Query         018578
Match_columns 353
No_of_seqs    454 out of 2811
Neff          8.4 
Searched_HMMs 13730
Date          Mon Mar 25 17:28:12 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018578.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018578hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1bi7b_ d.211.1.1 (B:) Cell cy  99.9 9.1E-28 6.6E-32  193.1  11.5  121  229-350     3-124 (125)
  2 d1myoa_ d.211.1.1 (A:) Myotrop  99.9 8.2E-28   6E-32  191.4   5.1  115  230-348     3-117 (118)
  3 d1oy3d_ d.211.1.1 (D:) Transcr  99.9 3.4E-25 2.4E-29  197.5  20.4   93  259-351   155-248 (255)
  4 d1ycsb1 d.211.1.1 (B:327-456)   99.9 2.3E-26 1.7E-30  186.0  11.5  119  231-349     3-124 (130)
  5 d1uoha_ d.211.1.1 (A:) 26S pro  99.9 6.7E-25 4.9E-29  193.0  19.6  136  213-350    88-223 (223)
  6 d1ot8a_ d.211.1.1 (A:) Neuroge  99.9 1.4E-25   1E-29  194.0  14.9  136  212-347     6-208 (209)
  7 d1bd8a_ d.211.1.1 (A:) Cell cy  99.9 3.1E-25 2.2E-29  184.3  16.1  126  223-350    30-155 (156)
  8 d1uoha_ d.211.1.1 (A:) 26S pro  99.9 5.8E-24 4.3E-28  186.9  20.6  125  228-352    69-193 (223)
  9 d1dcqa1 d.211.1.1 (A:369-522)   99.9 4.2E-24 3.1E-28  177.7  16.6  119  232-350     9-136 (154)
 10 d1ihba_ d.211.1.1 (A:) p18ink4  99.9 5.8E-24 4.2E-28  175.7  16.3  151  183-351     5-156 (156)
 11 d2fo1e1 d.211.1.1 (E:1021-1297  99.9 4.1E-23   3E-27  185.5  18.6  161  181-350    35-276 (277)
 12 d1awcb_ d.211.1.1 (B:) GA bind  99.9 4.3E-23 3.2E-27  169.8  17.0  124  225-348    30-153 (153)
 13 d1oy3d_ d.211.1.1 (D:) Transcr  99.9 1.1E-23 8.2E-28  187.5  13.5  133  219-351    35-215 (255)
 14 d1n11a_ d.211.1.1 (A:) Ankyrin  99.9 2.1E-22 1.5E-26  190.6  18.9  126  223-348   258-383 (408)
 15 d1ixva_ d.211.1.1 (A:) 26S pro  99.9 1.7E-21 1.2E-25  170.5  19.1  128  222-349    27-193 (229)
 16 d1iknd_ d.211.1.1 (D:) I-kappa  99.9 9.9E-23 7.2E-27  178.3  11.1  129  223-351    33-201 (221)
 17 d1ihba_ d.211.1.1 (A:) p18ink4  99.9 5.7E-22 4.2E-26  163.5  13.8  120  231-351     3-122 (156)
 18 d1k1aa_ d.211.1.1 (A:) bcl-3 {  99.9 5.5E-22   4E-26  170.3  13.5  123  223-345    34-227 (228)
 19 d1k1aa_ d.211.1.1 (A:) bcl-3 {  99.9 2.6E-21 1.9E-25  166.0  17.4  126  227-352     1-201 (228)
 20 d1bd8a_ d.211.1.1 (A:) Cell cy  99.9 1.4E-21 9.9E-26  161.9  14.4  121  230-351     3-124 (156)
 21 d1n11a_ d.211.1.1 (A:) Ankyrin  99.9 1.9E-21 1.4E-25  183.9  16.4  140  212-352    17-189 (408)
 22 d1s70b_ d.211.1.1 (B:) Myosin   99.9 7.7E-21 5.6E-25  172.2  19.5  135  217-352    62-256 (291)
 23 d1wdya_ d.211.1.1 (A:) RNase L  99.9 4.2E-21   3E-25  172.9  17.0  129  223-351   142-276 (285)
 24 d2fo1e1 d.211.1.1 (E:1021-1297  99.9 4.9E-22 3.6E-26  178.3  10.6  126  227-352    31-245 (277)
 25 d1sw6a_ d.211.1.1 (A:) Swi6 an  99.9 5.5E-22   4E-26  182.2  11.1   51  224-274   102-152 (301)
 26 d2ajaa1 a.118.24.1 (A:3-348) H  99.9 1.9E-23 1.4E-27  196.1   0.5  129  223-351    84-220 (346)
 27 d1ixva_ d.211.1.1 (A:) 26S pro  99.8 2.6E-21 1.9E-25  169.2  13.4  127  223-352    99-227 (229)
 28 d1dcqa1 d.211.1.1 (A:369-522)   99.8 5.4E-21 3.9E-25  158.7  14.0   96  225-320    41-139 (154)
 29 d1iknd_ d.211.1.1 (D:) I-kappa  99.8 1.1E-21 8.2E-26  171.5   9.4  124  228-351     1-168 (221)
 30 d1awcb_ d.211.1.1 (B:) GA bind  99.8 1.4E-20   1E-24  154.5  14.9  122  230-352     3-124 (153)
 31 d1myoa_ d.211.1.1 (A:) Myotrop  99.8 2.7E-21 1.9E-25  153.2   8.6   90  263-352     3-92  (118)
 32 d1ycsb1 d.211.1.1 (B:327-456)   99.8 5.8E-21 4.2E-25  153.8  10.2   88  264-351     3-90  (130)
 33 d1bi7b_ d.211.1.1 (B:) Cell cy  99.8 8.3E-20   6E-24  145.9  10.0   93  223-316    30-123 (125)
 34 d2ajaa1 a.118.24.1 (A:3-348) H  99.8   3E-21 2.2E-25  180.9   1.4   97  223-319   120-221 (346)
 35 d1s70b_ d.211.1.1 (B:) Myosin   99.8 1.7E-19 1.2E-23  163.2  12.1  124  226-349    37-160 (291)
 36 d1ot8a_ d.211.1.1 (A:) Neuroge  99.8 2.1E-19 1.5E-23  154.6   9.2  111  242-352     2-180 (209)
 37 d1wdya_ d.211.1.1 (A:) RNase L  99.8 1.1E-17 8.1E-22  150.1  18.5  136  215-350    25-241 (285)
 38 d1sw6a_ d.211.1.1 (A:) Swi6 an  99.7 8.1E-18 5.9E-22  154.0  11.9  102  250-351    94-282 (301)
 39 d1hbka_ a.11.1.1 (A:) Acyl-CoA  78.3     1.4  0.0001   30.5   4.6   75   83-170     6-87  (89)
 40 d1hb6a_ a.11.1.1 (A:) Acyl-CoA  65.2     2.2 0.00016   29.2   3.0   67   83-164     5-77  (86)
 41 d2f4mb1 a.189.1.1 (B:275-332)   24.7      40  0.0029   20.7   3.6   18   64-81      5-22  (58)

No 1  
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=9.1e-28  Score=193.06  Aligned_cols=121  Identities=26%  Similarity=0.390  Sum_probs=115.3

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHcCC
Q 018578          229 DESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKN-TALHYAAGYGR  307 (353)
Q Consensus       229 g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~-TpLh~A~~~g~  307 (353)
                      +.++||+|+..|++++|++|+++|++++.++..|.||||+| ..|+.+++++|+++|++++.++..|. ||||+|+.+|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a-~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSS-CTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCcccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence            56899999999999999999999999999999999999976 47999999999999999999999876 69999999999


Q ss_pred             HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhc
Q 018578          308 KECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD  350 (353)
Q Consensus       308 ~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  350 (353)
                      .+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+..
T Consensus        82 ~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Llsa  124 (125)
T d1bi7b_          82 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA  124 (125)
T ss_dssp             HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC
T ss_pred             ccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999864


No 2  
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.94  E-value=8.2e-28  Score=191.41  Aligned_cols=115  Identities=31%  Similarity=0.460  Sum_probs=108.5

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 018578          230 ESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKE  309 (353)
Q Consensus       230 ~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~~  309 (353)
                      .|||++|+..|+.++|++|++.|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Q 018578          310 CVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE  348 (353)
Q Consensus       310 ~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll  348 (353)
                      +|++|+++|++++.+|.+|+||||+|..    +.++.|+
T Consensus        83 ~v~~Ll~~Gad~~~~d~~G~t~l~~a~~----~~i~~LL  117 (118)
T d1myoa_          83 CVKLLLSKGADKTVKGPDGLTALEATDN----QAIKALL  117 (118)
T ss_dssp             HHHHHHTTCCCSSSSSSSTCCCCCTCSS----TTTGGGG
T ss_pred             hhhhhhcccccceeeCCCCCCHHHHHhH----HHHHHhc
Confidence            9999999999999999999999999843    3455554


No 3  
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.93  E-value=3.4e-25  Score=197.53  Aligned_cols=93  Identities=28%  Similarity=0.389  Sum_probs=85.5

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Q 018578          259 DSEGRTALHFACGYGEVKCAQILLEAGANVDAL-DKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKL  337 (353)
Q Consensus       259 d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~-d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~  337 (353)
                      +..|+||||+||..++.++|++|++.+++.+.. +..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus       155 d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~  234 (255)
T d1oy3d_         155 NYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL  234 (255)
T ss_dssp             CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred             cccCcccccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            345788999999999999999999999888754 5679999999999999999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHhcC
Q 018578          338 NSQHDVLKLLEKDA  351 (353)
Q Consensus       338 ~g~~~iv~~Ll~~~  351 (353)
                      +++.+++++|+++|
T Consensus       235 ~~~~~i~~~Ll~~G  248 (255)
T d1oy3d_         235 RPNPILARLLRAHG  248 (255)
T ss_dssp             SSCHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHcC
Confidence            99999999999987


No 4  
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=2.3e-26  Score=186.04  Aligned_cols=119  Identities=26%  Similarity=0.310  Sum_probs=112.7

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 018578          231 SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKEC  310 (353)
Q Consensus       231 t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~~~  310 (353)
                      ++|+.||..|+.++|++|+++|+|++.+|..|+||||+||..|+.+++++|++.|++++.+|.+|+||||+|+.+|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCCCCCcCC-CCCCHHHHH--HHcCcHHHHHHHHh
Q 018578          311 VALLLENGAAVTLQNM-DGKTPIDVA--KLNSQHDVLKLLEK  349 (353)
Q Consensus       311 v~~Ll~~gad~~~~d~-~g~TpL~~A--~~~g~~~iv~~Ll~  349 (353)
                      |++|+++|++++..+. .|+||++++  ..+|+.+++++|+.
T Consensus        83 v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~  124 (130)
T d1ycsb1          83 CKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG  124 (130)
T ss_dssp             HHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred             HHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHh
Confidence            9999999999998775 589998876  56789999999985


No 5  
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=6.7e-25  Score=192.97  Aligned_cols=136  Identities=32%  Similarity=0.361  Sum_probs=125.9

Q ss_pred             hhhhcCcchhhhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCC
Q 018578          213 SADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD  292 (353)
Q Consensus       213 ~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d  292 (353)
                      .+...+.+. ...+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+..|.+++.+|
T Consensus        88 ~Ll~~~~d~-~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d  166 (223)
T d1uoha_          88 ALLGKGAQV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQD  166 (223)
T ss_dssp             HHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred             HHhccCcee-EeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhccccceeeecc
Confidence            334444443 5568889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhc
Q 018578          293 KNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD  350 (353)
Q Consensus       293 ~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  350 (353)
                      ..|+||||+|+..|+.++|++|+++|++++.+|.+|+||||+|. .|+.+++++|++.
T Consensus       167 ~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A~-~~~~~i~~~Ll~~  223 (223)
T d1uoha_         167 TEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMVEG  223 (223)
T ss_dssp             TTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHCC-TTHHHHHHHHHCC
T ss_pred             CCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH-CCCHHHHhcccCC
Confidence            99999999999999999999999999999999999999999985 6999999999874


No 6  
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.93  E-value=1.4e-25  Score=194.05  Aligned_cols=136  Identities=33%  Similarity=0.438  Sum_probs=123.9

Q ss_pred             hhhhhcCcchhhhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-------------------------------
Q 018578          212 TSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS-------------------------------  260 (353)
Q Consensus       212 ~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~-------------------------------  260 (353)
                      ..+...|.++....+.+|.||||+||..|+.+++++|+..|++++.++.                               
T Consensus         6 ~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (209)
T d1ot8a_           6 SDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNA   85 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTC
T ss_pred             HHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccc
Confidence            3445566666556688899999999999999999999998887765543                               


Q ss_pred             ------------------------------------CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 018578          261 ------------------------------------EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG  304 (353)
Q Consensus       261 ------------------------------------~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~  304 (353)
                                                          .|+||||+++..+...+++.|+..+.+++..|..|.||||+|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~  165 (209)
T d1ot8a_          86 RMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAR  165 (209)
T ss_dssp             CCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             ccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhcc
Confidence                                                57899999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Q 018578          305 YGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL  347 (353)
Q Consensus       305 ~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~L  347 (353)
                      .|+.++|++|+++|++++.+|..|+||||+|+.+|+.+||++|
T Consensus       166 ~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         166 EGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             ccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            9999999999999999999999999999999999999999987


No 7  
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=3.1e-25  Score=184.32  Aligned_cols=126  Identities=21%  Similarity=0.352  Sum_probs=120.2

Q ss_pred             hhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 018578          223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA  302 (353)
Q Consensus       223 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A  302 (353)
                      ...+..|+||||+|+ .|+.+++++|++.+.+++..+..|.+||++++..++.+++++++++|++++.+|..|+||||+|
T Consensus        30 n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A  108 (156)
T d1bd8a_          30 DALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLA  108 (156)
T ss_dssp             TCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred             CccCCCCCccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCeeeccc
Confidence            556788999999986 5899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhc
Q 018578          303 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD  350 (353)
Q Consensus       303 ~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  350 (353)
                      |..|+.+++++|+ .|++++.+|.+|+||||+|+.+|+.+++++|++|
T Consensus       109 ~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         109 VQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            9999999999887 7899999999999999999999999999999987


No 8  
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92  E-value=5.8e-24  Score=186.87  Aligned_cols=125  Identities=34%  Similarity=0.423  Sum_probs=112.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 018578          228 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR  307 (353)
Q Consensus       228 ~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~  307 (353)
                      .+.+++++++..|+.+++++|++.|++++..|..|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+..++
T Consensus        69 ~~~~~~~~~~~~~~~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~  148 (223)
T d1uoha_          69 AGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGN  148 (223)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             cccccccccccccccchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCC
Confidence            34455555555556667777777888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCC
Q 018578          308 KECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF  352 (353)
Q Consensus       308 ~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~  352 (353)
                      .+++++|++.|++++.+|.+|+||||+|+.+|+.++|++|+++|.
T Consensus       149 ~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Ga  193 (223)
T d1uoha_         149 LKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGA  193 (223)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             cchhhhhccccceeeeccCCCCceeccccccCcHHHHHHHHHCCC
Confidence            999999999999999999999999999999999999999998763


No 9  
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.91  E-value=4.2e-24  Score=177.74  Aligned_cols=119  Identities=30%  Similarity=0.442  Sum_probs=110.6

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCC------CCCCCcHHHHHHhc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 018578          232 IVHHTASVGDAEGLKNALAAGADKDEE------DSEGRTALHFACGY---GEVKCAQILLEAGANVDALDKNKNTALHYA  302 (353)
Q Consensus       232 ~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~------d~~g~t~Lh~Aa~~---g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A  302 (353)
                      .|+.|+..+++..+..++..|+|++..      +..|+||||+|+..   ++.++|++|+++|++++.+|..|+||||+|
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A   88 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC   88 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccccc
Confidence            466788899999999999999887654      67899999999974   688999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhc
Q 018578          303 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD  350 (353)
Q Consensus       303 ~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  350 (353)
                      |..|+.+++++|+++|++++.+|.+|+||||+|+.+|+.+++++|++.
T Consensus        89 ~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~  136 (154)
T d1dcqa1          89 CLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA  136 (154)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             cccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999984


No 10 
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91  E-value=5.8e-24  Score=175.72  Aligned_cols=151  Identities=26%  Similarity=0.331  Sum_probs=134.4

Q ss_pred             HHHHHHhcCcchHHHHHHHhccccCCchhhhhhhcCcchhhhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 018578          183 SAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEG  262 (353)
Q Consensus       183 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g  262 (353)
                      .+.+...++.++++.|                ...|.++ ...+..|.||||+|+ .|+.+++++|++.|++++.++..|
T Consensus         5 Lh~Aa~~g~~~~v~~L----------------l~~g~d~-n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~   66 (156)
T d1ihba_           5 LASAAARGDLEQLTSL----------------LQNNVNV-NAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTG   66 (156)
T ss_dssp             HHHHHHHTCHHHHHHH----------------TTSCCCT-TCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTS
T ss_pred             HHHHHHcCCHHHHHHH----------------HHCCCCc-CccCCcccccccccc-cccccccccccccccccccccccC
Confidence            3445555566666555                3445554 556888999999885 799999999999999999999999


Q ss_pred             CcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcCcH
Q 018578          263 RTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGA-AVTLQNMDGKTPIDVAKLNSQH  341 (353)
Q Consensus       263 ~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga-d~~~~d~~g~TpL~~A~~~g~~  341 (353)
                      .++|++++..+..++++.|+..+.+++..|..|.+|||+|+..++.+++++|+++|+ +++.+|.+|.||||+|+.+++.
T Consensus        67 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~  146 (156)
T d1ihba_          67 FAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN  146 (156)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCH
Confidence            999999999999999999999999999999999999999999999999999999876 8999999999999999999999


Q ss_pred             HHHHHHHhcC
Q 018578          342 DVLKLLEKDA  351 (353)
Q Consensus       342 ~iv~~Ll~~~  351 (353)
                      +++++|+++|
T Consensus       147 ~iv~~Ll~~G  156 (156)
T d1ihba_         147 EVVSLMQANG  156 (156)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHhcC
Confidence            9999999987


No 11 
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.90  E-value=4.1e-23  Score=185.50  Aligned_cols=161  Identities=22%  Similarity=0.265  Sum_probs=124.8

Q ss_pred             CHHHHHHHhcCcchHHHHHHHhccccCCchhhhhhhcCcchhhhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 018578          181 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS  260 (353)
Q Consensus       181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~  260 (353)
                      .+.+++...++.++++.|.....        ..+...|.++ +..+..|.||||+|+..|+.++|++|+++|++++.+|.
T Consensus        35 T~Lh~A~~~g~~~~v~~Ll~~~~--------~~~l~~Gadv-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~  105 (277)
T d2fo1e1          35 TVLHWIASNSSAEKSEDLIVHEA--------KECIAAGADV-NAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNK  105 (277)
T ss_dssp             CHHHHHHCTTCCSCCTTHHHHHH--------HHHHHTCCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred             cHHHHHHHcCCHHHHHHHHhcch--------hHHHHcCCCc-cccCCCCCeeeccccccccccccccccccccccccccc
Confidence            44555555555555555432111        1122344444 45688999999999999999999999999999998887


Q ss_pred             CCCcHHHHHHhc--------------------------------------------------------------------
Q 018578          261 EGRTALHFACGY--------------------------------------------------------------------  272 (353)
Q Consensus       261 ~g~t~Lh~Aa~~--------------------------------------------------------------------  272 (353)
                      .|.||||+|+..                                                                    
T Consensus       106 ~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (277)
T d2fo1e1         106 SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKY  185 (277)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSC
T ss_pred             cccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhccccccccccccccccccccccccccccccccc
Confidence            666666555544                                                                    


Q ss_pred             ------------CCHHHHHHH-HHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Q 018578          273 ------------GEVKCAQIL-LEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS  339 (353)
Q Consensus       273 ------------g~~~~v~~L-l~~gadi~~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g  339 (353)
                                  ++.++++++ ...+.+++.+|..|+||||+||..|+.++|++|+++|++++.+|.+|+||||+|+.+|
T Consensus       186 ~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~  265 (277)
T d2fo1e1         186 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANN  265 (277)
T ss_dssp             CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred             CCCCccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcC
Confidence                        444445543 3556778888999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHhc
Q 018578          340 QHDVLKLLEKD  350 (353)
Q Consensus       340 ~~~iv~~Ll~~  350 (353)
                      +.++|++|+++
T Consensus       266 ~~~iv~lL~~c  276 (277)
T d2fo1e1         266 HHNIVDIFDRC  276 (277)
T ss_dssp             CHHHHHHHHTT
T ss_pred             CHHHHHHHHHh
Confidence            99999999974


No 12 
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.90  E-value=4.3e-23  Score=169.79  Aligned_cols=124  Identities=33%  Similarity=0.416  Sum_probs=117.5

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 018578          225 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG  304 (353)
Q Consensus       225 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~  304 (353)
                      .+..|+||||+|+..++.+++..++.........+..+.+++|+++...+.+++++|+.+|++++.+|..|+||||+||.
T Consensus        30 ~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~  109 (153)
T d1awcb_          30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE  109 (153)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cccCCCccccccccccccccccccccccccccccccccccccccccccccceeeecccccCCccccccccCchHHHhhhh
Confidence            47789999999999999999999999888877778888999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Q 018578          305 YGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE  348 (353)
Q Consensus       305 ~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll  348 (353)
                      .|+.+||++|+++|++++.+|.+|.||||+|+.+|+.+++++|.
T Consensus       110 ~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL~  153 (153)
T d1awcb_         110 HNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQ  153 (153)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred             cchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhCc
Confidence            99999999999999999999999999999999999999999873


No 13 
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.90  E-value=1.1e-23  Score=187.51  Aligned_cols=133  Identities=29%  Similarity=0.395  Sum_probs=116.2

Q ss_pred             cchhhhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCC------------
Q 018578          219 ADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGA------------  286 (353)
Q Consensus       219 ~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~ga------------  286 (353)
                      .......+..|.||||+||..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|++.+.            
T Consensus        35 ~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~  114 (255)
T d1oy3d_          35 HEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLT  114 (255)
T ss_dssp             SGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------
T ss_pred             cccccCcCCCCCCccchHHhhcccccccccccccccccccccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhh
Confidence            34456677889999999999999999999999999999999999999999999999999999876532            


Q ss_pred             -----------------------------------CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCC
Q 018578          287 -----------------------------------NVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTL-QNMDGKT  330 (353)
Q Consensus       287 -----------------------------------di~~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~g~T  330 (353)
                                                         +++.+|..|+||||+||.+++.+++++|++++++.+. .+..|+|
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~T  194 (255)
T d1oy3d_         115 QSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRT  194 (255)
T ss_dssp             -----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC
T ss_pred             HHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccccccccccccc
Confidence                                               1345677899999999999999999999999999885 4678999


Q ss_pred             HHHHHHHcCcHHHHHHHHhcC
Q 018578          331 PIDVAKLNSQHDVLKLLEKDA  351 (353)
Q Consensus       331 pL~~A~~~g~~~iv~~Ll~~~  351 (353)
                      |||+|+..|+.+++++|+++|
T Consensus       195 pL~~A~~~~~~~~v~~Ll~~g  215 (255)
T d1oy3d_         195 PLHLAVEAQAASVLELLLKAG  215 (255)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTT
T ss_pred             cccccccccHHHHHHHHHHCC
Confidence            999999999999999999986


No 14 
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89  E-value=2.1e-22  Score=190.60  Aligned_cols=126  Identities=31%  Similarity=0.377  Sum_probs=121.1

Q ss_pred             hhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 018578          223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA  302 (353)
Q Consensus       223 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A  302 (353)
                      ...+..|.|+|+.|+..++.+++++|++.|++++..+..+.||||+++..++.++++++++.|++++.+|.+|+||||+|
T Consensus       258 ~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A  337 (408)
T d1n11a_         258 NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQA  337 (408)
T ss_dssp             TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             ccccCCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHH
Confidence            34467889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Q 018578          303 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE  348 (353)
Q Consensus       303 ~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll  348 (353)
                      +.+|+.++|++|+++||+++.+|.+|+||||+|+.+|+.++|++|.
T Consensus       338 ~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~  383 (408)
T d1n11a_         338 AQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK  383 (408)
T ss_dssp             HHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred             HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999774


No 15 
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.87  E-value=1.7e-21  Score=170.45  Aligned_cols=128  Identities=29%  Similarity=0.312  Sum_probs=79.2

Q ss_pred             hhhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC---CCCC-----------------------------------C
Q 018578          222 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEE---DSEG-----------------------------------R  263 (353)
Q Consensus       222 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~---d~~g-----------------------------------~  263 (353)
                      ....+.+|+||||+|+..|+.+++++|++.|++++..   +..|                                   .
T Consensus        27 ~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (229)
T d1ixva_          27 LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGV  106 (229)
T ss_dssp             TTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSC
T ss_pred             ccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3556788899999999999999999999888876532   2222                                   2


Q ss_pred             cHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHH
Q 018578          264 TALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENG-AAVTLQNMDGKTPIDVAKLNSQHD  342 (353)
Q Consensus       264 t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~TpL~~A~~~g~~~  342 (353)
                      |++++++..++.+++++|+..|.+.+.+|..|+||||+|+.+|+.+++++|++.| .+++.+|.+|+||||+|+.+|+.+
T Consensus       107 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~  186 (229)
T d1ixva_         107 TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD  186 (229)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred             cccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhcccccHH
Confidence            3333333444444555555555555555555666666666666666666666554 455556666666666666666666


Q ss_pred             HHHHHHh
Q 018578          343 VLKLLEK  349 (353)
Q Consensus       343 iv~~Ll~  349 (353)
                      +|++|++
T Consensus       187 ~v~~Ll~  193 (229)
T d1ixva_         187 AAVLLVE  193 (229)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6666553


No 16 
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87  E-value=9.9e-23  Score=178.30  Aligned_cols=129  Identities=28%  Similarity=0.375  Sum_probs=101.8

Q ss_pred             hhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHH--------------------------
Q 018578          223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVK--------------------------  276 (353)
Q Consensus       223 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~--------------------------  276 (353)
                      +..+..|+||||+||..|+.+++++|++.|++++.+|..|.||||+++..++.+                          
T Consensus        33 n~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  112 (221)
T d1iknd_          33 NFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGH  112 (221)
T ss_dssp             CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCC
T ss_pred             ccCCCCCCccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccc
Confidence            345667888888888888888888888888887777776666665555555544                          


Q ss_pred             -------------HHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Q 018578          277 -------------CAQILLEAGANVDALD-KNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHD  342 (353)
Q Consensus       277 -------------~v~~Ll~~gadi~~~d-~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~  342 (353)
                                   ++++|+..|+.++..+ .+|+||||+|+.+|+.+++++|+++|+|++.+|.+|+||||+|+.+++.+
T Consensus       113 t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~  192 (221)
T d1iknd_         113 TCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTR  192 (221)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHH
T ss_pred             hhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHHHHHCCCHH
Confidence                         4555555555665554 56999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcC
Q 018578          343 VLKLLEKDA  351 (353)
Q Consensus       343 iv~~Ll~~~  351 (353)
                      ++++|++..
T Consensus       193 ~~~~l~~~~  201 (221)
T d1iknd_         193 IQQQLGQLT  201 (221)
T ss_dssp             HHHHHHTTS
T ss_pred             HHHHHHHcC
Confidence            999998753


No 17 
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87  E-value=5.7e-22  Score=163.50  Aligned_cols=120  Identities=29%  Similarity=0.382  Sum_probs=116.4

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHH
Q 018578          231 SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKEC  310 (353)
Q Consensus       231 t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~~~  310 (353)
                      ++||+||..|+.++|++|+++|+|++.+|..|+||||+|+ .|+.+++++|+++|++++.++..|.++|++++..++.++
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~   81 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-cccccccccccccccccccccccCccccccccccccccc
Confidence            7999999999999999999999999999999999999876 799999999999999999999999999999999999999


Q ss_pred             HHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 018578          311 VALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA  351 (353)
Q Consensus       311 v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  351 (353)
                      +.+|+..+.+++..|..|.+|||+|+..++.+++++|++++
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~  122 (156)
T d1ihba_          82 LQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT  122 (156)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999998865


No 18 
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87  E-value=5.5e-22  Score=170.33  Aligned_cols=123  Identities=29%  Similarity=0.358  Sum_probs=109.8

Q ss_pred             hhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC------------------------------------------
Q 018578          223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS------------------------------------------  260 (353)
Q Consensus       223 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~------------------------------------------  260 (353)
                      +..+..|+||||+|+..|+.+++++|++.|++.+..+.                                          
T Consensus        34 n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (228)
T d1k1aa_          34 DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTA  113 (228)
T ss_dssp             CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCH
T ss_pred             CccCCCCCccceehhcccccccccccccccccccccccccccccccccccccccchhhhhhccccccccccccccccccc
Confidence            45578899999999999999999999998887655432                                          


Q ss_pred             -----------------------------CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 018578          261 -----------------------------EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECV  311 (353)
Q Consensus       261 -----------------------------~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~~~v  311 (353)
                                                   .+.++||+|+..+...+++++++.|.+++.+|..|.||||+|+.+|+.+++
T Consensus       114 l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v  193 (228)
T d1k1aa_         114 LHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLV  193 (228)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHH
T ss_pred             cccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHHcCCHHHH
Confidence                                         367888889999999999999999999999999999999999999999999


Q ss_pred             HHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Q 018578          312 ALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLK  345 (353)
Q Consensus       312 ~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~  345 (353)
                      ++|+++|+|++.+|.+|+||||+|+.+|+.++|+
T Consensus       194 ~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         194 RTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             HHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             HHHHHCCCCCCCCCCCCCCHHHHHHhCCCccccC
Confidence            9999999999999999999999999999988875


No 19 
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86  E-value=2.6e-21  Score=166.00  Aligned_cols=126  Identities=22%  Similarity=0.263  Sum_probs=115.1

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHH----cCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCC-----------
Q 018578          227 NEDESIVHHTASVGDAEGLKNALA----AGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDAL-----------  291 (353)
Q Consensus       227 ~~g~t~Lh~Aa~~g~~~~v~~Ll~----~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~-----------  291 (353)
                      ++|.||||+||..|+.+++++|++    .|++++.+|..|+||||+||..|+.+++++|+++|++++..           
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a   80 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA   80 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccccccccccccccccccccc
Confidence            369999999999999999998875    79999999999999999999999999999999999865443           


Q ss_pred             ------------------------------------------------------------CCCCCcHHHHHHHcCCHHHH
Q 018578          292 ------------------------------------------------------------DKNKNTALHYAAGYGRKECV  311 (353)
Q Consensus       292 ------------------------------------------------------------d~~G~TpLh~A~~~g~~~~v  311 (353)
                                                                                  +..|.++|++|+..+...++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~  160 (228)
T d1k1aa_          81 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV  160 (228)
T ss_dssp             HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred             cccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhh
Confidence                                                                        22577889999999999999


Q ss_pred             HHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCC
Q 018578          312 ALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF  352 (353)
Q Consensus       312 ~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~  352 (353)
                      ++++++|.+++.+|..|.||||+|+.+|+.+++++|+++|.
T Consensus       161 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Ga  201 (228)
T d1k1aa_         161 QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA  201 (228)
T ss_dssp             HHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             hhhhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCC
Confidence            99999999999999999999999999999999999999873


No 20 
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86  E-value=1.4e-21  Score=161.95  Aligned_cols=121  Identities=26%  Similarity=0.376  Sum_probs=114.4

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q 018578          230 ESIVHHTASVGDAEGLKNALAA-GADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRK  308 (353)
Q Consensus       230 ~t~Lh~Aa~~g~~~~v~~Ll~~-g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~  308 (353)
                      ...|+.||..|++++|+.|+.. +++++..|..|+||||+|+ .|+.+++++|++.+++++..+..|.+||++++..++.
T Consensus         3 g~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~   81 (156)
T d1bd8a_           3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL   81 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            3569999999999999999986 7899999999999999886 5899999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 018578          309 ECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA  351 (353)
Q Consensus       309 ~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  351 (353)
                      +++++++++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus        82 ~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~~~~  124 (156)
T d1bd8a_          82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES  124 (156)
T ss_dssp             HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTS
T ss_pred             cccccccccccccccccCCCCeeeccccccccccccccccccc
Confidence            9999999999999999999999999999999999999998764


No 21 
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86  E-value=1.9e-21  Score=183.88  Aligned_cols=140  Identities=30%  Similarity=0.368  Sum_probs=98.9

Q ss_pred             hhhhhcCcchhhhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCC----
Q 018578          212 TSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGAN----  287 (353)
Q Consensus       212 ~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gad----  287 (353)
                      ..+...|.++ +..+..|.||||+||..|+.++|++|+++|++++.++..|+||||+|+..|+.+++++|+..+.+    
T Consensus        17 ~~Ll~~g~~i-n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~   95 (408)
T d1n11a_          17 KNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLA   95 (408)
T ss_dssp             HHHHHTTCCS-CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCC
T ss_pred             HHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhhhccccc
Confidence            4444445443 34456666777777777777777777777777766666677777777777776666666654332    


Q ss_pred             -----------------------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Q 018578          288 -----------------------------VDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLN  338 (353)
Q Consensus       288 -----------------------------i~~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~  338 (353)
                                                   .+..+..+.++|++|+..++.+++++|+++|++++..+.+|.+|||+|+.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~L~~A~~~  175 (408)
T d1n11a_          96 TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHH  175 (408)
T ss_dssp             CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHT
T ss_pred             cccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCcCchHHHHHHHc
Confidence                                         233345566666777777777788888888889999999999999999999


Q ss_pred             CcHHHHHHHHhcCC
Q 018578          339 SQHDVLKLLEKDAF  352 (353)
Q Consensus       339 g~~~iv~~Ll~~~~  352 (353)
                      |+.+++++|+++|.
T Consensus       176 ~~~~~~~~Ll~~g~  189 (408)
T d1n11a_         176 NNLDIVKLLLPRGG  189 (408)
T ss_dssp             TCHHHHHHHGGGTC
T ss_pred             CCHHHHHHHHhcCC
Confidence            99999999988753


No 22 
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.86  E-value=7.7e-21  Score=172.17  Aligned_cols=135  Identities=28%  Similarity=0.411  Sum_probs=114.8

Q ss_pred             cCcchhhhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCC-----
Q 018578          217 AGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDAL-----  291 (353)
Q Consensus       217 ~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~-----  291 (353)
                      .|.++ +..+..|.||||+|+..|+.++|++|++.|++....+..+.+|||+++..++.+++++|+++|+..+..     
T Consensus        62 ~Gadv-n~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~  140 (291)
T d1s70b_          62 RGADI-NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGD  140 (291)
T ss_dssp             HCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             CCCCC-CccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccccccchhhcccccCcccccccccCc
Confidence            34443 456788999999999999999999999999998888888999999999999999999998887654332     


Q ss_pred             -------------------------------------------------------CCCCCcHHHHHHHcCCHHHHHHHHH
Q 018578          292 -------------------------------------------------------DKNKNTALHYAAGYGRKECVALLLE  316 (353)
Q Consensus       292 -------------------------------------------------------d~~G~TpLh~A~~~g~~~~v~~Ll~  316 (353)
                                                                             +..|.||||+|+..|+.+++++|++
T Consensus       141 ~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~  220 (291)
T d1s70b_         141 TPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ  220 (291)
T ss_dssp             CHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred             cccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhccccc
Confidence                                                                   3457788899999999999999999


Q ss_pred             CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCC
Q 018578          317 NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF  352 (353)
Q Consensus       317 ~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~  352 (353)
                      +|++++.++.+|+||||+|+..|+.++|++|+++|.
T Consensus       221 ~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Ga  256 (291)
T d1s70b_         221 ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC  256 (291)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             ceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence            999999999999999999999999999999998873


No 23 
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86  E-value=4.2e-21  Score=172.90  Aligned_cols=129  Identities=28%  Similarity=0.281  Sum_probs=118.2

Q ss_pred             hhcCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHhcC----CHHHHHHHHHcCCCCCCCCCCCCc
Q 018578          223 EEVGNEDESIVHHTASVGDAEGLKNALAA-GADKDEEDSEGRTALHFACGYG----EVKCAQILLEAGANVDALDKNKNT  297 (353)
Q Consensus       223 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~-g~d~~~~d~~g~t~Lh~Aa~~g----~~~~v~~Ll~~gadi~~~d~~G~T  297 (353)
                      ......|.||||+|+..|+.+++++|++. |++++..+..|.++++.+...+    ...++++|+++|++++.+|..|.|
T Consensus       142 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t  221 (285)
T d1wdya_         142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKT  221 (285)
T ss_dssp             HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred             hhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCC
Confidence            44567799999999999999999999975 8999999999999888765543    457999999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 018578          298 ALHYAAGYGRKECVALLLE-NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA  351 (353)
Q Consensus       298 pLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  351 (353)
                      |||+|+..|+.++|++|++ .|++++.+|.+|+||||+|+.+|+.++|++|+++|
T Consensus       222 ~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~G  276 (285)
T d1wdya_         222 PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG  276 (285)
T ss_dssp             HHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred             ccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence            9999999999999999998 49999999999999999999999999999999987


No 24 
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.86  E-value=4.9e-22  Score=178.34  Aligned_cols=126  Identities=30%  Similarity=0.365  Sum_probs=106.4

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHH--------HHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcH
Q 018578          227 NEDESIVHHTASVGDAEGLKNA--------LAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTA  298 (353)
Q Consensus       227 ~~g~t~Lh~Aa~~g~~~~v~~L--------l~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~Tp  298 (353)
                      ..|+||||+||..|+.++|+.|        ++.|+|+|.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||
T Consensus        31 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~  110 (277)
T d2fo1e1          31 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA  110 (277)
T ss_dssp             SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeecccccccccccccccccccccccccccccccc
Confidence            4699999999999999888776        56799999999999999999999999999999999999999888777777


Q ss_pred             HHHHHHcCCH----------------------------------------------------------------------
Q 018578          299 LHYAAGYGRK----------------------------------------------------------------------  308 (353)
Q Consensus       299 Lh~A~~~g~~----------------------------------------------------------------------  308 (353)
                      ||+|+..++.                                                                      
T Consensus       111 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~  190 (277)
T d2fo1e1         111 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA  190 (277)
T ss_dssp             HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCT
T ss_pred             ccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCc
Confidence            7776655544                                                                      


Q ss_pred             ----------HHHHHH-HHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCC
Q 018578          309 ----------ECVALL-LENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF  352 (353)
Q Consensus       309 ----------~~v~~L-l~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~  352 (353)
                                +++.++ ...+.+++.+|..|+||||+|+..|+.++|++|+++|.
T Consensus       191 L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~ga  245 (277)
T d2fo1e1         191 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA  245 (277)
T ss_dssp             HHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             cccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcC
Confidence                      344332 23455667789999999999999999999999999873


No 25 
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.86  E-value=5.5e-22  Score=182.22  Aligned_cols=51  Identities=20%  Similarity=0.234  Sum_probs=47.5

Q ss_pred             hcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCC
Q 018578          224 EVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE  274 (353)
Q Consensus       224 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~  274 (353)
                      ..|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+||..++
T Consensus       102 ~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~  152 (301)
T d1sw6a_         102 PVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN  152 (301)
T ss_dssp             CCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhccc
Confidence            347889999999999999999999999999999999999999999998664


No 26 
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.85  E-value=1.9e-23  Score=196.09  Aligned_cols=129  Identities=19%  Similarity=0.119  Sum_probs=112.0

Q ss_pred             hhcCCCCCcHHHHHHHcCCHHHHHH---HHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCC--CCCc
Q 018578          223 EEVGNEDESIVHHTASVGDAEGLKN---ALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDK--NKNT  297 (353)
Q Consensus       223 ~~~~~~g~t~Lh~Aa~~g~~~~v~~---Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~--~G~T  297 (353)
                      ...+..|.|+||+||..|+.+++++   |+..|++++.+|..|+||||+||..|+.++|++|++.|++++..+.  .|+|
T Consensus        84 ~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t  163 (346)
T d2ajaa1          84 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYH  163 (346)
T ss_dssp             HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHH
T ss_pred             HhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCC
Confidence            3457789999999999999877765   7899999999999999999999999999999999999999988763  5999


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 018578          298 ALHYAAGYGRKECVALLLENGAAV---TLQNMDGKTPIDVAKLNSQHDVLKLLEKDA  351 (353)
Q Consensus       298 pLh~A~~~g~~~~v~~Ll~~gad~---~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  351 (353)
                      |||+||.+|+.+||++|++.|++.   +..+.+|.||+++|+.+|+.++|++|+++|
T Consensus       164 ~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~g  220 (346)
T d2ajaa1         164 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP  220 (346)
T ss_dssp             HHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred             hhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCC
Confidence            999999999999999999999865   344566788889999999999999999864


No 27 
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.85  E-value=2.6e-21  Score=169.20  Aligned_cols=127  Identities=25%  Similarity=0.269  Sum_probs=118.5

Q ss_pred             hhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHH
Q 018578          223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAG-ANVDALDKNKNTALHY  301 (353)
Q Consensus       223 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~g-adi~~~d~~G~TpLh~  301 (353)
                      ...+..+.|+++.++..++.++++.|+..|.+.+.+|..|+||||+|+.+|+.+++++|++.| .+++.+|..|+||||+
T Consensus        99 ~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~  178 (229)
T d1ixva_          99 NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH  178 (229)
T ss_dssp             TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHH
T ss_pred             cccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhh
Confidence            344677899999999999999999999999999999999999999999999999999999987 6889999999999999


Q ss_pred             HHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCC
Q 018578          302 AAGYGRKECVALLLE-NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF  352 (353)
Q Consensus       302 A~~~g~~~~v~~Ll~-~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~  352 (353)
                      |+.+|+.++|++|++ .|++++.+|.+|+||||+|+.   .+++++|+++|.
T Consensus       179 A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~  227 (229)
T d1ixva_         179 ALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVV  227 (229)
T ss_dssp             HHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCC
T ss_pred             hcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCC
Confidence            999999999999997 599999999999999999984   589999999874


No 28 
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85  E-value=5.4e-21  Score=158.69  Aligned_cols=96  Identities=21%  Similarity=0.367  Sum_probs=90.6

Q ss_pred             cCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 018578          225 VGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY  301 (353)
Q Consensus       225 ~~~~g~t~Lh~Aa~~---g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~  301 (353)
                      .+..|+||||+|+..   |+.++|++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+
T Consensus        41 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~  120 (154)
T d1dcqa1          41 GHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI  120 (154)
T ss_dssp             CSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             CCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhccccccccccccccccccccccCccccccCCCCCCHHHH
Confidence            356789999999975   67899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHHCCCC
Q 018578          302 AAGYGRKECVALLLENGAA  320 (353)
Q Consensus       302 A~~~g~~~~v~~Ll~~gad  320 (353)
                      |+.+|+.+++++|++.++.
T Consensus       121 A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1         121 AKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHHTTCHHHHHHHHHHHTT
T ss_pred             HHHcCCHHHHHHHHHhCCC
Confidence            9999999999999998654


No 29 
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84  E-value=1.1e-21  Score=171.47  Aligned_cols=124  Identities=26%  Similarity=0.274  Sum_probs=102.0

Q ss_pred             CCCcHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 018578          228 EDESIVHHTASVGDA----EGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA  303 (353)
Q Consensus       228 ~g~t~Lh~Aa~~g~~----~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~  303 (353)
                      +|.||||+|+..|+.    ++++++...|+++|.+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~   80 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC   80 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCcccccccccccccccccccccccccccccccccccccccc
Confidence            589999999999985    4566677789999999999999999999999999999999999999999988888888888


Q ss_pred             HcCCHHHHHHHHHCC---------------------------------------CCCCCc-CCCCCCHHHHHHHcCcHHH
Q 018578          304 GYGRKECVALLLENG---------------------------------------AAVTLQ-NMDGKTPIDVAKLNSQHDV  343 (353)
Q Consensus       304 ~~g~~~~v~~Ll~~g---------------------------------------ad~~~~-d~~g~TpL~~A~~~g~~~i  343 (353)
                      ..++.+++++|+..+                                       +.++.. +.+|+||||+|+.+|+.++
T Consensus        81 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~  160 (221)
T d1iknd_          81 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL  160 (221)
T ss_dssp             HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred             ccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHH
Confidence            777777666666544                                       344443 3579999999999999999


Q ss_pred             HHHHHhcC
Q 018578          344 LKLLEKDA  351 (353)
Q Consensus       344 v~~Ll~~~  351 (353)
                      +++|+++|
T Consensus       161 v~~Ll~~g  168 (221)
T d1iknd_         161 VSLLLKCG  168 (221)
T ss_dssp             HHHHHTTT
T ss_pred             HHHHHhcC
Confidence            99999876


No 30 
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84  E-value=1.4e-20  Score=154.54  Aligned_cols=122  Identities=31%  Similarity=0.423  Sum_probs=116.8

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 018578          230 ESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKE  309 (353)
Q Consensus       230 ~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~~  309 (353)
                      .||||.||..|+.++|++||++|++++ .|..|+||||+|+..++.++++.++.........+..+.+++++++...+.+
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCccccccccccccccccccccccccccccccccccccccccccccce
Confidence            489999999999999999999999887 6899999999999999999999999999888888889999999999999999


Q ss_pred             HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCC
Q 018578          310 CVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF  352 (353)
Q Consensus       310 ~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~  352 (353)
                      ++++|+.+|++++.+|.+|+||||+|+..|+.+++++|+++|.
T Consensus        82 ~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~ga  124 (153)
T d1awcb_          82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA  124 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             eeecccccCCccccccccCchHHHhhhhcchhheeeecccccc
Confidence            9999999999999999999999999999999999999999874


No 31 
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.83  E-value=2.7e-21  Score=153.20  Aligned_cols=90  Identities=23%  Similarity=0.326  Sum_probs=87.7

Q ss_pred             CcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Q 018578          263 RTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHD  342 (353)
Q Consensus       263 ~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~  342 (353)
                      .|||++||..|+.++|++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCC
Q 018578          343 VLKLLEKDAF  352 (353)
Q Consensus       343 iv~~Ll~~~~  352 (353)
                      ++++|+++|.
T Consensus        83 ~v~~Ll~~Ga   92 (118)
T d1myoa_          83 CVKLLLSKGA   92 (118)
T ss_dssp             HHHHHHTTCC
T ss_pred             hhhhhhcccc
Confidence            9999999873


No 32 
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83  E-value=5.8e-21  Score=153.84  Aligned_cols=88  Identities=26%  Similarity=0.263  Sum_probs=86.2

Q ss_pred             cHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Q 018578          264 TALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDV  343 (353)
Q Consensus       264 t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~i  343 (353)
                      ++||.||..|+.++|++|+++|+|++.+|..|+||||+||..|+.+++++|+++|++++.+|.+|+||||+|+.+|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcC
Q 018578          344 LKLLEKDA  351 (353)
Q Consensus       344 v~~Ll~~~  351 (353)
                      +++|+++|
T Consensus        83 v~~Ll~~g   90 (130)
T d1ycsb1          83 CKFLVESG   90 (130)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHcC
Confidence            99999986


No 33 
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80  E-value=8.3e-20  Score=145.88  Aligned_cols=93  Identities=19%  Similarity=0.207  Sum_probs=86.3

Q ss_pred             hhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-cHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 018578          223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGR-TALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY  301 (353)
Q Consensus       223 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~-t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~  301 (353)
                      +..+..|.|+||+|+ .|+.+++++|+++|++++.++..+. ||||+||..|+.++|++|+++|++++.+|..|+||||+
T Consensus        30 n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~  108 (125)
T d1bi7b_          30 NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDL  108 (125)
T ss_dssp             TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHH
T ss_pred             ccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCHHHH
Confidence            455788999999774 7999999999999999999988775 69999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHH
Q 018578          302 AAGYGRKECVALLLE  316 (353)
Q Consensus       302 A~~~g~~~~v~~Ll~  316 (353)
                      |+.+|+.+|+++|++
T Consensus       109 A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_         109 AEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHTCHHHHHHHSS
T ss_pred             HHHcCCHHHHHHHHh
Confidence            999999999999975


No 34 
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}
Probab=99.80  E-value=3e-21  Score=180.91  Aligned_cols=97  Identities=16%  Similarity=0.137  Sum_probs=82.2

Q ss_pred             hhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC--CCCCcHHHHHHhcCCHHHHHHHHHcCCCC---CCCCCCCCc
Q 018578          223 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEED--SEGRTALHFACGYGEVKCAQILLEAGANV---DALDKNKNT  297 (353)
Q Consensus       223 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d--~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi---~~~d~~G~T  297 (353)
                      +..+..|+||||+||..|+.++|++|++.|++++..+  ..|+||||+||..|+.++|++|++.|++.   +..+..|.|
T Consensus       120 n~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t  199 (346)
T d2ajaa1         120 KVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA  199 (346)
T ss_dssp             C--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHH
T ss_pred             cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcc
Confidence            4456788999999999999999999999999988765  46999999999999999999999998764   334455778


Q ss_pred             HHHHHHHcCCHHHHHHHHHCCC
Q 018578          298 ALHYAAGYGRKECVALLLENGA  319 (353)
Q Consensus       298 pLh~A~~~g~~~~v~~Ll~~ga  319 (353)
                      |||+|+.+|+.++|++|+++|+
T Consensus       200 ~l~~A~~~g~~~iv~~Ll~~ga  221 (346)
T d2ajaa1         200 FRWAAVGRGHHNVINFLLDCPV  221 (346)
T ss_dssp             HHHHHSTTCCHHHHHHHTTSHH
T ss_pred             hhhHHhhcCHHHHHHHHHhCCC
Confidence            8888999999999999987763


No 35 
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.79  E-value=1.7e-19  Score=163.23  Aligned_cols=124  Identities=31%  Similarity=0.444  Sum_probs=118.7

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc
Q 018578          226 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY  305 (353)
Q Consensus       226 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~  305 (353)
                      ...+.|+|+.||..|++++|++||+.|+|+|.+|..|+||||+|+..|+.++|++|+++|++.+..+..+.|||++|+..
T Consensus        37 ~~~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~  116 (291)
T d1s70b_          37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC  116 (291)
T ss_dssp             EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccc
Confidence            34567999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Q 018578          306 GRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK  349 (353)
Q Consensus       306 g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~  349 (353)
                      ++.++++.|+++|+..+..|..+.+|+++|+..++.+++..|+.
T Consensus       117 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  160 (291)
T d1s70b_         117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN  160 (291)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred             cccchhhcccccCcccccccccCccccccccccccchhcccccc
Confidence            99999999999999999999999999999999999999888875


No 36 
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.77  E-value=2.1e-19  Score=154.58  Aligned_cols=111  Identities=32%  Similarity=0.436  Sum_probs=102.4

Q ss_pred             HHHHHHHHHcCCCCCC-CCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC------------------------------
Q 018578          242 AEGLKNALAAGADKDE-EDSEGRTALHFACGYGEVKCAQILLEAGANVDA------------------------------  290 (353)
Q Consensus       242 ~~~v~~Ll~~g~d~~~-~d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~------------------------------  290 (353)
                      .++|++|+++|+|++. .|.+|.||||+||.+|+.+++++|+..|++++.                              
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT   81 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTC
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccccccccccccccccccccccccccc
Confidence            4799999999999987 589999999999999999999999999875443                              


Q ss_pred             -------------------------------------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Q 018578          291 -------------------------------------LDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPID  333 (353)
Q Consensus       291 -------------------------------------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~  333 (353)
                                                           ++..|+||||+++.++..+++..|++++++++.+|.+|+||||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~  161 (209)
T d1ot8a_          82 NLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLF  161 (209)
T ss_dssp             CTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred             ccccccccccccccccccccchhhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccc
Confidence                                                 3557889999999999999999999999999999999999999


Q ss_pred             HHHHcCcHHHHHHHHhcCC
Q 018578          334 VAKLNSQHDVLKLLEKDAF  352 (353)
Q Consensus       334 ~A~~~g~~~iv~~Ll~~~~  352 (353)
                      +|+.+|+.+++++|+++|.
T Consensus       162 ~A~~~g~~~~v~~Ll~~ga  180 (209)
T d1ot8a_         162 LAAREGSYEASKALLDNFA  180 (209)
T ss_dssp             HHHHTTCHHHHHHHHHTTC
T ss_pred             hhccccHHHHHHHHHHCCC
Confidence            9999999999999999873


No 37 
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76  E-value=1.1e-17  Score=150.06  Aligned_cols=136  Identities=27%  Similarity=0.298  Sum_probs=111.4

Q ss_pred             hhcCcchhhhcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC----------------------------------
Q 018578          215 DNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS----------------------------------  260 (353)
Q Consensus       215 ~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~g~d~~~~d~----------------------------------  260 (353)
                      ...|.++....+..|+||||+|+..|+.+++++|++.+...+..+.                                  
T Consensus        25 l~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (285)
T d1wdya_          25 LEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY  104 (285)
T ss_dssp             HHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred             HHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCCccccchhhhhcccccccccC
Confidence            3455565555567799999999999999999999987654432221                                  


Q ss_pred             ------------------------------------------CCCcHHHHHHhcCCHHHHHHHHHc-CCCCCCCCCCCCc
Q 018578          261 ------------------------------------------EGRTALHFACGYGEVKCAQILLEA-GANVDALDKNKNT  297 (353)
Q Consensus       261 ------------------------------------------~g~t~Lh~Aa~~g~~~~v~~Ll~~-gadi~~~d~~G~T  297 (353)
                                                                .|.||||+||.+|+.+++++|++. |++++..+..|.+
T Consensus       105 ~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~  184 (285)
T d1wdya_         105 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN  184 (285)
T ss_dssp             CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCC
T ss_pred             CCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCc
Confidence                                                      378889999999999999999864 7889999988988


Q ss_pred             HHHHHHHcC----CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhc
Q 018578          298 ALHYAAGYG----RKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD  350 (353)
Q Consensus       298 pLh~A~~~g----~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  350 (353)
                      +++.+...+    ...++++|+++|++++.+|..|.||||+|+.+|+.+++++|++.
T Consensus       185 ~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~  241 (285)
T d1wdya_         185 ALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ  241 (285)
T ss_dssp             HHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHS
T ss_pred             ccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHHc
Confidence            888776543    34688999999999999999999999999999999999999974


No 38 
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.72  E-value=8.1e-18  Score=153.96  Aligned_cols=102  Identities=17%  Similarity=0.200  Sum_probs=85.6

Q ss_pred             HcCCCCCCC-CCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH-------HHHHHH-------
Q 018578          250 AAGADKDEE-DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRK-------ECVALL-------  314 (353)
Q Consensus       250 ~~g~d~~~~-d~~g~t~Lh~Aa~~g~~~~v~~Ll~~gadi~~~d~~G~TpLh~A~~~g~~-------~~v~~L-------  314 (353)
                      ..+.++|.. |..|+||||+||..|+.++|++|+++|++++.+|..|+||||+||..++.       +++++|       
T Consensus        94 ~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~~~~~~  173 (301)
T d1sw6a_          94 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE  173 (301)
T ss_dssp             TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEE
T ss_pred             ccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhcccchhhhhHHHHHHHHhhhhhhc
Confidence            457788866 89999999999999999999999999999999999999999999976531       233322       


Q ss_pred             -----------------------------------HHCCC-------------------------------------CCC
Q 018578          315 -----------------------------------LENGA-------------------------------------AVT  322 (353)
Q Consensus       315 -----------------------------------l~~ga-------------------------------------d~~  322 (353)
                                                         +..+.                                     .++
T Consensus       174 d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in  253 (301)
T d1sw6a_         174 DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN  253 (301)
T ss_dssp             CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTT
T ss_pred             ccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhcCcc
Confidence                                               22221                                     167


Q ss_pred             CcCCCCCCHHHHHHHcCcHHHHHHHHhcC
Q 018578          323 LQNMDGKTPIDVAKLNSQHDVLKLLEKDA  351 (353)
Q Consensus       323 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~  351 (353)
                      .+|.+|+||||+|+.+|+.++|++|+++|
T Consensus       254 ~~D~~G~TpLh~A~~~g~~~iv~~Ll~~G  282 (301)
T d1sw6a_         254 AQDSNGDTCLNIAARLGNISIVDALLDYG  282 (301)
T ss_dssp             CCCTTSCCHHHHHHHHCCHHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence            88999999999999999999999999986


No 39 
>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]}
Probab=78.27  E-value=1.4  Score=30.47  Aligned_cols=75  Identities=15%  Similarity=0.159  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHhccCCcCCCCCCCChHHHHHHHHHhhc------CcHHHHHHHHHhhhhcCCHHHHhhhhhcCCCCChhH
Q 018578           83 FNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQ  156 (353)
Q Consensus        83 ~~~~a~q~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~------nP~~~~mae~~g~~~m~dp~~~~m~e~l~~~~~~~~  156 (353)
                      |+..++.+.+.-    ..+..+..+.+++|+-++|.+.      .|.++.+..+.         .+..|..++.....+.
T Consensus         6 F~~A~~~v~~~~----~~~~~~~~~~L~lY~lyKQat~G~~~~~~P~~~~~~~~~---------Kw~AW~~l~gms~~eA   72 (89)
T d1hbka_           6 FEECVSFINGLP----RTINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRK---------KYEAWKSVENLNREDA   72 (89)
T ss_dssp             HHHHHHHHHHSC----TTCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHH---------HHHHHHHTTTCCHHHH
T ss_pred             HHHHHHHHHhCC----CCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHH---------HHHHHHHcCCCCHHHH
Confidence            666777665421    1234567788899999999886      45555555544         3888899999888888


Q ss_pred             HHHHHHHhhc-CCCh
Q 018578          157 IEERMAKIKE-DPSL  170 (353)
Q Consensus       157 ~~~~l~~l~~-~p~~  170 (353)
                      +..++..+.. .|.|
T Consensus        73 ~~~Yi~~v~~l~p~w   87 (89)
T d1hbka_          73 QKRYVDIVSEIFPYW   87 (89)
T ss_dssp             HHHHHHHHHHHCTTT
T ss_pred             HHHHHHHHHHHcccc
Confidence            8888777665 4554


No 40 
>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]}
Probab=65.19  E-value=2.2  Score=29.21  Aligned_cols=67  Identities=16%  Similarity=0.273  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHhccCCcCCCCCCCChHHHHHHHHHhhc------CcHHHHHHHHHhhhhcCCHHHHhhhhhcCCCCChhH
Q 018578           83 FNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQ------NPQFMTMAERLGNALMQDPSMSHMMESLTNPTKKDQ  156 (353)
Q Consensus        83 ~~~~a~q~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~------nP~~~~mae~~g~~~m~dp~~~~m~e~l~~~~~~~~  156 (353)
                      |+++++.+++...      ..+..+.+++|+-++|.+.      .|.++.+..+..         |..|..+.+....+.
T Consensus         5 F~~A~~~v~~~~~------~~~~~~~L~LYalyKQat~Gd~~~~~P~~~~~~~~aK---------w~AW~~~~gms~~eA   69 (86)
T d1hb6a_           5 FDKAAEEVKHLKT------KPADEEMLFIYSHYKQATVGDINTERPGMLDFKGKAK---------WDAWNELKGTSKEDA   69 (86)
T ss_dssp             HHHHHHHGGGCSS------CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHH---------HHHHHHTTTCCHHHH
T ss_pred             HHHHHHHHHhCCC------CcCHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHH---------HHHHHHcCCCCHHHH
Confidence            6777777644221      2355677899999999875      566666666654         788888888888777


Q ss_pred             HHHHHHHh
Q 018578          157 IEERMAKI  164 (353)
Q Consensus       157 ~~~~l~~l  164 (353)
                      ...++..+
T Consensus        70 ~~~YI~~v   77 (86)
T d1hb6a_          70 MKAYIDKV   77 (86)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            76666543


No 41 
>d2f4mb1 a.189.1.1 (B:275-332) XPC-binding domain of Rad23 homolog B (Hhr23b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.67  E-value=40  Score=20.71  Aligned_cols=18  Identities=28%  Similarity=0.660  Sum_probs=10.4

Q ss_pred             CCCCccHHHHHHHHhcCC
Q 018578           64 LLNDPSIKELAEQIAKDP   81 (353)
Q Consensus        64 ~~~~~~~~~~~~~~~~~p   81 (353)
                      |-++|....+-+.+-+||
T Consensus         5 Lr~~PqFq~lR~~vq~nP   22 (58)
T d2f4mb1           5 LRNQPQFQQMRQIIQQNP   22 (58)
T ss_dssp             GTTCHHHHHHHHHHHHCG
T ss_pred             HhcChHHHHHHHHHHHCH
Confidence            455665555555555666


Done!