~~L~~lG~~~v~~y 113 (120)
T d1urha2 65 KTTDELDAIFFGRGVS-YDKPIIVSCGS-GVTAA--VVLLALATLDVPNVKLY 113 (120)
T ss_dssp CCHHHHHHHHHTTTCC-SSSCEEEECCS-SSTHH--HHHHHHHHTTCSSCEEE
T ss_pred CCHHHhhhhhhhcccC-ccCceEEEccc-hhHHH--HHHHHHHHcCCCCceEc
Confidence 3567788888888764 34578888886 66544 444568889985 6554
No 94
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=25.65 E-value=37 Score=26.94 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=25.8
Q ss_pred CCcEEEEcCC--CCchHHHHHHHHHH-HHcCCCeEEe
Q 018577 93 KFKTVHIAGT--KGKGSTAAFLSSIL-RAEGYSVGCY 126 (353)
Q Consensus 93 ~~~vI~VtGT--nGKtSTt~ml~~IL-~~~G~~vg~~ 126 (353)
+..+|-+||- .||||.+..|..-| ...|+.+..+
T Consensus 23 kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~l 59 (208)
T d1m7ga_ 23 RGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRL 59 (208)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEE
Confidence 5579999994 68999998887666 4567776553
No 95
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=24.72 E-value=63 Score=26.86 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=27.9
Q ss_pred cEEEEcC--CCCchHHHHHHHHHHHHcCCCeEEecC
Q 018577 95 KTVHIAG--TKGKGSTAAFLSSILRAEGYSVGCYTS 128 (353)
Q Consensus 95 ~vI~VtG--TnGKtSTt~ml~~IL~~~G~~vg~~tS 128 (353)
+++-|.| ..|||+.|..+..-.+..|.+|..+-+
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDt 93 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDA 93 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred eEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEEC
Confidence 5777777 689999999999999999988876544
No 96
>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.29 E-value=81 Score=22.06 Aligned_cols=20 Identities=40% Similarity=0.487 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHcCCCeEEe
Q 018577 107 STAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 107 STt~ml~~IL~~~G~~vg~~ 126 (353)
+....+..+|+..||.|...
T Consensus 12 ~~~~~l~~~L~~~g~~v~~a 31 (120)
T d1zgza1 12 VTQARLQSYFTQEGYTVSVT 31 (120)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEE
Confidence 46678899999999988653
No 97
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.31 E-value=84 Score=22.16 Aligned_cols=20 Identities=45% Similarity=0.418 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHcCCCeEEe
Q 018577 107 STAAFLSSILRAEGYSVGCY 126 (353)
Q Consensus 107 STt~ml~~IL~~~G~~vg~~ 126 (353)
....++..+|+..||+|-..
T Consensus 13 ~~~~~l~~~L~~~g~~v~~a 32 (121)
T d1xhfa1 13 VTRNTLKSIFEAEGYDVFEA 32 (121)
T ss_dssp HHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEE
Confidence 45678889999999987553
No 98
>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}
Probab=22.09 E-value=1e+02 Score=24.33 Aligned_cols=45 Identities=20% Similarity=0.165 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCCCCCCcEEEEcCCCCchHHHHHHHHHHHHcCCCeEE
Q 018577 78 GRMNRLMDRLGNPHSKFKTVHIAGTKGKGSTAAFLSSILRAEGYSVGC 125 (353)
Q Consensus 78 ~r~~~~l~~lg~p~~~~~vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~ 125 (353)
.-|+..+++.|...-+-+.|.|-| =|.+...++..|.+.|.++..
T Consensus 11 ~~~~~~~~~~g~~~L~gk~v~IqG---~G~VG~~~A~~L~~~Gakvvv 55 (201)
T d1c1da1 11 EAMKATVAHRGLGSLDGLTVLVQG---LGAVGGSLASLAAEAGAQLLV 55 (201)
T ss_dssp HHHHHHHHHTTCCCSTTCEEEEEC---CSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEC---CCHHHHHHHHHHHHCCCEEEE
Confidence 457778888886555667788876 466899999999999999854
No 99
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=22.04 E-value=33 Score=26.66 Aligned_cols=27 Identities=22% Similarity=0.479 Sum_probs=18.4
Q ss_pred CCCCCCCcEEEEcCC--CCchHHHHHHHHH
Q 018577 88 GNPHSKFKTVHIAGT--KGKGSTAAFLSSI 115 (353)
Q Consensus 88 g~p~~~~~vI~VtGT--nGKtSTt~ml~~I 115 (353)
|.|.+-+++| |-|. .||||.+.+|+.-
T Consensus 1 ~~~~r~mrIi-liG~PGSGKtT~a~~La~~ 29 (189)
T d2ak3a1 1 GASARLLRAA-IMGAPGSGKGTVSSRITKH 29 (189)
T ss_dssp CCSSCCCEEE-EECCTTSSHHHHHHHHHHH
T ss_pred CCCCcceeEE-EECCCCCCHHHHHHHHHHH
Confidence 3455555555 4465 7999999999873
No 100
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}
Probab=21.54 E-value=89 Score=21.13 Aligned_cols=30 Identities=17% Similarity=0.183 Sum_probs=22.9
Q ss_pred HHHHHHHHHhhcCCccChhHHHHHHHHHHH
Q 018577 159 IKGVLDEAIRLENGCITHFEVLTAMAFALF 188 (353)
Q Consensus 159 i~~~~~~~~~~~~~~~t~FE~~t~~a~~~f 188 (353)
+....+.++..+++.++|-||+.+++-+..
T Consensus 53 v~~~~~~lD~n~Dg~idF~EF~~li~~l~~ 82 (87)
T d1e8aa_ 53 IDEIFQGLDANQDEQVDFQEFISLVAIALK 82 (87)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCCHHHHHHHHHHHHH
Confidence 445556677788899999999998886544
No 101
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.22 E-value=54 Score=27.39 Aligned_cols=40 Identities=23% Similarity=0.333 Sum_probs=29.4
Q ss_pred CCCCCCCcEEEEcC--CCCchHHHHHHHHHHHHcCCCeEEecCC
Q 018577 88 GNPHSKFKTVHIAG--TKGKGSTAAFLSSILRAEGYSVGCYTSP 129 (353)
Q Consensus 88 g~p~~~~~vI~VtG--TnGKtSTt~ml~~IL~~~G~~vg~~tSp 129 (353)
|.|.. .++-|.| ..|||+.|..+..-.+..|..+..+-+.
T Consensus 56 G~~~g--~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE 97 (269)
T d1mo6a1 56 GLPRG--RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAE 97 (269)
T ss_dssp SBCSS--SEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred Ccccc--eeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECC
Confidence 44443 5677777 5899999988888888889887664443
No 102
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}
Probab=21.08 E-value=1.7e+02 Score=25.15 Aligned_cols=82 Identities=12% Similarity=0.166 Sum_probs=51.2
Q ss_pred HHHHHHHcCCCC--CCCcEEE-EcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHH
Q 018577 80 MNRLMDRLGNPH--SKFKTVH-IAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLF 156 (353)
Q Consensus 80 ~~~~l~~lg~p~--~~~~vI~-VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~ 156 (353)
+++.+...|.+. ...++|. +.|+.-+ +..+..-|.+.|+-+..+..|-+-....|+++- +....+++++..++
T Consensus 312 ~~~~l~~~g~~~~~~~~pIv~v~~~~~~~---a~~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~-~~a~hT~edId~~v 387 (401)
T d1fc4a_ 312 FREQMSAAGFTLAGADHAIIPVMLGDAVV---AQKFARELQKEGIYVTGFFYPVVPKGQARIRTQ-MSAAHTPEQITRAV 387 (401)
T ss_dssp HHHHHHHTTCCBCCSSSSEEEEEEECHHH---HHHHHHHHHHTTEECCEECTTSSCTTCEEEEEE-CCTTCCHHHHHHHH
T ss_pred HHhhhcccCCccCCCCCCEEEEEECCHHH---HHHHHHHHHHCCceEEeECCCCCCCCCceEEEE-ECCCCCHHHHHHHH
Confidence 444555566543 2346664 4454433 445667777889877667777665556666654 24667899988888
Q ss_pred HHHHHHHHH
Q 018577 157 HKIKGVLDE 165 (353)
Q Consensus 157 ~~i~~~~~~ 165 (353)
+.+.+..++
T Consensus 388 ~al~ev~~~ 396 (401)
T d1fc4a_ 388 EAFTRIGKQ 396 (401)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877766554
No 103
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.03 E-value=1.8e+02 Score=22.24 Aligned_cols=51 Identities=22% Similarity=0.197 Sum_probs=36.9
Q ss_pred CcEEEEcCCCCchHHHHHHHHHHHHcCCCeEEecCCcccccceeeeeCCCCcccCHHHHHHHHHHHHHHHHHH
Q 018577 94 FKTVHIAGTKGKGSTAAFLSSILRAEGYSVGCYTSPHIKTIRERMNVGRLNRPVSAKALNCLFHKIKGVLDEA 166 (353)
Q Consensus 94 ~~vI~VtGTnGKtSTt~ml~~IL~~~G~~vg~~tSp~l~~~~eri~in~~G~~is~~~~~~~~~~i~~~~~~~ 166 (353)
++.|+|-|+ |+.-.-|+..+..+|++|-+| + .+++.+.+....+...++.+
T Consensus 4 IkkvaViGa---G~mG~~iA~~~a~~G~~V~l~--------------D-----~~~~~l~~a~~~i~~~l~~~ 54 (192)
T d1f0ya2 4 VKHVTVIGG---GLMGAGIAQVAAATGHTVVLV--------------D-----QTEDILAKSKKGIEESLRKV 54 (192)
T ss_dssp CCEEEEECC---SHHHHHHHHHHHHTTCEEEEE--------------C-----SCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECc---CHHHHHHHHHHHhCCCcEEEE--------------E-----CChHHHHHHHhhHHHHHHHH
Confidence 567899888 888888999999999999774 2 34555555656555555443
Done!