BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018582
(353 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/353 (79%), Positives = 311/353 (88%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+TEKAEAL+E+MKEL LG SSMP+NSLMTLY K G PEKIP IIQE+K+ IMPDSYTYN
Sbjct: 137 LTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYN 196
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+WMRALAAVNDISG ERVIEEMKRDGRVA+DWTT+SNLASIYV+AG+FEKAE+ALKELE
Sbjct: 197 IWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEK 256
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RNA RDL+A+QFLITLYG+ GNL EVYR+WRSLRLAFP TAN+SYLNMIQVLVNLKDLPG
Sbjct: 257 RNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPG 316
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEKCF+EWESGC+ YDIRV N +IGAYAK+G LE AEELKE ARRRGA PNAKTWEIF
Sbjct: 317 AEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLA 376
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+L+N +MK AVDC+ AI TGRGDG KWVPS E I FM+HFEQEKDVDGAEGFLEILK
Sbjct: 377 YHLKNREMKQAVDCVANAISTGRGDGQKWVPSPEIIGVFMQHFEQEKDVDGAEGFLEILK 436
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
V+DLGVEVFE LIR YAAAGRTSPVM RRLKME VEVS++ KKLLE + VE
Sbjct: 437 STVEDLGVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCKKLLEEVSVE 489
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 281/353 (79%), Positives = 308/353 (87%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTE+AEAL+EKMKELNLG SSM +NSLMTLY K G PE+IP IIQEMK+ SIMPDSYTYN
Sbjct: 138 MTEEAEALMEKMKELNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKSDSIMPDSYTYN 197
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAAVNDISGAERVIEEMKRDGRVAADWTT+SNLASIYV+A LFEKAE+ LKELE
Sbjct: 198 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFEKAEKTLKELEK 257
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RN HRD SA+QFLITLYG+ GNL E+YRIWRSLRLAFP T+NISYLNMIQVLVNLKDLPG
Sbjct: 258 RNVHRDHSAFQFLITLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNMIQVLVNLKDLPG 317
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEKCF+EWES C+ YDIRV NV+I AYAK+G LE AEELKERA RGA PNAKTWEIFSD
Sbjct: 318 AEKCFREWESNCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAKPNAKTWEIFSD 377
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YY NGD+KL+V+CL AI GRGDG KW+PS E + +FM HFEQ+KDVDGAEGF+EILK
Sbjct: 378 YYFENGDIKLSVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQKDVDGAEGFIEILK 437
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
KA DD+ VFE LIRTYAAAGRTS V+ RRLKME VEVSEA +KLLE ICVE
Sbjct: 438 KATDDVEANVFESLIRTYAAAGRTSQVLRRRLKMENVEVSEAGQKLLEMICVE 490
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/353 (78%), Positives = 311/353 (88%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTE+AEAL+EKMKELNLG SSM +NSLMTLY K G PE+IPAIIQEMKA ++MPDSYTYN
Sbjct: 138 MTEEAEALIEKMKELNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKADNVMPDSYTYN 197
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAAVNDISG ERVIEEMKRDGRVAA+WTT+SNLASIYV+AG F+KAE+ALKELE
Sbjct: 198 VWMRALAAVNDISGVERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKAEKALKELEK 257
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
NA++DL A+QFLITLYG+TG L EVYRIWRSLRLAFP TANISYLNMIQVLVNLKD+PG
Sbjct: 258 INANKDLFAFQFLITLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQVLVNLKDVPG 317
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEKCF+EWESGC+TYDIRV NV+I AYAKEG ++ AEELKERARRRGA PN+KTWEIF D
Sbjct: 318 AEKCFREWESGCSTYDIRVANVVISAYAKEGLVDKAEELKERARRRGAKPNSKTWEIFCD 377
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YYL+NGD+KL VDC+ A+ GRG+G KWVPS + + M HFEQ+KDVDGAE +EILK
Sbjct: 378 YYLKNGDVKLGVDCIANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQKDVDGAEDLIEILK 437
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
KAVDD+ VEVFE LIRTYAAAGR S +M RRLKME VEVS+ +KLLEAICVE
Sbjct: 438 KAVDDVAVEVFESLIRTYAAAGRKSQLMRRRLKMENVEVSDDCQKLLEAICVE 490
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/353 (77%), Positives = 300/353 (84%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTEK+E L+EKMKEL+L SSMP+NSLMTLY K G PEKIP++IQEMKAS++M DSYTYN
Sbjct: 138 MTEKSEGLMEKMKELSLPLSSMPYNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDSYTYN 197
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAAVNDISG ERV +EMKR G+V DWTT+SNLASI+V+AGLF+KAE ALKELE
Sbjct: 198 VWMRALAAVNDISGVERVHDEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVALKELEK 257
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RNA +DL+AYQFLITLYG+TGNL EVYR+WRSLRLAFP TANISYLNMIQVLVNLKDLPG
Sbjct: 258 RNAFKDLTAYQFLITLYGRTGNLYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPG 317
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEKCF+EWE GC TYDIRV NV+I AY K LE AEELKERARRRGA PNAKT EIF D
Sbjct: 318 AEKCFREWECGCPTYDIRVANVLIRAYVKLDMLEKAEELKERARRRGAKPNAKTLEIFMD 377
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YYL GD KLAVD L +AI GRG+G KWVPSS I MRHFEQEKDVDGAE FLEILK
Sbjct: 378 YYLLKGDFKLAVDYLNEAISMGRGNGEKWVPSSRIISIMMRHFEQEKDVDGAEEFLEILK 437
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
K+V+ GVEVFE LIRTYAAAGR S M RRLKME VEVSE ++KLLEAI VE
Sbjct: 438 KSVESPGVEVFESLIRTYAAAGRISSAMQRRLKMENVEVSEGTQKLLEAISVE 490
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust.
Identities = 244/353 (69%), Positives = 295/353 (83%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+TEKAE LL KMKELN+ SSM +NSLMTLY KTG EK+PA+IQE+KA ++MPDSYTYN
Sbjct: 138 LTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYN 197
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAA NDISG ERVIEEM RDGRVA DWTT+SN+ASIYV+AGL +KAE+AL+ELE
Sbjct: 198 VWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEM 257
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+N RD +AYQFLITLYG+ G L+EVYRIWRSLRLA P T+N++YLNMIQVLV L DLPG
Sbjct: 258 KNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPG 317
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE FKEW++ C+TYDIR+ NV+IGAYAKEG +E A+ELKE+A RRG NAKTWEIF D
Sbjct: 318 AETLFKEWQANCSTYDIRIVNVLIGAYAKEGLIEKAKELKEKAPRRGGKANAKTWEIFMD 377
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YY+++GDM A++C+ KA+ G+GDGGKW+PS ET+RT M +FEQ+KDV+GAE LEILK
Sbjct: 378 YYVKSGDMAHALECMSKAVSIGKGDGGKWIPSQETVRTLMSYFEQKKDVNGAENLLEILK 437
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
D++G E+FE LIRTYAAAG++ P M RRLKME VEV+E +KKLL+ + E
Sbjct: 438 NGTDNIGAEIFESLIRTYAAAGKSHPAMRRRLKMENVEVNEVTKKLLDEVSQE 490
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 1/156 (0%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T+ +L + Y + L EKAE L +++ N +Y L+TLY +TG +V + + L
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGQTEKVPAMIQEL 184
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGR 212
+ + +Y ++ L D+ G E+ +E G D + M Y G
Sbjct: 185 KAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGL 244
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ AE+ + + + ++ Y R G +
Sbjct: 245 SQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKL 280
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/351 (68%), Positives = 294/351 (83%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+TEKAE LL KMKELN+ SSM +NSLMTLY KTG EK+PA+IQE+KA ++MPDSYTYN
Sbjct: 138 LTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYN 197
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAA NDISG ERVIEEM RDGRVA DWTT+SN+ASIYV+AGL +KAE+AL+ELE
Sbjct: 198 VWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEM 257
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+N RD +AYQFLITLYG+ G L+EVYRIWRSLRLA P T+N++YLNMIQVLV L DLPG
Sbjct: 258 KNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPG 317
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE FKEW++ C+TYDIR+ NV+IGAYA+EG ++ A ELKE+A RRG NAKTWEIF D
Sbjct: 318 AETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMD 377
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YY+++GDM A++C+ KA+ G+GDGGKW+PS ET+R M +FEQ+KDV+GAE LEILK
Sbjct: 378 YYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILK 437
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
D++G E+FEPLIRTYAAAG++ P M RRLKME VEV+EA+KKLL+ +
Sbjct: 438 NGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEVS 488
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 1/156 (0%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T+ +L + Y + L EKAE L +++ N +Y L+TLY +TG +V + + L
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQEL 184
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGR 212
+ + +Y ++ L D+ G E+ +E G D + M Y G
Sbjct: 185 KAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGL 244
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ AE+ + + + ++ Y R G +
Sbjct: 245 SQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKL 280
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/353 (71%), Positives = 286/353 (81%), Gaps = 3/353 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+TEKAEAL EK+KELNL + +P+NSLMTLY+K G P+K+ IIQEMKA+++ D YTY
Sbjct: 140 LTEKAEALFEKIKELNLPVTPVPYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYI 199
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAA+NDISG ERVI+EMKRDG V DWTT+SNLASIYV A +FEKA +ALK+LE
Sbjct: 200 VWMRALAALNDISGVERVIDEMKRDG-VKGDWTTYSNLASIYVNANMFEKAAKALKDLEK 258
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N RDL +QFLITLYGQ G+L+EVYR+WRSLRLAFP TANISYLNMIQ L LKDLPG
Sbjct: 259 INTRRDLIGFQFLITLYGQIGDLTEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPG 318
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEKCFKEWESG TYDIR+ N +IGAY K G LE A LKERA RRGA PNAKTWE F +
Sbjct: 319 AEKCFKEWESGSPTYDIRIPNALIGAYTKGGLLEKAMALKERALRRGARPNAKTWEFFLN 378
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YYL+NGD KLA DC+ KAI G+GD GKW+PS E I++FM HFEQEKDVDGAE FLEI+K
Sbjct: 379 YYLKNGDFKLAGDCVAKAI--GKGDRGKWIPSPEIIKSFMSHFEQEKDVDGAESFLEIVK 436
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
K VD L EVFE LIRTY+AAGRTS M RRLKME VEVSEA KKLL I +E
Sbjct: 437 KTVDSLESEVFESLIRTYSAAGRTSSSMSRRLKMENVEVSEACKKLLNKISIE 489
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
++S+L + Y + L EKAE ++++ N Y L+TLY + G +V I + +
Sbjct: 127 SYSSLLNCYCKELLTEKAEALFEKIKELNLPVTPVPYNSLMTLYSKIGRPDKVCTIIQEM 186
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
+ A +Y+ ++ L L D+ G E+ E + D + + Y
Sbjct: 187 KAANVTFDPYTYIVWMRALAALNDISGVERVIDEMKRDGVKGDWTTYSNLASIYVNANMF 246
Query: 214 ENA 216
E A
Sbjct: 247 EKA 249
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/353 (69%), Positives = 273/353 (77%), Gaps = 45/353 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+TEKAEAL+E+MKEL LG SSMP+NSLMTLY K G PEKIP IIQE+K+ IMPDSYTYN
Sbjct: 137 LTEKAEALMERMKELKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYN 196
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+WMRALAAVNDISG ERVIEEMKRDGRVA+DWTT+SNLASIYV+AG+FEKAE+ALKELE
Sbjct: 197 IWMRALAAVNDISGVERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEK 256
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RNA RDL+A+QFLITLYG+ GNL EVYR+WRSLRLAFP TAN+SYLNMIQVLVNLKDLPG
Sbjct: 257 RNACRDLTAFQFLITLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPG 316
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEKCF+EWESGC+ YDIRV N +IGAYAK+G LE AEELKE ARRRGA PNAKTWEIF
Sbjct: 317 AEKCFREWESGCSIYDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLA 376
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+L+N +MK AVDC+ AI T
Sbjct: 377 YHLKNREMKQAVDCVANAIST--------------------------------------- 397
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
GVEVFE LIR YAAAGRTSPVM RRLKME VEVS++ KKLLE + VE
Sbjct: 398 ------GVEVFESLIRIYAAAGRTSPVMRRRLKMENVEVSDSCKKLLEEVSVE 444
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/292 (70%), Positives = 247/292 (84%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KAEAL+EKMKEL L ++M +NSLMTLY+KTG PEK+PA++QEMKAS IM +YTYN
Sbjct: 68 IPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIMLQTYTYN 127
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAAV DI G ERV++EMKRDGRVA DWTT+SNLASIYVE+ +FEKAE ALKELE
Sbjct: 128 VWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKAENALKELEK 187
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RN +DLS YQFL+TLYG+TGNL EVYR+WRSLRLAFP T N++YLNMIQ LV LKDL G
Sbjct: 188 RNTSQDLSPYQFLLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQRLVTLKDLKG 247
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEKCF +WES C YDIR+ NV++GAY K+G L+ A+ELK+RA +RGA PNAKTWEIF +
Sbjct: 248 AEKCFADWESSCTNYDIRIANVLMGAYIKDGLLQQAKELKKRACKRGAKPNAKTWEIFLE 307
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+YL+ G++KLAVDC+E+A+ GRGDG KWVPSS+ + + M HFEQ KDVDGA
Sbjct: 308 HYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSSKVVNSIMGHFEQSKDVDGA 359
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/292 (69%), Positives = 246/292 (84%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KAEAL+EKMKEL L ++M +NSLMTLY+KTG PEK+PA++QEMKAS IM +YTYN
Sbjct: 68 IPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDIMLQTYTYN 127
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAAV DI G ERV++EMKRDGRVA DWTT+SNLASIYVE+ +F+KAE ALKELE
Sbjct: 128 VWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKAENALKELEK 187
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RN R+LS YQFL+TLYG+TGNL EVYR+WRSLRLAFP T N++YLNMIQ LV LKDL G
Sbjct: 188 RNTSRELSPYQFLLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQRLVTLKDLKG 247
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEKCF +WES C YDIR+ NV++GAY K+G L+ A+ELK+RA +RGA PNAKTWEIF +
Sbjct: 248 AEKCFADWESSCTNYDIRIANVLMGAYIKDGSLQQAKELKKRACKRGAKPNAKTWEIFLE 307
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+YL+ G++KLAVDC+E+A+ GRGDG KWVPS+ + + M HFEQ KDVDGA
Sbjct: 308 HYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSTNVVNSIMGHFEQSKDVDGA 359
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/390 (57%), Positives = 266/390 (68%), Gaps = 37/390 (9%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTEKAEAL+ KMKELN F++M +NSLMTLY K EK+P++IQ+MKA ++PD YTYN
Sbjct: 134 MTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYN 193
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAA DI G ERVIEEMKRDGRV DWTT+SNLASIYV+AGLFEKAE ALKELE
Sbjct: 194 VWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEK 253
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N DL AYQFLITLY +T NL EV+R+WRSL+ P AN+SYLNMIQ L NLKDLPG
Sbjct: 254 WNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPG 313
Query: 181 AEKCFKEWES-------------GCA------------------------TYDIRVTNVM 203
AE CFKEWE+ G A YDIRV N M
Sbjct: 314 AEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAM 373
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I AY EG + A +K+RA+ RG NAKTWEIF ++YL+ GD+K+ C ++AI G
Sbjct: 374 IKAYITEGMFDKAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADRAIKKGH 433
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
G WVP E T M +FE+ KDVDGAE F+E+LKK DLG VFEPL+RTYAAAG+
Sbjct: 434 SAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAGK 493
Query: 324 TSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
P M RLK+E VEVSE + KLL+++C++
Sbjct: 494 KLPGMRHRLKIENVEVSEETAKLLDSVCID 523
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/390 (57%), Positives = 265/390 (67%), Gaps = 37/390 (9%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTEKAEAL+ KMKELN F++M +NSLMTLY K EK+P++IQ+MKA ++PD YTYN
Sbjct: 134 MTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQHEKVPSVIQDMKADDVLPDIYTYN 193
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAA DI G ERVIEEMKRDGRV DWTT+SNLASIYV+AGLFEKAE ALKELE
Sbjct: 194 VWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSNLASIYVDAGLFEKAEAALKELEK 253
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N DL AYQFLITLY +T NL EV+R+WRSL+ P AN+SYLNMIQ L NLKDLPG
Sbjct: 254 WNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQPRRANMSYLNMIQALANLKDLPG 313
Query: 181 AEKCFKEWES-------------GCA------------------------TYDIRVTNVM 203
AE CFKEWE+ G A YDIRV N M
Sbjct: 314 AEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKATKDKGTDGELKHPKYDIRVANAM 373
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I Y EG + A +K+RA+ RG NAKTWEIF ++YL+ GD+K+ C ++AI G
Sbjct: 374 IKEYITEGMFDQAVAVKKRAKMRGGRLNAKTWEIFMEHYLKEGDLKMVHWCADRAIKKGH 433
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
G WVP E T M +FE+ KDVDGAE F+E+LKK DLG VFEPL+RTYAAAG+
Sbjct: 434 SAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAGK 493
Query: 324 TSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
P M RLK+E VEVSE + KLL+++C++
Sbjct: 494 KLPGMRHRLKIENVEVSEETAKLLDSVCID 523
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/403 (55%), Positives = 269/403 (66%), Gaps = 50/403 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTEKAEAL+EKMKELN F++M +NSLMTLY K PEK+P+IIQ+MKA ++PD YTYN
Sbjct: 134 MTEKAEALMEKMKELNFAFTAMSYNSLMTLYTKVNQPEKVPSIIQDMKADDVLPDVYTYN 193
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMR+LAA DISG ERVIEEMKRDGRV DWTT+SNLASIYVEAGLFEKAE ALKELE
Sbjct: 194 VWMRSLAARQDISGVERVIEEMKRDGRVVPDWTTYSNLASIYVEAGLFEKAEAALKELEK 253
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RN DL AYQFLITLYG+T NL EV+ +WRSL+ P AN+SYLNMIQVL NLKDLP
Sbjct: 254 RNTSNDLEAYQFLITLYGRTQNLVEVHHVWRSLKRNNPRKANMSYLNMIQVLANLKDLPA 313
Query: 181 AEKCFKEWES-------------------------------------------GCATYD- 196
AE CFKEWE+ G D
Sbjct: 314 AEACFKEWEARYIRPPKTKAIDAVTTETSKLDQESSTTNASNNDSDAKGTEDKGMEEIDM 373
Query: 197 ------IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
IRV N ++ AY EG L+ A LK+RA+ RG N+KTWEIF ++Y++ GD+K
Sbjct: 374 KHPKYDIRVANALMKAYVTEGMLDKAVALKKRAKMRGGRLNSKTWEIFMEHYIKVGDLKN 433
Query: 251 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV 310
A C ++AI G G WVP + T M +FE++KDVDGAE F+E+LKK DLG V
Sbjct: 434 AHWCTDRAIKKGHSSGRIWVPPRDVTETLMGYFEKKKDVDGAEKFVEVLKKVQKDLGTVV 493
Query: 311 FEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
FEPL+RTYAAAG+ P M RLK+E VEVSE KL++++CV+
Sbjct: 494 FEPLVRTYAAAGKKFPGMRHRLKIENVEVSEEIAKLVDSLCVD 536
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/402 (55%), Positives = 266/402 (66%), Gaps = 49/402 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTEKAE+L+ KM ELN F++MPFNSLMT+Y K PEK+P IIQ MKA ++P +TYN
Sbjct: 134 MTEKAESLMAKMSELNFAFTAMPFNSLMTMYTKVNQPEKVPGIIQYMKADDVLPHVFTYN 193
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAA+NDI G ERVIEEMKRDGRVA DWTT+SNLASIYV+AGLFEKAE ALKELE
Sbjct: 194 VWMRALAALNDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVDAGLFEKAEAALKELEK 253
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RN D+ AYQFLITLYG+T NL EV+R+WRSL+ P AN+SYLNMIQVL NLKDLP
Sbjct: 254 RNTSNDVEAYQFLITLYGRTQNLVEVHRVWRSLKRNNPRMANMSYLNMIQVLANLKDLPA 313
Query: 181 AEKCFKEWE-------------SGC----------------------------------- 192
AE CFKEWE SG
Sbjct: 314 AEACFKEWEARHIHPPKTKAKDSGADNISTTDPESSSNLPNNQSGIKETGDEAAKDLQLK 373
Query: 193 -ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
YDIRV N MI AY EG L+ A +K+RA+ G NAKTWEIF +++L+ GD+K+A
Sbjct: 374 HPKYDIRVANAMIKAYIAEGMLDKAVAVKKRAKMHGGRLNAKTWEIFMEHHLKTGDLKMA 433
Query: 252 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
C ++A+ G G WVP T M +FE+ KDVDGAE ++E LKK DLG VF
Sbjct: 434 HWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAEQYVESLKKVQKDLGTPVF 493
Query: 312 EPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
EPL+RTYAAAG+ P M +RLK+E VEV E + +LL++IC +
Sbjct: 494 EPLLRTYAAAGKKFPGMRQRLKIENVEVGEETDQLLDSICAD 535
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/402 (55%), Positives = 267/402 (66%), Gaps = 49/402 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTEKAE+L+EKMKELN F++M FNSLMT+Y K EK+P+IIQ+MKA ++PD +TYN
Sbjct: 134 MTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYN 193
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAA+ DI G ERVIEEMKRDGRVA DWTT+SNLASIYVEAG+FEKAE ALKELE
Sbjct: 194 VWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEK 253
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RN D+ AYQFLITLYG+T NL EV+R+WRSL+ P AN+SYLNMIQVL NLKDL
Sbjct: 254 RNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSA 313
Query: 181 AEKCFKEWE-------------SGC----------------------------------- 192
AE CFKEWE SG
Sbjct: 314 AEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPK 373
Query: 193 -ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
YDIRV N MI AY EG L+ A +K+RA+ RG NAKTWEIF ++YL+ GD+K+A
Sbjct: 374 HPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMA 433
Query: 252 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
C ++A+ G G WVP T M +FE+ KDVDGAE ++ LKK DLG VF
Sbjct: 434 HWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAPVF 493
Query: 312 EPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
EPL+RTYAAAG+ P M +RLK+E VEV E + +LL++IC +
Sbjct: 494 EPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSICAD 535
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T+ L + Y + + EKAE +++++ N ++ L+T+Y + +V I + +
Sbjct: 121 TYGALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDM 180
Query: 154 RL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKE 210
+ P+ +Y ++ L LKD+PG E+ +E + G D + + Y +
Sbjct: 181 KADDVLPDV--FTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEA 238
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
G E AE + +R + + ++ Y R ++
Sbjct: 239 GMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRTQNL 276
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/402 (55%), Positives = 267/402 (66%), Gaps = 49/402 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTEKAE+L+EKMKELN F++M FNSLMT+Y K EK+P+IIQ+MKA ++PD +TYN
Sbjct: 224 MTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYN 283
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAA+ DI G ERVIEEMKRDGRVA DWTT+SNLASIYVEAG+FEKAE ALKELE
Sbjct: 284 VWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEK 343
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RN D+ AYQFLITLYG+T NL EV+R+WRSL+ P AN+SYLNMIQVL NLKDL
Sbjct: 344 RNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSA 403
Query: 181 AEKCFKEWE-------------SGC----------------------------------- 192
AE CFKEWE SG
Sbjct: 404 AEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPK 463
Query: 193 -ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
YDIRV N MI AY EG L+ A +K+RA+ RG NAKTWEIF ++YL+ GD+K+A
Sbjct: 464 HPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMA 523
Query: 252 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
C ++A+ G G WVP T M +FE+ KDVDGAE ++ LKK DLG VF
Sbjct: 524 HWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAPVF 583
Query: 312 EPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
EPL+RTYAAAG+ P M +RLK+E VEV E + +LL++IC +
Sbjct: 584 EPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSICAD 625
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T+ L + Y + + EKAE +++++ N ++ L+T+Y + +V I + +
Sbjct: 211 TYGALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDM 270
Query: 154 RL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKE 210
+ P+ +Y ++ L LKD+PG E+ +E + G D + + Y +
Sbjct: 271 KADDVLPDV--FTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEA 328
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
G E AE + +R + + ++ Y R ++
Sbjct: 329 GMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRTQNL 366
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/402 (55%), Positives = 267/402 (66%), Gaps = 49/402 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTEKAE+L+EKMKELN F++M FNSLMT+Y K EK+P+IIQ+MKA ++PD +TYN
Sbjct: 194 MTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYN 253
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAA+ DI G ERVIEEMKRDGRVA DWTT+SNLASIYVEAG+FEKAE ALKELE
Sbjct: 254 VWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEK 313
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RN D+ AYQFLITLYG+T NL EV+R+WRSL+ P AN+SYLNMIQVL NLKDL
Sbjct: 314 RNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSA 373
Query: 181 AEKCFKEWE-------------SGC----------------------------------- 192
AE CFKEWE SG
Sbjct: 374 AEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPK 433
Query: 193 -ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
YDIRV N MI AY EG L+ A +K+RA+ RG NAKTWEIF ++YL+ GD+K+A
Sbjct: 434 HPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMA 493
Query: 252 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
C ++A+ G G WVP T M +FE+ KDVDGAE ++ LKK DLG VF
Sbjct: 494 HWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAPVF 553
Query: 312 EPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
EPL+RTYAAAG+ P M +RLK+E VEV E + +LL++IC +
Sbjct: 554 EPLVRTYAAAGKKFPGMRQRLKIENVEVGEGTAQLLDSICAD 595
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T+ L + Y + + EKAE +++++ N ++ L+T+Y + +V I + +
Sbjct: 181 TYGALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDM 240
Query: 154 RL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKE 210
+ P+ +Y ++ L LKD+PG E+ +E + G D + + Y +
Sbjct: 241 KADDVLPDV--FTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNLASIYVEA 298
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
G E AE + +R + + ++ Y R ++
Sbjct: 299 GMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRTQNL 336
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/353 (64%), Positives = 254/353 (71%), Gaps = 30/353 (8%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKAE +EKMKEL+L SSMP+NSL+ LY K G PEK+ ++IQEMK S+IM DSYTYN
Sbjct: 147 MIEKAEGFMEKMKELSLPLSSMPYNSLIMLYTKVGQPEKVSSLIQEMKTSNIMLDSYTYN 206
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWMRALAAVNDIS ERV +EM AL ELE
Sbjct: 207 VWMRALAAVNDISSVERVHDEMM------------------------------ALTELEK 236
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RNA +DL+AYQFLIT YG T NL EV+R+WRSLRLAFP TANISYLNMI+VLV KDL G
Sbjct: 237 RNAFKDLTAYQFLITFYGXTSNLYEVFRVWRSLRLAFPKTANISYLNMIRVLVKSKDLLG 296
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
EKCF E E GC TYDIRV NV+I AYAK LE AEELKE ARRRGA PN KT EIF D
Sbjct: 297 EEKCFXEXECGCPTYDIRVVNVLIRAYAKLDMLEKAEELKEHARRRGAKPNGKTLEIFMD 356
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YYL+ G+ K VDCL++AI GR +G KWVP S+ I MR+FEQEKDVDGAE FLEILK
Sbjct: 357 YYLQKGNFKSTVDCLDEAISMGRWNGEKWVPXSKIIDIMMRNFEQEKDVDGAEEFLEILK 416
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
K+++ GVEVFE L RTYAA GR S MLRRLKME V+VSE ++KLLEAI E
Sbjct: 417 KSMESPGVEVFESLTRTYAATGRISSAMLRRLKMENVQVSEGTQKLLEAISEE 469
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 227/352 (64%), Gaps = 4/352 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA L +K+KELN S++ +N++++LY + G PEK+P+++ EM+ I D YTYN
Sbjct: 144 MVDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYN 203
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE- 119
+ M + A+V D E+V+E+MK+ G V DW T+ NLA+IYV+AG +KA AL++LE
Sbjct: 204 LLMNSYASVKDFEAVEQVLEKMKKRG-VERDWFTYGNLANIYVDAGHTKKANYALQKLEQ 262
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N+N H D A++ LI LY +T NL V R W SL+LA P N SYL M+ L L D+
Sbjct: 263 NKNLH-DPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVA 321
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G EKCFKEWESGC+TYD+R++NVM+ +Y +E A L E +RG + KT ++F
Sbjct: 322 GLEKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKLKTLDLFM 381
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+YL+ + LA+ L+ + KW P+ ETI F+ +FE+ KDVD AE F E +
Sbjct: 382 KFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETM 441
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
+K + L ++++ L+RTY AAG+ P+M R+K + +E+S ++KLL+ +C
Sbjct: 442 RK-ISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETEKLLQKVC 492
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+ Y + + + +++ L+ L F ++A +SY NMI + + + E
Sbjct: 131 TYGALLNCYCKENMVDKAVELFKKLKELNFVSSA-LSYNNMISLYLRVGQPEKVPSLVHE 189
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
E D+ N+++ +YA E E++ E+ ++RG + + T+ ++ Y+ G
Sbjct: 190 MEEKDIPADLYTYNLLMNSYASVKDFEAVEQVLEKMKKRGVERDWFTYGNLANIYVDAGH 249
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
K A L+K + K + E R + + + +++G E LK A
Sbjct: 250 TKKANYALQKL------EQNKNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLA 298
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 229/353 (64%), Gaps = 5/353 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKA AL EKM ELN +S+ FN+LM+L+ + G PE +P ++ EMK SI PD++TYN
Sbjct: 159 MEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYN 218
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ M++ A +NDI GAERV+EE+KR+ WTT+SNLA++YV A LFEKAE ALK+LE
Sbjct: 219 ILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEE 278
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D AY FLI+LY NLSEV R+W SL+ AFP T N+SY M+Q L NL D+ G
Sbjct: 279 EMGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDG 338
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ CF+EW+S C ++D+R+ NV + A+ +++AE + A +R + P ++F
Sbjct: 339 LKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMA 398
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
++L+ ++ A+ +E A + + +W P+ E + F+++FE+EKDV+GAE F +ILK
Sbjct: 399 HHLKVREIDTALKYMEAAASEVKNN--EWQPAPERVLAFLKYFEEEKDVEGAEKFCKILK 456
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
+ L ++ L++T AAGRT P M +R+K + +EV SK LL+ + E
Sbjct: 457 N-ISGLDSNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEVD--SKDLLQRVGPE 506
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/352 (42%), Positives = 227/352 (64%), Gaps = 4/352 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA L +K+KELN S++ +N++++LY + G PEK+P+++ EM+ I D YTYN
Sbjct: 148 MLDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYN 207
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE- 119
+ M + A+V D E+V+++MK+ G V DW T+ NLA+IYV+AG +KA AL++LE
Sbjct: 208 LLMNSYASVKDFEAVEQVLDKMKKRG-VERDWFTYGNLANIYVDAGHTKKANYALQKLEQ 266
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N+N H D A++ LI LY +T NL V R W SL+LA P N SYL M+ L L D+
Sbjct: 267 NKNLH-DPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVA 325
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G EKCFKEWESGC+TYD+R++NVM+ +Y +E A L E +RG + KT ++F
Sbjct: 326 GLEKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESIAKRGPELKLKTLDLFM 385
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+YL+ + LA+ L+ + KW P+ ETI F+ +FE+ KDVD AE F E +
Sbjct: 386 KFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETM 445
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
+K + L ++++ L+RTY AAG+ P+M R+K + +E+S ++KLL+ +C
Sbjct: 446 RK-ISRLDSKIYDSLLRTYIAAGKEEPLMSERMKDDGIEISSETEKLLQKVC 496
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 8/174 (4%)
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
Y L+ Y + L + +++ L+ L F ++A +SY NMI + + + E
Sbjct: 136 YGALLNCYCKENMLDKAVELFKKLKELNFVSSA-LSYNNMISLYLRVGQPEKVPSLVHEM 194
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
E D+ N+++ +YA E E++ ++ ++RG + + T+ ++ Y+ G
Sbjct: 195 EEKDIPADLYTYNLLMNSYASVKDFEAVEQVLDKMKKRGVERDWFTYGNLANIYVDAGHT 254
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
K A L+K + K + E R + + + +++G E LK A
Sbjct: 255 KKANYALQKL------EQNKNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLA 302
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 225/363 (61%), Gaps = 16/363 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M+EKA L EKM ++ L +SMPFN+LMTL+ + G PEK+ I+QEMK + P ++TYN
Sbjct: 114 MSEKALTLFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYN 173
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE- 119
+WM++ +ND G +RV++EMK DG+ WTT+SNLA+IYV+AGLF+KAE AL++LE
Sbjct: 174 IWMQSYGCLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEE 233
Query: 120 ------------NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 167
R D AY FLI+LY T NLSEV+R+W SL+ +F T NISYLN
Sbjct: 234 QIECGRDCDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLN 293
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
++Q L LKD+ G KCFKEWES C +YD+ + NV I A + E A + + A +R
Sbjct: 294 VLQALAKLKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRT 353
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
K E+F ++L+N LA+ ++ A + +W P +T+ F+ +FE K
Sbjct: 354 KGLFFKAREMFMVFFLKNHQPDLALKHMKAAFSEAKEI--EWQPDQKTVSAFLNYFEDGK 411
Query: 288 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
DVDGAE +I K+ ++ L + L++TY AAGR +P M +RL+ + +E++ + LL
Sbjct: 412 DVDGAERLCKIWKQ-INRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLL 470
Query: 348 EAI 350
E +
Sbjct: 471 ERV 473
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 223/352 (63%), Gaps = 4/352 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M++KA AL ++M E +SS+PFN+LM++Y + G PEK+P ++ EMK + P S+TYN
Sbjct: 154 MSDKALALFQEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYN 213
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+WM++ +ND G +RV+ E+ DG + WTT+SNLA+IY++AG+FEKAE ALK+LE
Sbjct: 214 IWMQSYGCLNDFQGVDRVLREIVNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLE 273
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R+ AY FLI++Y TGN +EV R+W L+ +F N+SYL M+Q L LKD+
Sbjct: 274 AIMGFRNREAYHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVE 333
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G KCF+EWESGC YD+R+ NV I + + E AE + + A +R P K E F
Sbjct: 334 GVAKCFREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFM 393
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
++L+ + LA+ + A + +W P ET+ + +F EKDVDGAE +IL
Sbjct: 394 LFFLKIHQLDLALKHMRAAF--SESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKIL 451
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
K ++ L V+ L++TY AAG+ +P M +RL+ + +E+S+ + LLE++C
Sbjct: 452 KH-INCLNSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIEISDELEYLLESVC 502
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 222/355 (62%), Gaps = 10/355 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKA L +KM EL + +S+ FN+LMT+Y + HPEK+P +I EMK ++TYN
Sbjct: 124 MEEKALTLFKKMDELKIS-TSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYN 182
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
VWM + A++NDI E ++EEMK + R DWTT+SNLAS YV+AG FEKAE ALK+LE
Sbjct: 183 VWMNSCASLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEE 242
Query: 121 --RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
++ D Y LI+LY T NLSEV RIW +L+ + NISYL M+Q L LKD+
Sbjct: 243 EMKSDKNDRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDI 302
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
G ++ +KEWES C +D+R+ N +IGAY ++ E+A + E A +R P ++ E+F
Sbjct: 303 EGLKRTYKEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMF 362
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
Y+L+ + A LE A+ + +W PS T F+ +FE+EKDV+GAE F I
Sbjct: 363 MVYFLKLKQVDSAFSHLESALSESKEK--EWHPSLATTTAFLNYFEEEKDVEGAEDFARI 420
Query: 299 LK--KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
LK K +D G + L++TY AAG+ +P M +RLK + +E+S ++LL +C
Sbjct: 421 LKRLKCLDASG---YHLLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVC 472
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 219/351 (62%), Gaps = 3/351 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M+EKA L EKM ++ +S+PFN+L++L+ + PEK+ I+QEMK + P ++TYN
Sbjct: 125 MSEKALTLFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYN 184
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+WM++ +ND G ERV++EMK DG+ WTT++NLA+IYV+AG F+KAE ALK++E
Sbjct: 185 MWMQSYGCLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEE 244
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ AY FLITLY T NL EV R+W SL+ F T N+SYL M+ L LKD+ G
Sbjct: 245 QIERDYREAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEG 304
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
KCFKEWES C +YD+R+ NV I A + E A + + A +R E+F
Sbjct: 305 LLKCFKEWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMV 364
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
++L+N + LA+ ++ A + +W P +T+ F +FE EKDV+GAE +ILK
Sbjct: 365 FFLKNHQLDLALKHMKAAFSEVK--EIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILK 422
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
++ L ++ L++TY AAG+ +P M +RL+ + +E++ + LLE +C
Sbjct: 423 H-INRLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVC 472
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/350 (41%), Positives = 211/350 (60%), Gaps = 5/350 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+A EKM ELN +S+PFN++M++Y + PEK+P ++ MK I P TY++WM
Sbjct: 177 KAKAHFEKMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWM 236
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++ ++ND+ G E++I+EM +D W TFSNLA+I+ +AGL+EKAE ALK +E +
Sbjct: 237 QSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKMN 296
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ ++ FLI+LY +EVYR+W SL+ A P N+SYL M+Q + L D+ G +K
Sbjct: 297 PNNRDSHHFLISLYAGISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKK 356
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F EWES C YD+R+ N+ I Y K E AE++ + A + P +K ++ + L
Sbjct: 357 IFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMEKSKGPFSKARQLLMIHLL 416
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK--K 301
NG LA+ LE A+ + +W SSE + F HF++ KDVDGAE F +IL K
Sbjct: 417 ENGKADLAMKHLETAVSDPAENKDEWSWSSELVSLFFLHFKRAKDVDGAEDFCKILSNWK 476
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
VD E LI+TYAAA +T P M RL ++EVSE + LL+ +C
Sbjct: 477 PVD---CETMSFLIKTYAAAEKTCPDMRERLSQHQIEVSEEIQDLLKTVC 523
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 210/349 (60%), Gaps = 1/349 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA+A E M ELN +S+PFN++M++Y + PEK+P ++ MK I P TY++W
Sbjct: 189 EKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIW 248
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M++ ++ND+ G E++I+EM +D W TFSNLA+IY +AGL+EKA+ ALK +E +
Sbjct: 249 MQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKM 308
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ ++ FL++LY EVYR+W SL+ A P N+SYL M+Q + L DL G +
Sbjct: 309 NPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIK 368
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F EWES C YD+R+ N+ I Y K E AE++ + A ++ P +K ++ +
Sbjct: 369 KIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHL 428
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L N LA+ LE A+ + +W SSE + F HFE+ KDVDGAE F +IL
Sbjct: 429 LENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSN- 487
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
L E LI+TYAAA +TSP M RL +++EVSE + LL+ +C
Sbjct: 488 WKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKTVC 536
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 210/349 (60%), Gaps = 1/349 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA+A E M ELN +S+PFN++M++Y + PEK+P ++ +K I P TY++W
Sbjct: 189 EKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAIKQRGISPCGVTYSIW 248
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M++ ++ND+ G E++I+EM +D W TFSNLA+IY +AGL+EKA+ ALK +E +
Sbjct: 249 MQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKM 308
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ ++ FL++LY EVYR+W SL+ A P N+SYL M+Q + L DL G +
Sbjct: 309 NPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIK 368
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F EWES C YD+R+ N+ I Y K E AE++ + A ++ P +K ++ +
Sbjct: 369 KIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHL 428
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L N LA+ LE A+ + +W SSE + F HFE+ KDVDGAE F +IL
Sbjct: 429 LENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSN- 487
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
L E LI+TYAAA +TSP M RL +++EVSE + LL+ +C
Sbjct: 488 WKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLLKTVC 536
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 199/300 (66%), Gaps = 2/300 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKA AL EKM ELN +S+ FN+LM+L+ + G PE +P ++ EMK SI PD++TYN
Sbjct: 198 MEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYN 257
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ M++ A +NDI GAERV+EE+KR+ WTT+SNLA++YV A LFEKAE ALK+LE
Sbjct: 258 ILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEE 317
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D AY FLI+LY NLSEV R+W SL+ AFP T N+SY M+Q L NL D+ G
Sbjct: 318 EMGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDG 377
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ CF+EW+S C ++D+R+ NV + A+ +++AE + A +R + P ++F
Sbjct: 378 LKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMA 437
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
++L+ ++ A+ +E A + + +W P+ E + F+++FE+EKDV+GAE F +ILK
Sbjct: 438 HHLKVREIDTALKYMEAAASEVKNN--EWQPAPERVLAFLKYFEEEKDVEGAEKFCKILK 495
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 212/352 (60%), Gaps = 10/352 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA+A E M +LN +S+PFN+LM +Y + G EK+PA++ MK +I P TY++W
Sbjct: 155 DKAKAHFENMVDLNHVSNSLPFNNLMAMYLRIGQSEKVPALVVAMKQKNITPCDITYSMW 214
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
+++ ++ D+ G E+V++EMK +G + W TF+NLA+IY++ GL++KAE ALK LEN+
Sbjct: 215 IQSCGSLKDLDGVEKVLDEMKAEGEGISSWDTFANLAAIYIKVGLYDKAEEALKSLENKM 274
Query: 122 NAH-RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N H RD Y FLI+LY N SEVYR+W L+ PN N SYL M+Q L L D+ G
Sbjct: 275 NPHIRD--CYHFLISLYAGIANASEVYRVWDLLKKRHPNVNNSSYLTMLQALSKLNDIDG 332
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+K F EWES C TYD+R+ NV I +Y K+ E AE + A + +K ++
Sbjct: 333 IKKIFTEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMTKCKGQFSKARQLLMM 392
Query: 241 YYLRNGDMKLAVDCLEKAI-DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ L+N LA+ E A+ D + W SSE I +F HFE+ KDVDGAE F + L
Sbjct: 393 HLLKNDQADLALKHFEAAVLDLDKN----WTWSSELISSFFLHFEEAKDVDGAEEFCKTL 448
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
K LG E + L++TY +A + P M +RL+ + ++V E LL IC
Sbjct: 449 TK-WSPLGSETYTLLMKTYLSAEKACPDMKKRLEEQGIQVDEEQDCLLSKIC 499
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 209/350 (59%), Gaps = 8/350 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+A E M +LN +S+PFN+LM +Y G PEK+PA++ MK SI P TY++W+
Sbjct: 158 KAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWI 217
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++ ++ D+ G E+V++EMK +G W TF+NLA+IY++ GL+ KAE ALK LEN N
Sbjct: 218 QSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLEN-NM 276
Query: 124 HRDL-SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ D+ Y FLI LY N SEVYR+W L+ +PN N SYL M++ L L D+ G +
Sbjct: 277 NPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVK 336
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F EWES C TYD+R+ NV I +Y K+ E AE + A ++ +K ++ +
Sbjct: 337 KVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHL 396
Query: 243 LRNGDMKLAVDCLEKAI-DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
L+N LA+ E A+ D + W SSE I +F HFE+ KDVDGAE F + L K
Sbjct: 397 LKNDQADLALKHFEAAVLDQDKN----WTWSSELISSFFLHFEEAKDVDGAEEFCKTLTK 452
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
L E + L++TY AAG+ P M +RL+ + + V E + LL IC
Sbjct: 453 -WSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLLSKIC 501
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 209/350 (59%), Gaps = 8/350 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+A E M +LN +S+PFN+LM +Y G PEK+PA++ MK SI P TY++W+
Sbjct: 157 KAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWI 216
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++ ++ D+ G E+V++EMK +G W TF+NLA+IY++ GL+ KAE ALK LEN N
Sbjct: 217 QSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLEN-NM 275
Query: 124 HRDL-SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ D+ Y FLI LY N SEVYR+W L+ +PN N SYL M++ L L D+ G +
Sbjct: 276 NPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVK 335
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F EWES C TYD+R+ NV I +Y K+ E AE + A ++ +K ++ +
Sbjct: 336 KVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHL 395
Query: 243 LRNGDMKLAVDCLEKAI-DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
L+N LA+ E A+ D + W SSE I +F HFE+ KDVDGAE F + L K
Sbjct: 396 LKNDQADLALKHFEAAVLDQDKN----WTWSSELISSFFLHFEEAKDVDGAEEFCKTLTK 451
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
L E + L++TY AAG+ P M +RL+ + + V E + LL IC
Sbjct: 452 -WSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLLSKIC 500
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/358 (39%), Positives = 220/358 (61%), Gaps = 7/358 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+EKA L +KM +L +S+PFN+LM++Y + G EK+P ++ +MK ++ P ++TYN+
Sbjct: 160 SEKALQLFQKMDKLKFFRNSLPFNNLMSMYMRLGQQEKVPELVSQMKQMNLPPCTFTYNI 219
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAAD--WTTFSNLASIYVEAGLFEKAERALKELE 119
W+++L + D G ++V+EEM+ D + WTT+SNLA++Y AG FE+A+ ALK +E
Sbjct: 220 WIQSLGHMRDFEGIKKVLEEMRNDVNFGNNFNWTTYSNLAAVYTSAGEFERAKLALKMME 279
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R D +AY FL+TLYG +L EV+R+W L+ F N SYL M+Q L LKD+
Sbjct: 280 ERIDSHDRNAYHFLLTLYGGIADLEEVHRVWGCLKAKFNQVTNASYLVMLQALARLKDVE 339
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G K F+EWES C +YD+RV NV I Y ++G AE + + A R P KT E+
Sbjct: 340 GISKVFEEWESVCTSYDMRVANVAIRVYLEKGMYNEAEAVFDGAMERTPGPYFKTREMLM 399
Query: 240 DYYLRNGDMKLAVDCLEKAI-DTGRGDGG---KWVPSSETIRTFMRHFEQEKDVDGAEGF 295
L+ ++ A+ ++ A + G+ + G +W PS+E + F +FE+EKDV+GAE
Sbjct: 400 VSLLKRRQLEPALKQMKAAFTEVGQNEKGHEKEWRPSAEIVNAFFGYFEEEKDVEGAEKM 459
Query: 296 LEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
+IL K ++ V+ L++TY AAG+++ M RL + VEV E ++LL+ +C E
Sbjct: 460 WKIL-KCINRCDSTVYRLLMKTYIAAGKSAVDMRTRLAEDAVEVDEEIQRLLDVVCPE 516
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 207/350 (59%), Gaps = 7/350 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK+EA++E++K+L ++ P+ +MTLY T EK+P +IQEMK I D + YN+W
Sbjct: 210 EKSEAIMEELKDLGFIKTAFPYTEMMTLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIW 269
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
MR+ AA++D+ V E++RD + DW+ +S LA+IY+ A + +KA ALKE+EN+
Sbjct: 270 MRSYAALSDMDQVAEVFNEIERDDNINTDWSIYSTLANIYINAKVLDKAGSALKEMENKM 329
Query: 122 ---NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+D AY LI+L+G+ GN EVYRIW+S LAFP N SY+ ++ LV + D+
Sbjct: 330 KEIETKKDQLAYNHLISLHGRLGNKDEVYRIWQSFELAFPKMTNRSYVCLLSSLVGMGDI 389
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
GAE K+WES D R+ ++ AY ++G L+ AE L ER +G PNAKTWE
Sbjct: 390 EGAEVFIKKWESMKTFDDSRIYYALLNAYIEKGWLQKAELLLERVVDKGGKPNAKTWETL 449
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
++ Y++N + A++ +++++ W P S + ++HFE++ DV AE F +I
Sbjct: 450 AEGYIQNEQIHKAMEAMKRSLSI--EGNSPWQPKSVNVLALLKHFEKQGDVKSAEEFFKI 507
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE 348
L + V + E++ L+RTY G+ P + + + V E + LL+
Sbjct: 508 L-RGVKFVSTEIYNSLLRTYVYVGKVPPRISELMLEDNVSPDEETDNLLK 556
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 211/347 (60%), Gaps = 6/347 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L KM +L + S++PFN+LM+LY K G +K+ + +EMKA ++ PD+ T V
Sbjct: 197 EKATDLFHKMDDLGIASSTLPFNNLMSLYMKLGQHKKVAGLFEEMKAKNVKPDNLTCCVL 256
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M + AA+N I E V++EM+ + A W+ +S LASIYV AGL EKAE ALK+LE
Sbjct: 257 MTSYAALNKIDAVEEVLKEME-EKNAALGWSAYSTLASIYVSAGLVEKAESALKKLEGLV 315
Query: 123 AHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
RD + FL++LY GNLSEV R+W ++ FP N SY +M+Q L L D
Sbjct: 316 QPRDGRQPFDFLMSLYASVGNLSEVNRVWDVVKATFPKVTNTSYFSMLQALYKLNDADRI 375
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ F+EWES YD+++TN+M A+ K G + AE L E+A+ +GAD ++KT E+F D+
Sbjct: 376 KQIFEEWESNHECYDVKLTNIMTRAHLKNGLTKEAELLWEKAKAKGADFDSKTCELFLDH 435
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+ DMK A+ +E + G E I+ F ++FE++KDV GAE L +
Sbjct: 436 YMGTEDMKSALHWVENVTKLPKKAGK---LDQEKIQKFSKYFEEQKDVQGAEKLCSCL-R 491
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE 348
+ + +V+E L+RTY AAG T+ + +++K +K+E+ KLL+
Sbjct: 492 TLGCIDGKVYESLLRTYLAAGETNHSLRQQIKDDKIEICYDIGKLLK 538
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 216/354 (61%), Gaps = 16/354 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L KM EL + S++P N+LM+LY K G +K+ ++ +EMK ++ PD+ T +
Sbjct: 203 EKATDLYRKMDELGISSSTLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCIL 262
Query: 63 MRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M +LAA+N I E+V++EM+ +DG + W+ +S LASIY AGL EKAE ALK+LE
Sbjct: 263 MTSLAALNKIDDVEQVLKEMEEKDGVLG--WSAYSTLASIYQSAGLVEKAESALKKLEGL 320
Query: 122 NAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RD + FL++LY GNLSEV R+W ++ FP N SY +M+Q L+ L D
Sbjct: 321 VQDRDGRQPFDFLMSLYASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADY 380
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ F+EWES YD ++TNVM A+ K G + AE L E+A+ +GA ++KT E+F D
Sbjct: 381 MKQVFEEWESNHEFYDAKLTNVMTRAHLKNGMAKEAELLWEKAKEKGACFDSKTCELFLD 440
Query: 241 YYLRNGDMKLAVDCLEKAI----DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+Y+ GDMK A++ +E T + D K I F ++FE++KDV GAE F
Sbjct: 441 HYMVAGDMKSALNWVENVTKLPKKTAKLDQDK-------IPKFSKYFEEQKDVQGAERFC 493
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
L +A+ + + +E L+RTY AAG TS + +++K +K+E+ KLL+ +
Sbjct: 494 RCL-RALGCIDGKAYESLLRTYLAAGETSRSLRQQIKDDKIEICYDIGKLLKRL 546
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 193/326 (59%), Gaps = 10/326 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + + M EL +++ FN++MTL+ K G P+K+P +++ MK +I +TY+
Sbjct: 143 MKDKALSHFDTMDELGY-VTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYH 201
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+WM + A+ ND+ GAERV EEMK + W T+SNLASIYV+ FEKAE LK LE
Sbjct: 202 IWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEE 261
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + AY L+ LY TGNL EV+R+W SL+ P T N SYL M+ L L D+ G
Sbjct: 262 QVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSPVT-NFSYLVMLSTLRRLNDMEG 320
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
KCFKEWE+ C +YD R+ +V + A+ + LE AE + E A RR P + E F
Sbjct: 321 LTKCFKEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMK 380
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
++L+ ++ AV LE A+ +GD KW PS + + F++++E+E DVDG + +ILK
Sbjct: 381 FFLKKHELDAAVRHLEAALSEVKGD--KWRPSPQVVGAFLKYYEEETDVDGVDELSKILK 438
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSP 326
D + I++ A ++SP
Sbjct: 439 ANNFD------DSWIKSCITASKSSP 458
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 135/341 (39%), Gaps = 49/341 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE +L+ ++E ++ L+ LYA TG+ ++ + +K+ S + + ++Y V
Sbjct: 250 EKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSPVTN-FSYLVM 308
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L +ND+ G + +E + V+ D S S ++ + E+AE +E R+
Sbjct: 309 LSTLRRLNDMEGLTKCFKEWEASC-VSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRS 367
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL------- 175
+ + + + L R L A + QV+
Sbjct: 368 KGPFFRVREEFMKFFLKKHELDAAVR---HLEAALSEVKGDKWRPSPQVVGAFLKYYEEE 424
Query: 176 KDLPGAEKCFK---------EWESGCAT--------------------------YDIRVT 200
D+ G ++ K W C T DI
Sbjct: 425 TDVDGVDELSKILKANNFDDSWIKSCITASKSSPEIDPGMKEDSQVYHAQETRLLDIMEK 484
Query: 201 NVMIGAYAKEGRLENAEELKERARRR-GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
+ + +Y K+ +E A + E ARRR +P E Y+L ++ AV LE A
Sbjct: 485 QLCVASYLKQNTVEEAALVFEEARRRRSKEPLFSIKEKLMSYFLEIHELDDAVRHLEVAF 544
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+GD +W PS + + F+ ++E+E +VDG + +I K
Sbjct: 545 SEVKGDD-EWRPSVQIVWDFLEYYEEEMNVDGHDELYKITK 584
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 192/326 (58%), Gaps = 10/326 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + + M EL +++ FN++MTL+ K G P+K+P +++ MK +I +TY+
Sbjct: 143 MKDKALSHFDTMDELGY-VTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYH 201
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+WM + A+ ND+ GAERV EEMK + W T+SNLASIYV+ FEKAE LK LE
Sbjct: 202 IWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEE 261
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + AY L+ LY TGNL EV+R+W SL+ P T N SYL M+ L L D+ G
Sbjct: 262 QVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSPVT-NFSYLVMLSTLRRLNDMEG 320
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
KCFKEWE+ C +YD R+ +V + A+ + LE AE + E A RR P + E F
Sbjct: 321 LTKCFKEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVFEEASRRSKGPFFRVREEFMK 380
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
++L+ ++ AV LE A+ +GD KW PS + + F +++E+E DVDG + F +I K
Sbjct: 381 FFLKKHELDAAVRHLEAALSEVKGD--KWRPSPQVVGAFFKYYEEETDVDGVDEFSKIFK 438
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSP 326
D + I++ A ++SP
Sbjct: 439 ANNFD------DSWIKSCITASKSSP 458
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 210/355 (59%), Gaps = 10/355 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KAEAL+ KM E +L + +P+N +++LY G EK+P IIQE+K ++ PD T+N
Sbjct: 161 LVDKAEALMLKMSECDLLINPLPYNHMISLYISNGKLEKVPKIIQELKMNT-SPDIVTFN 219
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ A A+ ND+ AERV+ E+K+ ++ DW T+S L ++Y++ EKA +KE+EN
Sbjct: 220 LWLAACASQNDVETAERVLLELKK-AKIDPDWVTYSTLTNLYIKNASLEKAGATVKEMEN 278
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R + + AY L++L+ GN +V RIW ++ +F + Y+ MI L+ L D G
Sbjct: 279 RTSRKTRVAYSSLLSLHTNMGNKDDVNRIWEKMKASFRKMNDNEYICMISSLLKLGDFAG 338
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EWES T D+RV+N+++G+Y + ++E AE+ + ++G P TWE+F+
Sbjct: 339 AEDLYREWESVSGTNDVRVSNILLGSYINQDQMEMAEDFCNQIVQKGVIPCYTTWELFTW 398
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL+ D++ +D KAI + KW P ++ + E++ GAE L IL+
Sbjct: 399 GYLKRKDVEKFLDYFSKAISS----VTKWSPDQRLVQEAFKIIEEQAHTKGAEQLLVILR 454
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE---AICV 352
A + ++ ++TYA AG+ ++ R++ + V++ E +++LL+ +CV
Sbjct: 455 NA-GHVNTNIYNLFLKTYATAGKMPMIVAERMRKDNVKLDEETRRLLDLTSKMCV 508
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 39/193 (20%)
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
Y V + + V ++ AE+ E++ R T S L YV+ L +KAE + ++
Sbjct: 116 YAVHLDLITKVRGLNSAEKFFEDLPDRMRGKQ---TCSALLHAYVQNNLVDKAEALMLKM 172
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ + Y +I+LY G L +V +I + L++ NT+
Sbjct: 173 SECDLLINPLPYNHMISLYISNGKLEKVPKIIQELKM---NTSP---------------- 213
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
DI N+ + A A + +E AE + ++ DP+ T+
Sbjct: 214 -----------------DIVTFNLWLAACASQNDVETAERVLLELKKAKIDPDWVTYSTL 256
Query: 239 SDYYLRNGDMKLA 251
++ Y++N ++ A
Sbjct: 257 TNLYIKNASLEKA 269
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 204/351 (58%), Gaps = 12/351 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K L EKMK +N+ S++ +N+LM LY KT PEKIP ++M+ + + DS+TY +
Sbjct: 202 DKGLELFEKMKAMNITPSTLVYNNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYYML 261
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ VND+ AE+ +EE+++ V W+ ++ LA+ Y + F+KA ALK+ E
Sbjct: 262 TQSYIMVNDLKSAEKFVEELEKSTPVP--WSLYTVLANNYNKLAQFDKAVLALKKAEEVM 319
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++SA+ L++LY +GN SEV R+W SL+ AF N SYL M+ L L D +
Sbjct: 320 DRSEISAWHNLLSLYASSGNSSEVKRVWESLKSAFTKCINRSYLVMLSALKKLDDFDSLQ 379
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+EWES YD+R+TNVMI AY + + AE L++ A +G N T+ IF Y
Sbjct: 380 QLFQEWESTHERYDMRITNVMIEAYLAKDMTDEAEALRQTAMAKGHS-NVTTFYIFVVSY 438
Query: 243 LRNGDMKLAVDCL---EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
L A+D EK + T WVP E + F++HFE+ KDVDG E F E L
Sbjct: 439 LEKSRTSEALDIWRDAEKMVKT-----PNWVPPKELVTRFLKHFEEAKDVDGMEAFWEHL 493
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
KK + L E + LIRTYAAAGRT+ + RR++ ++VE+ ++LL +
Sbjct: 494 KK-LGCLDAEAYGALIRTYAAAGRTNTSISRRIEEDRVEIGPDMEELLRGV 543
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 205/352 (58%), Gaps = 8/352 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKA L +M EL ++P N+LM+LY K K+ ++ +EMK +I PDS T
Sbjct: 181 MEEKATYLYRQMDELGFWSGTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCC 240
Query: 61 VWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ M + AA N I E +++EM ++D V+ W+ +S LASIYV AG EKAE ALK+LE
Sbjct: 241 ILMTSYAASNKIDAIEELLKEMVEKD--VSLGWSAYSTLASIYVNAGQVEKAESALKKLE 298
Query: 120 NRNAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
D + FL++LY GNLSE+ R+W ++ F NISYL M+ L L D+
Sbjct: 299 GLIGAEDGRQPFDFLMSLYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDI 358
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ + EWES TYD+R+TN+MI + + G E AE L+E+A+ +G + ++KT E+F
Sbjct: 359 DRMKQIYMEWESNYQTYDVRLTNMMIRGHLRLGMSEEAETLREKAKEKGVEFDSKTCELF 418
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
D+Y+ GDM A++ +E + G + I F ++FE+ KD D AE F
Sbjct: 419 LDHYMGKGDMNSALNWVENMTKLPKKAGK---LDQDRIYKFQKYFEEHKDADSAERFCNC 475
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
L + + + + +E L+RTY AAG+ S + +++K +K+E+ KLL+ +
Sbjct: 476 L-RMLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKIEICYDIGKLLKRL 526
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 210/351 (59%), Gaps = 6/351 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + KM EL + S++P N+LM+LY K G K+ ++ +EMK ++ PD+ T
Sbjct: 172 MEDKATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCC 231
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ M + AA+N I V++EM+ + +VA W+ +S LAS+YV A + E+AE ALK+LE+
Sbjct: 232 LLMSSYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLES 290
Query: 121 R-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + FL++LY GNLSEV R+W ++ F N SYL M+Q L L D
Sbjct: 291 LIDVQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDD 350
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
++ +++WES YD R+TN+M A+ + G + AE L E+ + +GA+ ++KT E+F
Sbjct: 351 RMKQIYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFL 410
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
++Y+ GDM A++ +E R K E I F+++FE+ KDV+GAE FL L
Sbjct: 411 EHYMGKGDMTSALNWVENMTKLPR---KKSKLDQEKISCFLKYFEEHKDVEGAERFLNCL 467
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
+ + + + +E L+RTY AAG+TS + + +K +K+E+ KLL+ I
Sbjct: 468 RTS-GCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKIEICYGIGKLLKRI 517
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 210/351 (59%), Gaps = 6/351 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + KM EL + S++P N+LM+LY K G K+ ++ +EMK ++ PD+ T
Sbjct: 172 MEDKATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCC 231
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ M + AA+N I V++EM+ + +VA W+ +S LAS+YV A + E+AE ALK+LE+
Sbjct: 232 LLMSSYAALNKIDTVGEVLKEME-EKKVALGWSAYSTLASLYVNANMVEEAESALKKLES 290
Query: 121 R-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + FL++LY GNLSEV R+W ++ F N SYL M+Q L L D
Sbjct: 291 LIDVQAGRQPFDFLMSLYASVGNLSEVNRVWNLIKANFQKVTNTSYLGMLQALYKLNDDD 350
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
++ +++WES YD R+TN+M A+ + G + AE L E+ + +GA+ ++KT E+F
Sbjct: 351 RMKQIYEDWESNYENYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFL 410
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
++Y+ GDM A++ +E R K E I F+++FE+ KDV+GAE FL L
Sbjct: 411 EHYMGKGDMTSALNWVENMTKLPR---KKSKLDQEKISCFLKYFEEHKDVEGAERFLNCL 467
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
+ + + + +E L+RTY AAG+TS + + +K +K+E+ KLL+ I
Sbjct: 468 RTS-GCIDGKAYESLLRTYLAAGKTSRSIRQMIKEDKIEICYGIGKLLKRI 517
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 206/352 (58%), Gaps = 8/352 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKA L +M EL + S++P N+LM+LY K K+ ++ +EMK ++ P+S T
Sbjct: 165 MEEKATNLYRQMDELGIWSSTLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCC 224
Query: 61 VWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ M + AA+N I E +++EM ++D V W+ +S LASIYV AG F KAE ALK+LE
Sbjct: 225 ILMTSYAALNKIDDIEELLKEMVEKD--VTLGWSAYSTLASIYVNAGQFGKAESALKKLE 282
Query: 120 NR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+AH D + FL++LY GNLSEV R+W ++ F N SYL M+ L L D+
Sbjct: 283 GLISAHDDRQPFDFLLSLYASLGNLSEVNRVWNVIKSKFSKVTNTSYLGMLHALYKLNDI 342
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ + EWES T+D+++TN+MI ++ K G E AE L E+ + GA+ + KT E+F
Sbjct: 343 DRMKQIYMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKENGAEFDTKTCELF 402
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
D+Y+ DM A++ LE + + I F ++FE+ KD DGAE F
Sbjct: 403 LDHYMGTEDMNSALNWLENMTKLSKKAEK---LDQDRIYKFQKYFEEHKDADGAERFCNC 459
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
L + + + + +E L+RTY AAG+ S + +++K +KVE+ KLL+ +
Sbjct: 460 L-RTLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKVEICYDIGKLLKRL 510
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 205/355 (57%), Gaps = 10/355 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++EKAEAL+EKM E +P+N +++LY G EK+P +IQE+K ++ PD TYN
Sbjct: 172 VSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNT-SPDVVTYN 230
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ A+ ND+ AE+V+ E+K+ ++ DW T+S+L ++Y++ GL +KA L E+E
Sbjct: 231 LWLTVCASQNDVETAEKVLLEIKK-AKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEK 289
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R + + AY LI+L+ + V+RIW+ L+ F + Y MI LV L +
Sbjct: 290 RTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEE 349
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE + EW S T D RV N+++ AY + +E AE+ + RG P+ TWE+ +
Sbjct: 350 AENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTW 409
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL+ M+ +D EKA+ G KW P + +R ++ E++ +++GAE L IL+
Sbjct: 410 GYLKKKQMEKVLDYFEKAV----GSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILR 465
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE---AICV 352
KA + E++ L+R YA AG+ ++ +K +KVE+ E + +L++ +CV
Sbjct: 466 KA-GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMCV 519
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 59 YNVWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y V + +A + ++ AE+ E++ K G+ T + L YV+ + EKAE ++
Sbjct: 127 YAVHLDLIAKIRGLASAEKFFEDLSDKMKGQ-----PTCTALLHTYVQNKVSEKAEALME 181
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN--ISYLNMIQVLVN 174
++ + Y +I+LY G L +V + + L+ NT+ ++Y + V +
Sbjct: 182 KMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK---KNTSPDVVTYNLWLTVCAS 238
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA----EELKERARRRG 227
D+ AEK E + D + + Y K+G L+ A E+++R R+G
Sbjct: 239 QNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKG 295
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 205/355 (57%), Gaps = 10/355 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++EKAEAL+EKM E +P+N +++LY G EK+P +IQE+K ++ PD TYN
Sbjct: 285 VSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNT-SPDVVTYN 343
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ A+ ND+ AE+V+ E+K+ ++ DW T+S+L ++Y++ GL +KA L E+E
Sbjct: 344 LWLTVCASQNDVETAEKVLLEIKK-AKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEK 402
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R + + AY LI+L+ + V+RIW+ L+ F + Y MI LV L +
Sbjct: 403 RTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEE 462
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE + EW S T D RV N+++ AY + +E AE+ + RG P+ TWE+ +
Sbjct: 463 AENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTW 522
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL+ M+ +D EKA+ G KW P + +R ++ E++ +++GAE L IL+
Sbjct: 523 GYLKKKQMEKVLDYFEKAV----GSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILR 578
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE---AICV 352
KA + E++ L+R YA AG+ ++ +K +KVE+ E + +L++ +CV
Sbjct: 579 KA-GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMCV 632
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 59 YNVWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y V + +A + ++ AE+ E++ K G+ T + L YV+ + EKAE ++
Sbjct: 240 YAVHLDLIAKIRGLASAEKFFEDLSDKMKGQ-----PTCTALLHTYVQNKVSEKAEALME 294
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN--ISYLNMIQVLVN 174
++ + Y +I+LY G L +V + + L+ NT+ ++Y + V +
Sbjct: 295 KMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK---KNTSPDVVTYNLWLTVCAS 351
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA----EELKERARRRG 227
D+ AEK E + D + + Y K+G L+ A E+++R R+G
Sbjct: 352 QNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKG 408
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 202/348 (58%), Gaps = 7/348 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++EKAEAL+EKM E +P+N +++LY G EK+P +IQE+K ++ PD TYN
Sbjct: 172 VSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKNT-SPDVVTYN 230
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ A+ ND+ AE+V+ E+K+ ++ DW T+S+L ++Y++ GL +KA L E+E
Sbjct: 231 LWLTVCASQNDVETAEKVLLEIKK-AKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEK 289
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R + + AY LI+L+ + V+RIW+ L+ F + Y MI LV L +
Sbjct: 290 RTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEE 349
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE + EW S T D RV N+++ AY + +E AE+ + RG P+ TWE+ +
Sbjct: 350 AENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTW 409
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL+ M+ +D EKA+ G KW P + +R ++ E++ +++GAE L IL+
Sbjct: 410 GYLKKKQMEKVLDYFEKAV----GSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVLVILR 465
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE 348
KA + E++ L+R YA AG+ ++ +K +KVE+ E + +L++
Sbjct: 466 KA-GHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIK 512
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 96 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 155
++L +Y ++G A R + RD+ + LI+ Y G+ +E ++ + L
Sbjct: 808 NSLIDMYGKSGNLTIARRIFCRIP-----RDIVTWNTLISSYAHCGHFAEALSLYDKMVL 862
Query: 156 --AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
PN+A + + ++ +L L EK G +++ + +I YAK G+L
Sbjct: 863 EDLKPNSATL--VXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQL 920
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
E + E+ R + TW + Y +GD + A++ ++
Sbjct: 921 EKSREIFNSMHER----DVITWNVMISGYGMHGDARSAIEXFQQ 960
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/267 (17%), Positives = 111/267 (41%), Gaps = 10/267 (3%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +N+L++ YA GH + ++ +M + P+S T + A + + + E+V
Sbjct: 835 VTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKV-HN 893
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
G+ + + + L +Y + G EK+ +E+ N RD+ + +I+ YG G
Sbjct: 894 YINGGKFEFNLSIATALIDMYAKCGQLEKS----REIFNSMHERDVITWNVMISGYGMHG 949
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+ ++ + + +++L ++ + + + F + + +++
Sbjct: 950 DARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYA 1009
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSDYYLRNGDMKLAVDCLEKAID 260
M+ + G L+ AE L P+ W + S + N ++++ + + AI
Sbjct: 1010 CMVDLLGRSGNLQEAEAL---VLSMPISPDGGVWGALLSSCKIHN-EIEMGIRIAKHAIX 1065
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEK 287
+ + G +V S + + E EK
Sbjct: 1066 SDVENDGYYVMISNMYSSIGKWEEAEK 1092
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
E NL ++ +L+ +YAK G EK I M ++ T+NV + D
Sbjct: 901 EFNLSIAT----ALIDMYAKCGQLEKSREIFNSMHERDVI----TWNVMISGYGMHGDAR 952
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
A ++M+ + + TF + S AGL ++ + ++++ + +L Y +
Sbjct: 953 SAIEXFQQME-ESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACM 1011
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFP 158
+ L G++GNL E +L L+ P
Sbjct: 1012 VDLLGRSGNLQEA----EALVLSMP 1032
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 59 YNVWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y V + +A + ++ AE+ E++ K G+ T + L YV+ + EKAE ++
Sbjct: 127 YAVHLDLIAKIRGLASAEKFFEDLSDKMKGQ-----PTCTALLHTYVQNKVSEKAEALME 181
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN--ISYLNMIQVLVN 174
++ + Y +I+LY G L +V + + L+ NT+ ++Y + V +
Sbjct: 182 KMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELK---KNTSPDVVTYNLWLTVCAS 238
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA----EELKERARRRG 227
D+ AEK E + D + + Y K+G L+ A E+++R R+G
Sbjct: 239 QNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKG 295
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 204/353 (57%), Gaps = 7/353 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK L E MK +N+ + +N+LM LY KT PEKIP + +M+ S I P+ ++Y
Sbjct: 155 MAEKGLELYENMKAMNIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYF 214
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + +NDI AE+V++E++ V W+ ++ LA+ Y + F+KAE LK+ E
Sbjct: 215 VLTESYIMMNDIESAEKVLKELQEVNSVP--WSLYATLANGYNKLQQFDKAEFTLKKAEE 272
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ ++ L++ Y +GNLSEV RIW SL+ AF N SYL M++ L L D
Sbjct: 273 VLDKHDVFSWHCLLSHYANSGNLSEVKRIWESLKSAFKKCTNRSYLVMLKALKKLDDFDT 332
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ F+EWES YD+++ N++I AY +G ++ AE +++ + N +T+ IF++
Sbjct: 333 LQQIFQEWESSHEHYDMKIPNIIIQAYLDKGMVDKAEAMRQTTMAQDHS-NYRTFCIFAE 391
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+YL M A+ + A +G WVP + + +++HFE KDVDG E F E LK
Sbjct: 392 FYLEKSKMNEALQVWKDAKKMVKGQD--WVP-EKLVNRYLKHFEDSKDVDGMETFCECLK 448
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
+ L E +E LIRTY + GRT+P + +R+++++V++ + L+AI E
Sbjct: 449 N-LGRLDAEAYEALIRTYISVGRTNPSIPQRMEVDRVDIRPEMFESLKAISTE 500
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 181/324 (55%), Gaps = 7/324 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E E+M++ ++P N LM Y +G P ++ AII EMK ++ D TYN
Sbjct: 196 MKEKTEDTFEQMRKKGFASDTLPCNVLMNFYVDSGEPNEVLAIIDEMKERNVSFDVCTYN 255
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+++ AA D ERV +M D V A+WTT++ LAS+Y++ G EKAE LK+ E
Sbjct: 256 IWIKSCAAKQDAEEMERVFSQMIADESVVANWTTYTTLASMYIKLGNSEKAEECLKDAEK 315
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R R+ + +L+TLY G EVYRIW + FP N+ Y ++ LV + D+ G
Sbjct: 316 RTTGREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALVRIGDIEG 375
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S +++D + N+++ YAKEG + AE+ R +G +P TWEI +
Sbjct: 376 AELLYEEWASKSSSFDPKTMNILLAWYAKEGLITKAEQTLNRFVEKGGNPKPNTWEILAT 435
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL- 299
Y+++ + A+ C+EKA T KW P + + + F+++ D +GA+ + +L
Sbjct: 436 AYMKDDKISEALSCMEKA--TAIKSANKWKPRPTNVESLLASFKEKNDAEGADRLVSVLT 493
Query: 300 -KKAVDDLGVEVFEPLIRTYAAAG 322
+ +D E ++ LI TYA AG
Sbjct: 494 SRGCAED---EEYKSLINTYAFAG 514
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 179/324 (55%), Gaps = 7/324 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E E+M++ ++PFN LM Y P+K+ A+ EMK ++ D TYN
Sbjct: 194 MKEKTEDTFEQMRKKGYASDTLPFNVLMNFYVDVEEPQKVSAVTDEMKERNVSFDVCTYN 253
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+++ AA+ D G +RV +M D V A+WTT++ LAS++++ G FEKAE LKE E
Sbjct: 254 IWIKSFAAMKDADGMDRVFNQMIADESVVANWTTYTTLASMHIKLGNFEKAEVCLKEAEK 313
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R RD + FLITLY EVYRIW + F N+ Y ++ LV L D+ G
Sbjct: 314 RTTGRDKKCFHFLITLYSYLQKKEEVYRIWNWYKATFSTIHNLGYQEVLSALVRLGDIEG 373
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S +++D + N+++ Y++EG + AE+ R +G +P TWEI +
Sbjct: 374 AELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAEQTLNRFVEKGGNPKPNTWEILAS 433
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL- 299
YL++ + A+ C+EKA +W P + + + +F++ D D A+ + +L
Sbjct: 434 AYLKDNQLSEALSCMEKA--AAVKSASRWRPRPSNVESLLAYFKENNDTDSADRLMGVLT 491
Query: 300 -KKAVDDLGVEVFEPLIRTYAAAG 322
+ ++ E ++ LI TYA AG
Sbjct: 492 SRGCAEN---EEYKSLINTYALAG 512
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 175/324 (54%), Gaps = 9/324 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E E+M++ ++PFN LM Y PEK+ + EMK +I D TYN
Sbjct: 184 MKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYN 243
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W++ AA+ D ERV+ +M D V A+WTT++ LAS++++ FEKAE LKE E
Sbjct: 244 IWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEK 303
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R RD + FLITLY EVYRIW + F N+ Y ++ LV L D+ G
Sbjct: 304 RATGRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEG 363
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S +++D + N+++ Y++EG + A++ R +G +P TWEI +
Sbjct: 364 AELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWEILAT 423
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL++ + A+ CLEKA T KW P + T + +F+++ D + + + +L+
Sbjct: 424 AYLKDNQLSEALSCLEKA--TAVKSASKWRPRPTNVETLLAYFKEKNDTESVDRLMSVLR 481
Query: 301 KAVDDLGV---EVFEPLIRTYAAA 321
G E ++ LI TYA A
Sbjct: 482 SR----GCAENEEYKSLIDTYALA 501
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 175/324 (54%), Gaps = 9/324 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E E+M++ ++PFN LM Y PEK+ + EMK +I D TYN
Sbjct: 184 MKEKTEYTFEQMRKKGFATDTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYN 243
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W++ AA+ D ERV+ +M D V A+WTT++ LAS++++ FEKAE LKE E
Sbjct: 244 IWIKCCAAMKDADAMERVLNQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEK 303
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R RD + FLITLY EVYRIW + F N+ Y ++ LV L D+ G
Sbjct: 304 RATGRDKKCFHFLITLYSHLQKKEEVYRIWNWYKATFKTIHNLGYQEVLSALVRLGDIEG 363
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S +++D + N+++ Y++EG + A++ R +G +P TWEI +
Sbjct: 364 AELLYEEWASKSSSFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWEILAT 423
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL++ + A+ CLEKA T KW P + T + +F+++ D + + + +L+
Sbjct: 424 AYLKDNQLSEALSCLEKA--TAVKSASKWRPRPTNVETLLAYFKEKNDTESVDRLMSVLR 481
Query: 301 KAVDDLGV---EVFEPLIRTYAAA 321
G E ++ LI TYA A
Sbjct: 482 SR----GCAENEEYKSLIDTYALA 501
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 180/324 (55%), Gaps = 7/324 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E E+M++ ++P N LM Y +G P+++ AII EMK ++ D TYN
Sbjct: 194 MKEKTEETFEQMRKKGFASDTLPCNVLMNFYVDSGEPDEVLAIIDEMKERNVSFDVCTYN 253
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+++ AA D E+V +M D V A+WTT++ LAS+Y++ G EKAE LK+ E
Sbjct: 254 IWIKSCAAKQDAEEMEQVFSQMIADESVVANWTTYTTLASMYLKLGNSEKAEECLKDAEK 313
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R R+ + +L+TLY G EVYRIW + FP N+ Y ++ L+ + D+ G
Sbjct: 314 RTTGREKKCFHYLMTLYSHLGKKEEVYRIWNWYKATFPMIHNLGYQELLSALIRIGDIEG 373
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S ++D + N+++ YAKEG + AE+ R +G +P TWEI +
Sbjct: 374 AELLYEEWASKSYSFDPKTMNILLAWYAKEGLITKAEQTVNRFVEKGGNPKPNTWEILAT 433
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL- 299
Y+ + + A+ C+EKA T KW P + T + F+++ D +GA+ + +L
Sbjct: 434 AYMNDDKISEALSCMEKA--TAVKSASKWKPRPTNVETLLASFKEKNDAEGADRLVSVLT 491
Query: 300 -KKAVDDLGVEVFEPLIRTYAAAG 322
+ +D E ++ LI TYA AG
Sbjct: 492 SRGCAED---EEYKSLIDTYAFAG 512
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 178/319 (55%), Gaps = 3/319 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E+ E+M++ ++PFN LM Y EK+ +I EM ++ D TYN
Sbjct: 192 MKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYN 251
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+++ AA+ D E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E
Sbjct: 252 IWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEK 311
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R R+ + +L+TLY G EVYR+W + FP N+ Y ++ LV L D+ G
Sbjct: 312 RTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEG 371
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S +++D + N+++ YA+EG + AE+ R +G +P TWEI
Sbjct: 372 AELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGT 431
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL++G A+ CLEKA T KW P + + + +F+++ D + A+ + +L+
Sbjct: 432 AYLKDGQSSEALSCLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLR 489
Query: 301 KAVDDLGVEVFEPLIRTYA 319
+ E ++ LI TYA
Sbjct: 490 SRRCEEN-EEYKSLINTYA 507
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 178/319 (55%), Gaps = 3/319 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E+ E+M++ ++PFN LM Y EK+ +I EM ++ D TYN
Sbjct: 212 MKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYN 271
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+++ AA+ D E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E
Sbjct: 272 IWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEK 331
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R R+ + +L+TLY G EVYR+W + FP N+ Y ++ LV L D+ G
Sbjct: 332 RTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEG 391
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S +++D + N+++ YA+EG + AE+ R +G +P TWEI
Sbjct: 392 AELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGT 451
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL++G A+ CLEKA T KW P + + + +F+++ D + A+ + +L+
Sbjct: 452 AYLKDGQSSEALSCLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLR 509
Query: 301 KAVDDLGVEVFEPLIRTYA 319
+ E ++ LI TYA
Sbjct: 510 SRRCEEN-EEYKSLINTYA 527
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 177/318 (55%), Gaps = 3/318 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E+ E+M++ ++PFN LM Y EK+ +I EM ++ D TYN
Sbjct: 192 MKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYN 251
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+++ AA+ D E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E
Sbjct: 252 IWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEK 311
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R R+ + +L+TLY G EVYR+W + FP N+ Y ++ LV L D+ G
Sbjct: 312 RTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEG 371
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S +++D + N+++ YA+EG + AE+ R +G +P TWEI
Sbjct: 372 AELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGT 431
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL++G A+ CLEKA T KW P + + + +F+++ D + A+ + +L+
Sbjct: 432 AYLKDGQSSEALSCLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLR 489
Query: 301 KAVDDLGVEVFEPLIRTY 318
+ E ++ LI TY
Sbjct: 490 SRRCEEN-EEYKSLINTY 506
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 169/300 (56%), Gaps = 2/300 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E+ E+M++ ++PFN LM Y EK+ +I EM ++ D TYN
Sbjct: 192 MKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYN 251
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+++ AA+ D E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E
Sbjct: 252 IWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEK 311
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R R+ + +L+TLY G EVYR+W + FP N+ Y ++ LV L D+ G
Sbjct: 312 RTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEG 371
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S +++D + N+++ YA+EG + AE+ R +G +P TWEI
Sbjct: 372 AELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGT 431
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL++G A+ CLEKA T KW P + + + +F+++ D + A+ + +L+
Sbjct: 432 AYLKDGQSSEALSCLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLR 489
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 200/352 (56%), Gaps = 10/352 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEAL+EKM E +++P+N ++++Y G EK+ IIQE+K + PD TYN+W+
Sbjct: 159 KAEALMEKMSECGFLKNALPYNHMLSVYVANGQLEKVAEIIQELKKKT-SPDVVTYNMWL 217
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A A+ ND+ AE+V E+K+ ++ DW T+S L ++Y++ EKA LKE+E R +
Sbjct: 218 TACASQNDVETAEKVFMELKK-SKLDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKRAS 276
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ Y L++L+ + ++R W ++ F + Y MI LV L + GAE
Sbjct: 277 KKNRVTYSSLLSLHANMKDKDGLHRTWNKMKSVFNKMNDAEYNCMISSLVKLGEFGGAEN 336
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ EWES AT D RV+N+++ +Y ++E+AE +R ++G P TWE+ + +L
Sbjct: 337 LYNEWESVSATRDSRVSNIVLASYINRNQMEDAENFCQRMVQKGITPCYTTWELLTCGHL 396
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ M+ ++ +KA+ + R KW P I ++ E+ D++GAE L IL+ A
Sbjct: 397 KTEQMEKVLENFKKALCSVR----KWTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDA- 451
Query: 304 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE---AICV 352
+ ++ L+RTYA AG+ ++ R++ + VE+ + + KL++ +CV
Sbjct: 452 GHVSTMIYNSLLRTYAKAGKMPVIIEERMQKDNVELDDETHKLIQTTSTMCV 503
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 6/178 (3%)
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
Y V + +A + ++ AE+ E++ R D+ S L +YV+ KAE ++++
Sbjct: 111 YAVHLDLIAKIRGLNSAEKFFEDIPDKMR---DYQACSALLHVYVQNKSISKAEALMEKM 167
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKD 177
++ Y ++++Y G L +V I + L + P+ ++Y + + D
Sbjct: 168 SECGFLKNALPYNHMLSVYVANGQLEKVAEIIQELKKKTSPDV--VTYNMWLTACASQND 225
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ AEK F E + D + + Y K+ LE A + +R + N T+
Sbjct: 226 VETAEKVFMELKKSKLDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKRASKKNRVTY 283
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 179/312 (57%), Gaps = 6/312 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KAE L+EK++ + +PFN +MTLY +K+ ++I EM +I D Y+YN
Sbjct: 109 MRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYN 168
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W L++ E+V E+MK + + +WTTFS +A++Y++ G FEKAE LK++E+
Sbjct: 169 IW---LSSCESTERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVES 225
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R +RD Y +LI+LYG TGN +EVYR W + FPN N+ Y +I LV + DL G
Sbjct: 226 RITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEG 285
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK ++EW S ++YD R+ N+++G Y KEG LE AE + G PN+ TWEI ++
Sbjct: 286 AEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAE 345
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ A+ C ++A+ G G W P + F+ E+E D E + +L+
Sbjct: 346 GNTGVKKISDALSCFKRAV-LAEGSNG-WKPKPVNVSAFLDLCEEEADTATKEALMGLLR 403
Query: 301 K-AVDDLGVEVF 311
+ +D G E+
Sbjct: 404 QMGYEDDGAEML 415
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 174/301 (57%), Gaps = 5/301 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KAE L+EK++ + +PFN +MTLY +K+ ++I EM +I D Y+YN
Sbjct: 175 MRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYN 234
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W L++ E+V E+MK + + +WTTFS +A++Y++ G FEKAE LK++E+
Sbjct: 235 IW---LSSCESTERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVES 291
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R +RD Y +LI+LYG TGN +EVYR W + FPN N+ Y +I LV + DL G
Sbjct: 292 RITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEG 351
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK ++EW S ++YD R+ N+++G Y KEG LE AE + G PN+ TWEI ++
Sbjct: 352 AEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAE 411
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ A+ C ++A+ G G W P + F+ E+E D E + +L+
Sbjct: 412 GNTGVKKISDALSCFKRAV-LAEGSNG-WKPKPVNVSAFLDLCEEEADTATKEALMGLLR 469
Query: 301 K 301
+
Sbjct: 470 Q 470
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 199/353 (56%), Gaps = 9/353 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAEAL+ K+ +L L S PFN +M LY T E++P +I +MK + I + +YN+W
Sbjct: 129 EKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLW 188
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A + V+ ++ AE V ++M D V W+T S LA+IY+++GL +KA ALK E +
Sbjct: 189 MSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKL 248
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + Y FLIT+Y N EV R+W + + + +Y+ ++ LV L D+ AE
Sbjct: 249 SAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAE 308
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+EWES C YDIRV+NV++GAY + G ++ AE L RG PN KTWEI + +
Sbjct: 309 RIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGW 368
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+++ +M A++ ++K + W P+ + R+ E+ +V+ ++ K
Sbjct: 369 MKSQNMDKAINAMKKGFSMLK--HCDWRPNHGLVTAIARYLEEHGNVNDLNQYV----KV 422
Query: 303 VDDLGV---EVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICV 352
+ LGV +++ L+R + R +L+ ++ +++E+ + + L++A V
Sbjct: 423 IHQLGVAKLPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMDDETSALVQAFKV 475
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 202/359 (56%), Gaps = 14/359 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+T KAEAL+ KM E S +P+N +M+LY G EK+P + +E+K ++ PD T+N
Sbjct: 153 LTNKAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELKVNT-SPDVVTFN 211
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG----LFEKAERALK 116
+ + A A+ ND+ AERV+ ++K+ +V DW T+S L ++Y+ EKA LK
Sbjct: 212 LLLTACASENDVETAERVLLQLKK-AKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLK 270
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
E+E R + AY L++L+ GN+ EV RIW ++ F ++ Y+ MI LV L
Sbjct: 271 EMEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMISSLVKLG 330
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
D G E +KEWES T D+RV+N+++ +Y +G++E AE + +G + +WE
Sbjct: 331 DFAGVENLYKEWESVSGTNDVRVSNLLLTSYVDQGQMEMAEIFCNQLVEKGVCLSYSSWE 390
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ + YL+ D+K + KAI + + +W+P ++ +++ ++GAE L
Sbjct: 391 LLTRGYLKKKDVKKFLHYFGKAISSVK----QWIPDPRLVQEAFTVIQEQAHIEGAEQLL 446
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE---AICV 352
IL+ A + ++ ++TYAAAG+ V+ R+K + V++ + + +LL+ +CV
Sbjct: 447 VILRNA-GHVNTNIYNLFLKTYAAAGKMPLVVAERMKKDNVQLDKETHRLLDLTSKMCV 504
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 174/301 (57%), Gaps = 5/301 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KAE L+EK++ + +PFN +MTLY +K+ ++I EM +I D Y+YN
Sbjct: 384 MRDKAEILIEKLRNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYN 443
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W L++ E+V E+MK + + +WTTFS +A++Y++ G FEKAE LK++E+
Sbjct: 444 IW---LSSCESTERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVES 500
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R +RD Y +LI+LYG TGN +EVYR W + FPN N+ Y +I LV + DL G
Sbjct: 501 RITNRDRMPYHYLISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEG 560
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK ++EW S ++YD R+ N+++G Y KEG LE AE + G PN+ TWEI ++
Sbjct: 561 AEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAE 620
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ A+ C ++A+ G G W P + F+ E+E D E + +L+
Sbjct: 621 GNTGVKKISDALSCFKRAV-LAEGSNG-WKPKPVNVSAFLDLCEEEADTATKEALMGLLR 678
Query: 301 K 301
+
Sbjct: 679 Q 679
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 191/345 (55%), Gaps = 7/345 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+LE+M + ++PFN +M+LY +G EK+P +I+E++ +I PD TYN+W
Sbjct: 91 DKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIW 149
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + N + AE+V + MK D RV DW TFS L SIY+ AGL K AL E+E R
Sbjct: 150 LTYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRA 208
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ ++ +AY L+TLY + + R+WR +R F ++ Y M+ L D+ AE
Sbjct: 209 SRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAE 268
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ EWES T D R+ N ++ Y K G +E AE + ++G P+ TWE+F Y
Sbjct: 269 SFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGY 328
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L +G M ++CL+KA+ KW P+ + E++ D++ AE L + ++A
Sbjct: 329 LSDGRMDKVLECLKKALSCLE----KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREA 384
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ E++ ++RTYA A ++ R+ +KV + + ++ LL
Sbjct: 385 -GYVTTEIYNSVLRTYAKAELMPLIVDERMDQDKVSMDDETRSLL 428
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 200/347 (57%), Gaps = 7/347 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+++KAEAL EKM E S +P+N +++++ G EK+ +I+E+K + PD TYN
Sbjct: 170 LSDKAEALFEKMGECGFLKSCLPYNHMLSMFISKGQFEKVSVLIKELKMKT-SPDIVTYN 228
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ A A+ ND+ GAE+V + K + ++ DW T+S L ++Y + EKA+ ALKE+E
Sbjct: 229 LWLTAFASGNDVEGAEKVYLKAK-ESKLNPDWVTYSVLTNLYAKTDNLEKAKLALKEMEK 287
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ ++ AY LI+L+ G+ V W+ +R +F + YL+MI +V L +
Sbjct: 288 LVSKKNRVAYASLISLHANLGDKDGVNLTWKKVRSSFKKMNDAEYLSMISAVVKLGEFEQ 347
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ + EWES T D R+ N+++ Y + E+ ER +G +P+ TWEI +
Sbjct: 348 AKGLYDEWESVSGTGDARIPNLILAEYMNRDEILLGEKFYERIVEKGINPSYSTWEILTW 407
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL+ D++ +DC EKAID+ + KW + ++ + E++ +V GAE + +L+
Sbjct: 408 AYLKRKDLEKVLDCFEKAIDSVK----KWTVNVRLVKAVCKELEEQGNVKGAEKLMTLLQ 463
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
KA + +++ L+RTYA AG + ++ R+ + VE+ E +K+L+
Sbjct: 464 KA-GHVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELI 509
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 191/345 (55%), Gaps = 7/345 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+LE+M + ++PFN +M+LY +G EK+P +I+E++ +I PD TYN+W
Sbjct: 138 DKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIW 196
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + N + AE+V + MK D RV DW TFS L SIY+ AGL K AL E+E R
Sbjct: 197 LTYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRA 255
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ ++ +AY L+TLY + + R+WR +R F ++ Y M+ L D+ AE
Sbjct: 256 SRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAE 315
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ EWES T D R+ N ++ Y K G +E AE + ++G P+ TWE+F Y
Sbjct: 316 SFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGY 375
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L +G M ++CL+KA+ KW P+ + E++ D++ AE L + ++A
Sbjct: 376 LSDGRMDKVLECLKKALSCLE----KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREA 431
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ E++ ++RTYA A ++ R+ +KV + + ++ LL
Sbjct: 432 -GYVTTEIYNSVLRTYAKAELMPLIVDERMDQDKVSMDDETRSLL 475
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 191/345 (55%), Gaps = 7/345 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+LE+M + ++PFN +M+LY +G EK+P +I+E++ +I PD TYN+W
Sbjct: 161 DKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIW 219
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + N + AE+V + MK D RV DW TFS L SIY+ AGL K AL E+E R
Sbjct: 220 LTYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRA 278
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ ++ +AY L+TLY + + R+WR +R F ++ Y M+ L D+ AE
Sbjct: 279 SRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAE 338
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ EWES T D R+ N ++ Y K G +E AE + ++G P+ TWE+F Y
Sbjct: 339 SFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGY 398
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L +G M ++CL+KA+ KW P+ + E++ D++ AE L + ++A
Sbjct: 399 LSDGRMDKVLECLKKALSCLE----KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREA 454
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ E++ ++RTYA A ++ R+ +KV + + ++ LL
Sbjct: 455 -GYVTTEIYNSVLRTYAKAELMPLIVDERMDQDKVSMDDETRSLL 498
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 172/303 (56%), Gaps = 4/303 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKAE+L+++M+ + ++P+N +MTLY +K+ II EM +I D Y+YN
Sbjct: 186 MREKAESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYN 245
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ + E+V E+MK DG + +WTTFS +A++Y++ G FEKAE L+ +E+
Sbjct: 246 IWLSSCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDCLRRVES 305
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R RD Y +L++LYG GN EVYR+W + FP+ N+ Y MI LV + D+ G
Sbjct: 306 RITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVRMDDIEG 365
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK ++EW S +YD R+ N+ + A+ +G L+ AE + G PN+ +WEI +
Sbjct: 366 AEKIYEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHSWEILAQ 425
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
++ A+ CL++A T G K W P+ + +F + E+E D+ E L
Sbjct: 426 GHISERRTSEALSCLKEAFAT---PGSKSWKPNPANVSSFFKLCEEEVDMASKEALASFL 482
Query: 300 KKA 302
+++
Sbjct: 483 RQS 485
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 167/300 (55%), Gaps = 4/300 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE LLEKM+ +PFN +MTLY EK+ +++ EM +SI D Y+YN+W
Sbjct: 189 EKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIW 248
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + E V E+MK+D + A+WTTFS +A++Y++ GL EKAE L+ +E+R
Sbjct: 249 LSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRI 308
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD Y +LI+LYG GN E+YR+W + FP N+ Y +I L+ + D+ GAE
Sbjct: 309 VGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIRVGDVEGAE 368
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K ++EW + +TYD R+ N+ IG Y KEG AE + G PN+ TWEI D +
Sbjct: 369 KIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRH 428
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ G + A+ ++A +G K W P + + E+E D+ E + +L++
Sbjct: 429 TKEGRVSDALASWKEAFS---AEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLRQ 485
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE L +++ +G +P++ L++LY G+ E++ + K + Y+
Sbjct: 293 LMEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYH 352
Query: 61 VWMRALAAVNDISGAERVIEEM-----KRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 115
+ AL V D+ GAE++ EE D R+A + + YV+ G KAE
Sbjct: 353 AIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGW------YVKEGNTSKAESFF 406
Query: 116 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
+ + S ++ L+ + + G +S+ W+
Sbjct: 407 DHMVEVGGKPNSSTWEILVDRHTKEGRVSDALASWK 442
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 165/293 (56%), Gaps = 2/293 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EK E+ E+M++ ++PFN LM Y EK+ +I EM ++ D TYN
Sbjct: 192 MKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMERNVAFDVCTYN 251
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+++ AA+ D E+V +M RD V A+WTT++ LAS++++ G EKAE +LKE E
Sbjct: 252 IWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEK 311
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R R+ + +L+TLY G EVYR+W + FP N+ Y ++ LV L D+ G
Sbjct: 312 RTTGREKKCFHYLMTLYSHLGKKEEVYRVWNWYKATFPTIHNLGYQEVLSALVRLGDIEG 371
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE ++EW S +++D + N+++ YA+EG + AE+ R +G +P TWEI
Sbjct: 372 AELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGT 431
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
YL++G A+ CLEKA T KW P + + + +F+++ D + A+
Sbjct: 432 AYLKDGQSSEALSCLEKA--TAVASPSKWRPRPTNVESLLANFKEKNDAESAD 482
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 192/347 (55%), Gaps = 3/347 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +K+ ++KMKEL S + +N LM LY +TG EK+ ++ EMK + I PD ++Y
Sbjct: 151 LVDKSLYHMQKMKELGFASSPLNYNDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYR 210
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ M + AA +D+ G E ++EEM+ ++ DW T+S +ASIYV+A L EKA LK+ E
Sbjct: 211 ICMSSCAARSDLKGVEEILEEMENQSHISIDWVTYSTVASIYVKASLKEKALIYLKKCEQ 270
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +RD Y LI+L G EV R+W ++ N Y+ M+ LV L++L
Sbjct: 271 K-VNRDALGYNHLISLNASLGIKDEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEE 329
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+K +EWES C YD RV NV++ Y ++G +E AE + + ++ +P +W I +
Sbjct: 330 ADKLLQEWESSCQCYDFRVPNVLLIGYCQQGLIEKAEAMLKDIVKKQKNPTPNSWAIIAA 389
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ +M+ A +C+++A+ T + + W P + I + + + DV+ E F+ +L+
Sbjct: 390 GYVNKQNMEKAFNCMKEAL-TVQAENKGWRPKANLISSILSWLGENGDVEDVEAFVNLLE 448
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
V E++ LI+ Y G+ +L + K++ E +K +L
Sbjct: 449 TKVPK-DREIYHTLIKAYIRGGKQVDGVLENMTANKIDEDEETKTIL 494
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 203/355 (57%), Gaps = 10/355 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++EKAEAL+EKM E S + FN +++L+ EK+PA+I+ +K ++ PD TYN
Sbjct: 164 LSEKAEALMEKMSECGFLKSPLSFNHMLSLHISNKQLEKVPALIEGLKKNT-KPDVVTYN 222
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + ND AE + EMK+ ++ DW +FS LA++Y + L EKA LKE+E
Sbjct: 223 LLLNVCTLQNDTEAAENIFLEMKKT-KIQPDWVSFSTLANLYCKNQLTEKAAATLKEMEK 281
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + L++LY G+ +EVYRIW+ L+ +F ++ Y+ MI LV L +L
Sbjct: 282 MAFKSNRLSLSSLLSLYTNLGDKNEVYRIWKKLKSSFRKMSDREYMCMISSLVKLNELEE 341
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK + EWES T D RV+NVM+GAY K+ ++E AE R ++G P+ TWE+ +
Sbjct: 342 AEKLYTEWESVSGTRDTRVSNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELLTW 401
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL+ M+ + KA++ + KW ++ + E++ +++G E L IL+
Sbjct: 402 GYLKENQMEKVLHFFRKAVNRVK----KWNADERLVKGVCKKLEEQGNINGVEQLLLILR 457
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL---EAICV 352
A + E++ L+RTYA AG+ ++ R++ + V++++ +++LL +CV
Sbjct: 458 NA-GHVDTEIYNSLLRTYAKAGKMPLIVAERMERDNVQLNDETRELLRLTSKMCV 511
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 199/347 (57%), Gaps = 7/347 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+++KAEAL EKM E S +P+N ++++Y G EK+P +I+E+K + PD TYN
Sbjct: 177 LSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYN 235
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ A A+ ND+ GAE+V + K + ++ DW T+S L ++Y + EKA ALKE+E
Sbjct: 236 LWLTAFASGNDVEGAEKVYLKAKEE-KLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEK 294
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ ++ AY LI+L+ G+ V W+ ++ +F + YL+MI +V L +
Sbjct: 295 LVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQ 354
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ + EWES T D R+ N+++ Y + E+ ER +G +P+ TWEI +
Sbjct: 355 AKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTW 414
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL+ DM+ +DC KAID+ + KW + ++ + E++ +V GAE + +L+
Sbjct: 415 AYLKRKDMEKVLDCFGKAIDSVK----KWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQ 470
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
KA + +++ L+RTYA AG + ++ R+ + VE+ E +K+L+
Sbjct: 471 KA-GYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELI 516
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 171/300 (57%), Gaps = 5/300 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKAE+L+EKM++ + ++PFN +MTLY +K+ +I EM A +I D Y+YN
Sbjct: 186 MREKAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYN 245
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ + + I E V E+MK D + +WTTFS +A++Y++ G EKAE L+ +E+
Sbjct: 246 IWLSSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRVES 305
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R RD Y +L++LYG GN E+YR+W + F N+ Y +I LV + D+ G
Sbjct: 306 RITGRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDDIEG 365
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK ++EW ++YD R+ N+++G Y + G L+ AE + G PN+ TWEI +D
Sbjct: 366 AEKIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSSTWEILAD 425
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ R + A+ C ++A G K W P I +F + E+E D+ + G LE L
Sbjct: 426 GHTREKRISEALSCFKEAF---LAQGSKSWKPKPVIISSFFKLCEEEADM-ASTGVLEDL 481
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 199/347 (57%), Gaps = 7/347 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+++KAEAL EKM E S +P+N ++++Y G EK+P +I+E+K + PD TYN
Sbjct: 177 LSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYN 235
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ A A+ ND+ GAE+V + K + ++ DW T+S L ++Y + EKA AL+E+E
Sbjct: 236 LWLTAFASGNDVEGAEKVYLKAKEE-KLNPDWVTYSVLTNLYAKTDNVEKARLALREMEK 294
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ ++ AY LI+L+ G+ V W+ ++ +F + YL+MI +V L +
Sbjct: 295 LVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQ 354
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ + EWES T D R+ N+++ Y + E+ ER +G +P+ TWEI +
Sbjct: 355 AKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTW 414
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL+ DM+ +DC KAID+ + KW + ++ + E++ +V GAE + +L+
Sbjct: 415 AYLKRKDMEKVLDCFGKAIDSVK----KWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQ 470
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
KA + +++ L+RTYA AG + ++ R+ + VE+ E +K+L+
Sbjct: 471 KA-GYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELI 516
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 169/300 (56%), Gaps = 7/300 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKAE L ++M++ ++PFN MTLY +K+ +I EM +I D Y+YN
Sbjct: 186 MREKAETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYN 245
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+W+ + + E+V E+MK D + +WTTFS +A++Y++ G FEKAE L+ +E+
Sbjct: 246 IWLSSCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDCLRRVES 305
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R RD Y +L++LYG GN EVYR+W + FP+ N+ Y +I LV L D+ G
Sbjct: 306 RITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVRLDDIEG 365
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK ++EW S +YD R+ N+ I AY +G L+ A+ + G PN+ TWEI +
Sbjct: 366 AEKIYEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNSNTWEILAQ 425
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDV---DGAEGFL 296
++ A+ CL++A T G K W P+ + +F + E+E D+ + EGFL
Sbjct: 426 GHISERRTSEALSCLKEAFVT---PGSKSWKPNPANVTSFFKLCEEEADMANKEALEGFL 482
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 170/300 (56%), Gaps = 2/300 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAEALL M++ +PFN +MTLY +K+ A++ EMK I D Y+YN+W
Sbjct: 185 EKAEALLHTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIW 244
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ + E V ++MK D + +WTTFS +A++Y++ G EKAE AL+++E R
Sbjct: 245 LSSCGSLGSVEKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETEKAEDALRKVEARI 304
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
R+ Y +L++LYG GN E+YR+W + P+ N+ Y ++ L + D+ GAE
Sbjct: 305 TGRNRIPYHYLLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGYHALVSSLARMGDIEGAE 364
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K ++EW ++YD R+ N+++ Y K +LE AE L + G P++ TWEI +D +
Sbjct: 365 KVYEEWLPVKSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGKPSSSTWEILADGH 424
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R + A+ CL KA + G W P + F + E+E DV E LE+L+++
Sbjct: 425 TRKRCIPEALTCLRKAF-SAEG-SSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQS 482
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD--SYTY 59
TEKAE L K++ G + +P++ L++LY G+ +++ + K S++P + Y
Sbjct: 290 TEKAEDALRKVEARITGRNRIPYHYLLSLYGSVGNKKELYRVWNVYK--SVVPSIPNLGY 347
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 112
+ + +LA + DI GAE+V EE + + D + L ++YV+ EKAE
Sbjct: 348 HALVSSLARMGDIEGAEKVYEEW-LPVKSSYDPRIPNLLMNVYVKNDQLEKAE 399
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 194/348 (55%), Gaps = 8/348 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+L++M + ++PFN +M+LY G EK+P +I+E++ +I PD TYN+W
Sbjct: 156 DKAEAMLKEMADAGYLTCALPFNHMMSLYMSVGELEKVPEMIKELRRYTI-PDLVTYNIW 214
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + N + AE+V + MK D RV DW TFS LASIY+ AGL K AL E+E R
Sbjct: 215 LTYCSRKNSVKSAEKVFDLMK-DDRVVPDWMTFSLLASIYINAGLHVKGRDALVEMEKRA 273
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ ++ +AY L+T+Y + + R+W +R F ++ Y M+ L D+ AE
Sbjct: 274 SRKERAAYSSLLTMYASLSDRGNLDRVWSKMRQTFRKFSDAEYKCMLTSLTRFGDIAAAE 333
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ EWES T D R+ N ++ Y K G +E AE + ++G P+ TWE+F Y
Sbjct: 334 FVYGEWESQSGTKDSRIPNTILSFYIKNGEMEKAESFLQYIVQKGVKPSYSTWELFVWGY 393
Query: 243 LRNGDMKLAV-DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
L N + V +CL+KA+ + KW P+ + + E++ D++ AE L +L+
Sbjct: 394 LGNDERTDKVMECLKKALSSLE----KWEPNPQLVAALFSQIEKKGDIEAAEELLVVLRG 449
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 349
A + E++ ++RTYA A ++ R+ +KV + + +++LL++
Sbjct: 450 A-GYVTTEIYNLVLRTYAKAEMMPLIIDERMDQDKVSMDDETRRLLKS 496
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 171/302 (56%), Gaps = 2/302 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAEALL M++ +PFN +MTLY +K+ A++ EMK I D Y+YN+W
Sbjct: 186 EKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIW 245
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ + E V ++MK D + +WTTFS +A++Y++ G EKAE AL+++E R
Sbjct: 246 LSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARI 305
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
R+ Y +L++LYG GN E+YR+W + P+ N+ Y ++ LV + D+ GAE
Sbjct: 306 TGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 365
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K ++EW ++YD R+ N+++ AY K +LE AE L + G P++ TWEI + +
Sbjct: 366 KVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGH 425
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R + A+ CL A + G W P + F + E+E DV E LE+L+++
Sbjct: 426 TRKRCISEALTCLRNAF-SAEG-SSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQS 483
Query: 303 VD 304
D
Sbjct: 484 GD 485
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD--SYTY 59
TEKAE L K++ G + +P++ L++LY G+ +++ + K S++P + Y
Sbjct: 291 TEKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYK--SVVPSIPNLGY 348
Query: 60 NVWMRALAAVNDISGAERVIEE 81
+ + +L + DI GAE+V EE
Sbjct: 349 HALVSSLVRMGDIEGAEKVYEE 370
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 171/302 (56%), Gaps = 2/302 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAEALL M++ +PFN +MTLY +K+ A++ EMK I D Y+YN+W
Sbjct: 186 EKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIW 245
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ + E V ++MK D + +WTTFS +A++Y++ G EKAE AL+++E R
Sbjct: 246 LSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARI 305
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
R+ Y +L++LYG GN E+YR+W + P+ N+ Y ++ LV + D+ GAE
Sbjct: 306 TGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 365
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K ++EW ++YD R+ N+++ AY K +LE AE L + G P++ TWEI + +
Sbjct: 366 KVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGH 425
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R + A+ CL A + G W P + F + E+E DV E LE+L+++
Sbjct: 426 TRKRCISEALTCLRNAF-SAEG-SSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQS 483
Query: 303 VD 304
D
Sbjct: 484 GD 485
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPD--SYTY 59
TEKAE L K++ G + +P++ L++LY G+ +++ + K S++P + Y
Sbjct: 291 TEKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYK--SVVPSIPNLGY 348
Query: 60 NVWMRALAAVNDISGAERVIEE 81
+ + +L + DI GAE+V EE
Sbjct: 349 HALVSSLVRMGDIEGAEKVYEE 370
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 189/346 (54%), Gaps = 11/346 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + +KM E +S+ F +LM++Y + P K+P ++ MK I +TY
Sbjct: 205 MLDKALSHFDKMDEFGY-LTSLSFTNLMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYI 263
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+WM + AA+ND+ ERV EEMKR+ DW T+SNLA+IY++AG FEKAE LK++E
Sbjct: 264 LWMNSCAALNDLGEVERVYEEMKREDEDKIDWKTYSNLAAIYIKAGFFEKAELMLKKVEG 323
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R Y FL++LY TGN+ EVYR+W +L+ P T N SYL M+ L L D+ G
Sbjct: 324 VMKPRQRETYHFLLSLYAGTGNVKEVYRVWGTLKKITPVT-NRSYLIMLSNLRRLNDMEG 382
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
K FKEWES +YD R+ V + AY + + A + E A + P + E+F
Sbjct: 383 IIKLFKEWESRHVSYDSRLVGVAVQAYLSQNMDKEAVLVFEEALKSCRGPFFRIREMFMA 442
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
L G + A+ LE A+ K+ PS + + F++++E+E D+DG + +IL+
Sbjct: 443 SLLEKGQLDGAMSHLEAAL--SEASDYKYQPSPQVVSAFLKYYEEETDLDGVDELSKILR 500
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKL 346
D E I+T A +SP + LK E V++A + L
Sbjct: 501 SHNFD------ESYIKTCITASESSPGIHTVLK-EDSYVNQAHENL 539
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 191/346 (55%), Gaps = 2/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+K+ + L+KMKE+ S + +N +M LY G EK+P ++ EMK S + PD+++Y +
Sbjct: 156 TDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRI 215
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + AA +DI G E+V++EM+R + DW T++ A+ Y++AGL +KA ALK+ E R
Sbjct: 216 CINSYAAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEER 275
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
RD Y LI+LY GN +EV R+W + A N Y+ M++ LV L +L A
Sbjct: 276 LDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEA 335
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK +EWES YD RV N++I Y+++G E AE + + +G +W +
Sbjct: 336 EKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPDSWGTVASG 395
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+ G+M+ AV+C++ AI + G+ P+S I + + V+ E F+ L+
Sbjct: 396 YMDEGEMEKAVECMKAAISLHVNNKGR-KPNSRVIAGILSWLGDKGRVEDVEAFVGSLRI 454
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + ++ LI AG+ +L +K +K+ E +KK+L
Sbjct: 455 VI-PMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKIL 499
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA L+K +E + +N L++LYA G+ ++ + K++ + Y
Sbjct: 261 LPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYI 320
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ +L + ++ AE+V+ E + G D+ + + Y E GLFEKAE LKEL
Sbjct: 321 TMLESLVRLGELEEAEKVLREWESSGN-CYDFRVPNIVIIGYSEKGLFEKAEAMLKEL 377
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 190/346 (54%), Gaps = 2/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+K+ + L+KMKE+ S + +N +M LY G EK+P ++ EMK S++ PD+++Y +
Sbjct: 156 TDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRI 215
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A +DI G E V++EM+R + DW T++ A+ Y++AGL +KA ALK+ E R
Sbjct: 216 CINSYGAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEER 275
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
RD Y LI+LY GN +EV R+W + A N Y+ M++ LV L +L A
Sbjct: 276 LDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEA 335
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK +EWES YD RV N++I Y+++G E AE + + +G +W +
Sbjct: 336 EKVLREWESSGNCYDFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPNSWGTVASG 395
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+ G+M+ AV+C++ AI + G+ P+S I + + V+ E F+ L+
Sbjct: 396 YMDEGEMEKAVECMKAAISLHVNNKGR-KPNSRVIAGILSWLGDKGRVEDVEAFVGSLRI 454
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + ++ LI AG+ +L +K +K+ E +KK+L
Sbjct: 455 VI-PMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKIL 499
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA L+K +E + +N L++LYA G+ ++ + K++ + Y
Sbjct: 261 LPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINRDYI 320
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ +L + ++ AE+V+ E + G D+ + + Y E GLFEKAE LKEL
Sbjct: 321 TMLESLVRLGELEEAEKVLREWESSGN-CYDFRVPNIVIIGYSEKGLFEKAEAMLKEL 377
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 185/347 (53%), Gaps = 7/347 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE+ + K+ L + P+N +M LY EK+P +I EMK + + + +YN+WM
Sbjct: 165 KAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLSYNLWM 224
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V +++ AE V +EM D V W+T ++LA++Y++AG +KA LK+ E + +
Sbjct: 225 GAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLANVYIKAGFVDKALLVLKDAEMKLS 284
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y FLITLY N V R+W + + Y+ +I LV + DL AE+
Sbjct: 285 TNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGGRIPCADYMCVISCLVKVGDLVAAEQ 344
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F EWE+ C YDIRV+NV++GAY + G + AE RG PN KTWEI + ++
Sbjct: 345 VFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKAESFHLHTVERGGCPNYKTWEILMEGWV 404
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
++ M A+D ++K + + W PS + HFE+ + + A ++ KAV
Sbjct: 405 KSQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNFEDANHYI----KAV 460
Query: 304 DDLGV---EVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
LGV +++ +R Y A R + +L+ ++ +++E+ + + L+
Sbjct: 461 HGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIELDDETSALV 507
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 195/349 (55%), Gaps = 7/349 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAEA+L++M+E + SS P+N ++ LYA+ G EKI + +EM+ + I D YT
Sbjct: 165 VQKAEAVLQEMREKGIATSSFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRN 224
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-EN 120
M A A +DISG ER++ +++ ++ W +S AS Y++ GL EKA + L+++ E
Sbjct: 225 LMAAYVAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKVGLIEKALKMLRKMEET 284
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ SA+ +L+TLY +TG E+YR+W S + + MI L + D+ G
Sbjct: 285 MPIGKKTSAFNYLLTLYAKTGRKDELYRVWNSYK-PLAEVKETQFCCMISSLEKVDDIEG 343
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F+EWES C YD RV N ++ AY ++G L E + G P A TW +
Sbjct: 344 AERIFEEWESQCMMYDFRVLNKLLLAYCRKG-LYTKAEAAFKKAAEGRTPYASTWITMAM 402
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ M AV+ L+KAI R W P+ T+ T + + E++ DV+G E ++ L
Sbjct: 403 SYIGQNQMSKAVEMLKKAISVSRKG---WKPNPITLTTCLDYLEEQGDVEGIEEIVKSL- 458
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 349
K+ + L +++ L+RTY AAG ++ ++KM+ + E + K+LE+
Sbjct: 459 KSTESLTRDIYHRLVRTYTAAGIPVTKVIDKMKMDNIAADEETHKILES 507
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 201/346 (58%), Gaps = 7/346 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEAL+EKM++ + + +P+N +++LY G +K I++E+K S+ PD T+N+W+
Sbjct: 155 KAEALMEKMRDCSFVKNPLPYNHMISLYIADGEFDKAKRIVEELKKSTT-PDVVTFNLWL 213
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A++ND+ A++V+ E+K+ ++ ADW T+S L ++Y++ L E A LKE+E R +
Sbjct: 214 SMCASLNDVESAKKVLLELKKL-KIEADWITYSTLTNLYLKNKLLEDAVSTLKEMEKRAS 272
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ AY L++LY G+ V+RIW ++ F + Y M+ L+ L+++ AE
Sbjct: 273 RKNRLAYSSLLSLYTNMGDKDAVHRIWNKMKSLFCKMNDAEYTCMLSSLIKLEEIEKAEN 332
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ EWES T D +V N+++ AY ++E++E R +G P TWE+ + +L
Sbjct: 333 LYTEWESVSGTGDPQVANILLAAYINRNQIEDSENFYRRMVEKGVCPCYTTWELLTWGHL 392
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ M+ +DC +KAI + W P +R + E++ + +GAE FL +L+ A
Sbjct: 393 KTKQMEKVLDCFKKAITIVK----TWSPDKRLVREVFKILEEKGNAEGAEEFLVMLRNA- 447
Query: 304 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 349
+ E++ L+RTYA AG+ ++ R+K + VE+ E + +L++
Sbjct: 448 GYVSTEIYNSLLRTYAKAGKMPLIVTERMKKDGVELDEETHRLIKT 493
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 173/303 (57%), Gaps = 1/303 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA A +KMKEL F+ +P+++LM LYA E++P+++ EMK++ I+P++++YN
Sbjct: 167 LVDKALAHFQKMKELGFVFTPLPYSNLMILYANVEQHERVPSVMAEMKSNGIVPNNFSYN 226
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A D SG E +EEM+ +V DW T++++AS Y++ L EKA AL++ E
Sbjct: 227 ICINAYGTRADFSGLENTLEEMEFASQVVVDWRTYADVASHYIKGDLREKAYSALQKAEA 286
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +D AY LI+LYG G+ SE+ R+W L N Y M+ VLV L ++
Sbjct: 287 KMDEKDSFAYSHLISLYGHLGDKSEIKRLWVLQMLKCKGCINKGYKYMLTVLVKLDEIAE 346
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE K+WES +D +V N+++ Y + G L+ AE L + R+G P+A +W I +
Sbjct: 347 AEDLLKKWESSKNEFDFKVPNILLKGYCQWGLLDKAEALLDGFLRKGKKPSATSWAIVAS 406
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y GD+ A + ++A+ D G W+P I +++ E +V E F+++LK
Sbjct: 407 AYAEKGDVPRAYELTKRALSMCVPDSG-WIPEPSMIEVILKYLGDEGEVKDVEAFIDLLK 465
Query: 301 KAV 303
V
Sbjct: 466 VVV 468
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 193/347 (55%), Gaps = 8/347 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+L +M + ++PFN +M++Y +G EK+P +I+E++ +I PD TYN+W
Sbjct: 148 DKAEAMLREMADAGYLTCALPFNHMMSMYMSSGELEKVPEMIKELRRYTI-PDLVTYNIW 206
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + N + AE+V + MK D +V DW TFS +ASIY+ AGL K AL E+E R
Sbjct: 207 LTYCSRKNSVKTAEKVFDLMK-DDKVFPDWMTFSLMASIYINAGLHVKGRDALVEMEKRA 265
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ ++ +AY L+TLY + + R+W +R F ++ Y M+ L D+ AE
Sbjct: 266 SRKERTAYSSLLTLYASLSDRGNLDRVWSKMREIFRKFSDTEYKCMLTSLTRFGDITAAE 325
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ EWES T D R+ N ++ + K G++E AE + ++G P+ TWE+F Y
Sbjct: 326 SVYSEWESESGTRDSRIPNTILSFHIKNGKMEMAESFLQHIMQKGVKPSYSTWELFVWGY 385
Query: 243 LRNGD-MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
L N + + ++CL+KA+ + KW P+ + + E+ D++ AE L +L+
Sbjct: 386 LGNDERIDKILECLKKALSS----LDKWEPNPQLVAALFSLIEKRGDIEAAEELLVVLRG 441
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE 348
A + E++ ++RTY+ A ++ R+ +KV + E ++ LL+
Sbjct: 442 A-GYVTTEIYNSVLRTYSKAEMMPLIIDERMDQDKVSMDEETRGLLK 487
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 190/347 (54%), Gaps = 3/347 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +K+ + L+KMKEL + +P+N LM LY T EKIP ++ EM+ + I PD+++Y
Sbjct: 153 VIDKSLSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYR 212
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A +D++ E+++EEM+ + DW T+S +A+ Y++AGL EKA LK+ E
Sbjct: 213 LCINSYGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAET 272
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ H+D Y LI+LY G+ +E+ R+W + A N Y+ M+ LV L +L
Sbjct: 273 K-LHKDPLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELED 331
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E KEWES YD RV N ++ + ++G +E AE + G P +W I +
Sbjct: 332 TEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAA 391
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ +M+ A +C+++AI + G W P + I + + +DV+ E F+ L
Sbjct: 392 GYIEKQNMEKAFECMKEAIAVLAENKG-WRPKPKVISSILSWLGDNRDVEEVETFVSAL- 449
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
KAV + E++ IR AG+ +L +K +K++ E ++K+L
Sbjct: 450 KAVIPMDREMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRKIL 496
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 186/327 (56%), Gaps = 14/327 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAEA ++KM+E++ SS P+N L+ LY++TG+ KI A+IQEM++ +I D++T
Sbjct: 139 VEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRN 198
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A A +DIS E+ + M+ D ++ DW +S AS Y++ GL +KA LK++E+
Sbjct: 199 LMVAYVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESN 258
Query: 122 NAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H + LSA++FL++LY +TG+ E+YR+W + ++ +Y MI L L D+ G
Sbjct: 259 RPHLERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYEYPE--AYSCMITCLTKLDDIEG 316
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK F+EWE C YD RV N ++ AY K + AE L + P A TW I +
Sbjct: 317 AEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERM-PYASTWNILAK 375
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ + M AV+ L+KAI GR W P+S + + + E + +++ E + K
Sbjct: 376 GYVEDKQMPKAVEMLKKAISVGRKG---WRPNSIILDACIEYLEGQGNLEEIEEIARLCK 432
Query: 301 KAVDDLGV---EVFEPLIRTYAAAGRT 324
+LG+ ++ L+RT AA ++
Sbjct: 433 ----NLGIPDGDIHHRLLRTSAAGEKS 455
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 168/300 (56%), Gaps = 1/300 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE+L + M+ ++P N +MTLY K+ + EM +I D YTYN+W
Sbjct: 199 EKAESLFDTMRSKGYVIHALPINVMMTLYMNLNEYAKVDMLASEMMEKNIQLDIYTYNIW 258
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + + E+V E+M+RD + +W+TFS LAS+Y+ EKAE+ L+++E R
Sbjct: 259 LSSCGSQGSVEKMEQVFEQMERDPTIVPNWSTFSTLASMYIRMNQNEKAEKCLRKVEGRI 318
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + +L++LYG G EVYR+W + + FP N+ Y +I LV L D+ GAE
Sbjct: 319 KGRDRIPFHYLLSLYGSVGKKDEVYRVWNTYKSIFPRIPNLGYHAIISSLVKLDDIEGAE 378
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K ++EW S ++YD R+ N+++G Y K+ + A E+ G PN+ TWEI S+ +
Sbjct: 379 KLYEEWISVKSSYDPRIGNLLMGWYVKKDDTDKALSFFEQISNDGCIPNSNTWEILSEGH 438
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ + + A+ CL++A G W P + F+ +++ D++ AE + +L+++
Sbjct: 439 IADKRISEALSCLKEAFMVA-GGSKSWRPKPSYLSAFLELCQEQNDMESAEVLIGLLRQS 497
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 176/303 (58%), Gaps = 1/303 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA A +KMKEL F+++P+N+LM+LY E++P+++ EMK++ I+PD+++Y
Sbjct: 167 LVDKALAHFQKMKELGFVFTALPYNNLMSLYTNIEQHERVPSVMAEMKSNGIVPDNFSYR 226
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + D G E +EEM+ + ++ DW T++ +AS Y++ L EKA ALK+ E
Sbjct: 227 ICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYTVVASQYIKGDLREKAYSALKKAEA 286
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +DL+AY+ LI+LYG G+ SEV R+W N Y N++ VLV L ++
Sbjct: 287 KMGIKDLAAYRHLISLYGHLGDKSEVKRLWAVQMSNCQRHLNTDYTNILAVLVKLDEIAE 346
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE KEWE+ +D +V NV++ Y ++G L+ AE L + +G P + +WEI +
Sbjct: 347 AEDLLKEWETSKNEFDFKVPNVLLTWYCQKGLLDKAEALLDGFLIKGKMPPSTSWEIVAS 406
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y GD+ A + + A+ + G WVP I +++ E++V E F+++LK
Sbjct: 407 GYTEKGDVARAYELTKNALYMYAPNSG-WVPEPSMIEMILKYLGDEREVKDVEAFIDLLK 465
Query: 301 KAV 303
AV
Sbjct: 466 VAV 468
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 189/349 (54%), Gaps = 9/349 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEAL+ K+ L L + PFN +M LY T EK+ +I +MK + I + +YN+WM
Sbjct: 149 KAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIALNLLSYNLWM 208
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ V+ + E V +EM D V W+T + LA+IY +AG+ +KA ALK E +
Sbjct: 209 SSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKALLALKNAEKILS 268
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
L Y FL+T Y N V R+W + + +Y+ ++ LV + DL AEK
Sbjct: 269 TSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKVGDLLEAEK 328
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F++WE C YDIRV+NV++GAY ++G + AE L RG PN KT EI + ++
Sbjct: 329 VFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPNYKTLEILMEGWV 388
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
++ M A+D + +AI + W PS I + H E+ ++ + A F+++ +
Sbjct: 389 KSQKMDKAIDAMTQAISM--LEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQV----I 442
Query: 304 DDLGVE---VFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 349
LGV +++ L+R + A R + +L+ ++ +K+E+ + + L++A
Sbjct: 443 HHLGVASLPLYKVLLRMHLHAQRAAFDILKMMEKDKIELDDETSALVQA 491
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 190/347 (54%), Gaps = 3/347 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +K+ + L+KMKEL + +P+N LM LY T EKIP ++ EM+ + I PD+++Y
Sbjct: 153 VIDKSLSHLQKMKELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYR 212
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A +D++ E+++EEM+ + DW T+S +A+ Y++AGL EKA LK+ E
Sbjct: 213 LCINSYGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAET 272
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ H+D Y LI+LY G+ +E+ R+W + A N Y+ M+ LV L +L
Sbjct: 273 K-LHKDPLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELED 331
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E KEWES YD RV N ++ + ++G +E AE + G P +W I +
Sbjct: 332 TEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAA 391
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ +M+ A +C+++AI + G W P + I + + +DV+ E F+ L
Sbjct: 392 GYIEKQNMEKAFECMKEAIAVLAENKG-WRPKPKVISSILSWLGDNRDVEEVETFVSAL- 449
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
KAV + E++ IR AG+ +L +K +K++ E ++K+L
Sbjct: 450 KAVIPMDREMYHAQIRASIRAGKEVDGILDSMKADKIDEDEETRKIL 496
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 180/321 (56%), Gaps = 16/321 (4%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
EKMK ++ + +N LM LY K G PEKI + +EM+ S I D + Y + + +
Sbjct: 175 EKMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTFEEMRESGISADKFAYFTLIESYITM 234
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
ND+ AE+V+ E+++ V W+ ++ +A+ Y++ LF KAE A+K+ E DL +
Sbjct: 235 NDLDAAEKVLAELQKVAPV--HWSLYTLMANNYIKLKLFGKAEVAIKKAEEGMDKADLRS 292
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
+ L++L+ GN +EV R+W+SL+ F N SYL M+Q L + D ++ F+EW+
Sbjct: 293 WYALLSLHAHCGNSTEVKRVWKSLKSTFKKCLNRSYLVMLQALSMIDDFESLQQIFQEWQ 352
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE-----IFSDYYLR 244
S YD R+ NV+I AY +G ++ AE +++ +G W IF+++YL
Sbjct: 353 SSHEHYDKRIANVVIKAYLDKGMIDEAEAIRQSTMAQG------HWHEGMVCIFAEFYLD 406
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
D+ A++ L A + KWVPS E + F++H+E+ D GAE FLE LKK ++
Sbjct: 407 KSDVNAALEILRDAKNMVMAR--KWVPSKELVSRFLKHYEESNDASGAESFLECLKK-LE 463
Query: 305 DLGVEVFEPLIRTYAAAGRTS 325
L ++ FE +TY AGR S
Sbjct: 464 CLDLDAFEAAKQTYVVAGRAS 484
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 155/258 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAEAL+ K+ +L L S PFN +M LY T E++P +I +MK + I + +YN+W
Sbjct: 156 EKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLW 215
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A + V+ ++ AE V ++M D V W+T S LA+IY+++GL +KA ALK E +
Sbjct: 216 MSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKL 275
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + Y FLIT+Y N EV R+W + + + +Y+ ++ LV L D+ AE
Sbjct: 276 SAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLGDIAEAE 335
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+EWES C YDIRV+NV++GAY + G ++ AE L RG PN KTWEI + +
Sbjct: 336 RIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGW 395
Query: 243 LRNGDMKLAVDCLEKAID 260
+++ +M A++ ++K
Sbjct: 396 MKSQNMDKAINAMKKGFS 413
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 168/300 (56%), Gaps = 1/300 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE+L + M+ ++PFN +MTLY K+ + EM +I D YTYN+W
Sbjct: 200 EKAESLFDTMRSKGYVIHALPFNVMMTLYMNLNEYAKVDILASEMMEKNIQLDIYTYNIW 259
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + + E+V E+M++D + +W+TFS +AS+Y+ EKAE L+++E R
Sbjct: 260 LSSCGSQGSVEKMEQVFEQMEKDPSIIPNWSTFSTMASMYIRMDQNEKAEECLRKVEGRI 319
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + +L++LYG G EV R+W + + FP+ N+ Y +I LV L D+ AE
Sbjct: 320 KGRDRIPFHYLLSLYGSVGKKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLDDIEVAE 379
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K ++EW S ++YD R+ N++IG Y K+G + A E+ G PN+ TWEI S+ +
Sbjct: 380 KLYEEWISVKSSYDPRIGNLLIGWYVKKGDTDKALSFFEQMLNDGCIPNSNTWEILSEGH 439
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ + + A+ CL++A G W P + F+ +++ D++ AE + +L+++
Sbjct: 440 IADKRISEAMSCLKEAF-MAAGGSKSWRPKPSYLSAFLELCQEQDDMESAEVLIGLLRQS 498
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 186/345 (53%), Gaps = 8/345 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAEA+L +M + ++PFN +M+LY TG E++P +I+E++ + +PD TYN+W
Sbjct: 149 EKAEAMLAEMARVGYLTCALPFNHMMSLYMATGELERVPEMIKELRRYT-LPDLVTYNIW 207
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + + AE+V MK D V DW TFS L SIY+ AGL + AL E+E R
Sbjct: 208 LTYCSKKDSVKSAEKVFGLMKDDC-VVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKRA 266
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ ++ +AY L+TLY + + R+W +R F ++ Y M+ L+ D+ AE
Sbjct: 267 SRKERAAYSSLLTLYASLSDRGNLDRVWNKMRGTFRKFSDTEYKCMLTSLLRFDDIAAAE 326
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F EWES T D R+ N ++ Y K G ++ AE + +G P+ TWE F Y
Sbjct: 327 SIFSEWESTSGTRDSRIPNTILSYYIKNGMIKKAESFLDHIVEKGVKPSYSTWEAFVWGY 386
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L + K+ ++C++KA+ KW P+ E E+ D++ AE L I + A
Sbjct: 387 LGDKTDKV-LECMKKALSCLE----KWEPNHELATAIFSQIEKTGDIEAAEKLLVIFRDA 441
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + E++ ++RTYA A ++ R++ +KV + +K+LL
Sbjct: 442 -EYVTTEMYNSVLRTYAEAKLMPLIVDERMEQDKVAMDVETKRLL 485
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 185/327 (56%), Gaps = 18/327 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L EKM+ +N+ +++ + +LM+LY KTG PEKI +EM+A+ + D++TY +
Sbjct: 154 EKALELYEKMRTMNIVPNTLVYKNLMSLYLKTGQPEKILQTFEEMRANGVRTDNFTYYML 213
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +N + E+ +E++++ + W+ ++ LA Y + G F+KA LK+ E
Sbjct: 214 TESHIMLNGLESTEKFLEDLEKS--IPVHWSLYTRLADSYNKVGQFDKAGLTLKKAEEVM 271
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ A+ L++LY +GNLSEV R+W SLR ++N SYL M+ L L D +
Sbjct: 272 DRGEMFAWHNLLSLYASSGNLSEVKRVWSSLRSELKISSNRSYLVMLSALKKLDDFDCMQ 331
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+EWE +YD+R+ NVMI AY + + AE L++ A +G N T+ IF++ Y
Sbjct: 332 QVFQEWELTQESYDMRIPNVMIKAYLAKDMTDEAEALRQTAMAQGHS-NPLTFYIFTESY 390
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGK------WVPSSETIRTFMRHFEQEKDVDGAEGFL 296
L E A++ R D GK W P E ++ F++HFE+ KDVDG E F
Sbjct: 391 LEKSRT-------EAALEVWR-DAGKMVKTPNWAPPPELVKRFLKHFEEAKDVDGMESFC 442
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGR 323
L+K ++ L + + L RTY AAGR
Sbjct: 443 ACLEK-LECLDTDARDALSRTYVAAGR 468
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 176/308 (57%), Gaps = 11/308 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAEA ++KM+E++ SS P+N L+ LY++TG+ KI A+IQEM++ +I D++T
Sbjct: 139 VEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRN 198
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A A +DIS E+ + M+ D ++ DW +S AS Y++ GL +KA LK++E+
Sbjct: 199 LMVAYVAASDISAMEKFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESN 258
Query: 122 NAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H + LSA++FL++LY +TG+ E+YR+W + ++ +Y MI L L D+ G
Sbjct: 259 RPHLERLSAFKFLLSLYARTGHKQELYRVWNLYKPSYEYPE--AYSCMITCLTKLDDIEG 316
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK F+EWE C YD RV N ++ AY K + AE L + P A TW I +
Sbjct: 317 AEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERM-PYASTWNILAK 375
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ + M AV+ L+KAI GR W P+S + + + E + +++ E + K
Sbjct: 376 GYVEDKQMPKAVEMLKKAISVGRKG---WRPNSIILDACIEYLEGQGNLEEIEEIARLCK 432
Query: 301 KAVDDLGV 308
+LG+
Sbjct: 433 ----NLGI 436
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 180/337 (53%), Gaps = 3/337 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++AEAL+EK+ L + PFN +M LY +G EK+ ++ MK + I + +YN
Sbjct: 158 MVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYN 217
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+WM A V+ ++ E V +EM D V W++ LA++Y+++G EKA L++ E
Sbjct: 218 LWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEK 277
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y FLITLY GN V R+W + + ++Y+ ++ LV DL
Sbjct: 278 MLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEE 337
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F EWE+ C YD+RV+NV++GAY + G + AE L RG PN KTWEI +
Sbjct: 338 AERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILME 397
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+++ +M+ A+D + + R W PS + +FE+E+ ++ A ++ L
Sbjct: 398 GWVKCENMEKAIDAMHQVFVLMR--RCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLH 455
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ + + ++ L+R + A R + + +K++K+
Sbjct: 456 R-LGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLDKL 491
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 183/345 (53%), Gaps = 7/345 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAEA++ +M ++PFN +M+LY +G E++P +I+E++ ++ PD TYN+W
Sbjct: 148 EKAEAMMAEMARAGYLTCALPFNHMMSLYMASGELERVPEMIKELRRYTV-PDLVTYNMW 206
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + AE+V MK D RV DW TFS L SIY+ AGL + AL E+E
Sbjct: 207 LTYCSKKKSVKSAEKVFALMK-DDRVVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKMA 265
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ ++ +AY L+TLY + + R+W +R F ++ Y M+ L D+ AE
Sbjct: 266 SRKERAAYSSLLTLYASLSDRGNLDRVWNKMRETFRKFSDTEYKCMLTSLTRFNDIAAAE 325
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
++EWES T D R+ N ++ Y K G +E AE + +G P+ TWE+F Y
Sbjct: 326 GLYREWESASGTRDSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVKPSYSTWELFIWGY 385
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L + ++CL+KA+ + KW P+ E E+ D++ AE L + + A
Sbjct: 386 LGDNKTDKVLECLKKALSSLE----KWEPNHELATAIFSQVEKTGDIEAAEKLLVVFRDA 441
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ E++ ++RTYA A ++ R++ +KV + +++LL
Sbjct: 442 -GYVTTEMYNSVLRTYAEAKLMPLIVDERMEQDKVAMDVETRRLL 485
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 190/346 (54%), Gaps = 2/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+KA + L+KMK+L S + +N +M LY G EK+P +++EMK + ++PD+++Y +
Sbjct: 138 TDKALSHLQKMKDLGFASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQVLPDNFSYRI 197
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + +D G ERV++EM+ + DW T+S A+ Y++AGL A AL++ E R
Sbjct: 198 CINSYGVRSDFGGVERVLKEMETQPNIVMDWNTYSIAANFYIKAGLTRDAVCALRKSEER 257
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++D Y LI+LY Q G +EV RIW + A N + +++ LV L +L A
Sbjct: 258 LDNKDGQGYNHLISLYAQLGLKNEVMRIWDLEKNACKRCINRDFTTLLESLVKLGELDEA 317
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK KEWES YD + +++I Y+++G E A + E + + W I +
Sbjct: 318 EKILKEWESSDNCYDFGIPSIVIIGYSQKGLHEKALAMLEELQNKEKVTTPNCWSIVAGG 377
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+ G+M+ A C + A+ + G W P+++ I +R V+ AE + +L+
Sbjct: 378 YIHKGEMEKAFKCFKTALSLYVENKG-WKPNAKVIAELLRWIGDNGSVEDAEVLVSLLRN 436
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
AV + +++ LI+TY G+ +L R++ + ++ ++ +KK++
Sbjct: 437 AV-PVNRQMYHTLIKTYIRGGKEVDDLLGRMEKDGIDENKETKKII 481
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 169/303 (55%), Gaps = 1/303 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA A MKEL FS++P+N LM LY + G E++P+++ EMK++ I+PD+++Y
Sbjct: 59 LVDKALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYR 118
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + D G E +EEM+ + ++ DW T++ +AS Y++ L EKA AL + E
Sbjct: 119 ICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEA 178
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +D AY+ LI+LYG G+ SE R+W N Y+NM+ VLV L ++
Sbjct: 179 KLDKQDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITE 238
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE KEWES ++D RV NV++ Y ++ L+ AE L + ++G P + +W I +
Sbjct: 239 AEDLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAI 298
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y GD+ A + + A+ + G W+P + +++ E +V E F+ +LK
Sbjct: 299 GYAEKGDVAKAYEMTKNALSVHAPNTG-WIPRPSMLEMILKYLGDEGEVKDVEAFVSLLK 357
Query: 301 KAV 303
AV
Sbjct: 358 AAV 360
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 169/303 (55%), Gaps = 1/303 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA A MKEL FS++P+N LM LY + G E++P+++ EMK++ I+PD+++Y
Sbjct: 163 LVDKALAHFRNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYR 222
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + D G E +EEM+ + ++ DW T++ +AS Y++ L EKA AL + E
Sbjct: 223 ICINSYGTRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEA 282
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +D AY+ LI+LYG G+ SE R+W N Y+NM+ VLV L ++
Sbjct: 283 KLDKQDPDAYRHLISLYGNLGDKSEAKRLWAVQMSNCKRYINRDYMNMLSVLVKLDEITE 342
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE KEWES ++D RV NV++ Y ++ L+ AE L + ++G P + +W I +
Sbjct: 343 AEDLLKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAI 402
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y GD+ A + + A+ + G W+P + +++ E +V E F+ +LK
Sbjct: 403 GYAEKGDVAKAYEMTKNALSVHAPNTG-WIPRPSMLEMILKYLGDEGEVKDVEAFVSLLK 461
Query: 301 KAV 303
AV
Sbjct: 462 AAV 464
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 176/304 (57%), Gaps = 3/304 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EK+ A +KMKEL FS++P+N++M LY G EK+P++I EMK++ I+PD+++Y
Sbjct: 59 LVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYR 118
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + D G E +EEM+ + ++ DW T++ +AS Y++ + EKA ALK+ E
Sbjct: 119 ICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEA 178
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN-TANISYLNMIQVLVNLKDLP 179
+ +D +Y LI+LYG G+ SEV R+W +L+++ N N Y M+ VLV L ++
Sbjct: 179 KINIKDSDSYNHLISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIE 237
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE KEWES +D +V NV++ Y ++ L+ AE L + ++G P + +W I +
Sbjct: 238 EAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVA 297
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y GD A + + A+ + G W+P I +++ E DV+ E F+++L
Sbjct: 298 AGYAEKGDAAKAYELTKNALCVYAPNTG-WIPRPGMIEMILKYLGDEGDVEEVEIFVDLL 356
Query: 300 KKAV 303
K AV
Sbjct: 357 KVAV 360
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 176/304 (57%), Gaps = 3/304 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EK+ A +KMKEL FS++P+N++M LY G EK+P++I EMK++ I+PD+++Y
Sbjct: 180 LVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYR 239
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + D G E +EEM+ + ++ DW T++ +AS Y++ + EKA ALK+ E
Sbjct: 240 ICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEA 299
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN-TANISYLNMIQVLVNLKDLP 179
+ +D +Y LI+LYG G+ SEV R+W +L+++ N N Y M+ VLV L ++
Sbjct: 300 KINIKDSDSYNHLISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIE 358
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE KEWES +D +V NV++ Y ++ L+ AE L + ++G P + +W I +
Sbjct: 359 EAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVA 418
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y GD A + + A+ + G W+P I +++ E DV+ E F+++L
Sbjct: 419 AGYAEKGDAAKAYELTKNALCVYAPNTG-WIPRPGMIEMILKYLGDEGDVEEVEIFVDLL 477
Query: 300 KKAV 303
K AV
Sbjct: 478 KVAV 481
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 176/304 (57%), Gaps = 3/304 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EK+ A +KMKEL FS++P+N++M LY G EK+P++I EMK++ I+PD+++Y
Sbjct: 165 LVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYR 224
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + D G E +EEM+ + ++ DW T++ +AS Y++ + EKA ALK+ E
Sbjct: 225 ICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEA 284
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN-TANISYLNMIQVLVNLKDLP 179
+ +D +Y LI+LYG G+ SEV R+W +L+++ N N Y M+ VLV L ++
Sbjct: 285 KINIKDSDSYNHLISLYGHLGDKSEVNRLW-ALQMSNCNRHINKDYTTMLAVLVKLNEIE 343
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE KEWES +D +V NV++ Y ++ L+ AE L + ++G P + +W I +
Sbjct: 344 EAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVA 403
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y GD A + + A+ + G W+P I +++ E DV+ E F+++L
Sbjct: 404 AGYAEKGDAAKAYELTKNALCVYAPNTG-WIPRPGMIEMILKYLGDEGDVEEVEIFVDLL 462
Query: 300 KKAV 303
K AV
Sbjct: 463 KVAV 466
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 191/330 (57%), Gaps = 7/330 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE+++++MK L + + +N ++ Y +TG+P+KI +++QEM+ + I D + ++
Sbjct: 175 LVEKAESVVQEMKSLGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHS 234
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A+V+DI G E+ + +M+ D V DWT+++ A Y++ GL +KA L++ E
Sbjct: 235 IQLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKALEMLEKSER 294
Query: 121 R-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R +AY LITLY TG +EV RIW L +Y+++I L+ L D
Sbjct: 295 LVTGKRRGTAYDSLITLYAATGKTNEVLRIWE-LYKKNEKVYKEAYISIITSLLKLDDFE 353
Query: 180 GAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
AEK F+EWE + YDI + N +I AY+++G +E AE L +RA +G +PNAKTW
Sbjct: 354 NAEKIFEEWEFQNHSCYDIHIPNFLIDAYSRKGLVEKAETLIDRAISKGGEPNAKTWYHL 413
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+ YL+NG AV+ ++KA+ G W PS+E + + + + E D+ F+++
Sbjct: 414 ATGYLQNGQTLKAVEAMKKAVVVS---GRMWKPSNEILANCLGYLKVEGDLGKLTNFMDL 470
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 328
L+ D + +++ E L+ A +S V+
Sbjct: 471 LRDN-DIISLDIQERLLNHIKNAKSSSDVL 499
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 4/166 (2%)
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + ++ V+ I A+++ + +V +S L + Y +A L EKAE ++E+++
Sbjct: 132 VQLDLISKVHGIEQAQKLFNNTPQHLKVLK---VYSALLNCYAKAKLVEKAESVVQEMKS 188
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
L Y ++ Y QTGN ++ + + + ++ + ++ D+ G
Sbjct: 189 LGFANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHSIQLSAYASVSDIVG 248
Query: 181 AEKCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARR 225
EK + ES + D Y K G ++ A E+ E++ R
Sbjct: 249 IEKTLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKALEMLEKSER 294
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 182/327 (55%), Gaps = 14/327 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAEA ++KM+E++ SS P+N L+ LY++TG+ KI A+IQEM+ +I D++T
Sbjct: 126 VEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXN 185
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A A +DIS E+ + M+ D ++ DW +S AS Y++ GL +KA LK++E+
Sbjct: 186 LMVAYVAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESN 245
Query: 122 NAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H + SA++ L++LY +T + E+YR+W + ++ +Y MI L L D+ G
Sbjct: 246 RPHLERXSAFKXLLSLYARTXHKQELYRVWNLYKPSYEYPE--AYSCMITCLTKLDDIEG 303
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK F+EWE C YD RV N ++ AY K + AE L + P A TW I +
Sbjct: 304 AEKIFQEWECECTMYDFRVLNRLLSAYCKRCLFDKAESLVNKVIEERM-PYASTWNILAK 362
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ + M AV+ L+KAI GR W P+S + + + E + +++ E + K
Sbjct: 363 GYVEDKQMPKAVEMLKKAISVGRKG---WRPNSIILDACIEYLEGQGNLEEIEEIARLCK 419
Query: 301 KAVDDLGV---EVFEPLIRTYAAAGRT 324
+LG+ ++ L+RT AA ++
Sbjct: 420 ----NLGIPDGDIHHRLLRTSAAGEKS 442
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 95 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
+ L S YV EKAE ++++ + Y LI LY QTGN ++ + + ++
Sbjct: 113 YGALLSGYVREKSVEKAEATMQKMREMDFATSSFPYNMLINLYSQTGNHGKIEALIQEMQ 172
Query: 155 L-AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA-TYDIRVTNVMIGAYAKEGR 212
A P A + N++ V D+ EK E + D + +V Y K G
Sbjct: 173 XKAIPCDA-FTVXNLMVAYVAASDISAMEKXLNRMEEDPHISVDWNIYSVAASGYLKVGL 231
Query: 213 LENAEEL 219
++ A E+
Sbjct: 232 IDKALEM 238
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 166/303 (54%), Gaps = 1/303 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA A + MKEL FS++ +N+LM LY G E++P ++ EMK I+PD+++Y
Sbjct: 161 LVDKALAHFQNMKELGFVFSALSYNNLMGLYTNIGQHERVPMVMAEMKRDGIVPDNFSYR 220
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + D G E +EEM+ + ++ DW T++ +AS Y++ L EKA AL++ E
Sbjct: 221 ICINSYGIRADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGYLREKAYSALRKAEA 280
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +D AY LI+LYG G+ EV R+W L N Y NM+ VLV L ++
Sbjct: 281 KMDKKDGDAYGHLISLYGHLGDKLEVKRLWALHMLNCKRYINKDYTNMLAVLVKLDEITE 340
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE KEWES +D +V NV++ Y ++G L+ AE L + ++G P + +W I +
Sbjct: 341 AEDLLKEWESSKNAFDFQVPNVLLTGYRQKGLLDKAETLLDGFLKKGKTPTSTSWWIVAI 400
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y GD+ A + + A+ + G W+P I +++ E +V E F+ +LK
Sbjct: 401 GYAEKGDVAKAYELTKNALSVFAPNSG-WIPRPSIIEMILKYLGNEGEVKDVEAFVNLLK 459
Query: 301 KAV 303
AV
Sbjct: 460 VAV 462
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 143/244 (58%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKAEA + K+++ L + +N +M LY T EK+P +I++MK + I + +YN+
Sbjct: 177 TEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLSYNL 236
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
WM A + + + E V EEM D V W+T LA++Y++ GL EKA ALKE E +
Sbjct: 237 WMNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAFAALKEAEKK 296
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y FLITLY + V+R+WR+ + N +Y+ ++ LV L ++ A
Sbjct: 297 LSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDKA 356
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK FKEWE C YDIRV+NV++GAY + G LE AE L RG +PN KTWEI +
Sbjct: 357 EKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNPNYKTWEILMEG 416
Query: 242 YLRN 245
++R+
Sbjct: 417 WVRS 420
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKA A L++ ++ + + L+TLYA E + + + KA S P Y
Sbjct: 282 LVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYI 341
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + +I AE+V +E + + R D + L YV GL EKAE +
Sbjct: 342 CILLCLVKLGEIDKAEKVFKEWELNCR-NYDIRVSNVLLGAYVRNGLLEKAESLHRHTLG 400
Query: 121 RNAHRDLSAYQFLI 134
R + + ++ L+
Sbjct: 401 RGGNPNYKTWEILM 414
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 16/300 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE+LLE M+ S+PFN +MTL +K+ ++ EMK +I D YTYN+W
Sbjct: 362 EKAESLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNIQLDIYTYNIW 421
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + I E+V E+M +D + +W+TFS +A++Y++ LFEKA+ LK+ E R
Sbjct: 422 LSSCGSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKMELFEKAQECLKKAEGRI 481
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + +L++LYG GN EVYR+W + + FP+ N+ Y +I V + D+ AE
Sbjct: 482 LGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISSFVRMDDIERAE 541
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K ++EW S + D R+ N++I Y K+G+ + + G PN+ TWE+ S+ +
Sbjct: 542 KLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEGGGCPNSTTWELLSEGH 601
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ + A+ CLEKA T D W P + + AE +E+L+K+
Sbjct: 602 IAEKRVSEALSCLEKAFMT--SDSKSWKPKANK--------------NCAEVLIELLRKS 645
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 165/303 (54%), Gaps = 1/303 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + A +KMKEL FSS+P+N+LM LY G EK+P++I EMK S IMPD+++Y
Sbjct: 174 MVDGSLAHFQKMKELGFVFSSLPYNNLMGLYTNIGQHEKVPSVIAEMKGSGIMPDNFSYR 233
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + D G E +E+M+ + ++ DW T++ +AS Y++ L EKA ALK+ E
Sbjct: 234 ICINSYGTRADFFGMENTLEDMECEPQIVVDWNTYAVVASNYIKGNLREKAISALKKAEA 293
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +D Y LI+LYGQ G+ SE+ R+W N Y M+ +LV L ++
Sbjct: 294 KIDIKDSDTYNHLISLYGQLGDKSEMRRLWGLQMSNCKRHINKDYTTMLAMLVRLDEIEE 353
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE KEWES +D V NV++ Y + L+ AE L + ++G P + +W I +
Sbjct: 354 AEALLKEWESSENAFDFHVPNVLLTGYRHKDMLDKAEALLDDFLKKGKMPPSTSWAIVAI 413
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y GD A + ++ A+ G W+P I +++ E D+ E F+++L+
Sbjct: 414 GYAEKGDCAKAYELIKNALCVYVPRSG-WIPRPAMIEMILKYLGDEGDLKDVETFVQLLQ 472
Query: 301 KAV 303
A+
Sbjct: 473 AAM 475
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 193/347 (55%), Gaps = 8/347 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAEA++++M+++ + +S +N L+ LYA+ G +KI +I+EMK I D Y+
Sbjct: 154 EKAEAIMQEMRKMGIATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNL 213
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
A A DISG E++++ ++ D + ADWT +S A+ Y+ AGL +A LK+ E +
Sbjct: 214 CAAYVAKADISGMEKILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKV 273
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + A++FL++LY +TG+ +EVYR+W + + T + Y MI L L D+ GA
Sbjct: 274 RPNTNKFAFKFLLSLYERTGHKNEVYRVWNTFKPLTKETC-VPYALMITSLAKLDDIEGA 332
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F+EWES C YD RV N ++ AY ++G L+ AE + +A P TW I +
Sbjct: 333 ERIFQEWESKCTVYDFRVLNRLLVAYCRKGLLDKAESVVNQAVVERT-PFRSTWSILATG 391
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVP-SSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y G M AV+ L+KAI GR + W P + + + + E++ D + + + + K
Sbjct: 392 YAEYGHMSKAVEMLKKAILVGRQN---WKPKQGDILEACLDYLEKQGDAETMDEIVRLCK 448
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + E++ L+RT A G+ +L ++KM+ E K+L
Sbjct: 449 SS-GTVMKEMYYRLLRTSIAGGKPVISILEQMKMDGFAADEEVDKIL 494
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 143/244 (58%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKAEA + K+++ L + +N +M LY T EK+P +I++MK + I + +YN+
Sbjct: 177 TEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNLIPRNVLSYNL 236
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
WM A + + + E V EEM D V W+T LA++Y++ GL EKA ALKE E +
Sbjct: 237 WMNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAFAALKEAEKK 296
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y FLITLY + V+R+WR+ + N +Y+ ++ LV L ++ A
Sbjct: 297 LSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEIDKA 356
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK FKEWE C YDIRV+NV++GAY + G LE AE L RG +PN KTWEI +
Sbjct: 357 EKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNPNYKTWEILMEG 416
Query: 242 YLRN 245
++R+
Sbjct: 417 WVRS 420
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKA A L++ ++ + + L+TLYA E + + + KA S P Y
Sbjct: 282 LVEKAFAALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYI 341
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + +I AE+V +E + + R D + L YV GL EKAE +
Sbjct: 342 CILLCLVKLGEIDKAEKVFKEWELNCR-NYDIRVSNVLLGAYVRNGLLEKAESLHRHTLG 400
Query: 121 RNAHRDLSAYQFLI 134
R + + ++ L+
Sbjct: 401 RGGNPNYKTWEILM 414
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 169/303 (55%), Gaps = 1/303 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +K+ A +KMKEL FSS+P+N+LM LY G EK+P++I EMK++ I+PD+++Y
Sbjct: 174 LVDKSLAHFQKMKELGFVFSSLPYNNLMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYR 233
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A D G E +EEM+ + ++ DW T++ LA+ Y++ L +KA AL++ E
Sbjct: 234 ICINSYGARADFFGMENTLEEMECEPQIVVDWNTYAVLANNYIKGNLRDKAISALQKAEA 293
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +D Y L++LYGQ G+ SEV R+W N Y M+ +L+ L ++
Sbjct: 294 KIDIKDSDTYNHLMSLYGQLGDKSEVKRLWALQMSNCKRHINKDYTTMLAMLLKLDEIEE 353
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE KEWES +D V NV++ Y ++ L+ AE L + ++G P + +W I +
Sbjct: 354 AEALLKEWESSENAFDFHVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPTSTSWAIVAI 413
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y GD+ A + + A+ + G W+P I +++ E ++ E F+ +L+
Sbjct: 414 GYAEKGDVAKAYELTKNALCVYAPNSG-WIPRPAMIEMILKYLGDECNLKDVETFVHLLQ 472
Query: 301 KAV 303
AV
Sbjct: 473 AAV 475
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 174/323 (53%), Gaps = 3/323 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EK+ + ++KMKEL +++ +N LM LY TG EK+P ++ +MK + I PD ++Y
Sbjct: 116 LVEKSLSHVQKMKELGFFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYR 175
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ +++ +D E+++ EM+ ++ DW TF+ +A+IY+EAGL EKA LK+ E
Sbjct: 176 ICLKSYGERSDFDNVEKILREMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCEE 235
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +++ Y LI+LY GN E+ R+W + N Y+ ++ LV L L
Sbjct: 236 K-VNKNALGYNHLISLYASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEE 294
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK ++WES C YD RV NV++ Y+++G E AE + + + N +W I S
Sbjct: 295 AEKLLQDWESSCQYYDFRVPNVVLIGYSRKGLPEKAEAMLQDIIEKQKMKNPSSWSIISA 354
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ +M+ A +C+++A+ + G W P I + +D E F+ +L+
Sbjct: 355 GYMDKQNMEKAFECMKEALAAETENNG-WRPKPAMISNILNWLGDNRDAQEVEAFVGLLE 413
Query: 301 KAVDDLGVEVFEPLIRTYAAAGR 323
V E++ LI++Y G+
Sbjct: 414 TKVPK-SREMYHALIKSYIRCGK 435
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 184/346 (53%), Gaps = 2/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+++ + +KMKE+ L S + +N +M LY G EK+ ++ EMK + I PD+++Y +
Sbjct: 131 TDRSISHWQKMKEMGLASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISPDNFSYRI 190
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A +DI G E+V+ EM+ A DW T++ +A+ Y++AGL +KA AL++ E +
Sbjct: 191 CINSYGARSDIQGMEKVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKAVDALRKSEEK 250
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+D Y LI+LY G SEV RIW + N ++ M++ LV L DL A
Sbjct: 251 LDKKDGIGYNHLISLYATLGIKSEVLRIWDLQKSVCKRRINRDFVTMLESLVKLGDLEEA 310
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK KEWES YD+R+ N+++ Y+K G E AE E +G +W + +
Sbjct: 311 EKVLKEWESSGNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTPNSWAMIASG 370
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
YL G+ A +C++ A G W P+ + + E + E F+ L
Sbjct: 371 YLEKGEKAKAFECMKAAFSLNVEKKG-WKPNPRVVMDILIWLGDEGSPEDVEAFVASLSV 429
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
A+ L +++ L++ +GR + +L R+K +K++ E +K++L
Sbjct: 430 AI-PLNRQIYHALLKAKIRSGRDAHEILDRMKTDKIDEDEETKEIL 474
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 181/302 (59%), Gaps = 10/302 (3%)
Query: 3 EKAEALLEKMKELNLGF-SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAEA++++M+ ++GF ++ +N ++ LY++ G EK+ ++QEM+ + I DS+TY +
Sbjct: 153 EKAEAIMQEMR--DMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCI 210
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A +D+ G E+++ +++ D V +DW + A+ Y++A L EKA LK+ E
Sbjct: 211 RLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQF 270
Query: 122 NAHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ R Y+ L+TLY GN +EVYRIW +L N Y+ M+ L+ L D+ G
Sbjct: 271 ISGRSRRFGYEILLTLYATMGNKTEVYRIW-NLYKTIGKFFNTGYVAMVSSLLKLDDMDG 329
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK F+EW SG +D RV N++I AY K+G LE AE+L RA +G +P A TW+ +
Sbjct: 330 AEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAA 389
Query: 241 YYLRNGDMKLAVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y N M+ AVD L+KA + T +G W P+ T+ + + + + DV+ AE + +L
Sbjct: 390 GYHENNQMEKAVDTLKKALLATSQG----WKPNPVTLSACLEYLKGKGDVEEAENLIRLL 445
Query: 300 KK 301
++
Sbjct: 446 RE 447
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 197/349 (56%), Gaps = 10/349 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAE L E M+ + + +S +N++M LY++ G E++ ++ + M+ I+PD +T +
Sbjct: 167 VEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDN 225
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V D+ E+V+E+ + ++ W +F+ + ++++AG+ E+A +A +E E R
Sbjct: 226 LVSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQAFQESEKR 283
Query: 122 -NAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA-NISYLNMIQVLVNLKDL 178
A +D AY FL+T+Y SEV RIW R P +A N Y+ I VL+ + D+
Sbjct: 284 ITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDI 343
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
GAEK ++EWES +D R+ N+++ AY KEG +E AE L ++ ++G P + TW
Sbjct: 344 VGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTPFSNTWYKL 403
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+ Y + G A D +KA+ + +W P + + +F ++K+V+ AE +
Sbjct: 404 AGGYFKVGQASKAADLTKKALASA---SNEWKPDLANVLMSINYFAEQKNVEAAEEMASL 460
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
L++ V L +V+ L++TY AG + +L R+K + +E E + K+L
Sbjct: 461 LQRLV-PLTRDVYHGLLKTYVNAGEPASDLLDRMKKDGIEADEETDKIL 508
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 170/303 (56%), Gaps = 11/303 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+++KM+E+ + + +N+++ LYA G EK+ +++EM+ I PD +TYN+
Sbjct: 154 KKAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIR 213
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A AA +DI+ E+++ +M+ D VA DW T+ + + Y +AGL E + LK+ E
Sbjct: 214 MNAYAAASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFI 273
Query: 123 AHRD-LSAYQFLITLYGQTGNLSEVYRIWR---SLRLAFPNTANISYLNMIQVLVNLKDL 178
+ AYQ+L+TLY GN EVYR+W +LR F N YL +I L+ L D+
Sbjct: 274 GDKQKWLAYQYLMTLYAAIGNKDEVYRVWNLYTNLRKRF----NSGYLCIISSLMKLDDI 329
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
GAE+ KEWESG ++D R+ N+MI +Y +G ++ AE R G +P A TW++
Sbjct: 330 DGAERILKEWESGDTSFDFRIPNMMINSYCMKGFVDKAEAYINRLIETGKEPEANTWDLL 389
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+ Y NG + L+KAI W P + + + + ++VD AE + +
Sbjct: 390 ASGYHSNGLTNKVAETLKKAISVS---PPHWKPKYHILAACLEYLKTNENVDLAEEIIGL 446
Query: 299 LKK 301
L K
Sbjct: 447 LCK 449
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 183/346 (52%), Gaps = 2/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+K+ L+KMKE+ SS+ +N +M LY G EK+P ++ EMK ++++PD+++Y +
Sbjct: 146 TDKSILHLQKMKEMGFAKSSLTYNDIMCLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRL 205
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A +D+ G E+++ EM+ + DW T++ A+ Y+ L +KA LK+ E R
Sbjct: 206 CINSFGARDDLEGMEKILNEMEHQPDIVMDWNTYAVAANFYIIGDLTDKAIDTLKKSEAR 265
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+D + Y LI+LY + GN +EV R+W + A N Y+ M++ L+ L + A
Sbjct: 266 LDKKDGTGYNHLISLYAKLGNKTEVLRLWDLEKSACERHINKDYIIMMESLLKLSEFEEA 325
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK KEWES YD+RV N +I Y+++G E A+ L E +G +W I +
Sbjct: 326 EKMLKEWESSGNFYDVRVPNTLIIGYSRKGLCEKAKALLENLTEKGKMTLPNSWGIVAAG 385
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ ++ A C++ A+ + G W P+ I + E + AE F+ LK
Sbjct: 386 FFDKSEVAKAFSCMKAALCLYVENKG-WKPNQRVINGILSWLGDEGSAEDAEAFVSSLKT 444
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + E++ +++ AG+ +L +K ++ E +KK+L
Sbjct: 445 VI-PVNREMYHAVLKANIRAGKEVHRLLDGMKTYNIKEDEETKKIL 489
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 180/302 (59%), Gaps = 10/302 (3%)
Query: 3 EKAEALLEKMKELNLGF-SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAEA++++M+ ++GF ++ +N ++ LY++ G EK+ ++QEM+ + I DS+TY +
Sbjct: 153 EKAEAIMQEMR--DMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCI 210
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A +D+ G E+++ +++ D V +DW + A+ Y++A L EKA LK+ E
Sbjct: 211 RLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQF 270
Query: 122 NAHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ R Y+ L+TLY GN +E YRIW +L N Y+ M+ L+ L D+ G
Sbjct: 271 ISGRSRRFGYEILLTLYATMGNKTEXYRIW-NLYKTIGKFFNTGYVAMVSSLLKLDDMDG 329
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK F+EW SG +D RV N++I AY K+G LE AE+L RA +G +P A TW+ +
Sbjct: 330 AEKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAA 389
Query: 241 YYLRNGDMKLAVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y N M+ AVD L+KA + T +G W P+ T+ + + + + DV+ AE + +L
Sbjct: 390 GYHENNQMEKAVDTLKKALLATSQG----WKPNPVTLSACLEYLKGKXDVEEAENLIRLL 445
Query: 300 KK 301
++
Sbjct: 446 RE 447
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 170/298 (57%), Gaps = 6/298 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEA++E+M+ + S P+N L+ LY K G EKI +IQEM+ + ++ +YT + M
Sbjct: 127 KAEAIMEEMRAKGMANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLM 186
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
A A ++ISG ER++ ++++D ++ DW +S AS Y++ GL EKA L++LE+
Sbjct: 187 AAYVAASNISGMERILNQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLEDVMP 246
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ SA+ L+TLYG+TG E+Y +W + + S + MI L L D+ GAE
Sbjct: 247 LEKKTSAFDILVTLYGKTGKRDELYLVWNTYK-PLIELKETSVMTMISSLSKLDDIKGAE 305
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F+EWES C YD RV N ++ AY ++G L+ AE + P A +W I + Y
Sbjct: 306 KIFREWESQCMMYDFRVLNTLLFAYCRKGLLKKAEA-AVEKAAKDRTPCASSWGILAMGY 364
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ + M AV+ L+KA+ G W P+S T+ + E++ DV+G E ++LK
Sbjct: 365 IEHNQMYKAVEMLKKALSIS---GQGWRPNSMTLTACLNFLEKQGDVEGVEEVTKLLK 419
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 181/346 (52%), Gaps = 2/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+K+ + L+KMKE+ SS+ +N +M LY G EK+P ++ EMK +++ PD+++Y +
Sbjct: 146 TDKSISHLQKMKEMGFAKSSLSYNDIMCLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRL 205
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M + A D+ G E+++ EM+ + DW +++ AS Y++ GL +KA +LK+ E R
Sbjct: 206 CMNSYGARGDLEGMEKMLNEMEHQPDIVVDWNSYAVAASSYIKGGLTDKAIDSLKKSETR 265
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+D + Y LI+LY G +EV R+W + N Y+N++ LV L +
Sbjct: 266 LDKKDGTGYNHLISLYATLGEKTEVLRLWDLEKSTCERPINKDYINIMASLVKLDEFEEV 325
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK KEWE+ YD+RV N +I Y+ +G E A+ L E +G W +
Sbjct: 326 EKVLKEWEASGNFYDVRVPNTLIIGYSGKGLYEKAKALLENLTEKGKATLPNIWGKVAAG 385
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ ++ A C++ A+ + +W P+ + I + E + AE F+ LK
Sbjct: 386 FFDKNEVAKAFSCMKAALCLYE-ENKEWKPNQKVITGILSWLGDEGSAEDAEAFVSSLKN 444
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + E++ +++ + AG+ +L +K K++ E +KK+L
Sbjct: 445 VI-PMNREMYHAVLKAHIRAGKEVHGLLDGMKTCKIKEDEETKKIL 489
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 197/349 (56%), Gaps = 10/349 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAE L E M+ + + +S +N++M LY++ G E++ ++ + M+ I+PD +T +
Sbjct: 167 VEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDN 225
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V D+ E+V+E+ + ++ W +F+ + ++++AG+ E+A +A +E E R
Sbjct: 226 LVSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQAFQESEKR 283
Query: 122 -NAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA-NISYLNMIQVLVNLKDL 178
A +D AY FL+T+Y SEV RIW R P +A N Y+ I VL+ + D+
Sbjct: 284 ITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDI 343
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
GAEK ++EWES +D R+ N+++ AY KEG +E AE L ++ ++G + TW
Sbjct: 344 VGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYKL 403
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+ Y + G + A D +KA+ + +W P + + +F ++K+V+ AE +
Sbjct: 404 AGGYFKVGQVSKAADLTKKALASA---SNEWKPDLANVLMSINYFAEQKNVEAAEEMASL 460
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
L++ V L +V+ L++TY AG + +L R+K + +E E + K+L
Sbjct: 461 LQRLV-PLTRDVYHGLLKTYVNAGEPASDLLDRMKKDGIEADEETDKIL 508
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 197/349 (56%), Gaps = 10/349 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAE L E M+ + + +S +N++M LY++ G E++ ++ + M+ I+PD +T +
Sbjct: 129 VEKAEELFENMRGMGMA-NSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDN 187
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V D+ E+V+E+ + ++ W +F+ + ++++AG+ E+A +A +E E R
Sbjct: 188 LVSAYADVEDVEAIEKVLEKASCNNLMS--WHSFAIVGKVFMKAGMQERALQAFQESEKR 245
Query: 122 -NAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA-NISYLNMIQVLVNLKDL 178
A +D AY FL+T+Y SEV RIW R P +A N Y+ I VL+ + D+
Sbjct: 246 ITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDI 305
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
GAEK ++EWES +D R+ N+++ AY KEG +E AE L ++ ++G + TW
Sbjct: 306 VGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYKL 365
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+ Y + G + A D +KA+ + + W P + + +F ++K+V+ AE +
Sbjct: 366 AGGYFKVGQVSKAADLTKKALASASNE---WKPDLANVLMSINYFAEQKNVEAAEEMASL 422
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
L++ V L +V+ L++TY AG + +L R+K + +E E + K+L
Sbjct: 423 LQRLV-PLTRDVYHGLLKTYVNAGEPASDLLDRMKKDGIEADEETDKIL 470
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 176/326 (53%), Gaps = 4/326 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE+ + ++ + L FN +M LY T EK+ ++I MK ++I ++ +YN+
Sbjct: 164 VQKAESFMASLQSIGLPVDPHSFNEMMKLYVATCEYEKVFSVIDLMKRNNIPRNALSYNL 223
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
WM A +V+D++ + V +EM DG + W+T+ LA+I+++ GL KA L+ E +
Sbjct: 224 WMNA-CSVSDVTSVQSVFKEMVNDGTIEVGWSTYCTLANIFMKHGLNSKAFACLRTAETK 282
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y F++T Y G+ V R+W + + + +Y++ I L+ + D+ A
Sbjct: 283 LSTAQRLGYSFVMTCYAALGDSDGVMRLWEASKCVPGRIPSANYMSAILCLIKVGDIDRA 342
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F WE C +D+RV+NV++GAY + G +E AE+L +G PN KTWEI +
Sbjct: 343 EWIFGSWEVECRKHDVRVSNVLLGAYVRNGWIEKAEKLHLHMLEKGGRPNYKTWEILMEG 402
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
++++ M AV+ ++KA+ + G W P + FE++ + D A ++++L+K
Sbjct: 403 FVQSRQMDKAVNAMKKALSLMK--GCHWRPPLRLVEAIATFFEEQGNTDDANRYIKVLQK 460
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPV 327
+ + +++ ++R Y A P
Sbjct: 461 -FNLTSLPLYKSVLRAYIKADTMLPT 485
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 183/344 (53%), Gaps = 9/344 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++ E +EK+ L + PFN +M LY +G EK+ ++ MK + I + +YN
Sbjct: 155 MVKEGEVFMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVLSYN 214
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+WM A V+ ++ E V EM D V W++ LA++Y++ G EKA+ L+ E
Sbjct: 215 LWMNACCQVSGVTAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGFDEKAKLVLENAEK 274
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y FLITLY G+ V R+W + +L + +Y+ ++ LV + DL
Sbjct: 275 LLNRSNRLGYFFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKIGDLEE 334
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F EWE+ C YD+RV+NV++GAY + G + AE L R RG +PN KTWEI +
Sbjct: 335 AERVFNEWEAQCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNPNYKTWEILME 394
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+++ M+ A+ + +A + + G W PS + ++FE+E+ ++ A ++
Sbjct: 395 GWVKCQSMEKAIVAMHRAFELMK--GCHWRPSESIVMAIAKYFEEEEKIEEANTYI---- 448
Query: 301 KAVDDLGVE---VFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 341
+ + LG+ ++ L+R A R + + +K++K+ + E
Sbjct: 449 RDLHHLGLASLPLYRLLLRMQEHAQRPAFDIYEMMKLDKIGIDE 492
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 162/294 (55%), Gaps = 5/294 (1%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++KM+E+ + + +N+++ LYA G EK+ +++EM+ I PD +TYN+ M A AA
Sbjct: 1 MQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAA 60
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD-L 127
+DI+ E+++ +M+ D VA DW T+ + + Y +AGL E + LK+ E +
Sbjct: 61 ASDITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKW 120
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
AYQ+L+TLY GN EVYR+W +L N YL +I L+ L D+ GAE+ KE
Sbjct: 121 LAYQYLMTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKE 179
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
WESG ++D R+ N+MI +Y +G ++ AE R G +P A TW++ + Y NG
Sbjct: 180 WESGDTSFDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGL 239
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ L+KAI W P + + + + ++VD AE + +L K
Sbjct: 240 TNKVAETLKKAISVSP---PHWKPKYHILAACLEYLKTNENVDLAEEIIGLLCK 290
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 192/348 (55%), Gaps = 8/348 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAE L EKM+ + + SS +N +M LY + G E++ ++ + M+ S I+ D +T +
Sbjct: 199 VEKAEELFEKMRGMGMA-SSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDT 257
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A DI E+V+E+ + W +++ + + +++G+ E+A +A +E E +
Sbjct: 258 LVAAYVVAEDIEAIEKVLEKADTCNDLMT-WHSYATIGKVLMQSGMEERALQAFQESEKK 316
Query: 122 NAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA-NISYLNMIQVLVNLKDLP 179
A + + AY FL+T+Y G SEV RIW + P +A N Y+ I VL+ + D+
Sbjct: 317 IAKKSNRVAYGFLLTMYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIV 376
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
GAEK ++EWES +D R+ N+++ AY KEG +E AE L ++ ++G P TW +
Sbjct: 377 GAEKAYEEWESKHVYHDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLA 436
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y + G A D +KA+ +G +W P + + +F ++K+V+ AE +L
Sbjct: 437 GGYFKVGQASKAADLTKKALASG---SNEWTPDLTNVLMSLNYFAEQKNVEAAEEMASLL 493
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
++ + +++ L++TY AG+ +L R+K + +E E ++K+L
Sbjct: 494 QRLITPTR-DIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADEETEKIL 540
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 178/346 (51%), Gaps = 3/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + +++ L FN +M LY T EK ++I MK ++I + +YN+
Sbjct: 173 VQKAETFMAQLQSCGLPVDPHSFNEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNL 232
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
WM A V+ ++ + V +EM D V W+T+ LA+I+ + GL KA+ L++ E +
Sbjct: 233 WMNVCAEVSGVAPVQSVFQEMLNDETVEVGWSTYCTLANIFRKNGLNTKAQACLRKAETK 292
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y F++T Y + V R+W + + +Y+ + + + D+ A
Sbjct: 293 LSPTGRLGYSFVMTCYAALNDSDGVMRLWEASKSVPGRIPAANYMTAMLCSIKVGDISQA 352
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F WE+GC +D+RV+NV++GAY + +E AE L +GA PN KTWEI +
Sbjct: 353 EWIFGSWEAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGARPNYKTWEILMEG 412
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+++ M AV C++K + + W P E + +HFE++ D A ++++L++
Sbjct: 413 YVQSRQMDKAVGCMKKGLSLLK--SCHWRPPLELMEAIGKHFEEQGSADDAYRYIKVLQR 470
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + +++ LIR Y A P +L + +++ E +L+
Sbjct: 471 -FNLTSLPLYKSLIRAYINADIVPPNILEMIAKDQIVTDEEMDRLI 515
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 179/346 (51%), Gaps = 3/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + +++ L FN +M LY T EK+ ++I MK ++I + +YN+
Sbjct: 171 VQKAETFMAQLQSHGLPVDPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNL 230
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
WM A A V+ + + V + M D V W+T+ LA+I+ + GL +A+ L + E +
Sbjct: 231 WMNACAEVSGVDSVQSVFQVMLNDETVKVGWSTYCTLANIFRKNGLNNEAQACLVKAEAK 290
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y F++T Y + V R+W + + Y+ + + + D+ A
Sbjct: 291 LSPAGRLGYSFVMTCYAALNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQA 350
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F +WE+GC +D+RV+NV++GAY + +E AE L +GA PN KTWEI +
Sbjct: 351 ECIFGKWEAGCRKHDVRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEG 410
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+++ M AV C++K + + W P E + +HFE++ D A ++++L++
Sbjct: 411 YVQSRQMDKAVGCMKKGLSLLK--SCHWRPPVELMEAIGKHFEEQGSADDAYRYIKVLQR 468
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + +++ LIR Y A P +L + +++++ E +L+
Sbjct: 469 -FNLTSLPLYKSLIRAYINADVVPPNVLEMIAKDQIDMDEEMDRLI 513
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 188/352 (53%), Gaps = 10/352 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+AE +M+E+ + SS P+N +M LY +TG EK+ + + M+ S I PD +T ++
Sbjct: 153 VEEAEKFFGEMQEMGM-MSSYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDI 211
Query: 62 WMRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A D+ G E V+E+ K R+ V W +++ +AS +++AGL KA +AL+E E
Sbjct: 212 LLTVYKASGDLEGIEEVLEKAKPRENLVG--WHSYAIVASAFMKAGLQGKALQALQESEK 269
Query: 121 R-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R + AY FL+++ +G SEV RIW + P T N Y+ I L+ + D
Sbjct: 270 RIDPKNGRVAYGFLLSMCADSGMRSEVDRIWDVYKSKVP-TCNSMYMCRISALLKMNDTD 328
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AEK F+EWES +D R+ N+++ Y EG +E AE L + A +G P A TW +
Sbjct: 329 EAEKAFREWESRFVHHDFRLINLLLNGYCAEGLMEKAEALVDEAITKGRMPYANTWYKLA 388
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ ++G + AVD KA+ + W P + + HF ++K+V+ AE +L
Sbjct: 389 AGFFKDGQVLKAVDLTRKALASATSG---WEPDLTNVLMSLDHFMEQKNVEAAEEMASLL 445
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
+ V L +V+ L++TY AG +L R+ + E + + ++L +C
Sbjct: 446 RSLV-PLTRDVYHSLLKTYVHAGMPVSDLLDRMNEDGFEADQETDRILARLC 496
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 162/282 (57%), Gaps = 8/282 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA++++M+E + SS P+N L+ LY++TG +KIP +++EM+ + I D YT
Sbjct: 61 QKAEAVMQEMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNL 120
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A +DISG ER+++ M+ + + DW ++ A Y++ G E A L++LE
Sbjct: 121 IAASVAASDISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETALTMLEKLEKWM 180
Query: 123 AHRDLSA-YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
A R A + FL++LY +TGN E+YRIW +L + + SY MI L L D+ GA
Sbjct: 181 AFRKKKAVFNFLLSLYAKTGNKDELYRIW-NLYKPSSESMDTSYCCMIDSLTKLDDIEGA 239
Query: 182 EKCFKEWESGC-ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
EK F+EWES C TYD RV N ++ AY G E AE E+A +G P A TW + +
Sbjct: 240 EKIFEEWESQCTTTYDFRVLNGLLVAYCNRGLFEKAEAAIEKA-VQGRTPYASTWHVMAK 298
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
Y+ + + V+ L++A++ GR W P + T + +
Sbjct: 299 GYMEHDQIPKTVEMLKRAVNVGR----DWKPDPILVNTCLEN 336
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 174/347 (50%), Gaps = 3/347 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EK+ EKMKE+ SS+ +N++M LY G EK+P +++EMK ++ PD+Y+Y +
Sbjct: 142 VEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRI 201
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A+ D+ + +M+R + DW T++ A Y++ G ++A LK ENR
Sbjct: 202 CINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENR 261
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+D Y LITLY + G EV R+W + N YL ++Q LV + L A
Sbjct: 262 LEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEA 321
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ EW+S YD RV N +I Y + E AE + E RRG ++WE+ +
Sbjct: 322 EEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATA 381
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y G ++ A C++ A+ G KW P + + + E + E F+ L+
Sbjct: 382 YAEKGTLENAFKCMKTALGVEVG-SRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRN 440
Query: 302 AVDDLGVEVFEPLIRT-YAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + +++ L++ GR +L+R+K +K+E+ E + +L
Sbjct: 441 CI-GVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVIL 486
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 168/300 (56%), Gaps = 5/300 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+++KM+E+ + + +N+++ LYA+ G EK+ +++EM+ I + +TYNV
Sbjct: 154 KKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVR 213
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A AA +DI+ E+++ +M+ D VA DW + + + Y +AGL E + LK+ E
Sbjct: 214 MNAYAAASDITNMEKLLSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISMLKKAEQLI 273
Query: 123 AHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ AYQ+L+TLY GN EVYR+W +L N YL +I L+ L D+ GA
Sbjct: 274 GDKQKWLAYQYLMTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGA 332
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ KEWESG ++D ++ N+MI +Y +G ++ AE R G +P A W+ +
Sbjct: 333 ERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASG 392
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y NG A + L+KAI +W P+ + + + + + +V+ AE + +L K
Sbjct: 393 YHSNGLTNKAAETLKKAISVS---PPRWKPNYDILAACLEYLKTNGNVELAEEIIGLLCK 449
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 174/315 (55%), Gaps = 8/315 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAEA++++M+EL + F ++ LY KTG+ EK+ +++EM+ + I D + Y +
Sbjct: 163 VEKAEAVMQRMRELGFARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCI 222
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + AA +D G E+ ++ ++ D V DW T++ +A+ Y + GL +KA LK E
Sbjct: 223 RLSSYAAASDSEGLEKTLKRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERL 282
Query: 122 -NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R + Y +L+T Y TG +V R+W + N NIS +I L+ DL
Sbjct: 283 ITGERRSTPYDYLMTQYATTGTKEDVLRVWELHKRYVGNRKNIS---VITSLLKFDDLES 339
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK F+EWES DI + N ++ AY+++G LE AE L +R G PNA TW + +
Sbjct: 340 AEKIFEEWESQKLCDDIIIPNFLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAK 399
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL++ AV+ +++ I G + PS+ + ++H + D+D AEGF+ +L+
Sbjct: 400 GYLQHNQTPKAVEAMKEMIVLS---GPRSRPSTVSWVACLQHLKDSGDMDNAEGFINLLR 456
Query: 301 KAVDDLGVEVFEPLI 315
+ D + +++ + L+
Sbjct: 457 EK-DIISLDIQDKLL 470
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 182/347 (52%), Gaps = 5/347 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE+ + ++ + L FN ++ LY T EK A+I MK S+I + +YN+
Sbjct: 159 VQKAESFMASLQSIGLPVDPHSFNEMLKLYVATCQFEKALAVIDLMKRSNIPRNVLSYNL 218
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
WM A + + ++ + V +EM DG V W+TF LA+I+++ GL KA L+ E +
Sbjct: 219 WMNACSVLG-VASVQSVFKEMVNDGTVEVGWSTFCTLANIFIKHGLNSKALACLRTAETK 277
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ R Y F++T Y + + V R+W + + + +Y++ I + + D+ A
Sbjct: 278 LSPRQRLGYSFVMTCYARLDDSDGVMRLWEASKSVPGRIPSANYMSTIICSIKVGDIAQA 337
Query: 182 EKCFKEWESGCA-TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E F WE+ C D+RV+NV++GAY + G +E AE L +GA PN KTWEI +
Sbjct: 338 EWIFGSWEAECGRKNDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILLE 397
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
++++ M AV+ ++KA+ + W P E + FE+ +VD A ++++L+
Sbjct: 398 GFVQSRQMDKAVNAIKKALSLSK--SCHWRPPLELVEAIATFFEEHGNVDDANRYIKVLQ 455
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
K + + +++ ++R Y A P + + +++ + E +L+
Sbjct: 456 K-FNLTSLPLYKSVLRAYIKADAVPPNISEMIARDQIIMDEEMDRLI 501
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 185/356 (51%), Gaps = 7/356 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KAE + K+ EL L S PFN +M LY T K+P ++Q+MK + + + +YN+
Sbjct: 172 TNKAETFMVKLYELGLVLSPHPFNEMMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNL 231
Query: 62 WMRALAAVND--ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
WM A ++ E V +M+ D V W++ + LA+ Y +AG +KA LK+ E
Sbjct: 232 WMNACTEEEGYGVAAVETVFRQMQNDRNVEVGWSSLATLANAYKKAGQSKKAILVLKDAE 291
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + + Y FLITLY V R+W + + + +Y+ ++ LV L D+
Sbjct: 292 RKLSTCNRLGYFFLITLYASLKEKEGVLRLWEASKAVGGRISCANYICILICLVKLGDIV 351
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A++ F EWES C YDIRV+NV++GAYA+ G +E AE L ++G PN KT EI
Sbjct: 352 QAKRIFLEWESNCQKYDIRVSNVLLGAYARNGSMEEAESLHLHTLQKGGCPNYKTLEILM 411
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ Y+ M A+ +++A+ + W P + + E++ ++ A ++ L
Sbjct: 412 EGYVNWQKMDEAIITMKRALAMMK--DCHWRPPHGLVLAIAEYLEKDGNLKYANKYITDL 469
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI--CVE 353
+ + +++ L+R + +A + +L+ + +K+E+ + +L+A CV+
Sbjct: 470 RN-FGLFSLSLYKILLRMHLSANKPPFHILKMMDEDKIEMDNETLSILKAFTGCVQ 524
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 182/348 (52%), Gaps = 5/348 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA ALLEK+K L FN +M LY + G K+P I+++MKA + D YTYN
Sbjct: 65 MAQKAGALLEKLKSTGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPKDVYTYN 124
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ M + DI G E++ EE+K D V AD TF LA+ V AGL EKA+ LKE+E
Sbjct: 125 ILMDVKSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAKVYLKEMEE 184
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ R+ SAY LI+ YG G++ V R+W ++ + P +N SY+ +I+ L +
Sbjct: 185 GDIFRNRSAYDILISQYGAVGDVDGVERVWEKVK-SGPIVSNRSYITVIEAFGKLGMVEK 243
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ ++ R N ++ AY ++G ++ AE+L + + G NA T+
Sbjct: 244 AEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLMDDMEKLGRKKNAITYHHLVT 303
Query: 241 YYLRNGDMKLAVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
YL+ + AV +++A +D +G W ET+ + F + +V AE + +
Sbjct: 304 GYLKTDQLDKAVAAMKEALVDPKQGRSKPWF---ETLVAVLDAFAERGNVVNAEQQFQEI 360
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
KKA L ++V+ L++ Y + + L R+ +K+ ++ + LL
Sbjct: 361 KKAYPRLNIQVYNILLKAYINSRVPALGFLHRMSTDKLVPNDETLSLL 408
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 185/354 (52%), Gaps = 11/354 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KAE + K+ EL L S PFN +M LY T K+P +IQ+MK + I + +YN+
Sbjct: 147 TSKAETFMLKLYELGLVVSPHPFNEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNL 206
Query: 62 WMRALAAVND--ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
WM A + ++ E V +M D V W + + LA+ Y +AG +KA LK+ E
Sbjct: 207 WMNACSEEEGYVVAAVETVFRQMLNDRNVEVGWGSLATLANAYKKAGQSKKAILVLKDAE 266
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + + + FLITLY + V R+W + + + +Y+ ++ LV L D+
Sbjct: 267 KKLSTCNRLGHFFLITLYASLKDKEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIV 326
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A++ F EWES C YDIRV+NV++GAY + G +E AE L ++G PN KT EI
Sbjct: 327 QAKRIFLEWESNCQKYDIRVSNVLLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTLEILM 386
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ Y+ M A+ +++A+ + W P + + E++ +++ A+ ++
Sbjct: 387 EGYVNWQKMDEAIITMKRALAMMK--DCHWRPPHGIVLAIAEYLEKDGNLEYADKYI--- 441
Query: 300 KKAVDDLG---VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
+ +LG + +++ L+R + +A + +L+ + +KVE+ + +L+A
Sbjct: 442 -TDIHNLGLVSLSLYKVLLRMHLSANKPPFHILKMMDEDKVEIDNETLSILKAF 494
>gi|326504234|dbj|BAJ90949.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 112/159 (70%)
Query: 195 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 254
YDIRV N ++ AY EG L+ A LK+RA+ RG NAKTWEIF ++YL+ GD+K A C
Sbjct: 42 YDIRVANALMKAYVTEGMLDKAIALKKRAKMRGGRLNAKTWEIFMEHYLKVGDLKNAHWC 101
Query: 255 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 314
++AI G G WVP + T M +FE++KDVDGAE F+E+LKK DLG VFEPL
Sbjct: 102 ADRAIKKGHSSGRIWVPPHDVTETLMGYFEKKKDVDGAESFVEVLKKVQKDLGTVVFEPL 161
Query: 315 IRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
+RTYAAAG+ P M RLK+E VE+SE + KL+++ICV+
Sbjct: 162 VRTYAAAGKKFPGMRHRLKIENVELSEETDKLVDSICVD 200
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 180/336 (53%), Gaps = 29/336 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAEA ++KM+EL L ++ +N +++LY+ G EK+ A+++EM+ + D YT+N+
Sbjct: 122 EKAEATMQKMRELGL-VQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIR 180
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE--- 119
+ A A ++I E+++ +M+ D + D+ TF +A+ Y++AGL EK+ LK E
Sbjct: 181 LHAYVATSNIEEMEKLLMKMETDSLINIDFHTFFAVANGYLKAGLLEKSIVMLKRAEELT 240
Query: 120 -----NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI---SYLNMIQV 171
AH AY+ L+TLYG GN VYR+W S + NT I +Y+ MI
Sbjct: 241 VPMVGTTKAH----AYEMLLTLYGSAGNKDGVYRVWNS----YKNTGRIFNSTYICMINS 292
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
L+ L D+ GAE +EW S YDIR+ N MI AY+++G + AEE + G
Sbjct: 293 LMRLGDIDGAEWISEEWVSRKTLYDIRIPNTMIRAYSRKGLWKKAEEYVNKIVESGMQLE 352
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
A +W+ + Y G M AV+ L+KAI + W P+ T++T + + E + D +
Sbjct: 353 ASSWDHLATGYHFGGQMAKAVETLKKAISISKPG---WKPNPYTLKTCLWYLESKGDEEA 409
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV 327
AE E+LK + V P + YA SP+
Sbjct: 410 AE---ELLKFVSEHHPV---SPAVILYAGILEQSPL 439
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 179/337 (53%), Gaps = 3/337 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K+ + L+KMKEL SS+ +N++M LY G EK+ + EMK + ++PD+++Y +
Sbjct: 145 VDKSLSHLKKMKELGFALSSLTYNNIMCLYTNIGQHEKVSDVFNEMKENHVLPDNFSYRI 204
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + +DI G +++EM+ + DW T+S +A+ Y++A L +A AL++ E R
Sbjct: 205 CIGSYGVRSDIDGMNAILKEMESQPHIVMDWNTYSVVANFYIKAELSSEAIDALRKCEKR 264
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+D Y LI+LY + G +EV R+W + A N ++ M++ LV L++ A
Sbjct: 265 LDDKDGEGYNHLISLYARLGKKNEVLRLWDMEKSACKRCLNRDFITMLESLVKLEEFDEA 324
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+K KEWE YD V NV++ Y+++ E AE + + ++ + +W + +D
Sbjct: 325 DKILKEWEFSGNCYDYGVPNVVVVGYSEKDFPEKAEAILQDIWKKRKYTDTSSWILVADR 384
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
YL G+M+ A++CL+ A+ + K P+ I + V+ AE + +LKK
Sbjct: 385 YLLKGEMEKALECLKTAV-CLYPENKKRKPNHRVISSIYSWIGDNASVEDAEALVRLLKK 443
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVE 338
+ ++ L++ Y A + +L R+K + ++
Sbjct: 444 FQKNR--HMYHSLLKAYVRADKEVDGVLDRMKEDNID 478
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 183/352 (51%), Gaps = 9/352 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE KM+E+ + SS + +M LY +TG E++ A+ Q+M+ + PD+++
Sbjct: 112 VDKAEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEA 170
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A D+ G +V+++ ++ W ++ AS+++++G+ A AL E E R
Sbjct: 171 MLAAYIAAEDVQGVGKVLDKANPHEKLVT-WHGHASAASLFMKSGMQVGAVMALVEAERR 229
Query: 122 NAHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + AY FL+ Y + G +E RIW + P N Y++ + L+ D+ G
Sbjct: 230 ISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVP-PCNTMYMSRLSALLRTNDIDG 288
Query: 181 AEKCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE KEWE+ Y D R+ NVM+ AY +EG +E A L + A ++G P A TW +
Sbjct: 289 AEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYKLA 348
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ + G + AVD KA+D+ W P + + HF +KDV AE + L
Sbjct: 349 GGFFKTGQVPEAVDMTRKALDSAT---PPWRPDLANVLMSLNHFVDQKDVGAAEEMVSTL 405
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
+K V L +V+ L++TY AG+ +L R+K + +E E ++++L C
Sbjct: 406 QKLV-PLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADEETERILAGEC 456
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 185/347 (53%), Gaps = 9/347 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE KM+E+ + SS + S+M LY +TG E++ A+ Q+M+ + PD+++
Sbjct: 160 VDKAEEHFAKMQEMGMK-SSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTFSVES 218
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A D+ G +V+++ ++ W + AS+++++G+ +A AL E E R
Sbjct: 219 MLAAYIAAEDVEGVGKVLDKANPHEKLV-KWHGQALAASLFMKSGMQVRAVMALLEAERR 277
Query: 122 NAHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + AY FL+ Y G EV RIW + P +N YL+ I L+ + D+ G
Sbjct: 278 ISPKSSRIAYAFLLKTYTDLGMYPEVGRIWSVYKSKVP-PSNTMYLSRISALLKMNDIDG 336
Query: 181 AEKCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE KEWE+ Y D R+ N+M+ AY +EG +E A L + A ++G P A TW +
Sbjct: 337 AEATLKEWETVSLRYHDFRLINLMVDAYCREGLVEKAVALVDDAIKKGRTPYANTWYKLA 396
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ + G++ AVD KA+++ W P + + HF +KDV+ AE +L
Sbjct: 397 GGFFKTGEVSKAVDMTRKALESA---TPPWKPDLTNVLMSLEHFMNQKDVEAAEEIASML 453
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKL 346
+K + L EV+ L++TY AG+ +L R+K + +E E ++++
Sbjct: 454 QK-LGPLTKEVYHCLLKTYVRAGKPVSDLLERMKKDGLEADEETERM 499
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 168/301 (55%), Gaps = 9/301 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEA ++KMK+L +S+ +N +++LY+ G+ EK+ ++QEM+ + I D TY + +
Sbjct: 158 KAEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRL 217
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK---ELEN 120
A +DI G E+++ +M+ D ++ + + A+ Y++AGL +K LK +L +
Sbjct: 218 NACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLIS 277
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N R AY+FL+TLY +GN +EVYRIW + N Y+ MI L+ L D+ G
Sbjct: 278 GNTRR--FAYEFLLTLYTASGNKAEVYRIWNKYK-EIGRFFNSGYICMISSLLKLDDIDG 334
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F+EW+S +DIR+ N M+ Y+++G LE AE + G +P+A +W +
Sbjct: 335 AERIFEEWDSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAA 394
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y +G M AV+ + KAI + W PS T+ + + + D + E L+I K
Sbjct: 395 GYHSSGQMTKAVETIRKAISVSKPG---WKPSLLTLSACLEFLKGQGDAETLEELLKIAK 451
Query: 301 K 301
+
Sbjct: 452 E 452
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 183/352 (51%), Gaps = 9/352 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE KM+E+ + SS + +M LY +TG E++ A+ Q+M+ + PD+++
Sbjct: 157 VDKAEEHFAKMQEMGMT-SSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEA 215
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A D+ G +V+++ ++ W ++ AS+++++G+ A AL E E R
Sbjct: 216 MLAAYIAAEDVQGVGKVLDKANPHEKLVT-WHGHASAASLFMKSGMQVGAVMALVEAERR 274
Query: 122 NAHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + AY FL+ Y + G +E RIW + P N Y++ + L+ D+ G
Sbjct: 275 ISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVP-PCNTMYMSRLSALLRTNDIDG 333
Query: 181 AEKCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE KEWE+ Y D R+ NVM+ AY +EG +E A L + A ++G P A TW +
Sbjct: 334 AEATLKEWETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYKLA 393
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ + G + AVD KA+D+ W P + + HF +KDV AE + L
Sbjct: 394 GGFFKTGQVPEAVDMTRKALDSAT---PPWRPDLANVLMSLNHFVDQKDVGAAEEMVSTL 450
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
+K V L +V+ L++TY AG+ +L R+K + +E E ++++L C
Sbjct: 451 QKLV-PLTRDVYHCLLKTYVRAGKPPSDLLERMKEDGLEADEETERILAGEC 501
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 168/300 (56%), Gaps = 3/300 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +K+ A ++KMKE+ L S + +N +M LY TG +K+P ++ EMK + ++PD+++Y
Sbjct: 162 LIDKSLAHMQKMKEMGLASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYR 221
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A +D+ E V++EM+ ++ DWTT+S +A +++AG+ +KA L++ E+
Sbjct: 222 ICISSYGARSDVISMENVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCED 281
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D + LI+ Y G+ +EV R+W L+ N Y+ M+ LV L+ L
Sbjct: 282 K-VDEDALGFNHLISHYTNLGHKNEVMRLWALLKKG-KKQLNRDYITMLGSLVKLELLEE 339
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE EWES C YD RV NV++ Y+++G +E AE++ G P+ +W I +
Sbjct: 340 AENLVMEWESSCQCYDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIAS 399
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL +++ A +C+++A+ +G W P + + +R + + + + F+ LK
Sbjct: 400 GYLEKQNLEKAFECMKEALAV-KGQNKVWRPKPNVLSSILRWLSENRRYEEMKEFMSSLK 458
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 171/309 (55%), Gaps = 9/309 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AEA+++K+KEL ++ +N L+ LYA+ G EK+ ++QEMK + + + T+ +
Sbjct: 152 EEAEAIMKKIKELRPMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLC-NGATFTIR 210
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A D+ G E+++ +M+ D DW T+S A+ Y++AG EKA ALK+ E
Sbjct: 211 LNAYVAAKDVEGMEKLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSV 270
Query: 123 AHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ L AY+ L + Y GN EVYR+W ++ N N SY+ M+ L+ L D GA
Sbjct: 271 KGKKLRLAYESLQSTYAAIGNKDEVYRLWNRIK-NLQNCWNSSYICMLSSLLKLDDFDGA 329
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK EWES +D R+ N+MI AY K G L+ AE ++ G + +W+ +
Sbjct: 330 EKILAEWESEHKNFDTRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAG 389
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y + DM+ AV ++KAI R W PS T+ + + +++ D++ A LEILK
Sbjct: 390 YHMDNDMEKAVQTMKKAILANRPG---WRPSPSTLVACITYLKEKLDLESA---LEILKL 443
Query: 302 AVDDLGVEV 310
+D +++
Sbjct: 444 CKEDGHIKI 452
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 7/153 (4%)
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
++ V+ + AE + + D R + +++L S Y E E+AE +K+++
Sbjct: 112 ISKVHGLKKAEDFFQGIPDDKR---GFKIYASLLSCYAEHKSLEEAEAIMKKIKELRPMH 168
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLA-FPNTANISYLNMIQVLVNLKDLPGAEKC 184
Y L+ LY Q G ++ R+ + ++ N A + + V KD+ G EK
Sbjct: 169 LTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTI--RLNAYVAAKDVEGMEKL 226
Query: 185 FKEWESG-CATYDIRVTNVMIGAYAKEGRLENA 216
+ E+ AT D + Y K G +E A
Sbjct: 227 LMQMEADPMATVDWYTYSTAANGYLKAGNVEKA 259
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 171/347 (49%), Gaps = 3/347 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EK+ +KMKE+ SS+ +N++M LY G EK+P ++ EMK ++ PD+Y++ +
Sbjct: 142 VEKSLLHFQKMKEMGFVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEENVAPDNYSFRI 201
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A++D+ ++ +M+R DW T++ A Y++ G ++A LK E R
Sbjct: 202 CINAFGAMSDLERIGGILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRAVELLKMSEYR 261
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+D Y LITLY + GN EV R+W + A N YL ++Q L+ + L A
Sbjct: 262 LEKKDGEGYNHLITLYARLGNKIEVLRLWELEKEACKRRINQDYLTVLQSLMKIDGLKEA 321
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E EWES YD RV N +I Y + E AE + E RRG ++W + +
Sbjct: 322 EVVLTEWESSGNCYDFRVPNTVIRGYTGKSMEEKAEAMLEDLARRGKTTTPESWGLVATA 381
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y G + A C++ A+ + KW P + + + + E + E F+ L+
Sbjct: 382 YAEKGALGNAFKCMKTALGI-EVENRKWRPGLKLVTSVLSWLGGEGSLKEVESFVASLRN 440
Query: 302 AVDDLGVEVFEPLIRT-YAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + +++ L++ G +L+R+K +++E E + +L
Sbjct: 441 CI-GVNKQMYHALVKADIREGGSNIDTLLKRMKDDQIETDEETTVIL 486
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 122/200 (61%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKIQLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+A +WTTFS +A++Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTMAAMYSKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +LI+LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 122/200 (61%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y ++G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKSGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 122/200 (61%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y ++G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKSGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 165/298 (55%), Gaps = 5/298 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
KAE + ++MKEL +P+N ++ LY +TG + +++EM+ ++ PD +T N
Sbjct: 61 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 120
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
+ A + V+D+ G E+ + + D + DW T+++ A+ Y++AGL EKA L++ E
Sbjct: 121 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 180
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
NA + AY+ L++ YG G EVYR+W SL N Y+++I L+ + D+
Sbjct: 181 NAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEV 239
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK +EWE+G + +DIR+ +++I Y K+G +E AEE+ ++ + TWE +
Sbjct: 240 EKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALG 299
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y G M+ AV+ ++AI+ + W P + + + + E ++D++G L +L
Sbjct: 300 YKMAGKMEKAVEKWKRAIEVSKPG---WRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 354
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 122/200 (61%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y ++G EKAE+ L+ LE R
Sbjct: 85 LSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKSGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 122/200 (61%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y ++G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKSGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 165/298 (55%), Gaps = 5/298 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
KAE + ++MKEL +P+N ++ LY +TG + +++EM+ ++ PD +T N
Sbjct: 156 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTR 215
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
+ A + V+D+ G E+ + + D + DW T+++ A+ Y++AGL EKA L++ E
Sbjct: 216 LHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV 275
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
NA + AY+ L++ YG G EVYR+W SL N Y+++I L+ + D+
Sbjct: 276 NAQKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEV 334
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK +EWE+G + +DIR+ +++I Y K+G +E AEE+ ++ + TWE +
Sbjct: 335 EKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALG 394
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y G M+ AV+ ++AI+ + W P + + + + E ++D++G L +L
Sbjct: 395 YKMAGKMEKAVEKWKRAIEVSKPG---WRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 180/346 (52%), Gaps = 3/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + +++ L FN +M LY T EK+ ++I MK ++I + +YN+
Sbjct: 166 VQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNI 225
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
WM A A V+ ++ + +EM D V W+T+ LA+I+ + G KA L+ E +
Sbjct: 226 WMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETK 285
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y F++T Y + V R+W + ++ +Y++ + L+ + D+ A
Sbjct: 286 LSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRA 345
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F WE+ +D+RV+NV++GAY + G +E AE L +GA PN KTWEI +
Sbjct: 346 EWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEG 405
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
++++ M AV+ ++K + + W P E + ++FE++ V+ A+ F+++L+K
Sbjct: 406 FVQSKQMDKAVNAMKKGLSLLK--TCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQK 463
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + +++ L+ Y A + + + +++++ E +L+
Sbjct: 464 -FNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLI 508
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 121/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 180/346 (52%), Gaps = 3/346 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + +++ L FN +M LY T EK+ ++I MK ++I + +YN+
Sbjct: 166 VQKAETFMAELQRYGLPVDPHSFNEIMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNI 225
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
WM A A V+ ++ + +EM D V W+T+ LA+I+ + G KA L+ E +
Sbjct: 226 WMNACAEVSGLASVQSAFKEMLNDDMVEVGWSTYCTLANIFKKYGQSSKALACLRTAETK 285
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y F++T Y + V R+W + ++ +Y++ + L+ + D+ A
Sbjct: 286 LSSTGRLGYSFIMTCYAALNDRDGVIRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRA 345
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F WE+ +D+RV+NV++GAY + G +E AE L +GA PN KTWEI +
Sbjct: 346 EWTFGSWEAESKKHDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEG 405
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
++++ M AV+ ++K + + W P E + ++FE++ V+ A+ F+++L+K
Sbjct: 406 FVQSKQMDKAVNAMKKGLSLLK--TCHWRPPLELLEAIAKYFEEQGSVEDADRFIKVLQK 463
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ + +++ L+ Y A + + + +++++ E +L+
Sbjct: 464 -FNLTSLPLYKSLLGAYINADIVPQNIPQMIAGDQIDMDEEMDQLI 508
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 121/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 164/298 (55%), Gaps = 5/298 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
KAE + ++MKEL +P+N ++ LY +TG + +++EM+ ++ PD +T N
Sbjct: 157 HKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDIFTVNTR 216
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
+ A +AV+D+ G E+ + + D + DW T+++ A+ Y++AGL EKA L++ E
Sbjct: 217 LHAYSAVSDVEGMEKFLMRCEADTGLHLDWRTYADTANGYIKAGLTEKAIEMLRKSEQMV 276
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N + AY+ L++ YG G EVYR+W SL N Y+++I L+ + D+
Sbjct: 277 NPRKRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEV 335
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK +EWE+G + +DIR+ +++I Y K+G +E AEE+ ++ + TWE +
Sbjct: 336 EKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNMLVQKWRVEDTSTWERLALG 395
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y G+M+ AV+ ++AID + W P + + + + E +D++ L +L
Sbjct: 396 YKMAGEMEKAVEKWKRAIDVSKPG---WRPHQVVLMSCVDYLEGRRDMESLRKILRLL 450
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 182/350 (52%), Gaps = 9/350 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 58
M +KA+ALLEK+K G ++P FN +M LY + G K+ I+ +MK + D YT
Sbjct: 105 MAQKADALLEKLK--GTGILTLPFAFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYT 162
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
YN+ M A DI G E++ EE+ D V AD TF LA+ V AGL +KA LKE+
Sbjct: 163 YNILMDVKARSGDIEGMEKIFEELSADENVKADAATFGTLATFCVHAGLLDKARSYLKEM 222
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
E + R+ SAY LI+ YG G+ V R+W ++ + P +N SY+ +I+ L +
Sbjct: 223 EEGDVFRNRSAYDILISQYGAVGDQEGVERVWEKVK-SGPVVSNRSYITVIEAFGKLGMV 281
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
AE+ + R N ++ AYA++G +E AE+L E + G NA T+
Sbjct: 282 EKAEELYGIMSKSKGLILSRQFNSLLSAYARQGLMEKAEKLVEDMVKLGRKKNAVTYHHL 341
Query: 239 SDYYLRNGDMKLAVDCLEKAI-DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
YL+ + A+ +++A D+ +G WV ET+ + + + + DV AE +
Sbjct: 342 VTGYLKTDQLDKALAVMKEAQGDSKQGRSRLWV---ETLISVLDAYAERGDVISAEKQFQ 398
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+KKA ++V+ L++ Y + + L+R+ +K+ +E + LL
Sbjct: 399 DIKKAYPRPNIQVYNILLKAYIKSRVPALGFLQRMLADKLVPNEETLNLL 448
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 121/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 121/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 121/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 121/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLGELEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 121/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G +KAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLGQLDKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 121/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y ++G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKSGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FP N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 120/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 120/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 175/326 (53%), Gaps = 7/326 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAEA+++++++L +++ +N+LM +Y + G+ EK+ ++ EM+ I D +T +
Sbjct: 165 VDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAI 224
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A AA ++I G + ++ M+ D R+ DW +++ +A Y++ GL +K +K+LE
Sbjct: 225 RLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEEL 284
Query: 122 -NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+A A+ L+ LY +T E+ R+W L N Y+ MI L+ D+
Sbjct: 285 IDAKGSNVAFDNLLKLYAETRQRDELDRVW-MLYKKKEKIYNKGYMAMISSLLKFDDIDA 343
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK +EWES +YD RV N +I AY ++G E AE L + +G +P TW ++
Sbjct: 344 AEKVLEEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLAN 403
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
YL + + AV+ L+KA+ + W PS T+ T + + E +DV+GA F+ L+
Sbjct: 404 GYLEDSQIPKAVEALKKAVVVCPPN---WKPSKNTLATCLEYLEGNRDVEGAGEFIRFLQ 460
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSP 326
V V + L+ +Y G+ P
Sbjct: 461 NE-GIFSVGVCKRLL-SYIENGKPQP 484
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 181/350 (51%), Gaps = 5/350 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSS-MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
+ +K+ +L++KMK++ GF S + +N++M+LY +T EK+P ++++MK + P+ ++Y
Sbjct: 147 LVDKSLSLMQKMKDM--GFVSFLNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSY 204
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + + D++ E+++EEM+R+ + DW T+S + + Y++A + EKA L + E
Sbjct: 205 RICINSYCVRGDLANVEKLLEEMEREPHIGIDWITYSMVTNFYIKADMREKALVCLMKCE 264
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + AY LI+ + + R W+ + N Y+ M+ LV L +L
Sbjct: 265 KKTHRGNTVAYNHLISHNAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELD 324
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AEK EWE T D RV N+++ Y + G +E AE L + G P +W I +
Sbjct: 325 KAEKVLGEWELSGNTCDFRVPNILLIGYCQRGLVEKAEALLRKMVAEGKTPIPNSWSIVA 384
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y+ +M+ A C+++A+ +W P + I + +D++ AE F+
Sbjct: 385 SGYVAKENMEKAFQCMKEAVAV-HAQNKRWRPKVDVISSIFSWVTNNRDIEEAEDFVNSW 443
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 349
K+V+ + ++ L++ G+ +L +K + +E+ E K+ L +
Sbjct: 444 -KSVNAMNRGMYLSLMKMCIRYGKHVDGILESMKADNIEIDEEIKETLNS 492
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 120/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLGKLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FP N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 120/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FP N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 120/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEDLVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FP N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 120/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +++ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 119/200 (59%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FP N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 120/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + F N N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFTNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 120/200 (60%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +K+ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V +EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMYAKLGELEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + F N N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFTNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 119/200 (59%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +++ ++ EMK I DSY+YN+W
Sbjct: 25 DKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + E+V EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLGQLEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FPN N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPNIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 119/200 (59%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+E+M+ + +P+N +MTLY K +++ ++ EMK I DSY+YN+W
Sbjct: 25 DKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEELVSEMKQKKISLDSYSYNIW 84
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + E+V EM D R+ +WTTFS +AS+Y + G EKAE+ L+ LE R
Sbjct: 85 LSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMYAKLGELEKAEQCLRNLETRI 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+RD Y +L++LYG GN EVYR+W + FP N Y ++I LV D+ GAE
Sbjct: 145 TNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKSVFPKIPNWGYHSVISSLVRSGDIEGAE 204
Query: 183 KCFKEWESGCATYDIRVTNV 202
K ++EW +++D ++ N+
Sbjct: 205 KLYEEWLPVKSSFDPKIGNL 224
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 168/311 (54%), Gaps = 12/311 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+AEA+L+K+KEL+ + N ++ LYAK G EK+ ++QEMK I ++ TY +
Sbjct: 139 VEEAEAVLKKIKELHPVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDIC-NAGTYTI 197
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN- 120
+ A DI G E+++ +M+ D DW T+ A+ Y + FEK LK+ E+
Sbjct: 198 RLNAYVIATDIKGMEKLLMQMEVDPMATVDWYTYMTAANGYRKVHNFEKVAAMLKKSEHV 257
Query: 121 -RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R + L AY+ + T+Y GN EV+R+W P N SY+ M+ LV L D+
Sbjct: 258 ARGKTKRL-AYESIQTMYAIIGNKDEVHRLWN--MCTSPKKPNKSYIRMLSSLVKLDDID 314
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
GAEK +EWES +D+R+ N+MI AY K G+ + AE R G + +TW+ +
Sbjct: 315 GAEKILEEWESVHENFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKHLDGRTWDRLA 374
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y DM+ AV ++KA+ T G + P T+ +++ +++ D+D A LEIL
Sbjct: 375 CGYNAGNDMENAVQAMKKAVSTNLA-GRR--PDPFTLVACVKYLKEKGDLDLA---LEIL 428
Query: 300 KKAVDDLGVEV 310
K +++ + V
Sbjct: 429 KLCIENSHISV 439
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 169/312 (54%), Gaps = 13/312 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+AEA+++ +KEL+ + N ++ LYAK G EK+ ++QEMK I S TY +
Sbjct: 139 VEEAEAVMKXIKELHPVNITPCCNMMLELYAKKGKYEKLDRLMQEMKEKDICNAS-TYTI 197
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN- 120
+ A V DI G E+++ +M+ D DW T+ A+ Y FEK LK+ E+
Sbjct: 198 RLNAYVVVTDIKGMEKLLMQMEADPVATVDWYTYMTAANGYRRVHNFEKVAEMLKKSEHL 257
Query: 121 -RNAHRDLSAYQFLITLYGQTGNLSEVYRIWR-SLRLAFPNTANISYLNMIQVLVNLKDL 178
R R L A++ + T+Y GN EVYR+W L PN N SY+ M+ L L ++
Sbjct: 258 ARGNTRRL-AFESIQTMYAIIGNKDEVYRLWNMCTSLKKPN--NSSYIRMLSSLAKLDEI 314
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
GAEK +EWES A +D+R+ N+MI AY K G+ + AE R G + +TW+
Sbjct: 315 DGAEKILEEWESKYANFDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKQLDGRTWDRL 374
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+ Y DM+ AV ++KA+ + GG+ P T+ +++ +++ D+D A LEI
Sbjct: 375 ACGYKAGNDMEKAVQAMKKAV--SKNLGGR-RPDPFTLVACVKYLKEKGDLDLA---LEI 428
Query: 299 LKKAVDDLGVEV 310
LK +++ + V
Sbjct: 429 LKLCIENSHISV 440
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 152/295 (51%), Gaps = 7/295 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKA + +M EL + S+ N+LM LY + G K+ + EMK ++ PD T
Sbjct: 166 MEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNVQPDELTCC 225
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA-LKELE 119
+ MR+ AA N I + M V W+ F L SIY+ AG+ E+AE A ++ E
Sbjct: 226 ILMRSHAAHNKIDTVKETFYNMSLLD-VPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQE 284
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP-NTANISYLNMIQVLVNLKDL 178
+ FL+ + GNL V R+W+ +++ F N N SYL M+Q L L D
Sbjct: 285 FLGFDHGRHPFYFLMRQFASIGNLRGVNRVWKDIKMTFSYNRTNFSYLLMLQCLYKLGDT 344
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ +KEWE YD R+TN++ A+ + G AE L E+ + RG D + +T E+F
Sbjct: 345 DRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFDFETCELF 404
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
++YL GD A+ EK + G + ET + F++ FE++K V+GA+
Sbjct: 405 REHYLGKGDTTSALKWAEKMTKLPKKQGKQ---DQETCK-FLKWFEEDKVVEGAK 455
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 141/273 (51%), Gaps = 2/273 (0%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+ Y EK+ ++I MK ++I + +YN+WM A A V+ + + V + M D
Sbjct: 183 LLHCYVMERDHEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDE 242
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
V W+T+ LA+I+ + GL +A+ L + E + + Y F++T Y + V
Sbjct: 243 TVKVGWSTYCTLANIFRKNGLNTEAQACLVKAEAKLSPTGRLGYSFVMTCYAALNDSDGV 302
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
R+W + + Y+ + + + D+ AE F +WE+GC +D+RV+NV++GA
Sbjct: 303 MRMWEASKSVPGRILTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKHDVRVSNVLLGA 362
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
Y + +E AE L +GA PN KTWEI + Y+++ M AV C++K + +
Sbjct: 363 YVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCMKKGLSLLK--S 420
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
W P E + +HFE++ D A ++++L
Sbjct: 421 CHWRPPVELMEAIGKHFEEQGSADDAYRYIKVL 453
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 151/295 (51%), Gaps = 7/295 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKA + +M EL + S+ N+LM LY + G K + EMK ++ PD T
Sbjct: 166 MEEKATNIYRRMDELGIPSSTKLMNNLMGLYLELGQHSKAANLFDEMKERNVQPDELTCC 225
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA-LKELE 119
+ MR+ AA N I + M V W+ F L SIY+ AG+ E+AE A ++ E
Sbjct: 226 ILMRSHAAHNKIDTVKETFYNMSLLD-VPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQE 284
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP-NTANISYLNMIQVLVNLKDL 178
+ FL+ + G+L V R+W+ +++ F N N SYL M+Q L L D
Sbjct: 285 FLGFDHGRHPFYFLMRQFASIGSLRGVNRVWKDIKMTFSYNRTNFSYLLMLQCLYKLGDT 344
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ +KEWE YD R+TN++ A+ + G AE L E+ + RG D + +T E+F
Sbjct: 345 DRMKEIYKEWEYRYENYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFDFETCELF 404
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
++YL GD A+ EK + G + ET + F++ FE++K V+GA+
Sbjct: 405 REHYLGKGDTTSALKWAEKMTKLPKKQGKQ---DQETCK-FLKWFEEDKVVEGAK 455
>gi|125532536|gb|EAY79101.1| hypothetical protein OsI_34208 [Oryza sativa Indica Group]
Length = 369
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 147/258 (56%), Gaps = 6/258 (2%)
Query: 92 WTTFSNLASIYVEAGLFEKAERALKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIW 150
W +++ + + +++G+ E+A +A +E E + A + + AY FL+T+Y G SEV RIW
Sbjct: 111 WHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLTMYADLGMNSEVDRIW 170
Query: 151 RSLRLAFPNTA-NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
+ P +A N Y+ I VL+ + D+ GAEK ++EWES +D R+ N+++ AY K
Sbjct: 171 DVYKSKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVYHDSRLINLLLTAYCK 230
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 269
EG +E AE L ++ ++G P TW + Y + G A D +KA+ + + W
Sbjct: 231 EGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADLTKKALASASNE---W 287
Query: 270 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVML 329
+P + + +F ++K+V+ AE + +L++ V +++ L++TY AG+ +L
Sbjct: 288 IPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTR-DIYHGLLKTYVNAGKPVSDLL 346
Query: 330 RRLKMEKVEVSEASKKLL 347
RR+K + +E E ++K+L
Sbjct: 347 RRMKKDGMEADEETEKIL 364
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 159/300 (53%), Gaps = 5/300 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AEA + KM+E+ + + +N ++ LY + G EKI ++QEM+ I + TY +
Sbjct: 151 EEAEATMRKMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKIL 210
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A ++I ++++ +M+ D V+ DW + A+ Y++AGL +K L E
Sbjct: 211 LNAYVATSNIEEIKKILMKMEADPLVSIDWYAYVVAANGYLKAGLIDKTLTMLWRSEQLI 270
Query: 123 AHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + A + L++LY GN +VYR+W +L + N SYL MI L+ L D+ GA
Sbjct: 271 SGKSARFACETLLSLYTAVGNKEQVYRVW-NLYKTKGRSLNSSYLCMINSLLKLDDVDGA 329
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ ++EW S +DIR+ NVM+ AY+K+G E AE + G A T + +
Sbjct: 330 ERIWEEWVSIVKFFDIRIPNVMVSAYSKKGLWEKAEAFVGKIVASGIKIEASTLDRLATG 389
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y G M A + ++KAI + W P+ T+ + + + +DV E L+ILK+
Sbjct: 390 YHVRGQMLKASETIKKAISISQPG---WKPNVYTLAACLEYLKGREDVKKIEDPLKILKE 446
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 146/262 (55%), Gaps = 10/262 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA A ++K+KE+ S +P+N +M LY + G E++ ++++EMK + D +TY++
Sbjct: 146 VDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSI 205
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN- 120
+ A AA +D G E+++E+M+ + + DW + A+ Y + GL +K+ LK+ E
Sbjct: 206 RISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGL 265
Query: 121 -RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N + A+ + LY + G E++RIW + N +++MI L+ L D+
Sbjct: 266 LANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKE--KIFNKGFISMITSLLILDDIK 323
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER---ARRRGADPNAKTWE 236
GAE+ +KEWE+ +YD+R+ N+++ AY + G +E AE L RR+ + ++W
Sbjct: 324 GAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFS---VESWC 380
Query: 237 IFSDYYLRNGDMKLAVDCLEKA 258
+ YL+ + AV+ L+ A
Sbjct: 381 YLASGYLQKDQLPQAVETLKLA 402
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +K+E LL +K+ GF+ FN + LYA+ G ++I I K I +
Sbjct: 258 MLKKSEGLLANVKKK--GFA---FNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISM 312
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ +L ++DI GAER+ +E + +++ D + L Y AGL EKAE L E+
Sbjct: 313 I--TSLLILDDIKGAERIYKEWE-TRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVI 369
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ ++ +L + Y Q L + + P+ N + L +D+
Sbjct: 370 VRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAFLDGKQDVEE 429
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
EK ++ R + ++GA E
Sbjct: 430 TEKVVNLLREKDDSHPARAHDYIVGAIMTES 460
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 123/232 (53%), Gaps = 2/232 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE L E++KE N+ + + +N +MTLY G EK+ +++E+K ++PD +TYN
Sbjct: 160 LAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYN 219
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-LFEKAERALKELE 119
+W+ + AA DI G R+++EM + W + NLA+IY+ AG L A ++ E
Sbjct: 220 LWVSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAG 279
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
RD Y FLI LY GN ++ +IW+SL++ + SY+ ++ V L +
Sbjct: 280 TNTTQRDWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIK 339
Query: 180 GAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
EW+ T +DI V ++ A+A+ +E AE + R+ P
Sbjct: 340 DVGIVIDEWKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLP 391
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 125/232 (53%), Gaps = 2/232 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+T+KAE L EKMKE ++ +++PFN +MTLY G EK+ +I+ ++K + PD +TYN
Sbjct: 172 LTDKAETLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYN 231
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE-AGLFEKAERALKELE 119
+W+ +LAA +I G ++++ EM + +W + L +IYV+ A L ++ E
Sbjct: 232 LWISSLAAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESV 291
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + R+ Y LI LY GN ++ +IWRSLR+ + +Y+ ++ + L DL
Sbjct: 292 SGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLK 351
Query: 180 GAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ +W+ T +DI N ++ A+ + G E A ++ +P
Sbjct: 352 EIGEVIDQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEP 403
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 124/233 (53%), Gaps = 2/233 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE L E++K NL F+++ +N +MTLY G EK+ +++E+K I PD +TYN+W+
Sbjct: 193 KAEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWI 252
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-LFEKAERALKELENRN 122
+ AA+ +I R+++EMK D DW + ++A+IYV+AG L A+ E E
Sbjct: 253 SSCAAILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKSI 312
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
R+ Y FLI LY + +V +IW+SLR+ N +++ ++ + L L A
Sbjct: 313 TQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLKEAG 372
Query: 183 KCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ +W+ T +D+ + ++ A++ G E A + R DP T
Sbjct: 373 EVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDPTNLT 425
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 157/301 (52%), Gaps = 61/301 (20%)
Query: 3 EKAEALLEKMKELNLGF-SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAEA++++M+ ++GF ++ +N ++ LY++ G EK+ ++QEM+ + I DS+TY +
Sbjct: 153 EKAEAIMQEMR--DMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCI 210
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A +D+ G E+++ +++ D V +DW + A+ Y++A L EK A++ L+N
Sbjct: 211 RLNAYCATSDMEGMEKLLMKLETDPAVNSDWNAYIVAANGYLKADLKEK---AVEMLKNS 267
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L+ L D+ GA
Sbjct: 268 --------------------------------------------------LLKLDDMDGA 277
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK F+EW SG +D RV N++I AY K+G LE AE+L RA +G +P A TW+ +
Sbjct: 278 EKTFEEWLSGNKFFDFRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAG 337
Query: 242 YLRNGDMKLAVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y N M+ AVD L+KA + T +G W P+ T+ + + + + DV+ AE + +L+
Sbjct: 338 YHENNQMEKAVDTLKKALLATSQG----WKPNPVTLSACLEYLKGKGDVEEAENLIRLLR 393
Query: 301 K 301
+
Sbjct: 394 E 394
>gi|224125312|ref|XP_002329774.1| predicted protein [Populus trichocarpa]
gi|222870836|gb|EEF07967.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 156/321 (48%), Gaps = 44/321 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A A+ +K+K GF M + +L+ YA+ EK A +++ +M +N+
Sbjct: 17 EYANAIPQKLK----GF--MVYTALLNCYAREKDVEKAVATFKKLTDIGVMRSPLVFNIL 70
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M + DG V DW T+ A ++AG+ E A LK+LE +
Sbjct: 71 MYLY---------------FQTDGEVVGDWNTYCVAADRCLKAGIMEMAMTMLKKLEGQI 115
Query: 123 AHRDLS-AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ S A+ L+ LY + GN E+YRIW+S N Y++MI L+ L D+ A
Sbjct: 116 TEKTKSIAFDTLLKLYARKGNKDELYRIWKSDE-KRDKIYNKGYMSMISSLLMLDDIEAA 174
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E FK+WES +Y RV N++I AY + LE A L + A +G++P+A W Y
Sbjct: 175 EMMFKKWESRGLSYYFRVPNILINAYCRNNLLEKAGSLIDHAMMKGSEPSADAW-----Y 229
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
L +G L V+ ++KAI G W P ET+ + + H E + D + AE F+E+L+
Sbjct: 230 SLASG--YLEVEAMKKAILVCPG----WKPIKETLASCLDHLEGKGDQNKAEEFIELLRT 283
Query: 302 AVDDLGVEVFEPL----IRTY 318
+F P+ +RTY
Sbjct: 284 E------NIFSPVAHNRLRTY 298
>gi|388512893|gb|AFK44508.1| unknown [Medicago truncatula]
Length = 244
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 109/195 (55%), Gaps = 2/195 (1%)
Query: 107 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 166
LFEKA+ LK+ E R RD + +L++LYG GN EVYR+W + + FP+ N+ Y
Sbjct: 3 LFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYH 62
Query: 167 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 226
+I LV + D+ GAEK ++EW S + D R+ N++I Y K+G+ + +
Sbjct: 63 AIISSLVRMDDIEGAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEG 122
Query: 227 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 286
G PN+ TWE+ S+ ++ + A+ CLEKA T D W P + F++ + E
Sbjct: 123 GGCPNSTTWELLSEGHIAEKRVSEALSCLEKAFMT--SDSKSWKPKPIKLAAFLKLCQDE 180
Query: 287 KDVDGAEGFLEILKK 301
D++ A+ +E+L+K
Sbjct: 181 DDMESAKVLIELLRK 195
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKA+ L+K + LG +PF+ L++LY G+ +++ + K+ + Y+
Sbjct: 3 LFEKAQECLKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYH 62
Query: 61 VWMRALAAVNDISGAERVIEE 81
+ +L ++DI GAE++ EE
Sbjct: 63 AIISSLVRMDDIEGAEKLYEE 83
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 120/222 (54%), Gaps = 1/222 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT+KAE L E+MK+ +L + +N +MTLY G +K+PA+ +E+K ++ PD +TYN
Sbjct: 184 MTDKAERLFERMKDADLSIDVLVYNEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYN 243
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A AA D+ + +++EM +D WT + NLA+IYV A + +L E E
Sbjct: 244 LRISASAASMDLEIFKGILDEMSKDPNSNEGWTLYRNLATIYVNASQLVSSGNSLVEAEA 303
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + R+ Y FLI L+ GNL V IW+S+++ + +Y+ ++ + L
Sbjct: 304 KISQREWITYDFLILLHTGLGNLERVKDIWKSMQMTSQRMTSRNYICVLSSYLMCGQLKD 363
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A++ +W+ S +DI N + A G + A+ +E
Sbjct: 364 AKEIVDQWQRSKAPEFDISACNRLFDALLGAGFTDTADSFRE 405
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 119/222 (53%), Gaps = 1/222 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT+KAE L E+MK+ NL ++ +N +MTLY G +K+ I +E+K ++ PD +TYN
Sbjct: 177 MTDKAERLFERMKDANLSMDALVYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLFTYN 236
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A AA D+ G + +++EM +D WT + NLAS+YV+A + +L E E
Sbjct: 237 LRVSAAAASMDLEGFKGILDEMSKDPNSKEGWTLYRNLASVYVDASQLVGSGNSLVEAEA 296
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + R+ Y FL+ L+ GN + IW+S+ + + +Y+ +I + L
Sbjct: 297 KISQREWITYDFLVILHAGLGNQERIKDIWKSMVMTSQRMTSRNYICVISSYLMCGQLKD 356
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A + +W+ S +DI N ++ A G + A+ +E
Sbjct: 357 AGEIVDQWQRSKAPEFDISACNRLLDALLSAGLTDTADRFRE 398
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 116/221 (52%), Gaps = 2/221 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+T+KAE L +++K+ NL F ++ +N +MTLY G EK+P++++E+K + PD +TYN
Sbjct: 161 LTKKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYN 220
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-ERALKELE 119
+W+ AA+ +I R+++EM W + NLA+IY+ G + A L E E
Sbjct: 221 LWISYCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETE 280
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R R Y FLI LYG G+ ++ +IW SLR+ + +Y+ +I + L
Sbjct: 281 KRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTK 340
Query: 180 GAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEEL 219
+ +W+ T +D+ ++ A+ G E A L
Sbjct: 341 EVGEVIDQWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNL 381
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT+KAE L ++MK+ NL + + +N +MTLY G +K+P I +E+K PD +TYN
Sbjct: 192 MTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYN 251
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A AA D+ G + +++EM +D W + NLA IYV+AG + +L E E
Sbjct: 252 LRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEA 311
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + R+ Y FL+ L+ GN + IW+S+ + + +Y+ ++ + L
Sbjct: 312 KISQREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKD 371
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A + +W+ S +DI N + A+ G + A +E
Sbjct: 372 AGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRE 413
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT+KAE L ++MK+ NL + + +N +MTLY G +K+P I +E+K PD +TYN
Sbjct: 192 MTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYN 251
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A AA D+ G + +++EM +D W + NLA IYV+AG + +L E E
Sbjct: 252 LRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEA 311
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + R+ Y FL+ L+ GN + IW+S+ + + +Y+ ++ + L
Sbjct: 312 KISRREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKD 371
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A + +W+ S +DI N + A+ G + A +E
Sbjct: 372 AGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRE 413
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT+KAE L ++MK+ NL + + +N +MTLY G +K+P I +E+K PD +TYN
Sbjct: 54 MTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYN 113
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A AA D+ G + +++EM +D W + NLA IYV+AG + +L E E
Sbjct: 114 LRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEA 173
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + R+ Y FL+ L+ GN + IW+S+ + + +Y+ ++ + L
Sbjct: 174 KISRREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKD 233
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A + +W+ S +DI N + A+ G + A +E
Sbjct: 234 AGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRE 275
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 116/222 (52%), Gaps = 1/222 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT+KAE L ++MK+ NL + + +N +MTLY G +K+P I +E+K PD +TYN
Sbjct: 233 MTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYN 292
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A AA D+ G + +++EM +D W + NLA IYV+AG + +L E E
Sbjct: 293 LRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEA 352
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + R+ Y FL+ L+ GN + IW+S+ + + +Y+ ++ + L
Sbjct: 353 KISRREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKD 412
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A + +W+ S +DI N + A+ G + A +E
Sbjct: 413 AGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRE 454
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 117/220 (53%), Gaps = 4/220 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE +++K NL F+++ +N +MTLY G EK+ +++E+K + PD +TYN
Sbjct: 124 LIEKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYN 183
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER---ALKE 117
+W+ + AA +I R+++EM +D V DW + + +IYV AG AE A+ E
Sbjct: 184 LWISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVE 243
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
E + R+ Y FL+ LY G ++ +IW+SLR+ + +++ ++ + L
Sbjct: 244 AEKKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGH 303
Query: 178 LPGAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENA 216
L + +W+ T +DI N ++ A + G E A
Sbjct: 304 LKEVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIA 343
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 158/348 (45%), Gaps = 8/348 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ KA +L+ MKE NL ++ FN L LYA + IP I++EM+ I P+ TYN
Sbjct: 123 LLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYN 182
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A D G ER+ +MK DG + LAS YV AG EKA LKE
Sbjct: 183 ILIGIKAKKGDTEGMERLFSKMKCDGDGTPNGEILCTLASGYVNAGDHEKAMAYLKEAVA 242
Query: 121 RNAHRD-LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ R+ + +I LY G + RIWR R FP + SY+ I + +
Sbjct: 243 SDEFRESRRVHDKVIALYAAMGRADMIDRIWRFTR-RFPVVSANSYVATIAAYEKVGRID 301
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AEK F E + AY + G + AE+L ER R N ++
Sbjct: 302 RAEKVFAELTEKRTLLRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLV 361
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y+++G+ K+A + L + + + P +T+ ++ + DV+ AE + +
Sbjct: 362 AGYMKSGNPKMAAETLTRMFEE------RVPPCFDTVMLILKEHAKNADVNSAELLFQDM 415
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
++ + V + L+ Y AG+ + L+R+ +KV + + +LL
Sbjct: 416 RRESYNKNVAAYNSLLEAYVNAGKHAYRFLQRMATDKVAPNARTFELL 463
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 2/221 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+TEKAE L +++K+ NL F ++ +N +MTLY G EK+P +++E+K + PD +TYN
Sbjct: 165 LTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYN 224
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-ERALKELE 119
+W+ + AA+ +I R+++EM W + NLA+IY+ + A L E E
Sbjct: 225 LWISSCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETE 284
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R R Y FLI LYG G+ ++ +IW SL + + +Y+ +I + L
Sbjct: 285 KRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTK 344
Query: 180 GAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEEL 219
+ +W+ T +D+ ++ A+ G E A L
Sbjct: 345 EVGEVIDQWKQSTTTDFDMLACKKILVAFRDIGLAEIANNL 385
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 165/338 (48%), Gaps = 25/338 (7%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEA +KM+EL L P+N++M+LY EK+ +++EMK + + DS T N +
Sbjct: 148 KAEATFQKMRELGLLSRPSPYNAMMSLYIALNDREKVEELLREMKDNDVEADSITVNNVL 207
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK---ELEN 120
+ +AV D++ E+ + + + + +W T ++A Y+ A KA + L+ EL +
Sbjct: 208 KLYSAVCDVTAMEKFLNKWEGINGIKLEWLTTLDMAKAYLRARSNGKAIKMLRLTEELAD 267
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R + + SAY L+ LYG+ GN EV RIW ++ N Y +I+ L+ + D+ G
Sbjct: 268 RKSLK--SAYDHLMKLYGEAGNREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFG 325
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL------KERARRRGADPNAKT 234
AE+ +K WES +DIR+ ++ Y + G E AE+L K+R + P +
Sbjct: 326 AEEIYKVWESLSLEFDIRIPTMLASGYRERGMTEKAEKLINSKTIKDRKMNKPVTPLLEQ 385
Query: 235 WEIFSDYYLRNGDMKLAVDCL------EKAIDTGRGDGGKWVPS--SETIRTFMRHFEQE 286
W D ++ D+K + L KA+ G K V SE + E
Sbjct: 386 W---GD-QMKPSDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAARLYLTENV 441
Query: 287 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
++ AE + E + + + D V V L+ +YA + +
Sbjct: 442 LGLEKAEKYFENIPENMKDYSVYV--ALLSSYAKSDKN 477
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 37/237 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE--- 80
++ LM LY + G+ E++ I K + D+ Y +R+L V+DI GAE + +
Sbjct: 275 YDHLMKLYGEAGNREEVLRIWNLYKMNIGQRDNKGYRTVIRSLLKVDDIFGAEEIYKVWE 334
Query: 81 --EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL--KELENRNAHRDLSAYQFLITL 136
++ D R+ + LAS Y E G+ EKAE+ + K +++R ++ ++ L+
Sbjct: 335 SLSLEFDIRIP------TMLASGYRERGMTEKAEKLINSKTIKDRKMNKPVTP---LLEQ 385
Query: 137 YGQTGNLSEVYRIWRSLRLA--FPNTANIS---------------YLNMIQVLVNLKDLP 179
+G S++ + ++LR + F +S Y + + N+ L
Sbjct: 386 WGDQMKPSDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAARLYLTENVLGLE 445
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR-LEN-AEELKERARRRGADPNAKT 234
AEK F+ Y + V ++ +YAK + LEN EE+ DP++ T
Sbjct: 446 KAEKYFENIPENMKDYSVYVA--LLSSYAKSDKNLENMVEEILREMEENNVDPDSIT 500
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 1/176 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MTEKAE L +++K+ NL F ++ +N +MTLY G EK+P++++E+K ++ PD +TYN
Sbjct: 166 MTEKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYN 225
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-LFEKAERALKELE 119
+W+ + AA +I R+++EM WT + NLA++YV A L + +L E E
Sbjct: 226 LWISSCAATLNIDEVRRILDEMSHGADSNESWTRYLNLANVYVTASRLDNSSSNSLAETE 285
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 175
R Y FLI LY G+ ++ +IW SLR+ N +Y +I + L
Sbjct: 286 KRITQSQWITYDFLIILYAGLGSKDKLDQIWNSLRMTKQKMINRNYSCIISAYLML 341
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 157/354 (44%), Gaps = 20/354 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ KA +L+ MKE NL ++ FN L LYA + IP I++EM+ I P+ TYN
Sbjct: 123 LLSKARLVLKLMKEKNLLTTATAFNKLFHLYANKKKEDGIPVILREMRDMRISPNVETYN 182
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-- 118
+ + A D G ER+ +MK DG + LAS YV AG EKA LKE
Sbjct: 183 ILIGIKAKKGDTEGMERLFSKMKCDGDGTPNCEILCTLASGYVNAGDHEKAMAYLKEAVA 242
Query: 119 -----ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
E+R H +I LY G + RIWR R FP + SY+ I
Sbjct: 243 SEEFQESRRVHDK------VIALYAAMGRADMIDRIWRFTR-RFPVVSANSYVATIAAYE 295
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+ + AEK F E + AY + G + AE+L ER R N
Sbjct: 296 KVGRIDRAEKVFAELTEKRTLLRPAHYVPLFRAYCEGGEMGKAEKLLERIRHGNGHINNL 355
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
++ Y+++G+ K+A + L + + + P +T+ ++ + DV AE
Sbjct: 356 SYHHLVAGYMKSGNPKMAAETLNRMFEE------RVPPCFDTVMLILKEHAKNADVSSAE 409
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
+ +++ + V + L+ Y AG+ + L+R+ +KV + + +LL
Sbjct: 410 LLFQDMRRESYNKNVAAYNSLLEAYVNAGKHAYRFLQRMATDKVAPNARTFELL 463
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 151/304 (49%), Gaps = 15/304 (4%)
Query: 53 MPDSY----TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 108
MPD Y ++ A N + AE + E+M+ G A ++ + +Y++ G
Sbjct: 70 MPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMR--GMGMASSYAYNVMMRLYLQNGQV 127
Query: 109 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANI 163
E+ + +E D+S L+ + + L Y + ++ L N+ N
Sbjct: 128 ERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS 187
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
Y+ I VL+ + D+ GAEK ++EWES +D R+ N+++ AY KEG ++ AE L ++
Sbjct: 188 MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQF 247
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
++G P A T + Y + G + A D +KA+ + + W+P + + +F
Sbjct: 248 IKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASASNE---WIPDLTNVLMSLNYF 304
Query: 284 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 343
++K+V+ AE + +L++ V +++ L++TY AG+ +L R+K + +E E +
Sbjct: 305 AEQKNVEAAEEMMSLLQRLVTPTR-DIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEET 363
Query: 344 KKLL 347
+K+L
Sbjct: 364 EKIL 367
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 151/304 (49%), Gaps = 15/304 (4%)
Query: 53 MPDSY----TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 108
MPD Y ++ A N + AE + E+M+ G A ++ + +Y++ G
Sbjct: 39 MPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMR--GMGMASSYAYNVMMRLYLQNGQV 96
Query: 109 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANI 163
E+ + +E D+S L+ + + L Y + ++ L N+ N
Sbjct: 97 ERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS 156
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
Y+ I VL+ + D+ GAEK ++EWES +D R+ N+++ AY KEG ++ AE L ++
Sbjct: 157 MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQF 216
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
++G P A T + Y + G + A D +KA+ + + W+P + + +F
Sbjct: 217 IKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASASNE---WIPDLTNVLMSLNYF 273
Query: 284 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 343
++K+V+ AE + +L++ V +++ L++TY AG+ +L R+K + +E E +
Sbjct: 274 AEQKNVEAAEEMMSLLQRLVTPTR-DIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEET 332
Query: 344 KKLL 347
+K+L
Sbjct: 333 EKIL 336
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 151/304 (49%), Gaps = 15/304 (4%)
Query: 53 MPDSY----TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 108
MPD Y ++ A N + AE + E+M+ G A ++ + +Y++ G
Sbjct: 98 MPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMR--GMGMASSYAYNVMMRLYLQNGQV 155
Query: 109 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANI 163
E+ + +E D+S L+ + + L Y + ++ L N+ N
Sbjct: 156 ERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS 215
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
Y+ I VL+ + D+ GAEK ++EWES +D R+ N+++ AY KEG ++ AE L ++
Sbjct: 216 MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQF 275
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
++G P A T + Y + G + A D +KA+ + + W+P + + +F
Sbjct: 276 IKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASASNE---WIPDLTNVLMSLNYF 332
Query: 284 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 343
++K+V+ AE + +L++ V +++ L++TY AG+ +L R+K + +E E +
Sbjct: 333 AEQKNVEAAEEMMSLLQRLVTPTR-DIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEET 391
Query: 344 KKLL 347
+K+L
Sbjct: 392 EKIL 395
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 151/304 (49%), Gaps = 15/304 (4%)
Query: 53 MPDSY----TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 108
MPD Y ++ A N + AE + E+M+ G A ++ + +Y++ G
Sbjct: 149 MPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMR--GMGMASSYAYNVMMRLYLQNGQV 206
Query: 109 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANI 163
E+ + +E D+S L+ + + L Y + ++ L N+ N
Sbjct: 207 ERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS 266
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
Y+ I VL+ + D+ GAEK ++EWES +D R+ N+++ AY KEG ++ AE L ++
Sbjct: 267 MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQF 326
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
++G P A T + Y + G + A D +KA+ + +W+P + + +F
Sbjct: 327 IKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASA---SNEWIPDLTNVLMSLNYF 383
Query: 284 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 343
++K+V+ AE + +L++ V +++ L++TY AG+ +L R+K + +E E +
Sbjct: 384 AEQKNVEAAEEMMSLLQRLVTPTR-DIYHGLLKTYVNAGKPVSDLLHRMKKDGMEADEET 442
Query: 344 KKLL 347
+K+L
Sbjct: 443 EKIL 446
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 131/260 (50%), Gaps = 2/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+E MKE + + +N +M +Y + K+ ++ EM+ + + D +T ++
Sbjct: 154 EKAAKLVEAMKEAGVSMDTRCYNLMMNMYYQMNVHGKLDDLMLEMEQNGVSFDQFTLSIR 213
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-R 121
+ A AA ++I G E+ IE++ A DWT +S A+ +++ L ++A LK+ E
Sbjct: 214 LSAYAAASNIEGIEKTIEKISSMSETAIDWTIYSAAANAFLKVELIDEATMMLKKCEEFV 273
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N A+ L+ LYG+TG ++ R+W + N Y MI + D+
Sbjct: 274 NEDSGNEAFHTLLKLYGETGRKEDLSRVWLRFKEE-RKVFNSGYKIMISSALKFGDIELV 332
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK F +WES +YD R+ N++I Y ++ E AE L ++A P + ++
Sbjct: 333 EKVFNQWESEKLSYDFRIPNLLINFYCEKDLTEKAELLLKKAEGNRVSPPMDAYICLANI 392
Query: 242 YLRNGDMKLAVDCLEKAIDT 261
YL ++ A + +E+A+ T
Sbjct: 393 YLEGDEISKATEAIERAVST 412
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 161/333 (48%), Gaps = 15/333 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEA +KM++L L +P+N++M+LY+ + EK+ ++ EMK + + D+ T N +
Sbjct: 156 KAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVL 215
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ +AV D++ E+ + + + + +W T ++A Y+ A KA + L+ E
Sbjct: 216 KLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVD 275
Query: 124 HRDL-SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ L SAY L+ LYG+ GN EV R+W+ + N Y +I+ L+ + D+ GAE
Sbjct: 276 QKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAE 335
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL---KERARRRGADPNAKTWEIFS 239
+ +K WES +D R+ ++ Y G E AE+L K RR P E +
Sbjct: 336 EIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNKPVTPLLEQWG 395
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRG-DGGKWVPSSETIRTFMRHF-------EQEKDVDG 291
D ++ D+K + L + + +W+ + ++ + E ++
Sbjct: 396 D-QMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEE 454
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
AE + E + + + D V V L+ +YA + +
Sbjct: 455 AEKYFENIPENMKDYSVYV--ALLSSYAKSDKN 485
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 150/304 (49%), Gaps = 15/304 (4%)
Query: 53 MPDSY----TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 108
MPD Y ++ A N + AE + E+M+ G A ++ + +Y++ G
Sbjct: 177 MPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMR--GMGMASSYAYNVMMRLYLQNGQV 234
Query: 109 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-----LAFPNTANI 163
E+ + +E D+S L+ + + L Y + ++ L N+ N
Sbjct: 235 ERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKTLVAAYVVAEDIKAIENVLEKANSCNS 294
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
Y+ I VL+ + D+ GAEK ++EWES +D R+ N+++ AY KEG ++ AE L ++
Sbjct: 295 MYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQF 354
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
++G P A T + Y + G + A D +KA+ + +W+P + + +F
Sbjct: 355 IKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASA---SNEWIPDLTNVLMSLNYF 411
Query: 284 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 343
++K+V+ AE +L++ + +++ L++TY AG+ +L R+K + +E E +
Sbjct: 412 AEQKNVEAAEEMASLLQRLITPTR-DIYHGLLKTYVNAGKPVSDLLDRMKKDGMEADEET 470
Query: 344 KKLL 347
+K+L
Sbjct: 471 EKIL 474
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 115/222 (51%), Gaps = 1/222 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KAE L ++MK+ +L + +N +MTLY G +K+P + +E+K ++ PD +TYN
Sbjct: 181 MIDKAERLFQRMKDADLPIDVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYN 240
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A D+ + +++EM +D W + NLASIYV+A + +L E E
Sbjct: 241 LRISASVASMDLEAFKGILDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEA 300
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + R+ Y L+ L+ GNL V IW+S+++ + +Y+ ++ + L
Sbjct: 301 KISQREWITYDLLVILHAGLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKD 360
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A + +W+ S +D+ N + A G + A+ +E
Sbjct: 361 AAEVVDQWQRSKVPEFDVSACNRLFDALLAAGFTDTADSFRE 402
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 161/333 (48%), Gaps = 15/333 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEA +KM++L L +P+N++M+LY+ + EK+ ++ EMK + + D+ T N +
Sbjct: 156 KAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVL 215
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ +AV D++ E+ + + + + +W T ++A Y+ A KA + L+ E
Sbjct: 216 KLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVD 275
Query: 124 HRDL-SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ L SAY L+ LYG+ GN EV R+W+ + N Y +I+ L+ + D+ GAE
Sbjct: 276 QKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAE 335
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL---KERARRRGADPNAKTWEIFS 239
+ +K WES +D R+ ++ Y G E AE+L K RR P E +
Sbjct: 336 EIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNKPVTPLLEQWG 395
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRG-DGGKWVPSSETIRTFMRHF-------EQEKDVDG 291
D ++ D+K + L + + +W+ + ++ + E ++
Sbjct: 396 D-QMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEE 454
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
AE + E + + + D V V L+ +YA + +
Sbjct: 455 AEKYFENIPENMKDYSVYV--ALLSSYAKSDKN 485
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 1/222 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KAE L ++MK+ +L + +N +MTLY G +K+P + +E+K ++ PD +TYN
Sbjct: 181 MIDKAERLFQRMKDADLPIDVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYN 240
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A D+ + +++EM +D W + NLASIYV+A + +L E E
Sbjct: 241 LRISASVASMDLEAFKGILDEMSKDPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEA 300
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + R+ Y L+ L+ GNL V IW+S+++ + +Y+ ++ + L
Sbjct: 301 KISQREWITYDLLVILHAGLGNLDRVKDIWKSMQMTAQRMTSRNYVCVLSAYLMCGQLKD 360
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A +W+ S +D+ N + A G + A+ +E
Sbjct: 361 AAGVVDQWQRSKVPEFDVSACNRLFDALLAAGFTDTADSFRE 402
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 121/220 (55%), Gaps = 9/220 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPE--KIPAIIQEMKASSIMPDSYTYN 60
+KAE+ +KM+EL L + P+NS+ +LY + H K+ I++EMK S+I D T N
Sbjct: 143 DKAESTFKKMRELGLLLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLDRDTVN 202
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+R A V I+ E+ + E +G DW T ++A Y+ +G KA+ L+ E
Sbjct: 203 NALRVYADVTHIATMEKFLAEW--EGNTPLDWLTRLDMAKAYLRSGFKGKAKEMLRRTEE 260
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
RD +Y+ L+ LYG+ G +VYR+W L N + +I L+ L D+ G
Sbjct: 261 ---LRDPKSYEELMRLYGEAGGRKDVYRVW-DLYKKLSKKDNEGFRALIGSLLKLDDING 316
Query: 181 AEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
AE+ + KEWE +D+R+ +++ +Y ++G +E A++L
Sbjct: 317 AEEFYYKEWECSGLPFDVRIPTMLVSSYREKGMVEKADKL 356
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+ EKM +L PFNS+++LY++ G EK+ +I +MK +I PDS T N
Sbjct: 474 DKAEAIFEKMGDLGFLSKPSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNNV 533
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R A DI + +++ KR+ + A+ T + ++ A +E+A LK +E
Sbjct: 534 LRMYADETDI----KTMDKYKREW-INAEKNTKLEMRTMVAMANAYERAGLLLKAIE--- 585
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIW--------RSLRLAFPNTANI-------SYLN 167
T + +EV+R+W R+ ++ N Y +
Sbjct: 586 ----------------ITRSKNEVHRLWNEYKEKEKRNYKIDDANLCKCRSAVGDEEYQS 629
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
+I L+ L DL GAE+ + EWE ++ R+ ++I Y KEG
Sbjct: 630 VISSLLKLDDLKGAEEIYGEWEPEGPEFNTRIPCLIISRYCKEG 673
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
Query: 2 TEKAEALLEKMKELN-LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
TE+AEAL +++ E + L F ++ +N +MTLY G EK+P +IQ +K + PD +TYN
Sbjct: 173 TERAEALFKRIIETDSLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYN 232
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK-ELE 119
+W+ + AA +I R++EEM+ D W + NL SIY+ + AE E E
Sbjct: 233 LWLSSCAATFNIDELRRILEEMRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAE 292
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ R+ Y FL+ L+ GN + +IW+SL ++ SY+ ++ + L L
Sbjct: 293 KSISQREWITYDFLMILHTGLGNKVMIDQIWKSLGNTNQKLSSRSYICVLSSYLMLGHLR 352
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEG 211
AE+ +W ES +D ++ A+ G
Sbjct: 353 EAEEIIHQWKESKTTEFDASACLRILNAFRDVG 385
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 8/349 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAE + +KMK ++ +N L+ LY + +KI +++ M+ + P +TY +
Sbjct: 247 VEKAEEIFKKMKAEGFSLTAFEYNQLLLLYKRLD-KKKIQDVLKMMEDEGVKPTIFTYKI 305
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + DI G E+V E MK + + D T LA Y+ AGL EKAE LKELEN
Sbjct: 306 LIDVKGWMGDIGGMEQVAENMKSED-IEMDSGTLELLARHYIRAGLAEKAEVVLKELENV 364
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ S + L+ LY + G +EV RIW+ AFP Y + L + A
Sbjct: 365 SLKDKRSRLKMLLPLYAELGKPTEVERIWKDFE-AFPALRLDEYATGVVAWGKLGQIEKA 423
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F++ + + N ++ YA L +EL +R G W+
Sbjct: 424 EITFEKLLNSGKKLSAKHYNALLNVYADHHLLLKGKELVKRMSDNGCTIEPPIWDALIRL 483
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
++ G+++ A L KA + + W T+ T + + + DV AE + +++
Sbjct: 484 HVNAGELEKADSILFKACNQKQLRPKYW-----TMVTILEKYAERGDVANAEKIFDRMRQ 538
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
A F L+++YA A + R+K +K+ ++ L+E +
Sbjct: 539 AGYTGSAGAFASLLKSYANARVPAYGFRERMKADKIYLNGRLNSLMEQV 587
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 9/189 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTY 59
+ EKAE +L++++ ++L L+ LYA+ G P ++ I ++ +A ++ D Y
Sbjct: 350 LAEKAEVVLKELENVSLKDKRSRLKMLLPLYAELGKPTEVERIWKDFEAFPALRLDEYAT 409
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
V A + I AE E++ G+ + ++ L ++Y + L K + +K +
Sbjct: 410 GV--VAWGKLGQIEKAEITFEKLLNSGKKLSA-KHYNALLNVYADHHLLLKGKELVKRMS 466
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL---VNLK 176
+ + + LI L+ G L + I + Y M+ +L
Sbjct: 467 DNGCTIEPPIWDALIRLHVNAGELEKADSIL--FKACNQKQLRPKYWTMVTILEKYAERG 524
Query: 177 DLPGAEKCF 185
D+ AEK F
Sbjct: 525 DVANAEKIF 533
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 155/325 (47%), Gaps = 3/325 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++KM+EL S + FN L+ L++ G + IP I+ +MKA ++ TYN+ M+ A
Sbjct: 176 MKKMRELGHPISHLIFNRLIILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEAN 235
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+++ G +V EMKR V + +F LA + A L+ AE ++ +E + S
Sbjct: 236 EHNVEGLIKVFGEMKRL-EVEPNEVSFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNWS 294
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI LYG ++ RIW +++ P+ + SY+ I+ + L AE+ + E
Sbjct: 295 TLDVLIILYGYLRKGKKLDRIWGTVK-ELPHVRSKSYILAIEAFGRIGQLGRAEELWLEM 353
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+S N M+ Y K G ++ A ++ R G PNA T+ + L+ +
Sbjct: 354 KSLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELV 413
Query: 249 KLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
+ A+ LE +D + K +P ET + + F ++ DV AE F E L KA
Sbjct: 414 EEALKTLEMGMDFTTSNKIKNSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARY 473
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRL 332
V+ LI+ Y A P +LRR+
Sbjct: 474 TFVYNTLIKAYVKAKVYVPYLLRRM 498
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L +MK L S+ FNS++++Y K G +K I +EM + P++ T+
Sbjct: 345 RAEELWLEMKSLKGLKSTEQFNSMLSIYCKCGLVKKATDIFREMDRNGCKPNAITFRHLA 404
Query: 64 RALAAVNDISGAERVIE---EMKRDGRV--AADW--TTFSNLASIYVEAGLFEKAERALK 116
+ A + +E + ++ + W TTFS + I+ E G AE+ +
Sbjct: 405 LGCLKAELVEEALKTLEMGMDFTTSNKIKNSIPWLETTFS-IVEIFAEKGDVANAEKFFE 463
Query: 117 ELENRNAHRDLSAYQFLITLY 137
EL R Y LI Y
Sbjct: 464 ELHKAKYARYTFVYNTLIKAY 484
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 3/213 (1%)
Query: 2 TEKAEALLEKMKELN-LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
TE+AEAL +++ E + L F ++ +N +MTLY G EK+P +I+ +K + PD +TYN
Sbjct: 165 TERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYN 224
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK-ELE 119
+W+ + AA +I +++EEM+ D W + +L SIY+ + AE L E E
Sbjct: 225 LWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAE 284
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ R+ Y FL+ L+ GN + +IW+SLR ++ SY+ ++ + L L
Sbjct: 285 KSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLR 344
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEG 211
AE+ +W ES +D ++ A+ G
Sbjct: 345 EAEEIIHQWKESKTTEFDASACLRILNAFRDVG 377
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 3/213 (1%)
Query: 2 TEKAEALLEKMKELN-LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
TE+AEAL +++ E + L F ++ +N +MTLY G EK+P +I+ +K + PD +TYN
Sbjct: 172 TERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYN 231
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK-ELE 119
+W+ + AA +I +++EEM+ D W + +L SIY+ + AE L E E
Sbjct: 232 LWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAE 291
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ R+ Y FL+ L+ GN + +IW+SLR ++ SY+ ++ + L L
Sbjct: 292 KSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLR 351
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEG 211
AE+ +W ES +D ++ A+ G
Sbjct: 352 EAEEIIHQWKESKTTEFDASACLRILNAFRDVG 384
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 3/213 (1%)
Query: 2 TEKAEALLEKMKELN-LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
TE+AEAL +++ E + L F ++ +N +MTLY G EK+P +I+ +K + PD +TYN
Sbjct: 172 TERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYN 231
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK-ELE 119
+W+ + AA +I +++EEM+ D W + +L SIY+ + AE L E E
Sbjct: 232 LWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAE 291
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ R+ Y FL+ L+ GN + +IW+SLR ++ SY+ ++ + L L
Sbjct: 292 KSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLR 351
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEG 211
AE+ +W ES +D ++ A+ G
Sbjct: 352 EAEEIIHQWKESKTTEFDASACLRILNAFRDVG 384
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+LE+M + ++PFN +M+LY +G EK+P +I+E++ +I PD TYN+W
Sbjct: 146 DKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTI-PDLVTYNIW 204
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + N + AE+V + MK D RV DW TFS L SIY+ AGL K AL E+E R
Sbjct: 205 LTYCSKKNSVKAAEKVYDLMK-DERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRA 263
Query: 123 AHRDLSAYQFLITLYG 138
+ ++ +AY L+TLY
Sbjct: 264 SRKERAAYSSLLTLYA 279
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 155/329 (47%), Gaps = 11/329 (3%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++KM+EL S + FN L+ L++ G + IP ++ +MKA + P TYN+ M+ A
Sbjct: 162 MKKMRELGFPISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEAN 221
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+++ +V MK +V + ++ LA + A L+ E ++ +E + S
Sbjct: 222 EHNLENLVKVFGRMK-VAQVEPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWS 280
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
L+ LYG GN E+ R+W +++ P+ + SY+ I+ + L AE+ + E
Sbjct: 281 TLDVLLMLYGYLGNQKELERVWATIQ-ELPSIRSKSYMLAIEAFGRIGQLNRAEEIWLEM 339
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+S + N M+ Y K G ++ A +L + + G PNA T+ + L++G
Sbjct: 340 KSTKGLKSVEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQLALGCLKSGMA 399
Query: 249 KLAVDCLEKAIDTG-RGDGGKWV----PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ A+ K +D G R K V P ET + + F ++ DV E E KA
Sbjct: 400 EQAL----KTLDLGLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHKAK 455
Query: 304 DDLGVEVFEPLIRTYAAAGRTSPVMLRRL 332
V+ LI+ Y A +P +L+R+
Sbjct: 456 YCRYTFVYNTLIKAYVKAKIYNPNLLKRM 484
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA + KMK+L L + +N L+ LY K +KI ++ M+ ++ P +TY +
Sbjct: 121 AKKAVEVFNKMKDLELPITLFSYNQLLLLY-KRHDKKKIADVLLSMEKENVKPSLFTYIL 179
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ NDI+G E++ E MK +G + D T + +A YV GL EKAE LKE+E
Sbjct: 180 LIDTKGQSNDIAGMEQIAETMKAEG-IEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGG 238
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N A QF++ LYG G EV R+W+ + + P + I+ LK +P A
Sbjct: 239 NLEEHRWACQFMLPLYGTLGKADEVSRLWKFCKKS-PRLDEC--MAAIEAWGQLKKIPEA 295
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F+ + + ++ YA L ++L ++ G TW+
Sbjct: 296 EAVFELMSKTWKKLSSKHYSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKL 355
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+ G+++ A L KA+ + P + M + ++ D+ AE +++
Sbjct: 356 YVEAGEVEKADSILNKAVQQNQMK-----PMFSSYMIIMEKYAKKGDIHNAEKMFHRMRQ 410
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLK 333
A + F+ LI+ Y A M RLK
Sbjct: 411 AGYQARSKQFQTLIQAYINAKAPCYGMRERLK 442
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 150/325 (46%), Gaps = 3/325 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++KM+EL S + FN L+ L++ G + IP ++ +MKA + P TYN+ M+ A
Sbjct: 162 MKKMRELGFLISHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEAN 221
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+++ + MK +VA + ++ LA + A L+ E ++ +E + S
Sbjct: 222 EHNLENLVKFFSRMK-VAQVAPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNNWS 280
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
L+ LYG GN E+ R+W ++R P+ + SY+ I+ + L AE+ + E
Sbjct: 281 TLDVLLMLYGYLGNQKELERVWATIR-ELPSVRSKSYMLAIEAFGRIGQLNQAEELWLEM 339
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
ES + N M+ Y K G + A +L + + G PNA T+ + L++G
Sbjct: 340 ESTKGLKSVEQFNSMMSVYCKHGFIGKAAKLYKNMKASGCKPNAITYRQLALGCLKSGMA 399
Query: 249 KLAVDCLEKAID-TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
+ + L+ + T +P ET + + F ++ D+ E E K+
Sbjct: 400 EQGLKTLDLGLRLTISKRVRNSIPWLETTLSIVEIFAEKGDMGNVERLFEEFHKSKYCRY 459
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRL 332
V+ LI+ Y A P +L+R+
Sbjct: 460 TFVYNTLIKAYVKAKIYDPNLLKRM 484
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 154/331 (46%), Gaps = 11/331 (3%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A ++KM+EL S + FN L+ L++ + IP I+ +MKA + TYN+ M+
Sbjct: 203 AYMKKMRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIE 262
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A ++I G +V EMK+ +V + ++ LA+ + A L+ AE ++ +E +
Sbjct: 263 ANEHNIEGLVKVFGEMKQQ-QVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNN 321
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
S LI LYG G +++ R W ++ P+ + SY+ I+ + L AE+ +
Sbjct: 322 WSTLDVLIILYGYLGKPTDLERTWGIVQ-ELPHVRSKSYMLAIEAFGRIGQLNRAEELWL 380
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E +S N MI Y+K G ++ A L G NA T+ + L+ G
Sbjct: 381 EIKSKKELKSTEQFNSMISVYSKHGFIDKASGLFREMEMNGCKANAITYRNLALGCLKAG 440
Query: 247 DMKLAVDCLEKAIDTGRGDG-----GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
++ A+ LE G+G K +P ET + + F + DV+ AE E LK
Sbjct: 441 LLEEALKTLE----LGKGLTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKT 496
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRL 332
A V+ LI+ Y A P +LRR+
Sbjct: 497 ANYTRYTFVYNTLIKAYVKAKVYDPNLLRRM 527
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 150/325 (46%), Gaps = 3/325 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++KM+E S + FN L+ L++ G + IP I+ +M+A ++P TYN+ M+ A
Sbjct: 180 MKKMREQGHPISYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEAN 239
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
++I G +V +MKR +V + +F LA+ + A L+ AE ++ +E + + S
Sbjct: 240 EHNIDGLVKVFNDMKR-FKVEPNEVSFCILATAHAAARLYTVAEAYVEAVEKSCSGDNWS 298
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI LYG G E+ R W + L P+ + SY+ I+ + L AE+ + E
Sbjct: 299 TLDVLIILYGHLGKEKELERTW-GIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWLEM 357
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+S N M+ Y K G ++ A G N+ T+ + L+ +
Sbjct: 358 KSIHGLRSTEQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKANLV 417
Query: 249 KLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
+ A+ LE + + K P ET + + F ++ DV E E L KA
Sbjct: 418 EEALKTLEMGKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEKLFEELAKAKYIRH 477
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRL 332
VF LI+ Y A SP +LRR+
Sbjct: 478 TFVFNILIKAYVKAKIYSPNLLRRM 502
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 18/340 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + KM++L + N L+ LY + +KI ++ M+ ++ P +TY +
Sbjct: 204 VKKAEEVFNKMRDLEFPITPFACNQLLLLYKRLDK-KKIADVLLLMEKENVKPSLFTYKI 262
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ND++G ++++E MK +G + D T + +A YV GL EKAE LKE+E
Sbjct: 263 LIDTKGQSNDMTGMDQIVETMKAEG-IEPDIRTQAIMARHYVSGGLKEKAEAILKEMEGG 321
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW----RSLRLAFPNTANISYLNMIQVLVNLKD 177
N A +F++ LYG G EV R+W +S RL + I+ LK
Sbjct: 322 NLEEHRWACRFMLPLYGALGKADEVSRVWKFCEKSPRLD-------ECMAAIEAWGRLKK 374
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ AE F+ R + ++ YA L ++L +R G TW+
Sbjct: 375 IDEAEAVFELMSKTWKKLSSRHYSTLLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDA 434
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y+ G+++ A L KA+ K P + M + + D+ AE
Sbjct: 435 LVKLYVEAGEVEKADSILNKAVQQ-----NKIKPMYSSFLIIMERYATKGDIHNAEKMFH 489
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+++A + F+ LI+ Y A M RLK + +
Sbjct: 490 RMRQAGYQARIRQFQTLIQAYIIAKAPCYGMRERLKADGI 529
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 153/328 (46%), Gaps = 4/328 (1%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A + KM+E+ S + FN L+ L++ + IP I+ +MKA + TYN+ M+
Sbjct: 179 AYMRKMREVGHSISHLVFNRLIILHSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIE 238
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A ++I G RV +M+R +V + ++ +A+ + A L+ E ++ LE A +
Sbjct: 239 ANEHNIEGLMRVFSDMRR-AKVEPNEVSYCIVATAHAVAKLYTVVEAYVEALEKSIAGNN 297
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
S Y LI LYG E+ R W ++ FP+ + S++ I+ + L AE+ +
Sbjct: 298 WSTYDVLIILYGYLNKEKELERTWGIIQ-GFPHIPSKSFILAIEAFGRIGLLSRAEELWL 356
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E ++ N ++ Y + G ++ A E+ + G PNA T+ + L+ G
Sbjct: 357 EMKTKRGIKATDQFNSILSVYCRHGLIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAG 416
Query: 247 DMKLAVDCLEKAIDTGRGDG--GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
++ A+ L+ +T K P ET + + + D++ E + LK+A
Sbjct: 417 LVEEALKTLDLGSNTTSSTKIVRKSTPWLETTLSMIEILAERGDIENTEKLFKELKEAKY 476
Query: 305 DLGVEVFEPLIRTYAAAGRTSPVMLRRL 332
V+ LI+ Y A +P +LRR+
Sbjct: 477 TRYTFVYNTLIKAYVKAKIHNPNLLRRM 504
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 147/336 (43%), Gaps = 10/336 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + KMK+L + + ++ LY + K+ I+ M+ ++ P +TY +
Sbjct: 253 VKKAEEVFNKMKDLEFPMTPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKI 311
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A NDISG E+V++ MK +G + D +T S LA YV GL +KA+ LK++E
Sbjct: 312 LIDAKGLCNDISGMEQVVDSMKAEG-IKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEEN 370
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N+ + L+ LYG EV R+W ++ N + I LK++ A
Sbjct: 371 NSKGSRLPCRILLPLYGALQMEDEVRRLW---KICEANPHMEESMAAIVAWGKLKNVQEA 427
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK F + R N M+ Y L +EL + G + TW+
Sbjct: 428 EKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKL 487
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+ G+++ A L KA+ + P T T M + DV E ++++
Sbjct: 488 YVEAGEVEKADSFLVKAVLQNKKK-----PMFTTYITLMDRYASRGDVPNVEKNFAMMRR 542
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ F+ LI+ Y A + M R+K + V
Sbjct: 543 LGYVGRLSQFQTLIQAYVNAKAPAYGMRERMKADNV 578
>gi|297729251|ref|NP_001176989.1| Os12g0531500 [Oryza sativa Japonica Group]
gi|255670362|dbj|BAH95717.1| Os12g0531500 [Oryza sativa Japonica Group]
Length = 352
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 8/207 (3%)
Query: 141 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
GNL R+WR +R F ++ Y M+ L D+ AE + EWES T D R+
Sbjct: 138 GNLD---RVWRKMRETFRKFSDTEYKCMLTSLTRFGDIAEAESFYSEWESASGTRDSRIP 194
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N ++ Y K G +E AE + ++G P+ TWE+F YL +G M ++CL+KA+
Sbjct: 195 NTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECLKKALS 254
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
KW P+ + E++ D++ AE L + ++A + E++ ++RTYA
Sbjct: 255 CLE----KWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREA-GYVTTEIYNSVLRTYAK 309
Query: 321 AGRTSPVMLRRLKMEKVEVSEASKKLL 347
A ++ R+ +KV + + ++ LL
Sbjct: 310 AELMPLIVDERMDQDKVSMDDETRSLL 336
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 165/348 (47%), Gaps = 13/348 (3%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
+ KM+EL+L S +N L+ L++ G + IP I+ +MKAS + P + TYN+ ++ A
Sbjct: 172 MRKMRELSLPISPYVYNRLIILHSSEGRRKTIPKILAQMKASKVTPHTSTYNILLKIQAN 231
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
++I G RV +MKR +V + T+ LA + A L+ ++ ++ ++N + S
Sbjct: 232 EHNIDGVARVFNDMKR-AKVEPNEITYGILAISHAVARLYTVSQTYIEAIKNSMTGTNWS 290
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+ L+ LYG G E+ W+ +++ P+ + S+ I+ + + AE+ + E
Sbjct: 291 TQEILLILYGYLGKEKELKMTWKLMQV-LPHIRSKSFTLAIEAFGKIGSIEQAEEIWGEI 349
Query: 189 ESGCATYDIRVT---NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+S +R+T N M+ Y + G ++ A + + R G PNA T+ + L+
Sbjct: 350 KSA---RKLRLTEQFNSMLSVYCRHGVVDKASAVFKEMRASGCQPNAITYRHLALGCLKA 406
Query: 246 GDMKLAVDCLE---KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
G +K A++ ++ K + T + P ET + +F + D++ A+ L ++
Sbjct: 407 GLVKQALNTMDMGKKEVVTRKVRNS--TPWLETTHMLLENFAEIGDLENAKIVYAELNES 464
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
V+ L++ Y A P +R + + + LL I
Sbjct: 465 KYCRNSFVYNTLLKAYVKAKVYEPNFVRTMILRGAMPDAETHSLLRLI 512
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA-----------AVNDI 72
FNS++++Y + G +K A+ +EM+AS P++ TY R LA A+N +
Sbjct: 361 FNSMLSVYCRHGVVDKASAVFKEMRASGCQPNAITY----RHLALGCLKAGLVKQALNTM 416
Query: 73 SGAERVIEEMKRDGRVAADWT-TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
++ E + R R + W T L + E G E A+ EL R+ Y
Sbjct: 417 DMGKK--EVVTRKVRNSTPWLETTHMLLENFAEIGDLENAKIVYAELNESKYCRNSFVYN 474
Query: 132 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
L+ Y + + LR A P+ S L +I+
Sbjct: 475 TLLKAYVKAKVYEPNFVRTMILRGAMPDAETHSLLRLIE 513
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 158/334 (47%), Gaps = 17/334 (5%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A + KM+EL+L S +N L+ L++ G + I I+ +MKA ++P + TYN+ ++
Sbjct: 167 AYMRKMRELSLPISPYVYNRLIILHSSPGRRKTISKILSQMKADRVVPHTSTYNILLKIQ 226
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A ++I G RV MKR ++ + T+ LA + A L+ ++ +EN +
Sbjct: 227 ANEHNIDGLARVFNGMKR-AKIEPNEITYGILAIAHAVARLYTVCHTYVEAIENSMTGTN 285
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
S + L+ LYG G E+ R W ++ P+ + S+ I+ + + AEK
Sbjct: 286 WSTLEILLILYGYLGKEKELKRTWEIMQ-DLPHIRSKSFTLAIEAFGKVGSIDQAEKI-- 342
Query: 187 EWESGCATYDIRVT---NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
W +T + +T N M+ Y + G ++ A + + R G PNA T+ + L
Sbjct: 343 -WIHIKSTKKLSLTEQFNSMLSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCL 401
Query: 244 RNGDMKLAVDCLEKAIDTGRGD-GGKWVPSS----ETIRTFMRHFEQEKDVDGAEGFLEI 298
++G +K A++ ID G+ + K V SS ET + +F + D++ A+
Sbjct: 402 KSGLVKEALN----TIDMGKKEVVTKKVRSSTPWLETTHLLLENFAEIGDLENAKRLYSE 457
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRL 332
L ++ L V+ L++ Y A P + R +
Sbjct: 458 LNESKYSLNSFVYNTLLKAYVKAKVYEPDLSRTM 491
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 167/357 (46%), Gaps = 25/357 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPF--NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
+KAE L E+M + S PF N +M LY G K ++++ K ++ P+ +TY
Sbjct: 266 VKKAEGLFEEMDKAGF-LSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTY 324
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
NV + A D+ G E++ EEMK + D T++ L Y++AGL +KAE +L +E
Sbjct: 325 NVMLDLKAKAGDVEGMEKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRME 384
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R + +++++ YGQ G +S+V R+W+ ++ P S+L + + ++
Sbjct: 385 VGPFRRTKATFEYMMLAYGQLGLISDVERMWQKCKMV-PGDGFNSFLAFQRAMALAGEVQ 443
Query: 180 GAEKCFK---EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ FK +W+ T D++ N ++ AY K+G +EL+++ WE
Sbjct: 444 RVDSMFKHMDKWKRS-KTVDLKRHNNLLLAYYKKGMKCEIKELEKKMNEMDLRVTLVDWE 502
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
K + + A R D K + + R + ++ DV AE
Sbjct: 503 ------------KEPIKMSKAAKAVVRKDKEKEMAA----RKGLEEAVEKADVKAAESAF 546
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
E KA + V V+ L++ Y A + L+R+K E VE +E + LL+ + VE
Sbjct: 547 EKC-KAGNMAKVGVWNKLLKAYVNAQVPAYGFLQRMKAEGVEANEETHSLLKKLQVE 602
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 166/357 (46%), Gaps = 25/357 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPF--NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
+KAE L E+M + S PF N +M LY G K ++++ K ++ P+ +TY
Sbjct: 247 VKKAEGLFEEMDKAGF-LSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTY 305
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
NV + A D+ G E++ EEMK + D T++ L Y++AGL +KAE +L +E
Sbjct: 306 NVMLDLKAKAGDVEGMEKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRME 365
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R + +++++ YGQ G +S+V R+W+ ++ P S+L + + ++
Sbjct: 366 VGPFRRTKATFEYMMLAYGQLGLISDVERMWQKCKMV-PGDGFNSFLAFQRAMALAGEVQ 424
Query: 180 GAEKCFK---EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ FK +W+ T D++ N ++ AY K+G +EL+++ WE
Sbjct: 425 RVDSMFKHMDKWKRS-KTVDLKRHNNLLLAYYKKGMKCEIKELEKKMNEMDLRVTLVDWE 483
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
K + + A R D K + R + ++ DV AE
Sbjct: 484 ------------KEPIKMSKAAKAVVRKDKEKETAA----RKGLEEAVEKADVKAAESAF 527
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
E KA + V V+ L++ Y A + L+R+K E VE +E + LL+ + VE
Sbjct: 528 EKC-KAGNMAKVGVWNKLLKAYVNAQVPAYGFLQRMKAEGVEANEETHSLLKKLQVE 583
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 135/296 (45%), Gaps = 10/296 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + KMK+L + + ++ LY + K+ I+ M+ ++ P +TY +
Sbjct: 257 VKKAEEVFNKMKDLEFPMTPFAHDQMLILYKRIDK-RKLADILSLMEKENVKPSPFTYKI 315
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A NDISG E+V++ MK +G + D +T S LA YV GL +KA+ LK++E
Sbjct: 316 LIDAKGLCNDISGMEQVVDSMKAEG-IKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEEN 374
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N+ + L+ LYG EV R+W ++ N + I LK++ A
Sbjct: 375 NSKGSRLPCRILLPLYGALQMEDEVRRLW---KICEANPHMEESMAAIVAWGKLKNVQEA 431
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK F + R N M+ Y L +EL + G + TW+
Sbjct: 432 EKIFDRFVKTWKKPSTRHYNTMMNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKL 491
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y+ G+++ A L KA+ + G K P + +T M H+ + DV AE +
Sbjct: 492 YVEAGEVEKADSFLVKAV---QKYGMK--PLFTSYKTLMDHYARRGDVHNAEKIFD 542
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 10/347 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K+E + +MK+L + FN L+ LY + +KI ++ M+ + P +TY +
Sbjct: 271 KKSEQVFNRMKDLGFPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKIL 329
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +V DI E+VIE M++D + D T + +A Y+ G EKAE LK +E +
Sbjct: 330 VDAKGSVGDIEAMEKVIESMEKDS-IEPDLTFNATIARHYIFYGQREKAEALLKAMEGDD 388
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ +A + L+ L+ GN V RIW++ NT ++ I+ L D+ AE
Sbjct: 389 IQKNRAACKTLLPLHAFLGNSDAVERIWKACE---DNTRVAESVSAIEAFGKLGDVEKAE 445
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F++ T + N ++ YA L+ +EL +R A T + Y
Sbjct: 446 KVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLY 505
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G+++ A + K P T T + + ++ DV +E L+++
Sbjct: 506 VEAGEVEKAESLVHKL-----SIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQS 560
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 349
+ +++ L+ Y A + R+K + + + A L+ A
Sbjct: 561 GYTGRIRMYQSLLHAYVHAKAPAYGFRERMKADNIFPNSAVSTLIAA 607
>gi|413947980|gb|AFW80629.1| hypothetical protein ZEAMMB73_384852 [Zea mays]
Length = 184
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
M+ L L D+ ++ + EWES T+D+++TN+MI ++ K G E AE L E+ + G
Sbjct: 1 MLHALYKLNDIDRMKQIYMEWESNYETFDVKLTNMMIRSHLKVGMTEEAEMLVEKVKENG 60
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
A+ + KT E+F D+Y+ DM A++ LE + + I F ++FE+ K
Sbjct: 61 AEFDTKTCELFLDHYMGTEDMNSALNWLENMTKLSKKAEK---LDQDRIYKFQKYFEEHK 117
Query: 288 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
D DGAE F L + + + + +E L+RTY AAG+ S + +++K +KVE+ KLL
Sbjct: 118 DADGAERFCNCL-RTLGCIDGKAYESLLRTYLAAGKKSCSLRQQIKNDKVEICYDIGKLL 176
Query: 348 EAI 350
+ +
Sbjct: 177 KRL 179
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 12/233 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT++AE L E+MK+ +L ++ +N +MTLY G K+ A+ +E+K ++ PD +TYN
Sbjct: 170 MTDRAERLFERMKDASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYN 229
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAAD--WTTFSNLASIYVEAG--LFEKAERALK 116
+ A AA D+ G V++EM RD + + + W + +LAS+YV+AG L ++
Sbjct: 230 LRASAAAASMDLEGFRAVLDEMSRDPKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVE 289
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-------RLAFPNTANISYLNMI 169
E R + R+ Y FL+ L+ G + IWRS+ + +Y+ ++
Sbjct: 290 AGEARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQQQQRMTSRNYVCVV 349
Query: 170 QVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+ L A + +W+ S +D+ N ++ A + G + A +E
Sbjct: 350 SSYLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRE 402
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 19/340 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + KMK+L+L + N L+ LY K +KI ++ M+ I P ++Y++
Sbjct: 230 VKKAEEVFSKMKDLDLPITVFTCNELLFLY-KRNDKKKIADLLLLMENEKIKPSRHSYSI 288
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ DI G +++++ MK G + D T + LA Y+ AGL +K E LK++E
Sbjct: 289 LIDTKGQSKDIGGMDQIVDRMKAQG-IEPDINTQAVLARHYISAGLQDKVETLLKQMEGE 347
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N ++ + L+ LY G + EV RIW ++ N L I+ L + A
Sbjct: 348 NLKQNRWLCRILLPLYANLGKVDEVGRIW---KVCETNPRYDECLGAIEAWGKLNKIDEA 404
Query: 182 EKCF----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
EK F K+W+ T ++++ YA L ++L +R G TW+
Sbjct: 405 EKVFEMMVKKWKLSSKT-----CSILLKVYANNEMLMKGKDLMKRIGDGGCRIGPLTWDT 459
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y++ G+++ A L+KA + P T T + + + D+ +E
Sbjct: 460 IVKLYVQTGEVEKADSVLQKA-----AQQSQMKPMFSTYLTILEQYAKRGDIHNSEKIFL 514
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+K+A ++++ L+ Y A + + RLK + +
Sbjct: 515 RMKQADYTSKAKMYQVLMNAYINAKVPAYGIRDRLKADSI 554
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM-PDSYTY 59
M K + L++++ + + +++++ LY +TG EK +++Q+ S M P TY
Sbjct: 434 MLMKGKDLMKRIGDGGCRIGPLTWDTIVKLYVQTGEVEKADSVLQKAAQQSQMKPMFSTY 493
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
+ A DI +E++ MK+ AD+T+ + + + + A
Sbjct: 494 LTILEQYAKRGDIHNSEKIFLRMKQ-----ADYTSKAKMYQVLMNA 534
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 155/340 (45%), Gaps = 18/340 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAE + K+K+L S +N ++ LY K KI ++ M+ +I P +TY +
Sbjct: 259 VEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKI 317
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ NDISG E+V++ MK +G + D +T S LA YV GL KA+ LKE+E
Sbjct: 318 LIDGKGLSNDISGMEQVVDSMKAEG-IELDVSTLSLLAKHYVSCGLKVKAKAILKEIEET 376
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N++ + L+ YG+ EV R+W A P+ + I LK++ A
Sbjct: 377 NSNGPQWLCRILLPFYGKLQMEDEVRRLWEICE-ANPHIEEC--MAAIVAWGQLKNVQEA 433
Query: 182 EKCF----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
EK F K W+ A R ++M+ Y L +E+ + G + T
Sbjct: 434 EKIFDRVVKTWKKLSA----RHYSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNA 489
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y+ G+++ A L KA+ + G K P + +T M H+ + DV AE +
Sbjct: 490 IVKLYVEAGEVEKADSFLVKAV---KKYGMK--PLFTSYKTLMDHYARRGDVHNAEKIFD 544
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
++++ + F LI+ Y A + M R+ +KV
Sbjct: 545 KMRQSSYIPRLGQFGTLIQAYVNAKTPAYGMRERMMADKV 584
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 158/337 (46%), Gaps = 11/337 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + + A + KM+EL+L S +N L+ L++ + I I+ +MKA + P + TYN
Sbjct: 168 LIKHSYAYMRKMRELSLPISPYVYNRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYN 227
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ++ A ++I G RV +MKR ++ + T+ LA + A L+ ++ +EN
Sbjct: 228 ILLKIQANEHNIDGLARVFSDMKR-AKIEPNEITYGILAISHAVARLYTVCHTYVEAIEN 286
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ S + L+ LYG G E+ R W ++ P+ + S+ I+ + +
Sbjct: 287 SMTGTNWSTLEILLILYGYLGKEKELKRTWEIMQ-DLPHVRSKSFTVAIEAFGKVGSIDQ 345
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK + + +S N ++ Y + G ++ A + + R G PNA T+ +
Sbjct: 346 AEKIWVQIKSTKKLSLTEQFNSILSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLAL 405
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGD-GGKWVPSS----ETIRTFMRHFEQEKDVDGAEGF 295
L++G +K A++ ID G+ + K V SS ET + +F + D++ A+
Sbjct: 406 GCLKSGLVKEALNT----IDMGKKEVVTKKVRSSTPWLETTHLLLENFAEIGDLENAKRL 461
Query: 296 LEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRL 332
L ++ V+ L++ Y A P +LR +
Sbjct: 462 YSELNESKYSRNSFVYNTLLKAYVKAKVYEPDLLRTM 498
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK ++ K+L+L + FNS++++Y + G +K ++ +EM+A+ P++ TY
Sbjct: 347 EKIWVQIKSTKKLSL---TEQFNSILSVYCRHGVVDKASSVFKEMRANGCQPNAITY--- 400
Query: 63 MRALA-----------AVNDISGAERVIEEMKRDGRVAADWTTFSN-LASIYVEAGLFEK 110
R LA A+N I ++ E + + R + W ++ L + E G E
Sbjct: 401 -RHLALGCLKSGLVKEALNTIDMGKK--EVVTKKVRSSTPWLETTHLLLENFAEIGDLEN 457
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR--IWRS--LRLAFPNTANISYL 166
A+R EL R+ Y L+ Y + ++VY + R+ LR A P+ S L
Sbjct: 458 AKRLYSELNESKYSRNSFVYNTLLKAYVK----AKVYEPDLLRTMILRGAMPDAETYSLL 513
Query: 167 NMIQ 170
+I+
Sbjct: 514 RLIE 517
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 151/335 (45%), Gaps = 10/335 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K+E + +MK+L + FN L+ LY + +KI ++ M+ + P +TY +
Sbjct: 271 KKSEQVFNRMKDLGFPVTQFSFNQLLLLYKRLDR-KKIADVLAMMEKEDVKPSLFTYKIL 329
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +V DI E+VIE M++D + D T + +A Y+ G EKAE LK +E +
Sbjct: 330 VDAKGSVGDIEAMEKVIESMEKDS-IEPDLTFNATIARHYIFYGQREKAEALLKAMEGDD 388
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ +A + L+ L+ GN V RIW++ NT ++ I+ L D+ AE
Sbjct: 389 IQKNRAACKTLLPLHAFLGNSDAVERIWKACE---DNTRVAESVSAIEAFGKLGDVEKAE 445
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F++ T + N ++ YA L+ +EL +R A T + Y
Sbjct: 446 KVFEDMLVHWKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLY 505
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G+++ A + K P T T + + ++ DV +E L+++
Sbjct: 506 VEAGEVEKAESLVHKL-----SIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQS 560
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ +++ L+ Y A + R+K + +
Sbjct: 561 GYTGRIRMYQVLLHAYVRAKAPAYGFRERMKADNI 595
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 150/336 (44%), Gaps = 10/336 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + +MK+L ++ ++ ++ LY + +I I+ M+ ++ P +TY +
Sbjct: 257 VKKAEEVFNRMKDLEFPMTTFAYDQMLILYKRIDR-RRIADILSLMEKENVKPRPFTYKI 315
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A NDISG E+V++ MK +G + D T LA YV GL +KA LK E
Sbjct: 316 LIDAKGLSNDISGMEQVVDTMKAEG-IKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEV 374
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N+ ++L+ LYG+ EV R+W + PN + I LK++ A
Sbjct: 375 NSKGSRWPCRYLLPLYGELQMEDEVRRLW---EICEPNPNVEECMAAIVAWGKLKNIQEA 431
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK F + + MI Y L +EL + + G + W+
Sbjct: 432 EKIFDRVVKTWKRLSTKHYSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPMIWDAVVKL 491
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+ G+++ A L KA+ + G K P ++ RT M H+ ++ DV +E +++
Sbjct: 492 YVEAGEVEKADSFLFKAV---KQYGMK--PLFDSYRTLMVHYARKGDVHNSEKIFHKIRQ 546
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ F L++ Y A + M R+ + V
Sbjct: 547 SGYPTHFGQFVTLVQAYLNAKTPAYGMRERMMADNV 582
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 12/233 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT++AE L E+MK +L ++ +N +MTLY G K+ A+ +E+K ++ PD +TYN
Sbjct: 170 MTDRAERLFERMKGASLPMDALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYN 229
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAAD--WTTFSNLASIYVEAG--LFEKAERALK 116
+ A AA D+ G V++EM RD + + + W + +LAS+YV+AG L ++
Sbjct: 230 LRASAAAASMDLEGFRAVLDEMSRDLKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVE 289
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-------RLAFPNTANISYLNMI 169
E R + R+ Y FL+ L+ G + IWRS+ + + +Y+ ++
Sbjct: 290 AGEARISQREWITYDFLVILHAGLGRPERIRDIWRSMVATSQSQSQSQQRMTSRNYVCVV 349
Query: 170 QVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+ L A + +W+ S +D+ N ++ A + G + A +E
Sbjct: 350 SSYLACGRLEDAGEVVDQWQRSKAPEFDVSACNRLLDALLRAGLADAAGRFRE 402
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 158/352 (44%), Gaps = 18/352 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K+E + +MK+L ++ N L+ LY + +KI ++ M+ + P +TY V
Sbjct: 261 VKKSEQVFNRMKDLGFPVTTFSSNQLLLLYKRLDK-KKIADVLTMMEKEDVKPSIFTYKV 319
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A V D+ E+V+E M +DG + D T + +A Y+ G +KAE L+ +E
Sbjct: 320 LVDAKGMVGDVEAMEKVVESMVKDG-IEPDLTFNATIARQYIFNGQRDKAETLLESMEGD 378
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ ++ +A +FL+ LY GN V RIW ++ NT L+ I L ++ A
Sbjct: 379 DIQKNRAACKFLLPLYAFLGNGDAVERIW---KVCEDNTRIDECLSAIDAFGKLGNVEKA 435
Query: 182 EKCFKE----WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
EK F++ W++ + Y ++ YA + L+ EEL +R GA T
Sbjct: 436 EKVFEDMFVKWKNLSSKY----YTALLKVYANQNLLDKGEELAKRMDEEGAKFGTPTLNA 491
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y G+++ A L K PS + T + + ++ DV +E
Sbjct: 492 LVKLYADAGEVEKAESLLHKL-----SLKNNVKPSYSSYMTLLDSYSKKGDVHNSEKVFN 546
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEA 349
L++ + +++ L+ +Y A + R+K + + + A L+ A
Sbjct: 547 KLRQIGYTGRIRMYQFLLHSYLHAKAPAYGFKERMKADNIFPNSAVATLIAA 598
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK-ASSIMPDSYTY 59
+ +K E L ++M E F + N+L+ LYA G EK +++ ++ +++ P +Y
Sbjct: 466 LLDKGEELAKRMDEEGAKFGTPTLNALVKLYADAGEVEKAESLLHKLSLKNNVKPSYSSY 525
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDG 86
+ + + D+ +E+V ++++ G
Sbjct: 526 MTLLDSYSKKGDVHNSEKVFNKLRQIG 552
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 132/298 (44%), Gaps = 7/298 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KA L ++MK S+ F +LM K G + ++ EMK + P TYN
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ V D+ A +++EMKR+G D T+S L + ++A ++A + LK++E
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNG-CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKE 318
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y LI G+ G L++ R++ ++ N ++Y +I L + A
Sbjct: 319 GCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESA 378
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E ES D+ +I K G++++A+ L R +G P+ T+ F +
Sbjct: 379 CVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNS 438
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
R G K A E ++G +P T + + K+VD A G L+ L
Sbjct: 439 LGRGGRFKEARKIFEDMKESG------LLPDVATYDALLLGLSKTKEVDDACGLLKEL 490
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 1/235 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L +M+E + +NSL+ K G +K +++EM+ PD TY+ +
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + A ++ +EMKR GR D TF+ L +AG + A L E++ R
Sbjct: 192 TGLGKDGETVKAFKLFQEMKRRGR-KPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI +G+ G+L E Y + ++ ++Y +I L+ L A +
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K+ E D N +I K G L +A L +R + +G +P+ T+
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 14/324 (4%)
Query: 18 GFSS---MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 74
GF S + +NSL+ AK G E+ + +E+KA+ PD +Y+ + +L
Sbjct: 3 GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62
Query: 75 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
A V+ EM+ G W T++ L +AG F++A R L E+ + D+ Y LI
Sbjct: 63 ALEVVAEMQAKGCKPNLW-TYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLI 121
Query: 135 TLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
+ G+ G LSE + ++ + R P+T +Y ++I L + A + +E E
Sbjct: 122 STLGKAGRLSEAFTLFAEMRERGCVPDT--FTYNSLIYGLGKVGRSQKAMELLEEMERHG 179
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
D+ + +I K+G A +L + +RRG P++ T+ D + G + A+
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239
Query: 253 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 312
+ L++ + G P T + F + D+ A L+ +K+ V +
Sbjct: 240 ELLDEMKERG------VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 313 PLIRTYAAAGRTSPVMLRRLKMEK 336
LI A + KMEK
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEK 317
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 139/319 (43%), Gaps = 9/319 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL++MKE + + +N+L+ + K G + ++ EMK + PD TY+ + L
Sbjct: 241 LLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLI 300
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ + A +V+++M+++G D T++ L + +AGL A R ++++ + D+
Sbjct: 301 KASQLDEACQVLKKMEKEG-CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDV 359
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LIT G+ + ++ + +Y ++I VL + A++ F E
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ D+ N + + + GR + A ++ E + G P+ T++ + +
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479
Query: 248 MKLAVDCLEKAIDTGRG-DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
+ A L++ I+ G D K+ E + ++ +VD A L+
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSW-------GNVDEAHELLQFANSKGLWP 532
Query: 307 GVEVFEPLIRTYAAAGRTS 325
G + LI A AGR S
Sbjct: 533 GASSYNALIDALAKAGRVS 551
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 3/257 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A+ L E++K + ++ L+ + G E ++ EM+A P+ +TYN
Sbjct: 25 CEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNT 84
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A R++ EM+ +G V D T++ L S +AG +A E+ R
Sbjct: 85 LVDCLGKAGQFDEALRLLAEMRDNGCV-PDVRTYNCLISTLGKAGRLSEAFTLFAEMRER 143
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y LI G+ G + + + R P ++Y ++I L +
Sbjct: 144 GCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV-MTYSSLITGLGKDGETVK 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K F+E + D ++ A K GR+++A EL + + RG P T+
Sbjct: 203 AFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIA 262
Query: 241 YYLRNGDMKLAVDCLEK 257
+ + GD+ A + L++
Sbjct: 263 GFGKVGDLVEAYNLLDE 279
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/205 (18%), Positives = 83/205 (40%), Gaps = 34/205 (16%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A+ L +M+ L + +N+ + + G ++ I ++MK S ++PD TY+
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDA 469
Query: 62 WMRALAAVNDISGAERVIEEMKRDG------------RVAADW----------------- 92
+ L+ ++ A +++E+ G + W
Sbjct: 470 LLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKG 529
Query: 93 -----TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
++++ L +AG +A L++L+ + D+ +Y LI+ GQTG + +
Sbjct: 530 LWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAF 589
Query: 148 RIWRSLRLAFPNTANISYLNMIQVL 172
+ + + SY N+++ L
Sbjct: 590 ELLEEMSKRGLKLSPRSYSNLVRKL 614
>gi|255562320|ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538605|gb|EEF40208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 342
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 142/326 (43%), Gaps = 10/326 (3%)
Query: 12 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
MK+L ++ N L+ LY + +KI ++ M+ +I P +TY + + ND
Sbjct: 1 MKDLEFPVTTFACNQLLLLYKRLD-KKKIADVLLLMEKENIKPSLFTYKLLIDTKGQSND 59
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
++G ++++E MK DG + D + LA Y GL EKAE LKE+E N A +
Sbjct: 60 LTGMDQIVETMKADG-IEPDINIRAILAKHYASGGLKEKAEAILKEMEGGNLEEHRWACR 118
Query: 132 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 191
L+ LY G EV R+W+ + P + +I+ LK + AE+ F +
Sbjct: 119 LLLPLYAALGKADEVERVWKVCE-SSPQLEEC--VAVIEAWGKLKKIDKAEEVFNRMLTT 175
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
R + ++ YA L N ++L ++ G TW+ Y+ G+++ A
Sbjct: 176 WKKLSSRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAGEVEKA 235
Query: 252 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
L KA P + M + + DV AE +++A + F
Sbjct: 236 DSVLHKAAQQNHMK-----PMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGYVARLRQF 290
Query: 312 EPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ L++TY A + + R+K + +
Sbjct: 291 QALVQTYINAKAPAYGIRERMKADNI 316
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM-PDSYTY 59
M + L++KM + + ++SL+ LY + G EK +++ + + M P +Y
Sbjct: 196 MLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAGEVEKADSVLHKAAQQNHMKPMFSSY 255
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
V M A D+ AE++ M++ G VA F L Y+ A R + +
Sbjct: 256 IVIMDQYAKRGDVHNAEKMFHRMRQAGYVAR-LRQFQALVQTYINAKAPAYGIRERMKAD 314
Query: 120 NRNAHRDLSAYQFLITLYGQTG 141
N ++ L+A L+ + +T
Sbjct: 315 NIFPNKALAAQLALVDAFRKTA 336
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 127/256 (49%), Gaps = 3/256 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+AEA+ E++KE L + +N+L+ Y KTG + +I+ EM+ S PD +TY++
Sbjct: 307 TEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSL 366
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A A V++EM+ G V + FS + + Y + G ++K+ + L+E+ N
Sbjct: 367 LIDAYANAGRWESARIVLKEMEASG-VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNS 425
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y +I +G+ L + +R+ +++ +I A
Sbjct: 426 GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 485
Query: 182 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E+ F+ ESGC+ N+MI ++ ++ R E+ + L + + +G N T+ D
Sbjct: 486 EELFEAMQESGCSPCTT-TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVD 544
Query: 241 YYLRNGDMKLAVDCLE 256
Y ++G K A++CLE
Sbjct: 545 IYGQSGRFKDAIECLE 560
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 116/298 (38%), Gaps = 42/298 (14%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
+++T G E+ AI +E+K +MP + YN ++ + AE ++ EM+R
Sbjct: 296 AVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERS 355
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G + D T+S L Y AG +E A LKE+E + + ++ Y G +
Sbjct: 356 G-FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQK 414
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+++ R +R SG + D NVMI
Sbjct: 415 SFQVLREMR----------------------------------NSGVSP-DRHFYNVMID 439
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
+ K L++A +R R G P+A TW D + ++G A + E ++G
Sbjct: 440 TFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESG--- 496
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
P + T + F +++ + + L ++ V + L+ Y +GR
Sbjct: 497 ---CSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGR 551
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A ++M+ + ++ +N+L+ + K+GH K + + M+ S P + TYN+
Sbjct: 448 DHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIM 507
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + ++ +M+ G + A+ T++ L IY ++G F+ A L+ +++
Sbjct: 508 INSFGEQERWEDVKTLLGKMQSQG-LLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVG 566
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
+ Y LI Y Q G + +R +R
Sbjct: 567 LKPSSTMYNALINAYAQRGLSEQAINAFRVMR 598
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 7/244 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +L+ ++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 137 AYSLVTWLERHNLCFSYELLYSI--LIHALGRSEKLYEAFLLSQRQTLTP--LTYNALIG 192
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA--ERALKELENRN 122
A A +D+ A ++ M+RDG +D+ +S + + + ++ E+E+
Sbjct: 193 ACARNDDLEKALNLMSRMRRDG-FPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDK 251
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D +I + ++G+++ ++ + + + +I L N AE
Sbjct: 252 IELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAE 311
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E + G R N ++ Y K G L++AE + R G P+ T+ + D Y
Sbjct: 312 AIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAY 371
Query: 243 LRNG 246
G
Sbjct: 372 ANAG 375
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 151/337 (44%), Gaps = 11/337 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + KMK+L ++ N L+ LY +T K+ I+ M+ ++ P +TY +
Sbjct: 261 VQKAEEVFNKMKDLEFPITAFACNQLLLLYKRT-DKRKVADILLLMEKENVKPSRFTYRI 319
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ NDI+G E+V++ MK +G + D +T S LA Y+ GL +KA+ LKE+E
Sbjct: 320 LIDTKGLSNDITGMEQVVDTMKAEG-IELDVSTLSVLAKHYISGGLKDKAKAILKEMEEI 378
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N+ + L+ LYG+ EV R+W + N + I LK++ A
Sbjct: 379 NSEGSRWPCRILLPLYGELQMEDEVRRLW---EICGSNPHIEECMAAIVAWGKLKNIQEA 435
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGR-LENAEELKERARRRGADPNAKTWEIFSD 240
EK F R + M+ Y ++ + L +E+ ++ G+ + T +
Sbjct: 436 EKIFDRVVKTGEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVK 495
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ G+++ A L K + + P T T M + DV AE +++
Sbjct: 496 LYVEAGEVEKADSFLVKTVLQYKKK-----PMFTTYITLMDRYASRGDVPNAEKIFGMMR 550
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
K + F+ LI+ Y A + M R+K + V
Sbjct: 551 KYGYVGRLSQFQTLIQAYVNAKAPAYGMRERMKADSV 587
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 147/338 (43%), Gaps = 16/338 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE + KMK+L ++ +N ++ LY K KI ++ M+ ++ P +TY + +
Sbjct: 255 KAEEVFNKMKDLEFPMTTFAYNQVLVLY-KRNDRRKIADVLLLMEKENVKPSPFTYKILI 313
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A DISG E+V++ MK +G + D LA YV GL +KA+ LKE+E N+
Sbjct: 314 DAKGLSKDISGMEQVVDTMKAEG-IELDVFALCLLAKHYVSCGLKDKAKATLKEMEEINS 372
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ L+ LYG+ EV R+W A P+ + I LK++ AEK
Sbjct: 373 KGSRWPCRLLLPLYGELEMEDEVRRLWEICE-ANPHIEEC--MAAIVAWGKLKNIHEAEK 429
Query: 184 CF----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
F K W + T MI Y L +EL + G + W+
Sbjct: 430 IFDKVVKTWPKKKISTKHYCT--MIKVYGDCKMLTKGKELVNQMAESGYSIDPLAWDAVV 487
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y+ G+++ A L KA+ P + RT M H+ + DV AE +
Sbjct: 488 KLYVEAGEVEKADTFLVKAVKKYEMR-----PLYCSYRTLMNHYARRGDVHNAEKIFYKM 542
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+++ FE LI+ Y + + M R+ +K+
Sbjct: 543 RQSGYGPWFNQFETLIQAYVNSKTPAYGMRERMMADKL 580
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 155/344 (45%), Gaps = 26/344 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K+E + KMK+L S + ++ L+ + +KI ++ M+ +I P TY +
Sbjct: 245 VKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKI 303
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A NDISG E+++E MK +G V D+ T + A Y AGL +KAE+ LKE+E
Sbjct: 304 LIDVKGATNDISGMEQILETMKDEG-VELDFQTQALTARHYSGAGLKDKAEKVLKEMEGE 362
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + A++ L+++Y G EV RIW ++ L IQ L + A
Sbjct: 363 SLEANRRAFKDLLSIYASLGREDEVKRIW---KICESKPYFEESLAAIQAFGKLNKVQEA 419
Query: 182 EKCFK-----EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
E F+ + + +TY +V++ Y L ++L +R G A TW+
Sbjct: 420 EAIFEKIVKMDRRASSSTY-----SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWD 474
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF---MRHFEQEKDVDGAE 293
Y+ G+++ A L+KA K + + +F M + + DV E
Sbjct: 475 ALIKLYVEAGEVEKADSLLDKA--------SKQSHTKLMMNSFMYIMDEYSKRGDVHNTE 526
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+++A + F+ L++ Y A + M RLK + +
Sbjct: 527 KIFLKMREAGYTSRLRQFQALMQAYINAKSPAYGMRDRLKADNI 570
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 96/208 (46%), Gaps = 5/208 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KAE +L++M+ +L + F L+++YA G +++ I + ++ +S
Sbjct: 348 LKDKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESL--- 404
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++A +N + AE + E++ + R A+ +T+S L +YV+ + K + +K +
Sbjct: 405 AAIQAFGKLNKVQEAEAIFEKIVKMDRRASS-STYSVLLRVYVDHKMLSKGKDLVKRMAE 463
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + + LI LY + G + + + ++ + + S++ ++ D+
Sbjct: 464 SGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQSHTKLMMNSFMYIMDEYSKRGDVH 523
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAY 207
EK F + T +R ++ AY
Sbjct: 524 NTEKIFLKMREAGYTSRLRQFQALMQAY 551
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 18/329 (5%)
Query: 16 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
NL +++ +NSL+T Y G +++ M + + PD+YT+N + A A ++ A
Sbjct: 25 NLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAA 84
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIY-VEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
E+++ M+ G V AD T+S L Y + G KAE L+ + + Y +LI
Sbjct: 85 EKMVAYMQEHG-VLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLI 143
Query: 135 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 194
Y + G + + +R +++Y ++ +D GAEK +
Sbjct: 144 EGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQ 203
Query: 195 YDIRVTNVMIGAYAKEGRLENAEEL---------KERARRRGADPNAKTWEIFSDYYLRN 245
+++V ++ AYAK G +E AE + +E + +PN T+ + Y R
Sbjct: 204 ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARA 263
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 305
G A L + G W P+ T T M + + D +GAE L+ ++ A
Sbjct: 264 GLAAGAEGVLTRMTAAG------WAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVS 317
Query: 306 LGVEVFEPLIRTYAAAG-RTSPVMLRRLK 333
V + L+ + G R V RR K
Sbjct: 318 PNVLTYNTLLSATSRMGLREGEVEERRAK 346
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 138/319 (43%), Gaps = 19/319 (5%)
Query: 35 GHPEKIPAIIQEMK----ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 90
G P+ + ++ E + ++ P++ TYN + A D++GA++V++ M + G ++
Sbjct: 5 GQPQVLARLVAEGERAGEGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAG-LSP 63
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY----GQTGNLSEV 146
D TF+ L + +V AE+ + ++ D+ Y L+ Y G G EV
Sbjct: 64 DTYTFNTLIAAFVARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEV 123
Query: 147 YRIWRSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMI 204
+ R R PN+ +YL I+ V ++ AE + + G A + V++
Sbjct: 124 --LERMARDGVAPNSYTYNYL--IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYC-VLM 178
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
AY + AE++ +R ++ G N + + + Y + GD++ A L + +
Sbjct: 179 DAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEE 238
Query: 265 DGG---KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
+GG P+ T T M + + GAEG L + A V F L+ Y+ A
Sbjct: 239 EGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRA 298
Query: 322 GRTSPVMLRRLKMEKVEVS 340
G L +ME VS
Sbjct: 299 GDPEGAELVLKRMEAAGVS 317
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 15/233 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE +LE+M + +S +N L+ Y K G + +++ M+ + P S Y V M
Sbjct: 119 KAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLM 178
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL----- 118
A D GAE++++ MK++G V A+ F+ L + Y + G E AE L +
Sbjct: 179 DAYTRRRDARGAEKILDRMKKEG-VQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAE 237
Query: 119 ----ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVL 172
+++ ++ Y L+ +Y + G + + + A PN I++ ++
Sbjct: 238 EEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNV--ITFTTLMTAY 295
Query: 173 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
D GAE K E+ + ++ N ++ A ++ G L E + RA+R
Sbjct: 296 SRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMG-LREGEVEERRAKR 347
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 150/333 (45%), Gaps = 10/333 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AEA+ KMK+L S+ N ++ LY + +KI ++ ++ ++ P+ TY + +
Sbjct: 275 AEAVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPNLNTYKILID 333
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ NDI+G E+++E MK +G V D + +A Y AGL EKAE+ LKE+E +
Sbjct: 334 TKGSSNDITGMEQIVETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLE 392
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ + L+++YG EV R+W ++ N L I + + AE
Sbjct: 393 ENRHMCKDLLSVYGYLQREDEVRRVW---KICEENPRYNEVLAAILAFGKIDKVKDAEAV 449
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F++ V +V++ Y + ++L ++ G + A TW+ Y+
Sbjct: 450 FEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVE 509
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
G+++ A L KAI + + P + M + + DV E + +K+A
Sbjct: 510 AGEVEKAESSLSKAIQS-----KQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGY 564
Query: 305 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
++ LI+ Y A + M R+K + +
Sbjct: 565 QSRFWAYQTLIQAYVNAKAPAYGMKERMKADNI 597
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 18/329 (5%)
Query: 16 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
NL +++ +NSL+T Y G +++ M + + PD+YT+N + A A ++ A
Sbjct: 18 NLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAA 77
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIY-VEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
E+++ M+ G V AD T+S L Y + G KAE L+ + + Y +LI
Sbjct: 78 EKMVAYMQEHG-VLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLI 136
Query: 135 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 194
Y + G + + +R +++Y ++ +D GAEK +
Sbjct: 137 EGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQ 196
Query: 195 YDIRVTNVMIGAYAKEGRLENAEEL---------KERARRRGADPNAKTWEIFSDYYLRN 245
+++V ++ AYAK G +E AE + +E + +PN T+ + Y R
Sbjct: 197 ANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARA 256
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 305
G A L + G W P+ T T M + + D +GAE L+ ++ A
Sbjct: 257 GLAAGAEGVLTRMTAAG------WAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVS 310
Query: 306 LGVEVFEPLIRTYAAAG-RTSPVMLRRLK 333
V + L+ + G R V RR K
Sbjct: 311 PNVLTYNTLLSATSRMGLREGEVEERRAK 339
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 15/233 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE +LE+M + +S +N L+ Y K G + +++ M+ + P S Y V M
Sbjct: 112 KAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLM 171
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL----- 118
A D GAE++++ MK++G V A+ F+ L + Y + G E AE L +
Sbjct: 172 DAYTRRRDARGAEKILDRMKKEG-VQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAE 230
Query: 119 ----ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVL 172
+++ ++ Y L+ +Y + G + + + A PN I++ ++
Sbjct: 231 EEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNV--ITFTTLMTAY 288
Query: 173 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
D GAE K E+ + ++ N ++ A ++ G L E + RA+R
Sbjct: 289 SRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLSATSRMG-LREGEVEERRAKR 340
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 15/302 (4%)
Query: 48 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 107
+ ++ P++ TYN + A D++GA++V++ M + G ++ D TF+ L + +V
Sbjct: 15 EGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAG-LSPDTYTFNTLIAAFVARRE 73
Query: 108 FEKAERALKELENRNAHRDLSAYQFLITLY----GQTGNLSEVYRIWRSLRLAF-PNTAN 162
AE+ + ++ D+ Y L+ Y G G EV + R R PN+
Sbjct: 74 VRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEV--LERMARDGVAPNSYT 131
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+YL I+ V ++ AE + + G A + V++ AY + AE++ +
Sbjct: 132 YNYL--IEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYC-VLMDAYTRRRDARGAEKILD 188
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG---KWVPSSETIRT 278
R ++ G N + + + Y + GD++ A L + + +GG P+ T T
Sbjct: 189 RMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYST 248
Query: 279 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVE 338
M + + GAEG L + A V F L+ Y+ AG L +ME
Sbjct: 249 LMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAG 308
Query: 339 VS 340
VS
Sbjct: 309 VS 310
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 150/333 (45%), Gaps = 10/333 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AEA+ KMK+L S+ N ++ LY + +KI ++ ++ ++ P+ TY + +
Sbjct: 246 AEAVFNKMKDLGFPLSTFTCNQMLILYKRVD-KKKIADVLLLLEKENLKPNLNTYKILID 304
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ NDI+G E+++E MK +G V D + +A Y AGL EKAE+ LKE+E +
Sbjct: 305 TKGSSNDITGMEQIVETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLE 363
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ + L+++YG EV R+W ++ N L I + + AE
Sbjct: 364 ENRHMCKDLLSVYGYLQREDEVRRVW---KICEENPRYNEVLAAILAFGKIDKVKDAEAV 420
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F++ V +V++ Y + ++L ++ G + A TW+ Y+
Sbjct: 421 FEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVE 480
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
G+++ A L KAI + + P + M + + DV E + +K+A
Sbjct: 481 AGEVEKAESSLSKAIQS-----KQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGY 535
Query: 305 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
++ LI+ Y A + M R+K + +
Sbjct: 536 QSRFWAYQTLIQAYVNAKAPAYGMKERMKADNI 568
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 3/323 (0%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
KM+EL+L S +N L+ L++ G + I I+ +MK + P + TYN+ ++ A +
Sbjct: 174 KMRELSLPISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEH 233
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
+I G RV +MKR +V + T+ LA + A L+ + ++ +EN + S
Sbjct: 234 NIDGVARVFNDMKR-AKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWSTL 292
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
+ L+ LYG G E+ W L P+ S++ I+ + + AE+ + ++ES
Sbjct: 293 EILLILYGYHGKAKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFES 351
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
N ++ Y + G ++ A + + R G PNA T+ + L+ G +K
Sbjct: 352 TRKPKLTEQFNSILSVYCRHGLVDKASAVFKEMRANGCQPNAITYRHLTLGCLKAGIVKE 411
Query: 251 AVDCLEKA-IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 309
A+ ++ A + P ET + F + D+ A+ + L ++
Sbjct: 412 ALKTMDIAKKEVVTKKVKSSTPWLETTHMILESFAENGDLVNAKRVFDELNESKYCRNSF 471
Query: 310 VFEPLIRTYAAAGRTSPVMLRRL 332
V+ L++ + A P +LR +
Sbjct: 472 VYNTLLKAHVKAKVYEPDLLRAM 494
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 16/339 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K+E + +MK+L S + ++ LY + +KI ++ M+ ++ P TY +
Sbjct: 246 VKKSELVFNRMKDLGFPLSGFTCDQMLLLYKRIDR-KKIADVLLLMEKENVKPSLLTYKI 304
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A NDISG E+++E MK +G V D+ T + A Y AGL EKAE+ LKE+E
Sbjct: 305 LIDVKGATNDISGMEQILETMKDEG-VQPDFQTQALTAKHYSGAGLKEKAEKVLKEMEGE 363
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + A++ L+++Y G EV RIW ++ L I L + A
Sbjct: 364 SLEANRRAFKDLLSIYASLGREDEVTRIW---KICESKPYFDESLAAIHAFGKLNKVQEA 420
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F++ + +V++ Y L ++L +R G A TW+
Sbjct: 421 EAIFEKIVTMGRRASSNTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKL 480
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF---MRHFEQEKDVDGAEGFLEI 298
Y+ G+++ A L+KA K + + +F M + + DV E
Sbjct: 481 YVEAGEVEKADSMLDKA--------SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLK 532
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+++ + F+ L++ Y A + M R+K + +
Sbjct: 533 MREVGYTSRLRQFQALLQAYINAKAPAYGMRDRMKADNI 571
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE +L++M+ +L + F L+++YA G +++ I + ++ +S
Sbjct: 349 LKEKAEKVLKEMEGESLEANRRAFKDLLSIYASLGREDEVTRIWKICESKPYFDESL--- 405
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +N + AE + E++ GR A+ T+S L +YV+ + K + +K +
Sbjct: 406 AAIHAFGKLNKVQEAEAIFEKIVTMGRRASS-NTYSVLLRVYVDHKMLSKGKDLVKRMAE 464
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + + LI LY + G + + + ++ + + S++ ++ D+
Sbjct: 465 SGCRIEATTWDALIKLYVEAGEVEKADSMLDKASKQSHTKLMMNSFMYIMDEYSKRGDVH 524
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAY 207
EK F + T +R ++ AY
Sbjct: 525 NTEKIFLKMREVGYTSRLRQFQALLQAY 552
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 152/334 (45%), Gaps = 12/334 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K+E + KMK+L + N L+ LY + +KI ++ +M+ ++ P +TY +
Sbjct: 261 VKKSEEVFNKMKDLGFPVTVFAINQLLLLYKRVDK-KKIADVLAKMEKENVKPSLFTYKL 319
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A+ DI+G E+V+E M+ +G V D + +A Y+ AG EKAE L+ +E
Sbjct: 320 LVDTKGAIRDIAGMEKVVESMQAEG-VEPDLLFQATIAKHYIFAGHREKAEAILESMEGG 378
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + +A + L+ LY G +V R+W ++ N L+ I+ L D+ A
Sbjct: 379 DIKGNRNACKILLPLYAFLGKKDDVERMW---QVCEANPRLDECLSAIESFGRLGDVERA 435
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK F++ + T + N ++ YA + + +EL +R G T +
Sbjct: 436 EKVFEDMFATWKTLSSKFYNALMKVYADQNLFKKGKELAKRMDEDGCRLGISTIDSLVKL 495
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y+ G++ A L K K P + + + ++ D+ +E + L++
Sbjct: 496 YVGAGEVDKAESILHKL-----SKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFDQLRQ 550
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 335
+ V ++ L+ Y A +PV R +M+
Sbjct: 551 MGYNGRVRQYQLLLNAYVHA--KTPVYGFRERMK 582
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 65/165 (39%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+AE + E M SS +N+LM +YA +K + + M T +
Sbjct: 432 VERAEKVFEDMFATWKTLSSKFYNALMKVYADQNLFKKGKELAKRMDEDGCRLGISTIDS 491
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ ++ AE ++ ++ + ++ ++++ L Y + G +E+ +L
Sbjct: 492 LVKLYVGAGEVDKAESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFDQLRQM 551
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 166
+ + YQ L+ Y +R FPN+ S L
Sbjct: 552 GYNGRVRQYQLLLNAYVHAKTPVYGFRERMKADNIFPNSVIASLL 596
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 19/339 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE + KMK+L + N L+ LY +T +KI ++ M+ ++ P T+ +
Sbjct: 274 KKAEEIFNKMKDLEFPLTPFACNQLLLLYKRTDK-KKIADVLLLMEQENVKPSPLTFKIL 332
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ NDI G ++++++M+ +G + D T + L Y+ G +KA+ LKE+E N
Sbjct: 333 IDVKGQSNDIDGMDQIVDQMRAEG-IEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGEN 391
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + L+ LY + G EV R+W+ P+ + + I+ LK + AE
Sbjct: 392 LKENRWVCRLLLALYAKLGMADEVGRVWKVCE-TRPSVEDC--VAAIEAWGKLKKIDEAE 448
Query: 183 KCF----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
F ++W+ + +V++ YA L ++L +R +G TW
Sbjct: 449 AVFEVMARKWK-----LTSKNCSVLLNVYANNKMLTKGKDLIKRMAHKGCRIGPLTWNAL 503
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
Y++ G+++ A L+KAI P + T + + + D+ +E
Sbjct: 504 VKLYVQAGEVEKADSVLQKAIQQ-----SPVRPIFSSYNTLLEEYSKRGDIHNSEKIFYR 558
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+K+A ++ ++ LI Y A + + RLK + V
Sbjct: 559 MKQAGYISRLKQYQILIEAYRRANVPAYGIRDRLKADNV 597
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE-MKASSIMPDSYTY 59
M K + L+++M + +N+L+ LY + G EK +++Q+ ++ S + P +Y
Sbjct: 477 MLTKGKDLIKRMAHKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKAIQQSPVRPIFSSY 536
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVA 89
N + + DI +E++ MK+ G ++
Sbjct: 537 NTLLEEYSKRGDIHNSEKIFYRMKQAGYIS 566
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 10/333 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AEA+ KMK+L S+ N ++ LY + +KI ++ M+ ++ P+ TY + +
Sbjct: 246 AEAVFNKMKDLGFPLSTFTCNQMLILYKRVDK-KKIADVLLLMEKENLKPNLNTYKILID 304
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
NDI+G E+++E MK +G V D + +A Y AGL EKAE+ LKE+E +
Sbjct: 305 TKGLSNDITGMEQIVETMKSEG-VEPDLRARALIARNYASAGLKEKAEKVLKEMEGESLE 363
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y+ L+++YG EV RIW ++ L I + + AE
Sbjct: 364 ENRHVYKDLLSVYGFLQRADEVTRIW---KICEEKPRYNESLAAILAFGKIDKVKEAEAV 420
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F++ V +V++ Y + ++L ++ G + A T + YL
Sbjct: 421 FEKMLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMLDSGCNIGALTLDAVIKLYLE 480
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
G+++ A L KAI + + P + M + + DV E + +K+
Sbjct: 481 AGEVEKAESSLSKAIQS-----KQIKPLMSSFMYVMGEYVRRGDVHNTEKIFQRMKQFGY 535
Query: 305 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
++ LI+ Y A + M R+K + +
Sbjct: 536 QSRFRTYQALIQAYVNAKAPAYGMKDRMKADNI 568
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 146/356 (41%), Gaps = 34/356 (9%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++LM + G KI +++EMK+ + P+ YTY + +RAL I A + +EM
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMD 297
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T++ L AG +KA+ ++ + D Y L+ +G+ G+L
Sbjct: 298 DEG-CGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDL 356
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
V R W + + ++Y +I+ L D+ A + ++ N M
Sbjct: 357 ETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTM 416
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA----- 258
I K RL+ A EL E G P A ++ +F DYY ++GD A+D E
Sbjct: 417 ICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGI 476
Query: 259 --------------IDTGRGDGGKWV----------PSSETIRTFMRHFEQEKDVDGAEG 294
+TGR + + P S T M+ + + +D A
Sbjct: 477 MPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQ 536
Query: 295 FL-EILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
L E++ K + V + LI T AGR M RLK K+ + + +L
Sbjct: 537 LLSEMISKGCEP-DVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNIL 591
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 119/301 (39%), Gaps = 46/301 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LLE M+ L + ++ + + Y K+G P K + MK IMP N
Sbjct: 427 DEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNAS 486
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ LA IS AE + ++ + G ++ D T++ L Y +AG +KA + L E+ ++
Sbjct: 487 LYTLAETGRISEAEDIFNDLHKCG-LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKG 545
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ LI + G + ++++ L+ NLK P
Sbjct: 546 CEPDVMIINSLINTLYKAGRVDAAWKMFGRLK-------------------NLKLAPTV- 585
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
TY+I +T + KEG++ A EL G PN T+ D
Sbjct: 586 ----------VTYNILLTGL-----GKEGKILKALELFGSMTESGCPPNTITFNSLLDCL 630
Query: 243 LRNG--DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+N D+ L + C ++ P T T + +E +D A F +K
Sbjct: 631 SKNDAVDLALKMFCRMTMMNCN--------PDVLTYNTIIYGLIREGRIDYAFWFFHQMK 682
Query: 301 K 301
K
Sbjct: 683 K 683
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 128/322 (39%), Gaps = 7/322 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
TEKA L E MK ++ +N L+ + K+ K+ + EM++ P++ T+N
Sbjct: 811 FTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHN 870
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + AL N+++ A + E+ G + T+ L ++AG E+A + +E+ +
Sbjct: 871 IIISALVKSNNLNKALDLYYEL-MSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLD 929
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y LI +G++G + +++ + SY +++ L +
Sbjct: 930 YGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDE 989
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F+E + D N +I K RL+ A L + RG P+ T+
Sbjct: 990 AVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALIL 1049
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ G + +AV E+ G PS T +R + D A + +
Sbjct: 1050 HLGIAGKVDVAVKMYEELQLVG------LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMM 1103
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
E F L Y AG
Sbjct: 1104 VVGCSPNTETFAQLPNKYPRAG 1125
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A + ++M + G + + L+ G +K + +M+ASS PD TY
Sbjct: 287 DDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITL 346
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M V D+ +R EM+ DG A D T++ L ++G ++A L + +
Sbjct: 347 MDKFGKVGDLETVKRFWNEMEVDG-YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+L Y +I + L E + ++ SY+ I D A
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+ + I N + A+ GR+ AE++ + G P++ T+ + Y
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY 525
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G + A L + I G
Sbjct: 526 SKAGQIDKATQLLSEMISKG 545
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/325 (18%), Positives = 121/325 (37%), Gaps = 42/325 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA+ L KM+ + + + +LM + K G E + EM+ PD TY +
Sbjct: 322 DKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTIL 381
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL D+ A +++ M G + + T++ + ++A ++A L+ +E+
Sbjct: 382 IEALCKSGDVDRAFDMLDVMTTKG-IFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440
Query: 123 AHRDLSAYQFLITLYG-----------------------------------QTGNLSEVY 147
+Y I YG +TG +SE
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAE 500
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
I+ L + +++Y +++ + A + E S D+ + N +I
Sbjct: 501 DIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTL 560
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
K GR++ A ++ R + P T+ I + G + A++ ++G
Sbjct: 561 YKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG----- 615
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGA 292
P++ T + + + VD A
Sbjct: 616 -CPPNTITFNSLLDCLSKNDAVDLA 639
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 41/261 (15%)
Query: 5 AEALLEKMKELNLGFSSM--PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
A+ + +K + NLG +N LM + EK + ++MK++ P+++TYN+
Sbjct: 779 AQNVFDKFTK-NLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLL 837
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D G + I + L +Y E+ +R
Sbjct: 838 L-------DAHGKSKRINK----------------LYDLY-------------SEMRSRG 861
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + +I+ ++ NL++ ++ L + +Y +I L+ A
Sbjct: 862 CEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAM 921
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K F+E + GC + + N++I + K G ++ A EL ++ + G P+ K++ I +
Sbjct: 922 KIFEEMLDYGCGPNSV-IYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVEC 980
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
G + AV E+ TG
Sbjct: 981 LCITGRIDEAVQYFEELKLTG 1001
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 151/335 (45%), Gaps = 15/335 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE++ KM++L L + ++ +Y + +KIP I+ MK +I P TY +
Sbjct: 100 KKAESVFRKMRDLGLPITVEACEQMIIIYKRL-EKKKIPNILLMMKDQNIKPSFLTYKLL 158
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ND +G E+++E M+ +G + D + +A Y+ GL +KA+ LK++E R
Sbjct: 159 IDAKCQFNDTTGMEKLVEAMRNEG-MELDVFALAVIARHYISVGLKDKADLILKQIEKRK 217
Query: 123 AH-RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG- 180
L A + L++LY GN EV RIW+ + + I+ + L +++
Sbjct: 218 QKGGGLGARRSLLSLYASLGNADEVGRIWKECKADPKQSECIAAIRAWGKLGKVEEAEAV 277
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+E + W++ Y + NV Y ++L E+ G+ TW+
Sbjct: 278 SEMMLQTWKNPTFGYYTSLLNV----YIDNNLTSKGKDLVEQMGDIGSWAGPLTWDALVR 333
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+++GD++ A L K R P T M H+ + D+ E + ++
Sbjct: 334 LYIKSGDVEKAHSILLKVARMKRKR-----PLYTTCIAVMEHYAKRGDIHNTEKLFQSMR 388
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 335
+ + FE L+ Y A +P+ R +M+
Sbjct: 389 ELGYTARFKPFEILVDAYINA--KTPIYGLRARMK 421
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 10/335 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE + KMK+L ++ N L+ LY + +KI ++ M+ + P +TY +
Sbjct: 274 KKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLL 332
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ NDI+G E+++E MK +G + + S L YV GL EKAE LKE+E N
Sbjct: 333 IDTKGQSNDITGMEQIVETMKAEG-IEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGN 391
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + L+ Y G +V RIW ++ N ++ I+ LK + AE
Sbjct: 392 LKENRWVCRVLLPPYAALGKADDVERIW---KVCESNPRLPEFVAAIEAYGKLKKVEEAE 448
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F + + + ++ YA L ++L ++ G TW+ Y
Sbjct: 449 AIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLY 508
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G+++ A L+KA+ P T M + + D+ +E ++++
Sbjct: 509 VEAGEVEKADKILQKAMQQ-----SPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQS 563
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ F+ LI+ Y A + + R+K + +
Sbjct: 564 GYVSRLRQFQCLIQAYVNAKAPAYGIKERMKADNI 598
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE-MKASSIMPDSYTY 59
M K + L+++M + + +++L+ LY + G EK I+Q+ M+ S I P TY
Sbjct: 478 MLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTY 537
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
M A DI +E++ +M++ G V+ F L YV A
Sbjct: 538 MAIMDQYAKRGDIHNSEKMFHQMRQSGYVSR-LRQFQCLIQAYVNA 582
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 7/232 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAEA+L++M+ NL + L+ YA G + + I + +++ +P+ +
Sbjct: 376 LKEKAEAILKEMEGGNLKENRWVCRVLLPPYAALGKADDVERIWKVCESNPRLPE---FV 432
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + + AE + +M + + + +S L +Y + + K + +K++ +
Sbjct: 433 AAIEAYGKLKKVEEAEAIFNKMSKTFKRLSS-KHYSALLKVYADHKMLIKGKDLVKQMSD 491
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS-YLNMIQVLVNLKDLP 179
+ L+ LY + G + + +I + P S Y+ ++ D+
Sbjct: 492 SGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTYMAIMDQYAKRGDIH 551
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
+EK F + +R +I AY A +KER + PN
Sbjct: 552 NSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAK--APAYGIKERMKADNIFPN 601
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 10/335 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE + KMK+L ++ N L+ LY + +KI ++ M+ + P +TY +
Sbjct: 237 KKAEEVFNKMKDLGFPITTFACNQLLLLYKRVDK-KKIADVLLLMEKEDVKPSLFTYGLL 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ NDI+G E+++E MK +G + + S L YV GL EKAE LKE+E N
Sbjct: 296 IDTKGQSNDITGMEQIVETMKAEG-IEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGN 354
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + L+ Y G +V RIW ++ N ++ I+ LK + AE
Sbjct: 355 LKENRWVCRVLLPPYAALGKADDVERIW---KVCESNPRLPEFVAAIEAYGKLKKVEEAE 411
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F + + + ++ YA L ++L ++ G TW+ Y
Sbjct: 412 AIFNKMSKTFKRLSSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLY 471
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G+++ A L+KA+ P T M + + D+ +E ++++
Sbjct: 472 VEAGEVEKADKILQKAMQQ-----SPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQS 526
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ F+ LI+ Y A + + R+K + +
Sbjct: 527 GYVSRLRQFQCLIQAYVNAKAPAYGIKERMKADNI 561
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE-MKASSIMPDSYTY 59
M K + L+++M + + +++L+ LY + G EK I+Q+ M+ S I P TY
Sbjct: 441 MLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTY 500
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
M A DI +E++ +M++ G V+ F L YV A
Sbjct: 501 MAIMDQYAKRGDIHNSEKMFHQMRQSGYVSR-LRQFQCLIQAYVNA 545
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 96/232 (41%), Gaps = 7/232 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAEA+L++M+ NL + L+ YA G + + I + +++ +P+ +
Sbjct: 339 LKEKAEAILKEMEGGNLKENRWVCRVLLPPYAALGKADDVERIWKVCESNPRLPE---FV 395
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + + AE + +M + + + +S L +Y + + K + +K++ +
Sbjct: 396 AAIEAYGKLKKVEEAEAIFNKMSKTFKRLSS-KHYSALLKVYADHKMLIKGKDLVKQMSD 454
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS-YLNMIQVLVNLKDLP 179
+ L+ LY + G + + +I + P S Y+ ++ D+
Sbjct: 455 SGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFSTYMAIMDQYAKRGDIH 514
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
+EK F + +R +I AY A +KER + PN
Sbjct: 515 NSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAK--APAYGIKERMKADNIFPN 564
>gi|449479164|ref|XP_004155523.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 201
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 4/168 (2%)
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 193
+TLY GN EVYR+W +L N YL +I L+ L D+ GAE+ KEWESG
Sbjct: 1 MTLYAAIGNKDEVYRVW-NLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDT 59
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
++D ++ N+MI +Y +G ++ AE R G +P A W+ + Y NG A +
Sbjct: 60 SFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAE 119
Query: 254 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
L+KAI +W P+ + + + + + +V+ AE + +L K
Sbjct: 120 TLKKAISVS---PPRWKPNYDILAACLEYLKTNGNVELAEEIIGLLCK 164
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 137/308 (44%), Gaps = 12/308 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A LL++M E L S+ +N+L+ K G E+ + +EM I PD YTYN+
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNML 518
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + I A + E K++G D T+ + Y +A E+ E+ +E+
Sbjct: 519 LHGLCNMGKIEEAGGLWHECKKNGNFP-DAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK 577
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGA 181
++ Y LI Y + GN+ E +R+ +R P T+ +Y ++I L N+ + A
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTS-ATYSSLIHGLSNIGLVDSA 636
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E + ++ +IG Y K G++ + + + PN T+ I +
Sbjct: 637 NQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMING 696
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ + G+MK A L + G VP + T F +E ++ A +++
Sbjct: 697 HCKLGNMKAAAKLLNEMAQKG------IVPDAVTYNALTNGFCKEGKMEEALKVCDLMST 750
Query: 302 ---AVDDL 306
++DD+
Sbjct: 751 GGISLDDI 758
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 136/331 (41%), Gaps = 29/331 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++M + +++ +N+L+ Y + G+ I +M ++ I P+S T N
Sbjct: 284 DEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSL 343
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ N + AE ++EEM G V + TF+++ F+ A + E+ RN
Sbjct: 344 IQGYCKSNQMEHAEHLLEEMLTGGGV-INQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN 402
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLN-MIQVLVNLKDLPG 180
+ L++ Q G SE +W R L F AN N +I L
Sbjct: 403 FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGF--AANTVTSNALIHGLCEAGSKEE 460
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K KE D N +I A KEG++E +LKE RRG P+ T+ +
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKW--------VPSSETIRTFMRHFEQEKDV-DG 291
G ++ A GG W P + T + + + V +G
Sbjct: 521 GLCNMGKIEEA--------------GGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ F E++ ++ V V+ LIR Y G
Sbjct: 567 EKLFQEMVTMKIEQNAV-VYGTLIRAYCENG 596
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A LL++M++ L + + + +L+ Y K G K+ +I+QEM +++ P+ TY
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + ++ A +++ EM + G + D T++ L + + + G E+A + +
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKG-IVPDAVTYNALTNGFCKEGKMEEALKVCDLMST 750
Query: 121 RNAHRDLSAYQFLI 134
D Y LI
Sbjct: 751 GGISLDDITYTTLI 764
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F++++ + G + + ++M+ + P+ TYN + L + A + E+M+
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKME 259
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
++ RV T+ L + V+ F++A LKE+ +R + Y LI Y + GN+
Sbjct: 260 KE-RVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNI 318
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
S +I + + +++ ++IQ + AE +E +G + +
Sbjct: 319 STALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSV 378
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I + R ++A R PN + +NG A++ + ++ G
Sbjct: 379 IHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 139/322 (43%), Gaps = 19/322 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K E KM+EL ++ N L+ L K +KI ++ M+ ++ P SYTY + +
Sbjct: 209 KTEETFNKMRELGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILI 267
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
NDI G +++E MK +G D T ++LA Y AGL EK E LKE+E N
Sbjct: 268 DVKGLSNDIDGMSQIVETMKAEG-CELDHLTRASLARHYAAAGLTEKTEAILKEIEGENL 326
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ L+ LY G EV RIW+ + P + L I+ LK + AE
Sbjct: 327 KENMWVCPTLLRLYAILGRADEVERIWKVCE-SKPRVEDC--LAAIEAWGRLKKIEEAEA 383
Query: 184 CFK----EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
F+ +W+ Y+ ++ Y + L ++L + G TW+
Sbjct: 384 VFEMMSNKWKLTARNYE-----SLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALV 438
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y++ G+++ A L+KA+ K P T T M + + DV AE L
Sbjct: 439 SLYVQAGEVEKADTVLQKALQQ-----NKMKPMFTTFMTIMEQYAKRGDVHNAEKIFYRL 493
Query: 300 KKAVDDLGVEVFEPLIRTYAAA 321
++A + F L + Y A
Sbjct: 494 RQANYISRISPFHALAQAYKNA 515
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 10/233 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY-TY 59
+TEK EA+L++++ NL + +L+ LYA G +++ I + ++ + D
Sbjct: 310 LTEKTEAILKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAI 369
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
W R + I AE V E M ++ A + +L IY+ + K + +K +
Sbjct: 370 EAWGR----LKKIEEAEAVFEMMSNKWKLTA--RNYESLLKIYIRHKMLNKGKDLIKTMG 423
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ + + L++LY Q G + + + ++L+ +++ +++ D+
Sbjct: 424 DSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKALQQNKMKPMFTTFMTIMEQYAKRGDV 483
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
AEK F A Y R++ A A + A ++ER + PN
Sbjct: 484 HNAEKIFYRLRQ--ANYISRISPFHALAQAYKNAKLPAYGIRERMKADNLFPN 534
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 139/322 (43%), Gaps = 19/322 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K E KM+EL ++ N L+ L K +KI ++ M+ ++ P SYTY + +
Sbjct: 258 KTEETFNKMRELGFPVTAFACNQLL-LIYKKIDKKKIADVLLMMEKENVKPSSYTYKILI 316
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
NDI G +++E MK +G D T ++LA Y AGL EK E LKE+E N
Sbjct: 317 DVKGLSNDIDGMSQIVETMKAEG-CELDHLTRASLARHYAAAGLTEKTEAILKEIEGENL 375
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ L+ LY G EV RIW+ + P + L I+ LK + AE
Sbjct: 376 KENMWVCPTLLRLYAILGRADEVERIWKVCE-SKPRVEDC--LAAIEAWGRLKKIEEAEA 432
Query: 184 CFK----EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
F+ +W+ Y+ ++ Y + L ++L + G TW+
Sbjct: 433 VFEMMSNKWKLTARNYE-----SLLKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALV 487
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y++ G+++ A L+KA+ K P T T M + + DV AE L
Sbjct: 488 SLYVQAGEVEKADTVLQKALQQ-----NKMKPMFTTFMTIMEQYAKRGDVHNAEKIFYRL 542
Query: 300 KKAVDDLGVEVFEPLIRTYAAA 321
++A + F L + Y A
Sbjct: 543 RQANYISRISPFHALAQAYKNA 564
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 10/233 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY-TY 59
+TEK EA+L++++ NL + +L+ LYA G +++ I + ++ + D
Sbjct: 359 LTEKTEAILKEIEGENLKENMWVCPTLLRLYAILGRADEVERIWKVCESKPRVEDCLAAI 418
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
W R + I AE V E M ++ A + +L IY+ + K + +K +
Sbjct: 419 EAWGR----LKKIEEAEAVFEMMSNKWKLTA--RNYESLLKIYIRHKMLNKGKDLIKTMG 472
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ + + L++LY Q G + + + ++L+ +++ +++ D+
Sbjct: 473 DSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKALQQNKMKPMFTTFMTIMEQYAKRGDV 532
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
AEK F A Y R++ A A + A ++ER + PN
Sbjct: 533 HNAEKIFYRLRQ--ANYISRISPFHALAQAYKNAKLPAYGIRERMKADNLFPN 583
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 121/306 (39%), Gaps = 48/306 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE + E+++E L +N+LM Y++ G+P I M+ PD +YN
Sbjct: 314 LCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 373
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A S AE V EEMKR G +A + L S Y +A K E +KE+
Sbjct: 374 IMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D ++ LYG+ G +++
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKM---------------------------------- 458
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
EK E E+G T DI N++I Y K G LE EEL + + P+ TW
Sbjct: 459 -EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIG 517
Query: 241 YYLRNGDMKLAVDCL---EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y R KL V CL E+ ID+G P T + + E+ V+ L
Sbjct: 518 AYSRK---KLYVKCLEVFEEMIDSG------CAPDGGTAKVLLSACSSEEQVEQVTSVLR 568
Query: 298 ILKKAV 303
+ K V
Sbjct: 569 TMHKGV 574
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 106
++ SS PD +N+ + A AE + ++ + R T++ L Y AG
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL-LESRYVPTEDTYALLIKAYCMAG 204
Query: 107 LFEKAERALKELENRNAHRD---LSAYQ-FLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
L E+AE L E++N + ++ Y ++ L + GN E +++ ++
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGC------ATYDIRVTNVMIGAYAKEGRLENA 216
+Y +++NL A K + W+ C +I ++ A+A+EG E A
Sbjct: 265 ETY----NLMINLYG--KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKA 318
Query: 217 EELKERARRRGADPNAKTWEIFSDYYLRNG 246
EE+ E+ + G +P+ + + Y R G
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 148/348 (42%), Gaps = 26/348 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMP---FNSLM-TLYAKTGHPEKIPAIIQEMKASSIMPDS 56
+ E+AE +L +M+ ++ ++ +N+ + L + G+ E+ + Q MK P +
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
TYN+ + + + ++ EM R + + T++ L + + GL EKAE +
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 117 ELENRNAHRDLSAYQFLITLYGQTG---NLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+L+ D+ Y L+ Y + G +E++ + + + P+ A SY M+
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE-PDRA--SYNIMVDAYG 380
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
AE F+E + ++ +++ AY+K + E + + G +P+
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
+ Y R G L + ++ G P + I T+ ++ G
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAE-MENG--------PCTADISTYNILI----NIYGKA 487
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 341
GFLE +++ +L + F P + T+ + R ++L ++ +EV E
Sbjct: 488 GFLERIEELFVELKEKNFRPDVVTWTS--RIGAYSRKKLYVKCLEVFE 533
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 121/306 (39%), Gaps = 48/306 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE + E+++E L +N+LM Y++ G+P I M+ PD +YN
Sbjct: 336 LCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 395
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A S AE V EEMKR G +A + L S Y +A K E +KE+
Sbjct: 396 IMVDAYGRAGLHSDAEAVFEEMKRLG-IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 454
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D ++ LYG+ G +++
Sbjct: 455 NGVEPDTFVLNSMLNLYGRLGQFTKM---------------------------------- 480
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
EK E E+G T DI N++I Y K G LE EEL + + P+ TW
Sbjct: 481 -EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIG 539
Query: 241 YYLRNGDMKLAVDCL---EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y R KL V CL E+ ID+G P T + + E+ V+ L
Sbjct: 540 AYSRK---KLYVKCLEVFEEMIDSG------CAPDGGTAKVLLSACSSEEQVEQVTSVLR 590
Query: 298 ILKKAV 303
+ K V
Sbjct: 591 TMHKGV 596
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 106
++ SS PD +N+ + A AE + ++ + R T++ L Y AG
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQL-LESRYVPTEDTYALLIKAYCMAG 226
Query: 107 LFEKAERALKELENRNAHRD---LSAYQ-FLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
L E+AE L E++N + ++ Y ++ L + GN E +++ ++
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+Y MI + + K + E S +I ++ A+A+EG E AEE+ E+
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 223 ARRRGADPNAKTWEIFSDYYLRNG 246
+ G +P+ + + Y R G
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAG 370
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 148/348 (42%), Gaps = 26/348 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMP---FNSLMT-LYAKTGHPEKIPAIIQEMKASSIMPDS 56
+ E+AE +L +M+ ++ ++ +N+ + L + G+ E+ + Q MK P +
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
TYN+ + + + ++ EM R + + T++ L + + GL EKAE +
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
Query: 117 ELENRNAHRDLSAYQFLITLYGQTG---NLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+L+ D+ Y L+ Y + G +E++ + + + P+ A SY M+
Sbjct: 346 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCE-PDRA--SYNIMVDAYG 402
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
AE F+E + ++ +++ AY+K + E + + G +P+
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
+ Y R G L + ++ G P + I T+ ++ G
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAE-MENG--------PCTADISTYNILI----NIYGKA 509
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 341
GFLE +++ +L + F P + T+ + R ++L ++ +EV E
Sbjct: 510 GFLERIEELFVELKEKNFRPDVVTWTS--RIGAYSRKKLYVKCLEVFE 555
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 145/337 (43%), Gaps = 11/337 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
KAE + KMK L ++ N L+ LY +T KI ++ MK ++ + TY +
Sbjct: 253 VHKAEKVFNKMKNLEFPITAFACNQLLLLYKRT-DKRKIADVLLLMKKENVKYSTSTYRI 311
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ NDI+G E V++ MK +G + D T S L YV GL +KA+ LKE+E
Sbjct: 312 LIDVNGLSNDITGMEEVVDSMKAEG-IKLDVETLSRLVKHYVSGGLKDKAKAILKEMEEI 370
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N+ + L+ LYG+ EV R+W + N + I LK++ A
Sbjct: 371 NSEGSRWPCRILLPLYGELQMEDEVRRLW---EICGSNPHIEECMAAIVAWGKLKNIQEA 427
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGR-LENAEELKERARRRGADPNAKTWEIFSD 240
EK F R + M+ Y ++ + L +E+ ++ G+ + T +
Sbjct: 428 EKIFDRVVKTGEKLSARHYSTMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVK 487
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y+ G+++ A L K + + P T T M + DV AE +++
Sbjct: 488 LYVEAGEVEKADSFLVKTVLQYKKK-----PMFTTYITLMDRYASRGDVPNAEKIFGMMR 542
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
K + F+ LI+ Y A + M R+K + V
Sbjct: 543 KYGYVGRLSQFQTLIQAYVNAKAPAYGMRERMKADSV 579
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 152/349 (43%), Gaps = 12/349 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K E + KMK+L + N L+ LY + +K+ ++ M+ ++ P +TY +
Sbjct: 74 VKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 132
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A DI E+VI+ M+ DG + D + +A Y+ G EKAE L+++E
Sbjct: 133 LVDTKGAARDIEDMEKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGD 191
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + + SA +F++ LY G ++V RIW+ + N ++ I+ L D+ A
Sbjct: 192 DINENRSACKFVLPLYAFLGKKADVERIWKVCEV---NARLDECMSAIEAFGKLGDVEKA 248
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F+ T N M+ YA + + +EL +R G T +
Sbjct: 249 EEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKL 308
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y G+++ A L K K P T + + ++ DV AE +++
Sbjct: 309 YSDAGEVEKADSILHKL-----SYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 363
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 349
+ ++ L+ Y A +T P + R+K + + + A LL A
Sbjct: 364 MGYTGRIRQYQLLLEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 411
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 152/349 (43%), Gaps = 12/349 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K E + KMK+L + N L+ LY + +K+ ++ M+ ++ P +TY +
Sbjct: 259 VKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 317
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A DI E+VI+ M+ DG + D + +A Y+ G EKAE L+++E
Sbjct: 318 LVDTKGATRDIEDMEKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGD 376
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + + SA +F++ LY G ++V RIW+ + N ++ I+ L D+ A
Sbjct: 377 DINENRSACKFVLPLYAFLGKKADVERIWKVCEV---NARLDECMSAIEAFGKLGDVEKA 433
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F+ T N M+ YA + + +EL +R G T +
Sbjct: 434 EEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKL 493
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y G+++ A L K K P T + + ++ DV AE +++
Sbjct: 494 YSDAGEVEKADSILHKL-----SYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 548
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 349
+ ++ L+ Y A +T P + R+K + + + A LL A
Sbjct: 549 MGYTGRIRQYQLLLEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 596
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 151/343 (44%), Gaps = 3/343 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++KM+EL S + +N L+ + G + I + MKA P TY++ M+ A
Sbjct: 189 MKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEAN 248
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
++I G + + MK+ G V + ++ LA + A L+ AE +E+E + S
Sbjct: 249 EHNIDGVLKAFDGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWS 307
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
L+ LYG+ G E+ R W +R F + + SYL + + +L AE+ + E
Sbjct: 308 TLDILMILYGRLGKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEELWLEM 366
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
++ + N ++ Y K+G +E A + G PN+ T+ + + M
Sbjct: 367 KNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLM 426
Query: 249 KLAVDCLEKAIDTGRGDG-GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
K A+ +E ++ G P ET + + F ++ DV+ +E E +K A +
Sbjct: 427 KEALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRY 486
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
V+ L + Y A P + +R+ + S LL+ +
Sbjct: 487 AFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLV 529
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L +MK + + FNSL+++Y K G EK + +EM + P+S TY
Sbjct: 357 DRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHL 416
Query: 63 MRALAAVNDISGAERVIE---EMKRDGRVAAD--W--TTFSNLASIYVEAGLFEKAERAL 115
A + A + IE +K + + W TT S + + E G E +E+
Sbjct: 417 ALGCAKAKLMKEALKNIEMGLNLKTSKSIGSSTPWLETTLS-IIECFAEKGDVENSEKLF 475
Query: 116 KELENRNAHRDLSAYQFLITLY 137
+E++N +R Y L Y
Sbjct: 476 EEVKNAKYNRYAFVYNALFKAY 497
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 152/349 (43%), Gaps = 12/349 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K E + KMK+L + N L+ LY + +K+ ++ M+ ++ P +TY +
Sbjct: 239 VKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 297
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A DI E+VI+ M+ DG + D + +A Y+ G EKAE L+++E
Sbjct: 298 LVDTKGAARDIEDMEKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGD 356
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + + SA +F++ LY G ++V RIW+ + N ++ I+ L D+ A
Sbjct: 357 DINENRSACKFVLPLYAFLGKKADVERIWKVCEV---NARLDECMSAIEAFGKLGDVEKA 413
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F+ T N M+ YA + + +EL +R G T +
Sbjct: 414 EEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKL 473
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y G+++ A L K K P T + + ++ DV AE +++
Sbjct: 474 YSDAGEVEKADSILHKL-----SYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 528
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 349
+ ++ L+ Y A +T P + R+K + + + A LL A
Sbjct: 529 MGYTGRIRQYQLLLEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 576
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 152/349 (43%), Gaps = 12/349 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K E + KMK+L + N L+ LY + +K+ ++ M+ ++ P +TY +
Sbjct: 259 VKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 317
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A DI E+VI+ M+ DG + D + +A Y+ G EKAE L+++E
Sbjct: 318 LVDTKGAARDIEDMEKVIQAMQADG-IEPDLLIQATIARHYIFGGYREKAEAILEQIEGD 376
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + + SA +F++ LY G ++V RIW+ + N ++ I+ L D+ A
Sbjct: 377 DINENRSACKFVLPLYAFLGKKADVERIWKVCEV---NARLDECMSAIEAFGKLGDVEKA 433
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F+ T N M+ YA + + +EL +R G T +
Sbjct: 434 EEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKL 493
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y G+++ A L K K P T + + ++ DV AE +++
Sbjct: 494 YSDAGEVEKADSILHKL-----SYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 548
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 349
+ ++ L+ Y A +T P + R+K + + + A LL A
Sbjct: 549 MGYTGRIRQYQLLLEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 596
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 151/343 (44%), Gaps = 3/343 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++KM+EL S + +N L+ + G + I + MKA P TY++ M+ A
Sbjct: 210 MKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEAN 269
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
++I G + + MK+ G V + ++ LA + A L+ AE +E+E + S
Sbjct: 270 EHNIDGVLKAFDGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWS 328
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
L+ LYG+ G E+ R W +R F + + SYL + + +L AE+ + E
Sbjct: 329 TLDILMILYGRLGKEKELARTWNVIR-GFHHVRSKSYLLATEAFARVGNLDRAEELWLEM 387
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
++ + N ++ Y K+G +E A + G PN+ T+ + + M
Sbjct: 388 KNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLM 447
Query: 249 KLAVDCLEKAIDTGRGDG-GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
K A+ +E ++ G P ET + + F ++ DV+ +E E +K A +
Sbjct: 448 KEALKNIEMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRY 507
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
V+ L + Y A P + +R+ + S LL+ +
Sbjct: 508 AFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLV 550
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L +MK + + FNSL+++Y K G EK + +EM + P+S TY
Sbjct: 378 DRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHL 437
Query: 63 MRALAAVNDISGAERVIE---EMKRDGRVAAD--W--TTFSNLASIYVEAGLFEKAERAL 115
A + A + IE +K + + W TT S + + E G E +E+
Sbjct: 438 ALGCAKAKLMKEALKNIEMGLNLKTSKSIGSSTPWLETTLS-IIECFAEKGDVENSEKLF 496
Query: 116 KELENRNAHRDLSAYQFLITLY 137
+E++N +R Y L Y
Sbjct: 497 EEVKNAKYNRYAFVYNALFKAY 518
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 66/105 (62%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE L E++KE N+ + + +N +MTLY G EK+ +++E+K ++PD +TYN
Sbjct: 167 LAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYN 226
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
+W+ + AA DI G R+++EM + W + NLA+IY+ A
Sbjct: 227 LWVSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMA 271
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 133/333 (39%), Gaps = 41/333 (12%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE +M+E+ L + F SL+ +A+TG+ + +I QEM + P TY V++
Sbjct: 126 AELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYIN 185
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK-------------- 110
AL + AER+ + + D ++ + Y +AG F +
Sbjct: 186 ALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVP 245
Query: 111 ------------------AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
AE L+ ++ D+ Y LI Y + + E + ++R
Sbjct: 246 MTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFRE 305
Query: 153 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
+ + + I+Y ++ K++ GAE FK DIR ++ AYA G
Sbjct: 306 MVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGN 365
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 272
++ AE L +R ++ G +PN T+ Y D+ + E G P+
Sbjct: 366 MKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAG------IKPN 419
Query: 273 SETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 305
S +R F Q++D + A L KK +D
Sbjct: 420 STIFTLLVRTFGQQEDFESA---LSWFKKMLDS 449
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE+L + M + + +L+ YA TG+ +K +++ MK + + P+ TY
Sbjct: 332 EGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTL 391
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ +V+DI+ + E++++ G + + T F+ L + + FE A K++ +
Sbjct: 392 MQGYTSVHDINAMLQTFEDLQKAG-IKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSG 450
Query: 123 AHRD 126
D
Sbjct: 451 CPAD 454
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + +M L S + +N+L+ YAK E ++ + M PD +Y
Sbjct: 297 EEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTL 356
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A ++ AER+++ MK+ G + + T+ L Y + ++L+
Sbjct: 357 LAAYANTGNMKKAERLLKRMKQAG-LEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAG 415
Query: 123 AHRDLSAYQFLITLYGQ 139
+ + + L+ +GQ
Sbjct: 416 IKPNSTIFTLLVRTFGQ 432
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 39/220 (17%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE EKM++L + P+NS+++LY+ + K+ I++EMK +++ DS T N +
Sbjct: 164 KAEYTFEKMRKLGMLLRPSPYNSMVSLYSSLRNRNKVDEILREMKENNLELDSPTVNNAL 223
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R AAV D++ ++ + ADW + L L LE A
Sbjct: 224 RVYAAVCDVATMDKFL----------ADWNAITTL--------------EWLTTLEMAKA 259
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA---NISYLNMIQVLVNLKDLPG 180
+R LI LYG+ G +VYRIW + NT N + +I L+ L D+ G
Sbjct: 260 YR-------LIRLYGEAGEREDVYRIWD----LYKNTKEKDNEGFRALIGSLLKLDDING 308
Query: 181 AEKC-FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
AEK + EWES +D+R+ +++ Y +G ++ A++L
Sbjct: 309 AEKIYYDEWESSGLEFDLRIPTMLMSGYRAKGMVKKADKL 348
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 164/362 (45%), Gaps = 25/362 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSM-PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
M E AE +++++ +G S+ P++ +++ Y G + ++ E+K S + D Y
Sbjct: 148 MLEDAEKTMQELR--GIGIKSLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFY 205
Query: 60 NVWMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ + A + D+ E V+ EM+ G + D +A IY+ +GL K+ER L+ L
Sbjct: 206 TILLAARDSFGGDMVAVEDVLAEMEGRG-LKLDAVGCLAVAGIYLRSGLRHKSERVLQRL 264
Query: 119 ENRNAHRDL----SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
E + S + ++ ++G+ G+ V RIW S+ + T ++ I+
Sbjct: 265 EKSLKSGEFKYSNSIRRRMLAMFGKLGDRDAVDRIWHSIERSASTTVE-DFIFGIEAFGR 323
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ + AE + GC + + R+ N + ++G + A L ER + + T
Sbjct: 324 VGKMDEAEDMY--MRVGCNSCNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVT 381
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK--WV-PSSETIRTFMRHFEQEKDVDG 291
+ + YL+ GD+ A A ++ R GK W PSSET+ + F DV
Sbjct: 382 YHLLIKVYLKAGDVSRAT----LAFESLRSAFGKLEWPRPSSETLAVMLEFFVGTGDVQA 437
Query: 292 AEGFLEILKKAVDD---LGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE 348
+E ++KK ++D L VF L+R YA G R+ VE + +++LL
Sbjct: 438 SE---RLVKKWMEDGFPLSAAVFHSLVRVYAKGGAGVDNFPGRMLSAGVEPTRETEQLLR 494
Query: 349 AI 350
I
Sbjct: 495 QI 496
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L ++K + + +N ++ + K G +K+ +I+EM + PD +++N + A A
Sbjct: 85 LFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYA 144
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+V MK G V D T++ L ++ + + ++A +E+ D
Sbjct: 145 MSRKPERGLQVFSNMKAAG-VLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDF 203
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+++YG+ G +++ I+ L+L ++Y ++I ++ L + K F +
Sbjct: 204 FVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQ 263
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
E+ D+ + N MI AYAK G + +A L R +G PN ++ I + +L G
Sbjct: 264 MEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGH 323
Query: 248 MKLAV 252
++ A+
Sbjct: 324 VEEAL 328
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L ++K + + +N ++ + K G +K+ +I+EM + PD +++N + A A
Sbjct: 85 LFLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYA 144
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+V MK G V D T++ L ++ + + ++A +E+ D
Sbjct: 145 MSRKPERGLQVFSNMKAAG-VLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDF 203
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+++YG+ G +++ I+ L+L ++Y ++I ++ L + K F +
Sbjct: 204 FVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQ 263
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
E+ D+ + N MI AYAK G + +A L R +G PN ++ I + +L G
Sbjct: 264 MEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGFLHAGH 323
Query: 248 MKLAVDCLEKAIDTGRGD 265
+ A+ + G D
Sbjct: 324 VDEALAAYASMSEAGFKD 341
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 1/251 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L M + + +N+L+ K G + I+ EM +I+P+ TY+
Sbjct: 313 EAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTM 372
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A V + A + EMK G V D +++ L S+Y + G FE+A KE+EN
Sbjct: 373 IDGYAKVGRLDDALNMFNEMKFLG-VGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAG 431
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+D+ Y L+ YG+ EV R++ ++ + ++Y +I V A
Sbjct: 432 IRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAM 491
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+E++ D+ + + +I A K G +E++ L + + G PN T+ D +
Sbjct: 492 EVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAF 551
Query: 243 LRNGDMKLAVD 253
R+ + VD
Sbjct: 552 GRSASAQCVVD 562
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 113/288 (39%), Gaps = 37/288 (12%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A+A+ + + G + F++L++ Y ++G+ + + MK++ +MP+ TYN
Sbjct: 206 VELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNA 265
Query: 62 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER------- 113
+ A + + + M +G V D TF++L ++ GL+E A R
Sbjct: 266 VIDACGKGGVEFKKVVEIFDGMLSNG-VQPDRITFNSLLAVCSRGGLWEAARRLFSAMVD 324
Query: 114 ----------------------------ALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
+ E+ +N ++ Y +I Y + G L +
Sbjct: 325 KGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDD 384
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++ ++ +SY ++ V L A KE E+ D+ N ++
Sbjct: 385 ALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLA 444
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
Y K+ R + + E +R PN T+ D Y + G K A++
Sbjct: 445 GYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAME 492
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 151/349 (43%), Gaps = 12/349 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + KMK+L S N L+ LY + +K+ ++ M+ ++ P +TY +
Sbjct: 259 VKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 317
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A DI E+VI+ M+ DG + D + +A Y+ G EKAE L+++
Sbjct: 318 LVDTKGAARDIEDMEKVIQAMQADG-IEPDLLFQATIARHYIFGGYREKAEAILEQMVGD 376
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + + SA +F++ LY G +V RIW ++ N ++ I+ L D+ A
Sbjct: 377 DINENRSACKFVLPLYAFLGKNDDVERIW---KVCEANARLDECMSAIEAFGKLGDVEKA 433
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F T + N M+ YA + + +EL +R G T +
Sbjct: 434 EEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVKL 493
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y G+++ A L K K P T + + ++ DV AE +++
Sbjct: 494 YSDAGEVEKADSILHKL-----SYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 548
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 349
+ ++ L+ Y A +T P + R+K + + + A LL A
Sbjct: 549 MGYTGRIRQYQLLLEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 596
>gi|302811145|ref|XP_002987262.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
gi|300144897|gb|EFJ11577.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
Length = 564
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 163/362 (45%), Gaps = 25/362 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSM-PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
M E AE +++++ +G S+ P++ +++ Y G + ++ E+K S + D Y
Sbjct: 115 MLEDAEKTMQELR--GIGIKSLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFY 172
Query: 60 NVWMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ + A + D+ E V+ EM+ G + D +A IY+ +GL K+ER L+ L
Sbjct: 173 TILLAARDSFGGDMVAVEDVLAEMEGRG-LKLDAVGCLAVAGIYLRSGLRHKSERVLQRL 231
Query: 119 ENRNAHRDL----SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
E + S + ++ ++G+ G+ V RIW S+ + T ++ I+
Sbjct: 232 EKSLKSGEFKDSNSIRRRMLAMFGKLGDRDAVDRIWHSIERSASTTVE-DFIFGIEAFGR 290
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ + AE + GC + + R+ N + ++G + A L ER + + T
Sbjct: 291 VGKMDEAEDMYMR--VGCNSCNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVT 348
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK--WV-PSSETIRTFMRHFEQEKDVDG 291
+ + YL+ GD+ A A ++ R GK W PSSET+ + F DV
Sbjct: 349 YHLLIKVYLKAGDVSRAT----LAFESLRSAFGKLEWPRPSSETLAVMLEFFVGIGDVQA 404
Query: 292 AEGFLEILKKAVDD---LGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLE 348
+E ++KK ++D L VF L R YA G R+ VE + +++LL
Sbjct: 405 SE---RLVKKWMEDGFPLSAAVFHSLFRVYAKGGAGVDNFPGRMLSAGVEPTRETEQLLR 461
Query: 349 AI 350
I
Sbjct: 462 QI 463
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 3/343 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++KM+EL S + +N L+ + G + I + MKA P TY++ M+ A
Sbjct: 191 MKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEAN 250
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
++I G + + MK+ G V + ++ LA + A L+ AE +E+E + S
Sbjct: 251 EHNIDGVLKAFDGMKKAG-VEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSVTGNNWS 309
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
L+ LYG+ G E+ R W +R F + + SYL + + +L AE+ + E
Sbjct: 310 TLDILMILYGRLGKEKELVRTWNVIR-GFHHVRSKSYLLATEAFAQVGNLDRAEELWLEM 368
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
++ + N ++ Y K+G +E A + G PN+ T+ + + M
Sbjct: 369 KNVRGLKETEQFNSLLSVYCKDGLIEKAIGVFREMMGDGFKPNSITYRHLALGCAKAKLM 428
Query: 249 KLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
K A+ +E + + + P ET + + F ++ DV+ +E E +K A +
Sbjct: 429 KEALKNIEMGSNLKTSNSIRSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRY 488
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
V+ L + Y A P + +R+ + S LL+ +
Sbjct: 489 AFVYNALFKAYVKAKVYDPNLFKRMVLGGARPDAESYSLLKLV 531
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L +MK + + FNSL+++Y K G EK + +EM P+S TY
Sbjct: 359 DRAEELWLEMKNVRGLKETEQFNSLLSVYCKDGLIEKAIGVFREMMGDGFKPNSITYRHL 418
Query: 63 MRALAAVNDISGAERVIE-----EMKRDGRVAADW--TTFSNLASIYVEAGLFEKAERAL 115
A + A + IE + R + W TT S + + E G E +E+
Sbjct: 419 ALGCAKAKLMKEALKNIEMGSNLKTSNSIRSSTPWLETTLS-IIECFAEKGDVENSEKLF 477
Query: 116 KELENRNAHRDLSAYQFLITLY 137
+E++N +R Y L Y
Sbjct: 478 EEVKNAKYNRYAFVYNALFKAY 499
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 5/232 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ K G + I+ EM IMP+ TY+ + A + A + EMK
Sbjct: 329 YNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMK 388
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ D +++ L SIY + G FE+A KE+E+ +D Y L+ YG+ G
Sbjct: 389 F-ASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKY 447
Query: 144 SEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
EV R++ ++ FPN ++Y +I V A + F+E++ D+ + +
Sbjct: 448 EEVKRVFEEMKAERIFPNL--LTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 505
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
+I A K G +E+A + + G PN T+ D + R+G + +D
Sbjct: 506 ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 112/281 (39%), Gaps = 37/281 (13%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A+ + E G + F++L++ Y ++G+ ++ + + MK+S + P+ TYN
Sbjct: 201 VELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNA 260
Query: 62 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A D + A + +EM R+G V D TF++L ++ GL+E A E+
Sbjct: 261 VIDACGKGGVDFNRAAEIFDEMLRNG-VQPDRITFNSLLAVCGRGGLWEAARNLFSEMLY 319
Query: 121 RNAHRDLSAYQFL-----------------------------------ITLYGQTGNLSE 145
R +D+ Y L I Y + G L E
Sbjct: 320 RGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDE 379
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++ ++ A +SY ++ + L A KE ES D N ++G
Sbjct: 380 ALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLG 439
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
Y K+G+ E + + E + PN T+ D Y + G
Sbjct: 440 GYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGG 480
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + ++M+ + ++ +N+L+ Y K G E++ + +EMKA I P+ TY+
Sbjct: 413 EEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTL 472
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A V E K+ G + AD +S L + GL E A L E+
Sbjct: 473 IDVYSKGGLYQEAMEVFREFKKAG-LKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG 531
Query: 123 AHRDLSAYQFLITLYGQTGN 142
++ Y +I +G++G+
Sbjct: 532 IRPNVVTYNSIIDAFGRSGS 551
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 107/286 (37%), Gaps = 10/286 (3%)
Query: 40 IPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE-EMKRDGRVAADWTTFSNL 98
I +++ ++ D YT+ +R L + + A R E ++R+ R S +
Sbjct: 134 IDSVLLNFESRLCGSDDYTF--LLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLASAM 191
Query: 99 ASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 158
SI G E A+ + N + A+ LI+ YG++G E +++ +++ +
Sbjct: 192 ISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGL 251
Query: 159 NTANISYLNMIQVLVNLK-DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 217
++Y +I D A + F E D N ++ + G E A
Sbjct: 252 KPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAAR 311
Query: 218 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 277
L RG + + T+ D + G M LA + + +P+ T
Sbjct: 312 NLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK------HIMPNVVTYS 365
Query: 278 TFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
T + + + +D A +K A L + L+ YA GR
Sbjct: 366 TVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGR 411
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 11/294 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL+KM E + +N+L++ K G E+ + EM I PD++TYN+
Sbjct: 508 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 567
Query: 63 MRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + + A + E K RD + + T+ + Y +A E+ E+ EL +
Sbjct: 568 IHGMCRIGKLDEAVNLWNECKSRD--LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 625
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N + Y LI Y + GN E +++ +R +Y ++I + N+ + A
Sbjct: 626 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E ++ +IG Y K G+++ + + PN T+ + D
Sbjct: 686 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 745
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
Y ++GDMK A L + + G VP + T F +E ++ EGF
Sbjct: 746 YSKSGDMKTAAKLLHEMVGKG------IVPDTVTYNVLTNGFCKEGKIE--EGF 791
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 138/324 (42%), Gaps = 13/324 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++L++ E + + +N+L+ Y K G+ I +M + I P+S T N +
Sbjct: 334 EANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSII 393
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + + AE ++EEM G + + F+ + FE A R L+E+ RN
Sbjct: 394 QGFCKIGQMEQAECILEEMLSRG-FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLN-MIQVLVNLKDLPGA 181
+ L+ + G S+ +W R L F AN+ N +I L ++ A
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF--GANLVTTNALIHGLCKTGNMQEA 510
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ K+ D N +I KEG++E +L+ ++G +P+ T+ +
Sbjct: 511 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 570
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF-EQEKDVDGAEGFLEILK 300
R G + AV+ + VP+ T + + + +K +G + F E+L
Sbjct: 571 MCRIGKLDEAVNLWNEC------KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 624
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRT 324
+ + +L V+ LIR Y G T
Sbjct: 625 QNL-ELNSVVYNTLIRAYCRNGNT 647
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 2/221 (0%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ + + + P T + +L N++ + V E M++ V+ D FS +
Sbjct: 198 GVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG--VSPDVYLFSTAINA 255
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + G E A + ++E ++ Y LI + GNL E +R + N
Sbjct: 256 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
I+Y +I L+ L+ A KE T + V N +I Y K G L +A ++
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+G +PN+ T + + G M+ A LE+ + G
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 93/225 (41%), Gaps = 36/225 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ E L ++ NL +S+ +N+L+ Y + G+ + + +M++ I P + TY+
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 672
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + + A+ +I+EM+++G + + ++ L Y + G +K L+E+ + +
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEG-LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
H + Y +I Y ++G D+ A
Sbjct: 732 IHPNKITYTVMIDGYSKSG-----------------------------------DMKTAA 756
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
K E D NV+ + KEG++E ++ + + G
Sbjct: 757 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEG 801
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 36/274 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F++ + + K G E + +M+ + P+ TYN + L ++ A R E+M
Sbjct: 249 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 308
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+DG V A T+S L + ++ F +A LKE + + Y LI Y + GNL
Sbjct: 309 KDG-VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 367
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-------GCATYD 196
+ RI + N +++ ++IQ + + AE +E S G T
Sbjct: 368 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 427
Query: 197 IR----------------------------VTNVMIGAYAKEGRLENAEELKERARRRGA 228
I + ++G KEG+ +A EL R +G
Sbjct: 428 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 487
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
N T + G+M+ AV L+K ++ G
Sbjct: 488 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +A L + M+ + ++ ++SL+ G E +I EM+ ++P+ Y
Sbjct: 647 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 706
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + V++EM + + T++ + Y ++G + A + L E+ +
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMS-SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D Y L + + G + E ++I
Sbjct: 766 GIVPDTVTYNVLTNGFCKEGKIEEGFKI 793
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K +L++M ++ + + + ++ Y+K+G + ++ EM I+PD+ TYNV
Sbjct: 718 DKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVL 777
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 99
I ++ + M ++G + D T++ L
Sbjct: 778 TNGFCKEGKIEEGFKICDYMSQEG-LPLDEITYTTLV 813
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 168/357 (47%), Gaps = 21/357 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM--PDSYT 58
M EKA +++K++EL L S+ + L+ G +IPA++ E ++ + P
Sbjct: 176 MLEKAVVVMDKIRELGL-VSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLN 234
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE- 117
++W++ D+SG E ++EE++ GR A W T+ +AS Y++AG EKA AL
Sbjct: 235 THLWIKRRHG--DLSGMEEIVEELELMGRSNA-W-TYIFIASAYIQAGFPEKAHAALGAA 290
Query: 118 ---LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
+ N + Y ++ LYG ++ + R+W L + P A ++L MI+ L +
Sbjct: 291 EAGIRNGRFKKQRKVYNKILLLYGLLKDMEGIERVWGILN-SRPLVAVHNHLFMIEALGS 349
Query: 175 LKDLPGAEKCFKEWESGC--ATYDIRVTNVMIGAYAKEGRLENAEE-LKERARRRGADPN 231
++ AE+ F+E C + R VM GAY K G ++ A E L + + A P
Sbjct: 350 AGNIGRAEEIFEELRK-CRGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPV 408
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVD 290
+ + F Y++ + A++ E+ R K W ET+ M + + DV
Sbjct: 409 PELYHYFIKGYIKRNEKDWAIEAYEEGQSLVRYRSTKLWY---ETMLEVMSIYAERGDVT 465
Query: 291 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
A + KA + +F L +TY A + +++R+ M E ++ ++L+
Sbjct: 466 SALAMFKHC-KACKHRDIRMFTLLFKTYVVAKEPAHGLIKRMVMLGFEPNDEIRELI 521
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 11/289 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ +L++M E L + +N+L+ K G E+ + +EM PD+YTYN
Sbjct: 518 EEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFL 577
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ LA + I R++ E K G V + T++ L Y +A E A + K L+
Sbjct: 578 MKGLADMGKIDDVHRLLHEAKEYGFVPNVY-TYALLLEGYCKADRIEDAVKFFKNLDYEK 636
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
Y LI Y + GN++E +++ ++ R P A +Y ++I + + +
Sbjct: 637 VELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCA--TYSSLIHGMCCIGRVDE 694
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A++ F+E + ++ +IG + K G+++ + G PN T+ I D
Sbjct: 695 AKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMID 754
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 289
Y + G+MK A + L + I G P + T + + +E+++
Sbjct: 755 GYCKLGNMKEARELLNEMIRNG------IAPDTVTYNALQKGYCKEREL 797
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 130/328 (39%), Gaps = 12/328 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A +L +M + + + FN+L+ Y + G + + EM + P+ T+N
Sbjct: 340 MFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFN 399
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ N + AE+V+ + G ++ + S + +E F A + + +L +
Sbjct: 400 TLLQGFCRSNQMEQAEQVLVYILSSG-LSVNMDVCSYVIHRLMERSGFVSALKIVTKLLS 458
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLP 179
N S L+ + SE +W L AN N ++ L ++
Sbjct: 459 GNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNME 518
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
+ K+ D N +I K G++E A +LKE ++ P+ T+
Sbjct: 519 EVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYN--- 575
Query: 240 DYYLRNG--DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+L G DM +D + + + + G +VP+ T + + + ++ A F +
Sbjct: 576 --FLMKGLADMG-KIDDVHRLLHEAKEYG--FVPNVYTYALLLEGYCKADRIEDAVKFFK 630
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
L +L V+ LI Y G +
Sbjct: 631 NLDYEKVELSSVVYNILIAAYCRIGNVT 658
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 150/343 (43%), Gaps = 10/343 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A+ +++KM E + M FNSL+ + K G+ + ++ M A + P+ TY+
Sbjct: 107 MVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYS 166
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L A+ V+EEMK G V D T+S L +A E+AE+ L+ +
Sbjct: 167 ALIDGLCKSQKFLEAKEVLEEMKASG-VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 225
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y +I + ++G L E + + +R + ++Y +I L L +
Sbjct: 226 SGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAE 285
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A+ + ESG D+ + +I K L A++L +R + G +P+ T+
Sbjct: 286 AQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 345
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
D + G ++ A L+ G P+ T T + + + VD AE +E +
Sbjct: 346 DGLCKCGRLEEAEYLLQGMKRAG------CAPNVVTYTTLISGLCKARKVDEAERVMEEM 399
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEKVEVS 340
+ A + + ++ +GR + +++R+K + E S
Sbjct: 400 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECS 442
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 110/235 (46%), Gaps = 2/235 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE +L +M + ++S++ + K+G + +QEM+ PD TYN
Sbjct: 214 EEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTV 273
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + I+ A+ ++++M+ G V D T+S + + ++ + +A++ L +
Sbjct: 274 IDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG 333
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ D+ Y +I + G L E + + ++ A ++Y +I L + + AE
Sbjct: 334 CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAE 393
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR--RRGADPNAKTW 235
+ +E + ++ N M+ GR++ A++L +R + R P+A T+
Sbjct: 394 RVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 448
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 140/316 (44%), Gaps = 8/316 (2%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++ ++ + + + + +L+ +A+ E+ +++EM+ P+ TYNV + AL
Sbjct: 45 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
++ + A+ V+++M +G A + TF++L + + G + A + L + + ++
Sbjct: 105 LSMVGAAQDVVKKMI-EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 163
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
Y LI ++ E + ++ + +Y +I L + AE+ +
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223
Query: 189 E-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
SGC T D+ V + +I A+ K G+L A++ + R++ P+ T+ D + G
Sbjct: 224 AGSGC-TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 282
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
+ A L++ ++ G +P T T + + + A+ L+ + KA +
Sbjct: 283 IAEAQVILDQMQES-----GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPD 337
Query: 308 VEVFEPLIRTYAAAGR 323
V + +I GR
Sbjct: 338 VVTYTTIIDGLCKCGR 353
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 106/281 (37%), Gaps = 45/281 (16%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
+++EMK++ PD++T+ + A+A D+ GA + M D V T++ L + +
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNV----VTYTALIAAF 67
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
A E+A + L+E+ R +L Y L
Sbjct: 68 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVL----------------------------- 98
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+ L L + A+ K+ G ++ N ++ + K G +++A +L
Sbjct: 99 ------VDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGI 152
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
+G PN T+ D ++ A + LE+ +G P + T +
Sbjct: 153 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG------VTPDAFTYSALIHG 206
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ ++ AE L + + V V+ +I + +G+
Sbjct: 207 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 247
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 141 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
G+L + ++ A ++ +I + N DL GA + GC + T
Sbjct: 4 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM--GCDPNVVTYT 61
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
+I A+A+ +LE A +L E R RG PN T+ + D + + A D ++K I+
Sbjct: 62 -ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
G + P+ T + + F + +VD A L I+
Sbjct: 121 ------GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIM 153
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A+ LL++M + + + +++ K G E+ ++Q MK + P+ TY
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 377
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + AERV+EEM+ G + T++ + + +G ++A++ ++ +++
Sbjct: 378 TLISGLCKARKVDEAERVMEEMRNAG-CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 436
Query: 121 RNAH--RDLSAYQFLI 134
A D + Y+ ++
Sbjct: 437 GRAECSPDAATYRTIV 452
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 151/349 (43%), Gaps = 12/349 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + KMK+L S N L+ LY + +K+ ++ M+ ++ P +TY +
Sbjct: 259 VKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRVDK-KKLGDVLTMMEKENVKPSLFTYKL 317
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A DI E+VI+ M+ DG + D + +A Y+ G EK+E L+++
Sbjct: 318 LVDTKGAARDIEDMEKVIQAMQADG-IEPDLLFQATIARHYIFGGYREKSEAILEQMVGD 376
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + + SA +F++ LY G +V RIW ++ N ++ I+ L D+ A
Sbjct: 377 DINENRSACKFVLPLYAFLGKNDDVERIW---KVCEANARLDECMSAIEAFGKLGDVEKA 433
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F T + N M+ YA + + +EL +R G T +
Sbjct: 434 EEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVKL 493
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y G+++ A L K K P T + + ++ DV AE +++
Sbjct: 494 YSDAGEVEKADSILHKL-----SYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQ 548
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPVMLR-RLKMEKVEVSEASKKLLEA 349
+ ++ L+ Y A +T P + R+K + + + A LL A
Sbjct: 549 MGYTGRIRQYQLLLEAYLNA-KTPPYGFKERMKADDIFPNRAVASLLAA 596
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 5/253 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L +M + + +N+L+ K G + I+ EM I+P+ TY+
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTM 369
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
A + A + EMK G + D +++ L SIY + G FE A + KE+ +
Sbjct: 370 ADGYAKAGRLEDALNLYNEMKFLG-IGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPG 180
+D+ Y L+ YG+ G +EV R+++ ++ FPN ++Y +I V
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNL--LTYSTLIDVYSKGSLYEE 486
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F+E++ D+ + + +I A K G +++A L + + G PN T+ D
Sbjct: 487 AMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIID 546
Query: 241 YYLRNGDMKLAVD 253
+ R+ + VD
Sbjct: 547 AFGRSTTAEFLVD 559
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 6/248 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A+ + E G + F++L++ Y K+G+ ++ + + MK S + P+ TYN
Sbjct: 203 VELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNA 262
Query: 62 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + + EEM R+G V D T+++L ++ GL+E A E+ +
Sbjct: 263 VIDACGKGGVEFKRVVEIFEEMLRNG-VQPDRITYNSLLAVCSRGGLWEAARNLFNEMID 321
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
R +D+ Y L+ + G + Y I + + PN ++Y M L
Sbjct: 322 RGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNV--VTYSTMADGYAKAGRL 379
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + E + D N ++ YAK GR E+A ++ + G + T+
Sbjct: 380 EDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNAL 439
Query: 239 SDYYLRNG 246
D Y + G
Sbjct: 440 LDGYGKQG 447
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A ++L KM +L S + F SL+ + +++ M S P+ YN +
Sbjct: 119 ALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLID 178
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L D++ A ++ EM++ GR+AAD T++ L + +G + +A R L+++ R +
Sbjct: 179 CLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRIN 238
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ + LI + + GNL E +++ + + ++Y ++I L L A+K
Sbjct: 239 PDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKT 298
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F S ++ N +I + K R+E+ +L +R R G + T+ Y +
Sbjct: 299 FDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQ 358
Query: 245 NGDMKLAVDCLEKAIDTG 262
G +++A D + G
Sbjct: 359 VGKLRVAKDIFSWMVSCG 376
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 5/252 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++ M EL L + + +N+++ K I M+ I+ D+ TYN
Sbjct: 702 QEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTL 761
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A R++ +M + ++ + F+ L +V+ G +A+ KE+ R+
Sbjct: 762 ISGLCNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
H ++ Y LI + G L + ++ + + FP+ ++Y +I K +
Sbjct: 821 VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDV--VTYNTLITGFCKSKRVED 878
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
K F E D N +I Y + G+L A+++ R G P+ T+ I D
Sbjct: 879 GMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLD 938
Query: 241 YYLRNGDMKLAV 252
NG ++ A+
Sbjct: 939 CLCNNGKIEKAL 950
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +L M + + F +L+ + K G+ ++ + ++M SSI P++ TYN +
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLI 283
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + A++ + M G + T++ L + + ++ E + + +
Sbjct: 284 NGLCMHGRLYHAKKTFDLMASKG-CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y LI Y Q G L I+ + I++ ++ L ++ A
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F + SG I N+MI K ++E A EL R G P+A+T+ I
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462
Query: 244 RNG 246
+NG
Sbjct: 463 KNG 465
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +N+L+T + K+ E + EM ++ D++TYN + ++ A++V
Sbjct: 861 VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M D V D T++ L G EKA +++L+ D+ Y +I +
Sbjct: 921 MV-DCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRND 979
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+ E + ++RSL I+Y+ MI L
Sbjct: 980 KVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 89/231 (38%), Gaps = 13/231 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ L ++M + ++G +++ +NSL+ G M + P+ TYN
Sbjct: 258 DEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTL 317
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ + M R+G V D T++ L Y + G A+ + +
Sbjct: 318 INGFCKSRRVEDGMKLFQRMYREGLV-GDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG 376
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + L+ G + + +R + YL ++ + + L A+
Sbjct: 377 VTPDIITHCILLHGLCVNGEIGSAMVKFNDMR------SGEKYLGIVAYNIMIHGLCKAD 430
Query: 183 KCFKEWESGC------ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
K + WE C D R +MI K G A+EL R + G
Sbjct: 431 KVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 119/310 (38%), Gaps = 18/310 (5%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
S + F L+T A E + Q+M+ I D Y++ + + + +S A ++
Sbjct: 64 SVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSIL 123
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
+M + G TF +L + A + + ++ Y LI +
Sbjct: 124 GKMMKLG-YDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182
Query: 140 TGNLSEVYRIWRSL----RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
G+++ + + RLA ++Y ++ L + A + ++
Sbjct: 183 NGDVNIALELLNEMEKKGRLA---ADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINP 239
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D+ +I A+ K+G L+ A+EL ++ + PN T+ + +G + A
Sbjct: 240 DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHA---- 295
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKA-VDDLGVEVFEP 313
+K D G P+ T T + F + + V DG + F + ++ V D +
Sbjct: 296 KKTFDLMASKG--CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD--TFTYNT 351
Query: 314 LIRTYAAAGR 323
LI Y G+
Sbjct: 352 LIHGYCQVGK 361
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 5/253 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L +M + + +N+L+ K G + I+ EM I+P+ TY+
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTM 369
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
A + A + EMK G + D +++ L SIY + G FE A + KE+ +
Sbjct: 370 ADGYAKAGRLEDALNLYNEMKFLG-IGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPG 180
+D+ Y L+ YG+ G +EV R+++ ++ FPN ++Y +I V
Sbjct: 429 VKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNL--LTYSTLIDVYSKGSLYEE 486
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F+E++ D+ + + +I A K G +++A L + + G PN T+ D
Sbjct: 487 AMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIID 546
Query: 241 YYLRNGDMKLAVD 253
+ R+ + VD
Sbjct: 547 AFGRSTTAEFLVD 559
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 6/248 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A+ + E G + F++L++ Y K+G+ ++ + + MK S + P+ TYN
Sbjct: 203 VELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNA 262
Query: 62 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + + EEM R+G V D T+++L ++ GL+E A E+ +
Sbjct: 263 VIDACGKGGVEFKRVVEIFEEMLRNG-VQPDRITYNSLLAVCSRGGLWEAARNLFNEMID 321
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
R +D+ Y L+ + G + Y I + + PN ++Y M L
Sbjct: 322 RGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNV--VTYSTMADGYAKAGRL 379
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + E + D N ++ YAK GR E+A ++ + G + T+
Sbjct: 380 EDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNAL 439
Query: 239 SDYYLRNG 246
D Y + G
Sbjct: 440 LDGYGKQG 447
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 151/343 (44%), Gaps = 10/343 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A+ +++KM E + M FNSL+ + K G+ + ++ M A + P+ TY+
Sbjct: 229 MVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYS 288
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L A+ V+EEMK G V D T+S L +A E+AE+ L+ +
Sbjct: 289 ALIDGLCKSQKFLEAKEVLEEMKTRG-VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 347
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y +I + ++G L E + + +R + ++Y +I L L +
Sbjct: 348 SGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAE 407
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A+ ++ ESG D+ + +I K L A++L +R + G +P+ T+
Sbjct: 408 AQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 467
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
D + G ++ A L+ G P+ T T + + + VD AE +E +
Sbjct: 468 DGLCKCGRLEEAEYLLQGMKRAG------CAPNVVTYTTLISGLCKARKVDEAERVMEEM 521
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEKVEVS 340
+ A + + ++ +GR + +++R+K + E S
Sbjct: 522 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECS 564
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 110/235 (46%), Gaps = 2/235 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE +L +M + ++S++ + K+G + +QEM+ PD TYN
Sbjct: 336 EEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTV 395
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + I+ A+ ++E+M+ G V D T+S + + ++ + +A++ L +
Sbjct: 396 IDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAG 455
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ D+ Y +I + G L E + + ++ A ++Y +I L + + AE
Sbjct: 456 CNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAE 515
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR--RRGADPNAKTW 235
+ +E + ++ N M+ GR++ A++L +R + R P+A T+
Sbjct: 516 RVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 570
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 136/315 (43%), Gaps = 6/315 (1%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++ ++ + + + + +L+ +A+ E+ +++EM+ P+ TYNV + AL
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
++ + A+ V+++M +G A + TF++L + + G + A + L + + ++
Sbjct: 227 LSMVGAAQDVVKKMI-EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
Y LI ++ E + ++ +Y +I L + AE+ +
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
T D+ V + +I A+ K G+L A++ + R++ P+ T+ D + G +
Sbjct: 346 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 405
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 308
A LE+ ++ G +P T T + + + A+ L+ + KA + V
Sbjct: 406 AEAQVILEQMQES-----GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDV 460
Query: 309 EVFEPLIRTYAAAGR 323
+ +I GR
Sbjct: 461 VTYTTIIDGLCKCGR 475
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 121/308 (39%), Gaps = 12/308 (3%)
Query: 18 GFSSMPF--NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
GFS F NSL+ + + + + + +S PD +YN+ + D+ A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
++EEMK G A D T + + + AG + A+ L + ++ Y LI
Sbjct: 132 LELLEEMKSAG-FAPDAFTHTPIITAMANAGDLDG---AMDHLRSMGCDPNVVTYTALIA 187
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
+ + L E ++ +R ++Y ++ L L + A+ K+ G
Sbjct: 188 AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 247
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
++ N ++ + K G +++A +L +G PN T+ D ++ A + L
Sbjct: 248 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 307
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
E+ G P + T + + ++ AE L + + V V+ +I
Sbjct: 308 EEMKTRG------VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 361
Query: 316 RTYAAAGR 323
+ +G+
Sbjct: 362 HAFCKSGK 369
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A+ LL++M + + + +++ K G E+ ++Q MK + P+ TY
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + AERV+EEM+ G + T++ + + +G ++A++ ++ +++
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAG-CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 558
Query: 121 RNAH--RDLSAYQFLI 134
A D + Y+ ++
Sbjct: 559 GRAECSPDAATYRTIV 574
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 168/357 (47%), Gaps = 21/357 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM--PDSYT 58
M EKA +++K++EL L S+ + L+ G +IPA++ E ++ + P
Sbjct: 163 MLEKAVVVMDKIRELGL-VSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLN 221
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE- 117
++W++ D+SG E ++EE++ GR A W T+ +AS Y++AGL EKA AL
Sbjct: 222 THLWIKRRHG--DLSGMEEIVEELELMGRSNA-W-TYIFIASAYIQAGLPEKAHAALGAA 277
Query: 118 ---LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
+ N + Y ++ LYG + + R+W L + P A ++L MI+ L +
Sbjct: 278 EAGIRNGRFKKQRKVYNKILLLYGLLKDTEGIERVWGILN-SRPLVAVHNHLFMIEALGS 336
Query: 175 LKDLPGAEKCFKEWESGC--ATYDIRVTNVMIGAYAKEGRLENAEE-LKERARRRGADPN 231
++ AE+ F+E C + R VM GAY K G ++ A E L + + A P
Sbjct: 337 AGNIGRAEEIFEELRK-CRGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPV 395
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDVD 290
+ + F Y++ + A++ E+ R K W ET+ M + + DV
Sbjct: 396 PELYHYFIKGYIKRNEKDWAIEAYEEGQSLVRYRSTKLWY---ETMLEVMSIYAERGDVT 452
Query: 291 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
A + KA + +F L +TY A + +++R+ M E ++ ++L+
Sbjct: 453 SALAMFKHC-KACKHRDIRMFTLLFKTYVVAKEPAHGLIKRMVMLGFEPNDEIRELI 508
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 141/320 (44%), Gaps = 19/320 (5%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E + KMK+L+L ++ N L+ LY K +KI ++ M+ ++ P +TY + + +
Sbjct: 263 EKIFNKMKDLDLPLTAFACNQLLLLYKKL-DKKKIADVLLLMEKENVKPSLFTYRILIDS 321
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
NDI+G E+V E MK +G D + LA Y +GL EKAE LKE+E N
Sbjct: 322 KGQSNDIAGMEQVFETMKEEG-FEPDIQIQALLARHYTSSGLKEKAEAMLKEMEGENLKE 380
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
+ L+ LY G EV RIW+ + P + L ++ L + AE F
Sbjct: 381 NQWVCATLLRLYANLGKADEVERIWKVCE-SKPRVEDC--LAAVEAWGKLNKIEEAEAVF 437
Query: 186 ----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K+W+ Y +V++ YA L +EL + G TW+
Sbjct: 438 EMVSKKWKLNSKNY-----SVLLKIYANNKMLTKGKELVKLMADSGVRIGPLTWDALVKL 492
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y++ G+++ A L KAI + P T + + + DV +E +++
Sbjct: 493 YIQAGEVEKADSILHKAIQQ-----NQLQPMFTTYLAILEQYAKRGDVHNSEKIFLKMRQ 547
Query: 302 AVDDLGVEVFEPLIRTYAAA 321
A + F+ LI+ Y A
Sbjct: 548 AGYTSRISQFQVLIQAYVNA 567
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAEA+L++M+ NL + +L+ LYA G +++ I + ++ + D
Sbjct: 362 LKEKAEAMLKEMEGENLKENQWVCATLLRLYANLGKADEVERIWKVCESKPRVEDCLAA- 420
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +N I AE V E + + ++ + +S L IY + K + +K + +
Sbjct: 421 --VEAWGKLNKIEEAEAVFEMVSKKWKLNS--KNYSVLLKIYANNKMLTKGKELVKLMAD 476
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ L+ LY Q G + + I ++++ +YL +++ D+
Sbjct: 477 SGVRIGPLTWDALVKLYIQAGEVEKADSILHKAIQQNQLQPMFTTYLAILEQYAKRGDVH 536
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAY 207
+EK F + T I V+I AY
Sbjct: 537 NSEKIFLKMRQAGYTSRISQFQVLIQAY 564
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 149/338 (44%), Gaps = 21/338 (6%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAE + KMK+L + N L+ LY + +KI ++ M+ + P +TY +
Sbjct: 261 VKKAEEVFNKMKDLGFPVTVFAINQLLLLYKRVDK-KKISDVLTMMEKEDVKPSLFTYKL 319
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A DI G E+V++ M+ +G + D + +A Y+ G EKAE L+ +E
Sbjct: 320 LVDTKGASRDIEGMEKVVQSMEAEG-ITPDLLLQATIAKHYIFGGHREKAEAILESMEG- 377
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + +A + ++ LY G +V RIW+ + NT L+ I+ L D+ A
Sbjct: 378 DMKENRNACKMVMPLYAFLGKKDDVERIWKVCQ---SNTRLDECLSAIEAFGRLGDVEKA 434
Query: 182 EKC----FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
E+ FK W++ + Y N M+ YA + ++ +EL +R G T +
Sbjct: 435 EEVFGNMFKTWKTLSSKY----YNAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDS 490
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y+ G+++ A L K K P + + + + DV +E
Sbjct: 491 LVKLYVDAGEVEKAESLLHKL-----SVKNKMKPQYSSYLMLLDSYSKIGDVHNSEKVFS 545
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 335
L++ + + ++ L+ Y A +PV R +M+
Sbjct: 546 KLRQMGYNGRIRQYQLLLHAYLHA--KAPVYGFRERMK 581
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 8/251 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE + +++K+L L + N ++ LY + P K+ +++ M+ ++ P ++TY +
Sbjct: 262 QKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIA-PGKVASVLMLMEKENVKPSAFTYRLL 320
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
+ ND++G E VI EMK G + +T + +A Y+ GL EKAE +KE+E +
Sbjct: 321 IDLKGRSNDLAGIEVVINEMKAYG-IEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQL 379
Query: 122 -NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N+ + L+ LY ++V RIW +L+ I+ L +
Sbjct: 380 SNSKDGRHVIKSLLHLYAALNKPNDVARIWEMCTEPMLE----DFLSAIKAWGELGLIEK 435
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F+ + + N M+ YA+ L ++ ER R G TW+ +
Sbjct: 436 AEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALIN 495
Query: 241 YYLRNGDMKLA 251
Y+ +G+++ A
Sbjct: 496 LYVNSGEVEKA 506
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 108/275 (39%), Gaps = 36/275 (13%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K ++L M++ N+ S+ + L+ L ++ I +I EMKA I P + T +
Sbjct: 297 KVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVINEMKAYGIEPSTSTQTMVA 356
Query: 64 RALAAVNDISGAERVIEEMK------RDGR------------------VAADWTT----- 94
R AE V++EM+ +DGR VA W
Sbjct: 357 RFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWEMCTEPM 416
Query: 95 ---FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR-IW 150
F + + E GL EKAE + + N Y ++ +Y Q LS+ + +
Sbjct: 417 LEDFLSAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVE 476
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN--VMIGAYA 208
R R PN +++ +I + VN ++ A+ T+ ++ YA
Sbjct: 477 RMCRDGCPN-GPLTWDALINLYVNSGEVEKADSFLLNVAEENPDRKPLFTSYFFLMKGYA 535
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
K G + N E++ +R + G P + + + Y+
Sbjct: 536 KRGDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYV 570
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 130/263 (49%), Gaps = 6/263 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTYNV 61
E A+ +++KMKE L S+ +N+L+ Y G P++ ++ M ++ P+ TYN+
Sbjct: 159 EDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNM 218
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+RAL + +IS A V+ +M G + D TF+ +A+ Y + G +AE + E++
Sbjct: 219 LIRALCKMENISEAWNVVYKMTASG-MQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRN 277
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYR-IWRSLRLAFPNTANISYLN-MIQVLVNLKDLP 179
+ + +I+ Y + G + E R ++R L N+ LN ++ V++ D
Sbjct: 278 SLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGM--QPNLIVLNSLVNGFVDMMDRD 335
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G ++ K E D+ + ++ A+++ G LE +E+ + G P+A + I +
Sbjct: 336 GVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILA 395
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
Y+R +M+ A + L +G
Sbjct: 396 KGYVRAQEMEKAEEMLTVMTKSG 418
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 121/297 (40%), Gaps = 8/297 (2%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
+M + K+G P++ I Q + P TY + AL ++ + +
Sbjct: 78 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIV-SLVEEK 136
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
++ D F+ L + + E+G E A++ +++++ Y LI YG G E
Sbjct: 137 QMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDES 196
Query: 147 YRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++ + N+ NM I+ L ++++ A + + D+ N +
Sbjct: 197 MKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIAT 256
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AYA+ G+ AE + +R PN +T I Y R G ++ A+ + + D G
Sbjct: 257 AYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLG--- 313
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P+ + + + F D DG + L+++++ V + ++ ++ AG
Sbjct: 314 ---MQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAG 367
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 94/213 (44%), Gaps = 1/213 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN++ T YA+ G + A+I EM+ +S+ P+ T + + + A R + MK
Sbjct: 251 FNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMK 310
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + ++L + +V+ + + LK +E D+ Y ++ + Q G L
Sbjct: 311 DLG-MQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFL 369
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ I+ ++ + +Y + + V +++ AE+ ++ + +
Sbjct: 370 EKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTV 429
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
I + GR++NA + ++ G PN KT+E
Sbjct: 430 ISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFE 462
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A + +MK+L + + + NSL+ + + + +++ M+ I PD TY+
Sbjct: 300 QEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTI 359
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A + + + + M + G V D +S LA YV A EKAE L +
Sbjct: 360 MNAWSQAGFLEKCKEIYNNMLKSG-VKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSG 418
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIW 150
H ++ + +I+ + G + R++
Sbjct: 419 VHPNVVIFTTVISGWCSVGRMDNAMRVF 446
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L+ M+E + + ++++M +++ G EK I M S + PD++ Y++ +
Sbjct: 340 VLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYV 399
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ AE ++ M + G V + F+ + S + G + A R ++ +L
Sbjct: 400 RAQEMEKAEEMLTVMTKSG-VHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNL 458
Query: 128 SAYQFLITLYGQ 139
++ LI Y +
Sbjct: 459 KTFETLIWGYAE 470
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 10/291 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++KA+ L M++ + + +LM +A+ G+ + I E+++ +PD YTYN
Sbjct: 213 SDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNA 272
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + +GA+ V + M G V D +++ L + AGL A+ ++
Sbjct: 273 LLEAYSRGEHPTGAKEVFQAMVEAG-VRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEA 331
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ ++ L++ Y + G ++E R+ R + + + +++ N +
Sbjct: 332 GFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEM 391
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E + S A DI N +I AYA+ G +E AEE+ +G P+ +W
Sbjct: 392 ESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGA 451
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM---RHFEQEKDV 289
Y + + V +K + G +P T + F+ R EQ K+V
Sbjct: 452 YAQRKLFRKCVSIFQKMVKAG------CIPDRATAKVFLSSCRSPEQVKEV 496
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 7/257 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE + +++ + +N+L+ Y++ HP + Q M + + PD +YN+ +
Sbjct: 250 RAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILI 309
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A + A+ V + MK G + L S Y +AG +AER ++E+EN
Sbjct: 310 DAFGRAGLTADAQAVYDSMKEAG-FKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGV 368
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLN-MIQVLVNLKDLPG 180
D + L++ YG +G + E+ + S+ +A P+ IS LN +I +
Sbjct: 369 KPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPD---ISTLNTLINAYAQGGYIEK 425
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F ES T D+ ++GAYA+ + ++ + G P+ T ++F
Sbjct: 426 AEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLS 485
Query: 241 YYLRNGDMKLAVDCLEK 257
+K D +E+
Sbjct: 486 SCRSPEQVKEVTDMIER 502
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 130/328 (39%), Gaps = 16/328 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY------ 57
+AE MK+ + FN L+ Y++ EK + EMK S+ P +
Sbjct: 101 EAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFS 160
Query: 58 ---TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
TYN ++ L +S AE +M++ G + A TF+ + +IY +A +KA+
Sbjct: 161 GIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPA-VNTFTIMINIYGKAYYSDKADDL 219
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
+ + +L Y L+ + + GN I+ L+ +Y +++
Sbjct: 220 FRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSR 279
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ GA++ F+ D N++I A+ + G +A+ + + + G P K+
Sbjct: 280 GEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKS 339
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 294
+ Y + G + A E+ + G K P + + + + +D E
Sbjct: 340 HMLLLSSYAKAGKVTEA----ERLVREIENSGVK--PDTFMFNSLLSAYGNSGRIDEMES 393
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAG 322
LE + +V + LI YA G
Sbjct: 394 LLESMVSSVAKPDISTLNTLINAYAQGG 421
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+T A+A+ + MKE + L++ YAK G + +++E++ S + PD++ +N
Sbjct: 317 LTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFN 376
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A I E ++E M D +T + L + Y + G EKAE LE+
Sbjct: 377 SLLSAYGNSGRIDEMESLLESMV-SSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLES 435
Query: 121 RNAHRDLSAYQFLITLYGQ 139
+ D+ ++ L+ Y Q
Sbjct: 436 KGLTPDVMSWTSLMGAYAQ 454
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
S + FN ++ Y + EK +I M+ ++PD ++YN ++ LA+ + A+
Sbjct: 512 LSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFY 571
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+ +M+ + ++ +D + + S +++ G E AE KE+ N D+ Y LI +
Sbjct: 572 LMKMQ-ETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFA 630
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
GN+ E +LR A + Y ++I++ + L A++ +K ++ D+
Sbjct: 631 DVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVY 690
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
+N MI Y++ ++ AEE+ E +R+G D N ++ + Y R G +K A ++K
Sbjct: 691 SSNCMIDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKM 749
Query: 259 IDTG 262
+ G
Sbjct: 750 RELG 753
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 115/256 (44%), Gaps = 2/256 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ KA+ L KM+E L +P+ ++++ + K G E + +EM ++ PD Y
Sbjct: 564 LPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYG 623
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A V ++ A + ++ G + + +++L +Y + G E+A+ A K L+
Sbjct: 624 ILINAFADVGNVREAVNYVNALRNAG-LPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQA 682
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ + +I LY + + + I+ SL+ + S+ M+ + + L
Sbjct: 683 SEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRK-GDANEFSFAMMLCMYKRIGKLKE 741
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + ++ D+ N ++G YA +GR ++A + P+ T++
Sbjct: 742 AFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGV 801
Query: 241 YYLRNGDMKLAVDCLE 256
++ G K AV LE
Sbjct: 802 VLVKCGIPKQAVGKLE 817
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 46/290 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +L++KM+EL + +N L++L+AK + ++ + ++MK + + PD +Y
Sbjct: 358 EEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTL 417
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE--- 119
+ A + + + AE ++ EM G + D T S L +Y+EAG+ +K+ +
Sbjct: 418 LYAFSIRHLVGEAEILVSEMDERG-LEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEG 476
Query: 120 ---------NRNAH-------------------RDLSAYQF--LITLYGQTGNLSEVYRI 149
N +A+ R LS +F +I YG + + ++
Sbjct: 477 NMSSECYSANIDAYGERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQL 536
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF------KEWESGCATYDIRVTNVM 203
S+ SY ++IQ+L + DLP K + + S C Y +
Sbjct: 537 IDSMENHGVLPDKFSYNSLIQILAS-ADLPHKAKFYLMKMQETQLVSDCIPY-----CAV 590
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
I ++ K G+LE AE L + P+ + I + + G+++ AV+
Sbjct: 591 ISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVN 640
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 45/321 (14%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
+++ FN+++ + G E+ +++Q+M+ PD+ TYN+ + A N+I A
Sbjct: 340 NTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYF 399
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
++MK + R+ D ++ L + L +AE + E++ R D L +Y +
Sbjct: 400 KKMK-EARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIE 458
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
G L + + +R L N ++ Y I + AEK F C ++
Sbjct: 459 AGMLKKSWLWFRRFHLE-GNMSSECYSANIDAYGERGHILEAEKAFL-----CCKESRKL 512
Query: 200 T----NVMIGAYAKEGRLENAEELKERARRRGADPNAKTW----EIFSD---------YY 242
+ NVMI AY R E A +L + G P+ ++ +I + Y
Sbjct: 513 SVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYL 572
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKK 301
++ + +L DC +P I +F++ + E AEG F E++
Sbjct: 573 MKMQETQLVSDC---------------IPYCAVISSFIKLGQLEM----AEGLFKEMIGY 613
Query: 302 AVDDLGVEVFEPLIRTYAAAG 322
V V V+ LI +A G
Sbjct: 614 NVQP-DVVVYGILINAFADVG 633
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 90/240 (37%), Gaps = 45/240 (18%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+L ++M + + + +L+ +Y+K G E+ + M + PD T V
Sbjct: 213 HHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGV- 271
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ Y +AG F+KAE+ K +
Sbjct: 272 -----------------------------------VVQTYKKAGEFKKAEQFFKNWSLES 296
Query: 123 A---HRDLSAYQF--LITLYGQTGNLSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNL 175
A H LS+Y + LI YG+ G L E W PNT +++ MI + N
Sbjct: 297 ASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNT--VTFNTMIHICGNH 354
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
L A ++ E D R N++I +AK ++ A ++ + +P+ ++
Sbjct: 355 GQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSY 414
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/244 (18%), Positives = 88/244 (36%), Gaps = 37/244 (15%)
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
YN+ +R L E + +EM G + +T+ L +Y + GL E+A L +
Sbjct: 199 YNIMLRILGKARKWHHVESLWDEMMSRGITPVN-STYGTLIDVYSKGGLTEEALHWLDRM 257
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ D ++ Y + G + + +++ L + ++
Sbjct: 258 NKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQPHV--------------- 302
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
C + TY N +I Y K G+L A + R G PN T+
Sbjct: 303 -----CLSSY-----TY-----NTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTM 347
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+G ++ A ++K + + P + T + + ++D A + +
Sbjct: 348 IHICGNHGQLEEAASLMQKMEEL------RCPPDTRTYNILISLHAKHNNIDRAASYFKK 401
Query: 299 LKKA 302
+K+A
Sbjct: 402 MKEA 405
>gi|115471209|ref|NP_001059203.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|34394024|dbj|BAC84055.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113610739|dbj|BAF21117.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|117380751|gb|ABK34463.1| DNA-binding protein [Oryza sativa Japonica Group]
Length = 411
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 8/251 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE + +++K+L L + N ++ LY + P K+ +++ M+ ++ P ++TY +
Sbjct: 63 QKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIA-PGKVASVLMLMEKENVKPSAFTYRLL 121
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
+ ND++G E V+ EMK G + +T + +A Y+ GL EKAE +KE+E +
Sbjct: 122 IDLKGRSNDLAGIEVVLNEMKAYG-IEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQL 180
Query: 122 -NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N+ + L+ LY ++V RIW +L+ I+ L +
Sbjct: 181 SNSKDGRHVIKSLLHLYAALNKPNDVARIWEMCTEPMLE----DFLSAIKAWGELGLIEK 236
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F+ + + N M+ YA+ L ++ ER R G TW+ +
Sbjct: 237 AEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALIN 296
Query: 241 YYLRNGDMKLA 251
Y+ +G+++ A
Sbjct: 297 LYVNSGEVEKA 307
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
S + FN ++ Y + EK +I M+ ++PD ++YN ++ LA+ + A+
Sbjct: 531 LSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFY 590
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+ +M+ + ++ +D + + S +++ G E AE KE+ N D+ Y LI +
Sbjct: 591 LMKMQ-ETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFA 649
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
GN+ E +LR A + Y ++I++ + L A++ +K ++ D+
Sbjct: 650 DVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVY 709
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
+N MI Y++ ++ AEE+ E +R+G D N ++ + Y R G +K A ++K
Sbjct: 710 SSNCMIDLYSERSMVKQAEEIFESLKRKG-DANEFSFAMMLCMYKRIGKLKEAFQIVQKM 768
Query: 259 IDTG 262
+ G
Sbjct: 769 RELG 772
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 115/256 (44%), Gaps = 2/256 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ KA+ L KM+E L +P+ ++++ + K G E + +EM ++ PD Y
Sbjct: 583 LPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYG 642
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A V ++ A + ++ G + + +++L +Y + G E+A+ A K L+
Sbjct: 643 ILINAFADVGNVREAVNYVNALRNAG-LPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQA 701
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ + +I LY + + + I+ SL+ + S+ M+ + + L
Sbjct: 702 SEVGPDVYSSNCMIDLYSERSMVKQAEEIFESLKRK-GDANEFSFAMMLCMYKRIGKLKE 760
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + ++ D+ N ++G YA +GR ++A + P+ T++
Sbjct: 761 AFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGTFKEMIEAAIQPDDCTFKSLGV 820
Query: 241 YYLRNGDMKLAVDCLE 256
++ G K AV LE
Sbjct: 821 VLVKCGIPKQAVGKLE 836
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 46/290 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +L++KM+EL + +N L++L+AK + ++ + ++MK + + PD +Y
Sbjct: 377 EEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTL 436
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE--- 119
+ A + + + AE ++ EM G + D T S L +Y+EAG+ +K+ +
Sbjct: 437 LYAFSIRHLVGEAEILVSEMDERG-LEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEG 495
Query: 120 ---------NRNAH-------------------RDLSAYQF--LITLYGQTGNLSEVYRI 149
N +A+ R LS +F +I YG + + ++
Sbjct: 496 NMSSECYSANIDAYGERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQL 555
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF------KEWESGCATYDIRVTNVM 203
S+ SY ++IQ+L + DLP K + + S C Y +
Sbjct: 556 IDSMENHGVLPDKFSYNSLIQILAS-ADLPHKAKFYLMKMQETQLVSDCIPY-----CAV 609
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
I ++ K G+LE AE L + P+ + I + + G+++ AV+
Sbjct: 610 ISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVN 659
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 45/321 (14%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
+++ FN+++ + G E+ +++Q+M+ PD+ TYN+ + A N+I A
Sbjct: 359 NTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYF 418
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
++MK + R+ D ++ L + L +AE + E++ R D L +Y +
Sbjct: 419 KKMK-EARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIE 477
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
G L + + +R L N ++ Y I + AEK F C ++
Sbjct: 478 AGMLKKSWLWFRRFHLE-GNMSSECYSANIDAYGERGHILEAEKAFL-----CCKESRKL 531
Query: 200 T----NVMIGAYAKEGRLENAEELKERARRRGADPNAKTW----EIFSD---------YY 242
+ NVMI AY R E A +L + G P+ ++ +I + Y
Sbjct: 532 SVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYL 591
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKK 301
++ + +L DC +P I +F++ + E AEG F E++
Sbjct: 592 MKMQETQLVSDC---------------IPYCAVISSFIKLGQLEM----AEGLFKEMIGY 632
Query: 302 AVDDLGVEVFEPLIRTYAAAG 322
V V V+ LI +A G
Sbjct: 633 NVQP-DVVVYGILINAFADVG 652
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 91/237 (38%), Gaps = 20/237 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+L ++M + + + +L+ +Y+K G E+ + M + PD T V
Sbjct: 213 HHVESLWDEMMSRGITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVV 272
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + AE+ + + + T A+ VE+
Sbjct: 273 VQTYKKAGEFKKAEQFFKNWSLGKTLKDEGKTSEPTATSAVESA--------------SQ 318
Query: 123 AHRDLSAYQF--LITLYGQTGNLSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNLKDL 178
H LS+Y + LI YG+ G L E W PNT +++ MI + N L
Sbjct: 319 PHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNT--VTFNTMIHICGNHGQL 376
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A ++ E D R N++I +AK ++ A ++ + +P+ ++
Sbjct: 377 EEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSY 433
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 87/249 (34%), Gaps = 28/249 (11%)
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
YN+ +R L E + +EM G + +T+ L +Y + GL E+A L +
Sbjct: 199 YNIMLRILGKARKWHHVESLWDEMMSRGITPVN-STYGTLIDVYSKGGLTEEALHWLDRM 257
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ D ++ Y + G + + +++ L LKD
Sbjct: 258 NKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLG----------------KTLKDE 301
Query: 179 -----PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
P A + N +I Y K G+L A + R G PN
Sbjct: 302 GKTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTV 361
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ +G ++ A ++K + + P + T + + ++D A
Sbjct: 362 TFNTMIHICGNHGQLEEAASLMQKMEEL------RCPPDTRTYNILISLHAKHNNIDRAA 415
Query: 294 GFLEILKKA 302
+ + +K+A
Sbjct: 416 SYFKKMKEA 424
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 11/291 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++++M E L + +N+L+ + G E + +EM I PD YTYN +
Sbjct: 483 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLL 542
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R L V + A ++ +E K G + ++ T+ + Y +A E E EL ++
Sbjct: 543 RGLCNVGKLDDAIKLWDEFKASGLI-SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKM 601
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y +I + Q GN++ ++ +++ PN A +Y ++I + N+ + A
Sbjct: 602 ELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCA--TYSSLIHGVCNIGLVEDA 659
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E ++ +IG Y K G+++ AE PN T+ + D
Sbjct: 660 KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 719
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
Y + G+M+ A + L K ++G VP T F + D+D A
Sbjct: 720 YCKLGNMEKANNLLIKMKESG------IVPDVVTYNVLTNGFCKANDMDNA 764
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 136/353 (38%), Gaps = 12/353 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K +L++M + + FN+L+ Y K G+ E I M + +I P S T
Sbjct: 307 DKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL 366
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ + I AE +EE+ G +S + + + A R K + +RN
Sbjct: 367 MQGFCKSDQIEHAENALEEILSSGLSIHPDNCYS-VVHWLCKKFRYHSAFRFTKMMLSRN 425
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L+ + G E +W L + ++ +I L LP A
Sbjct: 426 FRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEAS 485
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ KE D N +I + EG++E L+E +RG P+ T+
Sbjct: 486 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 545
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKK 301
G + A+ K D + G + + T M + + ++ E F E+L K
Sbjct: 546 CNVGKLDDAI----KLWDEFKASG--LISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 599
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEAS-KKLLEAIC 351
+ +L V+ +I+ + G + +L +K + + + A+ L+ +C
Sbjct: 600 KM-ELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 651
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ AE+ +M N+ + + ++ Y K G+ EK ++ +MK S I+PD TYNV
Sbjct: 692 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 751
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 99
ND+ A +V ++M +G + D T++ L
Sbjct: 752 TNGFCKANDMDNAFKVCDQMATEG-LPVDEITYTTLV 787
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
EV+R+ A P+ S+ N+I L + A + F + E + ++ N +
Sbjct: 206 CEVFRVMS--EGACPDV--FSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCI 261
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA-VDCLEKAIDTG 262
I + GRL+NA ELKE+ +G PN KT+ L NG +KL D + +D
Sbjct: 262 INGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGA-----LINGLIKLNFFDKVNHILDEM 316
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
G G + P+ + + + +++GA
Sbjct: 317 IGAG--FNPNVVVFNNLIDGYCKMGNIEGA 344
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A+ L+++M++ + + + +L+ Y K G + + EM + +I P+ +TY
Sbjct: 655 LVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYT 714
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + + ++ A ++ +MK G + D T++ L + + +A + A + ++
Sbjct: 715 VMIDGYCKLGNMEKANNLLIKMKESG-IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMAT 773
Query: 121 RNAHRDLSAYQFLI 134
D Y L+
Sbjct: 774 EGLPVDEITYTTLV 787
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +++ K G E + +M+ I P+ TYN + L + A + E+M
Sbjct: 223 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 282
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T+ L + ++ F+K L E+ + ++ + LI Y + GN+
Sbjct: 283 VKG-VQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNI 341
Query: 144 SEVYRI 149
+I
Sbjct: 342 EGALKI 347
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 14/163 (8%)
Query: 182 EKC---FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
EKC F+ G TNV I A K G++ENA EL + + G PN T+
Sbjct: 203 EKCCEVFRVMSEGACPDVFSFTNV-INALCKGGKMENAIELFMKMEKLGISPNVVTYNCI 261
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+ +NG + A + EK G P+ +T + + D L+
Sbjct: 262 INGLCQNGRLDNAFELKEKMTVKGVQ------PNLKTYGALINGLIKLNFFDKVNHILDE 315
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSE 341
+ A + V VF LI Y G LK++ V +S+
Sbjct: 316 MIGAGFNPNVVVFNNLIDGYCKMGNIEGA----LKIKDVMISK 354
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 140/337 (41%), Gaps = 44/337 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A LL +M+E+ F +L+ A+ G E A++ E+K S + PD YNV
Sbjct: 199 ERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVC 258
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A + E+K G + D +++++ + +AG +AE ++E
Sbjct: 259 IDCFGKAGNVDMAWKFFHELKSQG-LKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETER 317
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
A AY +I YG G Y++ L R P+ +S+ +++ L + +
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSV--VSFNSILTCLGKKRKVDE 375
Query: 181 AEKCF----KEWESGCATYDIRV------------------------------TNVMIGA 206
A F K+ E +TY+I + N+M+
Sbjct: 376 ALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDR 435
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
K + E A E+ E A +RG +PN+ T+ D + G++ A E +DTG
Sbjct: 436 LCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGH--N 493
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
V + IR F H +E DG + F E+ ++
Sbjct: 494 ANPVVYTSLIRNFFMHGRKE---DGHKIFKEMNRRGC 527
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 1/230 (0%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E +LE+M L G + L++ +T + +I M+ P Y V + A
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
+A A ++ +M+ G F+ L G E A + E++
Sbjct: 192 MAEARQPERALELLRQMQEVG-YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEP 250
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D+ Y I +G+ GN+ ++ + L+ ++SY +MI VL L AE+ F
Sbjct: 251 DIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELF 310
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ E+ A N MI Y G+ ENA +L ++ + RG P+ ++
Sbjct: 311 GQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSF 360
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 5/257 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
+ A L E M L+ G ++ P + SL+ + G E I +EM PD
Sbjct: 477 VDDAYRLFENM--LDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLL 534
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N +M + D+ + E++K G + D ++S L +AG + ++
Sbjct: 535 NTYMDCVFKAGDVEKGRAIFEDIKGYGFLP-DVRSYSILIHGLTKAGQARETSSIFHAMK 593
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ D AY ++ + ++G L + Y + +++ +Y ++I L + L
Sbjct: 594 QQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLD 653
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F+E +S ++ V + +I + K GR++ A + E ++G PN TW
Sbjct: 654 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 713
Query: 240 DYYLRNGDMKLAVDCLE 256
D ++ ++ A+ C +
Sbjct: 714 DALVKAEEINEALICFQ 730
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E+ K + + + ++SL+ + K G ++ I++EM + P+ YT+N
Sbjct: 653 DEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 712
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M AL +I+ A + MK + + + + T+S L + + KA +E++ +
Sbjct: 713 MDALVKAEEINEALICFQSMK-EMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 771
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
++ Y +I + GN+++ ++ +
Sbjct: 772 LVPNVVTYTTMIAGLAKVGNITDACSLFERFK 803
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 137/307 (44%), Gaps = 21/307 (6%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN LM Y +T + MK +P ++NV M A + + AERV+ EMK
Sbjct: 104 FNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMK 163
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ + T++ + ++G ++ AE +E++NR ++ + +I +YG+ +
Sbjct: 164 -ESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHS 222
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ +++S+R A + +Y +I + AE+ F E +S DI N +
Sbjct: 223 AKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNAL 282
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG---DMKLAVDCLEKAID 260
+ AY++ G A+E+ E G + ++ I D + R G D + D ++K
Sbjct: 283 LEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKV-- 340
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIR 316
+ P+ ++ + F + V AE F+ + ++ +GVE +F L+
Sbjct: 341 -------GFKPTMKSHILLLSAFVKAGRVTDAENFV----RRLESMGVEPDTFMFNSLLG 389
Query: 317 TYAAAGR 323
Y +GR
Sbjct: 390 AYGNSGR 396
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 122/291 (41%), Gaps = 10/291 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ KAE L + M++ S + +L+ +A+ G+ + I E+++ +PD YTYN
Sbjct: 222 SAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNA 281
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + +GA+ V E M G V AD +++ L + AGL A+ ++
Sbjct: 282 LLEAYSRGGHPAGAKEVFETMLEAG-VKADHVSYNILIDAFGRAGLISDAQAIYDSMKKV 340
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ ++ L++ + + G +++ R L + +++ N +
Sbjct: 341 GFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKM 400
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E ++ + DI N +I YA+ G +E AEE+ +G P+ +W
Sbjct: 401 ESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGA 460
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM---RHFEQEKDV 289
Y + + V +K + G +P T + + R EQ K+V
Sbjct: 461 YSKRKLYRKCVSVYQKMLIAG------CIPDRATAKVLLSSCRGPEQVKEV 505
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 127/319 (39%), Gaps = 7/319 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE MK+ + FN LM Y++ G E+ ++ EMK S+ P TYN ++
Sbjct: 119 EAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYL 178
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L AE V EM+ G V TF+ + +IY +A KAE + +
Sbjct: 179 EVLNKSGSWQLAEDVFREMQNRG-VPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALC 237
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
L Y LI + + GN I+ L+ +Y +++ GA++
Sbjct: 238 PPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKE 297
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+ D N++I A+ + G + +A+ + + ++ G P K+ + ++
Sbjct: 298 VFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFV 357
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ G + A + + + G P + + + + +D E E ++ +V
Sbjct: 358 KAGRVTDAENFVRRLESMGVE------PDTFMFNSLLGAYGNSGRMDKMESLYESMQGSV 411
Query: 304 DDLGVEVFEPLIRTYAAAG 322
+ LI YA G
Sbjct: 412 CKPDIITLNTLINVYAQGG 430
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE + KMK+L ++ N L+ LY +T +KI ++ M+ ++ P +TY + +
Sbjct: 247 KAEEVFNKMKDLEFPITAFACNQLLLLYKRT-DKKKIADVLLLMEKENVKPSPFTYKILI 305
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A NDISG E+V++ MK +G + T LA YV AGL +KA+ LKE E N+
Sbjct: 306 DAKGLSNDISGMEQVVDTMKAEG-IKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINS 364
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+FL+ LYG+ EV R+W + N + I LK++ AEK
Sbjct: 365 KGSRRPCRFLLPLYGELQMEDEVRRLW---EICESNPHVEECMAAIVAWGKLKNVQEAEK 421
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA--DP 230
F R + M+ Y L +EL + G DP
Sbjct: 422 IFDRVVKTGKKLSTRHYSTMMNVYRDSKMLTKGKELVNQMAESGCSMDP 470
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 144/326 (44%), Gaps = 19/326 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA+ALL +M + + + +N+++ Y K + ++ ++ EMK S+++P +YT +
Sbjct: 393 EKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMI 452
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I A RV E M G V + ++ L +V+ G F++A R LK ++ +
Sbjct: 453 INGLCRHGSIEDASRVFEIMVSLG-VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 123 AHRDLSAYQFLITLYGQTGNLSE-----VYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
D+ Y +I ++ + E V I R L+ PN +Y +I +
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLK---PNV--YTYGALIHGYCKSGE 566
Query: 178 LPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ A++ FKE G A D+ V +I Y KEG A + R P+ +T+
Sbjct: 567 MQVADRYFKEMLGCGIAPNDV-VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYS 625
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
LRNG ++ A++ L + ++ G VP T + + F ++ + A
Sbjct: 626 ALIHGLLRNGKLQGAMELLSEFLEKG------LVPDVFTYNSIISGFCKQGGIGKAFQLH 679
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAG 322
E + + + + LI AG
Sbjct: 680 EYMCQKGISPNIITYNALINGLCKAG 705
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 132/320 (41%), Gaps = 20/320 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ +LE+M L + + +L+ + + G + + +EM A + + +TYN +
Sbjct: 324 EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALV 383
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + D+ A+ ++ EM G + D T++N+ Y++ + + L E++ N
Sbjct: 384 KGVCKFGDMEKADALLNEMIMVG-IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNL 442
Query: 124 HRDLSAYQFLITLYGQTGNL---SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+I + G++ S V+ I SL + PN + Y +I+ V
Sbjct: 443 VPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVK-PNA--VIYTTLIKGHVQEGRFQE 499
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + K + D+ N +I K ++E A++ RG PN T+
Sbjct: 500 AVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIH 559
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y ++G+M++A ++ + G P+ + + +E A +
Sbjct: 560 GYCKSGEMQVADRYFKEMLGCG------IAPNDVVCTALIDGYCKEGSTTEATSIFRCM- 612
Query: 301 KAVDDLGVEVFEPLIRTYAA 320
LG V P +RTY+A
Sbjct: 613 -----LGRSV-HPDVRTYSA 626
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 26/299 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L + + L +++ + +++ Y K+G+ K + EM + PDS+ Y+
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + E + G A ++ + L + ++G +A + L+++ +++
Sbjct: 768 IDGCRKEGNTEKALSLFLESVQKG--FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKH 825
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN----TANISYLNMI---QVLV 173
D Y LI + +TG L E + + + R PN TA +S NM +
Sbjct: 826 VKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMF 885
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
L D E K+ E T+ +VMI A+ KEG +L + ++G + +
Sbjct: 886 ALFD----EMIAKDIEPDGVTW-----SVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKN 936
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+ D R + + LEK + G S T T +R F + +DGA
Sbjct: 937 VCHVLIDPLCRKEHVSEVLKVLEKIEEQGLN------LSLATCSTLVRCFHKAGKMDGA 989
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 99/261 (37%), Gaps = 37/261 (14%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
+L+ Y K G + +I + M S+ PD TY+ + L + GA ++ E
Sbjct: 591 ALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK 650
Query: 86 GRVAADWT----------------------------------TFSNLASIYVEAGLFEKA 111
G V +T T++ L + +AG E+A
Sbjct: 651 GLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERA 710
Query: 112 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 171
+ + + Y +I Y ++GNLS+ +R++ + L + Y +I
Sbjct: 711 RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770
Query: 172 LVNLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ A F E + G A+ N ++ + K G++ A +L E + P
Sbjct: 771 CRKEGNTEKALSLFLESVQKGFAS--TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKP 828
Query: 231 NAKTWEIFSDYYLRNGDMKLA 251
+ T+ I DY+ + G +K A
Sbjct: 829 DHVTYTILIDYHCKTGFLKEA 849
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 116/290 (40%), Gaps = 7/290 (2%)
Query: 12 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
M E N+ + L+ + + G+ ++ ++ EM+ P TYNV + L +
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
+ A + + M + G V AD T+S L + + +A+ L+E+ ++ AY
Sbjct: 287 VDEAFELKKLMDKKGLV-ADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345
Query: 132 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 191
LI + + G+ E +R+ + +Y +++ + D+ A+ E
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
D + N MI Y KE ++L ++ P A T + + R+G ++ A
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDA 465
Query: 252 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
E + G P++ T ++ QE A L+++ K
Sbjct: 466 SRVFEIMVSLGVK------PNAVIYTTLIKGHVQEGRFQEAVRILKVMDK 509
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 125/324 (38%), Gaps = 16/324 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L E M + + + + +N+L+ K G E+ + + + ++ TY +
Sbjct: 674 KAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATII 733
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++S A R+ +EM G V D +S L + G EKA E +
Sbjct: 734 DGYCKSGNLSKAFRLFDEMTLKG-VPPDSFVYSALIDGCRKEGNTEKALSLFLE-SVQKG 791
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
S+ L+ + ++G + E ++ + +++Y +I L AE+
Sbjct: 792 FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQ 851
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F + + + ++ Y GR L + + +P+ TW + D +L
Sbjct: 852 FFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHL 911
Query: 244 RNGD----MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ GD +KL D L+K GG S + +++ V LE +
Sbjct: 912 KEGDHVKTLKLVDDMLKK--------GGN--VSKNVCHVLIDPLCRKEHVSEVLKVLEKI 961
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGR 323
++ +L + L+R + AG+
Sbjct: 962 EEQGLNLSLATCSTLVRCFHKAGK 985
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 117/303 (38%), Gaps = 15/303 (4%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N L++ K E M ++++ D YTY + A + +R++ EM+
Sbjct: 205 NGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEE 264
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G + T++ + AG ++A K ++ + D+ Y LI +G+ +
Sbjct: 265 KG-CSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCT 323
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
E + + +++Y +I + D A + +E + ++ N ++
Sbjct: 324 EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALV 383
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
K G +E A+ L G P+ +T+ + YL+ + D L + +
Sbjct: 384 KGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKS--- 440
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAA 320
VP++ T + + ++ A EI+ LGV+ ++ LI+ +
Sbjct: 441 ---NLVPTAYTCGMIINGLCRHGSIEDASRVFEIMV----SLGVKPNAVIYTTLIKGHVQ 493
Query: 321 AGR 323
GR
Sbjct: 494 EGR 496
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/249 (17%), Positives = 101/249 (40%), Gaps = 1/249 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL +M+E S + +N ++ + G ++ + + M ++ D +TY++ +
Sbjct: 258 LLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFG 317
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ A+ ++EEM G + ++ L ++ G +A R +E+ R +L
Sbjct: 318 KQKRCTEAKLMLEEMFSKG-LKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNL 376
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+ + G++ + + + + +Y NMI+ + ++ + E
Sbjct: 377 FTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSE 436
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ ++I + G +E+A + E G PNA + +++ G
Sbjct: 437 MKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496
Query: 248 MKLAVDCLE 256
+ AV L+
Sbjct: 497 FQEAVRILK 505
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 8/251 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE + +++K+L L + N ++ LY + P K+ +++ M+ ++ P ++TY +
Sbjct: 262 QKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIA-PGKVASVLMLMEKENVKPSAFTYRLL 320
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
+ ND++G E V+ EMK G + +T + +A Y+ GL EKAE +KE+E +
Sbjct: 321 IDLKGRSNDLAGIEVVLNEMKAYG-IEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQL 379
Query: 122 -NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N+ + L+ LY ++V RIW +L+ I+ L +
Sbjct: 380 SNSKDGRHVIKSLLHLYAALNKPNDVARIWEMCTEPMLE----DFLSAIKAWGELGLIEK 435
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F+ + + N M+ YA+ L ++ ER R G TW+ +
Sbjct: 436 AEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALIN 495
Query: 241 YYLRNGDMKLA 251
Y+ +G+++ A
Sbjct: 496 LYVNSGEVEKA 506
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 11/291 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++++M E L + +N+L+ + G E + +EM I PD YTYN +
Sbjct: 506 EASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLL 565
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R L V + A ++ +E K G + ++ T+ + Y +A E E EL ++
Sbjct: 566 RGLCNVGKLDDAIKLWDEFKASGLI-SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKM 624
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y +I + Q GN++ ++ +++ PN A +Y ++I + N+ + A
Sbjct: 625 ELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCA--TYSSLIHGVCNIGLVEDA 682
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E ++ +IG Y K G+++ AE PN T+ + D
Sbjct: 683 KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 742
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
Y + G+M+ A + L K ++G VP T F + D+D A
Sbjct: 743 YCKLGNMEKANNLLIKMKESG------IVPDVVTYNVLTNGFCKANDMDNA 787
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 136/353 (38%), Gaps = 12/353 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K +L++M + + FN+L+ Y K G+ E I M + +I P S T
Sbjct: 330 DKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL 389
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ + I AE +EE+ G +S + + + A R K + +RN
Sbjct: 390 MQGFCKSDQIEHAENALEEILSSGLSIHPDNCYS-VVHWLCKKFRYHSAFRFTKMMLSRN 448
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L+ + G E +W L + ++ +I L LP A
Sbjct: 449 FRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEAS 508
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ KE D N +I + EG++E L+E +RG P+ T+
Sbjct: 509 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 568
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKK 301
G + A+ K D + G + + T M + + ++ E F E+L K
Sbjct: 569 CNVGKLDDAI----KLWDEFKASG--LISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 622
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEAS-KKLLEAIC 351
+ +L V+ +I+ + G + +L +K + + + A+ L+ +C
Sbjct: 623 KM-ELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVC 674
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ AE+ +M N+ + + ++ Y K G+ EK ++ +MK S I+PD TYNV
Sbjct: 715 DTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 774
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA 99
ND+ A +V ++M +G + D T++ L
Sbjct: 775 TNGFCKANDMDNAFKVCDQMATEG-LPVDEITYTTLV 810
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 19/202 (9%)
Query: 93 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
T F NL F A L + L FL++ + + ++R
Sbjct: 183 TQFRNLG--------FSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRV 234
Query: 153 L-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
+ A P+ S+ N+I L + A + F + E + ++ N +I + G
Sbjct: 235 MSEGACPDV--FSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNG 292
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA-VDCLEKAIDTGRGDGGKWV 270
RL+NA ELKE+ +G PN KT+ L NG +KL D + +D G G +
Sbjct: 293 RLDNAFELKEKMTVKGVQPNLKTYGA-----LINGLIKLNFFDKVNHVLDEMIGSG--FN 345
Query: 271 PSSETIRTFMRHFEQEKDVDGA 292
P+ + + + +++GA
Sbjct: 346 PNVVVFNNLIDGYCKMGNIEGA 367
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A+ L+++M++ + + + +L+ Y K G + + EM + +I P+ +TY
Sbjct: 678 LVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYT 737
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + + ++ A ++ +MK G + D T++ L + + +A + A + ++
Sbjct: 738 VMIDGYCKLGNMEKANNLLIKMKESG-IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMAT 796
Query: 121 RNAHRDLSAYQFLI 134
D Y L+
Sbjct: 797 EGLPVDEITYTTLV 810
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +++ K G E + +M+ I P+ TYN + L + A + E+M
Sbjct: 246 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 305
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T+ L + ++ F+K L E+ + ++ + LI Y + GN+
Sbjct: 306 VKG-VQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNI 364
Query: 144 SEVYRI 149
+I
Sbjct: 365 EGALKI 370
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 9/289 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL+KM E + +N+L++ K G E+ + EM I PD++TYN+
Sbjct: 575 QEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLL 634
Query: 63 MRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + + A + E K RD + + T+ + Y +A E+ E+ EL +
Sbjct: 635 IHGMCRIGKLDEAVNLWNECKSRD--LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 692
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N + Y LI Y + GN E +++ +R +Y ++I + N+ + A
Sbjct: 693 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E ++ +IG Y K G+++ + + PN T+ + D
Sbjct: 753 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 812
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
Y ++GDMK A L + + G VP + T F +E ++
Sbjct: 813 YSKSGDMKTAAKLLHEMVGKG------IVPDTVTYNVLTNGFCKEGKIE 855
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 138/324 (42%), Gaps = 13/324 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++L++ E + + +N+L+ Y K G+ I +M + I P+S T N +
Sbjct: 401 EANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSII 460
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + + AE ++EEM G + + F+ + FE A R L+E+ RN
Sbjct: 461 QGFCKIGQMEQAECILEEMLSRG-FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLN-MIQVLVNLKDLPGA 181
+ L+ + G S+ +W R L F AN+ N +I L ++ A
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF--GANLVTTNALIHGLCKTGNMQEA 577
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ K+ D N +I KEG++E +L+ ++G +P+ T+ +
Sbjct: 578 VRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG 637
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF-EQEKDVDGAEGFLEILK 300
R G + AV+ + VP+ T + + + +K +G + F E+L
Sbjct: 638 MCRIGKLDEAVNLWNEC------KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 691
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRT 324
+ + +L V+ LIR Y G T
Sbjct: 692 QNL-ELNSVVYNTLIRAYCRNGNT 714
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 2/221 (0%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ + + + P T + +L N++ + V E M++ V+ D FS +
Sbjct: 265 GVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG--VSPDVYLFSTAINA 322
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + G E A + ++E ++ Y LI + GNL E +R + N
Sbjct: 323 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 382
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
I+Y +I L+ L+ A KE T + V N +I Y K G L +A ++
Sbjct: 383 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+G +PN+ T + + G M+ A LE+ + G
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ E L ++ NL +S+ +N+L+ Y + G+ + + +M++ I P + TY+
Sbjct: 680 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 739
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + + A+ +I+EM+++G + + ++ L Y + G +K L+E+ + +
Sbjct: 740 IHGMCNIGRMEDAKCLIDEMRKEG-LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
H + Y +I Y ++G D+ A
Sbjct: 799 IHPNKITYTVMIDGYSKSG-----------------------------------DMKTAA 823
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
K E D NV+ + KEG++E + L E
Sbjct: 824 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE 862
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 36/274 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F++ + + K G E + +M+ + P+ TYN + L ++ A R E+M
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 375
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+DG V A T+S L + ++ F +A LKE + + Y LI Y + GNL
Sbjct: 376 KDG-VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 434
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-------GCATYD 196
+ RI + N +++ ++IQ + + AE +E S G T
Sbjct: 435 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 494
Query: 197 IR----------------------------VTNVMIGAYAKEGRLENAEELKERARRRGA 228
I + ++G KEG+ +A EL R +G
Sbjct: 495 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 554
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
N T + G+M+ AV L+K ++ G
Sbjct: 555 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 5/225 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ K G + I+ EM IMP+ TY+ + A + A + EMK
Sbjct: 215 YNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMK 274
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ D +++ L SIY + G FE+A KE+E+ +D Y L+ YG+ G
Sbjct: 275 F-ASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKY 333
Query: 144 SEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
EV R++ ++ FPN ++Y +I V A + F+E++ D+ + +
Sbjct: 334 EEVKRVFEEMKAERIFPNL--LTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 391
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+I A K G +E+A + + G PN T+ D + R+G
Sbjct: 392 ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 436
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L +MK ++G + +N+L+++YAK G E+ + +EM++S I D+ TYN
Sbjct: 264 DEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNAL 323
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +RV EEMK + R+ + T+S L +Y + GL+++A +E +
Sbjct: 324 LGGYGKQGKYEEVKRVFEEMKAE-RIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG 382
Query: 123 AHRDLSAYQFLITLYGQTG 141
D+ Y LI + G
Sbjct: 383 LKADVVLYSALIDALCKNG 401
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 6/203 (2%)
Query: 50 SSIMPDSYTYNVWMRALAAVN-DISGAERVIEEMKRDGR-----VAADWTTFSNLASIYV 103
S + P+ TYN + A D + A + +EM + D T++ L
Sbjct: 164 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVC 223
Query: 104 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 163
+ G + A + + E+ ++ ++ Y +I Y + G L E ++ ++ A +
Sbjct: 224 KGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRV 283
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
SY ++ + L A KE ES D N ++G Y K+G+ E + + E
Sbjct: 284 SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEM 343
Query: 224 RRRGADPNAKTWEIFSDYYLRNG 246
+ PN T+ D Y + G
Sbjct: 344 KAERIFPNLLTYSTLIDVYSKGG 366
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 19/337 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
+E + KMK+L+L + N L+ LY K +KI ++ M+ ++ P +TY + +
Sbjct: 253 SEKIFNKMKDLDLPLTVFACNQLLLLYKKLDK-KKIADVLLLMEKENVKPSLFTYRILID 311
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ NDI+G E+V E MK +G D + LA Y AGL EKAE LKE+E N
Sbjct: 312 SKGHSNDIAGMEQVFETMKEEG-FEPDIQLQALLARHYTSAGLKEKAEAILKEIEGENLE 370
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
L+ LY G EV RIW+ + P + L ++ L+ + AE
Sbjct: 371 EKQWVCATLLRLYANLGKADEVERIWKVCE-SKPRVDDC--LAAVEAWGKLEKIEEAEAV 427
Query: 185 F----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F K+W+ Y I ++ YA L ++L +R G TW
Sbjct: 428 FEMASKKWKLNSKNYSI-----LLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNALVK 482
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y++ G+++ A L+KAI + P T + + + DV +E ++
Sbjct: 483 LYIQAGEVEKADSVLQKAIQQ-----SQLQPMFTTYLDILEQYAKRGDVHNSEKIFLKMR 537
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+A + F+ L++ Y A + + R+K + +
Sbjct: 538 QAGYTSRISQFKVLMQAYVNAKVPAYGIRERMKADNL 574
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 90/208 (43%), Gaps = 6/208 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAEA+L++++ NL +L+ LYA G +++ I + ++ + D
Sbjct: 353 LKEKAEAILKEIEGENLEEKQWVCATLLRLYANLGKADEVERIWKVCESKPRVDDCLAA- 411
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + I AE V E + ++ + +S L IY + K + +K + +
Sbjct: 412 --VEAWGKLEKIEEAEAVFEMASKKWKLNS--KNYSILLKIYANNKMLAKGKDLIKRMAD 467
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ L+ LY Q G + + + ++++ + +YL++++ D+
Sbjct: 468 SGLRIGPLTWNALVKLYIQAGEVEKADSVLQKAIQQSQLQPMFTTYLDILEQYAKRGDVH 527
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAY 207
+EK F + T I V++ AY
Sbjct: 528 NSEKIFLKMRQAGYTSRISQFKVLMQAY 555
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 134/308 (43%), Gaps = 10/308 (3%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
+S+ FN+L+ ++K G P +++ M A I P+ +YN + L + AE ++
Sbjct: 9 NSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELV 68
Query: 80 EEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+M R GR D T+S L S Y +AG E++ LKE+ +R D Y ++
Sbjct: 69 RDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLC 128
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
++ L E + + A I++ +I K+L A+ ++ + D+
Sbjct: 129 KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVV 188
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
N ++ K GRL+ AE+L ER + G P+ + F ++G + A LE+
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM 248
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV--FEPLIR 316
D+ P+ T T + + +D A +E + + D G+ V + ++
Sbjct: 249 RDS------HHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS-DGCGLNVVGYSTVVD 301
Query: 317 TYAAAGRT 324
GRT
Sbjct: 302 GLCKLGRT 309
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 5/249 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE LLE+MK + ++S + K+G ++++M+ S P+ TYN
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTI 263
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I A ++E+M + +S + + G ++A ++ +
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y L+ + G + E R + + ++Y +++ L + L AE
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383
Query: 183 KCFKEWESGCATY-----DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ +E SG + N +IG K GR+++A + +R R +G DP+ ++
Sbjct: 384 RMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443
Query: 238 FSDYYLRNG 246
+ R+G
Sbjct: 444 IVEGLARSG 452
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 6/215 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+L++ + + E +++Q+M AS + D TYN M L + AE+++E MK
Sbjct: 155 FNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG--QTG 141
G A D +S+ ++G A + L+++ R++H D + + L G ++G
Sbjct: 215 ASG-CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQM--RDSHHDPNVVTYNTILDGLCKSG 271
Query: 142 NLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
+ + + + N + Y ++ L L A + D+
Sbjct: 272 KIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTY 331
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ ++ K G++E A E G PNA T+
Sbjct: 332 SSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 114/253 (45%), Gaps = 4/253 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E++ LL+++ L ++ + ++ K+ + +++EM + P T+N
Sbjct: 99 EESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTL 158
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A+ ++++M G V AD T++ L +AG ++AE+ L+ ++
Sbjct: 159 ISGCCREKNLEMADSLLQKMAASG-VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASG 217
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ AY + ++G + + +++ +R + + ++Y ++ L + A
Sbjct: 218 CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTAL 277
Query: 183 KCFKEWES--GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ ++ S GC + + V+ G K GR + A + E R G P+ T+ +
Sbjct: 278 EMMEQMASSDGCGLNVVGYSTVVDG-LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336
Query: 241 YYLRNGDMKLAVD 253
+ G ++ AV+
Sbjct: 337 GLCKAGKIEEAVE 349
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A +++E M + ++SL+ K G E+ ++EM P++ TY
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 62 WMRALAAVNDISGAERVIEEM----KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
+ L + ++ AER++EEM +T++ L +AG + A + +
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
+ ++ D +Y ++ ++G + I +R
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 10/311 (3%)
Query: 17 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 76
LG +N+L+ ++K G +K + +M+ IMP+ TY+ + L ++ AE
Sbjct: 220 LGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAE 279
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
RV+ +M G V + T++ L Y +G+++++ R KE+ + D+ +T
Sbjct: 280 RVLRQMVGAG-VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 338
Query: 137 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 196
+ G + E I+ S+ L P ISY ++ + G + F D
Sbjct: 339 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 398
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
V N +I AYA+ G ++ + + E ++G +P+ T+ + R G + A++
Sbjct: 399 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 458
Query: 257 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD--VDGAEGFLEILKKAVDDLGVEVFEPL 314
IDTG VP + + + + + V E ++L K + ++ F +
Sbjct: 459 HMIDTG-------VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSI 511
Query: 315 IRTYAAAGRTS 325
I GR +
Sbjct: 512 INNLCKEGRVA 522
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 120/297 (40%), Gaps = 39/297 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE +L +M + ++M +N L+ Y+ +G ++ + +EM +S ++PD N +
Sbjct: 276 DKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSF 335
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M AL I A + + M G V
Sbjct: 336 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV 395
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
D F+ L + Y G+ +K+ +++ + + D+ + +I+ + + G L +
Sbjct: 396 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 455
Query: 149 IWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIG 205
+ + P+TA Y +IQ N +DL A++ + S G I+ +I
Sbjct: 456 KFNHMIDTGVPPDTA--VYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIIN 513
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEGR+ +++ + G PN T+ D Y G+MK AV L+ G
Sbjct: 514 NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 570
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 98/244 (40%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL+ M+ + + +N+L+ Y K G + + ++M + S +YN+
Sbjct: 557 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 616
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ + EM G +A T++ + ++A L++L + N
Sbjct: 617 LHGLFQARRTIVAKEMFHEMIESG-MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMN 675
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + +I + G E ++ ++ ++Y MI L+ + A+
Sbjct: 676 VKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDAD 735
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F E T D R+ N +I +G + A + ++G P A T + +
Sbjct: 736 NLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 795
Query: 243 LRNG 246
NG
Sbjct: 796 SVNG 799
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 8/157 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A LLEK+ +N+ F + FN ++ K G ++ + + ++P TY V
Sbjct: 661 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRV 720
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A+ + M++ D + + + + G KA L +++ +
Sbjct: 721 MITNLIKEESFEDADNLFSSMEKSS-CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 779
Query: 122 NAHRDLSAYQFLITLYGQTGN-------LSEVYRIWR 151
+ + LI L+ G L E YR R
Sbjct: 780 GILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 816
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 6/258 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE + ++++L+L + N ++ LY + K+ II M+ +I P +TY +
Sbjct: 226 QKAEEVFREIRDLSLPLTVSACNQMILLYKRVAR-TKVADIIMLMEKENIKPSPFTYKLI 284
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ NDISG E + EMK G V D+ T + +A Y+ GL EKA+ + E+E
Sbjct: 285 IDLKGRSNDISGVEVTLNEMKAAG-VEPDFVTQTMVAKFYISGGLIEKAKAVVSEIEMEY 343
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
A + L+ LY EV RIW+ P + ++ I+ L + AE
Sbjct: 344 MKDKRHAVRSLLHLYAALSKPDEVARIWK--LCTEPKLDD--FMAAIEAWGKLGCIEQAE 399
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+ + N M+ YA+ ++ ++ ER G TW+ Y
Sbjct: 400 ETFEAMLEATQKLSSKYYNGMLNVYAENKLMDKGKKFVERMSFDGCPNGPLTWDALVKLY 459
Query: 243 LRNGDMKLAVDCLEKAID 260
+ +G++ A L+ A +
Sbjct: 460 VNSGEVAKADSFLQNATE 477
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 36/261 (13%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++ + ++++ + P NSL+ + K G E++ + ++MK + I P YTYN
Sbjct: 168 VDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M L + + AERV E M+ GR+ D T++ + Y +AG +KA L+ +E +
Sbjct: 228 LMNGLVSAMFVDSAERVFEVME-SGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETK 286
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D I+Y+ MIQ D
Sbjct: 287 GLEAD-----------------------------------KITYMTMIQACYADSDFSSC 311
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++E + +++IG KEG+L + E R+G+ PN + + D
Sbjct: 312 VALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 371
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y + G ++ A+ L + ID G
Sbjct: 372 YAKTGSVEDAIRLLHRMIDEG 392
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 108/274 (39%), Gaps = 37/274 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ AE + E M+ + + +N+++ Y K G +K ++ M+ + D TY
Sbjct: 237 FVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYM 296
Query: 61 VWMRALAAVNDISGAERVIEEMK-------------------RDGRVAADWTTFSN---- 97
++A A +D S + +EM ++G++ + F N
Sbjct: 297 TMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRK 356
Query: 98 -----------LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
L Y + G E A R L + + + D+ Y ++ + G + E
Sbjct: 357 GSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEA 416
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIG 205
+++ R ++ Y ++I L + AE+ F+E E GC T D N +I
Sbjct: 417 MDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC-TRDSYCYNALID 475
Query: 206 AYAKEGRLENAEELKERA-RRRGADPNAKTWEIF 238
A+ K G+++ A L +R G D T+ I
Sbjct: 476 AFTKHGKVDEALALFKRMEEEEGCDQTVYTYTIL 509
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 98/253 (38%), Gaps = 36/253 (14%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+ + KMKE + + +N LM + + + M++ I PD TYN
Sbjct: 202 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYN 261
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ A + M+ G A T + + + Y ++ F +E++
Sbjct: 262 TMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSD-FSSCVALYQEMDE 320
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ A+ +I + G L+E Y ++ NMI+ G
Sbjct: 321 KGLQVPPHAFSLVIGGLCKEGKLNEGYAVFE---------------NMIR--------KG 357
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ ++ + V+I YAK G +E+A L R G +P+ T+ + +
Sbjct: 358 SKP------------NVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVN 405
Query: 241 YYLRNGDMKLAVD 253
+NG ++ A+D
Sbjct: 406 GLCKNGRVEEAMD 418
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 10/311 (3%)
Query: 17 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 76
LG +N+L+ ++K G +K + +M+ IMP+ TY+ + L ++ AE
Sbjct: 149 LGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAE 208
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
RV+ +M G V + T++ L Y +G+++++ R KE+ + D+ +T
Sbjct: 209 RVLRQMVGAG-VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 267
Query: 137 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 196
+ G + E I+ S+ L P ISY ++ + G + F D
Sbjct: 268 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 327
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
V N +I AYA+ G ++ + + E ++G +P+ T+ + R G + A++
Sbjct: 328 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 387
Query: 257 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD--VDGAEGFLEILKKAVDDLGVEVFEPL 314
IDTG VP + + + + + V E ++L K + ++ F +
Sbjct: 388 HMIDTG-------VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSI 440
Query: 315 IRTYAAAGRTS 325
I GR +
Sbjct: 441 INNLCKEGRVA 451
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 120/297 (40%), Gaps = 39/297 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE +L +M + ++M +N L+ Y+ +G ++ + +EM +S ++PD N +
Sbjct: 205 DKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSF 264
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M AL I A + + M G V
Sbjct: 265 MTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGV 324
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
D F+ L + Y G+ +K+ +++ + + D+ + +I+ + + G L +
Sbjct: 325 VPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAME 384
Query: 149 IWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIG 205
+ + P+TA Y +IQ N +DL A++ + S G I+ +I
Sbjct: 385 KFNHMIDTGVPPDTA--VYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIIN 442
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEGR+ +++ + G PN T+ D Y G+MK AV L+ G
Sbjct: 443 NLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVG 499
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 98/244 (40%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL+ M+ + + +N+L+ Y K G + + ++M + S +YN+
Sbjct: 486 KEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNII 545
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ + EM G +A T++ + ++A L++L + N
Sbjct: 546 LHGLFQARRTIVAKEMFHEMIESG-MAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMN 604
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + +I + G E ++ ++ ++Y MI L+ + A+
Sbjct: 605 VKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDAD 664
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F E T D R+ N +I +G + A + ++G P A T + +
Sbjct: 665 NLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 724
Query: 243 LRNG 246
NG
Sbjct: 725 SVNG 728
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 8/157 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A LLEK+ +N+ F + FN ++ K G ++ + + ++P TY V
Sbjct: 590 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRV 649
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A+ + M++ D + + + + G KA L +++ +
Sbjct: 650 MITNLIKEESFEDADNLFSSMEKSS-CTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKK 708
Query: 122 NAHRDLSAYQFLITLYGQTGN-------LSEVYRIWR 151
+ + LI L+ G L E YR R
Sbjct: 709 GILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 745
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 156/337 (46%), Gaps = 26/337 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+AEA+ E++KE L + +N+L+ Y KTG + +I+ EM+ S PD +TY++
Sbjct: 378 TEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSL 437
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A A V++EM+ G V + FS + + Y + G ++K+ + L+E+ N
Sbjct: 438 LIDAYANAGRWESARIVLKEMEASG-VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNS 496
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y +I +G+ L + +R+ +++ +I A
Sbjct: 497 GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 556
Query: 182 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E+ F+ ESGC+ N+MI ++ ++ R E+ + L + + +G N T+
Sbjct: 557 EELFEAMQESGCSPCTT-TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL-- 613
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
G + A++ A R DG K PS + + + F +++ A L+ +K
Sbjct: 614 -----GLSEQAIN----AFRVMRADGLK--PSVLVLNSLINAFGEDRRDAEAFSVLQYMK 662
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ +DL +P + TY + ++R K +KV
Sbjct: 663 E--NDL-----KPDVVTYTTLMK---ALIRVEKFDKV 689
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 1/212 (0%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
+++T G E+ AI +E+K +MP + YN ++ + AE ++ EM+R
Sbjct: 367 AVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERS 426
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G + D T+S L Y AG +E A LKE+E + + ++ Y G +
Sbjct: 427 G-FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQK 485
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+++ R +R + + Y MI L A F D N +I
Sbjct: 486 SFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLID 545
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ K G AEEL E + G P T+ I
Sbjct: 546 CHCKSGHHNKAEELFEAMQESGCSPCTTTYNI 577
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 27/292 (9%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +L+ ++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 208 AYSLVTWLERHNLCFSYELLYSI--LIHALGRSEKLYEAFLLSQRQTLTP--LTYNALIG 263
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA--ERALKELENRN 122
A A +D+ A ++ M+RDG +D+ +S + + + ++ E+E+
Sbjct: 264 ACARNDDLEKALNLMSRMRRDG-YPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDK 322
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---LAFPNTANISYLNMIQVLVNLKDLP 179
D +I + ++G+++ ++ L+ P TA + + +I L N
Sbjct: 323 IELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLS-PKTATL--VAVITALGNAGRTE 379
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE F+E + G R N ++ Y K G L++AE + R G P+ T+ +
Sbjct: 380 EAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLI 439
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG--------------RGDGGKWVPSSETIR 277
D Y G + A L++ +G D GKW S + +R
Sbjct: 440 DAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLR 491
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 107/286 (37%), Gaps = 53/286 (18%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
I E+++ I D N + A D++ A + ++ +G ++ T + +
Sbjct: 314 IYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNG-LSPKTATLVAVITAL 372
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI------------- 149
AG E+AE +EL+ AY L+ Y +TG+L + I
Sbjct: 373 GNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDE 432
Query: 150 ---------------WRSLRLAF---------PNTANISYLNMIQVLVNLKDLPGAEKCF 185
W S R+ PN+ S ++L + +D +K F
Sbjct: 433 HTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFS-----RILASYRDRGKWQKSF 487
Query: 186 ---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+E + + D NVMI + K L++A +R R G P+A TW D +
Sbjct: 488 QVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCH 547
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF-EQEK 287
++G A + E ++G P + T + F EQE+
Sbjct: 548 CKSGHHNKAEELFEAMQESG------CSPCTTTYNIMINSFGEQER 587
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL +++ + + +N+L++ ++ + E+ A+ +M++ PD +TYN +
Sbjct: 305 ALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMIS 364
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
AE + +E++ G D T+++L + G EK +E+ R
Sbjct: 365 VYGRCARARKAEELFKELESKG-FFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFG 423
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+D Y +I +YG+ G + +I+R ++ + N ++Y +I L + A
Sbjct: 424 QDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANV 483
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E + + +I AYAK G+ E AEE RR G P+ + + D++LR
Sbjct: 484 MSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLR 543
Query: 245 NGDMKLAVDCLEKAIDTG 262
+MK A+ + I G
Sbjct: 544 FNEMKKAMGLYHEMIREG 561
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 122/312 (39%), Gaps = 44/312 (14%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM--RALAAVND 71
E ++G + +N++M +YA+ G K+ ++ M+ +PD ++N + R + +
Sbjct: 242 ESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAME 301
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
+ A +++ E++R G + D T++ L S E+A ++E+ DL Y
Sbjct: 302 PNLALQLLNEVRRSG-IRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYN 360
Query: 132 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 191
+I++YG+ + AE+ FKE ES
Sbjct: 361 AMISVYGRCARARK-----------------------------------AEELFKELESK 385
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
D N ++ A+++EG E ++ E +RG + T+ Y + G A
Sbjct: 386 GFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQA 445
Query: 252 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
+ +GR P + T + + V+ A + + A + +
Sbjct: 446 MQIYRDMKSSGRN------PDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTY 499
Query: 312 EPLIRTYAAAGR 323
LI YA AG+
Sbjct: 500 SALICAYAKAGK 511
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEK + E+M + G M +N+++ +Y K G ++ I ++MK+S PD+ TY V
Sbjct: 407 TEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTV 466
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L + + A V+ EM D V T+S L Y +AG E+AE +
Sbjct: 467 LIDSLGKASKVEEAANVMSEM-LDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRS 525
Query: 122 NAHRDLSAYQFLITLY 137
D AY ++ +
Sbjct: 526 GIKPDRLAYSVMLDFF 541
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 106/259 (40%), Gaps = 5/259 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE L ++++ ++ +NSL+ +++ G+ EK+ I +EM D TYN +
Sbjct: 374 KAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTII 433
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A ++ +MK GR D T++ L +A E+A + E+ +
Sbjct: 434 HMYGKQGRHDQAMQIYRDMKSSGR-NPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGV 492
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
L Y LI Y + G E + +R + ++Y M+ + ++ A
Sbjct: 493 KPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMG 552
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ E T D + VM+ A + EN ++ +R R + + ++ S +
Sbjct: 553 LYHEMIREGFTPDNGLYEVMMHALVR----ENMWDVVDRIIRDMEELSGMNPQVISSVLV 608
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+ G A L+ AI G
Sbjct: 609 KGGCYDHAAKMLKVAISNG 627
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 105/256 (41%), Gaps = 1/256 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
++++++++ L S + +A+ G+ ++ I MKA+ P + Y + +R L
Sbjct: 865 VVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLL 924
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ E ++ EM+ G D +++ +Y+ F+ +++++ + D
Sbjct: 925 CKCKRVRDVETMLCEMEEAG-FQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPD 983
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
Y LI +Y + E + + +R +Y ++I + AE+ F+
Sbjct: 984 EETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFE 1043
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E S D ++M+ Y G AE L + G +P T + Y ++G
Sbjct: 1044 ELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSG 1103
Query: 247 DMKLAVDCLEKAIDTG 262
+ A + L+ TG
Sbjct: 1104 QPEEAENVLKNLRTTG 1119
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ +K+++ +L +N+L+ +Y + PE+ +++ +M++ + P TY + A
Sbjct: 971 IYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFN 1030
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AE + EE++ +G D + + Y +G KAE L ++ +
Sbjct: 1031 KQRMYEQAEELFEELRSNG-YKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTI 1089
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL-PGAEKCFK 186
S L+ YG++G E + ++LR + Y ++I + D G EK +
Sbjct: 1090 STMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTE 1149
Query: 187 EWESGCATYDIRVTNVMIGA 206
E+G D R+ I A
Sbjct: 1150 MKEAGIEP-DHRIWTCFIRA 1168
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 141/351 (40%), Gaps = 52/351 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE+L+ +++ +N+L+ YA +G E+ AI M P + N
Sbjct: 791 QKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTVDSVNGL 850
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++AL ++ VI+E++ + GL
Sbjct: 851 LQALIVDRRLNELYVVIQELQ--------------------DMGL--------------- 875
Query: 123 AHRDLSAYQFLITL--YGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDL 178
+S L+TL + Q GNL EV +I+ ++ A FP T ++ Y M+++L K +
Sbjct: 876 ---KISKSSILLTLEAFAQAGNLFEVQKIYNGMKAAGYFP-TMHV-YRIMLRLLCKCKRV 930
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
E E E D+++ N ++ Y ++ + ++ + P+ +T+
Sbjct: 931 RDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTL 990
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
Y R+ + + K G P +T R+ + F +++ + AE E
Sbjct: 991 IIMYCRDRRPEEGFSLMNKMRSLG------LEPKLDTYRSLITAFNKQRMYEQAEELFEE 1044
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAG--RTSPVMLRRLKMEKVEVSEASKKLL 347
L+ L + +++TY +G R + +L +K +E + ++ LL
Sbjct: 1045 LRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLL 1095
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL MKE + + + LM Y K+G PE+ +++ ++ + ++ D+ Y+ +
Sbjct: 1072 KAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVI 1131
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 101
A D + EMK G + D WT F A++
Sbjct: 1132 DAYLKKGDFKAGIEKLTEMKEAG-IEPDHRIWTCFIRAATL 1171
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF---PNTANISYLNMIQVLVN 174
LE R + + F++ GQ N ++ L L PN ++ ++ VL
Sbjct: 171 LEERRVQMTPTDFCFVVKWVGQQ-NWQRALELYECLNLRHWYAPNARMVA--TILGVLGK 227
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
A + F ES ++V N M+G YA+ GR +EL + R RG P+ +
Sbjct: 228 ANQEALAVEIFARAESSVGD-TVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVS 286
Query: 235 WEIFSDYYLRNGDMK--LAVDCLEKAIDTG 262
+ + +++G M+ LA+ L + +G
Sbjct: 287 FNTLINARMKSGAMEPNLALQLLNEVRRSG 316
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A ++ +M + + + +++L+ YAK G E+ M+ S I PD Y+V
Sbjct: 477 VEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSV 536
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ N++ A + EM R+G D + + V +++ +R ++++E
Sbjct: 537 MLDFFLRFNEMKKAMGLYHEMIREG-FTPDNGLYEVMMHALVRENMWDVVDRIIRDME 593
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL+++ + L + +N+L++ ++ + ++ + M+++ PD +TYN +
Sbjct: 323 LLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYG 382
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AE + E++K +G + D T+++L + + G EK +E+ +D
Sbjct: 383 RCGFALKAEHLFEKLKSNG-FSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDE 441
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +YG+ G E R++R ++ + N ++Y +I +L + A K E
Sbjct: 442 MTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSE 501
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + +I AYAK GR AEE R R G + + + D++LR +
Sbjct: 502 MLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNE 561
Query: 248 MKLAVDCLEKAIDTG 262
+K A ++ I+ G
Sbjct: 562 IKKAAALYQEMIEAG 576
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 1/225 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE L EK+K ++ +NSL+ ++K G+ EK+ I +EM D TYN +
Sbjct: 389 KAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTII 448
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A R+ +MK GR D T++ L + +A E+A + + E+ +
Sbjct: 449 HMYGKHGRHDEALRLYRDMKSSGR-NPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGV 507
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
L Y LI Y + G E + +R + +++Y M+ + ++ A
Sbjct: 508 KPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAA 567
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
++E T D + VM+ A +E + E + + + G+
Sbjct: 568 LYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELGS 612
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 1/206 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+T+Y + PE+ +++ +MK+ + P TY + A + AE + EE++
Sbjct: 1002 YNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELR 1061
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D + + + +Y +G +KAE L+ ++ + + L+ YG++G
Sbjct: 1062 SNG-YKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQP 1120
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E RI ++LR + Y ++I + D + E + D R+
Sbjct: 1121 EEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCF 1180
Query: 204 IGAYAKEGRLENAEELKERARRRGAD 229
I A + G + +A L + G D
Sbjct: 1181 IRAASLSGEVNDANNLLNALQAVGFD 1206
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEK + E+M ++ G M +N+++ +Y K G ++ + ++MK+S PD+ TY V
Sbjct: 422 TEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTV 481
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + I A +V+ EM D V T+S L Y + G +AE +
Sbjct: 482 LIDLLGKASKIEEASKVMSEM-LDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRES 540
Query: 122 NAHRDLSAYQFLITLY 137
D AY ++ +
Sbjct: 541 GIKADHLAYSVMLDFF 556
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 15/239 (6%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+L +M E FNS++ LY+ + + I Q ++ + + PD TYN +
Sbjct: 950 VMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMY 1009
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ ++ +MK G + T+ ++ + + + L+++AE +EL + D
Sbjct: 1010 CRDHRPEEGLSLMHKMKSLG-LEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLD 1068
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNTANISYLNMIQVLVNLKDLP-GAEK 183
S Y ++ +Y +G+ + + ++ A PNTA ++++ V P A++
Sbjct: 1069 RSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTAT---MHLLMVSYGKSGQPEEADR 1125
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGR----LENAEELKERARRRGADPNAKTWEIF 238
K + A D + +I AY K+G +E E+KE A +P+ + W F
Sbjct: 1126 ILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAA----IEPDHRIWTCF 1180
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 67/378 (17%), Positives = 139/378 (36%), Gaps = 56/378 (14%)
Query: 19 FSSMPFN----------SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW--MRAL 66
FS M FN S++++Y + G PE ++ + + I+ D+ T ++ +
Sbjct: 740 FSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHIIDIIETY 799
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ AE ++E +++ D ++ L Y +G +E+A +
Sbjct: 800 GKLKMWQSAESIVENLRQRCS-KMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPT 858
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLR---------------LAFPNTANIS------- 164
+ + L+ G LSE+Y + + L+ AF N+
Sbjct: 859 VESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYN 918
Query: 165 -------------YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
Y MI +L K + E D+++ N ++ Y+
Sbjct: 919 GMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIE 978
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 271
+N + + + G P+ +T+ Y R+ + + + K G P
Sbjct: 979 EFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLG------LEP 1032
Query: 272 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG--RTSPVML 329
+T R+ + F +++ D AE E L+ L + +++ Y +G + + +L
Sbjct: 1033 KRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLL 1092
Query: 330 RRLKMEKVEVSEASKKLL 347
+K +E + A+ LL
Sbjct: 1093 EIMKEAGIEPNTATMHLL 1110
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE LLE MKE + ++ + LM Y K+G PE+ I++ ++ + D+ Y+
Sbjct: 1086 QKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSV 1145
Query: 63 MRALAAVNDISGAERVIEEMKR-----DGRVAADWTTFSNLASI 101
+ A D + EMK D R+ WT F AS+
Sbjct: 1146 IDAYLKKGDAKAGIEKLTEMKEAAIEPDHRI---WTCFIRAASL 1186
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 16/191 (8%)
Query: 83 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI-------- 134
K + +A ++ + +Y G FEK + R D+ ++ LI
Sbjct: 255 KAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCA 314
Query: 135 TLYGQTGNL-SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 193
T+ G L EV + LR P+ I+Y +I +L A F ES
Sbjct: 315 TVSGLAIELLDEVGKF--GLR---PDI--ITYNTLISACSRESNLKEAIGVFSHMESNRC 367
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
D+ N MI Y + G AE L E+ + G P+A T+ + + G+ + D
Sbjct: 368 QPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRD 427
Query: 254 CLEKAIDTGRG 264
E+ + G G
Sbjct: 428 ISEEMVKMGFG 438
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 46/84 (54%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A+ +L+ ++ + ++P++S++ Y K G + + EMK ++I PD + +
Sbjct: 1121 EEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCF 1180
Query: 63 MRALAAVNDISGAERVIEEMKRDG 86
+RA + +++ A ++ ++ G
Sbjct: 1181 IRAASLSGEVNDANNLLNALQAVG 1204
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 36/238 (15%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+L+ + K G E++ + ++MK + I P YTYN M L + + AERV E M+
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME- 249
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
GR+ D T++ + Y +AG +KA L+++E R D
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD------------------ 291
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
I+Y+ MIQ D ++E + +++I
Sbjct: 292 -----------------KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
G KEG+L + E R+G+ PN + + D Y ++G ++ A+ L + ID G
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 106/274 (38%), Gaps = 37/274 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ AE + E M+ + + +N+++ Y K G +K +++M+ D TY
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 61 VWMRALAAVNDISGAERVIEEMK-------------------RDGRVAADWTTFSN---- 97
++A A +D + +EM ++G++ +T F N
Sbjct: 297 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 356
Query: 98 -----------LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
L Y ++G E A R L + + D+ Y ++ + G + E
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIG 205
+ + R ++ Y ++I L + AE+ F+E E GC T D N +I
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC-TRDSYCYNALID 475
Query: 206 AYAKEGRLENAEELKERA-RRRGADPNAKTWEIF 238
A+ K +++ A L +R G D T+ I
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 40/266 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+ + KMKE + + +N LM + + + M++ I PD TYN
Sbjct: 202 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 261
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ A + +M+ G A T + + + Y ++ F +E++
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD-FGSCVALYQEMDE 320
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ A+ +I + G L+E Y ++ NMI+ G
Sbjct: 321 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE---------------NMIR--------KG 357
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ ++ + V+I YAK G +E+A L R G P+ T+ + +
Sbjct: 358 SKP------------NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDG 266
+NG ++ A+D T R DG
Sbjct: 406 GLCKNGRVEEALD----YFHTCRFDG 427
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 40/335 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A LL +M+E+ F +L+ A+ G A++ E+K S + PD YNV
Sbjct: 62 ERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVC 121
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A + E+K G + D +++++ + +AG +AE ++E
Sbjct: 122 IDCFGKAGNVDMACKFFHELKAQG-LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 180
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ AY +I YG G + Y++ LR + +S+ +++ L + + A
Sbjct: 181 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 240
Query: 183 KCF----KEWESGCATYDIRV------------------------------TNVMIGAYA 208
F K+ E +TY+I + N+M+
Sbjct: 241 SLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 300
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K +LE A ++ E A +RG +P+ T+ D + G + A EK +D G
Sbjct: 301 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH--NAN 358
Query: 269 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
V + IR F H +E DG + F E++++
Sbjct: 359 PVVYTSLIRNFFIHGRKE---DGHKVFKELIRRGC 390
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 110/257 (42%), Gaps = 5/257 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
++A L EKM L+ G ++ P + SL+ + G E + +E+ PD
Sbjct: 340 VDEAYRLFEKM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLL 397
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N +M + ++ + E+++ G + D ++S L +AG + ++
Sbjct: 398 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLP-DVRSYSILIHGLTKAGQARETSNIFHAMK 456
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ D AY ++ + ++G + + Y I ++ +Y ++ L + L
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 516
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F+E +S ++ + + +I + K GR++ A + E ++G PN TW
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576
Query: 240 DYYLRNGDMKLAVDCLE 256
D ++ ++ A+ C +
Sbjct: 577 DALVKAEEINEALVCFQ 593
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 1/189 (0%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 106
M+ P Y V + ALA A ++ +M+ G F+ L G
Sbjct: 36 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG-YEVGVHLFTTLVRALAREG 94
Query: 107 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 166
A + E++ D+ Y I +G+ GN+ + + L+ ++SY
Sbjct: 95 QVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYT 154
Query: 167 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 226
+MI VL L AE+ F + E+ + N MI Y GR E+A +L ER R R
Sbjct: 155 SMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 214
Query: 227 GADPNAKTW 235
G P+ ++
Sbjct: 215 GCIPSVVSF 223
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E+ K + + + ++SL+ + K G ++ I++EM + P+ YT+N
Sbjct: 516 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 575
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL +I+ A + MK + + + T+S L + + KA ++++ +
Sbjct: 576 LDALVKAEEINEALVCFQSMK-EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 634
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYL 166
++ Y +I+ + GN+++ Y ++ + P+ A+ + L
Sbjct: 635 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNAL 680
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 36/238 (15%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+L+ + K G E++ + ++MK + I P YTYN M L + + AERV E M+
Sbjct: 173 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME- 231
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
GR+ D T++ + Y +AG +KA L+++E R D
Sbjct: 232 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD------------------ 273
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
I+Y+ MIQ D ++E + +++I
Sbjct: 274 -----------------KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 316
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
G KEG+L + E R+G+ PN + + D Y ++G ++ A+ L + ID G
Sbjct: 317 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 374
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 106/274 (38%), Gaps = 37/274 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ AE + E M+ + + +N+++ Y K G +K +++M+ D TY
Sbjct: 219 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 278
Query: 61 VWMRALAAVNDISGAERVIEEMK-------------------RDGRVAADWTTFSN---- 97
++A A +D + +EM ++G++ +T F N
Sbjct: 279 TMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK 338
Query: 98 -----------LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
L Y ++G E A R L + + D+ Y ++ + G + E
Sbjct: 339 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 398
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIG 205
+ + R ++ Y ++I L + AE+ F+E E GC T D N +I
Sbjct: 399 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC-TRDSYCYNALID 457
Query: 206 AYAKEGRLENAEELKERA-RRRGADPNAKTWEIF 238
A+ K +++ A L +R G D T+ I
Sbjct: 458 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 491
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 40/266 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+ + KMKE + + +N LM + + + M++ I PD TYN
Sbjct: 184 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 243
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ A + +M+ G A T + + + Y ++ F +E++
Sbjct: 244 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD-FGSCVALYQEMDE 302
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ A+ +I + G L+E Y ++ NMI+ G
Sbjct: 303 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE---------------NMIR--------KG 339
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ ++ + V+I YAK G +E+A L R G P+ T+ + +
Sbjct: 340 SKP------------NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 387
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDG 266
+NG ++ A+D T R DG
Sbjct: 388 GLCKNGRVEEALD----YFHTCRFDG 409
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 3/257 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A + + M E L + +N LM + K G + + EMK P TYN+
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + + A ++ +M DG + D T+S L + ++G E+A + +E+ +R
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDG-CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR 269
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
DL Y L+ + GN+ V+++ + + + S+ ++ L A
Sbjct: 270 GVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAA 329
Query: 182 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F ESGC D+ N++I +YA+ G A ++ E G P KT+
Sbjct: 330 REVFARMVESGCKP-DLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIH 388
Query: 241 YYLRNGDMKLAVDCLEK 257
+ +G + A LE+
Sbjct: 389 WLATDGQVDEAFAVLEE 405
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 126/335 (37%), Gaps = 42/335 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY--- 59
E+AE + +K+ + +N L+ + ++G + + +EMK PD YTY
Sbjct: 82 ERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFL 141
Query: 60 --------------------------------NVWMRALAAVNDISGAERVIEEMKRDGR 87
N+ M A V + A + EMKR G
Sbjct: 142 VNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG- 200
Query: 88 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
T++ L AG A + ++ D Y L+ G++G + E +
Sbjct: 201 FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAH 260
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
+++R + ++Y +++ L ++ K KE D N ++ A
Sbjct: 261 KVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDAL 320
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
K + + A E+ R G P+ ++ I D Y R GD A LE+ ++ G
Sbjct: 321 GKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG----- 375
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
++P ++T + + + VD A LE ++ A
Sbjct: 376 -FIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 14/237 (5%)
Query: 95 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
F+ L I V +G FE+AE K+L + D AY LI +G++G L ++R ++
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK 127
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 214
+ +Y ++ L + A F T +I N+++ A+ K G+L+
Sbjct: 128 IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLD 187
Query: 215 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 274
A L +RRG P+ T+ I D G + A K GDG P S
Sbjct: 188 MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT----GDG--CSPDSY 241
Query: 275 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV----FEPLIRTYAAAGRTSPV 327
T T + + V+ A ++ ++ VD GV V + L+ T A AG V
Sbjct: 242 TYSTLVNGLGKSGRVEEAH---KVFREMVDR-GVAVDLVNYNSLLATLAKAGNMDRV 294
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 101/249 (40%), Gaps = 1/249 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A + +M + + + +NSL+ AK G+ +++ +++EM PD++++N
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNT 315
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M AL N A V M G D +++ L Y G +A + L+E+
Sbjct: 316 IMDALGKANKPDAAREVFARMVESG-CKPDLISYNILIDSYARFGDAAQARQMLEEMVEA 374
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y LI G + E + + + A ++Y ++ +L + A
Sbjct: 375 GFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRA 434
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F++ + D V I A + RL+ A L + + G + + I
Sbjct: 435 ARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRA 494
Query: 242 YLRNGDMKL 250
R GD +L
Sbjct: 495 AHRAGDTEL 503
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 1/217 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L+++M + FN++M K P+ + M S PD +YN+ + + A
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
D + A +++EEM G + + T+++L G ++A L+E+E D+
Sbjct: 357 RFGDAAQARQMLEEMVEAGFIP-ETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDV 415
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+ + G+ G R+++ ++ +SY I L L A FK+
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKD 475
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
++ D + ++I A + G E +LK ++
Sbjct: 476 MKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQ 512
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 1/204 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F L+ + +G E+ + +++ D + YNV +R + A + EMK
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK 127
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G D T+ L + +AG ++A + R ++ Y L+ + + G L
Sbjct: 128 IKGS-EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ ++ + ++Y ++ L + + A K F + + D + +
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246
Query: 204 IGAYAKEGRLENAEELKERARRRG 227
+ K GR+E A ++ RG
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRG 270
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 95/222 (42%), Gaps = 10/222 (4%)
Query: 106 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-S 164
G+ + E LKE+ + LIT YG+ + + ++ +F + + +
Sbjct: 9 GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAE-SFACSPTVHA 67
Query: 165 YLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
+ +I +LVN + AE +K+ + GC D NV+I + + G+L++A E+
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQKGC-QLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
+ +G++P+ T+ + + G ++ A + ++ G P+ T M F
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG------LTPNIPTYNLLMDAF 180
Query: 284 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
+ +D A G +K+ V + L+ +AGR
Sbjct: 181 RKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVG 222
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 46/167 (27%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+K+ + L+KMKE+ S + +N +M LY G EK+P ++ EMK S++ PD+++Y +
Sbjct: 156 TDKSLSHLQKMKEMGFASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRI 215
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A +DI G E V++EM+R +
Sbjct: 216 CINSYGAQSDIQGMENVLKEMERQPHI--------------------------------- 242
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWR----------SLRLAFP 158
RD Y LI+LY GN +EV R+W SLR+ P
Sbjct: 243 ---RDGLGYNHLISLYASLGNKAEVLRLWSLEKNVEAFVGSLRIVIP 286
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 16/290 (5%)
Query: 6 EALL--EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
EALL +M++LN+ F+ + +N L+ Y + G E+ ++ EM+ I P+ TYN +
Sbjct: 192 EALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALI 251
Query: 64 RALAAVN---DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
AE +IEEM+ G + D TF+ L Y GL E+AE+ ++
Sbjct: 252 TGYLEAKPKRQFVVAEGLIEEMEASG-LYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKA 310
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R + +Y LI Y + + R + +R N +Y ++ DL
Sbjct: 311 RGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEM 370
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMI-GAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ +K + GC RVT + I A+ K+GR + A +L E + +G P+ + +
Sbjct: 371 VQAVWKSMKVEGCVA--TRVTYMTILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNML 428
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+ Y+R G A D L + G ++P S T T + F + +D
Sbjct: 429 LNSYMRGGRHVKASDILLEMKTAG------FLPDSFTYCTLIYGFLRVRD 472
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 124/264 (46%), Gaps = 4/264 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI---PAIIQEMKASSIMPDSYTY 59
E+AE L+ +M+E + + +N+L+T Y + + +I+EM+AS + PD T+
Sbjct: 226 EEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTF 285
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + A AE+V MK G V + +++ L + Y E EKA RA + +
Sbjct: 286 TMLLGAYGHEGLTEQAEQVFNRMKARG-VQPNSYSYTALINAYAERRCPEKAARAFEMIR 344
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + + Y L+ Y + G+L V +W+S+++ ++Y+ ++
Sbjct: 345 KQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQGRYK 404
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A +E+++ D+ V N+++ +Y + GR A ++ + G P++ T+
Sbjct: 405 EARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLI 464
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGR 263
+LR D A+ + ++ G+
Sbjct: 465 YGFLRVRDQTKALKYHREMMNRGQ 488
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 9/197 (4%)
Query: 52 IMPDSYTYNVWMR-ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
+ PDS T++V M A+ + + ++M + G ++ + F + +AG ++
Sbjct: 134 VFPDSVTFSVLMNSAVKGGGSLKEVWALYQDMVQRG-ISPSVSVFGTFIKAFCDAGRLKE 192
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNM 168
A E+E N ++ Y LI YG+ G L E + +R PN +Y +
Sbjct: 193 ALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVG--TYNAL 250
Query: 169 IQVLVNLK---DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
I + K AE +E E+ D+ +++GAY EG E AE++ R +
Sbjct: 251 ITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKA 310
Query: 226 RGADPNAKTWEIFSDYY 242
RG PN+ ++ + Y
Sbjct: 311 RGVQPNSYSYTALINAY 327
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+TE+AE + +MK + +S + +L+ YA+ PEK + ++ + P TY
Sbjct: 297 LTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYT 356
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A D+ + V + MK +G VA T+ + + + G +++A ++E +N
Sbjct: 357 ALLDAYRRAGDLEMVQAVWKSMKVEGCVATR-VTYMTILDAFQKQGRYKEARDLIEEFKN 415
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ DL Y L+ Y + G + I ++ A + +Y +I + ++D
Sbjct: 416 QGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTLIYGFLRVRDQTK 475
Query: 181 AEKCFKE 187
A K +E
Sbjct: 476 ALKYHRE 482
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L+E+ K M +N L+ Y + G K I+ EMK + +PDS+TY
Sbjct: 404 KEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTYCTL 463
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ V D + A + EM G++ D T++ L +I
Sbjct: 464 IYGFLRVRDQTKALKYHREMMNRGQL-PDPKTYAKLRAI 501
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 141 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
G+L EV+ +++ + + + + I+ + L A E E +++ +
Sbjct: 153 GSLKEVWALYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIY 212
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
N++I AY + G+LE AE L R RG PN T+ YL
Sbjct: 213 NILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYL 255
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 138/323 (42%), Gaps = 11/323 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A +L+ M E + + + SL+ +T ++ ++++MK S + PD+ YN
Sbjct: 144 DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNAL 203
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L N + +++EEM GR D +++ + + E+G +E+A + L+++ +
Sbjct: 204 LNGLCKQNQLEEVSKLLEEMVEAGR-EPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y L+ + + + E R+ + R P I+Y +I L
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTV--ITYTTLIGGFSRADRLAD 320
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + ++ + D+ N ++ K G+LE A EL E + P+ T+ I +
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVN 380
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ G + A LE ++ G P+ T T + F + VD LE++K
Sbjct: 381 GLCKLGKVDDARLLLEMMLERG------CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK 434
Query: 301 KAVDDLGVEVFEPLIRTYAAAGR 323
+ V + LI Y A R
Sbjct: 435 EVSCTPDVVTYSTLIDGYCKANR 457
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 17/282 (6%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
S+ + +L+T +++ G+ + + I EM A PD T+N ++A + D+ +R +
Sbjct: 23 SNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDL---DRAL 79
Query: 80 EEMKRDGRVAADWTTFSNLASIY--VEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
+ G++ T F+ I+ + ++A + L E+ ++ H D + Y LI
Sbjct: 80 SHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137
Query: 138 GQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
+ G + + + + R P+ I+Y ++I L A K ++ + T
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVPDV--ITYTSLIVGCCQTNALDEARKLMEKMKESGLTP 195
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D N ++ K+ +LE +L E G +P+ ++ +G + A L
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKIL 255
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
EK I+ G P T + M F + +D AE LE
Sbjct: 256 EKMIEKKCG------PDVVTYNSLMDGFCKVSKMDEAERLLE 291
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 19/240 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++ +LE MKE++ + +++L+ Y K + AI+ I PD +Y+
Sbjct: 423 VDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSS 476
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-- 119
+ L + + A+ V++ M + G T S+ A I E+ + ALK L+
Sbjct: 477 MLEGLCSTGKVEEAQEVMDLMTKQGC----PPTSSHYALIIGGLCDVERGDEALKMLQVM 532
Query: 120 -NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLK 176
R +L Y LI +T + + + + + P+ A +Y ++I +
Sbjct: 533 SERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVA--TYTSLIDGFCKIN 590
Query: 177 DLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ A +CFK +SGC D N++I + + G +E A E+ + +G +P+A T+
Sbjct: 591 KMDAAYQCFKTMRDSGCEP-DKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATY 649
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 140/335 (41%), Gaps = 24/335 (7%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
++E M + + + +N L+ K G E+ +++ M PD TY++ + L
Sbjct: 324 VMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ + A ++E M G + TF+ + + +AG ++ + L+ ++ + D+
Sbjct: 384 KLGKVDDARLLLEMMLERG-CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDV 442
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI Y + + + + I P+ A SY +M++ L + + A++
Sbjct: 443 VTYSTLIDGYCKANRMQDAFAILG----ISPDKA--SYSSMLEGLCSTGKVEEAQEVMDL 496
Query: 188 W-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ GC ++IG R + A ++ + RG +PN T+ I + +
Sbjct: 497 MTKQGCPPTSSHYA-LIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
++ A++ L+ ++ G VP T + + F + +D A + ++ D
Sbjct: 556 RVEDAINVLDVMLEKG------CVPDVATYTSLIDGFCKINKMDAAYQCFKTMR----DS 605
Query: 307 GVE----VFEPLIRTYAAAGRTSPVM-LRRLKMEK 336
G E + LI + +G + + +L +EK
Sbjct: 606 GCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK 640
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++Q M P+ YTY++ + L + A V++ M G V D T+++L +
Sbjct: 528 MLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVP-DVATYTSLIDGF 586
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+ + A + K + + D AY LI+ + Q+GN+ + + + + N
Sbjct: 587 CKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDA 646
Query: 163 ISYLNMIQVLVN 174
+Y ++++ L
Sbjct: 647 ATYFSLMRSLTT 658
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 4/262 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A +LE+M E ++ N ++ K G + ++ +M + PD+ +Y
Sbjct: 298 MVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYT 357
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ L A+ ++ EM R+ + TF+ I + GL E+A ++++
Sbjct: 358 TVLKGLCRAERWDDAKELLNEMVRN-NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSE 416
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y L+ + G++ ++RS+ PNT I+Y ++ L N + L G
Sbjct: 417 HGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK-PNT--ITYTTLLTGLCNAERLDG 473
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E G ++ NV++ + ++G LE A EL E+ G PN T+ D
Sbjct: 474 AAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLD 533
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
++ + A++ L + G
Sbjct: 534 GITKDCSSEDALELLHGLVSKG 555
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 126/336 (37%), Gaps = 47/336 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y + GH + +I M + PD+YTY +R L ++ A ++++M
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDML 170
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R G + T++ L FE+A L E+ + ++ Y +I + G +
Sbjct: 171 RRG-CQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 229
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW--------------- 188
+ + L +SY +++ L K E+ F E
Sbjct: 230 DDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 289
Query: 189 ---------------------ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
E GCAT + + N++I + K+GR+++A +L G
Sbjct: 290 IRFFCRGGMVERAIQVLEQMTEHGCAT-NTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
+P+ ++ R A + L + + P+ T TF+ Q+
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN------NCPPNEVTFNTFICILCQKG 402
Query: 288 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
++ A +E + + +GV + L+ + G
Sbjct: 403 LIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 4/262 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A L+E+M E + +N+L+ + GH I + ++ ++ P++ TY
Sbjct: 403 LIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH---IDSALELFRSMPCKPNTITYT 459
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + GA ++ EM R G + TF+ L S + + G E+A ++++
Sbjct: 460 TLLTGLCNAERLDGAAELVAEMLR-GDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMME 518
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+L Y L+ + + + + L + I++ ++I +L +
Sbjct: 519 HGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEE 578
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F + V N ++ K ++NA + G PN T+ I +
Sbjct: 579 AVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIE 638
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
G +K A D L G
Sbjct: 639 GLAHEGLLKEAQDLLSVLCSRG 660
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 15/263 (5%)
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R L A D++GA R++E A D + L G A R L+ E
Sbjct: 47 LRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 106
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ D+ AY L+ Y + G+L R+ S+ +A P+ +Y +I+VL + + A
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA-PDA--YTYTPLIRVLCDRGRVADAL 163
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ GC + T V++ A + E A + + R +G PN T+ + +
Sbjct: 164 SLLDDMLRRGCQPNVVTYT-VLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 222
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILK 300
R G + A + L + G + P + + T ++ K D E F E+++
Sbjct: 223 MCREGRVDDARELLNRLPSYG------FQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 276
Query: 301 KAVDDLGVEV-FEPLIRTYAAAG 322
K + + EV F+ LIR + G
Sbjct: 277 K--NCMPNEVTFDMLIRFFCRGG 297
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 143/325 (44%), Gaps = 9/325 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEALLE+MK L + +N+L+ Y++ G ++I + ++ + + + TY +
Sbjct: 298 TAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCL 357
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A + E + +EM RD + + ++ + +IY + G ++K + L+E++
Sbjct: 358 LIDAYARAGLMDRLEALYQEM-RDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQA 416
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y +I +G+T L + + ++ +S+ ++I A
Sbjct: 417 GVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEA 476
Query: 182 EKC-FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
K +K GCA + N++I + R + E+ E R +G PN T+ D
Sbjct: 477 RKLYYKMVNDGCAP-TAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVD 535
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y + + AV+CL+ + G G PS + Q + L+ ++
Sbjct: 536 VYAQARLFQDAVECLQTMKEDGMG------PSPTAYSALANAYAQLGMCEQTLHVLQTME 589
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTS 325
K ++ + + LI ++ AGR+
Sbjct: 590 KENIEINLAMLNLLINAFSMAGRSQ 614
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++ EAL ++M++ ++ ++ + ++T+Y TG +K +++EM+ + + PD++ YN
Sbjct: 367 LMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYN 426
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + + A +M+ DG + D ++++L +AG +A + ++ N
Sbjct: 427 VIINTFGRTRQLEQARIAFFKMQ-DGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVN 485
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDL 178
+ +I G+ ++V + +R FPN ++Y ++ V +
Sbjct: 486 DGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNV--VTYTTLVDVYAQARLF 543
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 215
A +C + + + + AYA+ G E
Sbjct: 544 QDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQ 580
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 95/251 (37%), Gaps = 47/251 (18%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K LE ++L +N+L+ YA+ K + +MK PD +Y +
Sbjct: 159 KLHKALEVAEKLGSNLQRRGYNALVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVI 218
Query: 64 RAL-AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+A V DI R+ +EM+ +G V D +++L +A + L++L+
Sbjct: 219 QACRHGVVDIYTGFRLFQEMQAEG-VQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASG 277
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRI-----WRSLRLAFPNTANISYLNMIQVLVNLKD 177
D +Y L+ G+ G +E + W LR PN
Sbjct: 278 LVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLR---PN------------------ 316
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
++ N ++G Y+++G+L+ + +K R G N T+ +
Sbjct: 317 -------------------LKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCL 357
Query: 238 FSDYYLRNGDM 248
D Y R G M
Sbjct: 358 LIDAYARAGLM 368
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 10/308 (3%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
+S+ FN+L+ ++K G P +++ M A I P+ +YN + L + AE ++
Sbjct: 9 NSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELV 68
Query: 80 EEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+M R GR D T+S L S Y +AG E++ LKE+ +R D Y ++
Sbjct: 69 RDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLC 128
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
++ L E + + A I++ +I K+L A+ + + D+
Sbjct: 129 KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVV 188
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
N ++ K GRL+ AE+L ER + G P+ + F ++G + A LE+
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV--FEPLIR 316
D+ P+ T T + + +D A +E + + D G+ V + ++
Sbjct: 249 RDSDHD------PNVVTYNTILDGLCKSGKIDTALEMMEQMASS-DGCGLNVVGYSTVVD 301
Query: 317 TYAAAGRT 324
GRT
Sbjct: 302 GLCKLGRT 309
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 5/249 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE LLE+MK + ++S + K+G ++++M+ S P+ TYN
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTI 263
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I A ++E+M + +S + + G ++A ++ +
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y L+ + G + E R + + ++Y +++ L + L AE
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383
Query: 183 KCFKEWESGCATYD-----IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ +E SG D + N +IG K GR+++A + +R R +G DP+ ++
Sbjct: 384 RMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443
Query: 238 FSDYYLRNG 246
+ R+G
Sbjct: 444 IVEGLARSG 452
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 2/213 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+L++ + + E +++Q M AS + D TYN M L + AE+++E MK
Sbjct: 155 FNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A D +S+ ++G A + L+++ + + ++ Y ++ ++G +
Sbjct: 215 ASG-CAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKI 273
Query: 144 SEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
+ + + N + Y ++ L L A + D+ +
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSS 333
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
++ K G++E A E G PNA T+
Sbjct: 334 LVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 112/253 (44%), Gaps = 4/253 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E++ LL+++ L ++ + +M K+ + +++EM + P T+N
Sbjct: 99 EESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTL 158
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A+ +++ M G V AD T++ L +AG ++AE+ L+ ++
Sbjct: 159 ISGCCREKNLEMADSLLQTMAASG-VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASG 217
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ AY + ++G + +++ +R + + ++Y ++ L + A
Sbjct: 218 CAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTAL 277
Query: 183 KCFKEWES--GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ ++ S GC + + V+ G K GR + A + E R G P+ T+ +
Sbjct: 278 EMMEQMASSDGCGLNVVGYSTVVDG-LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336
Query: 241 YYLRNGDMKLAVD 253
+ G ++ AV+
Sbjct: 337 GLCKAGKIEEAVE 349
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A +++E M + ++SL+ K G E+ ++EM P++ TY
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 62 WMRALAAVNDISGAERVIEEMKRDG----RVAADWTTFSNLASIYVEAGLFEKAERALKE 117
+ L + ++ AER++EEM G +T++ L +AG + A + +
Sbjct: 369 LVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQR 428
Query: 118 LENRNAHRDLSAYQFLITLYGQTG 141
+ ++ D +Y ++ ++G
Sbjct: 429 MRSQGCDPDGVSYSTIVEGLARSG 452
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEAL E+++E L + +N+L+ Y +TG + ++ EM+ + + PD TY++
Sbjct: 292 THEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSL 351
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V++EM+ V + FS + + Y + G ++K+ + LK++++
Sbjct: 352 LIDVYAHAGRWESARIVLKEMEASN-VQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSS 410
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y +I +G+ L + R L P +++ +I
Sbjct: 411 GVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDI-VTWNTLIDCHCKSGRHDM 469
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F E + + I N+MI + ++ R E + + +G PN+ T+ D
Sbjct: 470 AEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVD 529
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y ++G A++CLE TG
Sbjct: 530 VYGKSGRFSDAIECLEVLKSTG 551
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 7/289 (2%)
Query: 34 TGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWT 93
+G + A+ +E++ + + P + YN ++ + AE V+ EM++ G V D
Sbjct: 289 SGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAG-VKPDEQ 347
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T+S L +Y AG +E A LKE+E N + + ++ Y G + +++ + +
Sbjct: 348 TYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDM 407
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
+ + Y MI L A F+ S DI N +I + K GR
Sbjct: 408 KSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRH 467
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 273
+ AEEL ++RG P T+ I + + L K G P+S
Sbjct: 468 DMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQG------LQPNS 521
Query: 274 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
T T + + + A LE+LK ++ LI YA G
Sbjct: 522 ITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRG 570
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 7/239 (2%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
EA L +++ + + +N+L+ A+ G EK ++ +M+ PD Y+ ++
Sbjct: 157 EAFLLSQRQV---LTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQY 213
Query: 66 LAAVNDISGA--ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L N I +++ E++ D ++ D +++ + +AG +A R L ++
Sbjct: 214 LTRSNKIDSPILQKLYAEIETD-KIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGL 272
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ S +I G +G E ++ +R +Y +++ V L AE
Sbjct: 273 NPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEF 332
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE-IFSDY 241
E E D + +++I YA GR E+A + + PN+ + I ++Y
Sbjct: 333 VVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANY 391
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 9/265 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+AEA+ E+MKE L FN+L+ YA+ G ++ +II EM+ S + PD +TY +
Sbjct: 332 TEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGL 391
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V A ++++M+ V + FS + + Y + G ++K L+E++N
Sbjct: 392 LVDAYANVGRWESARHLLKQMEARN-VQPNTFIFSRILASYRDRGEWQKTFEVLREMKNS 450
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N D Y +I +G+ L + + +++ +I A
Sbjct: 451 NVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRA 510
Query: 182 EKCFKEWES----GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ F+E + C T N+MI + ++ + + + L + + +G PN T+
Sbjct: 511 AELFEEMQERGYLPCPT----TYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTT 566
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTG 262
D Y +G A+DCLE G
Sbjct: 567 LVDIYGHSGRFNDAIDCLEAMKSAG 591
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 133/326 (40%), Gaps = 23/326 (7%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
+ L E+++ + + N ++ +AK G P + + ++AS + P + T+ + A
Sbjct: 266 QKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISA 325
Query: 66 LAAVNDISGAERVIEEMKRDG---RVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L AE + EEMK G R+ A F+ L Y G ++AE + E+E
Sbjct: 326 LGNHGRTEEAEAIFEEMKEGGLKPRIKA----FNALLKGYARKGSLKEAESIISEMEKSG 381
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y L+ Y G + + + R PNT S ++L + +D
Sbjct: 382 LSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFS-----RILASYRDRGE 436
Query: 181 AEKCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+K F +E ++ D NVMI + K L++A E +R G +P+ TW
Sbjct: 437 WQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNT 496
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
D + ++G A + E+ + G ++P T + +++ D + L
Sbjct: 497 LIDCHRKHGYHDRAAELFEEMQERG------YLPCPTTYNIMINSLGEQEKWDEVKILLG 550
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGR 323
++ V + L+ Y +GR
Sbjct: 551 KMQSQGLLPNVVTYTTLVDIYGHSGR 576
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 7/242 (2%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A++ ++ NL FS S+ L G EK+ + ++ P TYN + A
Sbjct: 164 AVVSWLQRHNLCFSYELLYSI--LIHALGRSEKLYEAFILSQKQTLTP--LTYNALIGAC 219
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA--ERALKELENRNAH 124
A ND+ A ++ M++DG +D+ +S + + ++ +E+E+
Sbjct: 220 ARNNDLEKALNLMSRMRQDG-FQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIE 278
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D +I + + G+ + ++ + N +++ +I L N AE
Sbjct: 279 LDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAI 338
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F+E + G I+ N ++ YA++G L+ AE + + G P+ T+ + D Y
Sbjct: 339 FEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYAN 398
Query: 245 NG 246
G
Sbjct: 399 VG 400
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 7/294 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL +MK+ N+ + +NSL+ K G EK+ ++ EM +I P+ +T+++
Sbjct: 220 DAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSIL 279
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+ V+ M G V D T+S + Y G ++A R L ++
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEKG-VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ +Y LI Y + NL++ +++ + ++Y ++ L+ + + A+
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAK 398
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F E T DI + + ++ Y K G +E A L + R D N + + +
Sbjct: 399 KIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGL 458
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+N ++ A EK G +P T + F +E D +G L
Sbjct: 459 CKNDRVREAHAIFEKLPSIG------LIPDVRTYNVMITGFCREGLFDEVKGIL 506
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 113/264 (42%), Gaps = 5/264 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A+ ++ M E + + ++++M Y G ++ + ++ I P+ ++Y++
Sbjct: 289 VEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI 348
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +++ A ++ E+ + G + D T+S + +E G A++ E+
Sbjct: 349 LINGYCKKKNLAKAMQLFGEISQKG-LKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRV 407
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS-YLNMIQVLVNLKDLPG 180
D+ + L+ Y + G + E ++ L +T NIS Y +I L +
Sbjct: 408 GPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDT-NISFYTVVINGLCKNDRVRE 466
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F++ S D+R NVMI + +EG + + + + G N T+ +
Sbjct: 467 AHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQ 526
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRG 264
+ R+ + V +++ GRG
Sbjct: 527 GFFRSNKISEIVSFMKEM--AGRG 548
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ ++M +K GH EK ++++ M+ + PD TY++ + AL ++ A ++ EMK
Sbjct: 171 YGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMK 230
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ + + T+++L + G +EK + L E+ N N + ++ + LI + G +
Sbjct: 231 QKN-IPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + R + I+Y ++ + A + F +I +++
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTW 235
I Y K+ L A +L ++G P+ T+
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTY 381
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A +L +M + +N+L+ K G + I+ EM A +I+P+ TY+
Sbjct: 200 EAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTM 259
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + A + EMK G ++ D +++ L SIY + G FE+A +E+EN
Sbjct: 260 IDGYAKAGRLDDARNLFNEMKFLG-ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSG 318
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+D+ Y L+ YG+ V +++ ++ + ++Y +I V A
Sbjct: 319 IRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAM 378
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E++ D+ + + +I A K G +E+A L + + G PN T+ D +
Sbjct: 379 DVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAF 438
Query: 243 LRNGDMKLAVD 253
R + VD
Sbjct: 439 GRPATTESVVD 449
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE- 76
G + F+++++ Y ++G+ + I MK + P+ TYN + A G E
Sbjct: 109 GNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGK----GGVEF 164
Query: 77 -RVIE---EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
RV+E EM R+G + D TF++L ++ + GL+E A E+ NR +D+ Y
Sbjct: 165 KRVLEIFDEMLRNG-MQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNT 223
Query: 133 L-----------------------------------ITLYGQTGNLSEVYRIWRSLRLAF 157
L I Y + G L + ++ ++
Sbjct: 224 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG 283
Query: 158 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 217
+ +SY ++ + L A +E E+ D+ N ++G Y K+ + +
Sbjct: 284 ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVR 343
Query: 218 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
++ E + R PN T+ D Y + G + A+D
Sbjct: 344 KVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMD 379
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 40/335 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A LL +M+E+ F +L+ A+ G A++ E+K S + PD YNV
Sbjct: 196 ERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVC 255
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A + E+K G + D +++++ + +AG +AE ++E
Sbjct: 256 IDCFGKAGNVDMAWKFFHELKAQG-LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAER 314
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ AY +I YG G + Y++ LR + +S+ +++ L + + A
Sbjct: 315 SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL 374
Query: 183 KCF----KEWESGCATYDIRV------------------------------TNVMIGAYA 208
F K+ E +TY+I + N+M+
Sbjct: 375 SLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 434
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K +LE A ++ E A +RG +P+ T+ D + G + A EK +D G
Sbjct: 435 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH--NAN 492
Query: 269 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
V + IR F H +E DG + F E++++
Sbjct: 493 PVVYTSLIRNFFIHGRKE---DGHKIFKELIRRGC 524
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 1/230 (0%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E +LE+M L G + L + + + M+ P Y V + A
Sbjct: 129 EKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
LA A ++ +M+ G F+ L G A + E++
Sbjct: 189 LAEARRPERALELLRQMQEVG-YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEP 247
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D+ Y I +G+ GN+ ++ + L+ ++SY +MI VL L AE+ F
Sbjct: 248 DIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 307
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ E+ + N MI Y GR E+A +L ER R RG P+ ++
Sbjct: 308 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 357
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 110/257 (42%), Gaps = 5/257 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
++A L EKM L+ G ++ P + SL+ + G E I +E+ PD
Sbjct: 474 VDEAYRLFEKM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 531
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N +M + ++ + E+++ G + D ++S L +AG + ++
Sbjct: 532 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLP-DVRSYSILIHGLTKAGQARETSNIFHAMK 590
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ D AY ++ + ++G + + Y I ++ +Y ++ L + L
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 650
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F+E +S ++ + + +I + K GR++ A + E ++G PN TW
Sbjct: 651 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710
Query: 240 DYYLRNGDMKLAVDCLE 256
D ++ ++ A+ C +
Sbjct: 711 DALVKAEEINEALVCFQ 727
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 99/216 (45%), Gaps = 5/216 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E+ K + + + ++SL+ + K G ++ I++EM + P+ YT+N
Sbjct: 650 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 709
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL +I+ A + MK + + + T+S L + + KA ++++ +
Sbjct: 710 LDALVKAEEINEALVCFQSMK-EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 768
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG 180
++ Y +I+ + GN+++ Y ++ + P+ A S+ +I+ + N
Sbjct: 769 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAA--SFNALIEGMSNANRAME 826
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
A + F+E +I+ ++ A K LE A
Sbjct: 827 AYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KAEA+++ M++L ++ +N ++ L+ +TG+ +K+ A++ EM+ + I D +T +
Sbjct: 166 VDKAEAVMQNMRDLGFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGI 225
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A AA+ DI E+++ M+ D V DW ++ +A+ Y +AGL +KA LK+ E
Sbjct: 226 QLSAYAAICDIQRMEKIMSRMESDANVVTDWCNYAIVANGYRKAGLMDKALEMLKKSEGL 285
Query: 122 -NAHRDLSAYQFLIT 135
+ SAY FL+T
Sbjct: 286 ITGKKRSSAYNFLLT 300
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 17/291 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A ALL KM E L S + +NSL+ K G+ + ++ M + ++PD +TY+V
Sbjct: 195 VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ L I A + +K G + A+ ++ L Y +AG + A L +
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKG-IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE 313
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVY-----RIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ + S Y LI + + E I + L+ P +Y +I ++
Sbjct: 314 DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVP-----TYTILIVAMLKEG 368
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
D A + + S D+ + I A+ G ++ AE++ RG P+A T+
Sbjct: 369 DFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYT 428
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
+ D Y G + A D L++ DTG PS T ++H +E+
Sbjct: 429 LVIDAYGGLGLLNPAFDVLKRMFDTG------CDPSHHTYSCLIKHLLKEE 473
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 126/332 (37%), Gaps = 9/332 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ +L++M E L S +N+L+ Y K G E I+ M ++S P+ TYN
Sbjct: 126 EEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNEL 185
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A ++ +M + R+ T+++L + G + A R L +
Sbjct: 186 ICGFCRKKNVHRAMALLSKM-LESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENG 244
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y I + G + E ++ SL+ + Y +I + A
Sbjct: 245 VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDAN 304
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + N +I KE +++ A L E ++G T+ I
Sbjct: 305 SLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAM 364
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L+ GD A L++ + +G + P F+ F ++ AE + ++ +
Sbjct: 365 LKEGDFDYAHRILDQMVSSG------YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFER 418
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPV--MLRRL 332
+ +I Y G +P +L+R+
Sbjct: 419 GVMPDALTYTLVIDAYGGLGLLNPAFDVLKRM 450
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 101/255 (39%), Gaps = 7/255 (2%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
+ EM+ P+ +TY V + A+ + R+++EM G V + T++ L Y
Sbjct: 96 LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPS-VPTYNALIDGY 154
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+ G+ E A+ L + + + + + Y LI + + N+ + + + +
Sbjct: 155 CKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSV 214
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y ++I + L A + D +V I K+GR+E A L
Sbjct: 215 VTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNS 274
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
+ +G N + D Y + G M A L++ + +P+S T +
Sbjct: 275 LKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTE------DCLPNSSTYNALIDG 328
Query: 283 FEQEKDVDGAEGFLE 297
+E+ V A +E
Sbjct: 329 LCKERKVQEALLLME 343
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 7/234 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A L+E M + L + + L+ K G + I+ +M +S PD Y Y
Sbjct: 335 VQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTA 394
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ A +I AE ++ M G V D T++ + Y GL A LK + +
Sbjct: 395 FIHAFCTRGNIKEAEDMMSMMFERG-VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDT 453
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
Y LI + E+ + ++++ L + N+ + ++ V +K
Sbjct: 454 GCDPSHHTYSCLIKHLLK----EELTKKYKNVALC-DSIPNVFFADVADVWKMMKFETAL 508
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
E K E GC+ +I +I K GRL A++L + RG P+ +
Sbjct: 509 ELFEKMLEHGCSP-NINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIY 561
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 113/290 (38%), Gaps = 20/290 (6%)
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
ND++ A V M + G + +++NL E G ++ K++ + + +
Sbjct: 18 NDVNSAFSVFNMMPKKG-CRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76
Query: 130 YQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y ++ ++G E ++ + R PN +Y MI + L + E
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEMRERGCEPNIH--TYTVMINAMCKETKLEEGRRILDE 134
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ N +I Y KEG +E A+E+ + +PN +T+ + R +
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKN 194
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK---AVD 304
+ A+ L K +++ + PS T + + + +D A L ++ + D
Sbjct: 195 VHRAMALLSKMLES------RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD 248
Query: 305 DLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEKVEVSEA-SKKLLEAIC 351
VF I T GR + V+ LK + ++ +E L++ C
Sbjct: 249 QWTYSVF---IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYC 295
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
E+ + ++++ +N ++ L + G ++ +++ +M+ +PD +Y+V + V +
Sbjct: 245 EVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLG 304
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
+++EE++R G + + T++++ S + G +AE+ L+ ++N+ D Y L
Sbjct: 305 KVLKLMEELQRKG-LKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTL 363
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 193
I+ +G++GN+S Y+++ ++ ++Y +MI L + A K F E S
Sbjct: 364 ISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGL 423
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
D +I Y K G ++ A L + +G PN T+ D + G++ +A +
Sbjct: 424 KPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANE 483
Query: 254 CLEKAIDTG 262
L + + G
Sbjct: 484 LLHEMSEKG 492
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 115/261 (44%), Gaps = 5/261 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K L+E+++ L + +NS+++ KTG + +++ MK I PD+ Y +
Sbjct: 305 KVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLI 364
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++S ++ +EMKR ++ D+ T++++ +AG +A + E+ ++
Sbjct: 365 SGFGKSGNVSVEYKLFDEMKRK-KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGL 423
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y LI Y + G + E + + + + PN ++Y ++ L ++ A
Sbjct: 424 KPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNV--VTYTALVDGLCKCGEVDIA 481
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E ++ N +I K G +E A +L E G P+ T+ D
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y + G+M A + L +D G
Sbjct: 542 YCKMGEMAKAHELLRIMLDKG 562
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 41/280 (14%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE +L MK + ++ + +L++ + K+G+ + EMK I+PD TY +
Sbjct: 340 EAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMI 399
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-----------LFEK-- 110
L + A ++ EM G + D T++ L Y +AG + EK
Sbjct: 400 HGLCQAGKVVEARKLFSEMLSKG-LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458
Query: 111 ----------------------AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
A L E+ + ++ Y LI + GN+ + +
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK 518
Query: 149 IWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
+ + LA FP+T I+Y ++ + ++ A + + I NV++
Sbjct: 519 LMEEMDLAGFFPDT--ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNG 576
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTW-EIFSDYYLRN 245
+ G LE+ E L + +G PNA T+ + Y +RN
Sbjct: 577 FCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN 616
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 102/254 (40%), Gaps = 36/254 (14%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL +M E L + +N+L+ K G+ E+ +++EM + PD+ TY M
Sbjct: 481 ANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMD 540
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + +++ A ++ M G + TF+ L + + +G+ E ER +K + ++
Sbjct: 541 AYCKMGEMAKAHELLRIMLDKG-LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIM 599
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLR----LAFPNTANI----------------- 163
+ + + L+ Y N+ I++ + + NT NI
Sbjct: 600 PNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFL 659
Query: 164 --------------SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
SY ++I+ K A K F+E + + + ++ + +
Sbjct: 660 HKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYE 719
Query: 210 EGRLENAEELKERA 223
EG EN EL + A
Sbjct: 720 EGNWENTLELCDEA 733
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 103/245 (42%), Gaps = 6/245 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L +M E L + + + +L+ K G + ++ EM + P+ TYN
Sbjct: 444 KEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L V +I A +++EEM G D T++ + Y + G KA L+ + ++
Sbjct: 504 INGLCKVGNIEQAVKLMEEMDLAG-FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + L+ + +G L + R+ W + PN + L M Q + ++
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL-MKQYCIR-NNMRA 620
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFS 239
+ +K + D N++I + K ++ A L + +G A ++ +
Sbjct: 621 TIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIK 680
Query: 240 DYYLR 244
+Y R
Sbjct: 681 GFYKR 685
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E E L++ M + + ++ FNSLM Y + I + M A ++PD+ TYN
Sbjct: 582 MLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYN 641
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ++ ++ A + +EM G + ++++L + + FE+A + +E+
Sbjct: 642 ILIKGHCKARNMKEAWFLHKEMVEKG-FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRT 700
Query: 121 RNAHRDLSAYQFLITLYGQTGN 142
+ Y + + + GN
Sbjct: 701 HGFIAEKEIYDIFVDVNYEEGN 722
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 9/282 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA L++ M+ L + +NS++ L K G + +++EM + I+PD+ Y
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A + +EM +++ D+ T++ L + + G + + E+ +R
Sbjct: 370 IHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGA 181
D Y LI +Y + G + + + + + T NI +Y +I L +L A
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM-VQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E ++ + N M+ K G +E A +L + G DP+A T+ D
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
Y R GD+ A L++ +D G P+ T M F
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQ------PTVVTFNVLMNGF 583
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL++M++ L + +NS++ K G+ E+ +++EM+ + I PD+ TY
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + DI A ++++EM G + TF+ L + + G+ E +R L + +
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRG-LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y L+ + +++ +I++ +R + +Y +I+ ++L A
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+KE + N +I + K+ + A EL E R G + + + F D
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMC 723
Query: 243 LRNGDMKLAVDCLEKAID 260
GD+++ ++ ++AI+
Sbjct: 724 YEEGDVEITLNLCDEAIE 741
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 127/308 (41%), Gaps = 13/308 (4%)
Query: 20 SSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
SS P +++++ Y G +K ++ +M+ + P+ YTYN + L + A
Sbjct: 288 SSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA 347
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
E+V+ EM ++ D ++ L + + G A + E+ ++ D Y LI
Sbjct: 348 EKVLREMMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQ 406
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
+GQ G + E ++ + ++Y +I V ++ A E T
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
+I +I K G L+ A EL + R++G N + + + G+++ A+ L
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK-L 525
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPL 314
K ++ D P + T T + + + D+D A L E+L + + V F L
Sbjct: 526 MKEMEVAGID-----PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP-TVVTFNVL 579
Query: 315 IRTYAAAG 322
+ + G
Sbjct: 580 MNGFCMLG 587
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E + LL M E + ++ +N+LM + I + M+ + PDS TYN
Sbjct: 588 MLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYN 647
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ++ ++ A + +EM G V T+++ L + + F +A +E+
Sbjct: 648 ILIKGHCKARNLKEAWFLYKEMIEKGYVPT-VTSYNALIKRFYKKRKFXEARELFEEMRG 706
Query: 121 RNAHRDLSAYQFLITLYGQTGNL 143
D Y F + + + G++
Sbjct: 707 HGLVADGEIYNFFVDMCYEEGDV 729
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 9/282 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA L++ M+ L + +NS++ L K G + +++EM + I+PD+ Y
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A + +EM +++ D+ T++ L + + G + + E+ +R
Sbjct: 370 IHGFFKLGHVRTANKWFDEM-LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGA 181
D Y LI +Y + G + + + + + T NI +Y +I L +L A
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM-VQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E ++ + N M+ K G +E A +L + G DP+A T+ D
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
Y R GD+ A L++ +D G P+ T M F
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQ------PTVVTFNVLMNGF 583
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 121/258 (46%), Gaps = 1/258 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL++M++ L + +NS++ K G+ E+ +++EM+ + I PD+ TY
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + DI A ++++EM G + TF+ L + + G+ E +R L + +
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRG-LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y L+ + +++ +I++ +R + +Y +I+ ++L A
Sbjct: 604 IVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAW 663
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+KE + N +I + K+ ++ A EL E R G + + + F D
Sbjct: 664 FLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMC 723
Query: 243 LRNGDMKLAVDCLEKAID 260
GD+++ ++ ++AI+
Sbjct: 724 YEEGDVEITLNLCDEAIE 741
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 127/308 (41%), Gaps = 13/308 (4%)
Query: 20 SSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
SS P +++++ Y G +K ++ +M+ + P+ YTYN + L + A
Sbjct: 288 SSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA 347
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
E+V+ EM ++ D ++ L + + G A + E+ ++ D Y LI
Sbjct: 348 EKVLREMMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQ 406
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
+GQ G + E ++ + ++Y +I V ++ A E T
Sbjct: 407 GFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTP 466
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
+I +I K G L+ A EL + R++G N + + + G+++ A+ L
Sbjct: 467 NIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK-L 525
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPL 314
K ++ D P + T T + + + D+D A L E+L + + V F L
Sbjct: 526 MKEMEVAGID-----PDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP-TVVTFNVL 579
Query: 315 IRTYAAAG 322
+ + G
Sbjct: 580 MNGFCMLG 587
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E + LL M E + ++ +N+LM + I + M+ + PDS TYN
Sbjct: 588 MLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYN 647
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ++ ++ A + +EM G V T+++ L + + +A +E+
Sbjct: 648 ILIKGHCKARNLKEAWFLYKEMIEKGYVPT-VTSYNALIKRFYKKKKILEARELFEEMRG 706
Query: 121 RNAHRDLSAYQFLITLYGQTGNL 143
D Y F + + + G++
Sbjct: 707 HGLVADGEIYNFFVDMCYEEGDV 729
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 14/258 (5%)
Query: 2 TEKAEALLEKMKE-----------LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 50
TE AEA+L +M E L + + M + +LMT YA G E A+++ M+ +
Sbjct: 244 TEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEA 303
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
I P+ TY V M A D+ GAE V+ M VA + T++ L Y G
Sbjct: 304 CIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMI-SAYVAPNANTYTTLLHAYTVNGNAAG 362
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
AE L +E + L+T+Y G + + + A +++ ++
Sbjct: 363 AEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLN 422
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGAD 229
V D+ GAE+ + E+ A D +T N ++ YA +G + AE + R R +G
Sbjct: 423 AYVVAGDVGGAEQVLRRREA-EAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVG 481
Query: 230 PNAKTWEIFSDYYLRNGD 247
P+ T Y GD
Sbjct: 482 PDETTLSTLLHAYAEAGD 499
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 128/311 (41%), Gaps = 20/311 (6%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM- 82
F+++M +YA PE ++ + A ++PD TY M A A D GAE V+ M
Sbjct: 196 FHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRML 255
Query: 83 KRDG---------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
+ +G RV + T++ L + Y G E +E L+ +E ++ Y L
Sbjct: 256 EGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVL 315
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAF--PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 191
+T Y G++ + R + A+ PN AN +Y ++ + GAE+ E+
Sbjct: 316 MTAYTLRGDVKGAEGVLRRMISAYVAPN-AN-TYTTLLHAYTVNGNAAGAEEVLARMEAA 373
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
++ YA G +E+A+ + R G P A ++ + Y+ GD+ A
Sbjct: 374 GVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGA 433
Query: 252 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
L R + + T T M + + DV GAEG L ++
Sbjct: 434 EQVLR------RREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTL 487
Query: 312 EPLIRTYAAAG 322
L+ YA AG
Sbjct: 488 STLLHAYAEAG 498
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E +EA+LE+M+E + + M + LMT Y G + +++ M ++ + P++ TY
Sbjct: 291 EGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTL 350
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + +GAE V+ M+ G V TF+ L ++Y G E A+ L +E
Sbjct: 351 LHAYTVNGNAAGAEEVLARMEAAG-VLPTALTFATLMTVYAARGEVESAKGVLARMEAAG 409
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGA 181
A+ L+ Y G++ ++ R A+P+ ++Y ++ + D+ GA
Sbjct: 410 VGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFP-LTYNTLMNGYADKGDVAGA 468
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E + D + ++ AYA+ G AE +
Sbjct: 469 EGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAV 506
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 117/307 (38%), Gaps = 39/307 (12%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQE----MKASSIMPDSYTYNVWMRALAAVNDISGAER 77
+PF + K P P+ E + PD T++ M+ A D GAE
Sbjct: 155 IPFTRGAIMRHKQASPRSNPSRPAEDEERRAVCDLSPDLPTFHTVMKVYADERDPEGAEM 214
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V+ + G + D T++ L Y G E AE L+ + L
Sbjct: 215 VLGWLLARG-LLPDVVTYTTLMHAYAGRGDTEGAEAVLRRM-----------------LE 256
Query: 138 GQTGNL--SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
G+ G + EV R+ PN ++Y ++ D+ G+E + E C
Sbjct: 257 GEGGRVREEEVLRV-------LPNV--MTYTTLMTAYAAGGDVEGSEAVLERMEEACIAP 307
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
++ V++ AY G ++ AE + R PNA T+ Y NG+ A + L
Sbjct: 308 NVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVL 367
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
R + +P++ T T M + +V+ A+G L ++ A F+ L+
Sbjct: 368 ------ARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLL 421
Query: 316 RTYAAAG 322
Y AG
Sbjct: 422 NAYVVAG 428
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 11/336 (3%)
Query: 6 EALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AL KE+ GF + +N+ + + GH ++ M PD +TYN +
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 342
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L+ ++ A+ ++ +M G D TTF+ L E+A +EL +
Sbjct: 343 NCLSKNGELDEAKGIVNQMVDRG-CLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGL 401
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ + LI + G+ R++ ++ + ++Y +I L ++ L A
Sbjct: 402 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALD 461
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
KE ES N +I A K+ R+E AEE+ ++ G +A T+ D
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLC 521
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ + A + +E+ + G PS+ T + + H+ ++ D+ A LE +
Sbjct: 522 KAKRIDDATELIEQMVKEG------LQPSNITYNSILTHYCKQGDLKKAADILETMTANG 575
Query: 304 DDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKV 337
++ V + LI AGRT +LR ++++ +
Sbjct: 576 FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGI 611
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 36/260 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ ++ +M + + FN+L+ E+ + +E+ + PD YT+N+
Sbjct: 352 DEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNIL 411
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL V D R+ EEMK G A D T++ L G A LKE+E+
Sbjct: 412 INALCKVGDPHLGIRLFEEMKSSG-CAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
R + ++Y +I L + AE
Sbjct: 471 CPR-----------------------------------STVTYNTIIDALCKQMRIEEAE 495
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F + ++ + N +I K R+++A EL E+ + G P+ T+ +Y
Sbjct: 496 EVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHY 555
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ GD+K A D LE G
Sbjct: 556 CKQGDLKKAADILETMTANG 575
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 104/275 (37%), Gaps = 38/275 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ + A+ + + ++ EM I PD T N ++AL + + A ++EEM
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKA-------------------------------- 111
VA D TTF+ L ++E G E A
Sbjct: 223 SHA-VAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRV 281
Query: 112 ERALKELENRNA---HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 168
E AL ++ A D Y + Q G++S ++ + + +Y +
Sbjct: 282 EDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 341
Query: 169 IQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
I L +L A+ + + GC D N +I A + RLE A +L +G
Sbjct: 342 INCLSKNGELDEAKGIVNQMVDRGCLP-DTTTFNTLIVALCSQNRLEEALDLARELTVKG 400
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
P+ T+ I + + GD L + E+ +G
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 435
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L+E+M + L S++ +NS++T Y K G +K I++ M A+ D TY
Sbjct: 527 DDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTL 586
Query: 63 MRALAAVNDISGAERVIEEMKRDG 86
+ L A +++ M+ G
Sbjct: 587 INGLCKAGRTQVALKLLRGMRIKG 610
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 14/258 (5%)
Query: 2 TEKAEALLEKMKE-----------LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS 50
TE AEA+L +M E L + + M + +LMT YA G E A+++ M+ +
Sbjct: 258 TEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEA 317
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
I P+ TY V M A D+ GAE V+ M VA + T++ L Y G
Sbjct: 318 CIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMI-SAYVAPNANTYTTLLHAYTVNGNAAG 376
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
AE L +E + L+T+Y G + + + A +++ ++
Sbjct: 377 AEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLN 436
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGAD 229
V D+ GAE+ + E+ A D +T N ++ YA +G + AE + R R +G
Sbjct: 437 AYVVAGDVGGAEQVLRRREA-EAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVG 495
Query: 230 PNAKTWEIFSDYYLRNGD 247
P+ T Y GD
Sbjct: 496 PDETTLSTLLHAYAEAGD 513
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 128/311 (41%), Gaps = 20/311 (6%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM- 82
F+++M +YA PE ++ + A ++PD TY M A A D GAE V+ M
Sbjct: 210 FHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRML 269
Query: 83 KRDG---------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
+ +G RV + T++ L + Y G E +E L+ +E ++ Y L
Sbjct: 270 EGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERMEEACIAPNVMTYTVL 329
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAF--PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 191
+T Y G++ + R + A+ PN AN +Y ++ + GAE+ E+
Sbjct: 330 MTAYTLRGDVKGAEGVLRRMISAYVAPN-AN-TYTTLLHAYTVNGNAAGAEEVLARMEAA 387
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
++ YA G +E+A+ + R G P A ++ + Y+ GD+ A
Sbjct: 388 GVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGA 447
Query: 252 VDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
L R + + T T M + + DV GAEG L ++
Sbjct: 448 EQVLR------RREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTL 501
Query: 312 EPLIRTYAAAG 322
L+ YA AG
Sbjct: 502 STLLHAYAEAG 512
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E +EA+LE+M+E + + M + LMT Y G + +++ M ++ + P++ TY
Sbjct: 305 EGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTL 364
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + +GAE V+ M+ G V TF+ L ++Y G E A+ L +E
Sbjct: 365 LHAYTVNGNAAGAEEVLARMEAAG-VLPTALTFATLMTVYAARGEVESAKGVLARMEAAG 423
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGA 181
A+ L+ Y G++ ++ R A+P+ ++Y ++ + D+ GA
Sbjct: 424 VGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFP-LTYNTLMNGYADKGDVAGA 482
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E + D + ++ AYA+ G AE +
Sbjct: 483 EGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAV 520
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 117/307 (38%), Gaps = 39/307 (12%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQE----MKASSIMPDSYTYNVWMRALAAVNDISGAER 77
+PF + K P P+ E + PD T++ M+ A D GAE
Sbjct: 169 IPFTRGAIMRHKQASPRSNPSRPAEDEERRAVCDLSPDLPTFHTVMKVYADERDPEGAEM 228
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V+ + G + D T++ L Y G E AE L+ + L
Sbjct: 229 VLGWLLARG-LLPDVVTYTTLMHAYAGRGDTEGAEAVLRRM-----------------LE 270
Query: 138 GQTGNL--SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
G+ G + EV R+ PN ++Y ++ D+ G+E + E C
Sbjct: 271 GEGGRVREEEVLRV-------LPNV--MTYTTLMTAYAAGGDVEGSEAVLERMEEACIAP 321
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
++ V++ AY G ++ AE + R PNA T+ Y NG+ A + L
Sbjct: 322 NVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVL 381
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
R + +P++ T T M + +V+ A+G L ++ A F+ L+
Sbjct: 382 ------ARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLL 435
Query: 316 RTYAAAG 322
Y AG
Sbjct: 436 NAYVVAG 442
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 131/301 (43%), Gaps = 11/301 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ +LE M++ N + + ++SL+ KTG + + M I P+ TYN
Sbjct: 234 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 293
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N + A ++EEM G D T++ L + G +A R +++ +
Sbjct: 294 IHGFCMTNGVDSALLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ Y LI + + + ++ + + P+ +++ +++ N +
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV--VTFSTLVEGYCNAGLVDD 410
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ +E + + D+ ++ + K GR+ A + +R +RG PN T+ D
Sbjct: 411 AERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALID 470
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ R G +A LE+ + G P+ T R+ + F D++ A LE L+
Sbjct: 471 AFCRAGKPTVAYKLLEEMVGNG------VQPNVITYRSLIGGFCGTGDLEEARKMLERLE 524
Query: 301 K 301
+
Sbjct: 525 R 525
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 114/245 (46%), Gaps = 2/245 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+A LL++MKE L + + +++++ + + + + ++M + MP+ TYN
Sbjct: 59 HRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 118
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A +++EM+ G + D ++ L + + G + A + ++ N +
Sbjct: 119 LSGLCRNGLMDEAYELLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 177
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ AY LI +TG L E +++ +R +++ ++ L L A+
Sbjct: 178 CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 237
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSDY 241
+ + E T ++ + +I K G++ +A+E+ +R RG +PN T+ + +
Sbjct: 238 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297
Query: 242 YLRNG 246
+ NG
Sbjct: 298 CMTNG 302
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 134/329 (40%), Gaps = 19/329 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A LL++M+E L +++LM KTG + + ++ PD Y+
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A ++ E+M R+ D TF+ L + ++A++ L+ +E+
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
RN ++ Y LI +TG + + +++ + R PN ++Y ++I +
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV--VTYNSLIHGFCMTNGV 303
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A +E + DI N +I K GR A L + + +P+ T+
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363
Query: 239 SDYY--LRNGDM--KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 294
+ L DM L D L++A+ +P T T + + VD AE
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAV----------LPDVVTFSTLVEGYCNAGLVDDAER 413
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
LE + + V + L+ + GR
Sbjct: 414 LLEEMVASDCSPDVYTYTSLVDGFCKVGR 442
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 115/294 (39%), Gaps = 7/294 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A KMK+ + +N L+ + K + +++EMK S + P+ TY+ +
Sbjct: 25 EATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 84
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ A ++ +M +G + T++ L S GL ++A L E+ R
Sbjct: 85 HGFCRQTKVDTAYKLFRQMVENG-CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 143
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D +Y L+ +TG + +++ ++Y +I L L A K
Sbjct: 144 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACK 203
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F++ D+ ++ K RL+ A+++ E R PN T+ D
Sbjct: 204 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 263
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G ++ A + ++ I G P+ T + + F VD A +E
Sbjct: 264 KTGQVRDAQEVFKRMIVRG------IEPNVVTYNSLIHGFCMTNGVDSALLLME 311
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE LLE+M + + SL+ + K G + +++ M P+ TY
Sbjct: 407 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYT 466
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE- 119
+ A + A +++EEM +G V + T+ +L + G E+A + L+ LE
Sbjct: 467 ALIDAFCRAGKPTVAYKLLEEMVGNG-VQPNVITYRSLIGGFCGTGDLEEARKMLERLER 525
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ N D+ AY+ ++ +TG +S + +++ + + Y+ +I+ L K+L
Sbjct: 526 DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELG 585
Query: 180 GAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A + +E S + + +I A+EGR E A L +
Sbjct: 586 KAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALAD 628
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 4/260 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA LL+++++ L + + +L+ + A E +M+A P+ + Y +
Sbjct: 226 KAMELLKELQDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQMRAEGHSPNMFHYGSLL 285
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A + D A+ +IE+MK G V + + L +YV GLFEK+ + L ELE+
Sbjct: 286 NAYSINGDYKKADELIEDMKLTGLVP-NKVILTTLLKVYVRGGLFEKSRKLLSELESLGY 344
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y L+ + G++ E ++ ++ T ++ MI L A+
Sbjct: 345 GENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNVKTDGYAHSIMISAFCRGGLLEEAKL 404
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
K++E+ YDI + N M+ AY + G +E+ ++ + P+ T+ I Y+
Sbjct: 405 LAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFF 464
Query: 244 RNGDMKLAVDCLEKAIDTGR 263
+ KL + C D R
Sbjct: 465 KE---KLYLLCYRTLEDMHR 481
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA+ L+E MK L + + +L+ +Y + G EK ++ E+++ + Y +
Sbjct: 295 KKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLSELESLGYGENEMPYCLL 354
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M LA I A+ V +EMK V D S + S + GL E+A+ K+ E
Sbjct: 355 MDGLAKAGSIREAKTVFDEMKAKN-VKTDGYAHSIMISAFCRGGLLEEAKLLAKDFEATY 413
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D+ ++ Y + G + V ++ R +
Sbjct: 414 DRYDIVILNTMLCAYCRAGEMESVMQMLRKM 444
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EK+ LL +++ L G + MP+ LM AK G + + EMKA ++ D Y ++
Sbjct: 328 LFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNVKTDGYAHS 387
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A + A+ + ++ + D + + Y AG E + L+++++
Sbjct: 388 IMISAFCRGGLLEEAKLLAKDFEATYD-RYDIVILNTMLCAYCRAGEMESVMQMLRKMDD 446
Query: 121 RNAHRDLSAYQFLITLY 137
D + + LI +
Sbjct: 447 LAISPDYNTFHILIKYF 463
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L++M++ N+ + +++L+ L K K +I +KAS+I PD YN +
Sbjct: 202 LQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGK 261
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +++EM RD V D ++S L +IYV+ F +A E+ DL+
Sbjct: 262 AKLFREARLLLQEM-RDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLT 320
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ E R++ S+R ISY +++V A F+
Sbjct: 321 TCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLM 380
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+S ++ N MI Y K E A L + +RG +PNA T+ + + G +
Sbjct: 381 QSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKL 440
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 441 DRAAILFQKLRSSG 454
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A+ L M+++ + + + +N+L+ +Y + + + + M++ + + TYN
Sbjct: 334 MPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYN 393
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A +I+EM + G + + T+S + SI+ +AG ++A ++L +
Sbjct: 394 TMINIYGKTLEHEKATNLIQEMNKRG-IEPNAITYSTIISIWEKAGKLDRAAILFQKLRS 452
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D YQ +I Y +TG ++ R+ L+ NI I +L +
Sbjct: 453 SGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELK----RPDNIPRDTAIAILARAGRIEE 508
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
A F++ DI V MI ++K + N E+ E+ R G P++
Sbjct: 509 ATWVFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDS 560
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 110/238 (46%), Gaps = 14/238 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M + + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 406 EKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTM 465
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D +I AG E+A ++ +
Sbjct: 466 IVAYERTGLVAHAKRLLHELKRPDNIPRDTAI-----AILARAGRIEEATWVFRQAFDAR 520
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
+D+S + +I L+ + + V ++ +R FP++ I+ + + L++
Sbjct: 521 EVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALV--LNAFGKLREFDK 578
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A+ +++ E GC D V M+ Y E L E+ ++PN E+
Sbjct: 579 ADALYRQMHEEGCVFPD-EVHFQMLSLYGARKDFVMVESLFEKL---DSNPNINKKEL 632
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 88/224 (39%), Gaps = 36/224 (16%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
P + YNV +R + A + +EM++ G ++ D T+S L + + + GLF+ +
Sbjct: 142 PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKG-LSPDRYTYSTLITCFGKHGLFDSSLF 200
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--------LAFPNTAN--- 162
L+++E N DL Y LI L + + S+ I+ L+ +A+ + N
Sbjct: 201 WLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFG 260
Query: 163 ------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+SY ++ + V+ + A F E D+
Sbjct: 261 KAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLT 320
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
N+MI Y + + A+ L R+ G PN ++ Y
Sbjct: 321 TCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVY 364
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 115/292 (39%), Gaps = 11/292 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +L +M E N ++ +Y + P++ + M+ I P+ +YN +
Sbjct: 302 EALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLL 361
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R D+ G + + + V + T++ + +IY + EKA ++E+ R
Sbjct: 362 RVYGEA-DLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGI 420
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y +I+++ + G L +++ LR + + Y MI + A++
Sbjct: 421 EPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKR 480
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E + D + I A+ GR+E A + +A + + + +
Sbjct: 481 LLHELKRP----DNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFS 536
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
+N V+ EK + G + P S+ I + F + ++ D A+
Sbjct: 537 KNKKYANVVEVFEKMREVG------YFPDSDVIALVLNAFGKLREFDKADAL 582
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 142/356 (39%), Gaps = 43/356 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
++A E+MKE S + +N ++ LY K G E I + +EMKA I PD YTYN
Sbjct: 134 KEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNT 193
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-- 119
+ A A+ + A + +MK D T++ L +Y +AG + +A LKE+E
Sbjct: 194 AITACASGSLCEEATELFTQMK-SSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESA 252
Query: 120 ---------------------------------NRNAHRDLSAYQFLITLYGQTGNLSEV 146
++ D+ Y L++ Y + G + +
Sbjct: 253 GCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQA 312
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
I+ +R + + ++ +I + K+ F++ ++ DI N ++GA
Sbjct: 313 MEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGA 372
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
+ K G ++ ++ G +P+ T+ I + Y R G A+ + + G
Sbjct: 373 FGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAG---- 428
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P T T + +E + AE L+ L ++ + ++ YA G
Sbjct: 429 --CTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGG 482
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 148/361 (40%), Gaps = 50/361 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A L +MK N + +N+L+ +Y K G + +++EM+++ +P+ TYN
Sbjct: 203 LCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYN 262
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A + + M G + D T+++L S Y AG E+A ++
Sbjct: 263 ELLSAFGRAGLCNAAAEMKDSMVSKG-IEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRT 321
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRI---------------WRSLRLAFPNTANISY 165
N + + LI ++G+ N SE+ I W SL AF N Y
Sbjct: 322 SNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGK--NGMY 379
Query: 166 LNMIQVLVNLKD-------------LPGAEKCFKE----------WESGCATYDIRVTNV 202
+++V +K + +C ++GC T D+ N
Sbjct: 380 SEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGC-TPDLATFNT 438
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++ A A+EGR E+AE + + R PN + Y G+++ L++ +DT
Sbjct: 439 LLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEK----LKEMVDTL 494
Query: 263 RGDGGKWVPSSET-IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
+VP ++ ++TF+ + + VD AE ++ F +I Y
Sbjct: 495 H---TIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKK 551
Query: 322 G 322
G
Sbjct: 552 G 552
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA ++ L + +N LM +Y + G K A ++E A+ PD +YN
Sbjct: 553 MMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYN 612
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + +S A R+ EM +G + D T++ YV G+F +A +K +
Sbjct: 613 TVIFSYSKHGQLSSATRIFHEMVSNG-IQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHK 671
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 165
D Y+ L+ Y + G EV RI + ++ + PN + +Y
Sbjct: 672 TGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAY 716
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 1/239 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ E M+ + + +NSL+ + K G ++ + + MK + PD T+N+ + A
Sbjct: 350 IFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYG 409
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A + + M + G D TF+ L + G +E AE L EL + +
Sbjct: 410 RCGSSDQALSIYDGMLQAG-CTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPND 468
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
AY ++ Y G L ++ + +L + I + V + AE F
Sbjct: 469 IAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLA 528
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
D N MI Y K+G ++ A + R G +P+ T+ Y R G
Sbjct: 529 MRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREG 587
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 97/244 (39%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE +L+++ + + + + S++ YA G EK+ ++ + + +
Sbjct: 450 EHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTF 509
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + + AE M+ G ++ D +TF+ + S+Y + G+ +KA L +
Sbjct: 510 VLVYSKCSLVDEAEDAFLAMRHHGYLS-DTSTFNAMISMYGKKGMMDKATDTFALLRSTG 568
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y L+ +YG+ G + R A +SY +I L A
Sbjct: 569 LEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSAT 628
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F E S D N +G Y G A + + + G P+ T+ D Y
Sbjct: 629 RIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAY 688
Query: 243 LRNG 246
+ G
Sbjct: 689 CKIG 692
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 112/279 (40%), Gaps = 7/279 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+L+ A+ G E I+ E+ SS P+ Y + A A ++ + +++ +
Sbjct: 436 FNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLH 495
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
V +Y + L ++AE A + + D S + +I++YG+ G +
Sbjct: 496 TI-YVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMM 554
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + LR ++Y ++ + E +E + T D+ N +
Sbjct: 555 DKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTV 614
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I +Y+K G+L +A + G P++ T+ F Y+ G A+ ++ TG
Sbjct: 615 IFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTG- 673
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
P T RT + + + + E L+ +K +
Sbjct: 674 -----CKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M K EA L + + +N+++ Y+K G I EM ++ I PDS+TYN
Sbjct: 588 MYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYN 647
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ A V++ M + G D T+ L Y + G FE+ ER LK +++
Sbjct: 648 TFVGCYVNGGMFPEALSVVKHMHKTG-CKPDEVTYRTLVDAYCKIGKFEEVERILKFIKS 706
Query: 121 RNAHRDLSAYQ 131
+ + +AY+
Sbjct: 707 SDPNFSKAAYR 717
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 100/248 (40%), Gaps = 20/248 (8%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L + ++E + SL++ ++ ++ ++MK + P TYNV
Sbjct: 104 LFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNV------ 157
Query: 68 AVNDISGAE--------RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ D+ G + + EEMK G + D T++ + L E+A +++
Sbjct: 158 -IIDLYGKKGRSWENILELFEEMKAQG-IQPDEYTYNTAITACASGSLCEEATELFTQMK 215
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKD 177
+ N D Y L+ +YG+ G +E + + + A PN ++Y ++
Sbjct: 216 SSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNI--VTYNELLSAFGRAGL 273
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A + S D+ ++ AY++ G++E A E+ + R PN+ T+
Sbjct: 274 CNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNA 333
Query: 238 FSDYYLRN 245
+ +N
Sbjct: 334 LIGMHGKN 341
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 121/276 (43%), Gaps = 10/276 (3%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+P +L+ + + G K I++ ++ S +PD TYNV + +I+ A V++
Sbjct: 138 IPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR 197
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M V+ D T++ + ++G ++A L + R+ + D+ Y LI +
Sbjct: 198 MS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+ + ++ +R ++Y ++ + L A K + S ++ N
Sbjct: 254 GVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+++ + GR +AE+L R+G P+ T+ I ++ R G + A+D LEK
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH 373
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
G P+S + + F +EK +D A +LE
Sbjct: 374 G------CQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 115/294 (39%), Gaps = 36/294 (12%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL++M++ + +N L+ K G ++ + +M +S P+ T+N+ +
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF--------------- 108
R++ + AE+++ +M R G + TF+ L + GL
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC 375
Query: 109 -----------------EKAERALKELE---NRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
+K +RA++ LE +R + D+ Y ++T + G + +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
I L + I+Y +I L A K E + D + ++G +
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+EG+++ A + R G PNA T+ + A+D L I+ G
Sbjct: 496 REGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRG 549
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 105/242 (43%), Gaps = 7/242 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+++ +G ++ ++ M PD TY + + A + + A ++++EM
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM- 265
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
RD D T++ L + + G ++A + L ++ + ++ + ++ TG
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 144 SEVYRIWRS-LRLAFPNTANISYLNMIQVLVNLKDLPG--AEKCFKEWESGCATYDIRVT 200
+ ++ LR F + ++ N++ + K L G + K + GC +
Sbjct: 326 MDAEKLLADMLRKGF--SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSY- 382
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N ++ + KE +++ A E ER RG P+ T+ ++G ++ AV+ L +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 261 TG 262
G
Sbjct: 443 KG 444
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A +L ++ + +N+++ AK G K ++ EM+A + PD+ TY+
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L+ + A + E +R G V + TF+++ + ++A L + NR
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMG-VRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRG 549
Query: 123 AHRDLSAYQFLI 134
++Y LI
Sbjct: 550 CKPTETSYTILI 561
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LE+M + +N+++T K G E I+ ++ + P TYN
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ LA A ++++EM R + D T+S+L G ++A + E E
Sbjct: 456 IDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 1/236 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L ++M+E S+ + +++ +Y K G E ++++M ++ PD YT N
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSL 195
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A++ A + E MK+ G VA + +F+ + +AG A + + E+E R
Sbjct: 196 ITAVSRTGRTELACEIFERMKKSG-VAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARG 254
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + LI G+ SE Y++ + +R A +Y MI+ ++ A
Sbjct: 255 IKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAF 314
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ F + E + ++ N++I A K GR ++A ++ +++G P+A T +
Sbjct: 315 EMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVL 370
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 40/283 (14%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L+KM + L ++ +N ++ K ++ + MK+ D YTY + +R+L
Sbjct: 71 FLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLG 130
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A + +EM+ G ++N+ IY +AG E A LK++ ++N D
Sbjct: 131 RCKRDEEATLLFDEMEERG-CTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDD 189
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLR-------------------------LAF----- 157
LIT +TG I+ ++ LA+
Sbjct: 190 YTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDE 249
Query: 158 -------PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
PN+ I++ +I L K A K +E S T D+ MI A+AK
Sbjct: 250 MEARGIKPNS--ITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKA 307
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
G + A E+ + G N T+ + D ++ G + A D
Sbjct: 308 GNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARD 350
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A + E+MK+ + +++ FN+++ K G + EM+A I P+S T+N
Sbjct: 205 TELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNT 264
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L S A +V++EM+ G + D T++ + + +AG KA ++E
Sbjct: 265 LINCLGRAKYASEAYKVLQEMRSAG-LTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKA 323
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
++ Y LI + G + I+ ++
Sbjct: 324 GCSANVVTYNLLIDALVKAGRYQDARDIYFDMK 356
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 132/333 (39%), Gaps = 7/333 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L +++ + + N+++ Y ++ K+ QE+ P++YTY +++L
Sbjct: 1 MLAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLV 60
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ A +++M + G + D ++ + +A + ++A + +++ D
Sbjct: 61 KAGNVVLAMDFLDKMIKTG-LEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADD 119
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI G+ E ++ + + +Y N+I + + A K+
Sbjct: 120 YTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKK 179
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
D N +I A ++ GR E A E+ ER ++ G N ++ D + G
Sbjct: 180 MLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGK 239
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
+ LA + +D G K P+S T T + + K A L+ ++ A
Sbjct: 240 VGLAY----QFMDEMEARGIK--PNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPD 293
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 340
V + +I +A AG MEK S
Sbjct: 294 VFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCS 326
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 15/295 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+AEA+ E+M++ L + +N+L+ Y K G ++ EM+ S ++P+ TY++
Sbjct: 322 TEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSL 381
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V++EM+ V + FS + + Y + G ++K + L+E+E+
Sbjct: 382 LIDAYGNAERWESARIVLKEMEA-SNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDS 440
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y LI +G+ L + + I++ ++ A
Sbjct: 441 GVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRA 500
Query: 182 EKCFKE-WESG---CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
E+ F+E E G C T N+MI ++ + R ++ + L R +G PNA T+
Sbjct: 501 EELFEEMMEKGYLPCNT----TFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTT 556
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
D Y ++G A++CL D + G K PSS + + Q D A
Sbjct: 557 LIDIYGKSGRFDDAIECL----DDMKAAGLK--PSSTMYNALLNAYAQRGLSDQA 605
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 7/291 (2%)
Query: 32 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 91
G E+ AI +EM+ + + P + YN +R + AE V+ EM+R G V +
Sbjct: 317 GNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSG-VLPN 375
Query: 92 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
T+S L Y A +E A LKE+E N + + ++ Y G + +++ R
Sbjct: 376 EQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLR 435
Query: 152 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
+ + I Y +I L A F S D N ++ + K G
Sbjct: 436 EMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAG 495
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 271
+ + AEEL E +G P T+ I + + GD + D ++ + R G +P
Sbjct: 496 KHDRAEELFEEMMEKGYLPCNTTFNIMINSF---GDQE-RWDDVKNLLTNMRSQG--LLP 549
Query: 272 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
++ T T + + + D A L+ +K A ++ L+ YA G
Sbjct: 550 NAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRG 600
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 7/240 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A++ +++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 152 AYAVVSWLQKHNLCFSYELLYSI--LIHALGQSEKLYEAFLLSQKQNLTP--LTYNALIS 207
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA--ERALKELENRN 122
A A NDI A +I M+ DG +D +S + ++ + ++ +E++
Sbjct: 208 ACARNNDIEKALNLICRMREDG-YPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDK 266
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + +I + + G+L + ++ + + + + +I L N AE
Sbjct: 267 LEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAE 326
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E R N ++ Y K G L +AE + R G PN +T+ + D Y
Sbjct: 327 AIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAY 386
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 82/192 (42%), Gaps = 2/192 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L E+M E + FN ++ + + + ++ M++ ++P++ TY
Sbjct: 498 DRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTL 557
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +++MK G + T ++ L + Y + GL ++A A + +
Sbjct: 558 IDIYGKSGRFDDAIECLDDMKAAG-LKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDG 616
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L A LI +G+ E + + + ++ ++Y +++ L+ ++
Sbjct: 617 LKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVP 676
Query: 183 KCFKEW-ESGCA 193
++E SGC
Sbjct: 677 SVYEEMILSGCT 688
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++++A + M++ L S + NSL+ + K + ++Q MK + + PD TY
Sbjct: 601 LSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYT 660
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG 86
M+AL V V EEM G
Sbjct: 661 TLMKALILVEKFDKVPSVYEEMILSG 686
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 1/236 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L ++M+E S+ + +++ +Y K G E ++++M ++ PD YT N
Sbjct: 136 EEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSL 195
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A++ A + E MK+ G VA + +F+ + +AG A + + E+E R
Sbjct: 196 ITAVSRTGRTELACEIFERMKKSG-VAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARG 254
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + LI G+ SE Y++ + +R A +Y MI+ ++ A
Sbjct: 255 IKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAF 314
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ F + E + ++ N++I A K GR ++A ++ +++G P+A T +
Sbjct: 315 EMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVL 370
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 109/283 (38%), Gaps = 40/283 (14%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL+KM + L ++ N ++ K ++ + MK+ D YTY + +R+L
Sbjct: 71 LLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLG 130
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A + +EM+ G ++N+ IY +AG E A LK++ ++N D
Sbjct: 131 RCKRDEEATLLFDEMEERG-CTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDD 189
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLR-------------------------LAF----- 157
LIT +TG I+ ++ LA+
Sbjct: 190 YTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDE 249
Query: 158 -------PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
PN+ I++ +I L K A K +E S T D+ MI A+AK
Sbjct: 250 MEARGIKPNS--ITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKA 307
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
G + A E+ + G N T+ + D ++ G + A D
Sbjct: 308 GNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARD 350
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A + E+MK+ + +++ FN+++ K G + EM+A I P+S T+N
Sbjct: 205 TELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNT 264
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L S A +V++EM+ G + D T++ + + +AG KA ++E
Sbjct: 265 LINCLGRAKYASEAYKVLQEMRSAG-LTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKA 323
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
++ Y LI + G + I+ ++
Sbjct: 324 GCSANVVTYNLLIDALVKAGRYQDARDIYFDMK 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 132/333 (39%), Gaps = 7/333 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L +++ + + N+++ Y ++ K+ QE+ P++YTY +++L
Sbjct: 1 MLAAIQDTPCRYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLV 60
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ A ++++M + G + D + + +A + ++A + +++ D
Sbjct: 61 KAGNVVLAMELLDKMIKTG-LEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPADD 119
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI G+ E ++ + + +Y N+I + + A K+
Sbjct: 120 YTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKK 179
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
D N +I A ++ GR E A E+ ER ++ G N ++ D + G
Sbjct: 180 MLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGK 239
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
+ LA + +D G K P+S T T + + K A L+ ++ A
Sbjct: 240 VGLAY----QFMDEMEARGIK--PNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPD 293
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 340
V + +I +A AG MEK S
Sbjct: 294 VFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCS 326
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 146/339 (43%), Gaps = 11/339 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A AL++ M L + +NS++ K +K + + M S+ PD ++N+
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ V ++ A + +EM+ V D +FS L ++ G + A L+E++
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHR-YVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL 326
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPG 180
D Y +I + + G++SE R+ R + F ++ +Y ++ L L
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRV-RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLD 385
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AEK E E T D+ +I Y ++G ENA +L + R+ P+ T+ D
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
R GD+ A + + + +P+ T + ++ V+ A GFL+ +
Sbjct: 446 GMCRKGDLAKANELWDDM------HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMV 499
Query: 301 KAVDDLGVEVFEPLIRTYAAAG--RTSPVMLRRLKMEKV 337
K + + + +I+ Y +G + L++++ + V
Sbjct: 500 KKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNV 538
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 111/295 (37%), Gaps = 36/295 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A L +MK L L + + ++ + + G + + EM +PD TYN
Sbjct: 314 DHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL 373
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + + AE+++ EM+ G V D TF+ L Y G FE A + L +
Sbjct: 374 LNGLCKQHRLLDAEKLLNEMEERG-VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL-------------- 166
D+ Y LI + G+L++ +W + R PN S L
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAF 492
Query: 167 NMIQVLVNLKDLPG-------------------AEKCFKEWESGCATYDIRVTNVMIGAY 207
+ +V +LP ++ ++ D+ N +I Y
Sbjct: 493 GFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGY 552
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KE + A + + P+A T+ + + + G+M+ A + D+G
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSG 607
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 61/126 (48%), Gaps = 1/126 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NS++ Y ++G+ +K +Q+M+ ++ PD T+N + ++ GA V M+
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIME 569
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
++ V D T++ + + + E G + A R K + + D Y LI + GN
Sbjct: 570 KE-MVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNS 628
Query: 144 SEVYRI 149
+ +++
Sbjct: 629 KQAFQL 634
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 119/298 (39%), Gaps = 7/298 (2%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+L+ + ++ G P + + +S ++YT N+ + + + GA+ VI EM++
Sbjct: 126 NALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEK 185
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
V D T + L AG + A + + NR + Y ++ +
Sbjct: 186 RC-VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFD 244
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
+ ++R++ S+ +I + ++ A K +KE + T D+ + +I
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
G +++ G +++A + G P+ + + + R G M A+ ++ + G
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFG-- 362
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+P T T + ++ + AE L +++ + F LI Y G
Sbjct: 363 ----CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQG 416
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L + M + + + ++ L+ + + G E + EM +P+ TYN +
Sbjct: 455 KANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ ++ ++ +++M++D V D TF+ L Y++ A +E
Sbjct: 515 KGYCRSGNVKKGQQFLQKMRQDN-VFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
D Y +I + + GN+ + R+++ + + +Y+++I
Sbjct: 574 RPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLIN 620
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K + L+KM++ N+ + FN+L+ Y K + + M+ + PD+ TYN+
Sbjct: 523 VKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNM 582
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + ++ A RV + M G + D T+ +L + +V AG ++A + E+ +R
Sbjct: 583 IINGFSEQGNMQDAGRVFKGMGDSG-IEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHR 641
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 9/325 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS-SIMPDSYTY 59
M +A ++ ++K ++ +NS++ + + GH EK+ + EM + PD+ TY
Sbjct: 168 MVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTY 227
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + A A +N A R+ +EMK +G + ++ L IY + G E+A +KE+
Sbjct: 228 SALISAFAKLNRDDSAIRLFDEMKENG-LQPTAKIYTTLMGIYFKVGKVEEALGLVKEMR 286
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R + Y LI G++G + + Y ++++ + N+I +L L
Sbjct: 287 ARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLR 346
Query: 180 GAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A K F E + CA + ++ + + L A ER ++ G P++ T+ I
Sbjct: 347 DAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSIL 406
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
D Y + ++ A+ LE+ + G + P + + K D A +
Sbjct: 407 IDGYCKTNRVEKALLLLEEMDEKG------FPPCPAAYCSLINTLGVAKRYDVANELFQE 460
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGR 323
LK+ V+ +I+ + GR
Sbjct: 461 LKENCGCSSARVYAVMIKHFGKCGR 485
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 39/270 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++MKE L ++ + +LM +Y K G E+ +++EM+A + +TY
Sbjct: 241 DSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTEL 300
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R L + A + M +DG D +NL +I + A + E++ N
Sbjct: 301 IRGLGKSGRVEDAYMTYKNMLKDG-CKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLN 359
Query: 123 AHRDLSAYQFLI-TLYGQTGNLSE-----------------------------VYRIWRS 152
++ Y +I +L+ LSE R+ ++
Sbjct: 360 CAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKA 419
Query: 153 LRL-------AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
L L FP +Y ++I L K A + F+E + C RV VMI
Sbjct: 420 LLLLEEMDEKGFP-PCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIK 478
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTW 235
+ K GRL A L ++ G P+ +
Sbjct: 479 HFGKCGRLNEAINLFNEMKKLGCTPDVYAY 508
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +MK+L +N+LMT + ++ ++ + M+ + PD ++N+ + LA
Sbjct: 492 LFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLA 551
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
GA + +MK + + D +F+ + AGLFE+A + ++E+ ++ DL
Sbjct: 552 RTGGPKGALEMFTKMK-NSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDL 610
Query: 128 SAYQFLITLYGQTGNLSEV 146
Y ++ G+ + V
Sbjct: 611 ITYSSILEAVGKVDDCKMV 629
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 7/284 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEA+ E+M++ L + +N+L+ Y K G + ++ EM+ S + P+ TY+
Sbjct: 321 TVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSF 380
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V++EM+ V + FS + S Y + G ++K+ + L+E+EN
Sbjct: 381 LIDAYGNAGRWESARIVLKEMEA-SNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENS 439
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y +I +G+ L + + +++ +I A
Sbjct: 440 GVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRA 499
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F+E G + N+MI ++ + R ++ + L R +G PN+ T+ D
Sbjct: 500 EELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDI 559
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 285
Y ++G A++CL D + G K PSS + + Q
Sbjct: 560 YGKSGRFNDAIECL----DDMKAAGLK--PSSTMYNALINAYAQ 597
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 118/281 (41%), Gaps = 7/281 (2%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
AI +EM+ + + P + YN +R + AE V+ EM+R G V+ + T+S L
Sbjct: 326 AIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSG-VSPNEQTYSFLIDA 384
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
Y AG +E A LKE+E N + + +++ Y G + +++ R + +
Sbjct: 385 YGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPD 444
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+ Y MI L A F S D N +I + + G+ + AEEL E
Sbjct: 445 RVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFE 504
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
G P T+ I + + GD + D ++ + R G VP+S T T +
Sbjct: 505 EMMEGGYSPCNTTFNIMINSF---GDQE-RWDDVKNLLAHMRSQG--LVPNSVTYTTLID 558
Query: 282 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ + + A L+ +K A ++ LI YA G
Sbjct: 559 IYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRG 599
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 118/302 (39%), Gaps = 32/302 (10%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A++ +++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 151 AYAVVLWLQKHNLCFSYELLYSI--LIHALGQSEKLYEAFLLSQRQNLTP--LTYNALIS 206
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA--ERALKELENRN 122
A A ND+ A +I M++DG +D+ +S + + + A ++ +E+E
Sbjct: 207 ACARNNDLEKALNLITRMRQDG-YPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDK 265
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ +I + + G+LS+ ++ + + + + +I L N AE
Sbjct: 266 LELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAE 325
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E R N ++ Y K G L++AE + R G PN +T+ D Y
Sbjct: 326 AIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAY 385
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
G+ G+W E+ R ++ E A F IL
Sbjct: 386 ---------------------GNAGRW----ESARIVLKEMEASNVQPNAYVFSRILSSY 420
Query: 303 VD 304
D
Sbjct: 421 RD 422
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++E+A + M+ L S + NSL+ + + + ++Q MK + + PD TY
Sbjct: 600 LSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYT 659
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG 86
M+AL V V EEM G
Sbjct: 660 TLMKALIRVEKFDKVPSVYEEMILSG 685
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 134/301 (44%), Gaps = 11/301 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ +LE M++ N + + ++SL+ KTG + + M I P+ TYN
Sbjct: 353 QEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 412
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N + A ++EEM G D T++ L + G +A R +++ +
Sbjct: 413 IHGFCMTNGVDSALLLMEEMTATG-CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ Y LI + + + ++ + + P+ +++ +++ N +
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV--VTFSTLVEGYCNAGLVDD 529
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ +E + + D+ ++ + K GR+ A + +R +RG PN T+ D
Sbjct: 530 AERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALID 589
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ R G +A LE+ + G+G + P+ T R+ + F D++ A LE L+
Sbjct: 590 AFCRAGKPTVAYRLLEEMV----GNGVQ--PNVITYRSLIGGFCGTGDLEEARKILERLE 643
Query: 301 K 301
+
Sbjct: 644 R 644
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 134/329 (40%), Gaps = 19/329 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A LL++M+E L +++LM KTG + + ++ PD Y+
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A ++ E+M R+ D TF+ L + ++A++ L+ +E+
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
RN ++ Y LI +TG + + +++ + R PN ++Y ++I +
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV--VTYNSLIHGFCMTNGV 422
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A +E + DI N +I K GR A L + + +P+ T+
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482
Query: 239 SDYY--LRNGDM--KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 294
+ L DM L D L++A+ +P T T + + VD AE
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAV----------LPDVVTFSTLVEGYCNAGLVDDAER 532
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
LE + + V + L+ + GR
Sbjct: 533 LLEEMVASDCSPDVYTYTSLVDGFCKVGR 561
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 113/246 (45%), Gaps = 2/246 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A LL++MKE L + + +++++ + + + + ++M + MP+ TYN
Sbjct: 177 VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 236
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + A +++EM+ G + D ++ L + + G + A + ++ N
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERG-LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 295
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ D+ AY LI + G L E +++ +R +++ ++ L L A
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 355
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EIFSD 240
++ + E T ++ + +I K G++ +A+E+ +R RG +PN T+ +
Sbjct: 356 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 415
Query: 241 YYLRNG 246
+ + NG
Sbjct: 416 FCMTNG 421
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 115/294 (39%), Gaps = 7/294 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A KMK+ + +N L+ + K + +++EMK S + P+ TY+ +
Sbjct: 144 EATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 203
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ A ++ +M +G + T++ L S GL ++A L E+ R
Sbjct: 204 HGFCRQTKVDTAYKLFRQMVENG-CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D +Y L+ +TG + +++ ++Y +I L L A K
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F++ D+ ++ K RL+ A+++ E R PN T+ D
Sbjct: 323 LFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLC 382
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G ++ A + ++ I G P+ T + + F VD A +E
Sbjct: 383 KTGQVRDAQEVFKRMIVRG------IEPNVVTYNSLIHGFCMTNGVDSALLLME 430
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE LLE+M + + SL+ + K G + +++ M P+ TY
Sbjct: 526 LVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYT 585
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE- 119
+ A + A R++EEM +G V + T+ +L + G E+A + L+ LE
Sbjct: 586 ALIDAFCRAGKPTVAYRLLEEMVGNG-VQPNVITYRSLIGGFCGTGDLEEARKILERLER 644
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ N D+ AY+ ++ +TG +S + +++ + + Y+ +I+ L K+L
Sbjct: 645 DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELG 704
Query: 180 GAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
A + +E S + + +I A+EGR E A L +
Sbjct: 705 KAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALAD 747
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 99/258 (38%), Gaps = 36/258 (13%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV---------------------A 89
I P+ +TY V ++ L D+ A ++EEM+ G V A
Sbjct: 54 GITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113
Query: 90 ADW----------TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
D+ T++ + +A +A +++ + + Y LI + +
Sbjct: 114 LDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIR 198
+ Y + + ++ + ++Y +I + A K F++ E+GC ++
Sbjct: 174 VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMP-NLV 232
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
N ++ + G ++ A EL + R RG P+ +++ + G + +A+ E
Sbjct: 233 TYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFE-- 290
Query: 259 IDTGRGDGGKWVPSSETI 276
D GD V + T+
Sbjct: 291 -DNSNGDCPPDVVAYSTL 307
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 4/206 (1%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
YTYN AL I +++ G + + T++ + ++G +KA L+
Sbjct: 25 YTYNRLFEALLRARRIDETCHILKNGWPPG-ITPNVFTYAVVIQGLCKSGDLDKACELLE 83
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
E+ D + Y F+I + N ++ +RS+ I++ MI L
Sbjct: 84 EMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC---EKNVITWTIMIDGLCKAN 140
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
LP A F + + + NV+I + K ++ A L + + G PN T+
Sbjct: 141 RLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYS 200
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ R + A + ++ G
Sbjct: 201 TVIHGFCRQTKVDTAYKLFRQMVENG 226
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 133/331 (40%), Gaps = 10/331 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NSL+ K G E+ I+ +M P++ TYN + L N + A + +
Sbjct: 354 YNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLT 413
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D TF++L A +E++ + H D Y LI G L
Sbjct: 414 SKG-ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRL 472
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + + + + + ++Y +I K + AE+ F E E + ++ N +
Sbjct: 473 EEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTL 532
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I K R+E A +L ++ G P+ T+ Y+ R GD+K A D ++ G
Sbjct: 533 IDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG- 591
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
P S T T + + V+ A L ++ L + + P+I+ R
Sbjct: 592 -----CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646
Query: 324 TS-PVMLRRLKMEKVEVSEAS--KKLLEAIC 351
TS V L R MEK + +A K + +C
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGLC 677
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 5/238 (2%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
E+M S++ N L+ Y K G E++ + I EM PD +T+N + L +
Sbjct: 270 EQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRI 329
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
+ A +++ M ++G D T+++L + G E+A L ++ R+ +
Sbjct: 330 GHVKHALEILDVMLQEG-FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVT 388
Query: 130 YQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI+ + + E + R L + P+ ++ ++IQ L + A + F+E
Sbjct: 389 YNTLISTLCKENQVEEATELARVLTSKGILPDVC--TFNSLIQGLCLTNNHRLAMELFEE 446
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
++ D N++I + GRLE A L + G N T+ D + +N
Sbjct: 447 MKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKN 504
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 2/251 (0%)
Query: 13 KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 72
K+ N SS+ + ++ K G + ++QEMK + T+ + + + A
Sbjct: 97 KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELF 156
Query: 73 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
A V++ M+ + + D T++ L ++ V+ + E + +R D++ +
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESG 191
LI + + + + + ++ ++Q + ++ GA + ++ +G
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
C + ++ V NV++ Y KEGR+E + G P+ T+ + R G +K A
Sbjct: 277 CPSSNVTV-NVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHA 335
Query: 252 VDCLEKAIDTG 262
++ L+ + G
Sbjct: 336 LEILDVMLQEG 346
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 2/234 (0%)
Query: 3 EKAEALLEKMKE-LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A A+++ M+E L + +N L+ + + + + M + I PD T+N+
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++AL + I A ++EEM G ++ D TF+ L ++E G A R +++
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYG-LSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAA 275
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L+ Y + G + EV + ++ +++ L + + A
Sbjct: 276 GCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHA 335
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ DI N +I K G +E A E+ + R PN T+
Sbjct: 336 LEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTY 389
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE + ++M+ + + + +N+L+ K E+ ++ +M + PD +TYN
Sbjct: 508 EEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSL 567
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ DI A +++ M +G D T+ L +AG E A R L+ ++ +
Sbjct: 568 LTYFCRAGDIKKAADIVQTMTSNG-CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
Y +I + SE R++R +
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREM 657
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L+++M L +NSL+T + + G +K I+Q M ++ PDS TY
Sbjct: 543 EEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L+ + A R++ ++ G V A T + +++ E E A R +E+ +
Sbjct: 603 ILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE-AVRLFREMMEKG 661
Query: 123 AHRDLSAYQ 131
D Y+
Sbjct: 662 DPPDAVTYK 670
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 120/276 (43%), Gaps = 10/276 (3%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+P +L+ + + G K I++ ++ S +PD TYNV + +I+ A V++
Sbjct: 138 IPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR 197
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M V+ D T++ + ++G ++A L + R+ + D+ Y LI +
Sbjct: 198 MS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+ ++ +R ++Y ++ + L A K + S ++ N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+++ + GR +AE+L R+G P+ T+ I ++ R G + A+D LEK
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
G P+S + + F +EK +D A +LE
Sbjct: 374 G------CQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 106/266 (39%), Gaps = 36/266 (13%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL++M++ + +N L+ K G ++ + +M +S P+ T+N+ +R
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF---------------- 108
++ + AE+++ +M R G + TF+ L + GL
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKG-FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 109 ----------------EKAERALKELE---NRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
+K +RA++ LE +R + D+ Y ++T + G + + I
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
L + I+Y +I L A K E + D + ++G ++
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 210 EGRLENAEELKERARRRGADPNAKTW 235
EG+++ A + R G PNA T+
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTF 522
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 105/242 (43%), Gaps = 7/242 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+++ +G ++ ++ M PD TY + + A + + A ++++EM
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM- 265
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
RD D T++ L + + G ++A + L ++ + ++ + ++ TG
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 144 SEVYRIWRS-LRLAFPNTANISYLNMIQVLVNLKDLPG--AEKCFKEWESGCATYDIRVT 200
+ ++ LR F + ++ N++ + K L G + K + GC +
Sbjct: 326 MDAEKLLADMLRKGF--SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY- 382
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N ++ + KE +++ A E ER RG P+ T+ ++G ++ AV+ L +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 261 TG 262
G
Sbjct: 443 KG 444
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +LEKM + +S+ +N L+ + K ++ ++ M + PD TYN +
Sbjct: 362 RAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
AL + A ++ ++ G + T++ + +AG KA + L E+ ++
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWR 151
D Y L+ + G + E + +
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFH 508
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A +L ++ + +N+++ AK G K ++ EM+A + PD+ TY+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L+ + A + E +R G + + TF+++ ++ ++A L + NR
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 122 NAHRDLSAYQFLI 134
+ ++Y LI
Sbjct: 549 GCKPNETSYTILI 561
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LE+M + +N+++T K G E I+ ++ + P TYN
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ LA A ++++EM R + D T+S+L G ++A + E E
Sbjct: 456 IDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 5/262 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E A+ LL +M + +N+ + K G + + +EM + + P+ TY+
Sbjct: 334 MWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYS 393
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
M A N + A + EEMK V D +++ L IY + G ++A KE+E
Sbjct: 394 AMMDGYAKANLLEDALNLYEEMKLRS-VCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMER 452
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
+RD+ Y L++ YG+ G EV R++ + R +PNT ++Y MI + +
Sbjct: 453 SGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNT--LTYSTMIDMYTKGEMF 510
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A ++E++ D+ + +I K G +E++ L +G PN T+
Sbjct: 511 QEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSI 570
Query: 239 SDYYLRNGDMKLAVDCLEKAID 260
D ++ ++ V+ AID
Sbjct: 571 IDASQQSPTLEYGVNGSSDAID 592
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 5/210 (2%)
Query: 46 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-VAADWTTFSNLASIYVE 104
EM A+ +MPD TYN + A+ A++++ EM D R + D T++ +
Sbjct: 309 EMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEM--DHRCIVPDVFTYNTYLDTLCK 366
Query: 105 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 164
AG + A R +E+ ++ ++ Y ++ Y + L + ++ ++L +S
Sbjct: 367 AGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVS 426
Query: 165 YLNMIQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
Y ++ + L +L A EKC KE E D+ N ++ Y K G + L E
Sbjct: 427 YNTLVGIYEKLGNLDEAIEKC-KEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEM 485
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
+ R PN T+ D Y + + A+D
Sbjct: 486 KARNIYPNTLTYSTMIDMYTKGEMFQEAMD 515
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 18/320 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT A + E+M NL LM K G + + + M ++P+ Y YN
Sbjct: 145 MTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYN 204
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + D+ AE ++ EM+ G V D T++ L ++Y + GL +A ++E
Sbjct: 205 CLIHACSKSRDVERAEFILNEMEVKG-VVPDIFTYNTLIALYCKKGLHYEALSVQDKMER 263
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ +Y LI + + G + E R++ ++ A PN +++Y +I +
Sbjct: 264 EGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDAIPN--HVTYTTLIDGYCKANEFEE 321
Query: 181 AEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + +E Y VT N ++ +GR+ +A +L R ++ T
Sbjct: 322 ALR-LREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLI 380
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ Y + GD+ A+ K ++ G P+S T + + F + +++ A+ E+L
Sbjct: 381 NAYCKIGDLNSALKFKTKMLEAG------LTPNSFTYKALIHGFCKTSELESAK---ELL 431
Query: 300 KKAVDDLGVEVFEPLIRTYA 319
+D F P RTY+
Sbjct: 432 FGMLD----AGFSPNYRTYS 447
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 93/245 (37%), Gaps = 17/245 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L E M L + +NS++ G ++ EM + DS T N
Sbjct: 320 EEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTL 379
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + D++ A + +M G + + T+ L + + E A+ L + +
Sbjct: 380 INAYCKIGDLNSALKFKTKMLEAG-LTPNSFTYKALIHGFCKTSELESAKELLFGMLDAG 438
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN-------TANIS-YLNMIQVLVN 174
+ Y +++ Y + N V LA P+ NIS Y +I+ L
Sbjct: 439 FSPNYRTYSWIVDSYCKKDNTDAV--------LALPDEFLSKGFCLNISLYRALIRRLCK 490
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
++ + AEK E + D + + +Y K G A ++ E RR K
Sbjct: 491 IERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKI 550
Query: 235 WEIFS 239
+ FS
Sbjct: 551 YRCFS 555
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
KM+EL+L S +N L+ L++ G + I I+ +MK + P + TYN+ ++ A +
Sbjct: 175 KMRELSLPISPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEH 234
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
+I G RV +MKR +V + T+ LA + A L+ + ++ +EN + S
Sbjct: 235 NIDGVARVFNDMKR-AKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTNWSTL 293
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
+ L+ LYG G E+ W L P+ S++ I+ + + AE+ + ++ES
Sbjct: 294 EILLILYGYHGKAKELKMTW-DLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFES 352
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
N ++ Y + G ++ A + + R G
Sbjct: 353 TRKPKLTEQFNSILSVYCRHGLVDKASAVFKEMRANGC 390
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 121/278 (43%), Gaps = 10/278 (3%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+P SL+ + + G +K +++ ++ S +PD TYNV + +I A +V++
Sbjct: 93 IPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDR 152
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M VA D T++ + ++G ++A L + + D+ Y LI +
Sbjct: 153 MN----VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 208
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+ + ++ +R ++Y +I + L A K S ++ N
Sbjct: 209 GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHN 268
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+++ + GR +AE+L R+G P+ T+ I ++ R G + A+D LEK
Sbjct: 269 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 328
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
G P+S + + F +EK +D A +L+I+
Sbjct: 329 G------CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 123/297 (41%), Gaps = 15/297 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL++M+ + +N L+ K G ++ + M + P+ T+N+ +
Sbjct: 212 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 271
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R++ + AE+++ +M R G + TF+ L + GL +A L+++
Sbjct: 272 RSMCSTGRWMDAEKLLSDMLRKG-CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 330
Query: 124 HRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y L+ + + + E I S R +P+ ++Y ++ L +
Sbjct: 331 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS-RGCYPDI--VTYNTLLTALCKDGKVDV 387
Query: 181 AEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + + S GC+ I N +I +K G+ E A +L + RR+G P+ T+
Sbjct: 388 AVEILNQLSSKGCSPVLI-TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 446
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
R G + A+ +G P++ T + M + + D A FL
Sbjct: 447 SGLSREGKVDEAIKFFHDL------EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 497
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/254 (15%), Positives = 105/254 (41%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+ + +N+ + +N+++ +G ++ ++ PD TY + + A
Sbjct: 147 LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 206
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+ + A ++++EM+ G D T++ L + + G ++A + L + + ++
Sbjct: 207 ESGVGQAMKLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 265
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+ ++ TG + ++ + + + +++ +I L L A ++
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
T + N ++ + KE +++ A E + RG P+ T+ ++G +
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385
Query: 249 KLAVDCLEKAIDTG 262
+AV+ L + G
Sbjct: 386 DVAVEILNQLSSKG 399
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 2/233 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L ++M+EL + F +L+ +AK G + +++ EMK+SS+ D YNV + +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
V + A + E++ +G + D T++++ + +A ++A + LE
Sbjct: 250 KVGKVDMAWKFFHEIEANG-LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
AY +I YG G E Y + R + I+Y ++ L + + A K F+E
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ A ++ N++I + G+L+ A EL++ ++ G PN +T I D
Sbjct: 369 MKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 111/255 (43%), Gaps = 1/255 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A + EKM + + +S+ + SL+ + G E I ++M + PD N
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+M + + + EE+K R D ++S L ++AG + ++ +
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D AY +I + + G +++ Y++ ++ ++Y ++I L + L A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E +S ++ + + +I + K GR++ A + E ++G PN TW D
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 242 YLRNGDMKLAVDCLE 256
++ ++ A+ C +
Sbjct: 702 LVKAEEINEALVCFQ 716
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 123/286 (43%), Gaps = 6/286 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A +LL++MK +L + +N + + K G + E++A+ + PD TY
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L N + A + E ++++ RV + ++ + Y AG F++A L+ +
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPG 180
+ + AY ++T + G + E +++ ++ A PN + +Y +I +L L
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLS--TYNILIDMLCRAGKLDT 395
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + + ++R N+M+ K +L+ A + E + P+ T+ D
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 286
+ G + A EK +D+ + + I+ F H +E
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNS--IVYTSLIKNFFNHGRKE 499
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 8/259 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA LLE+MK + + + S++ AK ++ + +E K+ I + Y+ +
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V I A ++EE+ + G + + T+++L V+A +A + ++
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKG-LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI + ++ + W+ ++ + ISY MI L ++ A
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F +++ D N MI + R +A L E RRRG + KT + D
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLH 843
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+N DCLE+A G
Sbjct: 844 KN-------DCLEQAAIVG 855
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 1/193 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++Q M+ P Y + A +AVN + ++M+ G F+ L +
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG-YEPTVHLFTTLIRGF 213
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+ G + A L E+++ + D+ Y I +G+ G + ++ + +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +MI VL L A + F+ E N MI Y G+ + A L ER
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 223 ARRRGADPNAKTW 235
R +G+ P+ +
Sbjct: 334 QRAKGSIPSVIAY 346
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 122/305 (40%), Gaps = 7/305 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A+ + ++M+ + F +L+ A+ G EK I ++M+ + PD Y YN
Sbjct: 276 SHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNA 335
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M + + GA + M+ G D +++ + Y AGL E A+ +E++
Sbjct: 336 LMESYSRAGFPYGAAEIFSLMQHMG-CEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRI 394
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ ++ L++ Y GN+++ I + + +M+ + L
Sbjct: 395 GITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKM 454
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F + G DI N++I Y + G +E EEL + + +P+ TW
Sbjct: 455 EDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGA 514
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y R K ++ EK ID G P T + + E+ ++ + + K
Sbjct: 515 YSRKKLYKRCLELFEKMIDAG------CYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHK 568
Query: 302 AVDDL 306
+ L
Sbjct: 569 DLKTL 573
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 122/322 (37%), Gaps = 42/322 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAEA+ +M++ L S++ +N+ + K G+ K I MK P + TY
Sbjct: 205 LLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYT 264
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A+ + +EM R R + TF+ L + GL EKAE ++++
Sbjct: 265 MLINVYGKESKSHMAQNIFDEM-RTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQE 323
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ AY L+ Y + G FP G
Sbjct: 324 AGYEPDVYAYNALMESYSRAG---------------FPY--------------------G 348
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F + D N+M+ AY + G E+A+ + E +R G P K+ +
Sbjct: 349 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLS 408
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y G++ D + + +G P + + + + + + E ++
Sbjct: 409 AYSSAGNVAKCEDIIGQMHKSG------LKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQ 462
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
K + + LI Y AG
Sbjct: 463 KGPCRADISTYNILINVYGRAG 484
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 77/200 (38%), Gaps = 1/200 (0%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 106
M S+ PD YN+ M A + E E+ + + T++ L Y ++G
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTE-DTYALLLKAYCKSG 204
Query: 107 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 166
L EKAE E+ Y I + GN + I+ ++ +Y
Sbjct: 205 LLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYT 264
Query: 167 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 226
+I V A+ F E + +I ++ A A+EG E AEE+ E+ +
Sbjct: 265 MLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEA 324
Query: 227 GADPNAKTWEIFSDYYLRNG 246
G +P+ + + Y R G
Sbjct: 325 GYEPDVYAYNALMESYSRAG 344
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 7/285 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL M E L F + +N+L++ K G ++ + +EM I PD YT+N+ + L
Sbjct: 523 LLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLC 582
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ I A R+ E K++G V + T+ + Y +A E+ E L EL ++ +
Sbjct: 583 NADKIDEASRLWHECKKNGYVPNVY-TYGVMIDGYCKANKVEEGENLLNELVSKKLELNS 641
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI Y GN++ +R+ ++ + +Y +++ L N+ + A+ E
Sbjct: 642 VVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDE 701
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
++ +IG Y+K G++ + + PN T+ I D + + G
Sbjct: 702 MRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGK 761
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
K A L + + G +P + T F +E V+ A
Sbjct: 762 TKEAAKLLNEMTEKG------ILPDAVTYNAFTNGLCKEGKVEEA 800
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 150/354 (42%), Gaps = 14/354 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++M EL + + +N+L+ Y K G+ + I +M + I P+S T N
Sbjct: 343 DEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSL 402
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + I AE V+EEM G + + +FS + + F A ++E+ RN
Sbjct: 403 IQGFCKSDQIGQAENVLEEMIGRG-LPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPG 180
+ L++ + G E +W R L F PN + L I L ++
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNAL--IHGLCKAGNMQE 519
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
K ++ +D N +I KEG+++ ELKE ++G P+ T+ +
Sbjct: 520 TLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLL- 578
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ L N D +D + + +G +VP+ T + + + V+ E L L
Sbjct: 579 HGLCNAD---KIDEASRLWHECKKNG--YVPNVYTYGVMIDGYCKANKVEEGENLLNELV 633
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRR--LKMEKVEVSEAS-KKLLEAIC 351
+L V+ LIR Y G + R +K V +S A+ L+ +C
Sbjct: 634 SKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLC 687
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+ E LL ++ L +S+ +NSL+ Y G+ + +MK+ ++ TY+
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M L + + A+ +++EM+++G + + ++ + Y + G K L+E+ +
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEG-LLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSH 740
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
N H + Y +I + + G E ++ +
Sbjct: 741 NIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEM 772
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A+ LL++M++ L + + + +++ Y+K G K+ ++QEM + +I P+ +TY
Sbjct: 691 LVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYT 750
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A +++ EM G + D T++ + + G E+A + E+ +
Sbjct: 751 IMIDGFCKLGKTKEAAKLLNEMTEKG-ILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSS 809
Query: 121 RNAHRDLSAYQFLI 134
D Y LI
Sbjct: 810 GAVCLDEITYTTLI 823
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 25/255 (9%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
+ K L GF++ F +L AK G + P T + +L N
Sbjct: 196 QFKHLGFGFAADVF----SLLAKKG----------------LFPSLKTCTFLLSSLVKAN 235
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
++ + V + + G + D FS + + + + + A ++E ++ Y
Sbjct: 236 ELKKSYEVYDFICLGG-IIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTY 294
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-E 189
+I ++G L E YR + + + I+Y I L+ L+ + A KE E
Sbjct: 295 NNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSE 354
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
G ++ V N +I Y K G + A ++++ +G PN+ T + ++ +
Sbjct: 355 LGFVPNEV-VYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIG 413
Query: 250 LAVDCLEKAIDTGRG 264
A + LE+ I GRG
Sbjct: 414 QAENVLEEMI--GRG 426
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 2/267 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A+ + ++M+ + F +L+ A+ G EK I ++M+ + PD Y YN
Sbjct: 12 SHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNA 71
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M + + GA + M+ G D +++ + Y AGL E A+ +E++
Sbjct: 72 LMESYSRAGFPYGAAEIFSLMQHMG-CEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRI 130
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ ++ L++ Y GN+++ I + + +M+ + L
Sbjct: 131 GITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKM 190
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E F + G DI N++I Y + G +E EEL + + +P+ TW
Sbjct: 191 EDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGA 250
Query: 242 YLRNGDMKLAVDCLEKAIDTG-RGDGG 267
Y R K ++ EK ID G DGG
Sbjct: 251 YSRKKLYKRCLELFEKMIDAGCYPDGG 277
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ + ++M E L + +N+L+ K+G E+ + ++M PD+YTYN
Sbjct: 504 EEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFL 563
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ LA + RV+ E K G V + T++ + Y A + A +L
Sbjct: 564 MKGLADKGKMDDVGRVLHEAKDHG-VVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNK 622
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
Y LI + + GN +E +++ ++R + + +Y ++I + + A+
Sbjct: 623 VELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAK 682
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E + ++ +IG Y K G+++ E + + PN T+ I D Y
Sbjct: 683 GIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGY 742
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G+ K A L + I G
Sbjct: 743 CKMGNTKEATKLLNEMIANG 762
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 131/323 (40%), Gaps = 12/323 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++L +M + FN+L+ Y++ G+ + + +M + P++ T+N
Sbjct: 328 DEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTL 387
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ N + AE+V+E + + ++ + S + + ++ F+ A + +K L RN
Sbjct: 388 LQGFCRTNQMEQAEQVLEYLLSN-VLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRN 446
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ S L+ + G E +W L AN + N +L L + E
Sbjct: 447 IKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSN--ALLYGLCERGNME 504
Query: 183 KCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
+ F KE D N +I K G++E A +LKE+ ++G P+ T+
Sbjct: 505 EVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLM 564
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
G M L +A D G VP+ T + + +D A L
Sbjct: 565 KGLADKGKMDDVGRVLHEAKDHG------VVPNIYTYALMLEGYCNADRIDNAVSLFNKL 618
Query: 300 KKAVDDLGVEVFEPLIRTYAAAG 322
+L V+ LI ++ AG
Sbjct: 619 VYNKVELSYVVYNILIAAHSKAG 641
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A+ + E+M+ L + + +L+ Y K G ++I +I+QEM ++ I P+ TY
Sbjct: 677 LVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYT 736
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 104
+ + + + A +++ EM +G ++ D T++ L Y +
Sbjct: 737 IMIDGYCKMGNTKEATKLLNEMIANG-ISPDTVTYTVLQKGYCK 779
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 164/360 (45%), Gaps = 17/360 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A+ K KE L + + F+ L LY + G K+ + ++++A+ + P N
Sbjct: 194 MILHADDFYYKFKEAKLKPNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLN 253
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGR--VAADWTTFSNLASIYVEAGLFEKAERAL--- 115
M + ++ IS AE + ++ G + +T+S +A+ Y+ AG+ +KA+ L
Sbjct: 254 NLMVSKYELHGISSAEEIFNQLVPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVI 313
Query: 116 -KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
K ++ + + Y LI++Y N + R+W+ + + Y+ MI+
Sbjct: 314 EKAMDQGSFPKLRRTYHILISMYSTMKNRDGMERVWKKI----EDLKAQDYVAMIESCGR 369
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
++ AEK FKE + + ++G YA +G+ + AE+L ++ + + +A
Sbjct: 370 ADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALC 429
Query: 235 WE--IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK-DVDG 291
+ I ++ RN D AV+ LE A G D G+ P T ++ +E DV
Sbjct: 430 YHYIILANLNARNIDR--AVEILELAEAAGMRD-GRSRPFLGTFCDVLKTIARETGDVAL 486
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR-TSPVMLRRLKMEKVEVSEASKKLLEAI 350
AE L +K + V+ L+R Y AG+ L+RL ++ + + +LL+ +
Sbjct: 487 AETLLADWRKGKYRTDIAVYNHLLRVYLKAGKQVQGPFLKRLAGNNMKPTRETHQLLQQL 546
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 144/351 (41%), Gaps = 11/351 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L +++K S N L ++Y + ++ + +E + + D YN+ +
Sbjct: 784 RAERLFKELKATGTISSCYSLNLLASMYRQLRLDAEVLMLAKEAQKLGVELDMCFYNLLL 843
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG----LFEKAERALKELE 119
A V + E++ + R + T +A+IYV AG + E E + +E
Sbjct: 844 PAKFRVQGLEDVEKLYATIT-SPRDRTRFFTCLAMANIYVSAGRNDKVLEMLELIDQGME 902
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVNLKDL 178
+ Y LI++Y + + V R W L+ PNT + Y +I+ L +
Sbjct: 903 AGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTED--YCCIIRAWGKLGHV 960
Query: 179 PGAEKCFKEWESGCATYDIR-VTNVMIGAYAKEGRLENAEELKERARRR-GADPNAKTWE 236
AE F+ E+ + V N M+ Y+ G E AE L R G + +
Sbjct: 961 VRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVRRMEYELGVKLDPWCYH 1020
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
Y + GD+ + L A G+ + ++ P + T+ + DVD AE L
Sbjct: 1021 HLVLLYAKAGDIGKMLSTLRAAQACGKKER-RFTPLAATLWAALNTLADAGDVDTAEETL 1079
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLL 347
K++ + ++ L+R + A R + + R+ + V + ++KL
Sbjct: 1080 TRWKRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLADGVVPNGETEKLF 1130
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 95/227 (41%), Gaps = 9/227 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+++YA ++ + +K P++ Y +RA + + AE + + +
Sbjct: 913 YNVLISMYASLEDGARVERTWERLKQQR-QPNTEDYCCIIRAWGKLGHVVRAETIFQVAE 971
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NAHRDLSAYQFLITLYGQTGN 142
+ + T F+ + +Y AG+ E+AE ++ +E D Y L+ LY + G+
Sbjct: 972 ANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVRRMEYELGVKLDPWCYHHLVLLYAKAGD 1031
Query: 143 LSEVYRIWRSLRLAFPNTANISYL-----NMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
+ ++ R+ + + L + L + D+ AE+ W+
Sbjct: 1032 IGKMLSTLRAAQACGKKERRFTPLAATLWAALNTLADAGDVDTAEETLTRWKRSGYRVTT 1091
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ N ++ A+ R E ER G PN +T ++F++ ++
Sbjct: 1092 GLYNRLLRAHLVAAR--PTERFVERMLADGVVPNGETEKLFNELKMK 1136
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 12/279 (4%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+P SL+ + + G +K +++ ++ S +PD TYNV + +I A +V++
Sbjct: 150 IPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDR 209
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M VA D T++ + ++G ++A L + + D+ Y LI +
Sbjct: 210 MN----VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 265
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVT 200
+ + ++ +R ++Y +I + L A K S GC ++
Sbjct: 266 GVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP-NVITH 324
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N+++ + GR +AE+L R+G P+ T+ I ++ R G + A+D LEK
Sbjct: 325 NIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM 384
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
G P+S + + F +EK +D A +L+I+
Sbjct: 385 HG------CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 123/297 (41%), Gaps = 15/297 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL++M+ + +N L+ K G ++ + M + P+ T+N+ +
Sbjct: 269 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 328
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R++ + AE+++ +M R G + TF+ L + GL +A L+++
Sbjct: 329 RSMCSTGRWMDAEKLLSDMLRKG-CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 387
Query: 124 HRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y L+ + + + E I S R +P+ ++Y ++ L +
Sbjct: 388 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS-RGCYPDI--VTYNTLLTALCKDGKVDV 444
Query: 181 AEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + + S GC+ I N +I +K G+ E A +L + RR+G P+ T+
Sbjct: 445 AVEILNQLSSKGCSPVLI-TYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
R G + A+ +G P++ T + M + + D A FL
Sbjct: 504 SGLSREGKVDEAIKFFHDL------EGLGIRPNAITYNSIMLGLCKSRQTDRAIDFL 554
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/254 (15%), Positives = 105/254 (41%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+ + +N+ + +N+++ +G ++ ++ PD TY + + A
Sbjct: 204 LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 263
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+ + A ++++EM+ G D T++ L + + G ++A + L + + ++
Sbjct: 264 ESGVGQAMKLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 322
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+ ++ TG + ++ + + + +++ +I L L A ++
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
T + N ++ + KE +++ A E + RG P+ T+ ++G +
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442
Query: 249 KLAVDCLEKAIDTG 262
+AV+ L + G
Sbjct: 443 DVAVEILNQLSSKG 456
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L++M++ N+ + +++L+ L K K +I +KAS+I PD YN +
Sbjct: 193 LQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGK 252
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +++EM RD V D ++S L +IYV+ F +A E+ DL+
Sbjct: 253 AKLFREARLLLQEM-RDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLT 311
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ E R++ S+R +SY +++V A F+
Sbjct: 312 TCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLM 371
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+S ++ N MI Y K E A L + ++RG +PNA T+ + + G +
Sbjct: 372 QSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKL 431
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 432 DRAAILFQKLRSSG 445
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A+ L M+++ + + + +N+L+ +Y + + + + M++ + + TYN
Sbjct: 325 MPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYN 384
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A +I+EMK+ G + + T+S + SI+ +AG ++A ++L +
Sbjct: 385 TMINIYGKTLEHEKATNLIQEMKKRG-IEPNAITYSTIISIWEKAGKLDRAAILFQKLRS 443
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D YQ +I Y + G ++ R+ L+ NI I +L +
Sbjct: 444 SGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIGILARAGRIEE 499
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
A F++ DI V MI ++K + N E+ E+ R G P++
Sbjct: 500 ATWVFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDS 551
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 110/238 (46%), Gaps = 14/238 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++MK+ + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 397 EKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTM 456
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D I AG E+A ++ +
Sbjct: 457 IVAYERAGLVAHAKRLLHELKRPDNIPRD-----TAIGILARAGRIEEATWVFRQAFDAR 511
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
+D+S + +I L+ + V ++ +R+ FP++ I+ + + L++
Sbjct: 512 EVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDVIALV--LNAFGKLREFDK 569
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A+ +++ E GC D V M+ Y E L E+ ++PN E+
Sbjct: 570 ADALYRQMHEEGCVFPD-EVHFQMLSLYGARKDFVMVESLFEKL---DSNPNINKKEL 623
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 129/327 (39%), Gaps = 46/327 (14%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
P + YNV +R + A + +EM++ G ++ D T+S L + + + GLF+ +
Sbjct: 133 PSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKG-LSPDRYTYSTLITSFGKHGLFDSSLF 191
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--------LAFPNTAN--- 162
L+++E N DL Y LI L + + S+ I+ L+ +A+ + N
Sbjct: 192 WLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFG 251
Query: 163 ------------------------ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+SY ++ + V+ + A F E D+
Sbjct: 252 KAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLT 311
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
N+MI Y + + A+ L R+ G PN ++ Y G+ D +A
Sbjct: 312 TCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVY---GE----ADLFGEA 364
Query: 259 IDTGRGDGGKWVPSS-ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRT 317
I R K V + T T + + + + + A ++ +KK + + +I
Sbjct: 365 IHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISI 424
Query: 318 YAAAGRT--SPVMLRRLKMEKVEVSEA 342
+ AG+ + ++ ++L+ V + E
Sbjct: 425 WEKAGKLDRAAILFQKLRSSGVRIDEV 451
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 116/292 (39%), Gaps = 11/292 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +L +M E N ++ +Y + P++ + M+ I P+ +YN +
Sbjct: 293 EALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLL 352
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R D+ G + + + V + T++ + +IY + EKA ++E++ R
Sbjct: 353 RVYGEA-DLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGI 411
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y +I+++ + G L +++ LR + + Y MI + A++
Sbjct: 412 EPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKR 471
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E + D + IG A+ GR+E A + +A + + + +
Sbjct: 472 LLHELKRP----DNIPRDTAIGILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFS 527
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
+N V+ EK G + P S+ I + F + ++ D A+
Sbjct: 528 KNKKYGNVVEVFEKMRVVG------YFPDSDVIALVLNAFGKLREFDKADAL 573
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 140/320 (43%), Gaps = 10/320 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L + E ++ FN L+ K G+P++ + + M++S + P+ TYN +
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139
Query: 64 RALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L ++ A ++EEM ++ G+ A D T++ L + + A +A ++++
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAG 199
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ D+ L++ + G++ E I ++LA P I+Y ++I L + A
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA 259
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ K + D+ N ++ + K G L A E+ E R P+ T+ I +
Sbjct: 260 EILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 316
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R G +++A LE+ + G ++P + + + +++ A ++ +
Sbjct: 317 CRVGQVQVAFYLLEEIVRQG------YIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370
Query: 303 VDDLGVEVFEPLIRTYAAAG 322
GV ++ L+ Y AG
Sbjct: 371 GCRTGVVMYSSLVSGYCRAG 390
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 1/225 (0%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
E +K ++ + FN+L+ + K G + +++EM +I+PD TY + + L V
Sbjct: 260 EILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 319
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
+ A ++EE+ R G + D +++L ++G E+A + +KE+ R +
Sbjct: 320 GQVQVAFYLLEEIVRQGYI-PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
Y L++ Y + GN+ + I + +Y ++ L+ + A +
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 438
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ D+ N +I K R+ A +L + RG PN T
Sbjct: 439 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVT 483
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 11/269 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A +LE+M N+ + + L+ + G + +++E+ +PD Y
Sbjct: 286 MLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYT 345
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L +I A ++++EM G +S+L S Y AG KA L E+ +
Sbjct: 346 SLVDGLCKSGEIEEAHKLVKEMSVRG-CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS 404
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
N L Y ++ + G++S+ + L R P+ ++Y +I L +
Sbjct: 405 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDV--VTYNTLIDGLCKANRV 462
Query: 179 PGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A E S GC D+ + +V+ G + GR+++A L R+ PN +
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFG-LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTS 521
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
D ++ M A C+ +D RG G
Sbjct: 522 LIDGLCKSDRMDDA--CM--VLDAMRGQG 546
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Query: 55 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
D ++YN + L +V +++ G + + TF L +AG +A
Sbjct: 26 DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSG-CSPNLVTFKILIRGNCKAGQAMRALEF 84
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
L+ L+ + D+ + LI + GN + +++ ++ + ++Y +I L
Sbjct: 85 LRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCK 144
Query: 175 LKDLPGAEKCFKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
+L A + +E + G + DI N +I A+ + R+ A +E+ + G +P+
Sbjct: 145 SGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDV 204
Query: 233 KTWEIFSDYYLRNGDMKLAVDCLE 256
T I ++GD++ A++ L+
Sbjct: 205 LTCNILVSGICKDGDVEEALEILD 228
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKAE + K+K+L S +N ++ LY K KI ++ M+ +I P +TY +
Sbjct: 115 VEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKIDR-RKIADVLLLMEKENIKPCPFTYKI 173
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ NDISG E+V++ MK +G + D +T S LA YV GL KA+ LKE+E
Sbjct: 174 LIDGKGLSNDISGMEQVVDSMKAEG-IELDVSTLSLLAKHYVSCGLKVKAKAILKEIEET 232
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
N++ + L+ YG+ EV R+W
Sbjct: 233 NSNGPQWLCRILLPFYGKLQMEDEVRRLW 261
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 127/327 (38%), Gaps = 34/327 (10%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+A + ++MK ++ +N ++ LY K + EM++ P+ TY
Sbjct: 255 TEQAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTA 314
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAA----------------------DWTTFSNLA 99
+ A A AE + E+++ DG + + D +++ +
Sbjct: 315 LVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 374
Query: 100 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 159
Y AGL AE +E++ + ++ L++ Y + ++++ I + +
Sbjct: 375 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVE 434
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+M+ + L EK E E+G T DI N++I Y K G LE EEL
Sbjct: 435 PDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEEL 494
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL---EKAIDTGRGDGGKWVPSSETI 276
+ R P+ TW Y R KL V CL E+ ID+G P T
Sbjct: 495 FVELKERNFKPDVVTWTSRIGAYSRK---KLYVKCLEIFEEMIDSG------CAPDGGTA 545
Query: 277 RTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ + E V+ L + K V
Sbjct: 546 KVLLSACSSEDQVEQVTSVLRTMHKGV 572
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 124/319 (38%), Gaps = 46/319 (14%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 106
++ SS PD +N+ + A AE + ++ + R T++ L Y AG
Sbjct: 159 LRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQL-LESRCVPTEDTYTLLIKAYCMAG 217
Query: 107 LFEKAERALKELENRNAHRDLSAYQ-FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 165
L EKAE L E++N + ++ Y ++ L + GN + +++ ++ +Y
Sbjct: 218 LIEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETY 277
Query: 166 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER--- 222
MI + + K F E S +I ++ A+A+EG E AEE+ E+
Sbjct: 278 NLMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 337
Query: 223 --------------------ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ G +P+ ++ I D Y R G A E+ G
Sbjct: 338 DGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 397
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTY 318
P+ ++ + + + +DV E + K + + GVE V ++ Y
Sbjct: 398 ------IAPTMKSHMLLLSAYSRARDVTKCEAIV----KEMSENGVEPDTFVLNSMLNLY 447
Query: 319 AAAGRTSPVMLRRLKMEKV 337
G+ + KMEK+
Sbjct: 448 GRLGQFT-------KMEKI 459
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 137/331 (41%), Gaps = 18/331 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA L +M E + + NS++ K +K +I+Q+M S I PD +TY++
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + AERV+E+M G + T+++L Y +G++ ++ R K++ +
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAG-TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 344
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD--LP 179
+ I + G +E I+ S+ L P ISY M+ D L
Sbjct: 345 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 404
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
F + + V N++I AYA+ G ++ A + E + +G P+ T+
Sbjct: 405 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 464
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-----IRTFMRHFEQEKDVDGAEG 294
R G + A+ +D G VP SE I+ H E V E
Sbjct: 465 SSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYGCLIQGCCNHGEL---VKAKEL 514
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
E++ K + GV+ F +I GR +
Sbjct: 515 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 545
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 120/298 (40%), Gaps = 39/298 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE +LE+M E +S+ +NSL+ Y+ +G + + ++M + ++P N +
Sbjct: 297 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 356
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------- 87
+ AL + A+ + + M G
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 416
Query: 88 -VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE- 145
+A + F+ L + Y G+ +KA ++++N+ D + +I+ + G L +
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMI 204
+++ + + P + + Y +IQ N +L A++ E ++ + +I
Sbjct: 477 LHKFNHMVDIGVPPSEAV-YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 535
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEGR+ +++ + + G PN T+ + Y G+M+ A L+ G
Sbjct: 536 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A ALL+ M + + + + +L+ Y K G + + ++M + P S Y++
Sbjct: 580 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 639
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+++ EM G + T L + ++A L++L N
Sbjct: 640 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL-CRNNCTDEANMLLEKLFAMN 698
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGA 181
D+ + +I+ + G E ++ ++ + NI +Y MI L+ + A
Sbjct: 699 VKFDIITFNIVISAMFKVGRRQEAKELFDAIS-TYGLVPNIQTYSMMITNLIKEESYEEA 757
Query: 182 EKCFKEWESGCATYDIRVTNVMI 204
+ F E D R+ N ++
Sbjct: 758 DNLFISVEKSGHASDSRLLNHIV 780
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P+ TY++
Sbjct: 684 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 743
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A+ + +++ G A+D +++ + + KA L +
Sbjct: 744 MITNLIKEESYEEADNLFISVEKSGH-ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 802
Query: 122 NAHRDLSAYQFLITLYGQTGNLSE 145
N + S L +L+ + G E
Sbjct: 803 NLTLEASTISLLASLFSREGKYRE 826
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 11/292 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A +L +M L +S+ +N L+ + ++ EM PD +TYN
Sbjct: 440 LLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYN 499
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L V+ I A R+ M DG VA + T++ L + G F+KA + ++
Sbjct: 500 SLIYGLCKVDRIDEAFRLFHNMLLDGAVANN-VTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R D Y LI + + GN+ + ++ + + IS MI L + +
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + ++ + DI N ++ K GR++ A L +R + G P+A T+ F
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET----IRTFMRHFEQEKD 288
+ + G + A + I+ G +VPS+ T + T ++ QE +
Sbjct: 679 WQCKEGMVNDACSFFYRGIENG------FVPSNLTWNVLVYTLLKQSNQENN 724
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+++++M +P+S Y + AL+ N +S A +++EEM G D TF+++
Sbjct: 239 SLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG-CMPDVQTFNDVIHG 297
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ A + + + R + D Y FL+ + G L+E +I +++ PN A
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL--IKIPCPNNA 355
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELK 220
++ L I V L A+ E DI N+++ KEG L A +L
Sbjct: 356 ILNTL--INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNG 246
RRG +PN T+ I + + G
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAG 439
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 137/331 (41%), Gaps = 18/331 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA L +M E + + NS++ K +K +I+Q+M S I PD +TY++
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + AERV+E+M G + T+++L Y +G++ ++ R K++ +
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMVEAG-TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 268
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD--LP 179
+ I + G +E I+ S+ L P ISY M+ D L
Sbjct: 269 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 328
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
F + + V N++I AYA+ G ++ A + E + +G P+ T+
Sbjct: 329 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 388
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-----IRTFMRHFEQEKDVDGAEG 294
R G + A+ +D G VP SE I+ H E V E
Sbjct: 389 SSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYGCLIQGCCNHGEL---VKAKEL 438
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
E++ K + GV+ F +I GR +
Sbjct: 439 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 469
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 120/298 (40%), Gaps = 39/298 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE +LE+M E +S+ +NSL+ Y+ +G + + ++M + ++P N +
Sbjct: 221 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 280
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------- 87
+ AL + A+ + + M G
Sbjct: 281 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 340
Query: 88 -VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE- 145
+A + F+ L + Y G+ +KA ++++N+ D + +I+ + G L +
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMI 204
+++ + + P + + Y +IQ N +L A++ E ++ + +I
Sbjct: 401 LHKFNHMVDIGVPPSEAV-YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 459
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEGR+ +++ + + G PN T+ + Y G+M+ A L+ G
Sbjct: 460 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 96/248 (38%), Gaps = 3/248 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A ALL+ M + + + + +L+ Y K G + + ++M + P S Y++
Sbjct: 504 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 563
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+++ EM G + T L + ++A L++L N
Sbjct: 564 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL-CRNNCTDEANMLLEKLFAMN 622
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGA 181
D+ + +I+ + G E ++ ++ + NI +Y MI L+ + A
Sbjct: 623 VKFDIITFNIVISAMFKVGRRQEAKELFDAIS-TYGLVPNIQTYSMMITNLIKEESYEEA 681
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F E D R+ N ++ + + A A T + +
Sbjct: 682 DNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASL 741
Query: 242 YLRNGDMK 249
+ R G +K
Sbjct: 742 FSREGMIK 749
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P+ TY++
Sbjct: 608 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 667
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A+ + +++ G A+D +++ + + KA L +
Sbjct: 668 MITNLIKEESYEEADNLFISVEKSGH-ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 726
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVY 147
N + S L +L+ + G + ++
Sbjct: 727 NLTLEASTISLLASLFSREGMIKGLF 752
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 137/331 (41%), Gaps = 18/331 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA L +M E + + NS++ K +K +I+Q+M S I PD +TY++
Sbjct: 64 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + AERV+E+M G + T+++L Y +G++ ++ R K++ +
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAG-TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 182
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD--LP 179
+ I + G +E I+ S+ L P ISY M+ D L
Sbjct: 183 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 242
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
F + + V N++I AYA+ G ++ A + E + +G P+ T+
Sbjct: 243 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 302
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-----IRTFMRHFEQEKDVDGAEG 294
R G + A+ +D G VP SE I+ H E V E
Sbjct: 303 SSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYGCLIQGCCNHGEL---VKAKEL 352
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
E++ K + GV+ F +I GR +
Sbjct: 353 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 383
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 120/298 (40%), Gaps = 39/298 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE +LE+M E +S+ +NSL+ Y+ +G + + ++M + ++P N +
Sbjct: 135 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 194
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------- 87
+ AL + A+ + + M G
Sbjct: 195 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 254
Query: 88 -VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE- 145
+A + F+ L + Y G+ +KA ++++N+ D + +I+ + G L +
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMI 204
+++ + + P + + Y +IQ N +L A++ E ++ + +I
Sbjct: 315 LHKFNHMVDIGVPPSEAV-YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 373
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEGR+ +++ + + G PN T+ + Y G+M+ A L+ G
Sbjct: 374 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 431
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 93/246 (37%), Gaps = 5/246 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A ALL+ M + + + + +L+ Y K G + + ++M + P S Y++
Sbjct: 418 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 477
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+++ EM G + T L + ++A L++L N
Sbjct: 478 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL-CRNNCTDEANMLLEKLFAMN 536
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG 180
D+ + +I+ + G E ++ ++ PN +Y MI L+ +
Sbjct: 537 VKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQ--TYSMMITNLIKEESYEE 594
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ F E D R+ N ++ + + A A T + +
Sbjct: 595 ADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLAS 654
Query: 241 YYLRNG 246
+ R G
Sbjct: 655 LFSREG 660
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P+ TY++
Sbjct: 522 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 581
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A+ + +++ G A+D +++ + + KA L +
Sbjct: 582 MITNLIKEESYEEADNLFISVEKSGH-ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 640
Query: 122 NAHRDLSAYQFLITLYGQTGNLSE 145
N + S L +L+ + G E
Sbjct: 641 NLTLEASTISLLASLFSREGKYRE 664
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 12/275 (4%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
SL+ + ++G +K I++ ++ S +PD TYNV + +I A V+E M
Sbjct: 146 SLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS-- 203
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
VA D T++ + ++G ++A L R + D+ Y LI + +
Sbjct: 204 --VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQ 261
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMI 204
++ +R ++Y +I + L A K S GC ++ N+++
Sbjct: 262 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKP-NVITHNIIL 320
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
+ GR +AE L R+G P+ T+ I ++ R + A+D LEK G
Sbjct: 321 RSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG-- 378
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
VP+S + + F QEK +D A +LEI+
Sbjct: 379 ----CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 409
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 120/297 (40%), Gaps = 15/297 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL++M++ + +N L+ K G ++ + M + P+ T+N+ +
Sbjct: 261 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIIL 320
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R++ + AER++ +M R G + TF+ L + L +A L+++
Sbjct: 321 RSMCSTGRWMDAERLLSDMLRKG-CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGC 379
Query: 124 HRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y L+ + Q + E I S R +P+ ++Y ++ L +
Sbjct: 380 VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS-RGCYPDI--VTYNTLLTALCKDGKVDA 436
Query: 181 AEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + + S GC+ I N +I K G+ E A EL E RR+G P+ T+
Sbjct: 437 AVEILNQLSSKGCSPVLI-TYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLL 495
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
R G + A+ +G PS+ T M + + A FL
Sbjct: 496 RGLGREGKVDEAIKIFHDM------EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL 546
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/255 (16%), Positives = 109/255 (42%), Gaps = 3/255 (1%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
LE ++ +++ + +N+++ +G ++ ++ PD TY + + A
Sbjct: 196 LEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCN 255
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+ + A ++++EM++ G D T++ L + + G ++A + L + + ++
Sbjct: 256 DSGVGQAMKLLDEMRKKG-CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVI 314
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+ ++ TG + R+ + + + +++ +I L + L A ++
Sbjct: 315 THNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 374
Query: 189 -ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ GC + N ++ + +E +++ A E E RG P+ T+ ++G
Sbjct: 375 PKHGCVPNSLSY-NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 433
Query: 248 MKLAVDCLEKAIDTG 262
+ AV+ L + G
Sbjct: 434 VDAAVEILNQLSSKG 448
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 137/331 (41%), Gaps = 18/331 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA L +M E + + NS++ K +K +I+Q+M S I PD +TY++
Sbjct: 206 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 265
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + AERV+E+M G + T+++L Y +G++ ++ R K++ +
Sbjct: 266 IIDGLCKSKAMDKAERVLEQMVEAG-TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 324
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD--LP 179
+ I + G +E I+ S+ L P ISY M+ D L
Sbjct: 325 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 384
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
F + + V N++I AYA+ G ++ A + E + +G P+ T+
Sbjct: 385 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 444
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-----IRTFMRHFEQEKDVDGAEG 294
R G + A+ +D G VP SE I+ H E V E
Sbjct: 445 SSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYGCLIQGCCNHGEL---VKAKEL 494
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
E++ K + GV+ F +I GR +
Sbjct: 495 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 525
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 120/298 (40%), Gaps = 39/298 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE +LE+M E +S+ +NSL+ Y+ +G + + ++M + ++P N +
Sbjct: 277 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 336
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------- 87
+ AL + A+ + + M G
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 396
Query: 88 -VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE- 145
+A + F+ L + Y G+ +KA ++++N+ D + +I+ + G L +
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMI 204
+++ + + P + + Y +IQ N +L A++ E ++ + +I
Sbjct: 457 LHKFNHMVDIGVPPSEAV-YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 515
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEGR+ +++ + + G PN T+ + Y G+M+ A L+ G
Sbjct: 516 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 96/248 (38%), Gaps = 3/248 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A ALL+ M + + + + +L+ Y K G + + ++M + P S Y++
Sbjct: 560 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 619
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+++ EM G + T L + ++A L++L N
Sbjct: 620 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL-CRNNCTDEANMLLEKLFAMN 678
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGA 181
D+ + +I+ + G E ++ ++ + NI +Y MI L+ + A
Sbjct: 679 VKFDIITFNIVISAMFKVGRRQEAKELFDAIS-TYGLVPNIQTYSMMITNLIKEESYEEA 737
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F E D R+ N ++ + + A A T + +
Sbjct: 738 DNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASL 797
Query: 242 YLRNGDMK 249
+ R G +K
Sbjct: 798 FSREGMIK 805
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P+ TY++
Sbjct: 664 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 723
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A+ + +++ G A+D +++ + + KA L +
Sbjct: 724 MITNLIKEESYEEADNLFISVEKSGH-ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 782
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVY 147
N + S L +L+ + G + ++
Sbjct: 783 NLTLEASTISLLASLFSREGMIKGLF 808
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 161/358 (44%), Gaps = 13/358 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A+ K KE L + + F+ L LY + G K+ + ++++A+ + P N
Sbjct: 194 MILHADDFYYKFKEAKLKPNDITFSILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLN 253
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGR--VAADWTTFSNLASIYVEAGLFEKAERAL--- 115
M + ++ IS AE + ++ G + +T+S +A+ Y+ AG+ +KA+ L
Sbjct: 254 NLMVSKYELHGISSAEEIFNQLVPAGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVI 313
Query: 116 -KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
K ++ + + Y LI++Y N + R+W+ + + Y+ MI+
Sbjct: 314 EKAMDQGSFPKLRRTYHILISMYSTMKNRDGMERVWKKIE----DLKAQDYVAMIESCGR 369
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
++ AEK FKE + + ++G YA +G+ + AE+L ++ + + +A
Sbjct: 370 ADEVGSAEKYFKEADRKGLLNQPSLFAALLGVYAGKGQADKAEKLFKKMKEQDVSRDALC 429
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK-DVDGAE 293
+ L ++ AV+ LE A G D G+ P T ++ +E DV AE
Sbjct: 430 YHYIILANLNAKNIDRAVEILELAEAAGMRD-GRSRPFLGTFCDVLKTIAKETGDVALAE 488
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR-TSPVMLRRLKMEKVEVSEASKKLLEAI 350
L +K + V+ L+R Y AG+ L+RL ++ + + +LL+ +
Sbjct: 489 TLLADWRKGKYRTDIAVYNHLLRVYLKAGKQVQGPFLKRLAGNNMKPTRETHQLLQQL 546
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 150/357 (42%), Gaps = 11/357 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L +++K S N L ++Y + G ++ + +E + + D YN+ +
Sbjct: 784 RAERLFKELKATGTISSCYSLNLLASMYRQLGLDAEVLMLAKEAQKLGVELDMCFYNLLL 843
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG----LFEKAERALKELE 119
A V + E++ + R + T +A+IYV AG + E E + +E
Sbjct: 844 PAKFRVQGLEEVEKLYATIT-SPRDRTRFFTCLAMANIYVSAGRNDKVLEMLELIDQGME 902
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVNLKDL 178
+ Y LI++Y + + V R W L+ PNT + Y +I+ L +
Sbjct: 903 AGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTED--YCCIIRAWGKLGHV 960
Query: 179 PGAEKCFKEWESGCATYDIR-VTNVMIGAYAKEGRLENAEELKERARRR-GADPNAKTWE 236
AE F+ E+ + V N M+ Y+ G E AE L +R G + +
Sbjct: 961 VRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVQRMEYELGVKLDPWCYH 1020
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
Y + GD+ + L A G+ + ++ P + T+ + DVD AE L
Sbjct: 1021 HLVLLYAKAGDIGKMLSTLRAAQAGGKKER-RFTPLAATLWAALNTLADAGDVDTAEETL 1079
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICVE 353
K++ + ++ L+R + A R + + R+ ++ V + ++KL + V+
Sbjct: 1080 TRWKRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLVDGVVPNGETEKLFNELKVK 1136
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 143/337 (42%), Gaps = 46/337 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A LL +M+++ S F +L+ A+ G E A++ E+K S + PD YNV
Sbjct: 193 ERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVC 252
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + E+K G + D +++++ + +AG +AE ++E
Sbjct: 253 IDCFGKAGSVDMAWKFFHELKAHG-LRPDDVSYTSMVWVLCKAGRLGEAEELFGQME--- 308
Query: 123 AHRDLS---AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
A RD+ AY +I YG + Y++ LR + +S+ +++ L + +
Sbjct: 309 AERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 368
Query: 180 GAEKCF----KEWESGCATYDIRV------------------------------TNVMIG 205
A F K+ + +TY+I + N+M+
Sbjct: 369 EALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVD 428
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
K +LE A + E A RG +PN+ T+ D + G + A EK +D G D
Sbjct: 429 RLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGH-D 487
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ +S IR F H +E DG + + E++++
Sbjct: 488 ANPIIYTS-LIRNFFMHGRKE---DGHKIYKEMIRRG 520
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 1/230 (0%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E +LE+M L G + +L+ ++ E +I M+ P Y V + A
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
LA A ++ +M+ G F+ L G E A + E++
Sbjct: 186 LAEARQPERALELLRQMQDVG-YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEP 244
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D+ Y I +G+ G++ ++ + L+ ++SY +M+ VL L AE+ F
Sbjct: 245 DIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELF 304
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ E+ N MI Y R ++A +L ER R RG P+ ++
Sbjct: 305 GQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSF 354
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ A L EKM L+ G + P + SL+ + G E I +EM PD N
Sbjct: 472 DDAYRLFEKM--LDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLN 529
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+M + ++ + E+MK G + D ++S L +AG + + +
Sbjct: 530 TYMDCVFKAGEVEKGRAIFEDMKSFGFLP-DVRSYSILIHGLTKAGQARETSNIFQAMSQ 588
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D AY ++ ++G + + Y + +++ + +Y +++ L + L
Sbjct: 589 QGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDE 648
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+E +S ++ + + +I + K GR++ A + E ++G PN TW D
Sbjct: 649 AYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMD 708
Query: 241 YYLRNGDMKLAVDCLE 256
++ ++ A+ C +
Sbjct: 709 ALVKTEEIDEALICFQ 724
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 100/216 (46%), Gaps = 5/216 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E+ K + + + ++SL+ + K G ++ I++EM + P+ YT+N
Sbjct: 647 DEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 706
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M AL +I A + MK + + + + T+S L + + KA +E++ +
Sbjct: 707 MDALVKTEEIDEALICFQSMK-EMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 765
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG 180
++ Y +I+ + GN+++ Y ++ + P++A S+ +I+ + N
Sbjct: 766 LIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSA--SFNALIEGMSNANRPME 823
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
A + F+E +++ ++ A K LE A
Sbjct: 824 AYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQA 859
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 12/263 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA +LE+MK ++ + + S++ AK ++ + +E K+ I + Y+
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSS 670
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ V I A ++EEM + G + + T+++L V+ ++A + ++
Sbjct: 671 LIDGFGKVGRIDEAYLILEEMMKKG-LTPNVYTWNSLMDALVKTEEIDEALICFQSMKEM 729
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLP 179
+ Y LI + ++ + W+ ++ PN ++Y MI L + ++
Sbjct: 730 KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNV--VTYTTMISGLAKVGNIT 787
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F+ +++ D N +I + R A ++ E R RG N KT
Sbjct: 788 DAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLL 847
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
D + +CLE+A G
Sbjct: 848 DALNKT-------ECLEQAAIVG 863
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K L E MK + +N+L+T + E+ A+ ++MK+ +PD TYN +
Sbjct: 87 KITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLL 146
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
I A V+ EM+ +G + T+++L S Y GL E+A ++ R
Sbjct: 147 DVYGKSRRIKEAIEVLREMEVNG-CSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGI 205
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y +++ + +TG R++ +R A ++ +I++ N K
Sbjct: 206 KLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMK 265
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+E + C DI N ++ + + G + + +R G P T+ Y
Sbjct: 266 VFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYS 325
Query: 244 RNGDMKLAVDCLEKAIDTG 262
R G A+ ++ +DTG
Sbjct: 326 RCGSFDQAMAMYKRMLDTG 344
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 105/235 (44%), Gaps = 1/235 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A A+ E MK + + +N+L+ +Y K+ ++ +++EM+ + P TYN
Sbjct: 119 LYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYN 178
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + A + +M G + D T++ + S +V G E A R +E+
Sbjct: 179 SLISAYARDGLLEEAMELKNQMVERG-IKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRT 237
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + LI ++G G +E+ +++ +++ +++ ++ V
Sbjct: 238 AGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSE 297
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
FKE + + N +I AY++ G + A + +R G P+ T+
Sbjct: 298 VSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTY 352
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 125/297 (42%), Gaps = 36/297 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + ++MK + +N+L++ Y++ G ++ A+ + M + I PD TYN
Sbjct: 294 MDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYN 353
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY---------------VEA 105
+ ALA +E+++ EM+ DG + T +L Y + +
Sbjct: 354 AVLAALARGGLWEQSEKILAEMQ-DGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICS 412
Query: 106 GLFE--------------------KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G+ E +AERA EL+ + DLS +I +YG+ +++
Sbjct: 413 GVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTK 472
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
I ++ + + +Y +++ + ++ +E+ KE + DI N +I
Sbjct: 473 TNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIF 532
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
AY + GR++ A + R G P+ T+ F Y + + A+D + I G
Sbjct: 533 AYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHG 589
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 9/246 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E++E +L +M++ + + SL+ YA ++ A+ +E+ + I P + V
Sbjct: 366 EQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHA----VL 421
Query: 63 MRALAAVND----ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
++ L VN + AER E+KR G + D +T + + +IY + K L +
Sbjct: 422 LKTLVLVNSKCDLLLEAERAFLELKRKG-FSPDLSTLNAMIAIYGRRQMVTKTNEILNFM 480
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ L+ Y L+ ++ Q+ N + + + ISY +I +
Sbjct: 481 KESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRM 540
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A F E D+ N + +YA + E A ++ + G PN T+
Sbjct: 541 KEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSV 600
Query: 239 SDYYLR 244
D Y +
Sbjct: 601 IDGYCK 606
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 13/217 (5%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+L+ ++ + G ++ + +EMK +P+ TYN + A + A + + M
Sbjct: 283 NTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLD 342
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G + D +T++ + + GL+E++E+ L E+++ + + L+ Y
Sbjct: 343 TG-ITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGK--- 398
Query: 145 EVYRIWRSLRLAFPNTANI----SYLNMIQVLVNLKD--LPGAEKCFKEWESGCATYDIR 198
I R L LA + + + L VLVN K L AE+ F E + + D+
Sbjct: 399 ---EIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLS 455
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
N MI Y + + E+ + G P+ T+
Sbjct: 456 TLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATY 492
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M K +L MKE S +NSLM +++++ + E+ +++E+ A I PD +YN
Sbjct: 469 MVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYN 528
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A + EM+ G + D T++ + Y +FE+A + +
Sbjct: 529 TVIFAYCRNGRMKEASHIFSEMRESGLI-PDVITYNTFVASYAADSMFEEAIDVVCYMIK 587
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + Y +I Y + + + SL P+ +
Sbjct: 588 HGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSLHELDPHIS 628
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 2/221 (0%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
++ + K G +++ + PD Y Y + A + A V ++M+ +G
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 87 RVAADWTTFSNLASIYVEAGL-FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
T++ + ++Y + G+ + K + ++N D Y LIT + E
Sbjct: 64 -CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++ ++ ++Y ++ V + + A + +E E + I N +I
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
AYA++G LE A ELK + RG + T+ ++R G
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTG 223
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 134/359 (37%), Gaps = 44/359 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A L +M E + + ++++ + +TG E + +EM+ + P+ T+N
Sbjct: 189 LLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFN 248
Query: 61 VWMRA-------------------LAAVNDI----------------SGAERVIEEMKRD 85
++ V DI S V +EMKR
Sbjct: 249 ALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRV 308
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G V + T++ L S Y G F++A K + + DLS Y ++ + G +
Sbjct: 309 GFV-PERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQ 367
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+I ++ +++ +++ N K++ +E SG + ++
Sbjct: 368 SEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVL 427
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
+K L AE +R+G P+ T Y R + + L ++G
Sbjct: 428 VNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESG--- 484
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ PS T + M Q ++ + +E L EIL K + + + +I Y GR
Sbjct: 485 ---FTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKP-DIISYNTVIFAYCRNGR 539
>gi|357445509|ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482080|gb|AES63283.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 135/318 (42%), Gaps = 7/318 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L++++++ L + + +++ + A G E+ +MK+ P+ Y Y+ +
Sbjct: 192 KALELIQELQDNKLRMDDVIYGAILAVCASNGKWEEAEYYFNQMKSEGRSPNVYHYSSLL 251
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +A D + A+ +I++M+ +G +A + + L +YV GLFEK+ L +LE+
Sbjct: 252 NAYSACGDFTKADALIQDMESEG-LAPNKVILTTLLKVYVRGGLFEKSRELLAKLESLGY 310
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y L+ + E I+ + + ++ +I K A++
Sbjct: 311 AEDEMPYCVLMDGLAKARQTHEAKIIFDEMMKKHVMSDGYAHSIIISAFCRAKLFQEAKQ 370
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
K++++ YD+ + N M+ A+ + G +E+ E + P+ T+ I Y+
Sbjct: 371 LAKDFQTTFDKYDVVIMNSMLCAFCRAGEMESVMETLRKMDELAISPDYNTFNILIKYFC 430
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
R LA G + P+ E + + H QE A +L+ +
Sbjct: 431 RKNMYLLAYRTTMDMHSKG------YQPAEELCSSLIYHLGQENASSEAFSLYNMLRYSK 484
Query: 304 DDLGVEVFEPLIRTYAAA 321
+G + E ++ A
Sbjct: 485 RTIGKALHEKILHILLAG 502
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 59/308 (19%), Positives = 109/308 (35%), Gaps = 40/308 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK+ LL K++ L MP+ LM AK + I EM +M D Y +++
Sbjct: 296 EKSRELLAKLESLGYAEDEMPYCVLMDGLAKARQTHEAKIIFDEMMKKHVMSDGYAHSII 355
Query: 63 MRA--------------------------------LAAVNDISGAERVIEEMKR--DGRV 88
+ A L A E V+E +++ + +
Sbjct: 356 ISAFCRAKLFQEAKQLAKDFQTTFDKYDVVIMNSMLCAFCRAGEMESVMETLRKMDELAI 415
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
+ D+ TF+ L + ++ A R ++ ++ LI GQ SE +
Sbjct: 416 SPDYNTFNILIKYFCRKNMYLLAYRTTMDMHSKGYQPAEELCSSLIYHLGQENASSEAFS 475
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
++ LR + + ++ +L+ K L A FK+ + + T A+
Sbjct: 476 LYNMLRYSKRTIGKALHEKILHILLAGKLLKDAYVVFKDNATSISG---PTTKKFASAFM 532
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K G + ++ + G + +E+ YL + K D L + G G
Sbjct: 533 KSGNINLINDVMKTLHNCGYKIDQGLFEMAVSRYLGQPEKK---DLLLHLLQWMPGQGYV 589
Query: 269 WVPSSETI 276
PS+ +
Sbjct: 590 INPSTRNL 597
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 121/280 (43%), Gaps = 7/280 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L+++M+ L S+ + +L+ + A ++ +MK +P+ + Y+ +
Sbjct: 224 KALELVQEMERSRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSSLL 283
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +A D A+ ++++MK G V + + L +YV GLFEK+ L ELE+
Sbjct: 284 NAYSADGDYKKADMLVQDMKSAGLVP-NKVILTTLLKVYVRGGLFEKSRELLAELEDLGY 342
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y L+ ++ + E I+ ++ + Y MI L A++
Sbjct: 343 AEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCYSIMISAFCRSGLLKEAKQ 402
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+++E+ YD+ + N M+ AY + G +E+ ++ + P+ T+ I Y+
Sbjct: 403 LARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELAISPDWNTFHILIKYFC 462
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
+ LA +E + G P E + + H
Sbjct: 463 KEKLYLLAYRTMEDMHNKGHQ------PEEELCSSLISHL 496
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 85/205 (41%), Gaps = 34/205 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK+ LL ++++L MP+ LM AK+ + +I +EMK + D Y Y++
Sbjct: 328 EKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCYSIM 387
Query: 63 MRA-------------------------LAAVNDISGA-------ERVIEEMKR--DGRV 88
+ A L +N + A E V++ M++ + +
Sbjct: 388 ISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELAI 447
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
+ DW TF L + + L+ A R ++++ N+ + LI+ G+ S+ +
Sbjct: 448 SPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHLGKIRAHSQAFS 507
Query: 149 IWRSLRLAFPNTANISYLNMIQVLV 173
++ LR + + ++ +LV
Sbjct: 508 VYNMLRYSKRTMCKALHEKILHILV 532
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 98/230 (42%), Gaps = 6/230 (2%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISGAERVIEEMK 83
NS+++ + G E + +MK + PD+ TY+ + V + S A +++EM+
Sbjct: 174 NSVLSCLIRNGKFENSLKLFHQMKQDGLRPDAVTYSTLLAGCMKVKHGYSKALELVQEME 233
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R R+ D + L ++ ++AE ++++ ++ Y L+ Y G+
Sbjct: 234 R-SRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADGDY 292
Query: 144 SEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+ + + ++ A PN ++ L ++V V + + E E D
Sbjct: 293 KKADMLVQDMKSAGLVPNKVILTTL--LKVYVRGGLFEKSRELLAELEDLGYAEDEMPYC 350
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
+++ AK R+ A+ + E +++ + + I + R+G +K A
Sbjct: 351 LLMDGLAKSRRILEAKSIFEEMKKKQVKSDGYCYSIMISAFCRSGLLKEA 400
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 147/370 (39%), Gaps = 43/370 (11%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
+M E+ + + N L+ Y K G E IQ+ A PD TYN ++ L +
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 71 DISGAERVIEEMKRDGR----------------------------------VAADWTTFS 96
+ A +V++ M ++G D TTF+
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 360
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
L + E+A +++ + D+ + LI + G+ R++ ++ +
Sbjct: 361 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 420
Query: 157 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLEN 215
++Y +I L +L L A K+ ES GC I N +I K+ R+E
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI-TYNTIIDGLCKKMRIEE 479
Query: 216 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 275
AEE+ ++ +G NA T+ D ++ + A + + + I G P++ T
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG------LQPNNIT 533
Query: 276 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 335
+ + H+ ++ D+ A LE + ++ V + LI AGRT V L+ L+
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ-VALKVLRGM 592
Query: 336 KVEVSEASKK 345
+++ + K
Sbjct: 593 RIKGMRPTPK 602
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 38/278 (13%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
++ +N L+ + + + + ++ EM A I PD T+N M+AL + + A ++E
Sbjct: 146 TVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLE 205
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
EM G VA D TTF+ L +VE G E A R + LI Y +
Sbjct: 206 EMSSRG-VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264
Query: 141 GNL--------SEVYRIWRSLRLAFPNTAN---------------------------ISY 165
G + E+ + ++ + N +Y
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324
Query: 166 LNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
++ L L A+ + + GC DI N +I A RLE A +L +
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 225 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+G P+ T+ I + + GD LA+ E+ ++G
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 36/213 (16%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
I D+ YN + L + + E V EM G + D TF+ L A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARG-IKPDVVTFNTLMKALCRAHQVRT 199
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A L+E+ +R D + + L+ + + G++ R+ +
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM----------------- 242
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
E GC+ + V NV+I Y K GR+E+A ++ G +P
Sbjct: 243 -----------------LEMGCSATKVTV-NVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ T+ F + +N + A+ ++ + G
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 11/273 (4%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-E 112
P Y +R L AV + + ++ EM+R+G S L S Y LF+ A +
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDS-YEGQQLFDDAVD 130
Query: 113 RALKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 171
L +L+ D Y L+ + + + + ++ + +++ +++
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 172 LVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
L + A +E S G A + T +M G + +EG +E A +K R G
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG-FVEEGSIEAALRVKARMLEMGCSA 249
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
T + + Y + G ++ A+ +++ I G + P T TF+ Q V
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADG------FEPDQITYNTFVNGLCQNDHVG 303
Query: 291 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
A ++++ + D V + ++ G+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 136/316 (43%), Gaps = 8/316 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L ++M+EL + F +L+ +AK G + +++ EMK+SS+ D YNV + +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
V + A + E++ +G + D T++++ + +A ++A + LE
Sbjct: 250 KVGKVDMAWKFFHEIEANG-LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
AY +I YG G E Y + R + I+Y ++ L + + A + F+E
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEE 368
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ A ++ N++I + G+L+ A EL++ ++ G PN +T I D ++
Sbjct: 369 MKKDAAP-NLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
+ A E+ D P T + + + VD A E + +
Sbjct: 428 LDEACAIFEQM------DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTN 481
Query: 308 VEVFEPLIRTYAAAGR 323
V+ LI+ + GR
Sbjct: 482 SIVYTSLIKNFFNHGR 497
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 111/255 (43%), Gaps = 1/255 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A + EKM + + +S+ + SL+ + G E I ++M + PD N
Sbjct: 463 VDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNT 522
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+M + + + EE+K R D ++S L ++AG + ++ +
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKSR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D AY +I + + G +++ Y++ ++ ++Y ++I L + L A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E +S ++ + + +I + K GR++ A + E ++G PN TW D
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDA 701
Query: 242 YLRNGDMKLAVDCLE 256
++ ++ A+ C +
Sbjct: 702 LVKAEEINEALVCFQ 716
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 124/286 (43%), Gaps = 6/286 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A +LL++MK +L + +N + + K G + E++A+ + PD TY
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L N + A + E ++++ RV + ++ + Y AG F++A L+ +
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPG 180
+ + AY ++T + G + E R++ ++ A PN + +Y +I +L L
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLS--TYNILIDMLCRAGKLDC 395
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + + ++R N+M+ K +L+ A + E+ + P+ T+ D
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLID 455
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 286
+ G + A EK +D+ + + I+ F H +E
Sbjct: 456 GLGKVGRVDDAYKIYEKMLDSDCRTNS--IVYTSLIKNFFNHGRKE 499
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 8/259 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA LLE+MK + + + S++ AK ++ + +E K+ I + Y+ +
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V I A ++EE+ + G + + T+++L V+A +A + ++
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKG-LTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI + ++ + W+ ++ + ISY MI L ++ A
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F +++ D N MI + R +A L E RRRG + KT + D
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLH 843
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+N DCLE+A G
Sbjct: 844 KN-------DCLEQAAIVG 855
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 1/193 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++Q M+ P Y + A +AVN + ++M+ G F+ L +
Sbjct: 155 VVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG-YEPTVHLFTTLIRGF 213
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+ G + A L E+++ + D+ Y I +G+ G + ++ + +
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +MI VL L A + F+ E N MI Y G+ + A L ER
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 223 ARRRGADPNAKTW 235
R +G+ P+ +
Sbjct: 334 QRAKGSIPSVIAY 346
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 142/344 (41%), Gaps = 17/344 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE + +++EL+L + N ++ LY + K+ I++ M+ +I P +TY +
Sbjct: 82 QKAEQVFNEIRELSLPLTVSACNQMLLLYKRVSR-NKVVDILKLMENENIKPSLFTYKLM 140
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE--- 119
+ ND G E V+ MK +G D+ + +A Y+ L EKAE +E
Sbjct: 141 IDLKGRSNDTLGMESVLNLMKENG-FEPDFGIQTMVAKFYISGDLAEKAEEVTNAMEVYV 199
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N N H A + L+ LY G +V RIW P + +L I+ L +
Sbjct: 200 NANRH----AIRSLLDLYAILGRPDDVERIWN--LCTEPKLED--FLAAIKAWGKLGHIE 251
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE+ F + N M+ YA+ L+ ++ ER G + TW+
Sbjct: 252 RAEETFDALVKTSPKLTSKYFNAMLYVYAENELLDKGKKFIERMSLDGCPSSPLTWDAVV 311
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y+ +G++ A L + D P + ++ F ++ D+ AE L
Sbjct: 312 KLYVNSGELAKADSFLANVTE----DNPDRYPLFRSYVILLKAFAEKGDIHNAEKIFNRL 367
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEAS 343
K+ + L+ YA A T R+K +K S++
Sbjct: 368 KQTSYPARTLPYNLLLAAYANAQVTPYGFRERMKADKYSPSKSQ 411
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 27/319 (8%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +++ LY+K E ++ EM+ S + PD Y Y +++ + I A V++EMK
Sbjct: 424 YGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMK 483
Query: 84 RDG-----------------RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
DG + D + L EAG +AE L +L
Sbjct: 484 DDGLESVCNEREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCIV 543
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+A +I LYG+ G + ++ SL+ + Y MI++ K+L A F
Sbjct: 544 DTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFD 603
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E +D ++++ AY KEGR ++A L +RA++ G + + L++G
Sbjct: 604 RMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSG 663
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
++K A++ G PS++T + F + D+ A E+L + ++
Sbjct: 664 NLKGALEVY------GEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSS--EV 715
Query: 307 GVE--VFEPLIRTYAAAGR 323
G + + +I Y AGR
Sbjct: 716 GADEIAYSQMIHCYGCAGR 734
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 114/248 (45%), Gaps = 5/248 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A + M+ + +N+++ K G ++ A+ +MK I+P +TY +
Sbjct: 228 TEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTI 287
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + A + EM+R G + AD + ++ ++Y +AGL+E+AE+ KE++
Sbjct: 288 MINVWSKAGRFASAAETLAEMQRSGCI-ADEVVYCSIINMYGKAGLYEEAEKIFKEMDTL 346
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+Y + + + G +E +++ + T +++ ++ V + D+ A
Sbjct: 347 GLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQA 406
Query: 182 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
K + + E+G A ++ MI Y+K +E+AE L R G P+ + F
Sbjct: 407 TKVYNDMVEAGSA--NVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVK 464
Query: 241 YYLRNGDM 248
Y N DM
Sbjct: 465 LYC-NSDM 471
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 125/322 (38%), Gaps = 7/322 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE LL+K+ E ++ LY + G +K ++ ++ P Y YN +
Sbjct: 527 EAELLLDKLVEAGGCIVDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMI 586
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ A ++ A V + M+ +GR+ D T S L Y + G F+ A +K +
Sbjct: 587 KLCAVCKELEEAIFVFDRMEENGRMF-DAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGV 645
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D AY + ++GNL ++ ++ A + +Y +I + L DL A +
Sbjct: 646 AMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQ 705
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+ S D + MI Y GR + A +L + +G PN + D +
Sbjct: 706 AFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFA 765
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
R G A L G PSS T M + + AE L +++
Sbjct: 766 RAGLFAEARLLLSDMRRKG------CPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRG 819
Query: 304 DDLGVEVFEPLIRTYAAAGRTS 325
+ +IR Y G+ S
Sbjct: 820 LYPDCRHYNEVIRAYGNVGKLS 841
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 99/234 (42%), Gaps = 3/234 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + ++M+E F ++ + L+ Y K G + +++ K + D+ YN
Sbjct: 596 EEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTS 655
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++A ++ GA V EM+ + + T++ L S++ + G +A +A + L +
Sbjct: 656 LKANLKSGNLKGALEVYGEMQ-EADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSE 714
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY +I YG G E +++ + + Y N++ A
Sbjct: 715 VGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEAR 774
Query: 183 KCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ GC + +++ AY +G+ +AE L + RG P+ + +
Sbjct: 775 LLLSDMRRKGCPPSSVTYL-LLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHY 827
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL M+ SS+ + LM+ Y G P +++ M+ + PD YN +
Sbjct: 772 EARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVI 831
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
RA V +S A R+ E+K G + + F L I+++ G FE+ + K+L
Sbjct: 832 RAYGNVGKLSDACRIFYELKTVG-IGLELGCFRTLVKIHLDHGQFEQGWQIYKDL 885
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 144/329 (43%), Gaps = 13/329 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTY 59
M KA ++ ++K +S +NS++ + + GH EK+ + EM +PD+ TY
Sbjct: 174 MVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTY 233
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + A + A + +EMK +G + ++ + IY + G EKA ++E++
Sbjct: 234 SALIAAFGKLGRDDSAISLFDEMKENG-LHPTAKIYTTILGIYFKLGRVEKALGLVQEMK 292
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKD 177
+ + Y LI G+ G + E Y I+ ++ P+ I+ N+I +L
Sbjct: 293 EKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLIN--NLINLLGKAGR 350
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGA-YAKEGRLENAEELKERARRRGADPNAKTWE 236
L A K F+E ES T ++ N +I A + + R A E+ + G P++ T+
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
I D + + ++ A+ LE+ + G + P + + + K + A
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKG------FAPCPAAYCSLINALGKAKRYEAANELF 464
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
+ L++ V+ +I+ GR S
Sbjct: 465 QELRENCGYSSARVYAVMIKHLGKCGRLS 493
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 108/280 (38%), Gaps = 37/280 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A +L ++MKE L ++ + +++ +Y K G EK ++QEMK YTY
Sbjct: 247 DSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTEL 306
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + + A + M ++G D +NL ++ +AG A + +E+E+
Sbjct: 307 IKGVGKAGKVEEAYSIFMNMLKEG-CKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQ 365
Query: 123 AHRDLSAYQFLI-TLYGQTGNLSEVYRIWRSLRL---------------AFPNTANI--- 163
++ Y +I L+ SE + + ++ F T +
Sbjct: 366 CTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKA 425
Query: 164 -----------------SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
+Y ++I L K A + F+E C RV VMI
Sbjct: 426 LLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKH 485
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
K GRL A +L ++ G +P+ + +R G
Sbjct: 486 LGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVG 525
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +MK+L +N+LM+ + G ++ ++++ M+ + PD ++N+ + A
Sbjct: 498 LFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFA 557
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
GA + MK + ++ D +++ + AG+FE+A + +KE+ ++ DL
Sbjct: 558 RTGGPKGAIEMFTRMK-NSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDL 616
Query: 128 SAYQFLITLYGQ 139
Y ++ G+
Sbjct: 617 ITYSSILEAVGK 628
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT++A +LL M+E N ++ +A+TG P+ + MK S I PD +YN
Sbjct: 526 MTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYN 585
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 98
+ L+ A ++++EM G D T+S++
Sbjct: 586 TVLGCLSRAGMFEEAAKLMKEMNSKG-FEYDLITYSSI 622
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 147/370 (39%), Gaps = 43/370 (11%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
+M E+ + + N L+ Y K G E IQ+ A PD TYN ++ L +
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 71 DISGAERVIEEMKRDGR----------------------------------VAADWTTFS 96
+ A +V++ M ++G D TTF+
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 360
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
L + E+A +++ + D+ + LI + G+ R++ ++ +
Sbjct: 361 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 420
Query: 157 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLEN 215
++Y +I L +L L A K+ ES GC I N +I K+ R+E
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI-TYNTIIDGLCKKMRIEE 479
Query: 216 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 275
AEE+ ++ +G NA T+ D ++ + A + + + I G P++ T
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG------LQPNNIT 533
Query: 276 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 335
+ + H+ ++ D+ A LE + ++ V + LI AGRT V L+ L+
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ-VALKVLRGM 592
Query: 336 KVEVSEASKK 345
+++ + K
Sbjct: 593 RIKGMRPTPK 602
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 107/278 (38%), Gaps = 38/278 (13%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
++ +N L+ + + + + ++ EM A I PD T+N M+AL + + A ++E
Sbjct: 146 TVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLE 205
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
EM G VA D TTF+ L +VE G E A R + LI Y +
Sbjct: 206 EMSSRG-VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264
Query: 141 GNL--------SEVYRIWRSLRLAFPNTAN---------------------------ISY 165
G + E+ + ++ + N +Y
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 324
Query: 166 LNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
++ L L A+ + + GC DI N +I A RLE A +L +
Sbjct: 325 NIVVNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 225 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+G P+ T+ I + + GD LA+ E+ ++G
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 36/213 (16%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
I D+ YN + L + + E V EM G + D TF+ L A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARG-IKPDVVTFNTLMKALCRAHQVRT 199
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A L+E+ +R D + + L+ + + G++ R+ +
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM----------------- 242
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
E GC+ + V NV+I Y K GR+E+A ++ G +P
Sbjct: 243 -----------------LEMGCSATKVTV-NVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ T+ F + +N + A+ ++ + G
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 11/273 (4%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-E 112
P Y +R L AV + + ++ EM+R+G S L S Y LF+ A +
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDS-YEGQQLFDDAVD 130
Query: 113 RALKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 171
L +L+ D Y L+ + + + + ++ + +++ +++
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 172 LVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
L + A +E S G A + T +M G + +EG +E A +K R G
Sbjct: 191 LCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQG-FVEEGSIEAALRVKARMLEMGCSA 249
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
T + + Y + G ++ A+ +++ I G + P T TF+ Q V
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADG------FEPDQITYNTFVNGLCQNDHVG 303
Query: 291 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
A ++++ + D V + ++ G+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 145/363 (39%), Gaps = 43/363 (11%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
+M E+ + + N L+ Y K G E IQ+ A PD TYN ++ L +
Sbjct: 149 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 208
Query: 71 DISGAERVIEEMKRDGR----------------------------------VAADWTTFS 96
+ A +V++ M ++G D TTF+
Sbjct: 209 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 268
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
L + E+A +++ + D+ + LI + G+ R++ ++ +
Sbjct: 269 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 328
Query: 157 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLEN 215
++Y +I L +L L A K+ ES GC I N +I K+ R+E
Sbjct: 329 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI-TYNTIIDGLCKKMRIEE 387
Query: 216 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 275
AEE+ ++ +G NA T+ D ++ + A + + + I G P++ T
Sbjct: 388 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG------LQPNNIT 441
Query: 276 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 335
+ + H+ ++ D+ A LE + ++ V + LI AGRT V L+ L+
Sbjct: 442 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ-VALKVLRGM 500
Query: 336 KVE 338
+++
Sbjct: 501 RIK 503
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
++ +N L+ + + + + ++ EM A I PD T+N M+AL + + A ++E
Sbjct: 54 TVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLE 113
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
EM G VA D TTF+ L +VE G E A R + LI Y +
Sbjct: 114 EMSSRG-VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 172
Query: 141 GNLSEVY-RIWRSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
G + + I + + F P+ I+Y + L + A K D+
Sbjct: 173 GRVEDALGYIQQEIADGFEPD--QITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 230
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
N+++ K G+LE A+ + + RG P+ T+
Sbjct: 231 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 36/213 (16%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
I D+ YN + L + + E V EM G + D TF+ L A
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARG-IKPDVVTFNTLMKALCRAHQVRT 107
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A L+E+ +R D + + L+ + + G++ R+ +
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM----------------- 150
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
E GC+ + V NV+I Y K GR+E+A ++ G +P
Sbjct: 151 -----------------LEMGCSATKVTV-NVLINGYCKLGRVEDALGYIQQEIADGFEP 192
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ T+ F + +N + A+ ++ + G
Sbjct: 193 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K EA+ E+MK NL ++S++ Y + G+ + + E + I P+ +TY +
Sbjct: 155 KVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALI 214
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AE ++ +M+ G V + F+ + Y + +KA +E
Sbjct: 215 NGFCKIGQMEAAEMLVTDMQVRG-VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGI 273
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y L + + E + R + + PN ++SY +I + N D+ A
Sbjct: 274 ELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN--HVSYTTLISIHCNEGDMVEA 331
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F+E A + NVM+ Y K+G + AE K ++G P+ ++
Sbjct: 332 RRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHG 391
Query: 242 YLRNGDMKLAVDCLEK 257
+ NG + +A+ E+
Sbjct: 392 HCVNGKVDVALRLFEE 407
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL++M + +++ +NSL+ Y + +++ +++ M+ I P TY + +
Sbjct: 86 ARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 145
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L+A DI+ E V EEMK ++ D +S++ + Y AG +A E
Sbjct: 146 GLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIE 204
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y LI + + G + + +++ I + MI + A +
Sbjct: 205 PNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI 264
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E D+ N + + R++ A+ L +G PN ++ +
Sbjct: 265 KMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCN 324
Query: 245 NGDM 248
GDM
Sbjct: 325 EGDM 328
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+ M+ +G + + FN+++ Y + +K I M+ I D YTYN
Sbjct: 224 EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTL 283
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L N + A+ ++ M G V + +++ L SI+ G +A R +E+
Sbjct: 284 ACGLRRANRMDEAKNLLRIMIEKG-VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 342
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
A L Y ++ Y + G++ E R + SY ++ + A
Sbjct: 343 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 402
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ F+E + + ++ +I AKEGR E A +L + G P+ +
Sbjct: 403 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 455
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 1/232 (0%)
Query: 31 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 90
Y K+G ++ EM + ++ YN + A D +++ M+ +G +
Sbjct: 77 YCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG-IEP 135
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
T++ L A K E +E++++N D+ Y +I Y + GN+ ++
Sbjct: 136 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF 195
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+Y +I + + AE + + + V N MI Y ++
Sbjct: 196 DECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRK 255
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++ A E+K + G + + T+ + R M A + L I+ G
Sbjct: 256 NMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 307
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 144/329 (43%), Gaps = 13/329 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTY 59
M KA ++ ++K +S +NS++ + + GH EK+ + EM +PD+ TY
Sbjct: 174 MVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTY 233
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + A + A + +EMK +G + ++ + IY + G EKA ++E++
Sbjct: 234 SALIAAFGKLGRDDSAISLFDEMKENG-LHPTAKIYTTILGIYFKLGRVEKALGLVQEMK 292
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKD 177
+ + Y LI G+ G + E Y I+ ++ P+ I+ N+I +L
Sbjct: 293 EKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLIN--NLINLLGKAGR 350
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGA-YAKEGRLENAEELKERARRRGADPNAKTWE 236
L A K F+E ES T ++ N +I A + + R A E+ + G P++ T+
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
I D + + ++ A+ LE+ + G + P + + + K + A
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKG------FAPCPAAYCSLINALGKAKRYEAANELF 464
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
+ L++ V+ +I+ GR S
Sbjct: 465 QELRENCGYSSARVYAVMIKHLGKCGRLS 493
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 108/280 (38%), Gaps = 37/280 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A +L ++MKE L ++ + +++ +Y K G EK ++QEMK YTY
Sbjct: 247 DSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTEL 306
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + + A + M ++G D +NL ++ +AG A + +E+E+
Sbjct: 307 IKGVGKAGKVEEAYSIFMNMLKEG-CKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQ 365
Query: 123 AHRDLSAYQFLI-TLYGQTGNLSEVYRIWRSLRL---------------AFPNTANI--- 163
++ Y +I L+ SE + + ++ F T +
Sbjct: 366 CTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKA 425
Query: 164 -----------------SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
+Y ++I L K A + F+E C RV VMI
Sbjct: 426 LLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKH 485
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
K GRL A +L ++ G +P+ + +R G
Sbjct: 486 LGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVG 525
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +MK+L +N+LM+ + G ++ ++++ M+ + PD ++N+ + A
Sbjct: 498 LFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFA 557
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
GA + MK + ++ D +++ + AG+FE+A + +KE+ ++ DL
Sbjct: 558 RTGGPKGAIEMFTRMK-NSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDL 616
Query: 128 SAYQFLITLYGQ 139
Y ++ G+
Sbjct: 617 ITYSSILEAVGK 628
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT++A +LL M+E N ++ +A+TG P+ + MK S I PD +YN
Sbjct: 526 MTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYN 585
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 98
+ L+ A ++++EM G D T+S++
Sbjct: 586 TVLGCLSRAGMFEEAAKLMKEMNSKG-FEYDLITYSSI 622
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 130/307 (42%), Gaps = 11/307 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++L M+ +++ +N+L+ + + G ++ ++ M+ + P+ T+N
Sbjct: 174 KEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSV 233
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A +V +EM ++G +A D +++ L Y + G +A E+ +
Sbjct: 234 VNGICKAGRMEDARKVFDEMVKEG-LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + LI + + GNL + R +R I++ +I L A
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDAL 352
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+E + N +I Y GR++ A EL +G P+ T+ Y
Sbjct: 353 LAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAY 412
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+NGD A ++ ++ G +P + T + +R +EK + A +L K
Sbjct: 413 CKNGDTHSAFQLNQQMLENG------VLPDAITYSSLIRVLCEEKRLGDA----HVLFKN 462
Query: 303 VDDLGVE 309
+ LG++
Sbjct: 463 MISLGLQ 469
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 111/245 (45%), Gaps = 18/245 (7%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L + M L L + + SL+ + K G+ E+ ++ EM + ++PD TY+V +
Sbjct: 456 AHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLIN 515
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAAD--------WTTFSNLASI------YVEAGLFEK 110
L+ A+R++ ++ + V A+ + L S+ + GL +
Sbjct: 516 GLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNE 575
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAF-PNTANISYLNM 168
A++ + + +RN + D S Y LI + + GN+ + + L+ F PN+ S +++
Sbjct: 576 ADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNST--STISL 633
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
I+ L + A++ ++ + C+ D + +I KEG ++ ++ R G
Sbjct: 634 IRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGL 693
Query: 229 DPNAK 233
P+ +
Sbjct: 694 LPSPR 698
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Query: 171 VLVNLKD--LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
VL+ L D LP A + F S ++ N+++ A G + A + R G
Sbjct: 129 VLLALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGC 188
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
DPNA T+ + R G+ VD E+ +D R G K P+ T + + +
Sbjct: 189 DPNAVTYNTLVAAFCRAGE----VDRAERLVDMMREGGLK--PNLVTFNSVVNGICKAGR 242
Query: 289 V-DGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ D + F E++K+ + GV + L+ Y G
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVS-YNTLVGGYCKVG 276
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 15/301 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A AL+++M E P+ +++ K G E ++ +M+ + I YN +
Sbjct: 28 QALALVDRMVEE----GHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAII 83
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L A+ + EM G + D T+S + + +G + AE+ L+++ R
Sbjct: 84 DRLCKDGHHIHAQNLFTEMHDKG-IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ D+ + LI + G +SE I+ + R FP T I+Y +MI L A
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT--ITYNSMIDGFCKQDRLNDA 200
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ S + D+ + +I Y K R++N E+ RRG N T+
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ + GD+ A D L I +G P+ T ++ + +K++ A LE L+K
Sbjct: 261 FCQVGDLDAAQDLLNVMISSG------VAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Query: 302 A 302
+
Sbjct: 315 S 315
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 139/332 (41%), Gaps = 24/332 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A A+ ++ LG +N+L+ ++K G +K + +M S+ PD TYN
Sbjct: 46 ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 105
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L ++ +ERV+E+M D + + T+++L Y AG+++++ R KE+ +
Sbjct: 106 IDGLCKTKEMVKSERVLEQMV-DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSG 164
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ I + + E I+ S+ L P ISY ++ AE
Sbjct: 165 LIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGY-------AAE 217
Query: 183 KCFKEWESGC-------ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
CF S + R N++I AYA+ G ++ A + E + +G P+ T+
Sbjct: 218 GCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 277
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI-RTFMRHFEQEKD-VDGAE 293
R G + A+ +D G VP SE + R ++ + V E
Sbjct: 278 ATVISSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYRCLIQGCCNHGELVKAKE 330
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
E++ K + GV+ F +I GR +
Sbjct: 331 LISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 362
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 117/290 (40%), Gaps = 41/290 (14%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K+E +LE+M + + ++ +NSL+ Y+ G ++ + +EM +S ++P N ++
Sbjct: 117 KSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFI 176
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
AL N I A+ + + M G + ++S L Y G F + + ++
Sbjct: 177 HALCRHNRIKEAKDIFDSMVLKGP-KPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGI 235
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL--- 178
+ + LI Y + G + + I+ + + P+T +++ +I L + L
Sbjct: 236 VPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT--VTFATVISSLCRIGRLDDA 293
Query: 179 ------------PGAEKCFKEWESGCATY----------------DIRVTNV-----MIG 205
P +E ++ GC + DI V +I
Sbjct: 294 LHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 353
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
KEGR+ +++ + + G PN T+ + Y G+M+ A+ L
Sbjct: 354 NLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYL 403
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P +TYN+
Sbjct: 457 TDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNL 516
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A+ + +++ GR A D +++ + ++ KA L ++
Sbjct: 517 MISNLIKEESYEEADNLFISVEKSGR-APDSRLLNHIVRMLLKKAEVAKASNYLSIIDEN 575
Query: 122 NAHRDLSAYQFLITLYGQ 139
N + S L +L+ +
Sbjct: 576 NLTLEASTISLLASLFSR 593
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L EKM + +++ + SL+ + K G E I +EM PD N +M
Sbjct: 500 AYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMD 559
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ +I + EE+K G + D ++S L V+ G + + E++ + H
Sbjct: 560 CVFKAGEIEKGRALFEEIKAQG-LTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLH 618
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D AY +I + ++G +++ Y++ ++ ++Y ++I L + L A
Sbjct: 619 LDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYML 678
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F+E +S ++ V + +I + K GR++ A + E ++G PN TW D ++
Sbjct: 679 FEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVK 738
Query: 245 NGDMKLAVDCLE 256
++ A+ C +
Sbjct: 739 AEEIDEALVCFQ 750
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 137/332 (41%), Gaps = 44/332 (13%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL +M+E+ + F +L+ ++A+ G + +++ EMK++S D YNV +
Sbjct: 224 LLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFG 283
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
V + A + E+K G V D TF+++ + +A ++A +EL++ + +
Sbjct: 284 KVGKVDMAWKFFHELKSQGLVPDD-VTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCV 342
Query: 128 SAYQFLITLYGQTGNLSEVY-----------------------------------RIWRS 152
AY +I YG G +E Y RI +
Sbjct: 343 YAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEA 402
Query: 153 LRL-AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
+++ A PN SY +I +L +L A K + +I N+MI K
Sbjct: 403 MKMDAAPNLT--SYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQ 460
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 271
RL+ A + + P++ T+ D R+G + A EK +D+G+ V
Sbjct: 461 RLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNA--VV 518
Query: 272 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ IR F + +E DG + + E++ +
Sbjct: 519 YTSLIRNFFKCGRKE---DGHKIYKEMMHRGC 547
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 1/254 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E E +LE+M G S+ ++ + K+ + +I+ M+ P Y
Sbjct: 149 EYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTL 208
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL+A ++ ++ +M+ G F+ L ++ G + A L E+++ +
Sbjct: 209 IGALSAAHEADPMLTLLRQMQEIG-YEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNS 267
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ DL Y I +G+ G + ++ + L+ ++++ +MI VL + + A
Sbjct: 268 FNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAV 327
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+E +S + + N MI Y G+ A L ER +R+G P+ +
Sbjct: 328 ELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCL 387
Query: 243 LRNGDMKLAVDCLE 256
R G ++ A+ LE
Sbjct: 388 GRKGKVEEALRILE 401
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 114/263 (43%), Gaps = 7/263 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK AL E++K L ++ L+ K G + + EMK + D+ YN+
Sbjct: 568 EKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIV 627
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A +++EEMK G + T+ ++ + ++A +E +++
Sbjct: 628 IDGFCKSGKVNKAYQLLEEMKTKG-LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKA 686
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y LI +G+ G + E Y I L + PNT ++ ++ LV +++
Sbjct: 687 VDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNT--YTWNCLLDALVKAEEIDE 744
Query: 181 AEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A CF+ ++ C ++ + +M+ K + A + +++G PN T+
Sbjct: 745 ALVCFQNMKNLKCPPNEVTYS-IMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 803
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
R G++ A D E+ +G
Sbjct: 804 SGLARVGNVLEAKDLFERFKSSG 826
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA LLE+MK L + + + S++ AK ++ + +E K+ ++ + Y+ +
Sbjct: 639 KAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLI 698
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V I A ++EE+ + G + + T++ L V+A ++A + ++N
Sbjct: 699 DGFGKVGRIDEAYLILEELMQKG-LTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKC 757
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y ++ + ++ + W+ ++ I+Y MI L + ++ A+
Sbjct: 758 PPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKD 817
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+ ++S D N MI + + +A L E R +G +KT + D
Sbjct: 818 LFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALH 877
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+ DCLE+A G
Sbjct: 878 K-------ADCLEQAAIVG 889
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 139/362 (38%), Gaps = 57/362 (15%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +LLE+ K S + +N ++T + G E+ I++ MK + P+ +YN+ +
Sbjct: 360 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILI 418
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE------ 117
L ++ A +V + MK G F N+ ++ + KA+R L E
Sbjct: 419 DMLCKAGELEAALKVQDSMKEAG-------LFPNIITVNIMIDRLCKAQR-LDEACSIFL 470
Query: 118 -LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
L+++ D + LI G+ G +++ Y ++ + + + Y ++I+
Sbjct: 471 GLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCG 530
Query: 177 DLPGAEKCFKEW-ESGCA----------------------------------TYDIRVTN 201
K +KE GC+ T D+R +
Sbjct: 531 RKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYS 590
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
++I K G ++ +L + +G + + + I D + ++G + A LE+
Sbjct: 591 ILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTK 650
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
G P+ T + + + +D A E K DL V V+ LI +
Sbjct: 651 G------LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKV 704
Query: 322 GR 323
GR
Sbjct: 705 GR 706
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E+ K + + + ++SL+ + K G ++ I++E+ + P++YT+N
Sbjct: 673 DEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCL 732
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL +I A + MK + + + T+S + + + F KA +E++ +
Sbjct: 733 LDALVKAEEIDEALVCFQNMK-NLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQG 791
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
+ Y +I+ + GN+ E ++ + + P++A Y MI+ L N
Sbjct: 792 LKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSA--CYNAMIEGLSNANKAMD 849
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENA----EELKERARRRGA 228
A F+E GC Y + V++ A K LE A L+E A+ + A
Sbjct: 850 AYILFEETRLKGCRIYS-KTCVVLLDALHKADCLEQAAIVGAVLREMAKSQHA 901
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 5/256 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K EA+ E+MK NL ++S++ Y + G+ + + E + I P+ +TY +
Sbjct: 231 KVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALI 290
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AE ++ +M+ G V + F+ + Y + +KA +E
Sbjct: 291 NGFCKIGQMEAAEMLVTDMQVRG-VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGI 349
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y L + + E + R + + PN ++SY +I + N D+ A
Sbjct: 350 ELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN--HVSYTTLISIHCNEGDMVEA 407
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F+E A + NVM+ Y K+G + AE K+ ++G P+ ++
Sbjct: 408 RRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHG 467
Query: 242 YLRNGDMKLAVDCLEK 257
+ NG + +A+ E+
Sbjct: 468 HCVNGKVDVALRLFEE 483
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 126/316 (39%), Gaps = 14/316 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL++M + +++ +NSL+ Y + +++ +++ M+ I P TY + +
Sbjct: 162 ARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L+A DI+ E V EEMK ++ D +S++ + Y AG +A E
Sbjct: 222 GLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIE 280
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y LI + + G + + +++ I + MI + A +
Sbjct: 281 PNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI 340
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E D+ N + + R++ A+ L +G PN ++ +
Sbjct: 341 KMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCN 400
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
GDM A + G+G + PS T M + ++ + AE F KK ++
Sbjct: 401 EGDMVEA----RRLFREMAGNGAE--PSLVTYNVMMDGYIKKGSIREAERF----KKEME 450
Query: 305 DLGVEVFEPLIRTYAA 320
G P I +YAA
Sbjct: 451 KKG---LVPDIYSYAA 463
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+ M+ +G + + FN+++ Y + +K I M+ I D YTYN
Sbjct: 300 EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTL 359
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L N + A+ ++ M G V + +++ L SI+ G +A R +E+
Sbjct: 360 ACGLRRANRMDEAKNLLRIMIEKG-VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
A L Y ++ Y + G++ E R + + SY ++ + A
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ F+E + + ++ +I AKEGR E A +L + G P+ +
Sbjct: 479 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 531
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 1/232 (0%)
Query: 31 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 90
Y K+G ++ EM + ++ YN + A D +++ M+ +G +
Sbjct: 153 YCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG-IEP 211
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
T++ L A K E +E++++N D+ Y +I Y + GN+ ++
Sbjct: 212 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF 271
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+Y +I + + AE + + + V N MI Y ++
Sbjct: 272 DECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRK 331
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++ A E+K + G + + T+ + R M A + L I+ G
Sbjct: 332 NMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 5/262 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E A+ LL +M + + + +N+ + K G + +++EM + + P TY+
Sbjct: 299 MWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYS 358
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A N + A + EEMK ++ D +++ + IY + G F++A KE+E+
Sbjct: 359 TMIDGCAKANLLEDALNLYEEMKLRS-ISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMES 417
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDL 178
RD+ Y L++ YG+ G EV R++ ++ +PNT ++Y MI V
Sbjct: 418 CGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNT--LTYSTMIDVYTKGGMF 475
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A +K+++ D+ +I + K G +E++ L +G PN T+
Sbjct: 476 QEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSI 535
Query: 239 SDYYLRNGDMKLAVDCLEKAID 260
D ++ ++ V +A++
Sbjct: 536 IDASRQSPTLEYGVHGSSQAVE 557
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 2/247 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTG-HPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
L M+ + + + +NSL+ AK + + EM A I+PD TYN +
Sbjct: 235 LFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVC 294
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A+ A++++ EM + G + D T++ + G + A R L+E+ +R
Sbjct: 295 ASKGMWETAQKLLSEMDQKG-IVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPT 353
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y +I + L + ++ ++L + +SY M+ + L A K
Sbjct: 354 VVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCK 413
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E ES D+ N ++ Y + G + L E + PN T+ D Y + G
Sbjct: 414 EMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGG 473
Query: 247 DMKLAVD 253
+ A+D
Sbjct: 474 MFQEAMD 480
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 15/301 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A AL+++M E P+ +++ K G E ++ +M+ + I YN +
Sbjct: 28 QALALVDRMVEE----GHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAII 83
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L A+ + EM G + D T+S + + +G + AE+ L+++ R
Sbjct: 84 DRLCKDGHHIHAQNLFTEMHDKG-IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ D+ + LI + G +SE I+ + R FP T I+Y +MI L A
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT--ITYNSMIDGFCKQDRLNDA 200
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ S + D+ + +I Y K R++N E+ RRG N T+
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ + GD+ A D L I +G P+ T ++ + +K++ A LE L+K
Sbjct: 261 FCQVGDLDAAQDLLNVMISSG------VAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Query: 302 A 302
+
Sbjct: 315 S 315
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 125/292 (42%), Gaps = 11/292 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A +L +M L +S+ +N L+ + ++ EM PD +TYN
Sbjct: 440 LLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYN 499
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L V+ I A R+ M DG VA + T++ L + G F+KA + ++
Sbjct: 500 SLIYGLCKVDRIDEAFRLFHNMLLDGAVANN-VTYNTLIHALLRRGAFQKALTLVNDMLF 558
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R D Y LI + + GN+ + ++ + + IS MI L + +
Sbjct: 559 RGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDN 618
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + ++ + DI N ++ K GR++ A L +R + G P+A T+ F
Sbjct: 619 AFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET----IRTFMRHFEQEKD 288
+ + G + A + I+ G +VPS+ T + T ++ QE +
Sbjct: 679 WQCKEGMVNDACLFFYRGIENG------FVPSNLTWNVLVYTLLKQSNQENN 724
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+++++M +P+S Y + AL+ N +S A +++EEM G D TF+++
Sbjct: 239 SLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMG-CMPDVQTFNDVIHG 297
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ A + + + R + D Y FL+ + G L+E +I +++ PN A
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL--IKIPCPNNA 355
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELK 220
++ L I V L A+ E DI N+++ KEG L A +L
Sbjct: 356 ILNTL--INGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNG 246
RRG +PN T+ I + + G
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAG 439
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEAL E+++E + +N+L+ Y KTG + ++ EM+ + + PD TY++
Sbjct: 308 THEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSL 367
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A A V++EM+ V + +S + + Y + G ++K+ + LK++++
Sbjct: 368 LIDAYAHAGRWESARIVLKEMEASN-VEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSN 426
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y +I +G+ L + + +++ +I A
Sbjct: 427 GVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMA 486
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F E + + I N+MI + ++ R E + + +G PN+ T+ D
Sbjct: 487 EELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDV 546
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y ++G A++CLE TG
Sbjct: 547 YGKSGRFSDAIECLEVLKSTG 567
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 6/259 (2%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
EA L +++ + + +N+L+ A+ G EK ++ +M+ PD Y+ ++
Sbjct: 173 EAFLLSQRQV---LTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQY 229
Query: 66 LAAVNDISGA--ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L N I +++ E++ D ++ D +++ + +AG +A R L ++
Sbjct: 230 LTRSNKIDSPILQKLYTEIETD-KIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGL 288
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ S +I G +G E ++ +R +Y +++ V L AE
Sbjct: 289 NPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEF 348
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E E D + +++I AYA GR E+A + + +PN+ + Y
Sbjct: 349 VVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYR 408
Query: 244 RNGDMKLAVDCLEKAIDTG 262
G+ + + L+ G
Sbjct: 409 DKGEWQKSFQVLKDMKSNG 427
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 139/332 (41%), Gaps = 24/332 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A A+ ++ LG +N+L+ ++K G +K + +M S+ PD TYN
Sbjct: 139 ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 198
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L ++ +ERV+E+M D + + T+++L Y AG+++++ R KE+ +
Sbjct: 199 IDGLCKTKEMVKSERVLEQMV-DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSG 257
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ I + + E I+ S+ L P ISY ++ AE
Sbjct: 258 LIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGY-------AAE 310
Query: 183 KCFKEWESGC-------ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
CF S + R N++I AYA+ G ++ A + E + +G P+ T+
Sbjct: 311 GCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 370
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI-RTFMRHFEQEKD-VDGAE 293
R G + A+ +D G VP SE + R ++ + V E
Sbjct: 371 ATVISSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYRCLIQGCCNHGELVKAKE 423
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
E++ K + GV+ F +I GR +
Sbjct: 424 LISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 455
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 118/297 (39%), Gaps = 41/297 (13%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K+E +LE+M + + ++ +NSL+ Y+ G ++ + +EM +S ++P N ++
Sbjct: 210 KSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFI 269
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
AL N I A+ + + M G + ++S L Y G F + + ++
Sbjct: 270 HALCRHNRIKEAKDIFDSMVLKGP-KPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGI 328
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL--- 178
+ + LI Y + G + + I+ + + P+T +++ +I L + L
Sbjct: 329 VPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT--VTFATVISSLCRIGRLDDA 386
Query: 179 ------------PGAEKCFKEWESGCATY----------------DIRVTNV-----MIG 205
P +E ++ GC + DI V +I
Sbjct: 387 LHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIIN 446
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEGR+ +++ + + G PN T+ + Y G+M+ A L+ G
Sbjct: 447 NLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 503
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P +TYN+
Sbjct: 594 TDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNL 653
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A+ + +++ GR A D +++ + ++ KA L ++
Sbjct: 654 MISNLIKEESYEEADNLFISVEKSGR-APDSRLLNHIVRMLLKKAEVAKASNYLSIIDEN 712
Query: 122 NAHRDLSAYQFLITLYGQTGNLSE 145
N + S L +L+ + G E
Sbjct: 713 NLTLEASTISLLASLFSREGKCRE 736
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 93/247 (37%), Gaps = 1/247 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A ALL+ M + + + + +L+ Y K G + + ++M + P S YN+
Sbjct: 490 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNII 549
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+++ EM G + T L + ++A L++L N
Sbjct: 550 LHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGL-CRNNCTDEANMLLEKLFAMN 608
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + +I+ + G E ++ ++ +Y MI L+ + A+
Sbjct: 609 VKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEAD 668
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F E D R+ N ++ K+ + A A T + + +
Sbjct: 669 NLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLF 728
Query: 243 LRNGDMK 249
R G +
Sbjct: 729 SREGKCR 735
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 9/265 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEAL E++++ + + +N+L+ Y KTG + ++ EM+ + PD +TY++
Sbjct: 322 TLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSL 381
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V++EM+ G V + FS L + Y + G ++K + LKE+++
Sbjct: 382 LIDAYVNAGRWESARIVLKEME-TGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSI 440
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y +I +G+ L + + +++ +I A
Sbjct: 441 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 500
Query: 182 EKCFKEWES----GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
E+ F+ E CAT N+MI +Y + R ++ + L + + +G PN T
Sbjct: 501 EEMFEAMERRGCLPCAT----TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 556
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTG 262
D Y ++G A++CLE+ G
Sbjct: 557 LVDVYGKSGRFNDAIECLEEMKSVG 581
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 9/320 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL + L + S+++ A +G + A+ +E++ S I P + YN +
Sbjct: 289 RALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALL 348
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AE ++ EM++ G V+ D T+S L YV AG +E A LKE+E +
Sbjct: 349 KGYVKTGPLKDAELMVSEMEKRG-VSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDV 407
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + L+ Y G + +++ + ++ Y +I L A
Sbjct: 408 QPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 467
Query: 184 CFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F S D RVT N +I + K GR AEE+ E RRG P A T+ I + Y
Sbjct: 468 TFDRMLSEGIEPD-RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 526
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
GD + D +++ + + G +P+ T T + + + + A LE +K
Sbjct: 527 ---GDQE-RWDDMKRLLGKMKSQG--ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 580
Query: 303 VDDLGVEVFEPLIRTYAAAG 322
++ LI YA G
Sbjct: 581 GLKPSSTMYNALINAYAQRG 600
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 7/244 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A++ +++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 152 AYAVVSWLQKHNLCFSYELLYSI--LIHALGRSEKLYEAFLLSQKQTLTP--LTYNALIG 207
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA--ERALKELENRN 122
A A NDI A +I M++DG +D+ +S + + +R KE+E
Sbjct: 208 ACARNNDIEKALNLISRMRQDG-YQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDK 266
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ +I + ++G+ S ++ + + + +++I L N AE
Sbjct: 267 LELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAE 326
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E + N ++ Y K G L++AE + +RG P+ T+ + D Y
Sbjct: 327 ALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAY 386
Query: 243 LRNG 246
+ G
Sbjct: 387 VNAG 390
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
LE+MK + L SS +N+L+ YA+ G E+ + M + + P N + A
Sbjct: 574 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 633
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ A V++ MK +G V D T++ L + F+K +E+
Sbjct: 634 DRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIRVDKFQKVPGVYEEM 682
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++E+A M L S + NSL+ + + + A++Q MK + + PD TY
Sbjct: 601 LSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 660
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG 86
M+AL V+ V EEM G
Sbjct: 661 TLMKALIRVDKFQKVPGVYEEMIMSG 686
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 118/281 (41%), Gaps = 7/281 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K L+++M+ L + +NS++ L K+G + +++EM I+PD+ Y
Sbjct: 27 QKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTL 86
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + +I A ++ +EM++ R+ D+ ++ + G +A++ ++ +R
Sbjct: 87 IDGFCKLGNIQAAYKLFDEMEKQ-RIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI Y ++G + + + + + + ++Y + L L + A
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E +I N ++ K G + A +L E G P+ T+ D Y
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
+ G+M A + L + +D G P+ T M F
Sbjct: 266 CKTGEMVKAHELLREMLDRG------LQPTVITFNVLMNGF 300
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 9/263 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A LL +M L + +NSL+ K+G+ + +++EM+ + + PD+ T+
Sbjct: 201 VDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTT 260
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A ++ A ++ EM G + TF+ L + + +G+ E ER L + +
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRG-LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEK 319
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFP--NTANISYLNMIQVLVNLKD 177
+ + Y L+ Y N+ I++ + R P NT NI +I+ ++
Sbjct: 320 GIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI----LIKGHCKARN 375
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ A KE N +I + K+ ++ A EL E RR G +A+ + +
Sbjct: 376 MKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNL 435
Query: 238 FSDYYLRNGDMKLAVDCLEKAID 260
F D G+M+ A++ ++AI+
Sbjct: 436 FVDISYGEGNMETALELCDEAIE 458
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E E LL M E + ++ +NSLM Y + I + M A +MPDS TYN
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG 86
+ ++ ++ A + +EM G
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKG 390
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 150/371 (40%), Gaps = 44/371 (11%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A LL +M+++ + + +N L+ + +G E+ +IQEM + +YTY+
Sbjct: 206 VQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDP 265
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R + A R+ EEM G V T++ + + G A + L + N+
Sbjct: 266 LIRGYCEKGQLDEASRLGEEMLSRGAVPT-LVTYNTIMYGLCKWGRVSDARKLLDVMVNK 324
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N DL +Y LI Y + GN+ E + ++ LR + ++Y +I L + DL A
Sbjct: 325 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVA 384
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL---------------------- 219
+ E D+ +++ + K G L A+EL
Sbjct: 385 MRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 444
Query: 220 -------------KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
+E RG P+ T+ +F D + G++K A + ++K + G
Sbjct: 445 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG---- 500
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
VP T + + + A FLE+L K + V + LI +YA GR
Sbjct: 501 --LVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP-SVVTYTVLIHSYAVRGRLK 557
Query: 326 PVMLRRLKMEK 336
+L +M +
Sbjct: 558 LAILHFFEMHE 568
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 33 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 92
K G P K + +EM A PD TYNV++ L + ++ A ++++M +G V D
Sbjct: 447 KLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV-PDH 505
Query: 93 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
T++++ ++ AG KA E+ ++ + Y LI Y G L +
Sbjct: 506 VTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFE 565
Query: 153 L--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+ + PN I+Y +I L ++ + A K F E ++ + + ++I
Sbjct: 566 MHEKGVHPNV--ITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNL 623
Query: 211 GRLENAEELKERARRRGADPNAKT 234
G + A L + R P++ T
Sbjct: 624 GHWQEALRLYKDMLDREIQPDSCT 647
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 100/271 (36%), Gaps = 41/271 (15%)
Query: 30 LYAKTGHPEKIPAIIQEMKASSIMPD---------------------------------- 55
+YAK EK + +M + ++PD
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR 187
Query: 56 --SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
TYN + + + A +++ +M++ G + D T++ L + +G E+A+
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPND-VTYNVLVNGLSHSGELEQAKE 246
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 171
++E+ Y LI Y + G L E R+ + R A P ++Y ++
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTL--VTYNTIMYG 304
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
L + A K + D+ N +I Y + G + A L R RG P+
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
T+ D R GD+ +A+ ++ I G
Sbjct: 365 VVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG 395
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L++KM L + + S++ + GH K A+ EM + I P TY V
Sbjct: 487 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVL 546
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + A EM G V + T++ L + + ++A + E++ +
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKG-VHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKG 605
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ Y LI G+ E R+++ +
Sbjct: 606 ISPNKYTYTILINENCNLGHWQEALRLYKDM 636
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 142/333 (42%), Gaps = 29/333 (8%)
Query: 4 KAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
+A+ LL M E G +P +N+++ + K G K + EM I PD TY
Sbjct: 197 QADELLRMMAEG--GAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTY 254
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N + AL + AE ++ +M G + +W T+++L Y G +++A R K++
Sbjct: 255 NCVVNALCKARAMDKAEAILRQMVDKGVLPDNW-TYNSLIYGYSSTGQWKEAVRVSKKMT 313
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------VLV 173
++ D+ L+ + G + + ++ S+ + T SY M+ LV
Sbjct: 314 SQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLV 373
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+L +L F S D + NV+I AYAK G L+ A + R +G +P+
Sbjct: 374 DLTEL------FNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVV 427
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ R G M AV+ + ID G PS T ++ F D+ A+
Sbjct: 428 TYSTVIAALCRIGKMDDAVEKFNQMIDQG------VAPSISTYHFLIQGFCTHGDLLKAK 481
Query: 294 GF-LEILKKAV-DDLGVEVFEPLIRTYAAAGRT 324
L+++ K + D+G F +I GR
Sbjct: 482 DLVLQMMNKGMRPDIG--CFNFIINNLCKLGRV 512
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 141/369 (38%), Gaps = 46/369 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+L +M + + + +NSL+ Y+ TG ++ + ++M + I+PD T N
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSL 327
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M +L I A V + M G+ +
Sbjct: 328 MASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
A D F+ L Y + G+ ++A E+ + D+ Y +I + G + +
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447
Query: 149 IWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
+ + + P+ + +L IQ DL A+ + + DI N +I
Sbjct: 448 KFNQMIDQGVAPSISTYHFL--IQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINN 505
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
K GR+ +A+ + + G PN + D Y G M+ A+ + + G
Sbjct: 506 LCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG---- 561
Query: 267 GKWVPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
P+ T + + + +D G F EIL K + ++ ++ AGRT
Sbjct: 562 --IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKP-STTLYNIILHGLFQAGRTV 618
Query: 326 PVMLRRLKM 334
P ++ +M
Sbjct: 619 PAKVKFHEM 627
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 102/274 (37%), Gaps = 6/274 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN ++ K G I + + P+ YN M V + A RV + M
Sbjct: 499 FNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMV 558
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + + L + Y + G ++ +E+ ++ + Y ++ Q G
Sbjct: 559 SAG-IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRT 617
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + + +Y ++ L A FKE + DI N+M
Sbjct: 618 VPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIM 677
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I + R+E A++L R G P+ T+ I ++ G ++ A D +
Sbjct: 678 IAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMF-----SSM 732
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G P+S+ + +R +++++ A +L
Sbjct: 733 ENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLS 766
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL ++++ L ++ +N+L++ ++ + + A+ +EM AS PD +TYN +
Sbjct: 53 LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHG 112
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AE + +E+ G D T+++L + + G E+ ER +EL +D
Sbjct: 113 RCGKAQEAELMFKELVEKG-FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 171
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +YG+ G L ++ +R ++Y ++ L + + A K +E
Sbjct: 172 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 231
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + +I AYAK GR ++AE +R G P+ + + D + R+ +
Sbjct: 232 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDE 291
Query: 248 MK 249
+
Sbjct: 292 TR 293
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+ E + E++ + + +N+++ +Y K G + + EM+A PD+ TY V
Sbjct: 152 VERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTV 211
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L ++ IS A +V+EEM D + TFS L Y ++G + AER +
Sbjct: 212 LVDSLGKMDRISEAGKVLEEMA-DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVES 270
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D AY ++ ++ ++ ++ ++R++
Sbjct: 271 GVKPDRLAYLVMLDVFARSDETRKLMVLYRAM 302
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 3/237 (1%)
Query: 28 MTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG--AERVIEEMKRD 85
M +YA++G + ++ M+ I PD ++N + A A ++ A ++ E+++
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G + D T++ L S + + A +E+ DL Y +++++G+ G E
Sbjct: 61 G-LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQE 119
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+++ L ++Y +++ D+ E+ +E D N MI
Sbjct: 120 AELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIH 179
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
Y K GRL+ A L + R G P+A T+ + D + + A LE+ D G
Sbjct: 180 MYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAG 236
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K EA+ E+MK NL ++S++ Y + G+ + + E + I P+ +TY +
Sbjct: 231 KVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALI 290
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AE ++ +M+ G V + F+ + Y + +KA +E
Sbjct: 291 NGFCKIGQMEAAEMLVTDMQVRG-VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGI 349
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y L + + E + R + + PN ++SY +I + N D+ A
Sbjct: 350 ELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN--HVSYTTLISIHCNEGDMVEA 407
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F+E A + NVM+ Y K+G + AE K ++G P+ ++
Sbjct: 408 RRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHG 467
Query: 242 YLRNGDMKLAVDCLEK 257
+ NG + +A+ E+
Sbjct: 468 HCVNGKVDVALRLFEE 483
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL++M + +++ +NSL+ Y + +++ +++ M+ I P TY + +
Sbjct: 162 ARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L+A DI+ E V EEMK ++ D +S++ + Y AG +A E
Sbjct: 222 GLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIE 280
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y LI + + G + + +++ I + MI + A +
Sbjct: 281 PNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEI 340
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E D+ N + + R++ A+ L +G PN ++ +
Sbjct: 341 KMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCN 400
Query: 245 NGDM 248
GDM
Sbjct: 401 EGDM 404
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+ M+ +G + + FN+++ Y + +K I M+ I D YTYN
Sbjct: 300 EAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTL 359
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L N + A+ ++ M G V + +++ L SI+ G +A R +E+
Sbjct: 360 ACGLRRANRMDEAKNLLRIMIEKG-VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
A L Y ++ Y + G++ E R + SY ++ + A
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ F+E + + ++ +I AKEGR E A +L + G P+ +
Sbjct: 479 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 531
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 89/232 (38%), Gaps = 1/232 (0%)
Query: 31 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 90
Y K+G ++ EM + ++ YN + A D +++ M+ +G +
Sbjct: 153 YCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG-IEP 211
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
T++ L A K E +E++++N D+ Y +I Y + GN+ ++
Sbjct: 212 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF 271
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+Y +I + + AE + + + V N MI Y ++
Sbjct: 272 DECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRK 331
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++ A E+K + G + + T+ + R M A + L I+ G
Sbjct: 332 NMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 146/370 (39%), Gaps = 43/370 (11%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
+M E+ + + N L+ Y K G E IQ+ A PD TYN ++ L +
Sbjct: 241 RMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQND 300
Query: 71 DISGAERVIEEMKRDGR----------------------------------VAADWTTFS 96
+ A +V++ M ++G D TTF+
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFN 360
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
L + E+A +++ + D+ + LI + G+ R++ ++ +
Sbjct: 361 TLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS 420
Query: 157 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLEN 215
++Y +I L +L L A K+ ES GC I N +I K+ R+E
Sbjct: 421 GCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTI-TYNTIIDGLCKKMRIEE 479
Query: 216 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 275
AEE+ ++ +G NA T+ D ++ + A + + I G P++ T
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEG------LQPNNIT 533
Query: 276 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 335
+ + H+ ++ D+ A LE + ++ V + LI AGRT V L+ L+
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQ-VALKVLRGM 592
Query: 336 KVEVSEASKK 345
+++ + K
Sbjct: 593 RIKGMRPTPK 602
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 105/275 (38%), Gaps = 38/275 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ + + + + ++ EM A I PD T+N M+AL + + A ++EEM
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 208
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G VA D TTF+ L +VE G E A R + LI Y + G +
Sbjct: 209 SRG-VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRV 267
Query: 144 --------SEVYRIWRSLRLAFPNTAN---------------------------ISYLNM 168
E+ + ++ + N +Y +
Sbjct: 268 EDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIV 327
Query: 169 IQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+ L L A+ + + GC DI N +I A RLE A +L + +G
Sbjct: 328 VNCLCKNGQLEEAKGILNQMVDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
P+ T+ I + + GD LA+ E+ ++G
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 107/273 (39%), Gaps = 11/273 (4%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-E 112
P Y +R L AV + + ++ EM+R+G S L S Y LF+ A +
Sbjct: 72 PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDS-YEGQQLFDDAVD 130
Query: 113 RALKELENR-NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQV 171
L +L+ D Y L+ + + + + ++ + +++ +++
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 172 LVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
L + A +E S G A + T +M G + +EG +E A +K R G
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQG-FVEEGSIEAALRVKARMLEMGCSA 249
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
T + + Y + G ++ A+ +++ I G + P T TF+ Q V
Sbjct: 250 TKVTVNVLINGYCKLGRVEDALGYIQQEIADG------FEPDQITYNTFVNGLCQNDHVG 303
Query: 291 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
A ++++ + D V + ++ G+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 336
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A+ L E+M+E + + S+++ ++G+ ++ + EM ++P ++TY
Sbjct: 316 EEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGAL 375
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A+ ++ EM+ G + + F+ L Y E+G+ ++A R +E +
Sbjct: 376 IHGVCKAGQMEAAQMLVNEMQGKG-IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 434
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ AY + + + E + S+ R PNT +S+ +I + +
Sbjct: 435 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT--MSFTTLIDIYCKEGNFVE 492
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A++ F+E E +I NV+I Y+K G ++ A +LK+ RG P+ T
Sbjct: 493 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC 547
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ LL M E + ++M F +L+ +Y K G+ + + +EM+ +P+ TYNV
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ A ++ +E++ G + +T S + ++ G + A + E+ R
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECID-GKVDMALKLFDEMPQRG 574
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
++ Y +I+ + G E ++++ ++
Sbjct: 575 LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMK 606
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 72/174 (41%), Gaps = 6/174 (3%)
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y I+ DL G + E ++ ++I ++ G++E A+ L E
Sbjct: 265 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEE 324
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
R +G + + + R+G++K A+ ++ D G +PS+ T +
Sbjct: 325 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG------LIPSAHTYGALIHG 378
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
+ ++ A+ + ++ DL +F LI Y +G + ++ MEK
Sbjct: 379 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 432
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 136/332 (40%), Gaps = 12/332 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE L +M++ L+ Y K G E + + E+ +++ Y+ +
Sbjct: 746 AEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKLKPELPR-----NNFVYSSMVG 800
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
AL N + A ++E+M++ G + D S L + Y +AGL E A+ +
Sbjct: 801 ALINCNQLEKAAGLVEKMRQIG-LKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIP 859
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ AY +I + G L + + SL + +Y MI V AEK
Sbjct: 860 LDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKM 919
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
FK+ +S D +V + M+ YAK G E+A +L E + RG P+ ++ D Y R
Sbjct: 920 FKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYAR 979
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
G A L + G PSS T + + + AE LE ++ A
Sbjct: 980 AGQFAKAEQLLVEMAKAG------CPPSSVTFLLLISAYAHRGKCNEAENALERMQTAAI 1033
Query: 305 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
V + ++ ++ A S M LKME+
Sbjct: 1034 RPTVRHYNEVMLAFSRARLPSQAMESYLKMER 1065
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 3/234 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+EKM+++ L S+ + L+ Y+K G E A+I + I D YN
Sbjct: 809 EKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTI 868
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++A + A + G + T+ + S++ ++G AE+ K+L++
Sbjct: 869 IKADLRAGRLKKAIDTYSSLTNLG-LRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAG 927
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y ++ Y ++G ++ +++L +SY N+I AE
Sbjct: 928 FQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAE 987
Query: 183 KCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ E ++GC + ++I AYA G+ AE ER + P + +
Sbjct: 988 QLLVEMAKAGCPPSSVTFL-LLISAYAHRGKCNEAENALERMQTAAIRPTVRHY 1040
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 136/364 (37%), Gaps = 71/364 (19%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
M +N +++LYA+ E + Q++K+SSI PD + ++ N ++ AE V+ +
Sbjct: 591 MAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQ 650
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKA----ERALKELENRNA-------------- 123
M+ G D T L + Y EA E+A E + KE E+ A
Sbjct: 651 MREKG-FTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLF 709
Query: 124 -------HR-------DLSAYQFLITLYGQTGNLSEV----------------------- 146
HR D +AY L + + G +
Sbjct: 710 DKATLLLHRVLESFTLDSAAYNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLI 769
Query: 147 --------YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
Y + L+ P N Y +M+ L+N L A ++ D
Sbjct: 770 AAYGKAGRYEVLTKLKPELPRN-NFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSV 828
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
+ ++++ AY+K G +E+A+ L AR G + + LR G +K A+D
Sbjct: 829 LVSILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSL 888
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
+ G PS +T T + F + AE + LK A +V+ ++ Y
Sbjct: 889 TNLG------LRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCY 942
Query: 319 AAAG 322
A +G
Sbjct: 943 AKSG 946
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 2/219 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A ++ M+ + + S++++Y K G ++ + QEM ++ D T++V
Sbjct: 468 ELAASIFSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVM 527
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +V+EE+ G + D T + L YV+AG E+A + K L +
Sbjct: 528 ANVRLKAGKYNEAVQVMEELLAKG-LNLDDTAWKTLLHCYVKAGNVERATKTFKTLVE-S 585
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL AY +++LY + L + +++ L+ + + + M+++ N + AE
Sbjct: 586 GIADLMAYNDMLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAE 645
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+ ++ T D ++I AY + R+E A L E
Sbjct: 646 EVLRQMREKGFTPDHITQGILINAYGEANRIEEAAGLLE 684
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 130/328 (39%), Gaps = 43/328 (13%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L E + E ++ S + + ++T+Y K G E+ + + M + PDS YN+ +
Sbjct: 365 AALLWEDLVEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLH 424
Query: 65 ALAAVNDISGAERVIEEMKRD----------------------------------GRVAA 90
L + A V M+R R
Sbjct: 425 MLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPV 484
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
D ++++ SIY +AGL+++AE+ +E+ D+ + + + + G +E ++
Sbjct: 485 DEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVM 544
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAK 209
L N + ++ ++ V ++ A K FK ESG A D+ N M+ YA+
Sbjct: 545 EELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIA--DLMAYNDMLSLYAE 602
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 269
LE+A+ L ++ + P+ + Y N +M V E+ + R G +
Sbjct: 603 FDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYC-NANM---VAAAEEVLRQMREKG--F 656
Query: 270 VPSSETIRTFMRHFEQEKDVDGAEGFLE 297
P T + + + ++ A G LE
Sbjct: 657 TPDHITQGILINAYGEANRIEEAAGLLE 684
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 129/304 (42%), Gaps = 10/304 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AEA ++M + L + F++++ YA +++ + + M + I+P S TY +
Sbjct: 295 AEAAFQEMLDQKLDPDEVAFSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLI 354
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L ++ A + E++ + V ++ + +IY + G FE+A + + +
Sbjct: 355 HLNKAERLADAALLWEDLVEES-VELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYY 413
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y ++ + G+ G E ++ +++ T+ SY M+ + A
Sbjct: 414 PDSLIYNMVLHMLGKLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASI 473
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F + + D V +I Y K G + AE+L + + KT+ + ++ L+
Sbjct: 474 FSDMQMKRCPVDEVVYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLK 533
Query: 245 NGDMKLAVDCLEKAIDTGRG-DGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKA 302
G AV +E+ + G D W +T + + + +V+ A + F +++
Sbjct: 534 AGKYNEAVQVMEELLAKGLNLDDTAW-------KTLLHCYVKAGNVERATKTFKTLVESG 586
Query: 303 VDDL 306
+ DL
Sbjct: 587 IADL 590
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 26/172 (15%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T AE + + +K ++ +M YAK+G E + + MK + P +YN
Sbjct: 913 TRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRGLRPHEVSYNN 972
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A + AE+++ EM + G TF L S Y G +AE AL+ +
Sbjct: 973 LIDAYARAGQFAKAEQLLVEMAKAG-CPPSSVTFLLLISAYAHRGKCNEAENALERM--- 1028
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-----PNTANISYLNM 168
QT + R + + LAF P+ A SYL M
Sbjct: 1029 -----------------QTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKM 1063
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/231 (17%), Positives = 96/231 (41%), Gaps = 1/231 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A+AL+ + + + +N+++ + G +K + + P TY+
Sbjct: 842 LVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQTYD 901
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A AE++ +++K G D +S + + Y ++G++E A + ++
Sbjct: 902 TMISVFAKSGRTRDAEKMFKDLKSAG-FQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKL 960
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R +Y LI Y + G ++ ++ + A +++++L +I +
Sbjct: 961 RGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNE 1020
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
AE + ++ +R N ++ A+++ A E + R G P+
Sbjct: 1021 AENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSGIQPD 1071
>gi|218192142|gb|EEC74569.1| hypothetical protein OsI_10130 [Oryza sativa Indica Group]
Length = 823
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 4/247 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKA L KM+ L +P++ +++ +AK G+ + + +EM S I D+Y Y+
Sbjct: 509 LPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYS 568
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A V D+ AE +K+ G + T +++L +Y + +A++ K L++
Sbjct: 569 ILIDAYAEVGDVQKAEAYFGLLKKAG-LCESATIYNSLIKLYTKVVYLAEAQKMYKLLKS 627
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLP 179
NA +L A +I LY + E I+ +L++ AN S+ M+ + +
Sbjct: 628 LNADTNLYASNCMIDLYSDHCMVKEAREIFENLKVT--GKANEFSHAMMVCLYKKIARFD 685
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + KE ++ N +I Y GR+E+A ++ ++ PN T++
Sbjct: 686 EAHRISKEMQASGFLTQALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDATFKALK 745
Query: 240 DYYLRNG 246
++ G
Sbjct: 746 IILVKRG 752
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 145/360 (40%), Gaps = 64/360 (17%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +M + + + FN+++ ++ K E++ ++++ M+ +PD+ TYN+
Sbjct: 270 EKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCLPDTRTYNIL 329
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +NDI AE +MK + + D + L Y G+ +A+ LKE+ RN
Sbjct: 330 ISLYREINDIDVAEYYFRKMKAEN-LLPDVVSCRTLLYGYSIKGMVTEAQALLKEMYERN 388
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANI-SYLNMIQVLVNLKDL 178
D + +Y G L + +R + + +ANI ++ +L+
Sbjct: 389 MVIDEYTQSAVTRMYVDAGMLEQAWRWFEKFNYQLNSECFSANIDAFGERGHILL----- 443
Query: 179 PGAEKCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
AEK F ++ S C V NVMI AY +L+ A E+ + R G P+
Sbjct: 444 --AEKAFMCCIKRKMLSTC------VCNVMIKAYGLVEKLDEACEIADGMERYGILPDYL 495
Query: 234 TWEIFSD------------YYLR-----------------------NGDMKLAVDCLEKA 258
T+ YYLR NG++ + VDCL +
Sbjct: 496 TYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHM-VDCLFRE 554
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
+ T +V S + + + DV AE + +LKKA ++ LI+ Y
Sbjct: 555 MITSGIQADTYVYS-----ILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLY 609
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 15/270 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH---PEK--IPAIIQEMKASSIMPD 55
M E+A EK N +S F++ + + + GH EK + I ++M ++ +
Sbjct: 408 MLEQAWRWFEK---FNYQLNSECFSANIDAFGERGHILLAEKAFMCCIKRKMLSTCVC-- 462
Query: 56 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 115
NV ++A V + A + + M+R G + D+ T+S+L + A L EKA L
Sbjct: 463 ----NVMIKAYGLVEKLDEACEIADGMERYG-ILPDYLTYSSLIHLMSTAKLPEKALYYL 517
Query: 116 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 175
++++ D Y +I+ + + GNL V ++R + + Y +I +
Sbjct: 518 RKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEV 577
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
D+ AE F + + N +I Y K L A+++ + + AD N
Sbjct: 578 GDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKMYKLLKSLNADTNLYAS 637
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
D Y + +K A + E TG+ +
Sbjct: 638 NCMIDLYSDHCMVKEAREIFENLKVTGKAN 667
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV----I 79
+N ++ + + + + EM + + PD+ TY L V+ G ER+ +
Sbjct: 144 YNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNSTYGT----LIDVHCKGGRERMALLWL 199
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK--ELEN---RNAHRDLSAYQF-- 132
+M + G + D T S + ++ +AG +EKAE K LE+ H S Y +
Sbjct: 200 GDMIKRG-LLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYSLYTYNT 258
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
LI YG+ G L +V + + + +++ MI V + + + E
Sbjct: 259 LIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQ 318
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAE 217
D R N++I Y + ++ AE
Sbjct: 319 CLPDTRTYNILISLYREINDIDVAE 343
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 74/198 (37%), Gaps = 19/198 (9%)
Query: 113 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS---LRLAFPNTANISYLNMI 169
R E+ + D S Y LI ++ + G + +W R P+ +S + +
Sbjct: 162 RLWHEMHSGGVAPDNSTYGTLIDVHCKGGR-ERMALLWLGDMIKRGLLPDEITMSIV--L 218
Query: 170 QVLVNLKDLPGAEKCFKEWE-------SGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
QV + AE FK W G Y + N +I Y K G+LE + +
Sbjct: 219 QVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQ 278
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
R G PN T+ + ++ M+ + + + +P + T +
Sbjct: 279 MLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTM------EEFQCLPDTRTYNILISL 332
Query: 283 FEQEKDVDGAEGFLEILK 300
+ + D+D AE + +K
Sbjct: 333 YREINDIDVAEYYFRKMK 350
>gi|449455312|ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
gi|449472579|ref|XP_004153637.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+LM + + G ++ I ++ S+ P+SY+Y++ M L AE + EEMK
Sbjct: 259 FNTLMDCFYRDGFAGRVKEIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMK 318
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
++ D ++ + + +AG +AE +E+E S + LI Y TG++
Sbjct: 319 MK-KLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDV 377
Query: 144 SEVYRIWRSLRLAFPNTANISYL-NMIQVLVNLKDLPGAEKCFK---EWESGCATYDIRV 199
+++ +R + N S L +I++L + L A F E+ S C T +
Sbjct: 378 DSALLVYKDMRRK-QFSLNASTLEGLIRMLCAERRLLEALDVFGFAIEYSSFCPT--MET 434
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
++I +EG++E A +L+ + RG PN K ++ F D Y + G+ ++
Sbjct: 435 FEILINELCQEGKIEGAFKLQAQMVGRGFKPNLKIYQSFIDAYTKEGNAEMV 486
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 102/262 (38%), Gaps = 17/262 (6%)
Query: 43 IIQEMKASSIMPDSYTYNVWMR----------ALAAVNDISGAERVIEE--MKRDGRVAA 90
I++ +++ I P T N + A A ++ G + IEE +K GRV+
Sbjct: 195 IVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLDCEIEEEHVKLKGRVSP 254
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
+ TF+ L + G + + +L + N+ + +Y L+T+ + E +W
Sbjct: 255 NVHTFNTLMDCFYRDGFAGRVKEIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELW 314
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+++ ++Y +I AE+ ++E E +I Y
Sbjct: 315 EEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDT 374
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
G +++A + + RR+ NA T E + A+D AI+ +
Sbjct: 375 GDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLLEALDVFGFAIEY-----SSFC 429
Query: 271 PSSETIRTFMRHFEQEKDVDGA 292
P+ ET + QE ++GA
Sbjct: 430 PTMETFEILINELCQEGKIEGA 451
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 10/263 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E AE + K+KE + +N+L+++ ++ GH E+ + EM+ ++P+ T+N
Sbjct: 97 VETAEKIFSKIKENGILPRVETYNTLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNT 156
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A V + + D + T++ L +Y A ++A E+
Sbjct: 157 LLMMHVQGGRLKEAAEVYQRI-LDAGLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRV 215
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLP 179
DL Y +I++YG+ G+ E ++R L+ PN +++ +IQ +
Sbjct: 216 GCKPDLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNV--VTWCCLIQAFGWQGKMQ 273
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
F E SGC D+ + NVM+GAY + G A L R + +G PNA +++
Sbjct: 274 EIGAFFNEMLASGCLP-DLTLYNVMMGAYGRYGHSVQAAILFRRMQAQGISPNAVSYDTM 332
Query: 239 SDYYLRN---GDMKLAVDCLEKA 258
Y + D ++ +D + +A
Sbjct: 333 IQAYCHSKQAADAQIVLDQMTRA 355
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 13/266 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+T +A L ++M + FNS++ YA+ G +K + ++M S I D T +
Sbjct: 25 LTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRMYEDMVESGIQADEITLS 84
Query: 61 VWMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + + AE++ ++K +G + T++ L S+ G E+ + E++
Sbjct: 85 TLLSGVGKTQLPVETAEKIFSKIKENG-ILPRVETYNTLLSVLSRGGHTERCKELEIEMQ 143
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
++ + L+ ++ Q G L E +++ + A ++Y ++Q+
Sbjct: 144 RLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVVTYTGLVQMYCRASKHK 203
Query: 180 GAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + F E GC D+ + ++MI Y K G E A + + + G PN TW
Sbjct: 204 EAIEVFLEMRRVGCKP-DLMIYSLMISVYGKAGSAEEAALVFRQLQNDGYIPNVVTWCCL 262
Query: 239 SDYYLRNGDMK---------LAVDCL 255
+ G M+ LA CL
Sbjct: 263 IQAFGWQGKMQEIGAFFNEMLASGCL 288
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ GR+ + T++ + + AGL +A E+ + L ++ +I Y + G
Sbjct: 2 QKGRLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLF 61
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP--GAEKCFKEWESGCATYDIRVTN 201
+ +R++ + + I+ L+ + V LP AEK F + + + N
Sbjct: 62 KKAWRMYEDMVESGIQADEIT-LSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYN 120
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
++ ++ G E +EL+ +R PN T+ +++ G +K A + ++ +D
Sbjct: 121 TLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDA 180
Query: 262 GRGDGGKWVPSSETIRTFMRHF-EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
G P+ T ++ + K + E FLE+ + + ++ +I Y
Sbjct: 181 G------LKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKP-DLMIYSLMISVYGK 233
Query: 321 AGRT--SPVMLRRLK 333
AG + ++ R+L+
Sbjct: 234 AGSAEEAALVFRQLQ 248
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 1/249 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A L++ M L +N+++ KTG + ++ EM + PD+ TYN
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 206
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + +++ AER+ +EM G V D +FS L + + G ++A + ++++N
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y LI + + G +SE ++ + ++Y ++ L K L
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 325
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A++ F E D +I Y+K+G + A L E +R P+ T+ D
Sbjct: 326 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 385
Query: 241 YYLRNGDMK 249
+ + +M+
Sbjct: 386 GFCKGSEME 394
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 5/286 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E ++ L M+E + + +N+L+ Y + G E+ ++ M + P +TYN
Sbjct: 114 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 173
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ V++EM + G ++ D T++ L AER E+ ++
Sbjct: 174 INGLCKTGKYLRAKGVLDEMLKIG-MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 232
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL ++ LI L + G L + + +R ++ A N+ Y +I + A
Sbjct: 233 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 292
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K E E GC D+ N ++ KE L A+EL RG P+ T+ +
Sbjct: 293 KVRDEMLEQGCV-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 351
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
Y ++G+M AV E I R V + I F + E EK
Sbjct: 352 YSKDGNMNKAVTLFEMMIQ--RNLKPDVVTYNTLIDGFCKGSEMEK 395
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 23/319 (7%)
Query: 12 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
+K L S NSL+ K G + I QE+ S + + YT N+ + AL
Sbjct: 53 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 112
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
I + + +M+ G V D T++ L + Y GL E+A + + + + Y
Sbjct: 113 IENTKSFLSDMEEKG-VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 171
Query: 132 FLITLYGQTGN-------LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+I +TG L E+ +I S P+TA + L +++ N ++ AE+
Sbjct: 172 AIINGLCKTGKYLRAKGVLDEMLKIGMS-----PDTATYNIL-LVECCRN-DNMMDAERI 224
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F E S D+ + +IG +K G L+ A + + G P+ + I + R
Sbjct: 225 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR 284
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAV 303
NG M A+ ++ ++ G V T T + +EK + A E F E+ ++ V
Sbjct: 285 NGVMSEALKVRDEMLEQG------CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338
Query: 304 DDLGVEVFEPLIRTYAAAG 322
F LI Y+ G
Sbjct: 339 FP-DFYTFTTLINGYSKDG 356
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A+ L +M E + F +L+ Y+K G+ K + + M ++ PD TYN
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 381
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ +++ + +M R+ + ++ L + Y G +A R E+
Sbjct: 382 TLIDGFCKGSEMEKVNELWNDMISR-RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 440
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + ++ Y + GN + ++ L I+Y +I + +++
Sbjct: 441 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 500
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E+ D+ NV++ ++++GR++ AE + + RG +P+ T+ +
Sbjct: 501 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 560
Query: 241 YYLRNGDMKLA 251
++ ++K A
Sbjct: 561 GHVTQNNLKEA 571
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 150/370 (40%), Gaps = 43/370 (11%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
+M E+ + + N L+ Y K G E IQ+ A+ PD TYN ++ L
Sbjct: 245 RMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNG 304
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
+ A +V++ M ++G D T++ + + + G E+A+ L ++ R D++ +
Sbjct: 305 HVGHALKVMDVMVQEGH-DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTF 363
Query: 131 QFLI-------------------TLYG----------------QTGNLSEVYRIWRSLRL 155
LI TL G + G+ R++ ++
Sbjct: 364 NTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKS 423
Query: 156 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 215
+ ++Y +I L +L L A KE ES N +I K+ R+E
Sbjct: 424 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEE 483
Query: 216 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 275
AEE+ ++ +G NA T+ D ++ + A + + I G P++ T
Sbjct: 484 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG------LQPNNIT 537
Query: 276 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKME 335
+ + H+ ++ D+ A L+ + ++ V + LI AGRT V L+ L+
Sbjct: 538 YNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQ-VALKLLRGM 596
Query: 336 KVEVSEASKK 345
+++ A+ K
Sbjct: 597 RIKGMRATPK 606
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 106/275 (38%), Gaps = 38/275 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ + + + + + EM I PD T+N M+AL + + A ++EEM
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKA-------------------------------- 111
G VA D TTF+ L +VE G + A
Sbjct: 213 SSG-VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRV 271
Query: 112 ERALKELENRNAH---RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 168
E AL ++ A+ D Y + Q G++ ++ + + +Y +
Sbjct: 272 EDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIV 331
Query: 169 IQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+ L L A+ + E GC DI N +I A RLE A +L + +G
Sbjct: 332 VNCLCKNGQLEEAKGILNQMVERGCLP-DITTFNTLIVALCSGNRLEEALDLARQVTLKG 390
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
P+ T+ I + + GD +LA+ E+ +G
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG 425
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 111/235 (47%), Gaps = 5/235 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A+ L E+M+E + + S+++ ++G+ ++ + EM ++P ++TY
Sbjct: 312 EEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGAL 371
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A+ ++ EM+ G + + F+ L Y E+G+ ++A R +E +
Sbjct: 372 IHGVCKAGQMEAAQMLVNEMQGKG-IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKG 430
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ AY + + + E + S+ R PNT +S+ +I + +
Sbjct: 431 LESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT--MSFTTLIDIYCKEGNFVE 488
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A++ F+E E +I NV+I Y+K G ++ A +LK+ RG P+ T
Sbjct: 489 AKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC 543
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ LL M E + ++M F +L+ +Y K G+ + + +EM+ +P+ TYNV
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ A ++ +E++ G + +T S + ++ G + A + E+ R
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECID-GKVDMALKLFDEMPQRG 570
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
++ Y +I+ + G E ++++ ++
Sbjct: 571 LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMK 602
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 72/174 (41%), Gaps = 6/174 (3%)
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y I+ DL G + E ++ ++I ++ G++E A+ L E
Sbjct: 261 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEE 320
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
R +G + + + R+G++K A+ ++ D G +PS+ T +
Sbjct: 321 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG------LIPSAHTYGALIHG 374
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
+ ++ A+ + ++ DL +F LI Y +G + ++ MEK
Sbjct: 375 VCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEK 428
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 9/265 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEAL E++++ + + +N+L+ Y KTG + +++ EM+ + PD +TY++
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 379
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V++EM+ G V + FS L + + + G ++K + LKE+++
Sbjct: 380 LIDAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y +I +G+ L + + +++ +I A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 182 EKCFKEWES----GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
E+ F+ E CAT N+MI +Y + R ++ + L + + +G PN T
Sbjct: 499 EEMFEAMERRGCLPCAT----TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 554
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTG 262
D Y ++G A++CLE+ G
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVG 579
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 9/320 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA LL + L + S+++ A +G + A+ +E++ S I P + YN +
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AE ++ EM++ G V+ D T+S L YV AG +E A LKE+E +
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + L+ + G + +++ + ++ Y +I L A
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 184 CFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F S D RVT N +I + K GR AEE+ E RRG P A T+ I + Y
Sbjct: 466 TFDRMLSEGIEPD-RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 524
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
GD + D +++ + + G +P+ T T + + + + A LE +K
Sbjct: 525 ---GDQE-RWDDMKRLLGKMKSQG--ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 578
Query: 303 VDDLGVEVFEPLIRTYAAAG 322
++ LI YA G
Sbjct: 579 GLKPSSTMYNALINAYAQRG 598
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 7/244 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A++ +++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 150 AYAVVSWLQKHNLCFSYELLYSI--LIHALGRSEKLYEAFLLSQKQTLTP--LTYNALIG 205
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE--RALKELENRN 122
A A NDI A +I +M++DG +D+ +S + + + R KE+E
Sbjct: 206 ACARNNDIEKALNLIAKMRQDG-YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDK 264
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ +I + ++G+ S+ ++ + + + +++I L + AE
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E R N ++ Y K G L++AE + +RG P+ T+ + D Y
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 243 LRNG 246
+ G
Sbjct: 385 VNAG 388
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
LE+MK + L SS +N+L+ YA+ G E+ + M + + P N + A
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ A V++ MK +G V D T++ L + F+K +E+
Sbjct: 632 DRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++E+A M L S + NSL+ + + + A++Q MK + + PD TY
Sbjct: 599 LSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 658
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG 86
M+AL V+ V EEM G
Sbjct: 659 TLMKALIRVDKFQKVPVVYEEMIMSG 684
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 147/372 (39%), Gaps = 44/372 (11%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A LL +M+ + + + +N L+ + +G E+ +IQ+M + YTY+
Sbjct: 217 MVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYD 276
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+R I A R+ EEM G V T++ + + G A + L + N
Sbjct: 277 PLIRGYCEKGQIEEASRLGEEMLSRGAVPT-VVTYNTIMYGLCKWGRVSDARKLLDVMVN 335
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+N DL +Y LI Y + GN+ E + ++ LR + ++Y +I L L DL
Sbjct: 336 KNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDV 395
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL--------------------- 219
A + E D+ + + K G L A+EL
Sbjct: 396 AMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIV 455
Query: 220 --------------KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
+E RG P+ T+ +F D + G++K A + ++K + G
Sbjct: 456 GELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG--- 512
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
VP T + + + A FLE+L K + V + LI +YA GR
Sbjct: 513 ---LVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFP-SVVTYTVLIHSYAVRGRL 568
Query: 325 SPVMLRRLKMEK 336
+L +M +
Sbjct: 569 KLAILHFFEMHE 580
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 8/233 (3%)
Query: 33 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 92
K G P K + +EM A PD TYNV++ L + ++ A ++++M +G V D
Sbjct: 459 KLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV-PDH 517
Query: 93 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
T++++ ++ AG KA E+ ++ + Y LI Y G L +
Sbjct: 518 VTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFE 577
Query: 153 L--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+ + PN I+Y +I L ++ + A F E ++ + + ++I
Sbjct: 578 MHEKGVHPNV--ITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNL 635
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL-AVDCLEKAIDTG 262
G + A L + R P++ T + N D KL V LE I G
Sbjct: 636 GHWQEALRLYKDMLDREIQPDSCTHRSLLKHL--NKDYKLHVVRHLENVIAAG 686
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L++KM L + + S++ + GH K A+ EM + I P TY V
Sbjct: 499 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVL 558
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + A EM G V + T++ L + + ++A E++ +
Sbjct: 559 IHSYAVRGRLKLAILHFFEMHEKG-VHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG 617
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ Y LI G+ E R+++ +
Sbjct: 618 ISPNKYTYTILINENCNLGHWQEALRLYKDM 648
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 118/309 (38%), Gaps = 15/309 (4%)
Query: 21 SMP-----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISG 74
SMP + L+ +Y K EK + +M + ++PD N +R L N+I
Sbjct: 126 SMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDV 185
Query: 75 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
A V M G + T++ + + + G+ ++A + L +++ + Y L+
Sbjct: 186 AREVYNVMVECG-ICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLV 244
Query: 135 TLYGQTGNLSEVYRIWRS-LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 193
+G + + + + LRL + +Y +I+ + A + +E S A
Sbjct: 245 NGLSHSGEMEQAKELIQDMLRLGL-EVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGA 303
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
+ N ++ K GR+ +A +L + + P+ ++ Y R G++
Sbjct: 304 VPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG---- 359
Query: 254 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 313
E + PS T T + + D+D A + + K D V F
Sbjct: 360 --EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTT 417
Query: 314 LIRTYAAAG 322
+R + G
Sbjct: 418 FVRGFCKMG 426
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L++M+E + + +NSL+ +K ++ + + EM + PD++TY ++
Sbjct: 477 VLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYI 536
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ + A++ ++EM G V + + L + Y + G +A A + + + D
Sbjct: 537 EAGEFASADKYVKEMLECG-VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDA 595
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+ + G +++ I+ +R SY +I L ++ A F E
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
T ++ + N+++G + + G +E A+EL + +G PNA T+ D Y ++GD
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715
Query: 248 M 248
+
Sbjct: 716 L 716
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 134/326 (41%), Gaps = 19/326 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA+AL + M + + + SL+ + + + K ++ E+K +I+ YTY
Sbjct: 367 EKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTA 426
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + + D+ GA +++EM G + ++ L +++ F A R LKE+ +
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASG-CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG 485
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-----AFPNTANISYLNMIQVLVNLKD 177
D Y LI + + E RS L F A +Y I + +
Sbjct: 486 IAPDTFCYNSLIIGLSKAKKMDEA----RSFLLEMVENGFKPDA-FTYGAFISGYIEAGE 540
Query: 178 LPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A+K KE E G + T +I Y K+G++ A +G +AKT+
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTG-LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYT 599
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ + ++NG + A E+ RG G P + T + F + ++ A
Sbjct: 600 VLMNGLVKNGKVNDA----EEIFHEMRGKG--IAPDVFSYGTLIDGFSKLGNMQKASSIF 653
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAG 322
+ + +A V ++ L+ + +G
Sbjct: 654 DEMVQAGLTSNVIIYNMLLGGFCRSG 679
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 123/301 (40%), Gaps = 11/301 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA ++ ++M + L + + +N L+ + ++G EK ++ EM P++ TY
Sbjct: 647 QKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTI 706
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-- 120
+ D++ A ++ +EMK G V D ++ L ERA+ E
Sbjct: 707 IDGYCKSGDLAEAFQLFDEMKLKGLV-PDSFVYTTLVDGCCR---LNDVERAITIFETNE 762
Query: 121 RNAHRDLSAYQFLITL---YGQTGNLSE-VYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ + + LI +G+T ++ + R+ F +++Y MI L
Sbjct: 763 KGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEG 822
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+L A++ F + + ++ Y K GR + + G +P+ +
Sbjct: 823 NLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYS 882
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ + +L+ G A+ L++ D G + S T R + F + +++ AE +
Sbjct: 883 VIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKL-SISTCRALLSGFAKVGEMEVAEKVV 941
Query: 297 E 297
E
Sbjct: 942 E 942
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 8/237 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
E+A + EKM++ L + + +N ++ +Y K G KI ++ EM+++ + D +T +
Sbjct: 226 ERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCST 285
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + A + +K +G VA + T+++L ++ +AG++ +A LKE+E
Sbjct: 286 VISACGREGLLDEARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKN 344
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
N DL Y L+ Y + G E ++ + PN I+Y +I
Sbjct: 345 NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNA--ITYTTVINAYGKAGKED 402
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A F++ ESGC ++ N ++G K+ RLE ++ R G PN+ TW
Sbjct: 403 KALSFFRQMKESGCVP-NVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTW 458
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 104/255 (40%), Gaps = 9/255 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE+++ MK + ++ ++ YAK G+ I I +E+ I P +
Sbjct: 542 EAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSW----IL 597
Query: 63 MRALAAVN----DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+R L N + G ER +E + G D F+++ SI+ + ++++A L+ +
Sbjct: 598 LRTLVLANFKRRALMGMERAFQEFCKHG-YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLI 656
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
DL Y L+ +Y + G + I + ++ + +SY +I+ +
Sbjct: 657 RESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLM 716
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + E I N + Y+ +G EE+ + PN T++I
Sbjct: 717 QEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIV 776
Query: 239 SDYYLRNGDMKLAVD 253
D Y + K A+D
Sbjct: 777 VDGYCKGKKYKEAMD 791
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 122/322 (37%), Gaps = 57/322 (17%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + +MK + FN+L+ Y + G + + +EM + P TYN
Sbjct: 470 MHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYN 529
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ALA D AE VI +MK G + T++S + + Y + G E+ +E+ N
Sbjct: 530 ALLNALARRGDWEAAESVILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYN 588
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD--L 178
++ W LR VL N K L
Sbjct: 589 -----------------------GHIFPSWILLRTL--------------VLANFKRRAL 611
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
G E+ F+E+ D+ + N M+ +AK + A E+ R G P+ T+
Sbjct: 612 MGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSL 671
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGK--WVPSSETIRTFMRHFEQEKDVDGAEGFL 296
D Y R G+ + L K I + GGK V + I+ F R +G +
Sbjct: 672 MDMYARGGECWKGEEIL-KGI---QKSGGKPDLVSYNTVIKGFCR-----------QGLM 716
Query: 297 EILKKAVDDLGVEVFEPLIRTY 318
+ + + ++ + P I TY
Sbjct: 717 QEAIRTLSEMTISGIRPCIVTY 738
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 3/248 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A ++K + +NSL+ ++ K G + +I++EM+ ++ PD TYN
Sbjct: 295 LLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYN 354
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A I+ M R G + + T++ + + Y +AG +KA ++++
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKG-IMPNAITYTTVINAYGKAGKEDKALSFFRQMKE 413
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y ++ + G+ L E+ + +R ++++ M+ + N
Sbjct: 414 SGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKY 473
Query: 181 AEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
+ F+E +S C R T N +IGAY + G + ++ E + G P T+
Sbjct: 474 VNRVFREMKS-CGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALL 532
Query: 240 DYYLRNGD 247
+ R GD
Sbjct: 533 NALARRGD 540
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 107/260 (41%), Gaps = 2/260 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++L++M++ N + +N L+ Y + G E+ I M IMP++ TY +
Sbjct: 333 EALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVI 392
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A A +MK G V + T++ + + + E+ L ++ +
Sbjct: 393 NAYGKAGKEDKALSFFRQMKESGCV-PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGC 451
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + ++ + G G V R++R ++ ++ +I K
Sbjct: 452 APNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVK 511
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
++E T + N ++ A A+ G E AE + + +G PN ++ + + Y
Sbjct: 512 MYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYA 571
Query: 244 RNGDMKLAVDCLEKAIDTGR 263
+ G+ + ++ +E+ I G
Sbjct: 572 KGGNGR-GIEKIEEEIYNGH 590
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/223 (17%), Positives = 89/223 (39%), Gaps = 1/223 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ A+ G E ++I +MK+ P+ +Y++ + A + G E++ EE+
Sbjct: 528 YNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI- 586
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + W L + ERA +E DL + +++++ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMY 646
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + R +R + ++Y +++ + + E+ K + D+ N +
Sbjct: 647 DRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTV 706
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
I + ++G ++ A G P T+ F Y G
Sbjct: 707 IKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 93/241 (38%), Gaps = 43/241 (17%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV----NDISGAERVIEE 81
+++ Y++ G E+ + ++M+ + + P TYNV + + N I G +++E
Sbjct: 214 TILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILG---LLDE 270
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M+ +G + D T S + S GL ++A + L++ Y L+ ++G+ G
Sbjct: 271 MRSNG-LEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAG 329
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
SE I KE E D+ N
Sbjct: 330 IYSEALSI-----------------------------------LKEMEKNNCPPDLVTYN 354
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
++ AY + G E + + R+G PNA T+ + Y + G A+ + ++
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 262 G 262
G
Sbjct: 415 G 415
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 8/237 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
E+A + EKM++ L + + +N ++ +Y K G KI ++ EM+++ + D +T +
Sbjct: 226 ERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCST 285
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + A + +K +G VA + T+++L ++ +AG++ +A LKE+E
Sbjct: 286 VISACGREGLLDEARKFFARLKSEGYVAGTF-TYNSLLQVFGKAGIYSEALSILKEMEKN 344
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
N DL Y L+ Y + G E ++ + PN I+Y +I
Sbjct: 345 NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNA--ITYTTVINAYGKAGKED 402
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A F++ ESGC ++ N ++G K+ RLE ++ R G PN+ TW
Sbjct: 403 KALSFFRQMKESGCVP-NVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTW 458
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 104/255 (40%), Gaps = 9/255 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE+++ MK + ++ ++ YAK G+ I I +E+ I P +
Sbjct: 542 EAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSW----IL 597
Query: 63 MRALAAVN----DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+R L N + G ER +E + G D F+++ SI+ + ++++A L+ +
Sbjct: 598 LRTLVLANFKRRALMGMERAFQEFCKHG-YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLI 656
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
DL Y L+ +Y + G + I + ++ + +SY +I+ +
Sbjct: 657 RESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLM 716
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + E I N + Y+ +G EE+ + PN T++I
Sbjct: 717 QEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIV 776
Query: 239 SDYYLRNGDMKLAVD 253
D Y + K A+D
Sbjct: 777 VDGYCKGKKYKEAMD 791
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 122/322 (37%), Gaps = 57/322 (17%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + +MK + FN+L+ Y + G + + +EM + P TYN
Sbjct: 470 MHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYN 529
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ALA D AE VI +MK G + T++S + + Y + G E+ +E+ N
Sbjct: 530 ALLNALARRGDWEAAESVILDMKSKG-FKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYN 588
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD--L 178
++ W LR VL N K L
Sbjct: 589 -----------------------GHIFPSWILLRTL--------------VLANFKRRAL 611
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
G E+ F+E+ D+ + N M+ +AK + A E+ R G P+ T+
Sbjct: 612 MGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSL 671
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGK--WVPSSETIRTFMRHFEQEKDVDGAEGFL 296
D Y R G+ + L K I + GGK V + I+ F R +G +
Sbjct: 672 MDMYARGGECWKGEEIL-KGI---QKSGGKPDLVSYNTVIKGFCR-----------QGLM 716
Query: 297 EILKKAVDDLGVEVFEPLIRTY 318
+ + + ++ + P I TY
Sbjct: 717 QEAIRTLSEMTISGIRPCIVTY 738
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 109/248 (43%), Gaps = 3/248 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A ++K + +NSL+ ++ K G + +I++EM+ ++ PD TYN
Sbjct: 295 LLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYN 354
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A I+ M R G + + T++ + + Y +AG +KA ++++
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKG-IMPNAITYTTVINAYGKAGKEDKALSFFRQMKE 413
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y ++ + G+ L E+ + +R ++++ M+ + N
Sbjct: 414 SGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKY 473
Query: 181 AEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
+ F+E +S C R T N +IGAY + G + ++ E + G P T+
Sbjct: 474 VNRVFREMKS-CGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALL 532
Query: 240 DYYLRNGD 247
+ R GD
Sbjct: 533 NALARRGD 540
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 107/260 (41%), Gaps = 2/260 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++L++M++ N + +N L+ Y + G E+ I M IMP++ TY +
Sbjct: 333 EALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVI 392
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A A +MK G V + T++ + + + E+ L ++ +
Sbjct: 393 NAYGKAGKEDKALSFFRQMKESGCV-PNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGC 451
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + ++ + G G V R++R ++ ++ +I K
Sbjct: 452 APNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVK 511
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
++E T + N ++ A A+ G E AE + + +G PN ++ + + Y
Sbjct: 512 MYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYA 571
Query: 244 RNGDMKLAVDCLEKAIDTGR 263
+ G+ + ++ +E+ I G
Sbjct: 572 KGGNGR-GIEKIEEEIYNGH 590
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/223 (17%), Positives = 89/223 (39%), Gaps = 1/223 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ A+ G E ++I +MK+ P+ +Y++ + A + G E++ EE+
Sbjct: 528 YNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEI- 586
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + W L + ERA +E DL + +++++ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMY 646
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + R +R + ++Y +++ + + E+ K + D+ N +
Sbjct: 647 DRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTV 706
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
I + ++G ++ A G P T+ F Y G
Sbjct: 707 IKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKG 749
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 93/241 (38%), Gaps = 43/241 (17%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV----NDISGAERVIEE 81
+++ Y++ G E+ + ++M+ + + P TYNV + + N I G +++E
Sbjct: 214 TILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILG---LLDE 270
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M+ +G + D T S + S GL ++A + L++ Y L+ ++G+ G
Sbjct: 271 MRSNG-LEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAG 329
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
SE I KE E D+ N
Sbjct: 330 IYSEALSI-----------------------------------LKEMEKNNCPPDLVTYN 354
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
++ AY + G E + + R+G PNA T+ + Y + G A+ + ++
Sbjct: 355 ELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 262 G 262
G
Sbjct: 415 G 415
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 2/245 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKA + ++MK ++ F ++ +Y K P + EMK+ P+ TY
Sbjct: 63 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 122
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A AE V EEM++ G D ++ L Y AGL + A +++
Sbjct: 123 LVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM 181
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D ++Y L+ YG+ G + ++ L+ + S++ ++ +
Sbjct: 182 GCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRC 241
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ + T D N M+ AYA+ GRL++ E L RRG D + T+ + +
Sbjct: 242 EEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVNA 300
Query: 242 YLRNG 246
Y R G
Sbjct: 301 YGRAG 305
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 113/294 (38%), Gaps = 8/294 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ +MK + + + +L+ +A+ G EK + +EM+ + PD Y YN M A +
Sbjct: 104 VFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYS 163
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
GA + M+ G D +++ L Y AGL E AE +EL+ R +
Sbjct: 164 RAGLPQGASEIFSLMQHMG-CEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTM 222
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
++ L+ + ++GN + + L + + M+ L E+ F
Sbjct: 223 KSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAA 282
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
E D+ NV + AY + G + E RG + TW Y R +
Sbjct: 283 MERR-GDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKE 341
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
V +E+ +D G P + T R + E+ V+ + + K
Sbjct: 342 YGRCVGMVEEMVDAG------CYPDAGTARVLLAACSDERQVEQVTAIVRSMHK 389
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 125/298 (41%), Gaps = 12/298 (4%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+ Y G + +I EM+ I P++ YN ++ L A V + MKR+
Sbjct: 18 LLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRE- 76
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
R A+ TF+ + ++Y +A + + E+++ ++ Y L+ + + G +
Sbjct: 77 RCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKA 136
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAEKCFKEWES-GCATYDIRVTNVMI 204
++ ++ A + ++ N + + LP GA + F + GC D N+++
Sbjct: 137 EEVFEEMQQA-GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP-DRASYNILV 194
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
AY + G E+AE + E ++RG P K+ + + R+G+ + + + +G
Sbjct: 195 DAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSG-- 252
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P + + + + + +D E +++ D V + + Y AG
Sbjct: 253 ----LTPDTFALNAMLNAYARAGRLDDMERLFAAMERR-GDADVGTYNVAVNAYGRAG 305
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 1/197 (0%)
Query: 50 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 109
+ +P TY + +RA + AE VI EM+ G + + T ++ ++A E
Sbjct: 6 AQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHG-IPPNATVYNAYLDGLLKARCTE 64
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
KA + ++ + + +I +YG+ +++ ++ +Y ++
Sbjct: 65 KAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALV 124
Query: 170 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
AE+ F+E + D+ N ++ AY++ G + A E+ + G +
Sbjct: 125 NAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCE 184
Query: 230 PNAKTWEIFSDYYLRNG 246
P+ ++ I D Y R G
Sbjct: 185 PDRASYNILVDAYGRAG 201
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 16/319 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A +LL++MK +L + +N + + K G + EMK+ +MPD TY
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L N + A + E+++++ +V + ++ + Y AG F++A L+ + +
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAY-AYNTMIMGYGSAGKFDEAYGLLERQKAK 364
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + AY ++T G+ + E RI+ + R A PN +Y +I +L L
Sbjct: 365 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVP--TYNILIDMLCREGKLNA 422
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + + E ++ N+MI K +LE A + E + PNA T+ D
Sbjct: 423 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 482
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ G + A EK +D G G + + IR+F + +E DG + + E++
Sbjct: 483 GLGKCGRVDDAYSLYEKMLDCGHVPGA--IVYTSLIRSFFKCGRKE---DGHKIYKEMVH 537
Query: 301 KAVD-DLGVEVFEPLIRTY 318
DL LI TY
Sbjct: 538 TGCSPDL------TLINTY 550
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A +L EKM + ++ + SL+ + K G E I +EM + PD N
Sbjct: 490 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+M + + + E+ G + D ++S L V+AGL + ++ +
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIP-DARSYSILIHGLVKAGLANETYELFYAMKEQ 608
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D AY +I + ++G +++ Y++ +++ ++Y ++I L + L A
Sbjct: 609 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 668
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E +S ++ V + +I + K GR++ A + E ++G PN TW D
Sbjct: 669 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728
Query: 242 YLRNGDMKLAVDCLEKAID 260
++ ++ A+ C + D
Sbjct: 729 LVKAEEINEALICFQSMKD 747
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 1/230 (0%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E +LE+M G SS L+ K+ + IIQ M+ P Y + + A
Sbjct: 145 ERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGA 204
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
L+ V + + +M+ G + F+ L ++ G + A L E+++ +
Sbjct: 205 LSEVREPDPMLILFHQMQELG-YEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDA 263
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D+ Y I +G+ G + ++ + ++ +++Y +MI VL L A + F
Sbjct: 264 DIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELF 323
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
++ E N MI Y G+ + A L ER + +G+ P+ +
Sbjct: 324 EQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAY 373
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 113/292 (38%), Gaps = 47/292 (16%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L MKE + +N+++ + K+G K +++EMK P TY + LA
Sbjct: 601 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 660
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR------ 121
++ + A + EE K +G + + +S+L + + G ++A ++EL +
Sbjct: 661 KIDRLDEAYMLFEEAKSNG-IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 719
Query: 122 -----------------------NAHRDLSA------YQFLITLYGQTGNLSEVYRIWRS 152
+ +DL Y LI + ++ + W+
Sbjct: 720 YTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQE 779
Query: 153 L-RLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+ +L PNT I+Y MI L ++ A F +++ D N MI +
Sbjct: 780 MQKLGLKPNT--ITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSA 837
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ +A L E R +G + + KT + D + +CLE+A G
Sbjct: 838 NKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK-------AECLEQAAIVG 882
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 96/236 (40%), Gaps = 5/236 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEK AL ++ + ++ L+ K G + + MK + D++ YN
Sbjct: 560 TEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 619
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ++ A +++EEMK G T+ ++ + ++A +E ++
Sbjct: 620 VIDGFCKSGKVNKAYQLLEEMKVKGH-PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 678
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPG 180
++ Y LI +G+ G + E Y I L + T N+ N ++ LV +++
Sbjct: 679 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL-MQKGLTPNVYTWNCLLDALVKAEEINE 737
Query: 181 AEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A CF+ + C I + ++I + + A + ++ G PN T+
Sbjct: 738 ALICFQSMKDLKCPPNQITYS-ILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITY 792
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++M++L L +++ + ++++ AK G+ + + KA+ +PDS +YN +
Sbjct: 772 KAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 831
Query: 64 RALAAVNDISGAERVIEEMKRDG 86
L++ N A + EE + G
Sbjct: 832 EGLSSANKAMDAYALFEETRLKG 854
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ +L+ M E+ + + + +NSLM Y+ + + M PD ++Y++ +
Sbjct: 319 EAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILI 378
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V I A+++ EM G + + +++ L + + G +A K++
Sbjct: 379 NGYCMVKRIDEAKQLFNEMIHQG-LTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGY 437
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
DL Y L+ + + G L + +R++R+++ + + Y +I + +L A K
Sbjct: 438 LPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARK 497
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F E D+++ +I KEG L+ A E + G PN ++ + +L
Sbjct: 498 LFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFL 557
Query: 244 RNGDMKLAVDCLEKAIDTG 262
++ D AV + + D G
Sbjct: 558 QHKDESRAVQLIGEMRDKG 576
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 126/321 (39%), Gaps = 18/321 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A L++KM E+ + +++L+ K + I MKA I P +Y
Sbjct: 212 TAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTS 271
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ L + + A ++ EM + D TFS L I+ + G +A+ LK +
Sbjct: 272 LIQGLCSFSRWKEASAMLNEMT-SLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEM 330
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
++ Y L+ Y + E +++ + R P+ SY +I +K +
Sbjct: 331 GVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDV--FSYSILINGYCMVKRID 388
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A++ F E T + +I A+ + G+L A EL + G P+ T+ +
Sbjct: 389 EAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLL 448
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ + + G L KA R G ++ + + T + D G L
Sbjct: 449 EGFCKQGY-------LGKAFRLFRAMQGTYLKPNLVMYTIL------IDSMCKSGNLNHA 495
Query: 300 KKAVDDLGVEVFEPLIRTYAA 320
+K +L V +P ++ Y
Sbjct: 496 RKLFSELFVHGLQPDVQIYTT 516
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/229 (18%), Positives = 94/229 (41%), Gaps = 1/229 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+L ++M+ L ++ N L+ + H + +++ ++ + P T+ + L
Sbjct: 112 SLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGL 171
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ + A + ++M G D T++ + + + G A +K++ D
Sbjct: 172 CKAGEFAQALELFDDMVARG-CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPD 230
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y LI + ++E I+ ++ + +SY ++IQ L + A
Sbjct: 231 VVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLN 290
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
E S DI +++I + KEG + A+ + + G +PN T+
Sbjct: 291 EMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITY 339
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 9/265 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEAL E++++ + + +N+L+ Y KTG + +++ EM+ + PD +TY++
Sbjct: 291 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 350
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A V++EM+ G V + FS L + + + G ++K + LKE+++
Sbjct: 351 LIDAYVNAGRWESARIVLKEMEA-GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 409
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y +I +G+ L + + +++ +I A
Sbjct: 410 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 469
Query: 182 EKCFKEWES----GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
E+ F+ E CAT N+MI +Y + R ++ + L + + +G PN T
Sbjct: 470 EEMFEAMERRGCLPCAT----TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTT 525
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTG 262
D Y ++G A++CLE+ G
Sbjct: 526 LVDVYGKSGRFNDAIECLEEMKSVG 550
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 9/320 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA LL + L + S+++ A +G + A+ +E++ S I P + YN +
Sbjct: 258 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 317
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AE ++ EM++ G V+ D T+S L YV AG +E A LKE+E +
Sbjct: 318 KGYVKTGPLKDAESMVSEMEKRG-VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 376
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + L+ + G + +++ + ++ Y +I L A
Sbjct: 377 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 436
Query: 184 CFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F S D RVT N +I + K GR AEE+ E RRG P A T+ I + Y
Sbjct: 437 TFDRMLSEGIEPD-RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 495
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
GD + D +++ + + G +P+ T T + + + + A LE +K
Sbjct: 496 ---GDQE-RWDDMKRLLGKMKSQG--ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 549
Query: 303 VDDLGVEVFEPLIRTYAAAG 322
++ LI YA G
Sbjct: 550 GLKPSSTMYNALINAYAQRG 569
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 7/244 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A++ +++ NL FS S+ L G EK+ + ++ P TYN +
Sbjct: 121 AYAVVSWLQKHNLCFSYELLYSI--LIHALGRSEKLYEAFLLSQKQTLTP--LTYNALIG 176
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE--RALKELENRN 122
A A NDI A +I +M++DG +D+ +S + + + R KE+E
Sbjct: 177 ACARNNDIEKALNLIAKMRQDG-YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDK 235
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ +I + ++G+ S+ ++ + + + +++I L + AE
Sbjct: 236 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 295
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E R N ++ Y K G L++AE + +RG P+ T+ + D Y
Sbjct: 296 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 355
Query: 243 LRNG 246
+ G
Sbjct: 356 VNAG 359
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
LE+MK + L SS +N+L+ YA+ G E+ + M + + P N + A
Sbjct: 543 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 602
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ A V++ MK +G V D T++ L + F+K +E+
Sbjct: 603 DRRDAEAFAVLQYMKENG-VKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 651
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++E+A M L S + NSL+ + + + A++Q MK + + PD TY
Sbjct: 570 LSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 629
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG 86
M+AL V+ V EEM G
Sbjct: 630 TLMKALIRVDKFQKVPVVYEEMIMSG 655
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 119/298 (39%), Gaps = 11/298 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ +MK + + + +L+ +A+ G EK + +EM+ + PD Y YN M A +
Sbjct: 299 VFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYS 358
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
GA + M+ G D +++ L + AGL ++AE A +EL+ + +
Sbjct: 359 RAGLPQGASEIFSLMEHMG-CEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTM 417
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
++ L++ + ++GN++ + L + + M+ L E+ F
Sbjct: 418 KSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAA 477
Query: 188 WESG----CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E G D NVM+ AY + G L+ E RG + TW Y
Sbjct: 478 MERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYA 537
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
R + + E+ +D G P + T + + E+ V+ + + + K
Sbjct: 538 RKKEYGQCLRVFEEMVDAG------CYPDAGTAKVLLAACSDERQVEQVKAIVRSMHK 589
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 7/250 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+EKA + ++MK+ ++ + ++ +Y K P + +EMK+ P+ TY
Sbjct: 258 SEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTA 317
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A AE V EEM++ G D ++ L Y AGL + A +E+
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 376
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D ++Y L+ +G+ G E ++ L+ S++ ++ ++
Sbjct: 377 GCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARC 436
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG-----ADPNAKTWE 236
E+ + D N M+ AY + GRL++ E L A RG P+ T+
Sbjct: 437 EEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFA-AMERGDGAIAGAPDTSTYN 495
Query: 237 IFSDYYLRNG 246
+ + Y R G
Sbjct: 496 VMVNAYGRAG 505
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 92/223 (41%), Gaps = 1/223 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ Y + + A + + +P TY + +RA + AE VI EM+
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R+G + T ++ ++A EKA + ++ + Y +I +YG+
Sbjct: 235 RNG-IPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQP 293
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
R++R ++ +Y ++ AE+ F+E + D+ N +
Sbjct: 294 MSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNAL 353
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ AY++ G + A E+ G +P+ ++ I D + R G
Sbjct: 354 MEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAG 396
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 127/311 (40%), Gaps = 24/311 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+AE ++ +M+ + ++ +N+ + K EK + Q MK ++ TY +
Sbjct: 224 HRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLM 283
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N + RV EMK G + T++ L + + GL EKAE +E++
Sbjct: 284 INVYGKANQPMSSLRVFREMKSVG-CKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 342
Query: 123 AHRDLSAYQFLITLYGQTG---NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
D+ AY L+ Y + G SE++ + + P+ A SY ++
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCE-PDRA--SYNILVDAFGRAGLHQ 399
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE F+E + ++ +++ A+A+ G + EE+ + + G P+
Sbjct: 400 EAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAML 459
Query: 240 DYYLRNG---DMKLAVDCLEKAIDTGRGDGG-KWVPSSETIRTFMRHFEQEKDVDGAEGF 295
+ Y R G DM+ +E RGDG P + T + + G G+
Sbjct: 460 NAYGRAGRLDDMERLFAAME------RGDGAIAGAPDTSTYNVMVNAY-------GRAGY 506
Query: 296 LEILKKAVDDL 306
L+ ++ A L
Sbjct: 507 LDRMEAAFRSL 517
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 99/223 (44%), Gaps = 3/223 (1%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+ Y +G + +I EM+ + I P + YN ++ L A V + MK++
Sbjct: 213 LLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKE- 271
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
R + T++ + ++Y +A + R +E+++ ++ Y L+ + + G +
Sbjct: 272 RCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKA 331
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAEKCFKEWESGCATYDIRVTNVMIG 205
++ ++ A + ++ N + + LP GA + F E D N+++
Sbjct: 332 EEVFEEMQQA-GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVD 390
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
A+ + G + AE + +++G P K+ + + R+G++
Sbjct: 391 AFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNV 433
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 1/249 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A L++ M L +N+++ KTG + ++ EM + PD+ TYN
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + +++ AER+ +EM G V D +FS L + + G ++A + ++++N
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y LI + + G +SE ++ + ++Y ++ L K L
Sbjct: 527 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSE 586
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A++ F E D +I Y K+G + A L E +R P+ T+ D
Sbjct: 587 ADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 646
Query: 241 YYLRNGDMK 249
+ + +M+
Sbjct: 647 GFCKGSEME 655
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 5/286 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E ++ L M+E + + +N+L+ Y + G E+ ++ M + P +TYN
Sbjct: 375 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 434
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ V++EM + G ++ D T++ L AER E+ ++
Sbjct: 435 INGLCKTGKYLRAKGVLDEMLKIG-MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 493
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL ++ LI L + G L + + +R ++ A N+ Y +I + A
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 553
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K E E GC D+ N ++ KE L A+EL RG P+ T+ +
Sbjct: 554 KVRDEMLEQGCX-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 612
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
Y ++G+M AV E I R V + I F + E EK
Sbjct: 613 YXKDGNMNKAVTLFEMMIQ--RNLKPDVVTYNTLIDGFCKGSEMEK 656
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 15/258 (5%)
Query: 12 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
+K L S NSL+ K G + I QE+ S + + YT N+ + AL
Sbjct: 314 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 373
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
I + + +M+ G V D T++ L + Y GL E+A + + + + Y
Sbjct: 374 IENTKSFLSDMEEKG-VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 432
Query: 132 FLITLYGQTGN-------LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+I +TG L E+ +I S P+TA + L +++ N ++ AE+
Sbjct: 433 AIINGLCKTGKYLRAKGVLDEMLKIGMS-----PDTATYNIL-LVECCRN-DNMMDAERI 485
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F E S D+ + +IG +K G L+ A + + G P+ + I + R
Sbjct: 486 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR 545
Query: 245 NGDMKLAVDCLEKAIDTG 262
NG M A+ ++ ++ G
Sbjct: 546 NGVMSEALKVRDEMLEQG 563
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 106/251 (42%), Gaps = 1/251 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A+ L +M E + F +L+ Y K G+ K + + M ++ PD TYN
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYN 642
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ +++ + +M R+ + ++ L + Y G +A R E+
Sbjct: 643 TLIDGFCKGSEMEKVNELWNDMISR-RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 701
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + ++ Y + GN + ++ L I+Y +I + +++
Sbjct: 702 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 761
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E+ D+ NV++ ++++GR++ AE + + RG +P+ T+ +
Sbjct: 762 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 821
Query: 241 YYLRNGDMKLA 251
++ ++K A
Sbjct: 822 GHVTQNNLKEA 832
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 2/245 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKA + ++MK ++ F ++ +Y K P + EMK+ P+ TY
Sbjct: 261 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 320
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A AE V EEM++ G D ++ L Y AGL + A +++
Sbjct: 321 LVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM 379
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D ++Y L+ YG+ G + ++ L+ + S++ ++ +
Sbjct: 380 GCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRC 439
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ + T D N M+ AYA+ GRL++ E L RRG D + T+ + +
Sbjct: 440 EEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVNA 498
Query: 242 YLRNG 246
Y R G
Sbjct: 499 YGRAG 503
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 113/294 (38%), Gaps = 8/294 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ +MK + + + +L+ +A+ G EK + +EM+ + PD Y YN M A +
Sbjct: 302 VFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYS 361
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
GA + M+ G D +++ L Y AGL E AE +EL+ R +
Sbjct: 362 RAGLPQGASEIFSLMQHMG-CEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTM 420
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
++ L+ + ++GN + + L + + M+ L E+ F
Sbjct: 421 KSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAA 480
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
E D+ NV + AY + G + E RG + TW Y R +
Sbjct: 481 MERR-GDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKE 539
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
V +E+ +D G P + T R + E+ V+ + + K
Sbjct: 540 YGRCVGMVEEMVDAG------CYPDAGTARVLLAACSDERQVEQVTAIVRSMHK 587
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/320 (19%), Positives = 132/320 (41%), Gaps = 10/320 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE++ + E + + L+ Y G + +I EM+ I P++ YN ++
Sbjct: 193 KAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYL 252
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L A V + MKR+ R A+ TF+ + ++Y +A + + E+++
Sbjct: 253 DGLLKARCTEKAVEVYQRMKRE-RCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGC 311
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAE 182
++ Y L+ + + G + ++ ++ A + ++ N + + LP GA
Sbjct: 312 KPNICTYTALVNAFAREGLCEKAEEVFEEMQQA-GHEPDVYAYNALMEAYSRAGLPQGAS 370
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F + D N+++ AY + G E+AE + E ++RG P K+ + +
Sbjct: 371 EIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAH 430
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R+G+ + + + +G P + + + + + +D E +++
Sbjct: 431 ARSGNATRCEEVMAQLHKSG------LTPDTFALNAMLNAYARAGRLDDMERLFAAMERR 484
Query: 303 VDDLGVEVFEPLIRTYAAAG 322
D V + + Y AG
Sbjct: 485 -GDADVGTYNVAVNAYGRAG 503
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 92/223 (41%), Gaps = 1/223 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ Y K K +I + + +P TY + +RA + AE VI EM+
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 237
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + T ++ ++A EKA + ++ + + +I +YG+
Sbjct: 238 EHG-IPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 296
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+++ ++ +Y ++ AE+ F+E + D+ N +
Sbjct: 297 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNAL 356
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ AY++ G + A E+ + G +P+ ++ I D Y R G
Sbjct: 357 MEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAG 399
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 138/301 (45%), Gaps = 10/301 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L+ KM E L +++ +N+L+ Y G +K A EM + IM TYN++
Sbjct: 303 EEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLF 362
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + A+ +I+EM+ G + D T + L + Y G ++A L E+ +
Sbjct: 363 IHALFMEGRMGDADNMIKEMREKG-MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKG 421
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L Y LI + G+ + E ++ ++ I + +I ++ A
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAF 481
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ KE ++ D N ++ Y +EG++E A +L + +RRG P+ ++ Y
Sbjct: 482 QLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGY 541
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ GDMK A ++ + TG + P+ T ++ + ++ + AE E+LK+
Sbjct: 542 SKRGDMKDAFRVRDEMMTTG------FDPTILTYNALIQGLCKNQEGEHAE---ELLKEM 592
Query: 303 V 303
V
Sbjct: 593 V 593
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL++M + + + + SL+ + K ++ A+ +++ ++PD +N
Sbjct: 408 KRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNAL 467
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +I A ++++EM + +V D T++ L Y G E+A + L E++ R
Sbjct: 468 IDGHCANGNIDRAFQLLKEMD-NMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D +Y LI+ Y + G++ + +R+ + + ++Y +IQ L ++ AE
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAE 586
Query: 183 KCFKEWESGCATYD 196
+ KE S T D
Sbjct: 587 ELLKEMVSKGITPD 600
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 36/261 (13%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+ A L +M +N+ S FN ++ + K G +K I M+ + P+ TYN
Sbjct: 197 TQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNT 256
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A RVI + +D + D T+++ S + G E+A + ++
Sbjct: 257 IIHGHCLRGKFQRA-RVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG 315
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y LI Y G+L + Y +R
Sbjct: 316 GLVPNAVTYNALIDGYCNKGDLDKAYA-YRD----------------------------- 345
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E K + TY N+ I A EGR+ +A+ + + R +G P+A T I +
Sbjct: 346 EMISKGIMASLVTY-----NLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILING 400
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y R GD K A L++ + G
Sbjct: 401 YCRCGDAKRAFGLLDEMVGKG 421
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+AL K+++ L + FN+L+ + G+ ++ +++EM ++PD TYN
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ + A ++++EMKR G + D +++ L S Y + G + A R E+
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRG-IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + + + + + +YL++I+ + + DL G +
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEGND 621
>gi|22773251|gb|AAN06857.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 769
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 4/247 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKA L KM+ L +P++ +++ +AK G+ + + +EM S I D+Y Y+
Sbjct: 509 LPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYS 568
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A V D+ AE +K+ G + T +++L +Y + +A++ K L++
Sbjct: 569 ILIDAYAEVGDVQKAEAYFGLLKKAG-LCESATIYNSLIKLYTKVVYLAEAQKTYKLLKS 627
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLP 179
NA +L A +I LY + E I+ +L++ AN S+ M+ + +
Sbjct: 628 LNADTNLYASNCMIDLYSDHCMVKEAREIFENLKVT--GKANEFSHAMMVCLYKKIARFD 685
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + K+ ++ N +I Y GR+E+A ++ ++ PN T++
Sbjct: 686 EAHRISKKMQASGFLTQALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDATFKALK 745
Query: 240 DYYLRNG 246
++ G
Sbjct: 746 IILVKRG 752
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 145/360 (40%), Gaps = 64/360 (17%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +M + + + FN+++ ++ K E++ ++++ M+ +PD+ TYN+
Sbjct: 270 EKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCLPDTRTYNIL 329
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +NDI AE +MK + + D + L Y G+ +A+ LKE+ RN
Sbjct: 330 ISLYREINDIDVAEYYFRKMKAEN-LLPDVVSCRTLLYGYSIKGMVTEAQALLKEMYERN 388
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANI-SYLNMIQVLVNLKDL 178
D + +Y G L + + + + +ANI ++ +L+
Sbjct: 389 MVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFNYQLNSECFSANIDAFGERGHILL----- 443
Query: 179 PGAEKCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
AEK F ++ S C V NVMI AY +L+ A E+ + R G P+
Sbjct: 444 --AEKAFMCCIKRKMLSTC------VCNVMIKAYGLVEKLDEACEIADGMERYGILPDYL 495
Query: 234 TWEIF------------SDYYLR-----------------------NGDMKLAVDCLEKA 258
T+ + YYLR NG++ + VDCL +
Sbjct: 496 TYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHM-VDCLFRE 554
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
+ T +V S + + + DV AE + +LKKA ++ LI+ Y
Sbjct: 555 MITSGIQADTYVYS-----ILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLY 609
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 15/270 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH---PEK--IPAIIQEMKASSIMPD 55
M E+A EK N +S F++ + + + GH EK + I ++M ++ +
Sbjct: 408 MLEQAWCWFEK---FNYQLNSECFSANIDAFGERGHILLAEKAFMCCIKRKMLSTCVC-- 462
Query: 56 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 115
NV ++A V + A + + M+R G + D+ T+S+L + A L EKA L
Sbjct: 463 ----NVMIKAYGLVEKLDEACEIADGMERYG-ILPDYLTYSSLIHLMSTAKLPEKALYYL 517
Query: 116 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 175
++++ D Y +I+ + + GNL V ++R + + Y +I +
Sbjct: 518 RKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEV 577
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
D+ AE F + + N +I Y K L A++ + + AD N
Sbjct: 578 GDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKTYKLLKSLNADTNLYAS 637
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
D Y + +K A + E TG+ +
Sbjct: 638 NCMIDLYSDHCMVKEAREIFENLKVTGKAN 667
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV----I 79
+N ++ + + + + EM + + PD+ TY L V+ G ER+ +
Sbjct: 144 YNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNSTYGT----LIDVHCKGGRERMALLWL 199
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK--ELEN---RNAHRDLSAYQF-- 132
+M + G + D T S + ++ +AG +EKAE K LE+ H S Y +
Sbjct: 200 GDMIKRG-LLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYSLYTYNT 258
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
LI YG+ G L +V + + + +++ MI V + + + E
Sbjct: 259 LIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQ 318
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAE 217
D R N++I Y + ++ AE
Sbjct: 319 CLPDTRTYNILISLYREINDIDVAE 343
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 19/198 (9%)
Query: 113 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS---LRLAFPNTANISYLNMI 169
R E+ + D S Y LI ++ + G + +W R P+ +S + +
Sbjct: 162 RLWHEMHSGGVAPDNSTYGTLIDVHCKGGR-ERMALLWLGDMIKRGLLPDEITMSIV--L 218
Query: 170 QVLVNLKDLPGAEKCFKEWE-------SGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
QV + AE FK W G Y + N +I Y K G+LE + +
Sbjct: 219 QVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQ 278
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
R G PN T+ + ++ M+ V L + ++ + +P + T +
Sbjct: 279 MLREGVSPNVVTFNTMIHVWGKHRRME-QVASLMRTMEEFQC-----LPDTRTYNILISL 332
Query: 283 FEQEKDVDGAEGFLEILK 300
+ + D+D AE + +K
Sbjct: 333 YREINDIDVAEYYFRKMK 350
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 1/249 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A L++ M L +N+++ KTG + ++ EM + PD+ TYN
Sbjct: 304 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + +++ AER+ +EM G V D +FS L + + G ++A + ++++N
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQG-VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y LI + + G +SE ++ + ++Y ++ L K L
Sbjct: 423 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 482
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A++ F E D +I Y+K+G + A L E +R P+ T+ D
Sbjct: 483 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 542
Query: 241 YYLRNGDMK 249
+ + +M+
Sbjct: 543 GFCKGSEME 551
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 5/286 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E ++ L M+E + + +N+L+ Y + G E+ ++ M + P +TYN
Sbjct: 271 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 330
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ V++EM + G ++ D T++ L AER E+ ++
Sbjct: 331 INGLCKTGKYLRAKGVLDEMLKIG-MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 389
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL ++ LI L + G L + + +R ++ A N+ Y +I + A
Sbjct: 390 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 449
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K E E GC D+ N ++ KE L A+EL RG P+ T+ +
Sbjct: 450 KVRDEMLEQGCV-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 508
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
Y ++G+M AV E I R V + I F + E EK
Sbjct: 509 YSKDGNMNKAVTLFEMMIQ--RNLKPDVVTYNTLIDGFCKGSEMEK 552
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 23/319 (7%)
Query: 12 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
+K L S NSL+ K G + I QE+ S + + YT N+ + AL
Sbjct: 210 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 269
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
I + + +M+ G V D T++ L + Y GL E+A + + + + Y
Sbjct: 270 IENTKSFLSDMEEKG-VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 328
Query: 132 FLITLYGQTGN-------LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+I +TG L E+ +I S P+TA + L +++ N ++ AE+
Sbjct: 329 AIINGLCKTGKYLRAKGVLDEMLKIGMS-----PDTATYNIL-LVECCRN-DNMMDAERI 381
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F E S D+ + +IG +K G L+ A + + G P+ + I + R
Sbjct: 382 FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCR 441
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAV 303
NG M A+ ++ ++ G V T T + +EK + A E F E+ ++ V
Sbjct: 442 NGVMSEALKVRDEMLEQG------CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495
Query: 304 DDLGVEVFEPLIRTYAAAG 322
F LI Y+ G
Sbjct: 496 FP-DFYTFTTLINGYSKDG 513
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 107/251 (42%), Gaps = 1/251 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A+ L +M E + F +L+ Y+K G+ K + + M ++ PD TYN
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYN 538
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ +++ + +M R+ + ++ L + Y G +A R E+
Sbjct: 539 TLIDGFCKGSEMEKVNELWNDMISR-RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 597
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + ++ Y + GN + ++ L I+Y +I + +++
Sbjct: 598 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 657
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E+ D+ NV++ ++++GR++ AE + + RG +P+ T+ +
Sbjct: 658 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 717
Query: 241 YYLRNGDMKLA 251
++ ++K A
Sbjct: 718 GHVTQNNLKEA 728
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL ++++ L ++ +N+L++ ++ + + A+ +EM AS PD +TYN +
Sbjct: 280 LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHG 339
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AE + +E+ G D T+++L + + G E+ ER +EL +D
Sbjct: 340 RCGKAQEAELMFKELVEKG-FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 398
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +YG+ G L ++ +R ++Y ++ L + + A K +E
Sbjct: 399 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 458
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + +I AYAK GR ++AE +R G P+ + + D + R+ +
Sbjct: 459 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDE 518
Query: 248 MK 249
+
Sbjct: 519 TR 520
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 3/262 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA--IIQEMKASSIMPDSYTYN 60
+ A LL+ M++ ++ + FN+L+ AK+G A ++ E++ + + PD+ TYN
Sbjct: 238 DDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYN 297
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + +++ A V EEM D T++ + S++ G ++AE KEL
Sbjct: 298 TLISACSQGSNLDDAVAVFEEMIA-SECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVE 356
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D Y L+ + + G++ V R+ L A I+Y MI + + L
Sbjct: 357 KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDL 416
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E + T D V++ + K R+ A ++ E G P T+
Sbjct: 417 ALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALIC 476
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y ++G A ++ +++G
Sbjct: 477 AYAKSGRQDDAERTFDRMVESG 498
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 3/247 (1%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG--A 75
G + FN++M +YA++G + ++ M+ I PD ++N + A A ++ A
Sbjct: 218 GATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVA 277
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
++ E+++ G + D T++ L S + + A +E+ DL Y +++
Sbjct: 278 LELLHEVRQAG-LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVS 336
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
++G+ G E +++ L ++Y +++ D+ E+ +E
Sbjct: 337 VHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRK 396
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D N MI Y K GRL+ A L + R G P+A T+ + D + + A L
Sbjct: 397 DGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVL 456
Query: 256 EKAIDTG 262
E+ D G
Sbjct: 457 EEMADAG 463
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 114/255 (44%), Gaps = 5/255 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+ E + E++ + + +N+++ +Y K G + + EM+A PD+ TY V
Sbjct: 379 VERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTV 438
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L ++ IS A +V+EEM D + TFS L Y ++G + AER +
Sbjct: 439 LVDSLGKMDRISEAGKVLEEMA-DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVES 497
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D AY ++ ++ ++ ++ ++R++ + Y ++ L +
Sbjct: 498 GVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 557
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E ++ E+ + +++++I A + L +RA +G +P+ K+ D
Sbjct: 558 EGVIQDMEAVFEMNPLVISSILIKAEC----ISQGASLLKRACLQGYEPDGKSLLSILDA 613
Query: 242 YLRNGDMKLAVDCLE 256
Y + G + + LE
Sbjct: 614 YEKMGKHEKGLSLLE 628
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL MKE + + + LMT Y +GHP++ ++ +K+S++ + Y+ +
Sbjct: 1045 KAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVL 1104
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 101
A D S + EMKRDG V D WT+F AS+
Sbjct: 1105 DAYLRNRDYSLGITKLLEMKRDG-VEPDHQVWTSFIRAASL 1144
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 127/340 (37%), Gaps = 44/340 (12%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+++++++L++ S ++ +AK G ++ I MKA+ +P+ + Y + + L
Sbjct: 839 VVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLC 898
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
E ++ EM+ G D + L +Y G F++ + D
Sbjct: 899 HNKRFRDVELMVAEMEGAG-FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDE 957
Query: 128 SAYQFLITLY-------------------GQTGNLSEVYRI----------WRSLRLAFP 158
Y LI +Y G T L E Y+I W L F
Sbjct: 958 DTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKL-ESYKILLAASGKAKLWEQADLLFE 1016
Query: 159 NTANISY-LN------MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
Y LN M+++ N ++ AE + I ++++ +Y G
Sbjct: 1017 EMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSG 1076
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 271
+ AE++ + + + + D YLRN D L + K ++ R DG + P
Sbjct: 1077 HPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGI---TKLLEMKR-DGVE--P 1130
Query: 272 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
+ +F+R + D A L+ L+ DL + +
Sbjct: 1131 DHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDLPIRLL 1170
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 6/267 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KA A+ E M E + + + FN+++ K G E++ I EMK +I TYN
Sbjct: 255 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 314
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + + A R +M+R G + +F+ L Y + GLF+ A E+ N
Sbjct: 315 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPY-SFNPLIEGYCKQGLFDDAWGVTDEMLN 373
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ S Y I G + + + S +A P+ +SY ++ + +
Sbjct: 374 AGIYPTTSTYNIYICALCDFGRIDDARELLSS--MAAPDV--VSYNTLMHGYIKMGKFVE 429
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F + +G I N +I + G LE A+ LKE + P+ T+
Sbjct: 430 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 489
Query: 241 YYLRNGDMKLAVDCLEKAIDTG-RGDG 266
+++NG++ +A + ++ + G + DG
Sbjct: 490 GFVKNGNLSMATEVYDEMLRKGIKPDG 516
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 80/232 (34%), Gaps = 35/232 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A+ L E+M + + + +L+ + K G+ + EM I PD Y Y
Sbjct: 463 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 522
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D A R+ EEM VA D +
Sbjct: 523 AVGELRLGDSDKAFRLHEEM-----VATD------------------------------H 547
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL+ Y I + GNL + R + +++Y +I+ + A
Sbjct: 548 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 607
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ E + V+I +AK GRLE A + ++RG PN T
Sbjct: 608 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 659
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL ++++ L ++ +N+L++ ++ + + A+ +EM AS PD +TYN +
Sbjct: 120 LLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHG 179
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AE + +E+ G D T+++L + + G E+ ER +EL +D
Sbjct: 180 RCGKAQEAELMFKELVEKG-FQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 238
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +YG+ G L ++ +R ++Y ++ L + + A K +E
Sbjct: 239 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 298
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + +I AYAK GR ++AE +R G P+ + + D + R+ +
Sbjct: 299 MADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDE 358
Query: 248 MK 249
+
Sbjct: 359 TR 360
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 3/262 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA--IIQEMKASSIMPDSYTYN 60
+ A LL+ M++ ++ + FN+L+ AK+G A ++ E++ + + PD+ TYN
Sbjct: 78 DDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYN 137
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + +++ A V EEM D T++ + S++ G ++AE KEL
Sbjct: 138 TLISACSQGSNLDDAVAVFEEMIA-SECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVE 196
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D Y L+ + + G++ V R+ L A I+Y MI + + L
Sbjct: 197 KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDL 256
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E + T D V++ + K R+ A ++ E G P T+
Sbjct: 257 ALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALIC 316
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y ++G A ++ +++G
Sbjct: 317 AYAKSGRQDDAERTFDRMVESG 338
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 7/253 (2%)
Query: 16 NLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
+L F +P FN++M +YA++G + ++ M+ I PD ++N + A A
Sbjct: 52 HLRFPHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGC 111
Query: 72 ISG--AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
++ A ++ E+++ G + D T++ L S + + A +E+ DL
Sbjct: 112 LAAGVALELLHEVRQAG-LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWT 170
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
Y +++++G+ G E +++ L ++Y +++ D+ E+ +E
Sbjct: 171 YNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELV 230
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
D N MI Y K GRL+ A L + R G P+A T+ + D + +
Sbjct: 231 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 290
Query: 250 LAVDCLEKAIDTG 262
A LE+ D G
Sbjct: 291 EAGKVLEEMADAG 303
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 114/255 (44%), Gaps = 5/255 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+ E + E++ + + +N+++ +Y K G + + EM+A PD+ TY V
Sbjct: 219 VERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTV 278
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L ++ IS A +V+EEM D + TFS L Y ++G + AER +
Sbjct: 279 LVDSLGKMDRISEAGKVLEEMA-DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVES 337
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D AY ++ ++ ++ ++ ++R++ + Y ++ L +
Sbjct: 338 GVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEI 397
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E ++ E+ + +++++I A + L +RA +G +P+ K+ D
Sbjct: 398 EGVIQDMEAVFEMNPLVISSILIKAEC----ISQGASLLKRACLQGYEPDGKSLLSILDA 453
Query: 242 YLRNGDMKLAVDCLE 256
Y + G + + LE
Sbjct: 454 YEKMGKHEKGLSLLE 468
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL MKE + + + LMT Y +GHP++ ++ +K+S++ + Y+ +
Sbjct: 885 KAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVL 944
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 101
A D S + EMKRDG V D WT+F AS+
Sbjct: 945 DAYLRNRDYSLGITKLLEMKRDG-VEPDHQVWTSFIRAASL 984
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 127/341 (37%), Gaps = 44/341 (12%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+++++++L++ S ++ +AK G ++ I MKA+ +P+ + Y + + L
Sbjct: 678 VVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLL 737
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
E ++ EM+ G D + L +Y G F++ + D
Sbjct: 738 CHNKRFRDVELMVAEMEGAG-FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPD 796
Query: 127 LSAYQFLITLY-------------------GQTGNLSEVYRI----------WRSLRLAF 157
Y LI +Y G T L E Y+I W L F
Sbjct: 797 EDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKL-ESYKILLAASGKAKLWEQADLLF 855
Query: 158 PNTANISY-LN------MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
Y LN M+++ N ++ AE + I ++++ +Y
Sbjct: 856 EEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTS 915
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
G + AE++ + + + + D YLRN D L + K ++ R DG +
Sbjct: 916 GHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGI---TKLLEMKR-DGVE-- 969
Query: 271 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVF 311
P + +F+R + D A L+ L+ DL + +
Sbjct: 970 PDHQVWTSFIRAASLCEQTDDAILLLKSLQDCGFDLPIRLL 1010
>gi|115450907|ref|NP_001049054.1| Os03g0162900 [Oryza sativa Japonica Group]
gi|108706330|gb|ABF94125.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547525|dbj|BAF10968.1| Os03g0162900 [Oryza sativa Japonica Group]
gi|222624238|gb|EEE58370.1| hypothetical protein OsJ_09514 [Oryza sativa Japonica Group]
Length = 823
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 116/247 (46%), Gaps = 4/247 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKA L KM+ L +P++ +++ +AK G+ + + +EM S I D+Y Y+
Sbjct: 509 LPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYS 568
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A V D+ AE +K+ G + T +++L +Y + +A++ K L++
Sbjct: 569 ILIDAYAEVGDVQKAEAYFGLLKKAG-LCESATIYNSLIKLYTKVVYLAEAQKTYKLLKS 627
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLP 179
NA +L A +I LY + E I+ +L++ AN S+ M+ + +
Sbjct: 628 LNADTNLYASNCMIDLYSDHCMVKEAREIFENLKVT--GKANEFSHAMMVCLYKKIARFD 685
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + K+ ++ N +I Y GR+E+A ++ ++ PN T++
Sbjct: 686 EAHRISKKMQASGFLTQALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDATFKALK 745
Query: 240 DYYLRNG 246
++ G
Sbjct: 746 IILVKRG 752
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 144/360 (40%), Gaps = 64/360 (17%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +M + + + FN+++ ++ K E++ ++++ M+ +PD+ TYN+
Sbjct: 270 EKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCLPDTRTYNIL 329
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +NDI AE +MK + + D + L Y G+ +A+ LKE+ RN
Sbjct: 330 ISLYREINDIDVAEYYFRKMKAEN-LLPDVVSCRTLLYGYSIKGMVTEAQALLKEMYERN 388
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANI-SYLNMIQVLVNLKDL 178
D + +Y G L + + + + +ANI ++ +L+
Sbjct: 389 MVIDEYTQSAVTRMYVDAGMLEQAWCWFEKFNYQLNSECFSANIDAFGERGHILL----- 443
Query: 179 PGAEKCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
AEK F ++ S C V NVMI AY +L+ A E+ + R G P+
Sbjct: 444 --AEKAFMCCIKRKMLSTC------VCNVMIKAYGLVEKLDEACEIADGMERYGILPDYL 495
Query: 234 TWEIFSD------------YYLR-----------------------NGDMKLAVDCLEKA 258
T+ YYLR NG++ + VDCL +
Sbjct: 496 TYSSLIHLMSTAKLPEKALYYLRKMQAAKLLIDCVPYSVVISCFAKNGNLHM-VDCLFRE 554
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
+ T +V S + + + DV AE + +LKKA ++ LI+ Y
Sbjct: 555 MITSGIQADTYVYS-----ILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLY 609
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 15/270 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH---PEK--IPAIIQEMKASSIMPD 55
M E+A EK N +S F++ + + + GH EK + I ++M ++ +
Sbjct: 408 MLEQAWCWFEK---FNYQLNSECFSANIDAFGERGHILLAEKAFMCCIKRKMLSTCVC-- 462
Query: 56 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 115
NV ++A V + A + + M+R G + D+ T+S+L + A L EKA L
Sbjct: 463 ----NVMIKAYGLVEKLDEACEIADGMERYG-ILPDYLTYSSLIHLMSTAKLPEKALYYL 517
Query: 116 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 175
++++ D Y +I+ + + GNL V ++R + + Y +I +
Sbjct: 518 RKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEV 577
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
D+ AE F + + N +I Y K L A++ + + AD N
Sbjct: 578 GDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKTYKLLKSLNADTNLYAS 637
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
D Y + +K A + E TG+ +
Sbjct: 638 NCMIDLYSDHCMVKEAREIFENLKVTGKAN 667
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 16/205 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV----I 79
+N ++ + + + + EM + + PD+ TY L V+ G ER+ +
Sbjct: 144 YNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNSTYGT----LIDVHCKGGRERMALLWL 199
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK--ELEN---RNAHRDLSAYQF-- 132
+M + G + D T S + ++ +AG +EKAE K LE+ H S Y +
Sbjct: 200 GDMIKRG-LLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYSLYTYNT 258
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
LI YG+ G L +V + + + +++ MI V + + + E
Sbjct: 259 LIDTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQ 318
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAE 217
D R N++I Y + ++ AE
Sbjct: 319 CLPDTRTYNILISLYREINDIDVAE 343
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 19/198 (9%)
Query: 113 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS---LRLAFPNTANISYLNMI 169
R E+ + D S Y LI ++ + G + +W R P+ +S + +
Sbjct: 162 RLWHEMHSGGVAPDNSTYGTLIDVHCKGGR-ERMALLWLGDMIKRGLLPDEITMSIV--L 218
Query: 170 QVLVNLKDLPGAEKCFKEWE-------SGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
QV + AE FK W G Y + N +I Y K G+LE + +
Sbjct: 219 QVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQ 278
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
R G PN T+ + ++ M+ V L + ++ + +P + T +
Sbjct: 279 MLREGVSPNVVTFNTMIHVWGKHRRME-QVASLMRTMEEFQC-----LPDTRTYNILISL 332
Query: 283 FEQEKDVDGAEGFLEILK 300
+ + D+D AE + +K
Sbjct: 333 YREINDIDVAEYYFRKMK 350
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 6/267 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KA A+ E M E + + + FN+++ K G E++ I EMK +I TYN
Sbjct: 218 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 277
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + + A R +M+R G + +F+ L Y + GLF+ A E+ N
Sbjct: 278 ILINGFSKNGKMEEARRFHGDMRRSGFAVTPY-SFNPLIEGYCKQGLFDDAWGVTDEMLN 336
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ S Y I G + + + S +A P+ +SY ++ + +
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSS--MAAPDV--VSYNTLMHGYIKMGKFVE 392
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F + +G I N +I + G LE A+ LKE + P+ T+
Sbjct: 393 ASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 241 YYLRNGDMKLAVDCLEKAIDTG-RGDG 266
+++NG++ +A + ++ + G + DG
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDG 479
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 80/232 (34%), Gaps = 35/232 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A+ L E+M + + + +L+ + K G+ + EM I PD Y Y
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D A R+ EEM VA D +
Sbjct: 486 AVGELRLGDSDKAFRLHEEM-----VATD------------------------------H 510
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL+ Y I + GNL + R + +++Y +I+ + A
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ E + V+I +AK GRLE A + ++RG PN T
Sbjct: 571 NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A + L+KM++ + + +++L+ L + K +I +K S I PD YN
Sbjct: 207 MFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYN 266
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I+EM G V+ + ++S L S+YVE F +A E++
Sbjct: 267 SMINVYGKAKLFKEARVLIKEMNEAG-VSPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 325
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N DL+ +I +YGQ + E R++ SLR +SY +++V +
Sbjct: 326 VNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGE 385
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N MI Y K E A L + + RG +PNA T+
Sbjct: 386 AIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 445
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 446 IWGKAGKLDRAATLFQKLRSSG 467
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 128/304 (42%), Gaps = 11/304 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + + A +++M++D RV+ D +SNL +
Sbjct: 178 GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD-RVSGDLVLYSNLIEL 236
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ KA L+ DL AY +I +YG+ E + + + A +
Sbjct: 237 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPN 296
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+SY ++ V V A F E + D+ N+MI Y + ++ A+ L
Sbjct: 297 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW 356
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRTFM 280
R+ +PN ++ Y G+ +L + + R D + V + T I+ +
Sbjct: 357 SLRKMDIEPNVVSYNTILRVY---GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 413
Query: 281 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEKVE 338
+ E EK + + E+ + ++ + + +I + AG+ + + ++L+ VE
Sbjct: 414 KTMEHEKATNLVQ---EMQSRGIEPNAI-TYSTIISIWGKAGKLDRAATLFQKLRSSGVE 469
Query: 339 VSEA 342
+ +
Sbjct: 470 IDQV 473
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 114/242 (47%), Gaps = 22/242 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 419 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 478
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A V + A+R++ E+K + + +I +AG E+A ++
Sbjct: 479 IVAYERVGLMGHAKRLLHELKLPDNIPRETAI-----TILAKAGSTEEATWVFRQAFESG 533
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNL----K 176
+D+S + +I LY + V ++ +R A FP++ N I +++N +
Sbjct: 534 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDS------NAIAMVLNAYGKQR 587
Query: 177 DLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ A+ ++E E GC D V M+ Y+ + E E L ER +DPN +
Sbjct: 588 EFEKADTVYREMQEEGCVFPD-EVHFQMLSLYSSKKDFEMVESLFERLE---SDPNVNSK 643
Query: 236 EI 237
E+
Sbjct: 644 EL 645
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F ++ LY++ + + ++M+ + PDS + + A + A+ V EM+
Sbjct: 541 FGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQ 600
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G V D F L S+Y FE E + LE+ + + LY + L
Sbjct: 601 EEGCVFPDEVHFQML-SLYSSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADKL 659
Query: 144 SEVYRIWRSLR 154
++ R+ +R
Sbjct: 660 NDASRVMNRMR 670
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 131/334 (39%), Gaps = 7/334 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LLE MKE + +N L+ +G E I+ +MK + + TY
Sbjct: 35 DHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNL 94
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ A + ++ +EMK G W T++ L Y GLF++A E++
Sbjct: 95 IKEYANAGRLQDCRKLFQEMKDKGESPNSW-TYNALIQGYGRKGLFKEALELYDEMDGVG 153
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+D+ Y I +YG+ G L ++ R+ + ++Y ++ V A
Sbjct: 154 CAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAH 213
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +E +I N+M+ + KE + A +L E + +G PN T+ Y
Sbjct: 214 EILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLY 273
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R+G A ++ I+ G +P + + A + ++K+
Sbjct: 274 GRHGLYTEAAKLWDEMIEAG------CIPCIIAYSGLIESYGHHGMYQEALACFQDMRKS 327
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
+++ L+ Y AGR L +M K
Sbjct: 328 GIVPDTKIYTALMDAYGKAGRCREAELLYFEMTK 361
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 135/322 (41%), Gaps = 9/322 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE +L+ MK+ + + + + +L+ YA G + + QEMK P+S+TYN
Sbjct: 70 EAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNAL 129
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ A + +EM G A D T++ ++Y + GL E ER L E++ +
Sbjct: 130 IQGYGRKGLFKEALELYDEMDGVG-CAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y L+ +Y + + + I R + A +Y M+ + + A
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEAT 248
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+ +S +I + M+ Y + G A +L + G P + + Y
Sbjct: 249 QLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESY 308
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE-GFLEILKK 301
+G + A+ C + +G VP ++ M + + AE + E+ K+
Sbjct: 309 GHHGMYQEALACFQDMRKSG------IVPDTKIYTALMDAYGKAGRCREAELLYFEMTKE 362
Query: 302 AVDDLGVEVFEPLIRTYAAAGR 323
G+ + L+R +A AGR
Sbjct: 363 GFVPDGI-TYGILVRAFANAGR 383
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 36/238 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E E LL++M + + +N+L+ +YAK + K I++EM + P+ +TYN
Sbjct: 173 LLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYN 232
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + ++ A ++ E +K G V + T+S + S+Y GL+ +A + E+
Sbjct: 233 IMLSSARKEQSVAEATQLFENLKSKG-VVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIE 291
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ AY LI YG G E
Sbjct: 292 AGCIPCIIAYSGLIESYGHHGMYQE----------------------------------- 316
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A CF++ D ++ ++ AY K GR AE L + G P+ T+ I
Sbjct: 317 ALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGIL 374
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 16/190 (8%)
Query: 132 FLITLYG---QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+ + ++G Q L R+ ++ + I Y ++ LVN L AEK +
Sbjct: 20 YTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDM 79
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ + ++ +I YA GRL++ +L + + +G PN+ T+ Y R G
Sbjct: 80 KQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLF 139
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 308
K A++ ++ DG T + + G G LE +++ +D++
Sbjct: 140 KEALELYDEM------DGVGCAKDVHTYNIAIAMY-------GKRGLLEDMERLLDEMDT 186
Query: 309 EVFEPLIRTY 318
+ P TY
Sbjct: 187 KGVPPDQVTY 196
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 28/261 (10%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA EKM+EL PFNS+++LY + + + +++EM+ + + DS T N
Sbjct: 154 DKAEATFEKMRELGFLLKPSPFNSMISLYGQLQKLDMVEKLVREMQETKVECDSPTVNNV 213
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R A I E + G + + T +A Y+ +G EKA
Sbjct: 214 LRVYADTCKIKAMETFKTWVDEQG-IKLEGGTIVAMAKAYLRSGSIEKA----------- 261
Query: 123 AHRDLSAYQFLITLYGQT-GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
I +YG G+ EVYR+W + N Y ++ L+ L ++ GA
Sbjct: 262 -----------IEMYGNVAGSEKEVYRLWDEYKKETKVNDN-GYRTVLSSLLKLDNVQGA 309
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE---IF 238
EK ++EW+ D+ + ++++ Y EG N +++ + R++ + + K + IF
Sbjct: 310 EKIYEEWKPEGPKLDMSIPSLLLSRYYAEGMEINIDQMVKSIRKKRYEMHLKKIKERLIF 369
Query: 239 SDYYLRNGDMKLAVDCLEKAI 259
+ +KL V+ + K+I
Sbjct: 370 IRRVIVVMGLKLKVEQMVKSI 390
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Query: 46 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
E K I+P+ Y+ L V ++ G E + K + D+ ++ L S Y ++
Sbjct: 95 EQKVFDIVPEDYSAR-----LHLVENVLGLEEAEKFFKSIPKNMTDYFVYATLLSSYTKS 149
Query: 106 -GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 164
+KAE +++ S + +I+LYGQ L V ++ R ++ + +
Sbjct: 150 ENTLDKAEATFEKMRELGFLLKPSPFNSMISLYGQLQKLDMVEKLVREMQETKVECDSPT 209
Query: 165 YLNMIQVLVNLKDLPGAEKCFKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
N+++V + + E FK W E G + M AY + G +E A E+
Sbjct: 210 VNNVLRVYADTCKIKAME-TFKTWVDEQGIKLEGGTIV-AMAKAYLRSGSIEKAIEM 264
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 22/294 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+L+ Y + ++ EM + ++ D+ TYN + V D++ A + ++M
Sbjct: 392 FNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMI 451
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE----NRNAHR-------DLSAYQF 132
G V D T + L + G + A K ++ + +A R D+ Y
Sbjct: 452 SSG-VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNI 510
Query: 133 LITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
LI+ G E +++ + R PNT I+Y +MI L L A + F S
Sbjct: 511 LISGLINEGKFLEAEELYKEMPHRGIVPNT--ITYSSMINGLCKQSRLDEATQMFDSMGS 568
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
+ D+ N ++ Y K GR+++ EL RRG +A T+ + + G++
Sbjct: 569 KSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNING 628
Query: 251 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
A+D ++ I +G P + TIR+ + ++++ A LE L+ ++D
Sbjct: 629 ALDIFQEMISSG------VYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMSMD 676
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 16/322 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK-ASSIMPDSYTYNVW 62
+A ALL++M E L + + + +++ K G ++++M+ S I P+ Y+
Sbjct: 196 EAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAI 255
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L S A + EM+ G + D T++ + + +G + +A+R L+E+ R
Sbjct: 256 IDGLWKDGRHSDAHNLYTEMQEKG-IFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK 314
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ ++ Y LI Y + E ++ + R PNT I+Y +MI L
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNT--ITYNSMIDGFCKQNRLDA 372
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE F + + D+ N +I Y R+++ EL G + T+
Sbjct: 373 AEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIH 432
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF-EQEKDVDGAEGFLEIL 299
+ GD+ A+D ++ I +G P T T + + K D E F +
Sbjct: 433 GFCLVGDLNAALDLSQQMISSG------VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486
Query: 300 KKAVDDLGVEVF---EPLIRTY 318
K +D F EP ++TY
Sbjct: 487 KSKMDLDASRPFNGVEPDVQTY 508
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 126/313 (40%), Gaps = 21/313 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ LL++M E + + + +++L+ Y K + + EM I+P++ TYN +
Sbjct: 302 EAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMI 361
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
N + AE + M G + D TF+ L Y A + L E+
Sbjct: 362 DGFCKQNRLDAAEHMFYVMATKG-CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGL 420
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D + Y LI + G+L+ + + + + ++ ++ L + L A +
Sbjct: 421 VADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 480
Query: 184 CFKEWESGCATY-----------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
FK + D++ N++I EG+ AEEL + RG PN
Sbjct: 481 MFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNT 540
Query: 233 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK-WVPSSETIRTFMRHFEQEKDV-D 290
T+ + NG K + L++A G K + P T T + + + V D
Sbjct: 541 ITYS-----SMINGLCKQSR--LDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593
Query: 291 GAEGFLEILKKAV 303
G E F E+ ++ +
Sbjct: 594 GLELFCEMGRRGI 606
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/341 (17%), Positives = 127/341 (37%), Gaps = 49/341 (14%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
S + FN LM + + P+ + ++ Q+M+ I D Y++N+ ++ + + + A
Sbjct: 76 SVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTF 135
Query: 80 EEMKRDGRVAADWTTFSN-LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
++ + G D TFS L + VE ++ AL +L ++ ++ + L+
Sbjct: 136 GKITKLG-FQPDVVTFSTLLHGLCVE----DRVSEAL-DLFHQMCRPNVVTFTTLMNGLC 189
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE----------- 187
+ G + E + + I+Y ++ + + D A ++
Sbjct: 190 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNV 249
Query: 188 ----------WESGCAT---------------YDIRVTNVMIGAYAKEGRLENAEELKER 222
W+ G + D+ N MI + GR A+ L +
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
R +PN T+ + Y++ A + ++ + G +P++ T + +
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG------IIPNTITYNSMIDG 363
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
F ++ +D AE ++ V F LI Y A R
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKR 404
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A + + M + + FN+L++ Y K G + + EM I+ D+ TY
Sbjct: 557 DEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITL 616
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V +I+GA + +EM G T S L ++ + E+ +RA+ LE+
Sbjct: 617 IHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSK----EELKRAVAMLEDLQ 672
Query: 123 AHRDLS 128
DLS
Sbjct: 673 MSMDLS 678
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 117/255 (45%), Gaps = 1/255 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A +L EKM + + + + + SL+ + K G E I +EM PD N
Sbjct: 498 VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNS 557
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+M + ++ + EE+K G V D ++S L V+AG + + E++ +
Sbjct: 558 YMDCVFKAGEVEKGRALFEEIKAQGLVP-DVRSYSILIHGLVKAGFSRETYKLFYEMKEQ 616
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
H D+ AY +I + ++G + + Y++ ++ ++Y +++ L + L A
Sbjct: 617 GLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA 676
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E +S ++ + + +I + K GR++ A + E ++G PN+ TW D
Sbjct: 677 YMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDA 736
Query: 242 YLRNGDMKLAVDCLE 256
++ ++ A C +
Sbjct: 737 LVKAEEIDEAQVCFQ 751
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 1/247 (0%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E +LE+M G S+ L+ + K+ ++ +I+ M+ P Y + A
Sbjct: 153 EQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGA 212
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
L+A N + +M+ G A+ F+ L ++ G + A L E+++ +
Sbjct: 213 LSAANRPDPMLTLFHQMQEIG-YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTA 271
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
DL Y I +G+ G + ++ + ++ +++Y +I VL + L A + F
Sbjct: 272 DLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELF 331
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+E + + + N MI Y G+ + A L ER +R+G P+ + R
Sbjct: 332 EELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRK 391
Query: 246 GDMKLAV 252
G ++ A+
Sbjct: 392 GKVEEAL 398
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 120/282 (42%), Gaps = 10/282 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A +LL++MK + + +N + + K G + EMKA ++PD TY
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A + EE+ + V + ++ + Y AG F++A L+ + +
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVY-AYNTMIMGYGSAGKFDEAYSLLERQKRKG 373
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGA 181
+ AY ++T G+ G + E RI +R A PN +Y +I +L +L A
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLT--TYNILIDMLCKAGELEAA 431
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K + +I N+MI K +L+ A + + P+++T+ D
Sbjct: 432 LKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG 491
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
R G + A EK +D+ + +P+ + +++F
Sbjct: 492 LGRRGRVDDAYSLYEKMLDSDQ------IPNVVVYTSLIQNF 527
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 111/289 (38%), Gaps = 41/289 (14%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +MKE L + +N+++ + K+G +K +++EMK + P TY + LA
Sbjct: 609 LFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLA 668
Query: 68 AVNDISGAERVIEEMK-------------------RDGRV---------------AADWT 93
++ + A + EE K + GR+ +
Sbjct: 669 KIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSY 728
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T++ L V+A ++A+ + ++N + Y +I ++ + W+ +
Sbjct: 729 TWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEM 788
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
+ NI+Y MI L ++ A F +++ D N MI + +
Sbjct: 789 QKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKA 848
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+A + E R +G N+KT + D + DCLE+A G
Sbjct: 849 MDAYIVFEETRLKGCRVNSKTCVVLLDALHK-------ADCLEQAAIVG 890
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 136/364 (37%), Gaps = 47/364 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +LLE+ K S + +N ++T + G E+ I EM+ + P+ TYN+
Sbjct: 360 DEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNIL 418
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L ++ A +V + MK G + + T + + +A ++A L+++
Sbjct: 419 IDMLCKAGELEAALKVQDTMKEAG-LFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV 477
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
D + LI G+ G + + Y ++ + + PN + Y ++IQ
Sbjct: 478 CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNV--VVYTSLIQNFFKCGRKED 535
Query: 181 AEKCFKEW-ESGCA-------TY---------------------------DIRVTNVMIG 205
K +KE GC+ +Y D+R +++I
Sbjct: 536 GHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIH 595
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
K G +L + +G + + D + ++G + A LE+ G
Sbjct: 596 GLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG--- 652
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
P+ T + + + +D A E K DL V ++ LI + GR
Sbjct: 653 ---LQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRID 709
Query: 326 PVML 329
L
Sbjct: 710 EAYL 713
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 59/322 (18%), Positives = 125/322 (38%), Gaps = 31/322 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSL--------MTLYAKTGHPEKIPAIIQEMKASSIMP 54
EK EA +E M++ + N L + ++ + PE I +++ +K ++
Sbjct: 58 EKNEAKVEGMRKTVYDLCGVLENGLWGPDVEEALNVFDEMSQPEVIVGVMKRLKDVNVAF 117
Query: 55 DSY--------------TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 100
+ YN ++ +A ++ E+++EEM G ++ + +AS
Sbjct: 118 QYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVAS 177
Query: 101 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 160
+V++ ++A ++ + SAY LI + ++ ++
Sbjct: 178 -FVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQ-EIGYE 235
Query: 161 ANIS-YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
AN+ + +++V + A E +S T D+ + NV I + K G+++ A +
Sbjct: 236 ANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKF 295
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 279
+ +G P+ T+ + + AV+ E+ +D R VP T
Sbjct: 296 FHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEE-LDLNRS-----VPCVYAYNTM 349
Query: 280 MRHFEQEKDVDGAEGFLEILKK 301
+ + D A LE K+
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKR 371
>gi|357110688|ref|XP_003557148.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Brachypodium distachyon]
Length = 1038
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A + KMK ++ L++L A+ G E+ + +EM+A I+P +YT
Sbjct: 295 LLEEAMNVWRKMKRSRFVPEEATYSGLISLSARHGRGEQALGLYEEMRAHGIVPSNYTCA 354
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ D S A + EM++ R+ D + L IY + GL+E A+ +E++
Sbjct: 355 SLLSLYYKTEDYSKALSLFAEMEQS-RIVPDEVIYGILVRIYGKVGLYEDAQCTFEEIDR 413
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D Y + ++ GN ++ S+RL + SY +++ V +D+
Sbjct: 414 ADLLSDEQTYVAMAQVHMNAGNYDRALQVLDSMRLRNVEPSLFSYSAVLRCHVAKEDIAA 473
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
AE F+ S C D+ N ++ Y K G+LE A L + R+
Sbjct: 474 AEDAFRAL-SKCGIPDVFCCNDLLRLYVKLGQLEKASALILKLRK 517
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L +MKE + + FNS++ +YA +G +K I +EM++S +P+S TY
Sbjct: 834 QDASVLFTRMKEEGIMPGKISFNSMVNVYATSGLHDKAKFIFEEMQSSGQIPESLTYLAL 893
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++A S AE I +M + F++L +++ G ++A R E+E+
Sbjct: 894 IKAYTEGRSYSKAEEAI-QMMLTSNITLSCPHFNHLIFAFLKEGKIDEARRICNEMEDLG 952
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
DL+ + ++ +Y + G SE ++++
Sbjct: 953 VAPDLACCRTMMRVYLEYGCCSEGISLFKT 982
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA + +EL L + ++++ Y K G + + MK IMP ++N
Sbjct: 799 DKATEMFTAAQELGLRIDEKTYTNMLSFYGKAGRHQDASVLFTRMKEEGIMPGKISFNSM 858
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A+ + EEM+ G++ T + L Y E + KAE A++ + N
Sbjct: 859 VNVYATSGLHDKAKFIFEEMQSSGQIPESLTYLA-LIKAYTEGRSYSKAEEAIQMMLTSN 917
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ LI + + G + E RI +
Sbjct: 918 ITLSCPHFNHLIFAFLKEGKIDEARRICNEM 948
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/350 (18%), Positives = 143/350 (40%), Gaps = 12/350 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE +M E+ + ++ +L+ YA+ G + ++ ++P +N +
Sbjct: 194 AEETFLEMLEVGVEPDAVACGTLLCTYARRGQHTDMMLFYAAVRRRGVVPPVSAFNFMVS 253
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+L + + G + R+ V + T++ + YV+ L E+A ++++
Sbjct: 254 SLQK-DKLHGKVIYLWNQMRETNVVPNQFTYTIVIGSYVKESLLEEAMNVWRKMKRSRFV 312
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ + Y LI+L + G + ++ +R +N + +++ + +D A
Sbjct: 313 PEEATYSGLISLSARHGRGEQALGLYEEMRAHGIVPSNYTCASLLSLYYKTEDYSKALSL 372
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F E E D + +++ Y K G E+A+ E R + +T+ + ++
Sbjct: 373 FAEMEQSRIVPDEVIYGILVRIYGKVGLYEDAQCTFEEIDRADLLSDEQTYVAMAQVHMN 432
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE-GFLEILKKAV 303
G+ A+ + +D+ R + PS + +R ++D+ AE F + K +
Sbjct: 433 AGNYDRAL----QVLDSMRLRNVE--PSLFSYSAVLRCHVAKEDIAAAEDAFRALSKCGI 486
Query: 304 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK-VEVSEA-SKKLLEAIC 351
D V L+R Y G+ LK+ K V++ E ++E C
Sbjct: 487 PD--VFCCNDLLRLYVKLGQLEKASALILKLRKEVQLDEGLCMTVMEVCC 534
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/283 (16%), Positives = 106/283 (37%), Gaps = 8/283 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE ++ + ++ +N+ + ++G +I M +S I T+N+
Sbjct: 729 QEAENIINGCFHGKVQLDTVVYNTFIKSMLESGKLYSAVSIHDRMISSGIPQSLQTFNIM 788
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + + G + D T++N+ S Y +AG + A ++
Sbjct: 789 ISVYGQGGKLDKATEMFTAAQELG-LRIDEKTYTNMLSFYGKAGRHQDASVLFTRMKEEG 847
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ ++ +Y +G + I+ ++ + +++YL +I+ + AE
Sbjct: 848 IMPGKISFNSMVNVYATSGLHDKAKFIFEEMQSSGQIPESLTYLALIKAYTEGRSYSKAE 907
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + + T N +I A+ KEG+++ A + G P+ Y
Sbjct: 908 EAIQMMLTSNITLSCPHFNHLIFAFLKEGKIDEARRICNEMEDLGVAPDLACCRTMMRVY 967
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 285
L G C + I + G P S + FE
Sbjct: 968 LEYG-------CCSEGISLFKTTCGSLKPDSFILSAAFHLFEH 1003
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 9/252 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+++ + + + L S + FN+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 154 RAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLI 213
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + + A + EM G V + TF+ L ++ + G+ + A K++ ++
Sbjct: 214 NGLCKESKVDEANELFNEMLDRGLVP-NGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGF 272
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
DL Y LI + G+L +V + + + I+Y +I DL A
Sbjct: 273 SPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAF- 331
Query: 184 CFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
E+ IR+ NV ++ +EGR ++AE++ G P+ T+ +
Sbjct: 332 ---EFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMII 388
Query: 240 DYYLRNGDMKLA 251
+ + + GD++ A
Sbjct: 389 NEFCKKGDVRTA 400
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 1/188 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A L +M + L + + F +L+ ++ K G + I ++M + PD TYN
Sbjct: 222 VDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNT 281
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L D+ +I+EM +G + D T++ L + G E A K +
Sbjct: 282 LIYGLCKKGDLKQVRALIDEMSMNG-LKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKE 340
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ D AY L++ Q G + +++R + N +Y +I D+ A
Sbjct: 341 SIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTA 400
Query: 182 EKCFKEWE 189
+ KE +
Sbjct: 401 SRLLKEMQ 408
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 1 MTEKAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 58
M + A + ++M L+ GFS + +N+L+ K G +++ A+I EM + + PD T
Sbjct: 256 MVDSAMEIYKQM--LSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKIT 313
Query: 59 YNVWMRALAAVNDISGA----ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
Y + D+ A +R+I+E R VA ++ L S + G + AE+
Sbjct: 314 YTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVA-----YTALVSGLCQEGRADDAEKM 368
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
+E+ + D Y +I + + G++ R+ + ++
Sbjct: 369 FREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 80/199 (40%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M ++ A+ V + + + G + +F+ L + Y+ G ++ R
Sbjct: 137 YFFNIVMHRFCKEGEMRRAQSVFDAITKWG-LRPSVVSFNTLMNGYIRLGDLDEGFRLKS 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
+ D+ Y LI + + E ++ + R PN +++ +I V
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPN--GVTFTTLIDVHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ L + G P+ T
Sbjct: 254 NGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GD++ A +
Sbjct: 314 YTTLIDGCCKEGDLETAFE 332
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 45/88 (51%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A ++M + ++ ++ + +L++ + G + + +EM + + PD+ TY +
Sbjct: 328 ETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMI 387
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAA 90
+ D+ A R+++EM+RDG V
Sbjct: 388 INEFCKKGDVRTASRLLKEMQRDGHVPC 415
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 131/334 (39%), Gaps = 7/334 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LLE MKE + +N L+ +G E I+ +MK + + TY
Sbjct: 35 DHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNL 94
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ A + ++ +EMK G W T++ L Y GLF++A E++
Sbjct: 95 IKEYANTGRLQDCRKLFQEMKDKGESPNSW-TYNALIQGYGRKGLFKEALELYDEMDGVG 153
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+D+ Y I +YG+ G L ++ R+ + ++Y ++ V A
Sbjct: 154 CAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAH 213
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +E +I N+M+ + KE + A +L E + +G PN T+ Y
Sbjct: 214 EILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLY 273
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R+G A ++ I+ G +P + + A + ++K+
Sbjct: 274 GRHGLYTEAAKLWDEMIEAG------CIPCIIAYSGLIESYGHHGMYQEALACFQDMRKS 327
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
+++ L+ Y AGR L +M K
Sbjct: 328 GIVPDTKIYTALMDAYGKAGRCREAELLYFEMTK 361
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 135/322 (41%), Gaps = 9/322 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE +L+ MK + + + + +L+ YA TG + + QEMK P+S+TYN
Sbjct: 70 EAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNAL 129
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ A + +EM G A D T++ ++Y + GL E ER L E++ +
Sbjct: 130 IQGYGRKGLFKEALELYDEMDGVG-CAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y L+ +Y + + + I R + A +Y M+ + + A
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEAT 248
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+ +S +I + M+ Y + G A +L + G P + + Y
Sbjct: 249 QLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESY 308
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE-GFLEILKK 301
+G + A+ C + +G VP ++ M + + AE + E+ K+
Sbjct: 309 GHHGMYQEALACFQDMRKSG------IVPDTKIYTALMDAYGKAGRCREAELLYFEMTKE 362
Query: 302 AVDDLGVEVFEPLIRTYAAAGR 323
G+ + L+R +A AGR
Sbjct: 363 GFVPDGI-TYGILVRAFANAGR 383
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 36/238 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E E LL++M + + +N+L+ +YAK + K I++EM + P+ +TYN
Sbjct: 173 LLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYN 232
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + ++ A ++ E +K G V + T+S + S+Y GL+ +A + E+
Sbjct: 233 IMLSSARKEQSVAEATQLFENLKSKG-VVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIE 291
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ AY LI YG G E
Sbjct: 292 AGCIPCIIAYSGLIESYGHHGMYQE----------------------------------- 316
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A CF++ D ++ ++ AY K GR AE L + G P+ T+ I
Sbjct: 317 ALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGIL 374
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 16/190 (8%)
Query: 132 FLITLYG---QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+ + ++G Q L R+ ++ + I Y ++ LVN L AEK +
Sbjct: 20 YTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDM 79
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ + ++ +I YA GRL++ +L + + +G PN+ T+ Y R G
Sbjct: 80 KRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLF 139
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 308
K A++ ++ DG T + + G G LE +++ +D++
Sbjct: 140 KEALELYDEM------DGVGCAKDVHTYNIAIAMY-------GKRGLLEDMERLLDEMDT 186
Query: 309 EVFEPLIRTY 318
+ P TY
Sbjct: 187 KGVPPDQVTY 196
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 134/321 (41%), Gaps = 7/321 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++ ++L ++MK+L + +N+++T + H ++ + QEMK + P+ TYN
Sbjct: 127 DRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 186
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ EM+ G ++ + T++ L + Y AGL ++A K L ++
Sbjct: 187 LDVYGKGGMHKEASELLVEMEAAG-ISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 245
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + + + + +R ++Y +I + ++ L
Sbjct: 246 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 305
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K FK + T D+ N ++ ++ G L + +R G P T+ I + Y
Sbjct: 306 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 365
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R G + +VD + + TG P+ T M +E E + + +A
Sbjct: 366 GRCGYVDYSVDIYKGLLRTG------LQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA 419
Query: 303 VDDLGVEVFEPLIRTYAAAGR 323
L LI +YA +G+
Sbjct: 420 GLQLSDACHAGLIHSYANSGQ 440
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A LL +M+ + + + +N L+ YA+ G ++ A+ + + + + PD +TY
Sbjct: 195 MHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYC 254
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A EM R + T++ L IY + + K ++
Sbjct: 255 TLISAFNRAERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQE 313
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
+N DL + L+ +G G L+EV ++R ++ A
Sbjct: 314 KNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA 349
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 138/359 (38%), Gaps = 49/359 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA +M++ N + + +N L+ +Y + + + + + M+ + PD T+N
Sbjct: 267 EKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSL 326
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+++ ++ V EMKR G + TF+ L Y G + + K L
Sbjct: 327 LKSFGNCGMLTEVSNVFREMKRAGYMPG-VDTFNILIECYGRCGYVDYSVDIYKGLLRTG 385
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWR-----SLRLAFPNTANI--SYLNMIQVLVNL 175
+ + L+ + G + ++ + L+L+ A + SY N Q
Sbjct: 386 LQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLR 445
Query: 176 KDLPGAEKCFKEWESG--CATY---------------------------DIRVTNVMIGA 206
K + EK K+ SG C T+ DI+V N MI
Sbjct: 446 KYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISM 505
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
AK G +E A +L E R+ P+ T+ Y R G A + + + G+
Sbjct: 506 CAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKA-- 563
Query: 267 GKWVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKAV--DDLGVEVFEPLIRTYAAAG 322
P+ T T + + + + D A F +++ V D+ F L+ +Y++ G
Sbjct: 564 ----PNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNF---TFNTLVGSYSSLG 615
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 100/241 (41%), Gaps = 2/241 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS-YTYNV 61
++ E + ++M E L S L+ YA +G ++ I E++ S+ P S
Sbjct: 407 QQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKT 466
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ A + A+ + ++ +G + D F+ + S+ + G E+A + L+E+
Sbjct: 467 FVLAYCKCCMDNEAQLALNQLYDNGH-SPDIKVFNAMISMCAKRGWIERAVKLLEEIRKA 525
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y L+++YG+ G + + +R A I+Y ++ + A
Sbjct: 526 QLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDA 585
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F + + D N ++G+Y+ G + A + E G P T++ D
Sbjct: 586 ARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 645
Query: 242 Y 242
Y
Sbjct: 646 Y 646
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 111/322 (34%), Gaps = 55/322 (17%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
L E M+ +++ +N ++ LY K G ++I ++ QEMK I PD Y
Sbjct: 96 LFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDY--------- 146
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
T++ + + ++ ++A R +E++ +
Sbjct: 147 ---------------------------TYNTMITACIQNSHCQEALRLFQEMKEAGCCPN 179
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKC 184
Y L+ +YG+ G E + + A PN + L L D A K
Sbjct: 180 RVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK- 238
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K S D +I A+ + R E A E R+ PN T+ I D Y R
Sbjct: 239 -KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGR 297
Query: 245 ----NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ MK+ EK P T + ++ F + +K
Sbjct: 298 MEKLDDMMKVFKFMQEK----------NCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMK 347
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
+A GV+ F LI Y G
Sbjct: 348 RAGYMPGVDTFNILIECYGRCG 369
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KAE ++ +M+ + + +N+L+ Y K G + + +M A+ + PD++T+N
Sbjct: 546 MYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFN 605
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG 86
+ + +++ A VIE M G
Sbjct: 606 TLVGSYSSLGLYKEALSVIEYMTEHG 631
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 146/341 (42%), Gaps = 50/341 (14%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI---PAIIQEMKASSIMPDSYTYN 60
KA ++E MK + + + +N+L+ Y K G K+ AI++EM+A I P+ T+N
Sbjct: 181 KAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFN 240
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------------- 106
+ + ++S A +V EM R G V + T+++L + G
Sbjct: 241 ILIDGFCKDKNVSAAMKVFAEMNRQG-VKPNVVTYNSLINGLCNNGKVNEATALRDQMVN 299
Query: 107 ---------------------LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
+ ++A ++ + +++ Y LI Y + N+ +
Sbjct: 300 SCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMED 359
Query: 146 VYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ ++R + + P+ + +Y +I L DL A E ++ D+ N++
Sbjct: 360 AFALYRIMLGKGVCPDVS--TYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNIL 417
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I + +G ++ A L + R+G P+ T+ D Y + G+++ A++ + GR
Sbjct: 418 IDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGR 477
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAV 303
+ + T ++ F ++ ++ A G L E+L+K +
Sbjct: 478 ------LANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGL 512
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 4/235 (1%)
Query: 17 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 76
L S N LM+ K G + + +EM I P ++N+ + L V ++ A
Sbjct: 124 LKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAG 183
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK---AERALKELENRNAHRDLSAYQFL 133
+IE+MK G V+A+ T++ L Y + G K A+ LKE+ + + L
Sbjct: 184 DIIEDMKVRG-VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 193
I + + N+S +++ + ++Y ++I L N + A + + C
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+I N ++ + K ++ A EL + ++G PN T+ I D Y ++ +M
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENM 357
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 1/242 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A AL ++M L + + N+L+ + K ++ + +M I P+ TYN+ +
Sbjct: 290 ATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A ++ A + M G V D +T++ L + G E A + E++ ++
Sbjct: 350 AYCKDENMEDAFALYRIMLGKG-VCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLK 408
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI G + + R+ + + ++Y MI +L A
Sbjct: 409 ADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNL 468
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ E ++ NV+I + K+ +LE+A L +G PN T+EI ++ +
Sbjct: 469 RSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMME 528
Query: 245 NG 246
G
Sbjct: 529 KG 530
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 140/332 (42%), Gaps = 17/332 (5%)
Query: 1 MTEKAEALLEKMK----ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 56
M + A +LE M+ + NL ++ NSL AK + + ++M ++P+
Sbjct: 135 MPQDAIQVLEYMRLHGFKPNLHACTVLLNSL----AKDRLTDTVWKSYKKMIRVGVVPNI 190
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
+ YNV + A D+ AE+++ EM+ V D T++ L S+Y L +A
Sbjct: 191 HIYNVLIHACCKSGDVEKAEQLVCEMELKS-VFPDLYTYNTLISLYSRKSLHYEALCVQD 249
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+E D+ Y LI + + G + E +++R ++ PN +++Y +I +
Sbjct: 250 RMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVSPN--HVTYTTLIDGYCRVN 307
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
D A + K E+ + N ++ +EGR+ +A +L R +P+ T
Sbjct: 308 DFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCN 367
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ Y + GDMK A+ K +D G S T + + F +D++ A+ L
Sbjct: 368 TLINAYCKIGDMKSALKVKSKMLDAGLQ------LDSFTYKALIHGFCWVRDMESAKELL 421
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 328
+ G + L+ Y G ++
Sbjct: 422 FCMLDVGLSPGYCTYSWLVDGYCELGNEGAII 453
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 92/231 (39%), Gaps = 5/231 (2%)
Query: 13 KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 72
K L+LG ++ +NS++ + G ++ EM + PD+ T N + A + D+
Sbjct: 322 KGLHLGVAT--YNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDM 379
Query: 73 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
A +V +M D + D T+ L + E A+ L + + Y +
Sbjct: 380 KSALKVKSKM-LDAGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDVGLSPGYCTYSW 438
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESG 191
L+ Y + GN + + L ++S +I+ L + + + AEK +
Sbjct: 439 LVDGYCELGNEGAIISLLDEF-LTKGYCVDLSVCRALIRRLCHQERVGFAEKIYSTMHLR 497
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ D + + AY K+G+ E+ +R N K + F+ Y
Sbjct: 498 GVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKLYRCFNASY 548
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL +M E + ++ N+L+ Y K G + + +M + + DS+TY +
Sbjct: 347 ANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIH 406
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
V D+ A+ ++ M D ++ + T+S L Y E G L E +
Sbjct: 407 GFCWVRDMESAKELLFCM-LDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYC 465
Query: 125 RDLSAYQFLI 134
DLS + LI
Sbjct: 466 VDLSVCRALI 475
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 134/321 (41%), Gaps = 7/321 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++ ++L ++MK+L + +N+++T + H ++ + QEMK + P+ TYN
Sbjct: 266 DRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 325
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ EM+ G ++ + T++ L + Y AGL ++A K L ++
Sbjct: 326 LDVYGKGGMHKEASELLVEMEAAG-ISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 384
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + + + + +R ++Y +I + ++ L
Sbjct: 385 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 444
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K FK + T D+ N ++ ++ G L + +R G P T+ I + Y
Sbjct: 445 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECY 504
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R G + +VD + + TG P+ T M +E E + + +A
Sbjct: 505 GRCGYVDYSVDIYKGLLRTG------LQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA 558
Query: 303 VDDLGVEVFEPLIRTYAAAGR 323
L LI +YA +G+
Sbjct: 559 GLQLSDACHAGLIHSYANSGQ 579
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 2/245 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS-YTYNV 61
++ E + ++M E L S L+ YA +G ++ I E++ S+ P S
Sbjct: 546 QQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKT 605
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ A + A+ + ++ +G + D F+ + S+ + G E+A + L+E+
Sbjct: 606 FVLAYCKCGMDNEAQLALNQLYDNGH-SPDIKVFNAMISMCAKRGWIERAVKLLEEIRKA 664
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y L+++YG+ G + + +R A I+Y ++ + A
Sbjct: 665 QLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDA 724
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F + + D N ++G+Y+ G + A + E G P T++ D
Sbjct: 725 ARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 784
Query: 242 YLRNG 246
Y RN
Sbjct: 785 YNRNA 789
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A LL +M+ + + + +N L+ YA+ G ++ A+ + + + + PD +TY
Sbjct: 334 MHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYC 393
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A EM R + T++ L IY + + K ++
Sbjct: 394 TLISAFNRAERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQE 452
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
+N DL + L+ +G G L+EV ++R ++ A
Sbjct: 453 KNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA 488
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A LLE++++ L + +N LM++Y + G K ++ EM+ + P+ TYN
Sbjct: 652 ERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTL 711
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A RV +M RV D TF+ L Y GL+++A ++ +
Sbjct: 712 LYSYTKHGRMDDAARVFGDMVA-ARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHG 770
Query: 123 AHRDLSAYQFLITLYGQTGNLS 144
++ L+ Y + + S
Sbjct: 771 CQPTQITFKALLDGYNRNASPS 792
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/225 (17%), Positives = 80/225 (35%), Gaps = 35/225 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +LM A+ G ++ + QEM + + + + + A + I+E++
Sbjct: 532 FAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELE 591
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ + Y + G+ +A+ AL +L + D+ + +I++ + G +
Sbjct: 592 KSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWI 651
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ +R A ++Y N +
Sbjct: 652 ERAVKLLEEIRKAQLKPDGVTY-----------------------------------NCL 676
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ Y +EG AEE+ RR G PN T+ Y ++G M
Sbjct: 677 MSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRM 721
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 111/322 (34%), Gaps = 55/322 (17%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
L E M+ +++ +N ++ LY K G ++I ++ QEMK I PD Y
Sbjct: 235 LFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDY--------- 285
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
T++ + + ++ ++A R +E++ +
Sbjct: 286 ---------------------------TYNTMITACIQNSHCQEALRLFQEMKEAGCCPN 318
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKC 184
Y L+ +YG+ G E + + A PN + L L D A K
Sbjct: 319 RVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK- 377
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K S D +I A+ + R E A E R+ PN T+ I D Y R
Sbjct: 378 -KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGR 436
Query: 245 ----NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ MK+ EK P T + ++ F + +K
Sbjct: 437 MEKLDDMMKVFKFMQEK----------NCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMK 486
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
+A GV+ F LI Y G
Sbjct: 487 RAGYMPGVDTFNILIECYGRCG 508
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KAE ++ +M+ + + +N+L+ Y K G + + +M A+ + PD++T+N
Sbjct: 685 MYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFN 744
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG 86
+ + +++ A VIE M G
Sbjct: 745 TLVGSYSSLGLYKEALSVIEYMTEHG 770
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
KA LL++M E NL + +NSL+ + GH + ++ MK ++PD TY
Sbjct: 308 VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGC 367
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ L N + A R+ + + +G V+A+ +S L Y + G ++A +++ ++
Sbjct: 368 FIDFLCKSNRVEEARRLFDSLTEEG-VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N + + LI GNL E ++ + +++ T ++ +I ++ D
Sbjct: 427 NCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTV-YTFNILIGRMLKQGDFDD 485
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A KC ++ S R N I Y G+++ AE++ + + G P+ T+
Sbjct: 486 AHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIK 545
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
Y + G A D L+ D PS T + ++
Sbjct: 546 AYGKLGLTYSAFDVLKSMFD------ADCEPSHHTFLSLIKQL 582
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 132/347 (38%), Gaps = 41/347 (11%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN ++ +Y K G ++ + +M + + PD +T ++ D+ A RV EEM
Sbjct: 195 FNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP 254
Query: 84 R---------------DGRVAADWTTFSNL------ASIYVEAGLF--------EKAERA 114
GR+ + F + ++Y L KA
Sbjct: 255 NRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGL 314
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 172
L E+ RN DL Y LI + G+L YR+ + R P+ +Y I L
Sbjct: 315 LDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQR--TYGCFIDFL 372
Query: 173 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
+ A + F + ++ + +V+I Y K G+++ A L E+ + PNA
Sbjct: 373 CKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNA 432
Query: 233 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
T+ G++K A+ ++ + G P+ T + ++ D D A
Sbjct: 433 YTFNALIHGLCSAGNLKEALSLFDQMVKMG------LKPTVYTFNILIGRMLKQGDFDDA 486
Query: 293 EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKV 337
L+ + + + + I Y +AG+ M+ ++K E V
Sbjct: 487 HKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGV 533
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 10/224 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+TL A+ G +++ + EM + D YT+N+ + + + A++ + +M
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G ++ D+ T ++ Y + + A R +E+ NRN +Y LI + G +
Sbjct: 220 QAG-LSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNE----VSYNQLIHGLCEAGRI 274
Query: 144 SEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E ++ ++ +PN +Y +I+ L K++ A E D+ N
Sbjct: 275 DEAVSLFVRMKDDCCYPNV--YTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYN 331
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+I + G L++A L + RG P+ +T+ F D+ ++
Sbjct: 332 SLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKS 375
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 29/240 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L ++M ++ L + FN L+ K G + +Q+M +S P + TYN +
Sbjct: 449 KEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAF 508
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + AE ++ +MK +G V D T+++L Y + GL A LK + +
Sbjct: 509 IEVYCSAGKVQEAEDMMVQMKEEG-VPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM--FD 565
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
A + S + FL +L Q + Y + +S ++ + N D+PG+
Sbjct: 566 ADCEPSHHTFL-SLIKQL--FDKRYVVEKSGETG------------VESVSNFGDVPGSN 610
Query: 183 -----------KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
+ F+E E T D + +I K L A +L ++ ++ G P+
Sbjct: 611 MWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPS 670
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 134/322 (41%), Gaps = 8/322 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+++ AL +M+EL + +L+ ++++ G + +++ EMK+++ D YNV
Sbjct: 77 SDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNV 136
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ V + A + EMK +G V D T++++ + +A ++A +++E
Sbjct: 137 CIDCFGKVGKVDMAWKFFHEMKANGLVPDD-VTYTSMMGVLCKANRLDEAVEIFEQMEQN 195
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
AY +I YG G E Y + R + ++Y ++ L A
Sbjct: 196 RQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKA 255
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F+E + A ++ N++IG K G +E A ++++ + G PN +T I D
Sbjct: 256 LRIFEEMKRD-AMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDR 314
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ + A E D P T + + ++ VD A E +
Sbjct: 315 LCKAQKLDEACSIFEGM------DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLD 368
Query: 302 AVDDLGVEVFEPLIRTYAAAGR 323
A V V+ LIR + R
Sbjct: 369 ADQIPNVVVYTSLIRNFFKCDR 390
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 133/304 (43%), Gaps = 11/304 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A +LL++MK + +N + + K G + EMKA+ ++PD TY
Sbjct: 112 VDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTS 171
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M L N + A + E+M+++ +V + ++ + Y AG F++A L+ +
Sbjct: 172 MMGVLCKANRLDEAVEIFEQMEQNRQVPCAY-AYNTMIMGYGSAGKFDEAYSLLERQRAK 230
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ AY ++T G+ G + RI+ + R A PN +Y +I +L ++
Sbjct: 231 GCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLP--TYNIIIGMLCKAGNVEA 288
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K + ++R N+MI K +L+ A + E + P+ T+ D
Sbjct: 289 AFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLID 348
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH-FEQEKDVDGAEGFLEIL 299
+ G + A E+ +D + +P+ + +R+ F+ ++ DG + + E++
Sbjct: 349 GLGKQGRVDDAYRIYERMLDADQ------IPNVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402
Query: 300 KKAV 303
+
Sbjct: 403 RSGC 406
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 8/247 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +LLE+ + S + +N ++T K G +K I +EMK + MP+ TYN+
Sbjct: 218 DEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA-MPNLPTYNII 276
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L ++ A +V + MK G + + T + + +A ++A + ++ +
Sbjct: 277 IGMLCKAGNVEAAFKVRDAMKEAG-LFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV 335
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
D + + LI G+ G + + YRI+ + A PN + Y ++I+
Sbjct: 336 CSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNV--VVYTSLIRNFFKCDRKED 393
Query: 181 AEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
K +KE SGC+ D+ + N + K G E L E + RG P+ +++ I
Sbjct: 394 GHKMYKEMMRSGCSP-DLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILI 452
Query: 240 DYYLRNG 246
++ G
Sbjct: 453 HSLVKAG 459
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL+ + K E + +EM S PD N +M + + + EE+K
Sbjct: 378 YTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIK 437
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D ++S L V+AG + ++++ D AY +I + ++G +
Sbjct: 438 ARGFLP-DTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKV 496
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ Y++ ++ + ++Y +++ L + L A F+E +S + + + +
Sbjct: 497 NKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSL 556
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
I + K GR++ A + E ++G PN TW D ++ ++ A+ C + D
Sbjct: 557 IDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKD 613
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 1/193 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++Q M+ P Y + AL+ V + + +M+ G + + L ++
Sbjct: 48 LLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG-YEVNVHLLTTLIRVF 106
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
G + A L E+++ D+ Y I +G+ G + ++ + ++ +
Sbjct: 107 SREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDD 166
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +M+ VL L A + F++ E N MI Y G+ + A L ER
Sbjct: 167 VTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLER 226
Query: 223 ARRRGADPNAKTW 235
R +G P+ +
Sbjct: 227 QRAKGCIPSVVAY 239
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 8/259 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA LLE+MK + + + + S++ AK ++ + +E K++ I + Y+ +
Sbjct: 498 KAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLI 557
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V + A V+EEM + G + + T++ L V+A +A + +++
Sbjct: 558 DGFGKVGRVDEAYLVMEEMMQKG-LTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKC 616
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI + ++ + W+ ++ I+Y MI L ++ A
Sbjct: 617 TPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASS 676
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+ + + D N MI + R +A +L E R +G + KT D
Sbjct: 677 LFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALH 736
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+ +CLE+A G
Sbjct: 737 K-------AECLEQAAIVG 748
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 108/269 (40%), Gaps = 36/269 (13%)
Query: 2 TEKAEALLEKMKE-----------------LNLGFS------------------SMPFNS 26
TEK AL E++K + GF+ + +N+
Sbjct: 426 TEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNT 485
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
++ + K+G K +++EMK P TY + LA ++ + A + EE K +G
Sbjct: 486 VIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNG 545
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
+ + +S+L + + G ++A ++E+ + ++ + L+ + ++E
Sbjct: 546 -IELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEA 604
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
++S++ I+Y +I L ++ A ++E + + MI
Sbjct: 605 LVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISG 664
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTW 235
AK G + A L ER R G P++ ++
Sbjct: 665 LAKSGNVAQASSLFERFRASGGIPDSASY 693
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 32 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 91
+ G EK +I+E I P++YTYN + A D SG E V++ MK+DG V +
Sbjct: 235 CRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG-VVYN 293
Query: 92 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
T++ L + V+ G AE+ E+ R D+ Y LI+ + GN+ + ++
Sbjct: 294 KVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFD 353
Query: 152 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
L + ++ +Y +I + + ++ AE E +S V N +I Y ++G
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
++ A + + ++G + T + + R
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNR 446
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 1/231 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE L ++M+E + + SL++ + G+ ++ + E+ + P SYTY +
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ V ++ AE ++ EM+ G V F+ L Y G+ ++A +E +
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKG-VNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ + + + + E + + + +SY N+I V ++ A++
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
F E S + NVMI AY K+G+++ A +L+ G DP++ T+
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 101/236 (42%), Gaps = 11/236 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE L+ +M+ + + + FN+L+ Y + G ++ I M+ D +T N
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A++ + M +G V +++NL +Y + G E+A+R E+ ++
Sbjct: 443 CFNRLKRYDEAKQWLFRM-MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y +I Y + G + E ++ ++ + + +Y ++I ++ A +
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRL 561
Query: 185 FKEW-----ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
F E + TY VMI +K G+ + A L + +R+G + K +
Sbjct: 562 FSEMGLKGLDQNSVTY-----TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVY 612
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 42/288 (14%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EK++ L+++ + + +N+++ Y K + +++ MK ++ + TY +
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------LFEK---- 110
M +S AE++ +EM+ G + +D +++L S G LF++
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERG-IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK 358
Query: 111 ------------------------AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
AE + E++++ + + LI Y + G + E
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 147 YRIWRSL-RLAFPNTANISYLNMIQVLVN-LKDLPGAEK-CFKEWESGCATYDIRVTNVM 203
I+ + + F A++ N I N LK A++ F+ E G + TN +
Sbjct: 419 SMIYDVMEQKGFQ--ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN-L 475
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
I Y KEG +E A+ L +G PNA T+ + Y + G +K A
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ L +M E + S++ + +L+ +Y K G+ E+ + EM + + P++ TYNV
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A I A ++ M+ +G + D T+++L A ++A R E+ +
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANG-MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
++ Y +I+ + G E + ++ ++
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
>gi|356525958|ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Glycine max]
Length = 630
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 130/317 (41%), Gaps = 7/317 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L+++++ L + + ++M + A E+ +MK P+ Y Y+ +
Sbjct: 194 KALELIQELQHNKLQMDGVIYGTIMAVCASNTKWEEAEYYFNQMKDEGHTPNVYHYSSLI 253
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +A + A+ +I++MK +G V + + L +YV+ GLFEK+ L EL++
Sbjct: 254 NAYSACGNYKKADMLIQDMKSEGLVP-NKVILTTLLKVYVKGGLFEKSRELLAELKSLGY 312
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y + + G + E I+ + + ++ MI K A++
Sbjct: 313 AEDEMPYCIFMDGLAKAGQIHEAKLIFDEMMKNHVRSDGYAHSIMISAFCRAKLFREAKQ 372
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
K++E+ YD+ + N M+ A+ + G +E E ++ +P T+ I Y+
Sbjct: 373 LAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETLKKMDELAINPGYNTFHILIKYFC 432
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
R LA ++ G P E + + H Q A +LK +
Sbjct: 433 REKMYLLAYRTMKDMHSKGHQ------PVEELCSSLISHLGQVNAYSEAFSVYNMLKYSK 486
Query: 304 DDLGVEVFEPLIRTYAA 320
+ + E ++ A
Sbjct: 487 RTMCKSLHEKILHILLA 503
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA+ L++ MK L + + +L+ +Y K G EK ++ E+K+ D Y ++
Sbjct: 263 KKADMLIQDMKSEGLVPNKVILTTLLKVYVKGGLFEKSRELLAELKSLGYAEDEMPYCIF 322
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M LA I A+ + +EM ++ V +D S + S + A LF +A++ K+ E +
Sbjct: 323 MDGLAKAGQIHEAKLIFDEMMKN-HVRSDGYAHSIMISAFCRAKLFREAKQLAKDFETTS 381
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
DL ++ + + G E+ R+ +L+
Sbjct: 382 NKYDLVILNSMLCAFCRVG---EMERVMETLK 410
>gi|449502417|ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Cucumis sativus]
Length = 499
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+LM + + G ++ I ++ S+ P+SY+Y++ M L AE + EEMK
Sbjct: 259 FNTLMDCFYRDGFVGRVKEIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMK 318
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
++ D ++ + + +AG +AE +E+E S + LI Y TG++
Sbjct: 319 MK-KLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDV 377
Query: 144 SEVYRIWRSLRLAFPNTANISYL-NMIQVLVNLKDLPGAEKCFK---EWESGCATYDIRV 199
+++ +R + N S L +I++L + L A F E+ S C T +
Sbjct: 378 DSALLVYKDMRRK-QFSLNASTLEGLIRMLCAERRLLEALDVFGFAIEYSSFCPT--MET 434
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
++I +EG++E A +L+ + +G PN K ++ F D Y + G+ ++
Sbjct: 435 FEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKEGNAEMV 486
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 119/310 (38%), Gaps = 17/310 (5%)
Query: 43 IIQEMKASSIMPDSYTYNVWMR----------ALAAVNDISGAERVIEE--MKRDGRVAA 90
I++ +++ I P T N + A A ++ G + IEE +K GRV+
Sbjct: 195 IVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLDCEIEEEHVKLKGRVSP 254
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
+ TF+ L + G + + +L + N+ + +Y L+T+ + E +W
Sbjct: 255 NVHTFNTLMDCFYRDGFVGRVKEIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELW 314
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+++ ++Y +I AE+ ++E E +I Y
Sbjct: 315 EEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDT 374
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
G +++A + + RR+ NA T E + A+D AI+ +
Sbjct: 375 GDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLLEALDVFGFAIEY-----SSFC 429
Query: 271 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLR 330
P+ ET + QE ++GA + +++++ I Y G V
Sbjct: 430 PTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKEGNAEMVEKL 489
Query: 331 RLKMEKVEVS 340
+M ++++S
Sbjct: 490 WKEMHEIQLS 499
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 131/292 (44%), Gaps = 11/292 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E A + ++M+E + + P+NSL+ Y K + + ++ EM A + P +Y+
Sbjct: 101 MMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYS 160
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L D++ A + EM R+ V+ + TF+ L S + + G ++A R ++
Sbjct: 161 PLIAGLCRKGDLASAMELHREMTRNA-VSGNVYTFTALISGFCKDGNMDEATRLFHKMME 219
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + + +I Y + GN+ + ++++ + N +Y ++I V+
Sbjct: 220 SSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMK 279
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A++ + E+ CA + ++ + KEG +AE L + PN+ T+ F D
Sbjct: 280 AKEFVADLENNCAVLNSFSLTALMHGFCKEG---SAEILCKEMLAGHFLPNSYTYNCFLD 336
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
Y G+++ A K + +G + ++ T T ++ F + GA
Sbjct: 337 YLANEGELEKA-----KVLHAAMLEG--CLANTVTFNTLIKGFCMAGQIQGA 381
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 136/304 (44%), Gaps = 12/304 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +LEKMKE+ L +++ +N+L+ Y G+ E +M +MP TYN+
Sbjct: 278 EEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNML 337
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + A+ +I+EM G V D T++ L + Y G +KA E+ ++
Sbjct: 338 IHALFLDCKMDEADGIIKEMSEKGLV-PDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
Y LI + + G + + ++ + + FP+ I + +I ++
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDL--IMFNALIDGHCANGNMDR 454
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A KE + D N ++ +EG++E A EL E + RG P+ ++
Sbjct: 455 AFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLIS 514
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EIL 299
Y + GDMK A ++ + G + P+ T ++ + ++ D AE L E++
Sbjct: 515 GYSKRGDMKDAFRVRDEMLSIG------FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMI 568
Query: 300 KKAV 303
K +
Sbjct: 569 SKGI 572
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 106/262 (40%), Gaps = 3/262 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKA L +M + + S + FN ++ + K G +K I M+A I P+ TYN
Sbjct: 172 TEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNT 231
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + GA + + MK G V D T+ + S + G E+A L++++
Sbjct: 232 IIHGYCSRGRVEGARMIFDLMKCRG-VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEI 290
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPG 180
Y LI Y GNL + +R + +S NM I L +
Sbjct: 291 GLRPTAVTYNTLIDGYCNKGNLEMAFD-YRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ KE D N++I Y + G ++ A L + +G P T+
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIY 409
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ G MK A D EK + G
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKG 431
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ ++++M E L S+ +N L+ Y + G+ +K + EM + I P TY
Sbjct: 348 DEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSL 407
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L+ + A+ + E++ R G + D F+ L + G ++A LKE++
Sbjct: 408 IYVLSKRGRMKQADDLFEKIVRKG-IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + L+ + G + + ++ +ISY +I D+ A
Sbjct: 467 VVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAF 526
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ E S + N +I K ++AE+L + +G PN T+
Sbjct: 527 RVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTY 579
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A L+E+MK + + +N+L++ Y+K G + + EM + P TYN
Sbjct: 487 VEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNA 546
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
++ L + AE++++EM G D T S + I
Sbjct: 547 LIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 6/262 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK-ASSIMPDSYTYNVW 62
+A ALL++M E L + + + +++ K G ++++M+ S I+P+ Y+
Sbjct: 202 EAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAI 261
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +L S A+ + EM+ G + D T++++ + +G + AE+ L+E+ R
Sbjct: 262 IDSLCKDGRHSDAQNLFTEMQEKG-IFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI + + G E ++ + R PNT I+Y +MI L
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT--ITYNSMIDGFCKQDRLDA 378
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE F + + D+ +I Y R+++ EL RRG N T+
Sbjct: 379 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 438
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ GD+ A+D ++ I +G
Sbjct: 439 GFCLVGDLNAALDLSQQMISSG 460
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 119/293 (40%), Gaps = 22/293 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +L+ Y + ++ EM ++ ++ TYN + V D++ A + ++M
Sbjct: 398 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 457
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS-----------AYQF 132
G V D T + L + G + A K ++ D S Y
Sbjct: 458 SSG-VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 516
Query: 133 LITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
LI G E ++ + R P+T I+Y +MI L L A + F S
Sbjct: 517 LICGLINEGKFLEAEELYEEMPHRGIVPDT--ITYSSMIDGLCKQSRLDEATQMFVSMGS 574
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
+ ++ N +I Y K GR+++ EL RRG +A + + + G++
Sbjct: 575 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 634
Query: 251 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
A+D ++ I +G P + TIR + F +++++ A LE L+ +V
Sbjct: 635 ALDIFQEMISSG------VYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSV 681
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A + L+KM++ + + +++L+ L + K +I +K S I PD YN
Sbjct: 73 MFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYN 132
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I+EM G V + ++S L S+YVE F +A E++
Sbjct: 133 SMINVYGKAKLFREARLLIKEMNEAG-VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 191
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N DL+ +I +YGQ + E R++ SLR +SY +++V +
Sbjct: 192 VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGE 251
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N MI Y K E A L + + RG +PNA T+
Sbjct: 252 AIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 311
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 312 IWGKAGKLDRAATLFQKLRSSG 333
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 130/306 (42%), Gaps = 15/306 (4%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + + A +++M++D RV+ D +SNL +
Sbjct: 44 GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD-RVSGDLVLYSNLIEL 102
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 159
+ KA L+ DL AY +I +YG+ E + + + A PN
Sbjct: 103 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 162
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
T +SY ++ V V A F E + D+ N+MI Y + ++ A+ L
Sbjct: 163 T--VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 220
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRT 278
R+ +PN ++ Y G+ +L + + R D + V + T I+
Sbjct: 221 FWSLRKMDIEPNVVSYNTILRVY---GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 277
Query: 279 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEK 336
+ + E EK + + E+ + ++ + + +I + AG+ + + ++L+
Sbjct: 278 YGKTMEHEKATNLVQ---EMQSRGIEPNAI-TYSTIISIWGKAGKLDRAATLFQKLRSSG 333
Query: 337 VEVSEA 342
VE+ +
Sbjct: 334 VEIDQV 339
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 285 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 344
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A V + A+R++ E+K + + +I +AG E+A ++
Sbjct: 345 IVAYERVGLMGHAKRLLHELKLPDNIPRETAI-----TILAKAGRTEEATWVFRQAFESG 399
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNL----K 176
+D+S + +I LY + V ++ +R A FP++ N+I +++N +
Sbjct: 400 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDS------NVIAMVLNAYGKQR 453
Query: 177 DLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ A+ ++E E GC D V M+ Y+ + E E L +R +DPN +
Sbjct: 454 EFEKADTVYREMQEEGCVFPD-EVHFQMLSLYSSKKDFEMVESLFQRLE---SDPNVNSK 509
Query: 236 EI 237
E+
Sbjct: 510 EL 511
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + + +NS++ +Y K + +I+EM + ++P++ +Y+ +
Sbjct: 111 KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 170
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ A V EMK + A D TT + + +Y + + ++A+R L +
Sbjct: 171 SVYVENHKFLEALSVFAEMK-EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 229
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y ++ +YG+ E ++R ++ ++Y MI++ + A
Sbjct: 230 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 289
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E +S + + +I + K G+L+ A L ++ R G + + ++ Y
Sbjct: 290 LVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYE 349
Query: 244 RNGDM 248
R G M
Sbjct: 350 RVGLM 354
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F ++ LY++ + + ++M+ + PDS + + A + A+ V EM+
Sbjct: 407 FGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQ 466
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G V D F L S+Y FE E + LE+ + + LY + L
Sbjct: 467 EEGCVFPDEVHFQML-SLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKL 525
Query: 144 SEVYRIWRSLR 154
++ R+ +R
Sbjct: 526 NDASRVMNRMR 536
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 11/259 (4%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L++M++ + + +++L+ L K K +I +K S I PD YN +
Sbjct: 192 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGK 251
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A ++ EM+ G V D ++S L S+YVE F +A E+ N DL
Sbjct: 252 ARLFREARMLVHEMREVG-VLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLM 310
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF--- 185
+I +YGQ + E R++ S+R +SY +++V + A F
Sbjct: 311 TCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLM 370
Query: 186 --KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
KE E TY N MI Y K E A L + ++RG +PNA T+ +
Sbjct: 371 QRKEIEQNVVTY-----NTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWG 425
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+ G + A +K +G
Sbjct: 426 KAGKLDRAAMLFQKLRSSG 444
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 134/306 (43%), Gaps = 15/306 (4%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + + + +++M++D RV+ D +SNL +
Sbjct: 155 GLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQD-RVSGDLVLYSNLIEL 213
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPN 159
+ + KA L+ DL AY +I ++G+ E + +R P+
Sbjct: 214 SRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPD 273
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
T +SY ++ V V + A F E + D+ N+MI Y + ++ A+ L
Sbjct: 274 T--VSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRL 331
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRT 278
R+ G +PN ++ Y G+ +L + + R + + V + T I+
Sbjct: 332 FWSMRKMGIEPNVVSYNTLLKVY---GEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKI 388
Query: 279 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEK 336
+ + E EK + + E+ K+ ++ + + +I + AG+ + ++ ++L+
Sbjct: 389 YGKSLEHEKATNLVQ---EMQKRGIEPNAI-TYSTIISIWGKAGKLDRAAMLFQKLRSSG 444
Query: 337 VEVSEA 342
VE+ +
Sbjct: 445 VEIDQV 450
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 121/291 (41%), Gaps = 11/291 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ +M E N M N ++ +Y + ++ + M+ I P+ +YN +
Sbjct: 292 EALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLL 351
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ A + M+R + + T++ + IY ++ EKA ++E++ R
Sbjct: 352 KVYGEAELFGEAIHLFRLMQRK-EIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGI 410
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y +I+++G+ G L +++ LR + + Y MI + A++
Sbjct: 411 EPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 470
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ + C DI + I A+ GR+E A + +A G + + + +
Sbjct: 471 LLHDLK--CP--DIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFS 526
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 294
RN V+ EK RG G + P S+ I + + + ++ + A+
Sbjct: 527 RNKRPANVVEVFEKM----RGAG--YFPDSDVIALVLNAYGKLREFEKADA 571
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/237 (18%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M++ + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 396 EKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTM 455
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ ++K + D I AG E+A ++ +
Sbjct: 456 IVAYERAGLVAHAKRLLHDLKCPDIIPRD-----TAIKILARAGRIEEATWVFRQAFDAG 510
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
+D+S ++ +I L+ + + V ++ +R A FP++ I+ + + L++
Sbjct: 511 EVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALV--LNAYGKLREFEK 568
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A+ ++E + + V M+ Y E L E+ +DPN E+
Sbjct: 569 ADAVYREMQEEECVFPDEVHFQMLSLYGARKDFIMVESLFEKL---DSDPNINKKEL 622
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ LM + K E + +++EM+A + P+ Y+Y + +R L A R++ +M+
Sbjct: 233 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 292
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T + L + +AG A+ +++ + D Y L+ +G G+
Sbjct: 293 NEG-CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 351
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
V IW +++ N ++Y +I L + + A + F E + + N +
Sbjct: 352 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 411
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
I + K R +A EL + G PN T +F +YY ++G+
Sbjct: 412 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 455
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 45/253 (17%)
Query: 9 LEKMKELNL------GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
LE K +++ G++ + F + Y K+G K + MK+ I+PD N
Sbjct: 425 LELFKHMDIHGPKPNGYTHVLF---INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 481
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ LA + A+RV E+K G V+ D T++ + +A F++A + ++ N
Sbjct: 482 LFGLAKSGRLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 540
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ A LI + G E +RI+ L+ +NL+ G
Sbjct: 541 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK-----------------EMNLEPTDG-- 581
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
TY N ++ +EG+++ L E PN T+ D
Sbjct: 582 -----------TY-----NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCL 625
Query: 243 LRNGDMKLAVDCL 255
+NG + A+D L
Sbjct: 626 CKNGAVNDALDML 638
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 92/238 (38%), Gaps = 38/238 (15%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L++K K + + +NSL+ + + EMK PD +TYN+ +
Sbjct: 773 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 832
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A+ I +V EEM R G + + T++ + S V++ E+A
Sbjct: 833 DAMGKSMRIEEMLKVQEEMHRKG-YESTYVTYNTIISGLVKSRRLEQA------------ 879
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
I LY + + F T +Y ++ L+ + AE
Sbjct: 880 ----------IDLY------------YNLMSQGFSPTP-CTYGPLLDGLLKAGRIEDAEN 916
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F E E GC + + N+++ + G E L + +G +P+ K++ I D
Sbjct: 917 LFNEMLEYGCKA-NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/288 (18%), Positives = 103/288 (35%), Gaps = 36/288 (12%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + KMK+ + + + +L+ + G + + I MKA + Y +
Sbjct: 319 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 378
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
AL V + A + +EMK+ G V + ++++L S +++A F A K ++
Sbjct: 379 ALCQVGRVFEALEMFDEMKQKGIVPEQY-SYNSLISGFLKADRFGDALELFKHMDIHGPK 437
Query: 125 RDLSAYQFLITLYG-----------------------------------QTGNLSEVYRI 149
+ + I YG ++G L R+
Sbjct: 438 PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 497
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
+ L+ + I+Y MI+ A K F + D+ N +I K
Sbjct: 498 FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYK 557
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
GR + A + + + +P T+ R G +K + LE+
Sbjct: 558 AGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 605
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 3/193 (1%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+++ AK+G + E+KA + PD+ TY + ++ + + A ++ +M
Sbjct: 479 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 538
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
+ V D ++L +AG ++A R +L+ N Y L+ G+ G +
Sbjct: 539 NNCV-PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVK 597
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVM 203
EV + + + I+Y ++ L + A + + GC D+ N +
Sbjct: 598 EVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTV 656
Query: 204 IGAYAKEGRLENA 216
I KE R A
Sbjct: 657 IYGLVKEERYNEA 669
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 1/153 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE L +MKEL G +N L+ K+ E++ + +EM TYN
Sbjct: 805 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYN 864
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A + + G + T+ L ++AG E AE E+
Sbjct: 865 TIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 923
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ + Y L+ + GN +V +++ +
Sbjct: 924 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 956
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 92/234 (39%), Gaps = 3/234 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LLE+M N + + +N+++ K G ++ M +PD +YN + L
Sbjct: 602 LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 661
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE-LENRNAHRD 126
+ A + +MK+ + D+ T + +V+ GL ++A +K+ + D
Sbjct: 662 KEERYNEAFSIFCQMKK--VLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTD 719
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
S+ L+ + + + + + + +I+ L K A + K
Sbjct: 720 RSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVK 779
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+++S + + N +I E ++ AE L + G P+ T+ + D
Sbjct: 780 KFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 833
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 84/223 (37%), Gaps = 1/223 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N ++ L G + + M+ + + T+ L + A + MK
Sbjct: 129 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 188
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V +T ++ L V++G +A + + + Y L+ +G+ ++
Sbjct: 189 AGIVLNAYT-YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVE 247
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
V + R + SY I+VL K A + + E+ D+ V+I
Sbjct: 248 TVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLI 307
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
GR+ +A+++ + ++ P+ T+ D + NGD
Sbjct: 308 QVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 350
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 6/231 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ G E+ ++ +M+ + P++ TYN + A ++ GAERV+ M+
Sbjct: 13 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 72
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + TF+++ + +AG E A + E+ D+ +Y L++ Y + G L
Sbjct: 73 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 132
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVT 200
E ++ + R P+ +++ ++I +L A + E G ++ T
Sbjct: 133 HESLAVFSEMTQRGLVPDV--VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 190
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
+I + K+G L++A E R+ G P+ + + Y + G M LA
Sbjct: 191 -ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FNS++ K G E + EM + PD +YN + V + + V EM
Sbjct: 84 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 143
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G V D TF++L +AG E+A + ++ R + + LI + + G L
Sbjct: 144 QRGLVP-DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 202
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ +R + + Y +I L + A + +E E+ D+ + +
Sbjct: 203 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 262
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTW 235
I Y K G L++A +L ++ ++G P+A T+
Sbjct: 263 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 294
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 105/234 (44%), Gaps = 5/234 (2%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A+ +M + L + F SL+ K G+ E+ A++ +M+ + + T+ +
Sbjct: 137 AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGF 196
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A +EEM++ G + ++ L + Y + G + A ++E+E + D
Sbjct: 197 CKKGFLDDALLAVEEMRKCG-IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 255
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y +I+ Y + GNL +++ + + + P+ I+Y ++I+ L K L A +
Sbjct: 256 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA--ITYSSLIRGLCEEKRLNDACEL 313
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
F+ D +I + KEG +E A L + R+G P+ T+ +
Sbjct: 314 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 110/260 (42%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + ++M L + +N+L++ Y K G + A+ EM ++PD T+
Sbjct: 98 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 157
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A ++ +M+ G + + TF+ L + + G + A A++E+
Sbjct: 158 IHATCKAGNLEQAVALVAQMRERG-LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 216
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI Y + G + + R + ++Y +I + +L A
Sbjct: 217 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 276
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ ++ D + +I +E RL +A EL E + G P+ T+ D +
Sbjct: 277 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 336
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G+++ A+ ++ I G
Sbjct: 337 CKEGNVEKALSLHDEMIRKG 356
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 41/277 (14%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 106
M + P+ YTYN+ +RAL A + A V+ +M+ G A + T++ L + + AG
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAG-CAPNAVTYNTLVAAFCRAG 59
Query: 107 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 166
+ AER +++L + GN A PN +++
Sbjct: 60 ELDGAER-------------------VVSLMREEGN-------------AKPNL--VTFN 85
Query: 167 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 226
+M+ L + GA K F E D+ N ++ Y K G L + + +R
Sbjct: 86 SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 145
Query: 227 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 286
G P+ T+ + G+++ AV + + + G + T + F ++
Sbjct: 146 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG------LRMNEVTFTALIDGFCKK 199
Query: 287 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+D A +E ++K V + LI Y GR
Sbjct: 200 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%), Gaps = 18/241 (7%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L E M +L + + +L+ + K G+ EK ++ EM ++PD TY+V + L+
Sbjct: 313 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 372
Query: 68 AVNDISGAERVIEEMKRDGRVA--------------ADWTTFSNLASIYVEAGLFEKAER 113
A R++ ++ + V A++ + L + GL ++A++
Sbjct: 373 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 432
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAF-PNTANISYLNMIQV 171
+ + +RN D S Y LI + + GN+ + + LR F PN+ S +++++
Sbjct: 433 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST--STISLVRG 490
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
L + A+ ++ + C D + +I KEG ++ ++ R G P+
Sbjct: 491 LFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550
Query: 232 A 232
+
Sbjct: 551 S 551
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 12/275 (4%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
SL+ + ++G K I++ ++ S +PD TYNV + +I A +V+E M
Sbjct: 147 SLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS-- 204
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
VA D T++ + ++G ++A L R + D+ Y LI + +
Sbjct: 205 --VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQ 262
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMI 204
++ +R ++Y +I + L A K GC ++ N+++
Sbjct: 263 AMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQP-NVITHNIIL 321
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
+ GR +AE L R+G P+ T+ I ++ R + A+D LEK G
Sbjct: 322 RSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG-- 379
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+P+S + + F QEK +D A +LEI+
Sbjct: 380 ----CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM 410
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 9/236 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL++M++ + +N L+ K G ++ + M P+ T+N+ +
Sbjct: 262 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIIL 321
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R++ + AER++ +M R G + TF+ L + L +A L+++
Sbjct: 322 RSMCSTGRWMDAERLLADMLRKG-CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGC 380
Query: 124 HRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y L+ + Q + E I S R +P+ ++Y ++ L
Sbjct: 381 MPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS-RGCYPDI--VTYNTLLTALCKDGKADA 437
Query: 181 AEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A + + S GC+ I N +I K G+ E A EL E RR+G P+ T+
Sbjct: 438 AVEILNQLSSKGCSPVLI-TYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITY 492
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+T K G + I+ ++ + P TYN + L V A ++EEM+
Sbjct: 422 YNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMR 481
Query: 84 RDGRVAADWTTFSNL 98
R G + D T+S L
Sbjct: 482 RKG-LKPDIITYSTL 495
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 13/320 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K L+EKMK+ L +S + S++ L + + EM I+PD+ Y
Sbjct: 721 DKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTL 780
Query: 63 MRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ DI A + EM RD + D T++ + S + + G +A + E+ R
Sbjct: 781 VDGFCKRGDIRAASKFFYEMHSRD--ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCR 838
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ + L+ Y + G++ + +R+ + A + ++Y +I L DL A
Sbjct: 839 GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 898
Query: 182 EKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ E W+ G +I N ++ K G +E A +L G + + T+ D
Sbjct: 899 NELLHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE-IL 299
Y ++G+M A + L + + G P+ T M F ++ E L +L
Sbjct: 958 AYCKSGEMDKAQEILTEMLGKGLQ------PTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1011
Query: 300 KKAVDDLGVEVFEPLIRTYA 319
K + F L++ Y
Sbjct: 1012 AKGIAP-NATTFNCLVKQYC 1030
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 132/301 (43%), Gaps = 11/301 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++++ Y + G +K+ +I++MK + P+SYTY + L + ++ AE EM
Sbjct: 707 YSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI 766
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D ++ L + + G A + E+ +R+ D+ Y +I+ + Q G++
Sbjct: 767 GQG-ILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 825
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNV 202
E +++ + I++ ++ + A + ++GC+ ++
Sbjct: 826 VEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSP-NVVTYTT 884
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+I KEG L++A EL + G PN T+ + ++G+++ AV + G
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV------G 938
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAA 321
+ + T T M + + ++D A+ L E+L K + V F L+ +
Sbjct: 939 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIV-TFNVLMNGFCLH 997
Query: 322 G 322
G
Sbjct: 998 G 998
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL +M ++ L + +NS++ K+G+ E+ ++ E +A+ + D+ TY
Sbjct: 896 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A ++ A+ ++ EM G + TF+ L + + G+ E E+ L + +
Sbjct: 956 MDAYCKSGEMDKAQEILTEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1014
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + + L+ Y NL I++ + +Y N+++ N +++ A
Sbjct: 1015 IAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAW 1074
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E + + + +V+I + K + A E+ ++ RR G + + ++ FSD
Sbjct: 1075 FLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTK 1134
Query: 243 LRNGDMKLAVDCLEKAID 260
+ VD +++ I+
Sbjct: 1135 YKGKRPDTIVDPIDEIIE 1152
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/264 (18%), Positives = 99/264 (37%), Gaps = 1/264 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +M ++ + + ++++ + + G + + EM + PD T+ M
Sbjct: 793 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMN 852
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
I A RV M + G + + T++ L + G + A L E+
Sbjct: 853 GYCKAGHIKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 911
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y ++ ++GN+ E ++ A N ++Y ++ ++ A++
Sbjct: 912 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 971
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E I NV++ + G LE+ E+L +G PNA T+ Y
Sbjct: 972 LTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCI 1031
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGK 268
++K A + G GK
Sbjct: 1032 RNNLKAATAIYKDMCSRGVEPDGK 1055
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/261 (17%), Positives = 103/261 (39%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A + + E+ + ++ +N ++ + G + ++ M+ PD +Y+
Sbjct: 650 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYST 709
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ++ ++IE+MK+ G + + T+ ++ + +AE A E+ +
Sbjct: 710 VINGYCRFGELDKVWKLIEKMKQKG-LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQ 768
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y L+ + + G++ + + + ++Y +I + D+ A
Sbjct: 769 GILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 828
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K F E DI ++ Y K G +++A + + G PN T+ D
Sbjct: 829 GKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDG 888
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ GD+ A + L + G
Sbjct: 889 LCKEGDLDSANELLHEMWKIG 909
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 2/190 (1%)
Query: 60 NVWMRALAA-VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
NV++ L+ N + A V E G V + +++ + + G +A L +
Sbjct: 637 NVYLARLSKDCNKTATAIIVFREFPEVG-VCWNVASYNIVIHFVCQLGRINEAHHLLLLM 695
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
E + D+ +Y +I Y + G L +V+++ ++ + +Y ++I +L + L
Sbjct: 696 ELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKL 755
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
AE+ F E D V ++ + K G + A + R P+ T+
Sbjct: 756 AEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 815
Query: 239 SDYYLRNGDM 248
+ + GDM
Sbjct: 816 ISGFCQIGDM 825
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 142/337 (42%), Gaps = 16/337 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE + KMKEL S N L+ LY+ +KI ++ M+ +I P TY+ +
Sbjct: 260 KAEDIFNKMKELKFPTSVFACNQLLLLYSMHDR-KKISDVLLLMERENIKPSRATYHFLI 318
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ DI+G E+++E +K +G + D S LA Y+ AGL E+A+ +KE+E +
Sbjct: 319 NSKGLAGDITGMEKIVETIKEEG-IELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGL 377
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV---NLKDLPG 180
+ + L+ LY G+ V R+ R + N Y N I + LK++
Sbjct: 378 QQTPWVCRSLLPLYADIGDSDNVRRLSRFV------DQNPRYDNCISAIKAWGKLKEVEE 431
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE F+ + + ++ Y + L +L +R G TW
Sbjct: 432 AEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVK 491
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y++ G++ A L +A K P T + + + DV E +K
Sbjct: 492 LYIKAGEVGKAELILNRATKD-----NKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMK 546
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+A + +E ++ Y A + M+ R+K + V
Sbjct: 547 RASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNV 583
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 133/307 (43%), Gaps = 13/307 (4%)
Query: 15 LNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG 74
+++G S+ ++ + + G + ++ EM A ++P +TYN + A D G
Sbjct: 178 VDIGVQSLTI--VVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREG 235
Query: 75 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
+ ++ M+R+G V A T++ L Y + +AE+ +E+ RN D+ Y +I
Sbjct: 236 VDEILGLMEREG-VVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMI 294
Query: 135 TLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
+ + GN+ ++ + R PNT L I + + AE +E +
Sbjct: 295 SWNCRAGNVRRASALFDEMICRGIVPNTXTFGAL--ISGVCKAGQMEAAEILLEEMQCKG 352
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
++ + N M+ Y K G ++ A L++ R+G + + T+ I + + + A
Sbjct: 353 VDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAK 412
Query: 253 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 312
L ++ G P+ T TF+ + QE ++ E FL ++K + +
Sbjct: 413 RVLNVMVEKG------VAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYN 466
Query: 313 PLIRTYA 319
LI Y+
Sbjct: 467 TLIDAYS 473
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 5/236 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LLE+M+ + + + FN++M Y K G ++ + M+ D +TYN+
Sbjct: 339 EAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNIL 398
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L ++ A+RV+ M G VA + T + IY + G + ER L+ +E R
Sbjct: 399 ASGLCKLHRYEEAKRVLNVMVEKG-VAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y LI Y + + + + + + + P+ +Y ++I + +
Sbjct: 458 VVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDV--FTYTSLIHGECIVDKVDE 515
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A K F E +++ +I +KEGR + A +L + R G P+ + +E
Sbjct: 516 ALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFE 571
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 5/234 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE + E+M E N+ + S+++ + G+ + A+ EM I+P++ T+ +
Sbjct: 270 EAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALI 329
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AE ++EEM+ G V + F+ + Y + G+ ++A R +E +
Sbjct: 330 SGVCKAGQMEAAEILLEEMQCKG-VDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGF 388
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y L + + E R+ + + PN ++ I++ +L
Sbjct: 389 EADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNV--VTCATFIEIYCQEGNLAEP 446
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
E+ + E +I N +I AY+K +++ A LK +G P+ T+
Sbjct: 447 ERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTY 500
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 2/245 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKA + ++MK ++ F ++ +Y K P + EMK+ P+ TY
Sbjct: 404 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 463
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A AE V EEM++ G D ++ L Y AGL + A +++
Sbjct: 464 LVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM 522
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D ++Y L+ YG+ G + ++ L+ + S++ ++ +
Sbjct: 523 GCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRC 582
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ + T D N M+ AYA+ GRL++ E L RRG D + T+ + +
Sbjct: 583 EEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRG-DADVGTYNVAVNA 641
Query: 242 YLRNG 246
Y R G
Sbjct: 642 YGRAG 646
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 112/294 (38%), Gaps = 8/294 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ +MK + + + +L+ +A+ G EK + +EM+ + PD Y YN M A +
Sbjct: 445 VFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYS 504
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
GA + M+ G D +++ L Y AGL E AE +EL+ R +
Sbjct: 505 RAGLPQGASEIFSLMQHMG-CEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTM 563
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
++ L+ + ++GN + + L + + M+ L E+
Sbjct: 564 KSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAA 623
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
E D+ NV + AY + G + E RG + TW Y R +
Sbjct: 624 MERR-GDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKE 682
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
V +E+ +D G P + T R + E+ V+ + + K
Sbjct: 683 YGRCVGMVEEMVDAG------CYPDAGTARVLLAACSDERQVEQVTAIVRSMHK 730
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 133/320 (41%), Gaps = 10/320 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE++ + E + + L+ Y G + +I EM+ I P++ YN ++
Sbjct: 336 KAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYL 395
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L A V + MKR+ R A+ TF+ + ++Y +A + + E+++
Sbjct: 396 DGLLKARCTEKAVEVYQRMKRE-RCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGC 454
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAE 182
++ Y L+ + + G + ++ ++ A + ++ N + + LP GA
Sbjct: 455 KPNICTYTALVNAFAREGLCEKAEEVFEEMQQA-GHEPDVYAYNALMEAYSRAGLPQGAS 513
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F + D N+++ AY + G E+AE + E ++RG P K+ + +
Sbjct: 514 EIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAH 573
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R+G+ + + + +G P + + + + + +D E L +++
Sbjct: 574 ARSGNATRCEEVMAQLHKSG------LTPDTFALNAMLNAYARAGRLDDMERLLAAMERR 627
Query: 303 VDDLGVEVFEPLIRTYAAAG 322
D V + + Y AG
Sbjct: 628 -GDADVGTYNVAVNAYGRAG 646
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 92/223 (41%), Gaps = 1/223 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ Y K K +I + + +P TY + +RA + AE VI EM+
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMR 380
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + T ++ ++A EKA + ++ + + +I +YG+
Sbjct: 381 EHG-IPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQP 439
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+++ ++ +Y ++ AE+ F+E + D+ N +
Sbjct: 440 MSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNAL 499
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ AY++ G + A E+ + G +P+ ++ I D Y R G
Sbjct: 500 MEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAG 542
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 139/341 (40%), Gaps = 15/341 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++L M+ G + + +N+L+ + + G + ++ M+ + P+ T+N
Sbjct: 207 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSM 266
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A +V +EM R+G +A D +++ L Y +AG +A E+ +
Sbjct: 267 VNGMCKAGKMEDARKVFDEMVREG-LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + LI + + GNL + R +R +++ +I L A
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + + N +I Y GR++ A EL +G P+ T+ Y
Sbjct: 386 LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+N D A + ++ ++ G +P + T + +R EK + A +L K
Sbjct: 446 CKNCDTHSAFELNQQMLEKG------VLPDAITYSSLIRVLCGEKRLSDA----HVLFKN 495
Query: 303 VDDLGVE----VFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 339
+ LG++ + LI + G + KM K V
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGV 536
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 109/245 (44%), Gaps = 18/245 (7%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L + M +L L + SL+ + K G+ E ++ +M + ++PD TY+V +
Sbjct: 489 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLIN 548
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAAD--------WTTFSNLASI------YVEAGLFEK 110
L+ A++++ ++ + + A+ + L S+ + GL +
Sbjct: 549 GLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 608
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAF-PNTANISYLNM 168
A++ + + +RN + D S Y LI + + GN+ + + L+ F PN+ S +++
Sbjct: 609 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNST--STISL 666
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
I+ L + A++ ++ + C+ D + +I EG ++ ++ + G
Sbjct: 667 IRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 726
Query: 229 DPNAK 233
P+ +
Sbjct: 727 LPSPR 731
>gi|224073298|ref|XP_002304067.1| predicted protein [Populus trichocarpa]
gi|222841499|gb|EEE79046.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 117/278 (42%), Gaps = 10/278 (3%)
Query: 9 LEKMKELN---LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
L+ ++ELN L S+ + +L+ + A E+ + +MK P+ Y Y+ + A
Sbjct: 11 LDLVQELNYNGLQMDSVMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIYHYSSLLNA 70
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
A+ + AE ++++MK G V + L +YV LFEK+ L EL+ +
Sbjct: 71 YASGGNYKKAEELVQDMKSSGLVPNKVMLTTQL-KVYVRGRLFEKSRDLLVELDTLGFAK 129
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D Y L+ +TG + E ++ ++ SY MI A++
Sbjct: 130 DEMPYCLLMDGLAKTGCIDEARSVFNEMKEKCVKPGGYSYSIMISSFCRGGLFEEAKELA 189
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+E+E+ YD+ ++N ++ AY + G +E+ + P+ T+ I Y+ +
Sbjct: 190 EEFEAKYDKYDVAISNAILCAYCRAGEMESVMRTMRKMDELAISPDYNTFHILIKYFCKE 249
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
LA +E G P+ E + + H
Sbjct: 250 KLYMLAYQTMEDMHRKGHQ------PAEELCSSLLFHL 281
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EK+ LL ++ L MP+ LM AKTG ++ ++ EMK + P Y+Y+
Sbjct: 111 LFEKSRDLLVELDTLGFAKDEMPYCLLMDGLAKTGCIDEARSVFNEMKEKCVKPGGYSYS 170
Query: 61 VWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ + + A+ + EE K D D + + Y AG E R ++++
Sbjct: 171 IMISSFCRGGLFEEAKELAEEFEAKYD---KYDVAISNAILCAYCRAGEMESVMRTMRKM 227
Query: 119 ENRNAHRDLSAYQFLITLY 137
+ D + + LI +
Sbjct: 228 DELAISPDYNTFHILIKYF 246
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL +++++ L + +N+L++ ++ + + A+ +EM AS PD +TYN +
Sbjct: 122 LLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHG 181
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AER+ E+ G D T+++L + + G + ER +EL +D
Sbjct: 182 RCGKAQDAERMFRELVEKG-FKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDG 240
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +YG+ G L ++ +R ++Y +I L + + A K +E
Sbjct: 241 ITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEE 300
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + +I AYAK GR E A G P+ + + D R+GD
Sbjct: 301 MADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGD 360
Query: 248 MK 249
M+
Sbjct: 361 MR 362
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%), Gaps = 5/223 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+++ +Y K G + + EM+A PD+ TY V + +L ++ IS A +V+EEM
Sbjct: 243 YNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMA 302
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
D + TFS L Y + G E+A R + D AY ++ + ++G++
Sbjct: 303 -DAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDM 361
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ +++++ N Y M+ L + E ++ E C V++++
Sbjct: 362 RKLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNPQLVSSIL 421
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
I A + +L ++A +G +P++K+ D Y G
Sbjct: 422 IKAEC----ISQGAKLLKKACLQGHEPDSKSLLSILDAYETTG 460
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 9/255 (3%)
Query: 16 NLGFSSMP------FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
+L F +P FN++M +YA++G + + ++ M+ + PD ++N + A A
Sbjct: 52 HLRFPHLPGATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKS 111
Query: 70 NDIS--GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ A ++ E+++ G + D T++ L S + + A +E+ DL
Sbjct: 112 GCLAPGSAFDLLLEVRQVG-LRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDL 170
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +++++G+ G + R++R L ++Y +++ D E+ +E
Sbjct: 171 WTYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEE 230
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
D N MI Y K GRL+ A L + R G P+A T+ + D +
Sbjct: 231 LVRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDR 290
Query: 248 MKLAVDCLEKAIDTG 262
+ A LE+ D G
Sbjct: 291 ISDAGKVLEEMADAG 305
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ +Y++ PE+ ++ EM + P +Y + A AE++ EE++
Sbjct: 802 YNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIR 861
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + + L IY +A KAE+ L ++ ++ L+T YG G+
Sbjct: 862 SKG-YRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHP 920
Query: 144 SEVYRIWRSLRLAFPNTANISY 165
E ++ SL+ + + + Y
Sbjct: 921 DEAEKVLNSLKSSSLEVSTLPY 942
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 106/280 (37%), Gaps = 42/280 (15%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A + M+ + + S + S+++ Y K G PE ++ E S I + + V M
Sbjct: 537 EASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTM 596
Query: 64 -RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE---------- 112
A + AE ++ +K++ + D ++ L Y E+GL+E A
Sbjct: 597 IEAYGKIKLWQHAENFVKGLKQEPSI--DRRIWNALIHAYAESGLYEHARAVFDIMIEKG 654
Query: 113 ------------RAL-------------KELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
RAL +EL++ S ++ + + G++ EV
Sbjct: 655 PLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVM 714
Query: 148 RIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+I+ ++ A PN Y +MI +L K E E E D+ + N ++
Sbjct: 715 KIYNGMKEAGYLPNMH--IYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLL 772
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
Y G + E+ G +PN T+ Y RN
Sbjct: 773 MYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRN 812
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL MKE + + + LMT Y GHP++ ++ +K+SS+ + Y+
Sbjct: 887 KAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVF 946
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 101
A D + + EMK DG V D WT F AS+
Sbjct: 947 NAYLKNGDYNLGITKLLEMKADG-VKPDHQVWTCFIRAASL 986
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 44/247 (17%), Positives = 96/247 (38%), Gaps = 37/247 (14%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
N+L+ +Y G+ +K + + + + P+ TYN + + ++ EM
Sbjct: 767 LNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMG 826
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G + ++ +L + +A L+E+AE+ +E+ ++ + S Y L+ +Y N
Sbjct: 827 KKG-LTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNH 885
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
S+ ++ S++ E G I +++
Sbjct: 886 SKAEQLLASMK----------------------------------EDGIEP-TIATMHIL 910
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV-DCLEKAIDTG 262
+ +Y G + AE++ + + + + + YL+NGD L + LE D
Sbjct: 911 MTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGV 970
Query: 263 RGDGGKW 269
+ D W
Sbjct: 971 KPDHQVW 977
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 33/218 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE++ +KMK+L L P+NS+ +LY+ G+ +K+ I++EMK +++ D+ T N
Sbjct: 163 KKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVDEILREMKENNVELDNVTVNNA 222
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R AAV+D++ ++ + + K R+ D T +A Y
Sbjct: 223 LRVYAAVSDVATMDKFLADRKEITRL--DGLTMLAMAKAYE------------------- 261
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L++LYG+ G + +V+R+W + A N + +I L+ L D GAE
Sbjct: 262 ----------LMSLYGEAGEIEDVHRVWDKYK-ATRQKDNEEFRTLIGSLLKLGDTKGAE 310
Query: 183 KC-FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
K + EWE +D R+ ++++ Y ++G + A++L
Sbjct: 311 KIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMKADKL 348
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEA+ EKM+EL L PFNSL++LY+ G + ++ +MK +I PD T N +
Sbjct: 467 KAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVL 526
Query: 64 RALAAVNDISGAERV 78
RA A + I E+V
Sbjct: 527 RANAYILAIDSMEKV 541
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 134/305 (43%), Gaps = 16/305 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE L +M++ + N+ + + + A+ ++++ P+ TYN
Sbjct: 156 EKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRM 215
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + S AE + M+R + TF+ L + + GL+ +AER +L+ +
Sbjct: 216 IVIYGKAGEPSKAEMLYRSMRR-AMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG 180
D AY L+ Y Q G+ + I+++++ FP+T + + +L+N G
Sbjct: 275 YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHN------ILINAYGRAG 328
Query: 181 ----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
AEK FK +S + +++ +++ AYA+ GR+E AEEL R G P+ +
Sbjct: 329 LYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYN 388
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ Y +G + L K + + + P T T ++ + Q + AE
Sbjct: 389 ALINAYGVSGRHEDMEALLAKMV---KSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELF 445
Query: 297 EILKK 301
+ L +
Sbjct: 446 QGLAR 450
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 4/262 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE L M+ + F +LM +A+ G + +++ PD Y YN M
Sbjct: 227 KAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALM 286
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A + +GA + + M+R+G D + + L + Y AGL+E AE+ K +++
Sbjct: 287 EAYSQGGSPAGALEIFQTMQRNG-CFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGF 345
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY---LNMIQVLVNLKDLPG 180
+L + L++ Y + G + E + ++ + Y +N V +D+
Sbjct: 346 SPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEA 405
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ S DI N +I YA+ G + AEEL + R P+A TW
Sbjct: 406 LLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMG 465
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y + + L+K +++G
Sbjct: 466 GYAKKKLYRKCTSILKKMLESG 487
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 91/250 (36%), Gaps = 42/250 (16%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE----MKASSIMPDS 56
M E A A+ + L G + +++ M++ + + P + Q ++ ++ PD
Sbjct: 47 MQEDATAIWNALDNLPRGHDT--WDNFMSVVVHFWNYKDWPRVTQMCEWVLQGTAFRPDL 104
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
YN+ + A +I AE+ M+ + + TF L + Y AG FEKAE
Sbjct: 105 GCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEELFV 163
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+++ R P N + VL + K
Sbjct: 164 QMQKRGYSPG-------------------------------PLACN----TFLHVLEDAK 188
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ AE F++ E +I N MI Y K G AE L RR PN T+
Sbjct: 189 EYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFT 248
Query: 237 IFSDYYLRNG 246
+ + R G
Sbjct: 249 ALMNAFARQG 258
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Query: 167 NMIQVLV---NLKDLPGAEKCFKEWESGCATY--DIRVTNVMIGAYAKEGRLENAEELKE 221
N + V+V N KD P + EW + D+ N++I AY K +E+AE+
Sbjct: 70 NFMSVVVHFWNYKDWPRVTQ-MCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFN 128
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
R + PN +T+ + + Y G + A + + G + P TF+
Sbjct: 129 RMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRG------YSPGPLACNTFLH 182
Query: 282 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV-MLRR 331
E K+ AE L+K + ++ + +I Y AG S ML R
Sbjct: 183 VLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYR 233
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 2/241 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A + ++M + S + +N L+ Y K G ++ ++ M+A+++ PD+ T+N +
Sbjct: 123 QARKIFDEMMIEGVKPSIVTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLI 182
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R I E+ E + R G + D T ++L S Y AGLFEK E + ++ N
Sbjct: 183 RVFGLNCKIPEMEQAYEGLLRQG-LQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNY 241
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y ++ YG+ G + ++ W+ ++ F + ++ +M+ EK
Sbjct: 242 PMTRITYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEK 301
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
++ A D V N I A+ + E+ E++ E + +G P+ T+ I Y
Sbjct: 302 VMRQARYFDAA-DTAVYNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILIGAYE 360
Query: 244 R 244
R
Sbjct: 361 R 361
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 2/221 (0%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+T+ AK + + + + P + + + N A + E M+
Sbjct: 40 LLTMLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTVFTQSNQFKKALEIFESMRLYE 99
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
D T++ + EAGL+ +A + E+ + Y LI YG+ G EV
Sbjct: 100 GCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGKAGLFREV 159
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVL-VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
R+ ++ +++ +I+V +N K +P E+ ++ D+ N +I
Sbjct: 160 ERVLSTMEANNVAPDTVTWNTLIRVFGLNCK-IPEMEQAYEGLLRQGLQPDMVTLNSLIS 218
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
AY G E E + + +R T+ I + Y R G
Sbjct: 219 AYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAG 259
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
NSL++ Y G EK+ ++ Q M+ + TYN+ M A + E + MK
Sbjct: 213 LNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMK 272
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ V + +TF ++ S Y G + E+ +++ +A D + Y I + + N
Sbjct: 273 AEF-VKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAA-DTAVYNAAIDAFQRAQNF 330
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
++ +I+ ++L +++Y +I ++ + A +EW
Sbjct: 331 EDMEKIFEEMKLKGHAPDDVTYSILIGAYERIRRVDKARDLQEEW 375
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK E++ + M+ N + + +N +M Y + G +++ + MKA + P+S T+
Sbjct: 227 EKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNSSTFCSM 286
Query: 63 MRALAAVNDISGAERVIEEMKRDGRV--AADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A G +E++ R R AAD ++ + A FE E+ +E++
Sbjct: 287 LSAYGR----HGYWHNVEKVMRQARYFDAADTAVYNAAIDAFQRAQNFEDMEKIFEEMKL 342
Query: 121 RNAHRDLSAYQFLITLY 137
+ D Y LI Y
Sbjct: 343 KGHAPDDVTYSILIGAY 359
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 36/286 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA ++E MK S + +N+++ Y K G K A+++EM A I P+ T+N+
Sbjct: 246 QKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNIL 305
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
+ +++ A++V EEM+R G +
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
+ T++ L + + + + ++A L ++ R ++ + LI YG+ G + + +
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF- 424
Query: 149 IWRSLRLAFPNTANISYLNMIQV-LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
+ RS+ L N+S N + V ++ A K KE E D+ N+++ A
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
K+G A L + G +P+ T+ D Y R G+ A++
Sbjct: 485 CKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALN 530
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 7/274 (2%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
S++ N ++ K G + ++ +EM I + T++V + L V A V
Sbjct: 192 LSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV 251
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+E+MK G + T++ + Y +AG KA+ LKE+ + H + + LI +
Sbjct: 252 VEDMKAWG-FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFC 310
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+ N++ +++ ++ ++Y ++I L + L A + ++
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
N +I + K+ L+ A E+ + +RG PN T+ D Y + G M A
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+DTG P+ T + F +E +V A
Sbjct: 431 LDTG------VCPNVSTYNCLIVGFCREGNVKEA 458
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 102/247 (41%), Gaps = 1/247 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
E++ ++M +G + + F+ ++ K G +K ++++MKA P TYN +
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A+ +++EM R+ + TF+ L + A++ +E++ +
Sbjct: 273 GYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y LI G L E + + ++Y +I K L A +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ ++ N +I AY K GR+++A L+ G PN T+ + R
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451
Query: 245 NGDMKLA 251
G++K A
Sbjct: 452 EGNVKEA 458
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 102/244 (41%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L +KM + L + + +N+L+ + K ++ ++ ++ + P+ T+N
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + A ++ M D V + +T++ L + G ++A + KE+E
Sbjct: 411 IDAYGKAGRMDDA-FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL Y L+ + G + R+ + N ++++Y +I + A
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
E +I NV+I + +G+LE A L +G PN T++I D
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEM 589
Query: 243 LRNG 246
+ G
Sbjct: 590 MEKG 593
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ LM + K E + +++EM+A + P+ Y+Y + +R L A R++ +M+
Sbjct: 323 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 382
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T + L + +AG A+ +++ + D Y L+ +G G+
Sbjct: 383 NEG-CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 441
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
V IW +++ N ++Y +I L + + A + F E + + N +
Sbjct: 442 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 501
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
I + K R +A EL + G PN T +F +YY ++G+
Sbjct: 502 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 545
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 108/292 (36%), Gaps = 7/292 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE L +MKEL G +N L+ K+ E++ + +EM TYN
Sbjct: 895 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYN 954
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A + + G + T+ L ++AG E AE E+
Sbjct: 955 TIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 1013
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + Y L+ + GN +V +++ + N SY +I L L
Sbjct: 1014 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 1073
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F++ D+ N++I K RLE A L +++G PN T+
Sbjct: 1074 GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1133
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+ + G A E+ + G W P+ T +R + D A
Sbjct: 1134 HLGKAGKAAEAGKMYEELLTKG------WKPNVFTYNALIRGYSVSGSTDSA 1179
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 39/238 (16%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
G++ + F + Y K+G K + MK+ I+PD N + LA + A+R
Sbjct: 530 GYTHVLF---INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 586
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V E+K G V+ D T++ + +A F++A + ++ N D+ A LI
Sbjct: 587 VFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 645
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
+ G E +RI+ L+ +NL+ G TY
Sbjct: 646 YKAGRGDEAWRIFYQLK-----------------EMNLEPTDG-------------TY-- 673
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
N ++ +EG+++ L E PN T+ D +NG + A+D L
Sbjct: 674 ---NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 728
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 3/214 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA E MK + + N+++ AK+G + E+KA + PD+ TY + +
Sbjct: 548 KAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMI 607
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + + A ++ +M + V D ++L +AG ++A R +L+ N
Sbjct: 608 KCCSKASKFDEAVKIFYDMIENNCV-PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNL 666
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA-E 182
Y L+ G+ G + EV + + + I+Y ++ L + A +
Sbjct: 667 EPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALD 726
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
+ GC D+ N +I KE R A
Sbjct: 727 MLYSMTTKGCIP-DLSSYNTVIYGLVKEERYNEA 759
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 92/234 (39%), Gaps = 3/234 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LLE+M N + + +N+++ K G ++ M +PD +YN + L
Sbjct: 692 LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 751
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE-LENRNAHRD 126
+ A + +MK+ + D+ T + +V+ GL ++A +K+ + D
Sbjct: 752 KEERYNEAFSIFCQMKK--VLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTD 809
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
S+ L+ + + + + + + +I+ L K A + K
Sbjct: 810 RSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVK 869
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+++S + + N +I E ++ AE L + G P+ T+ + D
Sbjct: 870 KFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 923
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 84/223 (37%), Gaps = 1/223 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N ++ L G + + M+ + + T+ L + A + MK
Sbjct: 219 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 278
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V +T ++ L V++G +A + + + Y L+ +G+ ++
Sbjct: 279 AGIVLNAYT-YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVE 337
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
V + R + SY I+VL K A + + E+ D+ V+I
Sbjct: 338 TVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLI 397
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
GR+ +A+++ + ++ P+ T+ D + NGD
Sbjct: 398 QVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 440
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 9/292 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +M YA+ ++ M+ + P+ +N + AL ++ A+ V E M+
Sbjct: 135 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 194
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R D T+S L + + KA +E+ + H D+ Y ++ + + G +
Sbjct: 195 --DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 252
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E I RS+ + Y ++ L A F E E D+ V N +
Sbjct: 253 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 312
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
IGA+ K R++N + + + +G PN+K+ I + + G+ A D K I
Sbjct: 313 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE 372
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
P ++T ++ F ++K+++ A+ + ++K + F LI
Sbjct: 373 -------PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 417
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA + +M + + ++ ++ + K G ++ I++ M S P ++ Y+V +
Sbjct: 219 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 278
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
N + A EM+R G + AD F++L + +A + R LKE++++
Sbjct: 279 HTYGTENRLEEAVDTFLEMERSG-MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 337
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + ++ + G E + ++R + ++ P+ +Y +I++ K++ A+
Sbjct: 338 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDAD--TYTMVIKMFCEKKEMETAD 395
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
K +K + +V+I +E + A L E G P+ T+
Sbjct: 396 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 448
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A + L+KM++ + + +++L+ L K K +I +K S I PD YN
Sbjct: 205 MFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYN 264
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A ++ EM R G V D ++S L S+YVE G + +A E+
Sbjct: 265 SMINVFGKAKLFREARLLLPEM-RAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNE 323
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ E R++ S+R +SY +++V +
Sbjct: 324 VRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGE 383
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N MI Y K E A L + + RG +PNA T+
Sbjct: 384 AIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIIS 443
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 444 IWDKAGKLDRAAMLFQKLRSSG 465
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 118/242 (48%), Gaps = 22/242 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +++ ++++++++ K G ++ + Q++++S I D Y
Sbjct: 417 EKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTM 476
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + + T + LA AG E+A ++ +
Sbjct: 477 IVAYERAGLVAHAKRLLHELKRPDNIPRE-TAITILAG----AGRIEEATWVFRQAFDAG 531
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVN----LK 176
+D++ + +I L+ + + V ++ +R A FP++ N+I +++N L+
Sbjct: 532 EVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDS------NVIALVLNACGKLR 585
Query: 177 DLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ A+ +KE E GC D V M+ Y G + + L ER +DPN
Sbjct: 586 EFEKADAIYKEMEEEGCVFSD-EVHFQMLSLYGARGDFQMVDSLFERL---DSDPNINKK 641
Query: 236 EI 237
E+
Sbjct: 642 EL 643
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 126/308 (40%), Gaps = 19/308 (6%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ +EM+ ++ PD YTY+ + A +++M++D RV+ D +SNL +
Sbjct: 176 GLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWLQKMEQD-RVSGDLVLYSNLIEL 234
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + KA L+ DL AY +I ++G+ E + +R
Sbjct: 235 SRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPD 294
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+SY ++ + V A F E D+ NVMI Y + + A+ L
Sbjct: 295 TVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFW 354
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRTFM 280
R+ G +P ++ Y G+ +L + + R D + V + T I+ +
Sbjct: 355 SMRKMGIEPGIVSYNTLLRVY---GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411
Query: 281 RHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAAAGRT--SPVMLRRLKM 334
+ E EK + L + + + G+E + +I + AG+ + ++ ++L+
Sbjct: 412 KSLEHEKATN--------LVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRS 463
Query: 335 EKVEVSEA 342
+E+ +
Sbjct: 464 SGIEIDQV 471
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 125/319 (39%), Gaps = 11/319 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ +M E+ N ++ +Y + ++ + M+ I P +YN +
Sbjct: 313 EALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLL 372
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R A + M+R + + T++ + IY ++ EKA ++E++NR
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKD-IEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGI 431
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y +I+++ + G L +++ LR + + Y MI + A++
Sbjct: 432 EPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKR 491
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E + ++ GA GR+E A + +A G + + D +
Sbjct: 492 LLHELKRPDNIPRETAITILAGA----GRIEEATWVFRQAFDAGEVKDITVFGCMIDLFS 547
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
RN ++ +K RG G + P S I + + ++ + A+ + +++
Sbjct: 548 RNRKHTNVIEVFDKM----RGAG--YFPDSNVIALVLNACGKLREFEKADAIYKEMEEEG 601
Query: 304 DDLGVEVFEPLIRTYAAAG 322
EV ++ Y A G
Sbjct: 602 CVFSDEVHFQMLSLYGARG 620
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A + L+KM++ + + +++L+ L + K +I +K S I PD YN
Sbjct: 205 MFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYN 264
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I+EM G V + ++S L S+YVE F +A E++
Sbjct: 265 SMINVYGKAKLFREARLLIKEMNEAG-VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 323
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N DL+ +I +YGQ + E R++ SLR +SY +++V +
Sbjct: 324 VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGE 383
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N MI Y K E A L + + RG +PNA T+
Sbjct: 384 AIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 443
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 444 IWGKAGKLDRAATLFQKLRSSG 465
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 130/306 (42%), Gaps = 15/306 (4%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + + A +++M++D RV+ D +SNL +
Sbjct: 176 GLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD-RVSGDLVLYSNLIEL 234
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 159
+ KA L+ DL AY +I +YG+ E + + + A PN
Sbjct: 235 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 294
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
T +SY ++ V V A F E + D+ N+MI Y + ++ A+ L
Sbjct: 295 T--VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRL 352
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRT 278
R+ +PN ++ Y G+ +L + + R D + V + T I+
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVY---GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKI 409
Query: 279 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEK 336
+ + E EK + + E+ + ++ + + +I + AG+ + + ++L+
Sbjct: 410 YGKTMEHEKATNLVQ---EMQSRGIEPNAI-TYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 337 VEVSEA 342
VE+ +
Sbjct: 466 VEIDQV 471
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 417 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 476
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A V + A+R++ E+K + + +I +AG E+A ++
Sbjct: 477 IVAYERVGLMGHAKRLLHELKLPDNIPRE-----TAITILAKAGRTEEATWVFRQAFESG 531
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNL----K 176
+D+S + +I LY + V ++ +R A FP++ N+I +++N +
Sbjct: 532 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDS------NVIAMVLNAYGKQR 585
Query: 177 DLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ A+ ++E E GC D V M+ Y+ + E E L +R +DPN +
Sbjct: 586 EFEKADTVYREMQEEGCVFPD-EVHFQMLSLYSSKKDFEMVESLFQRLE---SDPNVNSK 641
Query: 236 EI 237
E+
Sbjct: 642 EL 643
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F ++ LY++ + + ++M+ + PDS + + A + A+ V EM+
Sbjct: 539 FGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQ 598
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G V D F L S+Y FE E + LE+ + + LY + L
Sbjct: 599 EEGCVFPDEVHFQML-SLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKL 657
Query: 144 SEVYRIWRSLR 154
++ R+ +R
Sbjct: 658 NDASRVMNRMR 668
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 1/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ LM + K E + +++EM+A + P+ Y+Y + +R L A R++ +M+
Sbjct: 198 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKME 257
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T + L + +AG A+ +++ + D Y L+ +G G+
Sbjct: 258 NEG-CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDS 316
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
V IW +++ N ++Y +I L + + A + F E + + N +
Sbjct: 317 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 376
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
I + K R +A EL + G PN T +F +YY ++G+
Sbjct: 377 ISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 420
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 108/292 (36%), Gaps = 7/292 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE L +MKEL G +N L+ K+ E++ + +EM TYN
Sbjct: 770 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYN 829
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A + + G + T+ L ++AG E AE E+
Sbjct: 830 TIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 888
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + Y L+ + GN +V +++ + N SY +I L L
Sbjct: 889 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 948
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F++ D+ N++I K RLE A L +++G PN T+
Sbjct: 949 GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1008
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+ + G A E+ + G W P+ T +R + D A
Sbjct: 1009 HLGKAGKAAEAGKMYEELLTKG------WKPNVFTYNALIRGYSVSGSTDSA 1054
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 39/238 (16%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
G++ + F + Y K+G K + MK+ I+PD N + LA + A+R
Sbjct: 405 GYTHVLF---INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 461
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V E+K G V+ D T++ + +A F++A + ++ N D+ A LI
Sbjct: 462 VFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTL 520
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
+ G E +RI+ L+ +NL+ G TY
Sbjct: 521 YKAGRGDEAWRIFYQLK-----------------EMNLEPTDG-------------TY-- 548
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
N ++ +EG+++ L E PN T+ D +NG + A+D L
Sbjct: 549 ---NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 603
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 106/289 (36%), Gaps = 38/289 (13%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + KMK+ + + + +L+ + G + + I MKA + Y +
Sbjct: 284 AKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVID 343
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
AL V + A + +EMK+ G V + ++++L S +++A F A K ++
Sbjct: 344 ALCQVGRVFEALEMFDEMKQKGIVPEQY-SYNSLISGFLKADRFGDALELFKHMDIHGPK 402
Query: 125 RDLSAYQFLITLYG-----------------------------------QTGNLSEVYRI 149
+ + I YG ++G L R+
Sbjct: 403 PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRV 462
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYA 208
+ L+ + I+Y MI+ A K F + E+ C D+ N +I
Sbjct: 463 FHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVP-DVLAVNSLIDTLY 521
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
K GR + A + + + +P T+ R G +K + LE+
Sbjct: 522 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 570
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 3/193 (1%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+++ AK+G + E+KA + PD+ TY + ++ + + A ++ +M
Sbjct: 444 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 503
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
+ V D ++L +AG ++A R +L+ N Y L+ G+ G +
Sbjct: 504 NNCV-PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVK 562
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVM 203
EV + + + I+Y ++ L + A + + GC D+ N +
Sbjct: 563 EVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTV 621
Query: 204 IGAYAKEGRLENA 216
I KE R A
Sbjct: 622 IYGLVKEERYNEA 634
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 92/234 (39%), Gaps = 3/234 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LLE+M N + + +N+++ K G ++ M +PD +YN + L
Sbjct: 567 LLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLV 626
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE-LENRNAHRD 126
+ A + +MK+ + D+ T + +V+ GL ++A +K+ + D
Sbjct: 627 KEERYNEAFSIFCQMKK--VLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTD 684
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
S+ L+ + + + + + + +I+ L K A + K
Sbjct: 685 RSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVK 744
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+++S + + N +I E ++ AE L + G P+ T+ + D
Sbjct: 745 KFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLD 798
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 84/223 (37%), Gaps = 1/223 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N ++ L G + + M+ + + T+ L + A + MK
Sbjct: 94 NYMLELMRGHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 153
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V +T ++ L V++G +A + + + Y L+ +G+ ++
Sbjct: 154 AGIVLNAYT-YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVE 212
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
V + R + SY I+VL K A + + E+ D+ V+I
Sbjct: 213 TVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLI 272
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
GR+ +A+++ + ++ P+ T+ D + NGD
Sbjct: 273 QVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGD 315
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + +M++ + +++ F +L+ + K G+ + Q+M+ +MPD YN
Sbjct: 272 ENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNAL 331
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L ++ AE ++EEMK G + D T++ L + G + A +++ +
Sbjct: 332 VNGLCRARNLKAAESIVEEMKNAG-LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKE 390
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + G + R+ R + A N +Y +I D+
Sbjct: 391 VSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGF 450
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K KE ++ + NV++ K G+++NA+ L G P+ T+ I D
Sbjct: 451 KLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQ 510
Query: 243 LRNG 246
++G
Sbjct: 511 CKHG 514
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 17/258 (6%)
Query: 37 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 96
PE +Q + A + P++ +NV MR + ++ A +V +EM+R V TF+
Sbjct: 168 PEAYTFYLQLLDAG-MAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS--VQPTVVTFN 224
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
L S A + + KE+ + D+ Y LI + +TG + +++ +R
Sbjct: 225 TLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDT 284
Query: 157 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
N + + +I ++ +++ D+ N ++ + L+ A
Sbjct: 285 GVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAA 344
Query: 217 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK--------------AIDTG 262
E + E + G P+ T+ D ++G + +A+D +K A+ +G
Sbjct: 345 ESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISG 404
Query: 263 RGDGGKWVPSSETIRTFM 280
G+ V + +R M
Sbjct: 405 LSKAGRPVDAERVLREMM 422
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 95/243 (39%), Gaps = 1/243 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+L++ + + + + +EM + PD YTY ++ + A ++ EM
Sbjct: 223 FNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEM- 281
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
RD V + F+ L + + G +++ R DL AY L+ + NL
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNL 341
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
I ++ A ++Y +I L A ++ + D +
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I +K GR +AE + +P+ T+ + D + R GD+K L++ + G+
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK 461
Query: 264 GDG 266
G
Sbjct: 462 KPG 464
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 108/260 (41%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ + L ++M ++ + + +L+ + +TG E + EM+ + + P++ +
Sbjct: 237 DAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTL 296
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +++ + ++M+ G V D ++ L + A + AE ++E++N
Sbjct: 297 IDAHCKEGNVNAGMDLYQDMRVRG-VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI + G L I + + + ++Y +I L AE
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +E D ++I A+ ++G ++ +L + + +G P T+ + +
Sbjct: 416 RVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G MK A L ++ G
Sbjct: 476 CKLGQMKNADMLLHAMLNIG 495
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 85/211 (40%), Gaps = 7/211 (3%)
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
+ L+ + + G L +++ +R + T +++ +I + +DL + +KE
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEMRRSVQPTV-VTFNTLISGMCRARDLDAVDGLYKEMS 247
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
D+ +I + + GR+ENA ++ R G +PNA + D + + G++
Sbjct: 248 DVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVN 307
Query: 250 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 309
+D + G +P + + +++ AE +E +K A
Sbjct: 308 AGMDLYQDMRVRG------VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKV 361
Query: 310 VFEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 340
+ LI G+ M + KM + EVS
Sbjct: 362 TYTTLIDGCCKDGKLDMAMDIKQKMAEKEVS 392
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 141/337 (41%), Gaps = 16/337 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE L KMKEL S N L+ LY+ +KI ++ M+ +I P TY +
Sbjct: 255 KAEDLFNKMKELKFPTSVFACNQLLLLYSMHDR-KKISDVLLLMERENIKPSRGTYQFLI 313
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ DI+G E+++E MK +G + D + LA Y+ AGL E+A+ +KE+E +
Sbjct: 314 NSKGLAGDITGMEKIVETMKEEG-IEVDPELQATLAKYYIRAGLKERAQDLMKEIEGKGL 372
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV---NLKDLPG 180
+ + L+ LY G+ V RL+ N+ Y N I + LK++
Sbjct: 373 QQTPWVCRSLLPLYADIGDSDNVR------RLSTFVDQNLRYDNCISAIRAWGKLKEVEE 426
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE F+ + + ++ Y + L ++L +R G TW
Sbjct: 427 AEAVFERLVEKYKIFPMLPYFALMEIYTENKMLAKGKDLVKRMGNAGVTIGPSTWHALVK 486
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y++ G++ A L +A K P + + + + DV E +K
Sbjct: 487 LYIKAGEVGKAELILNRATKD-----NKMRPMFISYMAILEEYAKRGDVHNTEKVFMKMK 541
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+A + +E ++ Y A + M R+K + V
Sbjct: 542 RASYAAQLMQYETVLLAYIKAKTPAYGMFERMKADNV 578
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 9/292 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +M YA+ ++ M+ + P+ +N + AL ++ A+ V E M+
Sbjct: 171 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 230
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R D T+S L + + KA +E+ + H D+ Y ++ + + G +
Sbjct: 231 --DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E I RS+ + Y ++ L A F E E D+ V N +
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
IGA+ K R++N + + + +G PN+K+ I + + G+ A D K I
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE 408
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
P ++T ++ F ++K+++ A+ + ++K + F LI
Sbjct: 409 -------PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 453
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 101/233 (43%), Gaps = 4/233 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA + +M + + ++ ++ + K G ++ I++ M S P ++ Y+V +
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
N + A EM+R G + AD F++L + +A + R LKE++++
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSG-MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + ++ + G E + ++R + ++ P+ +Y +I++ K++ A+
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDAD--TYTMVIKMFCEKKEMETAD 431
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
K +K + +V+I +E + A L E G P+ T+
Sbjct: 432 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 6/267 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KA+ + E M + + + FN+++ K G E++ I EMK +I TYN
Sbjct: 254 MMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYN 313
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + + A R +M+R G ++ F+ L Y + GLF++A E+ N
Sbjct: 314 ILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS-FNPLIEGYCKQGLFDEAWGVTDEMLN 372
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ S Y I + G + + + S+ A P+ +SY ++ + ++
Sbjct: 373 AGIYPTTSTYNIYIRALCEFGRIDDARELLSSM--AAPDV--VSYNTLMHGYIKMRKFVE 428
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F + ++G I N +I + G LE A+ LKE + P+ T+
Sbjct: 429 ASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLK 488
Query: 241 YYLRNGDMKLAVDCLEKAIDTG-RGDG 266
+++NG++ +A + ++ + G + DG
Sbjct: 489 GFVKNGNLSMATEIYDEMLRKGIKPDG 515
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 107/293 (36%), Gaps = 20/293 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A+ L E+M + + + +L+ + K G+ I EM I PD Y Y
Sbjct: 462 EGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTR 521
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D A R+ EEM + A D T ++ + G EKA +++
Sbjct: 522 TVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVG 581
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y +I Y + G ++ + + + I+Y +I L A
Sbjct: 582 LVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAF 641
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E + ++ N ++ K G ++ A + G PN ++ I
Sbjct: 642 QYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILIS-- 699
Query: 243 LRNGDM-------KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
++ D+ KL + L+K I+ P T R +H E++ +
Sbjct: 700 -KHCDLDKWEEVVKLYKEMLDKEIE----------PDGYTHRALFKHLEKDHE 741
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A LL +M++ N+ + ++S++ K PE+ +++EM A+ PD + +N
Sbjct: 97 TEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNG 156
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M+ A N++ A V + M G D ++ L + G +++ + L E+ R
Sbjct: 157 VMQGFARSNNMEKAREVYQHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMR 215
Query: 122 NAHRDLSAYQFLITLYG--QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
A + F ++G +TG L + ++ S+ A +Y +I L + +
Sbjct: 216 AAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVI 275
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERARRRGADPNAKTWEIF 238
A + F++ C D N +I Y K G ++ AE+L +E + G P T+
Sbjct: 276 QARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 335
Query: 239 SDYYLRNGDM 248
D + + G +
Sbjct: 336 IDGFCKLGKL 345
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 10/294 (3%)
Query: 32 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 91
AK G + + + MK+ S +P TYNV + + + A + + MKR+ RV D
Sbjct: 21 AKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPD 80
Query: 92 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
T++ L S +G E A + L E+ ++N ++ Y +I + E Y++
Sbjct: 81 RWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLE 140
Query: 152 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKE 210
+ A N ++ ++Q ++ A + ++ ESG ++ +++I AK
Sbjct: 141 EMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY-HILIHGLAKI 199
Query: 211 GRL-ENAEELKERARR-RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
G+L E+ + L E A R G PN T+ R G+++ A++ ++ G
Sbjct: 200 GKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------ 253
Query: 269 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P+ T T + + + V A E + +A + LI Y G
Sbjct: 254 CKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRG 307
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 88/233 (37%), Gaps = 38/233 (16%)
Query: 29 TLYAKTGHPEKIPA---IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
TL A EK+ + ++M + I PD+ YN + + AE++ EM
Sbjct: 263 TLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 322
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
+ TF+ L + + G +A + E+ + D Y+ LI + L E
Sbjct: 323 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDE 382
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+++ +R EK F C ++ +G
Sbjct: 383 ALEVYKQMR---------------------------EKKFLLDPVSCVSF--------VG 407
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
K G ++ A + E R+ GA PN +T+ I S+ ++ G ++ A +E A
Sbjct: 408 GLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 460
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 9/230 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L++ +G+ E ++ EM+ +I + +TY+ +++L + +V+EEM
Sbjct: 84 YNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMM 143
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G D F+ + + + EKA + + D +Y LI + G L
Sbjct: 144 AAG-CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKL 202
Query: 144 SEVYRIWR--SLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIR 198
E +I ++R A PN I++ +I L +L A + F E+GC
Sbjct: 203 DESLKILSEMAMRAAGYVPNV--ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 260
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
T ++ G E ++ A EL E+ + P+A + Y + G M
Sbjct: 261 YTTLIAGLCRAE-KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSM 309
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 1/234 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++LM K E + +++EM+ + P+ YT+ + +R L I A + M
Sbjct: 230 YSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD 289
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T++ L AG E A+ +++ D Y L+ + G+L
Sbjct: 290 DEG-CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL 348
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
W + +++ ++ VL +D A F ++ N +
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
I + GR+E+A +L G P A T+ IF DY+ ++G+ AV+ EK
Sbjct: 409 ICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEK 462
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 9/238 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKA L + MK + + FN L+ ++ K+G ++ + +EM + PD+ TYN+
Sbjct: 804 TEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNI 863
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADW----TTFSNLASIYVEAGLFEKAERALKE 117
+ +LA N++ A ++ V++D+ T+ L + G E+A R +E
Sbjct: 864 VISSLAKSNNLDKALDFFYDL-----VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ + + + + LI YG+ G+ ++++ + SY ++ L
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ A F E +S D N +I K R+E A L R RG P+ T+
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 121/303 (39%), Gaps = 11/303 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A A + M++ + + +N+L+ + G E ++ M++ + P +YTYN++
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A E+MK G V ++L S+ E G +A+ L
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL-AEMGRLREAKTMFNGLRENG 502
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y ++ Y + G + E + + I ++I L + A
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F + + + N ++ KEGR++ A EL E + PN ++ D +
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 243 LRNGDMKLAVDCLEK--AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+N +++LA+ K +D P T T + +E V+ A F LK
Sbjct: 623 CKNDEVELALKMFSKMTVMDCK--------PDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Query: 301 KAV 303
K++
Sbjct: 675 KSM 677
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 75 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
A ++ ++ + ++ +++ L +E EKA K+++N D + L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 135 TLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
++G++G ++E++ +++ + R P+ I+Y +I L +L A F + S
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDA--ITYNIVISSLAKSNNLDKALDFFYDLVSSD 888
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
R +I AK GRLE A L E G PN + I + Y + GD + A
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 253 DCLEKAIDTG 262
++ ++ G
Sbjct: 949 QLFKRMVNEG 958
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 48 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 107
K I P +YN + L V+ A + ++MK G A D TF+ L +++ ++G
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGK 838
Query: 108 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 167
+ KE+ +R D Y +I+ ++ NL + + L + +Y
Sbjct: 839 ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898
Query: 168 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 226
+I L + L A + F+E + GC + + N++I Y K G E A +L +R
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKP-NCAIFNILINGYGKIGDTETACQLFKRMVNE 957
Query: 227 GADPNAKTWEIFSD 240
G P+ K++ I D
Sbjct: 958 GIRPDLKSYTILVD 971
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KA EKMK + + + N+ + A+ G + + ++ + + PDS TYN+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M+ + V + A ++ EM R+G D ++L +AG ++A + +++
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNG-CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+ Y L++ G+ G + + ++ S+ + PNT IS+ ++ ++
Sbjct: 572 KLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNT--ISFNTLLDCFCKNDEVE 629
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
A K F + D+ N +I KE ++ +A
Sbjct: 630 LALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A L ++M + + L+ G ++ E+K++ + PD YN
Sbjct: 944 TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + A + EM+ G + D T+++L AG+ E+A+R +EL+
Sbjct: 1004 IINGLGKSQRMEEALALYNEMRNRG-IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D+ Y LI Y + N Y +++++
Sbjct: 1063 GLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 119/303 (39%), Gaps = 11/303 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ +MK + + + +L+ +A+ G EK + +EM+ + PD Y YN M A +
Sbjct: 299 VFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYS 358
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
GA + M+ G D +++ L + AGL ++AE A +EL+ + +
Sbjct: 359 RAGLPQGASEIFSLMEHMG-CEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTM 417
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
++ L++ + ++GN++ + L + + M+ L E+ F
Sbjct: 418 KSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAA 477
Query: 188 WESG----CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E G D NV++ AY + G L+ E RG + TW Y
Sbjct: 478 MERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYA 537
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
R + + E+ +D G P + T + + E+ V+ + + K
Sbjct: 538 RKKEYGQCLRVFEEMVDAG------CYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKDA 591
Query: 304 DDL 306
L
Sbjct: 592 KTL 594
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 5/249 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+EKA + ++MK+ ++ + ++ +Y K P + +EMK+ P+ TY
Sbjct: 258 SEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTA 317
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A AE V EEM++ G D ++ L Y AGL + A +E+
Sbjct: 318 LVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 376
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D ++Y L+ +G+ G E ++ L+ S++ ++ ++
Sbjct: 377 GCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARC 436
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERARRRGAD---PNAKTWEI 237
E+ + D N M+ AY + GRL++ E L R GA P+ T+ +
Sbjct: 437 EEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNV 496
Query: 238 FSDYYLRNG 246
+ Y R G
Sbjct: 497 LVNAYGRAG 505
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 5/242 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE + E+M++ +N+LM Y++ G P+ I M+ PD +YN
Sbjct: 327 LCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYN 386
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A AE +E+K+ G + + L S + +G + E + +L
Sbjct: 387 ILVDAFGRAGLHQEAEAAFQELKQQG-MRPTMKSHMLLLSAHARSGNVARCEEVMAQLHK 445
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D A ++ YG+ G L ++ R++ ++ +A + VLVN G
Sbjct: 446 SGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAG 505
Query: 181 ----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
E F+ + D+ IGAYA++ + E G P+A T +
Sbjct: 506 YLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAK 565
Query: 237 IF 238
+
Sbjct: 566 VL 567
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 92/223 (41%), Gaps = 1/223 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ Y + + A + + +P TY + +RA + AE VI EM+
Sbjct: 175 YNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQ 234
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R+G + T ++ ++A EKA + ++ + Y +I +YG+
Sbjct: 235 RNG-IPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQP 293
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
R++R ++ +Y ++ AE+ F+E + D+ N +
Sbjct: 294 MSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNAL 353
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ AY++ G + A E+ G +P+ ++ I D + R G
Sbjct: 354 MEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAG 396
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 98/223 (43%), Gaps = 3/223 (1%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+ Y +G + +I EM+ + I P + YN ++ L A V + MK++
Sbjct: 213 LLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKE- 271
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
R + T+ + ++Y +A + R +E+++ ++ Y L+ + + G +
Sbjct: 272 RCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKA 331
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAEKCFKEWESGCATYDIRVTNVMIG 205
++ ++ A + ++ N + + LP GA + F E D N+++
Sbjct: 332 EEVFEEMQQA-GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVD 390
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
A+ + G + AE + +++G P K+ + + R+G++
Sbjct: 391 AFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNV 433
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 108/256 (42%), Gaps = 5/256 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K EAL +MK N+ + +++ Y + G+ + ++ E + + P+ TY V +
Sbjct: 265 KVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLI 324
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AE ++ +M+ G V + F+ + Y G+ + A + +E
Sbjct: 325 NGFCKIGQMEAAEMLLADMQGQG-VGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGV 383
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y L + L E + + PN ++Y +I + D+ A
Sbjct: 384 ELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNY--VTYTTLISIHCKDGDMVEA 441
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F+E AT + NVMI Y K+G + AE ++ ++G P+ T+
Sbjct: 442 RRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHG 501
Query: 242 YLRNGDMKLAVDCLEK 257
+ NG + +A+ E+
Sbjct: 502 HCVNGKVDVALKLFEE 517
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 5/235 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LL M+ +G + + FN+++ Y + G + I M+ + D YTYN
Sbjct: 334 EAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTL 393
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L VN + A+ ++ M G V ++ T++ L SI+ + G +A R +E+ +
Sbjct: 394 ACGLCRVNRLDEAKTLLHIMIEMG-VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 452
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
A + Y +I Y + G++ E R + + + P+ +Y +++ +
Sbjct: 453 ATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDV--YTYASLVHGHCVNGKVDV 510
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A K F+E + ++ +I AKEGR E A +L + + G P+ +
Sbjct: 511 ALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLY 565
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 123/319 (38%), Gaps = 14/319 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A LL+ M + +++ +NSL+ Y + ++ I++ M+ I TY +
Sbjct: 193 VDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTI 252
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L+ DIS E + EMK + V D ++ + + Y AG +A + L E
Sbjct: 253 LVDSLSTARDISKVEALFNEMKAN-NVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGN 311
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y LI + + G + + ++ I + MI + A
Sbjct: 312 GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDA 371
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K E DI N + + RL+ A+ L G PN T+
Sbjct: 372 LKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISI 431
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ ++GDM A + + G PS T + + ++ + AE F + ++K
Sbjct: 432 HCKDGDMVEARRLFREMAEKG------ATPSVVTYNVMIDGYTKKGSIREAERFRKEMEK 485
Query: 302 AVDDLGVEVFEPLIRTYAA 320
+ F P + TYA+
Sbjct: 486 -------KGFVPDVYTYAS 497
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 114/306 (37%), Gaps = 9/306 (2%)
Query: 32 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 91
K+G + ++ +M + ++ YN + D + ++E M+ +G + A
Sbjct: 188 CKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG-IEAT 246
Query: 92 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
T++ L A K E E++ N D+ Y +I Y + GN+ ++
Sbjct: 247 VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLD 306
Query: 152 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
+Y +I + + AE + + + + N MI Y ++G
Sbjct: 307 ECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKG 366
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 271
+++A ++K + G + + T+ + R + A L I+ G VP
Sbjct: 367 MVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG------VVP 420
Query: 272 SSETIRTFMR-HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLR 330
+ T T + H + V+ F E+ +K V + +I Y G
Sbjct: 421 NYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP-SVVTYNVMIDGYTKKGSIREAERF 479
Query: 331 RLKMEK 336
R +MEK
Sbjct: 480 RKEMEK 485
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Query: 99 ASIYVE----AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
AS+ V+ +G + A R L ++ + Y L+ Y + + V I +
Sbjct: 180 ASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIME 239
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 214
+Y ++ L +D+ E F E ++ D+ + +I AY + G +
Sbjct: 240 NEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMR 299
Query: 215 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
A ++ + G +PN +T+ + + + + G M+ A
Sbjct: 300 RAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAA 336
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 6/231 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ G E+ ++ +M+ + P++ TYN + A ++ GAERV+ M+
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 214
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + TF+++ + +AG E A + E+ D+ +Y L++ Y + G L
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 274
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVT 200
E ++ + R P+ +++ ++I +L A + E G ++ T
Sbjct: 275 HESLAVFSEMTQRGLVPDV--VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 332
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
+I + K+G L++A E R+ G P+ + + Y + G M LA
Sbjct: 333 -ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FNS++ K G E + EM + PD +YN + V + + V EM
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G V D TF++L +AG E+A + ++ R + + LI + + G L
Sbjct: 286 QRGLVP-DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ +R + + Y +I L + A + +E E+ D+ + +
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTW 235
I Y K G L++A +L ++ ++G P+A T+
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 105/234 (44%), Gaps = 5/234 (2%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A+ +M + L + F SL+ K G+ E+ A++ +M+ + + T+ +
Sbjct: 279 AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGF 338
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A +EEM++ G + ++ L + Y + G + A ++E+E + D
Sbjct: 339 CKKGFLDDALLAVEEMRKCG-IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y +I+ Y + GNL +++ + + + P+ I+Y ++I+ L K L A +
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA--ITYSSLIRGLCEEKRLNDACEL 455
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
F+ D +I + KEG +E A L + R+G P+ T+ +
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 110/260 (42%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + ++M L + +N+L++ Y K G + A+ EM ++PD T+
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A ++ +M+ G + + TF+ L + + G + A A++E+
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERG-LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI Y + G + + R + ++Y +I + +L A
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ ++ D + +I +E RL +A EL E + G P+ T+ D +
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G+++ A+ ++ I G
Sbjct: 479 CKEGNVEKALSLHDEMIRKG 498
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 110/280 (39%), Gaps = 41/280 (14%)
Query: 44 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 103
+ M + P+ YTYN+ +RAL A + A V+ +M+ G A + T++ L + +
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAG-CAPNAVTYNTLVAAFC 198
Query: 104 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 163
AG + AER +++L + GN A PN +
Sbjct: 199 RAGELDGAER-------------------VVSLMREEGN-------------AKPNL--V 224
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
++ +M+ L + GA K F E D+ N ++ Y K G L + +
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
+RG P+ T+ + G+++ AV + + + G + T + F
Sbjct: 285 TQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG------LRMNEVTFTALIDGF 338
Query: 284 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
++ +D A +E ++K V + LI Y GR
Sbjct: 339 CKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%), Gaps = 18/241 (7%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L E M +L + + +L+ + K G+ EK ++ EM ++PD TY+V + L+
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Query: 68 AVNDISGAERVIEEMKRDGRVA--------------ADWTTFSNLASIYVEAGLFEKAER 113
A R++ ++ + V A++ + L + GL ++A++
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAF-PNTANISYLNMIQV 171
+ + +RN D S Y LI + + GN+ + + LR F PN+ S +++++
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST--STISLVRG 632
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
L + A+ ++ + C D + +I KEG ++ ++ R G P+
Sbjct: 633 LFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692
Query: 232 A 232
+
Sbjct: 693 S 693
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 134/305 (43%), Gaps = 16/305 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE L +M++ + N+ + + + A+ ++++ P+ TYN
Sbjct: 156 EKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRM 215
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + S AE + M+R + TF+ L + + GL+ +AER +L+ +
Sbjct: 216 IVIYGKAGEPSKAEMLYRSMRR-AMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG 180
D AY L+ Y Q G+ + I+++++ FP+T + + +L+N G
Sbjct: 275 YKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHN------ILINAYGRAG 328
Query: 181 ----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
AEK FK +S + +++ +++ AYA+ GR+E AEEL R G P+ +
Sbjct: 329 LYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYN 388
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ Y +G + L K + + + P T T ++ + Q + AE
Sbjct: 389 SLINAYGVSGRHEDMEALLAKMV---KSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELF 445
Query: 297 EILKK 301
+ L +
Sbjct: 446 QGLAR 450
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 4/262 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE L M+ + F +LM +A+ G + +++ PD Y YN M
Sbjct: 227 KAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALM 286
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A + +GA + + M+R+G D + + L + Y AGL+E AE+ K +++
Sbjct: 287 EAYSQGGSPAGALEIFQTMQRNG-CFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGF 345
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY---LNMIQVLVNLKDLPG 180
+L + L++ Y + G + E + ++ + Y +N V +D+
Sbjct: 346 SPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEA 405
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ S DI N +I YA+ G + AEEL + R P+A TW
Sbjct: 406 LLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMG 465
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y + + L+K +++G
Sbjct: 466 GYAKKKLYRKCTSILKKMLESG 487
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 91/250 (36%), Gaps = 42/250 (16%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQE----MKASSIMPDS 56
M E A A+ + L G + +++ M++ + + P + Q ++ ++ PD
Sbjct: 47 MQEDATAIWNALDNLPRGHDT--WDNFMSVVVHFWNYKDWPRVTQMCEWVLQGTTFRPDL 104
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
YN+ + A +I AE+ M+ + + TF L + Y AG FEKAE
Sbjct: 105 GCYNLLIDAYGKSLNIEDAEKTFNRMQ-EALCVPNEETFGVLINGYRLAGSFEKAEELFV 163
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+++ R P N + VL + K
Sbjct: 164 QMQKRGYSPG-------------------------------PLACN----TFLHVLEDAK 188
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ AE F++ E +I N MI Y K G AE L RR PN T+
Sbjct: 189 EYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFT 248
Query: 237 IFSDYYLRNG 246
+ + R G
Sbjct: 249 ALMNAFARQG 258
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 167 NMIQVLV---NLKDLPGAEKCFKEWESGCATY--DIRVTNVMIGAYAKEGRLENAEELKE 221
N + V+V N KD P + EW T+ D+ N++I AY K +E+AE+
Sbjct: 70 NFMSVVVHFWNYKDWPRVTQ-MCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFN 128
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
R + PN +T+ + + Y G + A + + G + P TF+
Sbjct: 129 RMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRG------YSPGPLACNTFLH 182
Query: 282 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
E K+ AE L+K + ++ + +I Y AG S
Sbjct: 183 VLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPS 226
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 5/253 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L ++M + +N+L+ K G + I+ +M A IMP+ +Y+
Sbjct: 356 EAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTV 415
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A + EM R +A D +++ L SIY + G E+A L+E+ +
Sbjct: 416 IDGFAKAGRFDEALNLFGEM-RYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPG 180
+D+ Y L+ YG+ G EV +++ ++ PN ++Y +I
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNL--LTYSTLIDGYSKGGLYKE 532
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F+E++S D+ + + +I A K G + +A L + + G PN T+ D
Sbjct: 533 AMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 241 YYLRNGDMKLAVD 253
+ R+ M+ + D
Sbjct: 593 AFGRSATMERSAD 605
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 109/275 (39%), Gaps = 37/275 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEM 82
F++L++ Y ++G E+ ++ MK + P+ TYN + A + + +EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 83 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 142
+R+ V D TF++L ++ GL+E A E+ NR +D+ +Y L+ + G
Sbjct: 331 QRNC-VQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 143 LSEVYRIWRSL--RLAFPNTAN---------------------------------ISYLN 167
+ + I + + PN + +SY
Sbjct: 390 MDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNT 449
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
++ + + A +E S D+ N ++G Y K+G+ + +++ +R
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREH 509
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
PN T+ D Y + G K A++ + G
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAG 544
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+E+A +L +M + + + +N+L+ Y K G +++ + EMK ++P+ TY+
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYST 519
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A V E K G + AD +S L + GL A + E+
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAG-LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 122 NAHRDLSAYQFLITLYGQTGNL 143
++ Y +I +G++ +
Sbjct: 579 GISPNVVTYNSIIDAFGRSATM 600
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 11/277 (3%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
I E++ SS++PD++ YN+ + L N + A ++++ MK + D T+++L
Sbjct: 690 IFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ-NILPDLFTYTSLLDGL 748
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNT 160
++G E+A ++ D+ AY L+ + G+ G LS I+R++ + P+
Sbjct: 749 GKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDV 808
Query: 161 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 220
++Y ++I L + A F+ S T ++ V + +I ++ K+G ++ A EL
Sbjct: 809 --VTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELF 866
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
E +RR PN T+ + G + +A LE+ G VP T +
Sbjct: 867 EEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG------CVPDLVTYNILI 920
Query: 281 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRT 317
+ VD AE + + +K+ V F LI +
Sbjct: 921 DGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIES 957
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 137/354 (38%), Gaps = 26/354 (7%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ +MK S+ +N ++ L K G + ++ I PD+ T+ +++ +
Sbjct: 239 IFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFN 298
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ A I+EM + G + TF+ L V++G ++A + ++N ++
Sbjct: 299 RSGRLDPAAEPIQEMIKSG-IDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNV 357
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+ + G L E ++ ++ + I+Y +I L + A FKE
Sbjct: 358 VTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKE 417
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ ++R N+MI K GR A +L + +GA P+ T+ D + G
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQ 477
Query: 248 MKLAVDCLEKAI----------DTGRGDGGKWVPSSETI---------------RTFMRH 282
M + +++ + D+ G G + T+ T M
Sbjct: 478 MDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA 537
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
F VD A LE++KK V + L+ AGR + +MEK
Sbjct: 538 FIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 5/236 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A L++ MK N+ + SL+ K+G E+ + +M PD Y
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M L +S A + M + R D T+S+L + G E+A + ++
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKK-RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISK 837
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
++ Y LI +G+ G + ++ + R PN ++Y N++ L L
Sbjct: 838 GCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNI--VTYNNLLSGLAKAGRLN 895
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
AEK +E E D+ N++I K G ++ AE +R + +G P+ T+
Sbjct: 896 VAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITF 951
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 104/248 (41%), Gaps = 14/248 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + +MKE N ++ +N+L+ K G + + +EMK ++P+ TYN+
Sbjct: 374 EEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIM 433
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A ++ ++K G V D T++ L + + G +K +KE+ +
Sbjct: 434 ISVLGKAGRQPEAWQLFHDLKEQGAV-PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Query: 123 AH----RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
RD +A G G + R L F + I+Y ++ ++ +
Sbjct: 493 GECIISRDSNA--------GHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHV 544
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW-EI 237
A K + + + ++ K GRL+ A L ++G +P+ T+ +
Sbjct: 545 DEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSL 604
Query: 238 FSDYYLRN 245
+ +Y R+
Sbjct: 605 MASFYKRD 612
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 118/289 (40%), Gaps = 34/289 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +LL +M++ S + ++SLM + K E+ ++ EM + D TY++
Sbjct: 580 DEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLV 639
Query: 63 MRALAAVNDISGAERVIEEMKRDG----------------------------------RV 88
+ L +D+ A V MK +G +
Sbjct: 640 INCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSL 699
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
D ++ + + V++ ++A + + ++N+N DL Y L+ G++G L E +
Sbjct: 700 VPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFN 759
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
++ + ++Y +++ VL L A F+ D+ + +I +
Sbjct: 760 MFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLG 819
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
KEGR+E A E + +G PN + D + + G + A++ E+
Sbjct: 820 KEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEE 868
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++SL+ + K G ++ + +EM+ P+ TYN + LA ++ AE+++EEM+
Sbjct: 846 YSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEME 905
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G V D T++ L + G+ ++AE K ++ + D+ + LI G+ L
Sbjct: 906 KVGCV-PDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKL 964
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRV 199
E ++ S+ N + ++Y +I +L + A F E + GC I +
Sbjct: 965 LEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITI 1021
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A L E+M+ + + +N+L++ AK G +++EM+ +PD TYN
Sbjct: 858 MVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYN 917
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + + + AE + MK G + D TF++L + +A +E
Sbjct: 918 ILIDGVGKMGMVDEAESYFKRMKEKG-IVPDVITFTSLIESLGKVDKLLEACELFDSMEE 976
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMI 169
+ + Y LI + G+ G + E I+ +++ P+ I + I
Sbjct: 977 EGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRI 1027
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 132/323 (40%), Gaps = 11/323 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A LLE MK+ + + + +L+ K G ++ ++++EM+ P TY+
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M + + + + +EM R G V AD +T+S + + ++ ++A ++
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCV-ADVSTYSLVINCLCKSDDVDQALDVFGRMKEE 662
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L Y+ L++ + + +I+ L+ + Y M+ LV + A
Sbjct: 663 GMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEA 722
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K ++ D+ ++ K GRLE A + + G +P+ + D
Sbjct: 723 CKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDV 782
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE--IL 299
+ G + A+ + +A+ R VP T + + +E V+ A F E I
Sbjct: 783 LGKGGKLSHAL-IIFRAMAKKR-----CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSIS 836
Query: 300 KKAVDDLGVEVFEPLIRTYAAAG 322
K ++G V+ LI ++ G
Sbjct: 837 KGCTPNVG--VYSSLIDSFGKKG 857
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/200 (18%), Positives = 80/200 (40%), Gaps = 1/200 (0%)
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R + N++SGA + +MK G ++ + + V+ G + A +L
Sbjct: 224 LRTFGSTNNVSGALEIFNQMKSFG-CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFR 282
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D ++ + + ++G L + + + + ++ +I LV ++ A
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F ++ + ++ ++ AK GRLE A E+ + P+A + D
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G+ +A ++ D G
Sbjct: 403 GKAGEADMACGLFKEMKDRG 422
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 140/321 (43%), Gaps = 7/321 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A ++M++ + + F+ L+ L++ G + A ++EMK ++PD Y +
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +S A RV +EM G D T++ L + + AE L E++ R
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLG-CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER 396
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
DL + LI Y + GN + +++ +L ++Y ++I + DL A
Sbjct: 397 GVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKA 456
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ + + + + +++I ++ ++G++E A + +G PN T+
Sbjct: 457 NELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKG 516
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y R+G++K L+K + +P T T + + +E+++ GA I++K
Sbjct: 517 YCRSGNVKKGQQFLQKMMQD------NILPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570
Query: 302 AVDDLGVEVFEPLIRTYAAAG 322
+ + +I ++ G
Sbjct: 571 EMVQPDAVTYNMIINGFSEQG 591
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 134/323 (41%), Gaps = 11/323 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A AL++ M L + FNS++ K +K + + M S+ PD ++N+
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ V ++ A + +EM++ G V D +FS L ++ G + A L+E++
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRG-VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGL 326
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
D Y +I + + G++SE R+ + P+ ++Y ++ L L
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDV--VTYNTLLNGLCKQHRLL 384
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE+ E + T D+ +I Y ++G E A +L + + P+ +
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLI 444
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
D R GD+ A + + + P+ T + ++ V+ A GFL+ +
Sbjct: 445 DGMCRKGDLAKANELWDDM------HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEM 498
Query: 300 KKAVDDLGVEVFEPLIRTYAAAG 322
+ + + +I+ Y +G
Sbjct: 499 VSKGNLPNIMTYNSIIKGYCRSG 521
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 115/295 (38%), Gaps = 36/295 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A L +MK L L + + ++ + + G + + EM +PD TYN
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + + AE ++ EMK G V D TF+ L Y G FEKA + L ++
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERG-VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL-------------- 166
D+ AY LI + G+L++ +W + R FPN S L
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492
Query: 167 NMIQVLVNLKDLPG-------------------AEKCFKEWESGCATYDIRVTNVMIGAY 207
+ +V+ +LP ++ ++ D+ N +I Y
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KE + A + + P+A T+ + + + G+M+ A +K +G
Sbjct: 553 IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASG 607
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 99/267 (37%), Gaps = 34/267 (12%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
N ++ Y K+ +K +I EM+ + PD T+NV + A D+ A +++ M
Sbjct: 160 LNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMA 219
Query: 84 RDG----------------------------------RVAADWTTFSNLASIYVEAGLFE 109
G VA D +F+ L + G E
Sbjct: 220 NKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVE 279
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
+A + KE++ R D+ ++ LI L+ G + R ++ + Y +I
Sbjct: 280 EAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVI 339
Query: 170 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
+ A + E D+ N ++ K+ RL +AEEL + RG
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Query: 230 PNAKTWEIFSDYYLRNGDMKLAVDCLE 256
P+ T+ Y R+G+ + A+ +
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFD 426
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A L++M + M +NS++ Y ++G+ +K +Q+M +I+PD T+N
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNT 547
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ++ GA V M+++ V D T++ + + + E G E+A R K++
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKE-MVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS 606
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D Y LI + GN E +++
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKEAFQL 634
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 96/231 (41%), Gaps = 1/231 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L + + L + +NSL+ + G K + +M A I P+ TY++
Sbjct: 419 EKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSIL 478
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A ++EM G + + T++++ Y +G +K ++ L+++ N
Sbjct: 479 IDSHCEKGQVEEAFGFLDEMVSKGNLP-NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN 537
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL + LI Y + N+ + ++ + ++Y +I ++ A
Sbjct: 538 ILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAG 597
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+ FK+ + D +I + G + A +L + RG P+ K
Sbjct: 598 RVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 71/158 (44%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T + + Y ++ F+KA+ + E+E R D+ + LI + G++ + S+
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
+++ ++++ L + A++ F+ + D+R N++IG + + G +
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
E A + + ++RG P+ ++ + G M A
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHA 316
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 48/268 (17%), Positives = 105/268 (39%), Gaps = 7/268 (2%)
Query: 55 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
++YT N+ + + + A+ VI EM++ V D T + L AG + A
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRC-VFPDVVTHNVLIDARFRAGDVDAAIAL 214
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
+ + N+ + + ++ + + ++R++ S+ +I
Sbjct: 215 VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCR 274
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ ++ A K +KE + T D+ + +IG ++ G++++A + G P+
Sbjct: 275 VGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVI 334
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 294
+ + + R G M A+ ++ + G +P T T + ++ + AE
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEMVGLG------CLPDVVTYNTLLNGLCKQHRLLDAEE 388
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAG 322
L +K+ + F LI Y G
Sbjct: 389 LLNEMKERGVTPDLCTFTTLIHGYCRDG 416
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 106/271 (39%), Gaps = 43/271 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE + E+M+E L +N+LM Y++ G+P I M+ PD +YN
Sbjct: 310 LCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYN 369
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A AE V ++MKR G + + L S Y + G K E L ++
Sbjct: 370 ILVDAYGKAGFQDDAEAVFKDMKRVG-ITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCK 428
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D ++ LYG+ G ++ + R +
Sbjct: 429 SGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVM--------------------------- 461
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E G DI N++I Y + G +E E+L + +G P+ TW
Sbjct: 462 --------EKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIG 513
Query: 241 YYLRNGDMKLAVDCL---EKAIDTG-RGDGG 267
Y + KL + CL E+ ID G DGG
Sbjct: 514 AYSKK---KLYLKCLEIFEEMIDDGCYPDGG 541
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 120/296 (40%), Gaps = 7/296 (2%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+ Y +G EK A+ EM+ + + YN ++ L + AE + + MK+D
Sbjct: 196 LIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDA 255
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
T++ L ++Y +AG A + E+ + + ++ Y L+ + + G +
Sbjct: 256 -CKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKA 314
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
++ ++ A +Y +++ GA + F + D N+++ A
Sbjct: 315 EEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDA 374
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
Y K G ++AE + + +R G P K+ + Y + G + + L + +G
Sbjct: 375 YGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLD 434
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ S + + F + ++V L +++K + + LI Y AG
Sbjct: 435 TYVLNSMLNLYGRLGQFGKMEEV------LRVMEKGSYVADISTYNILINRYGQAG 484
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 9/201 (4%)
Query: 50 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 109
SS PD YN+ + A AE ++ + R T++ L Y +GL E
Sbjct: 149 SSFKPDVICYNLLIEAFGQKLLYKEAESTYLQL-LEARCIPTEDTYALLIKAYCISGLLE 207
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
KAE E+ N Y I + GN + I++ ++ +Y
Sbjct: 208 KAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETY---- 263
Query: 170 QVLVNLKDLPG----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
+L+NL G A K F E S +I ++ A+A+EG E AEE+ E+ +
Sbjct: 264 TMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQE 323
Query: 226 RGADPNAKTWEIFSDYYLRNG 246
G +P+ + + Y R G
Sbjct: 324 AGLEPDVYAYNALMEAYSRAG 344
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 5/253 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L ++M + +N+L+ K G + I+ +M IMP+ +Y+
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A + EM+ G +A D +++ L SIY + G E+A L+E+ +
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPG 180
+D+ Y L+ YG+ G EV +++ ++ PN ++Y +I
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL--LTYSTLIDGYSKGGLYKE 532
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F+E++S D+ + + +I A K G + +A L + + G PN T+ D
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 241 YYLRNGDMKLAVD 253
+ R+ M + D
Sbjct: 593 AFGRSATMDRSAD 605
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 110/275 (40%), Gaps = 37/275 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEM 82
F++L++ Y ++G E+ ++ MK + P+ TYN + A + + +EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 83 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 142
+R+G V D TF++L ++ GL+E A E+ NR +D+ +Y L+ + G
Sbjct: 331 QRNG-VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 143 LSEVYRIWRSL--RLAFPNTAN---------------------------------ISYLN 167
+ + I + + PN + +SY
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
++ + + A +E S D+ N ++G Y K+G+ + +++ +R
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
PN T+ D Y + G K A++ + G
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+E+A +L +M + + + +N+L+ Y K G +++ + EMK ++P+ TY+
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A + E K G + AD +S L + GL A + E+
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAG-LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 122 NAHRDLSAYQFLITLYGQTGNL 143
++ Y +I +G++ +
Sbjct: 579 GISPNVVTYNSIIDAFGRSATM 600
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 5/260 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L ++ E + ++ +NSL+ G +++ ++ +M ++ PD YT+N+ +
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
AL I A+ V+ M + G D T++ L Y +A + R
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE 332
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y LI Y +T + E +++ L + P A SY ++I L N + +
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA--SYNSLIDGLCNSGRISHVK 390
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K E D+ N++I A KEGR+ A + ++G PN T+ D Y
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
++ +A D + + +G
Sbjct: 451 CLRNNVNVAKDIFNRMVKSG 470
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 128/333 (38%), Gaps = 45/333 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A L +++ NL + +NSL+ +G + ++ EM S+ PD TYN
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + AL I A V+ M + G V + T++ + Y A+ +
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKG-VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDL 178
D+ Y LI Y +T + E +++ +R P+ A SY ++I L NL +
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA--SYNSLIDGLCNLGRI 526
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAK---------------EG------------ 211
P ++ E + D+ N+++ A+ K EG
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIV 586
Query: 212 -------RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
+L+ AE+ + G PN +T+ I + ++G A+ L K D R
Sbjct: 587 DNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRP 646
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
P + T + Q + D AE E
Sbjct: 647 ------PDAITFEIIIGVLLQRNETDKAEKLRE 673
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 81/221 (36%), Gaps = 1/221 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+++ + G K Q + A + D +TY + L+ I A +++EM+
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ V + +S L + G A ++ R D Y LI G
Sbjct: 188 KSS-VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
EV ++ + + + ++ +I L + A+ DI N +
Sbjct: 247 QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNAL 306
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ Y + A EL R +RG +P+ + + D Y +
Sbjct: 307 MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCK 347
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 126/286 (44%), Gaps = 7/286 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +L++M L +++ +N L++ K + + +M + PD +T+N
Sbjct: 66 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 125
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L VN A + ++M +G V A+ T++ L ++ G ++A + + ++ R
Sbjct: 126 IFGLCKVNKFEEALGLYQDMLLEG-VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI + GN+ + ++ + N NIS +I L ++ A
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ ++ T DI N +I K GR + A L ++ + G P+A T+ ++
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+ G A L + +D+G ++P+ T + +F +E D
Sbjct: 305 CKEGMFDDAHLLLSRGVDSG------FIPNEVTWYILVSNFIKEGD 344
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 100/254 (39%), Gaps = 3/254 (1%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
E M + G +N+L+ K G+ ++ EM+ P+ TY + +
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
+ A V++EM G +A + ++ L S + + A ++ ++ D+
Sbjct: 63 GRLEEARNVLDEMSGKG-LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
+ LI + E +++ + L I+Y +I + + A K +
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181
Query: 190 -SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
GC DI N +I A + G +E L E +G +PN + I + R G++
Sbjct: 182 FRGCPLDDI-TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240
Query: 249 KLAVDCLEKAIDTG 262
+ A++ L I G
Sbjct: 241 QHALEFLRDMIHRG 254
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 4/257 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A A L+KM+ L +P++ +++ ++K GH E + +EM + PD Y
Sbjct: 574 MPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYG 633
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + A A + A + MKRDG ++ + +++L +Y + G ++A A K LE
Sbjct: 634 VLINAFADAGSVKEAINYVNAMKRDG-LSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQ 692
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLP 179
+ + + +I LY + + E I+ SL+ AN ++ M+ + + +
Sbjct: 693 TDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKK--GEANEFTFAMMLCMYKKIGRIQ 750
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A ++ + D+ N MI YA +GR + A + + + P+ T++
Sbjct: 751 EAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLG 810
Query: 240 DYYLRNGDMKLAVDCLE 256
L+ G K AV LE
Sbjct: 811 VVLLKCGVSKQAVSKLE 827
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L++KM+EL + +N L++LYAK + + EM+ + + PD +Y + A +
Sbjct: 373 LMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYS 432
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE------------------ 109
+ ++ AE++I EM G + D T S L +Y++AG+ E
Sbjct: 433 IRHMVAEAEKLITEMDERG-LEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSE 491
Query: 110 ----------------KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+AER + L + +I YG + ++ +I+ S+
Sbjct: 492 CYSANIDAYGERGFILEAERVFVSCQEEKKCTVLE-FNVMIKAYGVVKDYAKAQKIFDSM 550
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPG-AEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
+ SY ++IQ+L D+P A K+ +S D +V+I +++K G
Sbjct: 551 KSNGVVPDKCSYSSLIQILTG-ADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGH 609
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
LE A++L + G P+ + + + + G +K A++
Sbjct: 610 LEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAIN 650
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 136/325 (41%), Gaps = 19/325 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A E M + + +++ FN+++ + G +++ ++Q+M+ PD+ TYN+
Sbjct: 333 KEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNIL 392
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++I A EM+ G + D ++ L Y + +AE+ + E++ R
Sbjct: 393 ISLYAKHDNIDLASNYFAEMEEAG-LQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERG 451
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D L +Y G L E + + LA + ++ Y I + AE
Sbjct: 452 LEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLA-GHMSSECYSANIDAYGERGFILEAE 510
Query: 183 KCFK--EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + E C + NVMI AY A+++ + + G P+ ++
Sbjct: 511 RVFVSCQEEKKCTVLEF---NVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQ 567
Query: 241 YYLRNGDMK-LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR--HFEQEKDVDGAEGFLE 297
L DM +A+ L+K G +P S I +F + H E + + E
Sbjct: 568 -ILTGADMPAMALAYLKKMQSAGLVS--DCIPYSVVISSFSKLGHLEMADKL-----YRE 619
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAG 322
++K V + V+ LI +A AG
Sbjct: 620 MVKHGVQP-DIIVYGVLINAFADAG 643
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 15/210 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ +Y+K G E+ ++ M + PD T + ++ + AE ++
Sbjct: 224 YGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWS 283
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF--LITLYGQTG 141
+ + T AS+ VE+ L H LS Y + LI YG+ G
Sbjct: 284 SCNSMKYEITNKKKAASVKVESSL-------------HPPHVSLSTYTYNTLIDTYGKAG 330
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
L E + ++ + +++ MI + N L ++ E D R N
Sbjct: 331 QLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYN 390
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPN 231
++I YAK ++ A G P+
Sbjct: 391 ILISLYAKHDNIDLASNYFAEMEEAGLQPD 420
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 93/228 (40%), Gaps = 5/228 (2%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 97
E++ QE K +++ +NV ++A V D + A+++ + MK +G V D ++S+
Sbjct: 510 ERVFVSCQEEKKCTVLE----FNVMIKAYGVVKDYAKAQKIFDSMKSNG-VVPDKCSYSS 564
Query: 98 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 157
L I A + A LK++++ D Y +I+ + + G+L +++R +
Sbjct: 565 LIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHG 624
Query: 158 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 217
I Y +I + + A + + + + N +I Y K G L+ A
Sbjct: 625 VQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAH 684
Query: 218 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
E + + P + D Y +K A + E G +
Sbjct: 685 EAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGEAN 732
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 26/166 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA--------------IIQEMK 48
E+A LE+M E + + ++ LY K G +K + I + K
Sbjct: 238 EEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKK 297
Query: 49 ASSIMPDS-----------YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 97
A+S+ +S YTYN + + A E M ++G V+ TF+
Sbjct: 298 AASVKVESSLHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEG-VSPTTVTFNT 356
Query: 98 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ I G ++ ++++E D Y LI+LY + N+
Sbjct: 357 MIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNI 402
>gi|242042129|ref|XP_002468459.1| hypothetical protein SORBIDRAFT_01g046280 [Sorghum bicolor]
gi|241922313|gb|EER95457.1| hypothetical protein SORBIDRAFT_01g046280 [Sorghum bicolor]
Length = 790
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA LEKMK + L +P++ +++ +AK G + +EM S + PD + Y+
Sbjct: 506 LPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKIGDLRMAEYLFREMVMSGVRPDVFVYS 565
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A V ++ A MK+DG + + T +++L +Y + G +A K L++
Sbjct: 566 ILIDAYAEVGNVQQASAYFGLMKKDG-LCENVTIYNSLIKLYTKVGYVAEARETYKLLKS 624
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLP 179
+A+ L A +I LY + E ++ L++ AN S+ M+ + +
Sbjct: 625 LDANAILYASNCMIDLYSDHCMVKEACEVFEGLKVR--GIANEFSHAMMVCMYKKVGRYD 682
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + KE ++ + N +I YA GR+E A ++ ++ PN T++
Sbjct: 683 VAHRICKEMQALGLLTQLLSYNSVIQMYASGGRMEEALKIFKKMLASNTAPNDATFQALK 742
Query: 240 DYYLRNGDMK 249
+R+G K
Sbjct: 743 VILVRSGVTK 752
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 114/277 (41%), Gaps = 32/277 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +M + S + FNS++ ++ K E++ ++++ M+ PD+ TYN+
Sbjct: 267 EKVSDTFNQMLREGVAPSVVTFNSMIHVWGKHHRMEQVASLVRMMEEFQCFPDTRTYNIL 326
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ NDI AE +MK + V D + L Y G+ KAE LKE++ R
Sbjct: 327 IALYRESNDIDIAEYYYCKMKGENLVP-DVVSCRTLLYGYSIRGMVTKAEALLKEMDERG 385
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANISYLNMIQVLVNLKDLP 179
D L +Y G L + +R + + +ANI +V
Sbjct: 386 FVVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIVL----- 440
Query: 180 GAEK----CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
AEK C K+ + NVMI AY +L+ A E+ + R G P+ T+
Sbjct: 441 -AEKAFIYCIKK-----KMLSVSACNVMIKAYGLVEKLDEACEIADGMERYGILPDYVTY 494
Query: 236 ----EIFSD--------YYLRNGD-MKLAVDCLEKAI 259
++ S YYL +KL DC+ ++
Sbjct: 495 ASLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSV 531
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 95/227 (41%), Gaps = 5/227 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKA K K L++ N ++ Y ++ I M+ I+PD TY
Sbjct: 440 LAEKAFIYCIKKKMLSVS----ACNVMIKAYGLVEKLDEACEIADGMERYGILPDYVTYA 495
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ L+ A +E+MK ++ +D +S + S + + G AE +E+
Sbjct: 496 SLIQLLSTAKLPKKAIYYLEKMKV-VKLLSDCIPYSVVISSFAKIGDLRMAEYLFREMVM 554
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI Y + GN+ + + ++ Y ++I++ + +
Sbjct: 555 SGVRPDVFVYSILIDAYAEVGNVQQASAYFGLMKKDGLCENVTIYNSLIKLYTKVGYVAE 614
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
A + +K +S A + +N MI Y+ ++ A E+ E + RG
Sbjct: 615 ARETYKLLKSLDANAILYASNCMIDLYSDHCMVKEACEVFEGLKVRG 661
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 120/325 (36%), Gaps = 63/325 (19%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
E+ ELN+ + +N ++ K + + + EM + + PD+ TY +
Sbjct: 131 EQGHELNV----IHYNVMLYTVGKARRWDLVLRLWHEMHSFGVAPDNSTYGTLINVCCQG 186
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA----ER----ALKELENR 121
S A + +M + G + D T + + + +AG +E A ER +++ +E
Sbjct: 187 GRESVALLWLGDMCKRG-LMPDEVTMNIVMQAHKKAGEYETAGLFFERWSSDSIRRMEG- 244
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++H L Y LI YG+ G+L +V +T N Q+L
Sbjct: 245 SSHYSLYTYNTLIDTYGKAGHLEKV-----------SDTFN-------QML--------- 277
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
G A + N MI + K R+E L P+ +T+ I
Sbjct: 278 -------REGVAP-SVVTFNSMIHVWGKHHRMEQVASLVRMMEEFQCFPDTRTYNILIAL 329
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
Y + D+ +A + G VP + RT + + V AE L K
Sbjct: 330 YRESNDIDIA------EYYYCKMKGENLVPDVVSCRTLLYGYSIRGMVTKAEALL----K 379
Query: 302 AVDDLGVEVFE----PLIRTYAAAG 322
+D+ G V E L R Y G
Sbjct: 380 EMDERGFVVDEYTQSALTRMYVNVG 404
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 4/257 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A A L+KM+ L +P++ +++ ++K GH E + +EM + PD Y
Sbjct: 575 MPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIVYG 634
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + A A + A + MKRDG ++ + +++L +Y + G ++A A K LE
Sbjct: 635 VLINAFADAGSVKEAINYVNAMKRDG-LSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQ 693
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLP 179
+ + + +I LY + + E I+ SL+ AN ++ M+ + + +
Sbjct: 694 TDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKK--GEANEFTFAMMLCMYKKIGRIQ 751
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A ++ + D+ N MI YA +GR + A + + + P+ T++
Sbjct: 752 EAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSIFQEMMKAAVQPDECTYKSLG 811
Query: 240 DYYLRNGDMKLAVDCLE 256
L+ G K AV LE
Sbjct: 812 VVLLKCGVSKQAVSKLE 828
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L++KM+EL + +N L++LYAK + + EM+ + + PD +Y + A +
Sbjct: 374 LMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYS 433
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE------------------ 109
+ ++ AE++I EM G + D T S L +Y++AG+ E
Sbjct: 434 IRHMVAEAEKLITEMDERG-LEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSE 492
Query: 110 ----------------KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+AER + L + +I YG + ++ +I+ S+
Sbjct: 493 CYSANIDAYGERGFILEAERVFVSCQEEKKCTVLE-FNVMIKAYGVVKDYAKAQKIFDSM 551
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPG-AEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
+ SY ++IQ+L D+P A K+ +S D +V+I +++K G
Sbjct: 552 KSNGVVPDKCSYSSLIQILTG-ADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGH 610
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
LE A++L + G P+ + + + + G +K A++
Sbjct: 611 LEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAIN 651
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 136/325 (41%), Gaps = 19/325 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A E M + + +++ FN+++ + G +++ ++Q+M+ PD+ TYN+
Sbjct: 334 KEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNIL 393
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++I A EM+ G + D ++ L Y + +AE+ + E++ R
Sbjct: 394 ISLYAKHDNIDLASNYFAEMEEAG-LQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERG 452
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D L +Y G L E + + LA + ++ Y I + AE
Sbjct: 453 LEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLA-GHMSSECYSANIDAYGERGFILEAE 511
Query: 183 KCFK--EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + E C + NVMI AY A+++ + + G P+ ++
Sbjct: 512 RVFVSCQEEKKCTVLEF---NVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQ 568
Query: 241 YYLRNGDMK-LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR--HFEQEKDVDGAEGFLE 297
L DM +A+ L+K G +P S I +F + H E + + E
Sbjct: 569 -ILTGADMPAMALAYLKKMQSAGLVS--DCIPYSVVISSFSKLGHLEMADKL-----YRE 620
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAG 322
++K V + V+ LI +A AG
Sbjct: 621 MVKHGVQP-DIIVYGVLINAFADAG 644
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 15/210 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ +Y+K G E+ ++ M + PD T + ++ + AE ++
Sbjct: 225 YGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWS 284
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF--LITLYGQTG 141
+ + T AS+ VE+ L H LS Y + LI YG+ G
Sbjct: 285 SCNSMKYEITNKKKAASVKVESSL-------------HPPHVSLSTYTYNTLIDTYGKAG 331
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
L E + ++ + +++ MI + N L ++ E D R N
Sbjct: 332 QLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYN 391
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPN 231
++I YAK ++ A G P+
Sbjct: 392 ILISLYAKHDNIDLASNYFAEMEEAGLQPD 421
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 93/228 (40%), Gaps = 5/228 (2%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 97
E++ QE K +++ +NV ++A V D + A+++ + MK +G V D ++S+
Sbjct: 511 ERVFVSCQEEKKCTVLE----FNVMIKAYGVVKDYAKAQKIFDSMKSNG-VVPDKCSYSS 565
Query: 98 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 157
L I A + A LK++++ D Y +I+ + + G+L +++R +
Sbjct: 566 LIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHG 625
Query: 158 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 217
I Y +I + + A + + + + N +I Y K G L+ A
Sbjct: 626 VQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSGNTVIYNSLIKLYTKVGYLKEAH 685
Query: 218 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
E + + P + D Y +K A + E G +
Sbjct: 686 EAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIFESLKKKGEAN 733
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 26/166 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA--------------IIQEMK 48
E+A LE+M E + + ++ LY K G +K + I + K
Sbjct: 239 EEALVWLERMNEQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKK 298
Query: 49 ASSIMPDS-----------YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 97
A+S+ +S YTYN + + A E M ++G V+ TF+
Sbjct: 299 AASVKVESSLHPPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEG-VSPTTVTFNT 357
Query: 98 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ I G ++ ++++E D Y LI+LY + N+
Sbjct: 358 MIHICGNHGQLKEVTFLMQKMEELQCPPDTRTYNILISLYAKHDNI 403
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 140/340 (41%), Gaps = 48/340 (14%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F ++ YAK G A + M+A I P+++ + + A A D+ GA +EEMK
Sbjct: 300 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 359
Query: 84 RDGRVAADWTTFSNLASIYV------EAGLFEKAERALKELEN----------------- 120
+G + T+S L S + ++G E+AE ++E+E
Sbjct: 360 SEG-LELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGY 418
Query: 121 ---RNAHRDLS---------------AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+N ++ L +Y L+ LY + G +++ I + + N
Sbjct: 419 TIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNN 478
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+Y +I ++L D A F+E D + N++I A+ K G ++ A + E+
Sbjct: 479 KTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 538
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
++ P+ + + + Y GDMK A+D L+ +G VP+ T +
Sbjct: 539 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG------CVPTVMTYNALIHG 592
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
++ V A L+ + A + ++R YAA+G
Sbjct: 593 LVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 632
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 110/258 (42%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A+ E+M L +N L+ + K G+ ++ I+++M+ + P + + +
Sbjct: 497 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 556
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A D+ A ++ M+R G V T++ L V ++A L ++
Sbjct: 557 GYAVAGDMKSALDTLDLMRRSGCVPT-VMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 615
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y ++ Y +G++ + + + ++ + Y +++ + A
Sbjct: 616 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 675
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E + + N++I +A+ G + AE+L ++ + G PN T+ + + +
Sbjct: 676 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 735
Query: 245 NGDMKLAVDCLEKAIDTG 262
GDM+ A +E+ +D G
Sbjct: 736 AGDMQRAEKVIEEMVDVG 753
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 1/249 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + E++KE S + + L+ LY K G K +I +EM++ I ++ TY++ +
Sbjct: 426 KCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLI 485
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++D + A + EEM R G + D ++ L + + G ++A L++++
Sbjct: 486 NGFIHLHDFANAFAIFEEMLRSG-LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERM 544
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
A++ +I Y G++ +R + ++Y +I LV + A
Sbjct: 545 QPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVS 604
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ T + +++ YA G + A E + + G + +E
Sbjct: 605 VLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACC 664
Query: 244 RNGDMKLAV 252
++G M+ A+
Sbjct: 665 KSGRMQSAL 673
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 127/337 (37%), Gaps = 44/337 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L+ +M+E + ++S+M Y + K + + +K P +Y
Sbjct: 390 ERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCL 449
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ A + +EM+ G + + T+S L + ++ F A +E+
Sbjct: 450 LNLYVKIGKVAKALSISKEMESCG-IKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 508
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + Y LI + + GN+ I ++ +N ++ +I+
Sbjct: 509 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE------------ 556
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
YA G +++A + + RR G P T+
Sbjct: 557 -----------------------GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 593
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+R ++ AV L+K G P+ T MR + D+ A + +K++
Sbjct: 594 VRKHKVQRAVSVLDKMSIAG------ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 647
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVM--LRRLKMEKV 337
L V ++E L+R +GR + R + +K+
Sbjct: 648 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 684
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA K+KE L + +L+ K+G + A+ +EM I +++ YN+ +
Sbjct: 636 KAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 695
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A D+ AE ++++MK DG V + T+++ + +AG ++AE+ ++E+ +
Sbjct: 696 DGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 754
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
++ Y LI + + + + ++LA SY ++ L++
Sbjct: 755 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLS 805
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A+ +M + ++ +N L+ +A+ G + ++++MK + P+ +TY +
Sbjct: 670 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSY 729
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A D+ AE+VIEEM G + + T++ L + L ++A + +E++
Sbjct: 730 INACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG 788
Query: 123 AHRDLSAYQFLIT 135
D ++Y L+T
Sbjct: 789 LKPDEASYHCLVT 801
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 117/296 (39%), Gaps = 7/296 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y K G + ++ EM + PD TY++ + A A +++EM+
Sbjct: 162 YNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 221
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
DG V FS + + + + G ++KA L+E+ D Y +I +G+ L
Sbjct: 222 ADG-VKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL 280
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ +R +++ +I A + F E N+M
Sbjct: 281 GHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIM 340
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I +E R E E + + +G PN T+ D Y R+G K AVDC+E +
Sbjct: 341 INLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAM----K 396
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
DG K PSS + + Q D A ++ ++ + V LI +
Sbjct: 397 ADGLK--PSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 450
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 119/299 (39%), Gaps = 42/299 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A LL++M+ + SS F+ ++ + G +K A+++EM AS + PD + YNV
Sbjct: 211 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVM 270
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N + A + M+ +G + D T++ L + + G ++A E+ N
Sbjct: 271 IDTFGKYNCLGHAMDAFDRMREEG-IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 329
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I L G+ W G E
Sbjct: 330 CPLGTTTYNIMINLLGEEQR-------WE----------------------------GVE 354
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
E + +I ++ Y + GR + A + E + G P++ + + Y
Sbjct: 355 AMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHALVNAY 414
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ G A++ + KA+ R DG + S+ + + + F +++ + A L+ +K+
Sbjct: 415 AQRGLADHALNVV-KAM---RADGLE--ASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 467
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E EA+L +MKE L + + + +L+ +Y ++G ++ I+ MKA + P S Y+
Sbjct: 351 EGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSSTMYHAL 410
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A A V++ M+ DG + A ++L + + E +A L+ ++
Sbjct: 411 VNAYAQRGLADHALNVVKAMRADG-LEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENG 469
Query: 123 AHRDLSAYQFLI 134
D+ Y L+
Sbjct: 470 LRPDVITYTTLM 481
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 126/286 (44%), Gaps = 7/286 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +L++M L +++ +N L++ K + + +M + PD +T+N
Sbjct: 459 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 518
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L VN A + ++M +G V A+ T++ L ++ G ++A + + ++ R
Sbjct: 519 IFGLCKVNKFEEALGLYQDMLLEG-VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI + GN+ + ++ + N NIS +I L ++ A
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ ++ T DI N +I K GR + A L ++ + G P+A T+ ++
Sbjct: 638 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 697
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+ G A L + +D+G ++P+ T + +F +E D
Sbjct: 698 CKEGMFDDAHLLLSRGVDSG------FIPNEVTWYILVSNFIKEGD 737
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 43/277 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N ++ + P+ +P + EM + I P YT+ V M+AL VN++ A ++++M
Sbjct: 203 YNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMT 262
Query: 84 RDGRVA----------------------------------ADWTTFSNLASIYVEAGLFE 109
R G V D TF++ +
Sbjct: 263 RHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIH 322
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
+A + + + R + Y L+ + G + E R L PN + + +I
Sbjct: 323 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLI 378
Query: 170 QVLVNLKDLPGAEKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
V+ L A+ E GC DI N +I K+G L +A EL + +G
Sbjct: 379 NGYVSRGRLDEAKAVMHESMLSVGCGP-DIFTYNTLILGLCKKGYLVSARELMNEMQIKG 437
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
+PN T+ I D + + G ++ A + L++ +G+G
Sbjct: 438 CEPNVITYTILIDRFCKEGRLEEARNVLDEM--SGKG 472
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 103/263 (39%), Gaps = 3/263 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E + E M + G +N+L+ K G+ ++ EM+ P+ TY
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A V++EM G +A + ++ L S + + A ++ +
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKG-LALNAVGYNCLISALCKDEKVQDALNMFGDMSS 505
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ + LI + E +++ + L I+Y +I + +
Sbjct: 506 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 565
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A K + GC DI N +I A + G +E L E +G +PN + I
Sbjct: 566 ALKLVNDMLFRGCPLDDI-TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 624
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
+ R G+++ A++ L I G
Sbjct: 625 NGLCRTGNIQHALEFLRDMIHRG 647
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 1/240 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + ++M L G +N+ + K G+ E ++ +M+A++I P+ TY+
Sbjct: 111 EDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVVLDMEANNIKPNVVTYSTL 170
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M + + A ++ E+MK G + D ++ L +IYV+ G +++ +++EN
Sbjct: 171 MDGFSKLEKYDEALKLREKMKSLG-IQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLG 229
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+D Y LI YG+ G L V + + +R + ++Y +I + A
Sbjct: 230 IEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAF 289
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +++ D+ + + I AK G +E A L + + G PN T+ D +
Sbjct: 290 NVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAF 349
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 97/234 (41%), Gaps = 2/234 (0%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAE 76
G + ++L++ YA++G + +++ MK + + P + +YN + A D+
Sbjct: 20 GNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTL 79
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
+M +DG + D TF++L + AG E A E+ + + RD+ Y +
Sbjct: 80 GYFRQMLQDG-LCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDA 138
Query: 137 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 196
+ GN+ ++ + ++Y ++ L+ A K ++ +S D
Sbjct: 139 ICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLD 198
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
N ++ Y K G+ + + E G + + T+ + Y + G + +
Sbjct: 199 RVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDM 252
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M K E +L MKE + S+ +NSLM +Y++ G EK I+ E+K+S + PD Y+YN
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 667
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ EMK G + D T++ YV +FE+A ++ +
Sbjct: 668 TVIYAYGRKGQMKEASRLFSEMKCSG-LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVT 726
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
+ + Y ++ Y + G L++ +L P + N+ +VL
Sbjct: 727 QGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVL 778
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 9/318 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++++M+ + S + +NSL++ Y K G E+ A+ QEM+ I PD TY
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTL 354
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I A +EM R+G + T++ L ++ G F + EL +
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNG-CKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAG 413
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + L+ ++GQ G SEV +++ ++ A +Y+++I A
Sbjct: 414 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 473
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +K D+ N ++ A A+ GR E AE+L R P+ ++ Y
Sbjct: 474 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAY 533
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE-GFLEILKK 301
N + L I + R + W+ ++T + + ++ AE FLE+ +K
Sbjct: 534 A-NAKRLDKMKALSDDIYSERIEPHNWL-----VKTLVLVNSKVNNLAEAEKAFLELRQK 587
Query: 302 AVDDLGVEVFEPLIRTYA 319
L + V ++ Y
Sbjct: 588 RC-SLDINVLNAMVSIYG 604
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 4/258 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L +M+E + ++SL+ YA +K+ A+ ++ + I P ++
Sbjct: 505 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 564
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + VN+++ AE+ E+ R R + D + + SIY + + K E+ L ++
Sbjct: 565 VLVNSKVNNLAEAEKAFLEL-RQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA 623
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + Y L+ +Y + G+ + I ++ + SY +I + A
Sbjct: 624 INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEAS 683
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F E + D+ N+ + +Y E A EL +G PN +T+ + Y
Sbjct: 684 RLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 743
Query: 243 LRNG---DMKLAVDCLEK 257
RNG D K+ V L +
Sbjct: 744 CRNGKLTDAKIFVSNLPQ 761
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + ++M E + +N++++ A+ G E+ + EM+ PD Y+Y+ +
Sbjct: 472 AMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLH 531
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A A + + + +++ + +W L + + +AE+A EL +
Sbjct: 532 AYANAKRLDKMKALSDDIYSERIEPHNWLV-KTLVLVNSKVNNLAEAEKAFLELRQKRCS 590
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D++ ++++YG+ + +V +I ++ + N + +Y +++ + L D E
Sbjct: 591 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 650
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E +S D N +I AY ++G+++ A L + G P+ T+ IF Y+
Sbjct: 651 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 710
Query: 245 NGDMKLAVDCLEKAIDTG 262
N + A++ + + G
Sbjct: 711 NSMFEEAIELVRYMVTQG 728
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 1/255 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L+ MKE + +N+L++ + ++ + EMKAS PD T+N +
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A VI+EM+R G T+++L S YV+ GL E+A +E+E + D+
Sbjct: 290 KARRHDEAIEVIQEMERVG-CPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDV 348
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI+ + G + + + +Y +I++ P F E
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
S DI N ++ + + G + + ++ G P T+ Y R G
Sbjct: 409 LRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468
Query: 248 MKLAVDCLEKAIDTG 262
LA+ ++ ++ G
Sbjct: 469 FDLAMQIYKRMMEAG 483
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWM 63
A A+ +M + + + + +N ++ +Y+K P +++ ++ MK + PD YTYN +
Sbjct: 191 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLI 250
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +V +EMK G D TF++L +Y +A ++A ++E+E
Sbjct: 251 SCCRRRALYKEAAQVFDEMKASG-FEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI+ Y + G L + + + + + ++Y +I L + A
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E +GC ++ N +I + G+ + + R G P+ TW +
Sbjct: 370 EYDEMVRNGCKP-NLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVF 428
Query: 243 LRNG 246
+NG
Sbjct: 429 GQNG 432
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 138/337 (40%), Gaps = 7/337 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EK+ L++M+ ++ +NSL+ + K G+ +K A+ + M S + PD+YT+N
Sbjct: 69 LLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFN 128
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V M A + ++ EEM+ + + T+S L + G EKA + ++++
Sbjct: 129 VLMNAFKKAKRVDSVWKLFEEMQNQ-NCSPNVITYSILIDAVCKCGGVEKALKVFLDMKS 187
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R ++ Y +I G++G++ + + ++ + + Y ++I L
Sbjct: 188 RGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADA 247
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K F+E S D ++ GR A + + AR G + + + D
Sbjct: 248 AAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLID 307
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
++ + A + + + G VP T M + + A L +K
Sbjct: 308 TLCKSKRLDEAWEIFGELEEDG------LVPDVYTFNALMDGLCKSGRIHDAFILLGDMK 361
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+A V V+ LI +GR L+M+ +
Sbjct: 362 RAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSL 398
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 121/317 (38%), Gaps = 11/317 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKA + MK + + S++ K+GH +K + +EM + ++ YN
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A ++ EM G + D TF++L AG +A R +E +
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKG-LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV 293
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D++ Y LI ++ L E + I+ L ++ ++ L + A
Sbjct: 294 GCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA 353
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ + T D+ V N +I K GR+E A +L + G +P+ T+ D
Sbjct: 354 FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDE 413
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ G ++ A+ E+ K ++ T T + VD A +K+
Sbjct: 414 SCKGGRIEDALRLFEEI-------SAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQ 466
Query: 302 AVDDLGVEVFEPLIRTY 318
D V +P TY
Sbjct: 467 ETVD---GVIDPDFVTY 480
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 10/249 (4%)
Query: 95 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
F LA Y AGL EK+ ALK +E SAY LI + + G + ++R +
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 214
+ ++ ++ K + K F+E ++ + ++ +++I A K G +E
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176
Query: 215 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 274
A ++ + RG PN T+ D ++G + A E+ G V +
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEG------LVATRV 230
Query: 275 TIRTFMRHFEQEKDVDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLK 333
+ + + D A F E+L K + V F L+ AGR S RR+
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHV-TFTSLVYGLGVAGRASEA--RRIF 287
Query: 334 MEKVEVSEA 342
E +V A
Sbjct: 288 QEARDVGCA 296
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 115/262 (43%), Gaps = 4/262 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A +L++M E ++ N ++ K G + + M + PD+ +Y
Sbjct: 297 MVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYT 356
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ L + A+ +++EM R+ + TF+ I + GL E+A +++++
Sbjct: 357 TVLKGLCRAERWNDAKELLKEMVRNN-CPPNEVTFNTFICILCQKGLIEQAIMLIEQMQE 415
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y L+ + G++ ++RS+ PNT I+Y ++ L N + L
Sbjct: 416 HGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK-PNT--ITYTTLLTGLCNAERLDA 472
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E ++ NV++ + ++G L+ A EL E+ G PN T+ D
Sbjct: 473 AAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFD 532
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
++ + A++ L + G
Sbjct: 533 GITKDCSSEDALELLHGLVSKG 554
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 20/296 (6%)
Query: 63 MRALAAVNDISGAERVIE-EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R L A D++GA R++E RDG A D + L G A R L+ E
Sbjct: 46 LRRLIAREDLAGAARLVELSASRDGE-APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGS 104
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ D+ AY L+ Y + G+L R+ S+ +A P+ +Y +I+VL + + A
Sbjct: 105 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA-PDA--YTYTPLIRVLCDRGRVADA 161
Query: 182 EKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ GC + T V++ A K E A + + R +G PN T+ + +
Sbjct: 162 LSLLDDMLRRGCQPNVVTYT-VLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 220
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEIL 299
R G + A D L + G P + + T ++ K D E F E++
Sbjct: 221 GMCREGRVDDARDLLNRLFSYG------CQPDTVSYTTLLKGLCASKRWDDVEELFAEMM 274
Query: 300 KKAVDDLGVEV-FEPLIRTYAAAG---RTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
+K + + EV F+ LIR + G R V+ + + E + ++ +IC
Sbjct: 275 EK--NCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSIC 328
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/335 (18%), Positives = 128/335 (38%), Gaps = 45/335 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y + GH + +I M + PD+YTY +R L ++ A ++++M
Sbjct: 113 YNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDML 169
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R G + T++ L + FE+A L E+ + ++ Y +I + G +
Sbjct: 170 RRG-CQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 228
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGC----ATYDIR 198
+ + L +SY +++ L K E+ F E E C T+D+
Sbjct: 229 DDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 288
Query: 199 V------------------------------TNVMIGAYAKEGRLENAEELKERARRRGA 228
+ N++I + K+GR+++A + G
Sbjct: 289 IRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGC 348
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+P+ ++ R A + L++ + P+ T TF+ Q+
Sbjct: 349 NPDTISYTTVLKGLCRAERWNDAKELLKEMVRN------NCPPNEVTFNTFICILCQKGL 402
Query: 289 VDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
++ A +E +++ +GV + L+ + G
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 105/263 (39%), Gaps = 6/263 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A L+E+M+E + +N+L+ + GH I + ++ ++ P++ TY
Sbjct: 402 LIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH---IDSALELFRSMPCKPNTITYT 458
Query: 61 VWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ L + A ++ EM RD + TF+ L + + + G ++A ++++
Sbjct: 459 TLLTGLCNAERLDAAAELVAEMLHRD--CPPNVVTFNVLVNFFCQKGFLDEAIELVEQMM 516
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+L Y L + + + + L + I++ ++I +L +
Sbjct: 517 EHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVE 576
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + F + V N ++ K ++NA + G PN T+ I
Sbjct: 577 EAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILI 636
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
+ R G +K A D L G
Sbjct: 637 EGLAREGLLKEAQDLLSMLCSRG 659
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 115/297 (38%), Gaps = 14/297 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ LL++M N + + FN+ + + + G E+ +I++M+ TYN +
Sbjct: 371 AKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVN 430
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
I A E+ R + T++ L + A + A + E+ +R+
Sbjct: 431 GFCVQGHIDSAL----ELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCP 486
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ + L+ + Q G L E + + PN I+Y + + A
Sbjct: 487 PNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNL--ITYNTLFDGITKDCSSEDAL 544
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ S + D+ + +IG +KE R+E A ++ A+ G P A +
Sbjct: 545 ELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGL 604
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ ++ A+D L + G +P+ T + +E + A+ L +L
Sbjct: 605 CKRHEIDNAIDFLAYMVSNG------CMPNESTYIILIEGLAREGLLKEAQDLLSML 655
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 102/260 (39%), Gaps = 5/260 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +LL+ M + + + L+ K E+ A++ EM+A P+ TYNV +
Sbjct: 161 ALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 220
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ + A ++ + G D +++ L + ++ E E+ +N
Sbjct: 221 GMCREGRVDDARDLLNRLFSYG-CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM 279
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAEK 183
+ + LI + + G + ++ + + N + N+ I + + A K
Sbjct: 280 PNEVTFDMLIRFFCRGGMVERAIQVLQQMT-EHECATNTTLCNIVINSICKQGRVDDAFK 338
Query: 184 CFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
S GC I T V+ G E R +A+EL + R PN T+ F
Sbjct: 339 FLNNMGSYGCNPDTISYTTVLKGLCRAE-RWNDAKELLKEMVRNNCPPNEVTFNTFICIL 397
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G ++ A+ +E+ + G
Sbjct: 398 CQKGLIEQAIMLIEQMQEHG 417
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L++M++ + + +++L+ L K K +I +K S IMPD YN +
Sbjct: 165 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGK 224
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A+ +++EM+ G V D ++S L S+YVE F +A E+ DL+
Sbjct: 225 AKLFREAKLLMKEMREVG-VMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLT 283
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ E R++ S+R +SY +++V + A F+
Sbjct: 284 TCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLM 343
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N MI Y K E A L + + RG +PNA T+ + + G +
Sbjct: 344 QKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKL 403
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 404 DRAAMLFQKLRSSG 417
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 128/308 (41%), Gaps = 19/308 (6%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + + +++M++D RV+ D +SNL +
Sbjct: 128 GLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQD-RVSGDLVLYSNLIEL 186
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + KA L+ DL AY +I ++G+ E + + +R
Sbjct: 187 SRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPD 246
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+SY ++ V V + A F E D+ NVMI Y + + A+ L
Sbjct: 247 TVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFW 306
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRTFM 280
R+ G +PN ++ Y G+ +L + + + D + V + T I+ +
Sbjct: 307 SMRKMGIEPNVVSYNTLLRVY---GETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYG 363
Query: 281 RHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAAAGRT--SPVMLRRLKM 334
+ E EK + L + + + G+E + +I + AG+ + ++ ++L+
Sbjct: 364 KSLEHEKATN--------LMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRS 415
Query: 335 EKVEVSEA 342
VE+ +
Sbjct: 416 SGVEIDQV 423
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 109/241 (45%), Gaps = 20/241 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 369 EKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTM 428
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+K + + I AG E+A ++ +
Sbjct: 429 IVAYERSGLVAHAKRLLHELKHPDSIPRETAI-----KILARAGRIEEATWVFRQAFDAG 483
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVN----LK 176
+D+S + ++ L+ + + V ++ +R A FP++ N+I +++N L
Sbjct: 484 EVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDS------NVIALVLNAYGKLH 537
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ A+ +KE + + V M+ Y E L ER +DPN E
Sbjct: 538 EFEKADALYKEMQEEECVFPDEVHFQMLSLYGARKDFMMIEALFERL---DSDPNINKKE 594
Query: 237 I 237
+
Sbjct: 595 L 595
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 115/292 (39%), Gaps = 11/292 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ +M E N ++ +Y + ++ + M+ I P+ +YN +
Sbjct: 265 EALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLL 324
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R A + M++ + + T++ + +Y ++ EKA ++E++NR
Sbjct: 325 RVYGETELFGEAIHLFRLMQKKD-IEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGI 383
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y +I+++G+ G L +++ LR + + Y MI + A++
Sbjct: 384 EPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKR 443
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E + D I A+ GR+E A + +A G + + D +
Sbjct: 444 LLHELKHP----DSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFS 499
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
RN ++ EK RG G + P S I + + + + + A+
Sbjct: 500 RNRKPANVIEVFEKM----RGAG--YFPDSNVIALVLNAYGKLHEFEKADAL 545
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L++MKE + +NSL+ +K ++ + + EM + + P+++TY ++
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ + A++ ++EM+ G V + + L + Y + G +A A + + ++ D
Sbjct: 534 EASEFASADKYVKEMRECG-VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+ + + + I+R +R SY +I L ++ A F E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
T ++ + N+++G + + G +E A+EL + +G PNA T+ D Y ++GD
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 248 M 248
+
Sbjct: 713 L 713
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 143/357 (40%), Gaps = 59/357 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA+AL + M L + + SL+ Y + + + ++ EMK +I+ YTY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + + D+ GA +++EM G + ++ L +++ F A R LKE++ +
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 123 AHRDLSAYQFLITLYGQTGNLSE-----VYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
D+ Y LI + + E V + L+ PN +Y I + +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK---PNA--FTYGAFISGYIEASE 537
Query: 178 LPGAEKCFKEW-ESG------------------------CATY----------DIRVTNV 202
A+K KE E G C+ Y D + V
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++ K ++++AEE+ R +G P+ ++ + + + + G+M+ A ++ ++ G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
P+ + F + +++ A K+ +D++ V+ P TY
Sbjct: 658 ------LTPNVIIYNMLLGGFCRSGEIEKA-------KELLDEMSVKGLHPNAVTYC 701
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 98/254 (38%), Gaps = 41/254 (16%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ AE + +M+ + + L+ ++K G+ +K +I EM + P+ YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +I A+ +++EM G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKG----------------------------------- 692
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
H + Y +I Y ++G+L+E +R++ ++L + Y ++ L D+ A
Sbjct: 693 -LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER----ARRRGADPNAKTWEI 237
F + GCA+ N +I K G+ E E+ R + R PN T+ I
Sbjct: 752 ITIFGTNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 238 FSDYYLRNGDMKLA 251
DY + G+++ A
Sbjct: 811 MIDYLCKEGNLEAA 824
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 126/301 (41%), Gaps = 11/301 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA ++ ++M E L + + +N L+ + ++G EK ++ EM + P++ TY
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--EN 120
+ D++ A R+ +EMK G V D ++ L ERA+
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLV-PDSFVYTTLVD---GCCRLNDVERAITIFGTNK 759
Query: 121 RNAHRDLSAYQFLITL---YGQTGNLSEVY-RIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ + + LI +G+T +EV R+ F +++Y MI L
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+L A++ F + ++ + ++ Y K GR + + A G +P+ +
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ + +L+ G A+ +++ D G + S T R + F + +++ AE +
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL-SISTCRALLSGFAKVGEMEVAEKVM 938
Query: 297 E 297
E
Sbjct: 939 E 939
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 1/213 (0%)
Query: 32 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 91
+ G EK +I+E I P++YTYN + A D SG E++++ MK+DG V +
Sbjct: 216 CRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDG-VVYN 274
Query: 92 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
T++ L + V+ G E+ E+ R D+ Y LI+ + GN+ + ++
Sbjct: 275 KVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFD 334
Query: 152 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
L ++ +Y +I + + ++ AE E +S V N +I Y ++G
Sbjct: 335 ELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKG 394
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
++ A + + ++G + T + + R
Sbjct: 395 MIDEASMIYDVMEKKGFQADVFTCNTIASCFNR 427
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 104/231 (45%), Gaps = 1/231 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
E L ++M+E + + SL++ + G+ ++ + E+ ++P S+TY +
Sbjct: 294 VEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALID 353
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ V ++ AE ++ EM+ G V F+ L + Y G+ ++A +E +
Sbjct: 354 GVCKVGEMGAAEILMNEMQSKG-VNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQ 412
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ + + + + E + + + +SY N+I V ++ A++
Sbjct: 413 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRL 472
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
F E S + NVMI AY K+G+++ A +L + G DP++ T+
Sbjct: 473 FVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTY 523
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE L+ +M+ + + + FN+L+ Y + G ++ I M+ D +T N
Sbjct: 364 AEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIAS 423
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A++ + M +G V +++NL +Y + G E+A+R E+ ++
Sbjct: 424 CFNRLKRYDEAKQWLFRM-MEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQ 482
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y +I Y + G + E ++W +++ + + +Y ++I ++ A +
Sbjct: 483 PNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRL 542
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
F E + VMI +K G+ + A L + +R+G + K +
Sbjct: 543 FSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVY 593
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 7/250 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
E +L+ MK+ + ++ + + L+ L K G + + EM+ I D + Y +
Sbjct: 259 VEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLIS 318
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+I A + +E+ G + + T+ L + G AE + E++++ +
Sbjct: 319 WNCRKGNIKRAFLLFDELTEKGLLPSS-HTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 377
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVN-LKDLPGAE 182
+ LI Y + G + E I+ + + F A++ N I N LK A+
Sbjct: 378 ITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQ--ADVFTCNTIASCFNRLKRYDEAK 435
Query: 183 K-CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F+ E G + TN +I Y KEG +E A+ L + PNA T+ +
Sbjct: 436 QWLFRMMEGGVRLSTVSYTN-LIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYA 494
Query: 242 YLRNGDMKLA 251
Y + G +K A
Sbjct: 495 YCKQGKVKEA 504
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ L +M E + S++ + +L+ +Y K G+ E+ + EM + + P++ TYNV
Sbjct: 432 DEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVM 491
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + A ++ MK +G + D T+++L A ++A R E+ +
Sbjct: 492 IYAYCKQGKVKEARKLWANMKANG-MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 550
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
++ Y +I+ + G E + ++ ++
Sbjct: 551 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEIK 582
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 6/159 (3%)
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
+Y +I + +D G EK K + Y+ ++I K G++ + E+L +
Sbjct: 242 TYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEM 301
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
R RG + + + + R G++K A ++ + G +PSS T +
Sbjct: 302 RERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKG------LLPSSHTYGALIDGV 355
Query: 284 EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ ++ AE + ++ ++ VF LI Y G
Sbjct: 356 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKG 394
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 140/319 (43%), Gaps = 24/319 (7%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE L ++M L S + +N+L+ Y K G+PEK + + MKA I P T+N ++
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 123
L + AE V++EMK G V D TFS L Y EKAE AL E ++
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFV-PDAFTFSILFDGYSSN---EKAEAALGVYETAVDS 348
Query: 124 HRDLSAY--QFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLP 179
++AY L+ + G + + I R + PN + Y MI DL
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN--EVIYNTMIDGYCRKGDLV 406
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
GA + E D N +I + + G +ENAE+ + + +G P+ +T+ I
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y R + D L++ D G +P+ + T + + + A +I+
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNG------TMPNVVSYGTLINCLCKGSKLLEA----QIV 516
Query: 300 KKAVDDLGVEVFEPLIRTY 318
K+ ++D GV P +R Y
Sbjct: 517 KRDMEDRGV---SPKVRIY 532
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 120/321 (37%), Gaps = 61/321 (19%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K L +MK + S +N L+ K + EM A ++P TYN +
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + +V E MK D + TF+ L +AG+ E AE LKE+++
Sbjct: 257 DGYCKAGNPEKSFKVRERMKAD-HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D A+ F I G + N AE
Sbjct: 316 VPD--AFTFSILFDGYSSN------------------------------------EKAEA 337
Query: 184 CFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+E+ + + ++++ A KEG++E AEE+ R +G PN + D
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Query: 241 YYLRNGDM---KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y R GD+ ++ ++ +EK G K P +R F + +++ AE
Sbjct: 398 GYCRKGDLVGARMKIEAMEK-------QGMK--PDHLAYNCLIRRFCELGEMENAE---- 444
Query: 298 ILKKAVDDLGVEVFEPLIRTY 318
K V+ + ++ P + TY
Sbjct: 445 ---KEVNKMKLKGVSPSVETY 462
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE +L + L + + +N+++ Y + G I+ M+ + PD YN
Sbjct: 371 EKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R + ++ AE+ + +MK G V+ T++ L Y F+K LKE+E+
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKG-VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ +Y LI + L E + R + + Y +I + + A
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ KE ++ N +I + G+L AE+L R+G P+ T+ Y
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
G+++ + E+ +G
Sbjct: 610 GFAGNVQRCIALYEEMKRSG 629
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 5/214 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE LL ++ L +NSL++ Y G+ ++ A+ +EMK S I P TY++ +
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+L I ER+ EM + D ++ + Y G EKA K++ ++
Sbjct: 642 -SLCTKEGIELTERLFGEMS----LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D + Y LI + G L EV + + +Y +++ +KD A
Sbjct: 697 GLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYV 756
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 217
++E + D+ + N ++ +E R + AE
Sbjct: 757 WYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 91/234 (38%), Gaps = 44/234 (18%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
++ +L+K ELNL + +N+L+ + TG + ++ E+ + PD +TYN +
Sbjct: 552 SKEMLKKGIELNL----VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
++ + EEMKR G + T+ L S+ + G+ E ER E+ +
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSG-IKPTLKTYHLLISLCTKEGI-ELTERLFGEM---SLK 662
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y ++ Y G++ + + + + MI+ + L
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQK---------------QMIEKSIGL--------- 698
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
D N +I K G+L L + R +P A T+ I
Sbjct: 699 -----------DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L ++M E ++G +NSL+ K G ++ ++I EM A + P++ TYN+
Sbjct: 682 EKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
++ V D A EM+ G + D + L S E ++AE + E+ R
Sbjct: 742 VKGHCEVKDYMSAYVWYREMQEKGFL-LDVCIGNELVSGLKEEWRSKEAEIVISEMNGRM 800
Query: 122 ----NAHRDLSAYQFL 133
DLSA + L
Sbjct: 801 LGDVTVDEDLSATEKL 816
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 135/314 (42%), Gaps = 11/314 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L+E+M+ L + +N ++ L KTG + +++EM + I PD Y +
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ ++S A R+ +EM++ +++ D+ T++ + + G +A++ E+ + D
Sbjct: 270 KLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGAEKCFK 186
Y LI Y + G + E + + + L T NI +Y + L ++ A +
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQM-LQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E +I N ++ K G ++ A +L + G P+A T+ D Y ++
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE-ILKKAVDD 305
+M A + L + +D + P+ T M F ++ E L+ +L+K +
Sbjct: 448 EMVRAHELLRQMLDR------ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMP 501
Query: 306 LGVEVFEPLIRTYA 319
+ LI+ Y
Sbjct: 502 -NATTYNSLIKQYC 514
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 9/263 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A LL +M L + +NSL+ K G+ ++ ++++M+ + PD+ TY
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A ++ A ++ +M D + TF+ L + + +G+ E E+ LK + +
Sbjct: 439 LMDAYCKSREMVRAHELLRQM-LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK 497
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFP--NTANISYLNMIQVLVNLKD 177
+ + Y LI Y N+ I+R + + P NT NI +I+ ++
Sbjct: 498 GIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI----LIKGHCKARN 553
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ A ++ + N +I + K + A EL E+ RR G + + + I
Sbjct: 554 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 613
Query: 238 FSDYYLRNGDMKLAVDCLEKAID 260
F+D G M+L ++ ++AI+
Sbjct: 614 FADINYDEGKMELTLELCDEAIE 636
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 118/288 (40%), Gaps = 13/288 (4%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 97
E + +I+EM+ + P+ YTYN + L ++ AERV+ EM +G +A D ++
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG-IAPDGVIYTT 263
Query: 98 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF 157
L + + G A R E++ R D Y +I QTG + E +++ +
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
Query: 158 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 217
++Y +I + A + T +I + K G ++ A
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 218 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 277
EL R+G + N T+ + + G++ AV ++ G + P + T
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG------FHPDAVTYT 437
Query: 278 TFMRHFEQEKDVDGAEGFLEILKKAVD---DLGVEVFEPLIRTYAAAG 322
T M + + +++ A E+L++ +D V F L+ + +G
Sbjct: 438 TLMDAYCKSREMVRAH---ELLRQMLDRELQPTVVTFNVLMNGFCMSG 482
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/277 (18%), Positives = 109/277 (39%), Gaps = 35/277 (12%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE +L +M + + + +L+ + K G+ + EM+ I PD TY +
Sbjct: 241 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 300
Query: 64 RALAAVNDISGAERVIEEM--KR------------DGR--------------------VA 89
L + A+++ EM KR DG +
Sbjct: 301 CGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLT 360
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
+ T++ LA + G + A L E+ + ++ Y L+ + GN+ + ++
Sbjct: 361 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 420
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
+ + +A + ++Y ++ +++ A + ++ + NV++ +
Sbjct: 421 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCM 480
Query: 210 EGRLENAEELKERARRRGADPNAKTW-EIFSDYYLRN 245
G LE+ E+L + +G PNA T+ + Y +RN
Sbjct: 481 SGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRN 517
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 137/319 (42%), Gaps = 11/319 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++ L+E+M+ L + +N ++ L KTG + +++EM + I PD Y
Sbjct: 305 QRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++S A R+ +EM++ +++ D+ T++ + + G +A++ E+ +
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGA 181
D Y LI Y + G + E + + + L T NI +Y + L ++ A
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQM-LQMGLTPNIVTYTALADGLCKCGEVDTA 482
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E +I N ++ K G ++ A +L + G P+A T+ D
Sbjct: 483 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 542
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE-ILK 300
Y ++ +M A + L + +D + P+ T M F ++ E L+ +L+
Sbjct: 543 YCKSREMVRAHELLRQMLDR------ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE 596
Query: 301 KAVDDLGVEVFEPLIRTYA 319
K + + LI+ Y
Sbjct: 597 KGIMP-NATTYNSLIKQYC 614
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 135/322 (41%), Gaps = 13/322 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL +M+ + +++++ Y + G +++ +I+EM+ + P+ YTYN +
Sbjct: 271 EAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVI 330
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L ++ AERV+ EM +G +A D ++ L + + G A R E++ R
Sbjct: 331 LLLCKTGKVAEAERVLREMISEG-IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKI 389
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y +I QTG + E +++ + ++Y +I + A
Sbjct: 390 SPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFS 449
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ T +I + K G ++ A EL R+G + N T+ +
Sbjct: 450 LHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLC 509
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ G++ AV ++ G + P + T T M + + +++ A E+L++ +
Sbjct: 510 KAGNIDQAVKLMKDMEVAG------FHPDAVTYTTLMDAYCKSREMVRAH---ELLRQML 560
Query: 304 D---DLGVEVFEPLIRTYAAAG 322
D V F L+ + +G
Sbjct: 561 DRELQPTVVTFNVLMNGFCMSG 582
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 9/263 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A LL +M L + +NSL+ K G+ ++ ++++M+ + PD+ TY
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A ++ A ++ +M D + TF+ L + + +G+ E E+ LK + +
Sbjct: 539 LMDAYCKSREMVRAHELLRQM-LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK 597
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFP--NTANISYLNMIQVLVNLKD 177
+ + Y LI Y N+ I+R + + P NT NI +I+ ++
Sbjct: 598 GIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI----LIKGHCKARN 653
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ A ++ + N +I + K + A EL E+ RR G + + + I
Sbjct: 654 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 713
Query: 238 FSDYYLRNGDMKLAVDCLEKAID 260
F+D G M+L ++ ++AI+
Sbjct: 714 FADINYDEGKMELTLELCDEAIE 736
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 112/249 (44%), Gaps = 1/249 (0%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
E+ + +++ +N + + G + ++ +M+ +PD +Y+ + V ++
Sbjct: 246 EVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQ 305
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
++IEEM+ G + + T++ + + + G +AER L+E+ + D Y L
Sbjct: 306 RVLKLIEEMQIKG-LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 193
I + + GN+S YR++ ++ + I+Y +I L + A+K F E
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 424
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
D +I Y KEG+++ A L + + G PN T+ +D + G++ A +
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484
Query: 254 CLEKAIDTG 262
L + G
Sbjct: 485 LLHEMCRKG 493
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 115/281 (40%), Gaps = 37/281 (13%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A + + ++ G + ++++++ Y ++G + + Q MK + P+ TYN
Sbjct: 215 VEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNT 274
Query: 62 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A D+ A + EEM+++G V D TF++L ++ L+E ++R E++
Sbjct: 275 IIDACGKGGVDLKKALDIFEEMQKEG-VEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQR 333
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTAN---------------- 162
R +D+ Y LI + G + I S+RL PN
Sbjct: 334 RGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEE 393
Query: 163 -----------------ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+SY +I + L A K+ E D+ N +I
Sbjct: 394 AIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALID 453
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
AY K+G+ ++A L ++ + G PN T+ D Y + G
Sbjct: 454 AYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAG 494
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 9/258 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E ++ + +M+ + +N+L+ K G E +I+ M+ +I P+ TY+
Sbjct: 322 EDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTM 381
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + +MK G V D +++ L IY + G F+ A A K++E
Sbjct: 382 IDGYGKLGCFEEAIGLYHDMKESG-VRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI YG+ G + ++ ++ PN ++Y +I
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNV--LTYSALIDAYSKAGMHQD 498
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F E++ D+ + + +I + K G +E+A L + + G PN T+ D
Sbjct: 499 ATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLID 558
Query: 241 YYLRNGDMKLAVDCLEKA 258
Y RNG VD +E A
Sbjct: 559 AYGRNGQ----VDNVEAA 572
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 47/335 (14%)
Query: 17 LGFSSMPFNSLMTLYAKTGHP----EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 72
L SM NS L K H E P +++E+ W RAL
Sbjct: 138 LSAPSMSGNSTALLLEKWSHQLVGLEDFPYLLRELG---------NRGEWERALQGY--- 185
Query: 73 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEA-GLFEKAERALKELENRNAH----RDL 127
E M + G + ++W S LASI + G K E AL ++ NR ++
Sbjct: 186 -------EWMVQQGHLRSEW---SKLASIMISTLGRLGKVEIAL-DVFNRAQKAGFGNNV 234
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK-DLPGAEKCFK 186
AY +++ YG++G E +++++++ A I+Y +I DL A F+
Sbjct: 235 YAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFE 294
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E + D N +I ++ E+++ + +RRG + + T+ D + G
Sbjct: 295 EMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGG 354
Query: 247 DMKLAVDCLE----KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
M+LA + K I P+ T T + + + + A G +K++
Sbjct: 355 QMELAASIMSSMRLKNIS----------PNVVTYSTMIDGYGKLGCFEEAIGLYHDMKES 404
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ LI YA GR + ME+V
Sbjct: 405 GVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERV 439
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L++MKE + +NSL+ +K ++ + + EM + + P+++TY ++
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ + A++ ++EM+ G V + + L + Y + G +A A + + ++ D
Sbjct: 534 EASEFASADKYVKEMRECG-VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+ + + + I+R +R SY +I L ++ A F E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
T ++ + N+++G + + G +E A+EL + +G PNA T+ D Y ++GD
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 248 M 248
+
Sbjct: 713 L 713
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 143/357 (40%), Gaps = 59/357 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA+AL + M L + + SL+ Y + + + ++ EMK +I+ YTY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + + D+ GA +++EM G + ++ L +++ F A R LKE++ +
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 123 AHRDLSAYQFLITLYGQTGNLSE-----VYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
D+ Y LI + + E V + L+ PN +Y I + +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK---PNA--FTYGAFISGYIEASE 537
Query: 178 LPGAEKCFKEW-ESG------------------------CATY----------DIRVTNV 202
A+K KE E G C+ Y D + V
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++ K ++++AEE+ R +G P+ ++ + + + + G+M+ A ++ ++ G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
P+ + F + +++ A K+ +D++ V+ P TY
Sbjct: 658 ------LTPNVIIYNMLLGGFCRSGEIEKA-------KELLDEMSVKGLHPNAVTYC 701
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 98/254 (38%), Gaps = 41/254 (16%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ AE + +M+ + + L+ ++K G+ +K +I EM + P+ YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +I A+ +++EM G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKG----------------------------------- 692
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
H + Y +I Y ++G+L+E +R++ ++L + Y ++ L D+ A
Sbjct: 693 -LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER----ARRRGADPNAKTWEI 237
F + GCA+ N +I K G+ E E+ R + R PN T+ I
Sbjct: 752 ITIFGTNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 238 FSDYYLRNGDMKLA 251
DY + G+++ A
Sbjct: 811 MIDYLCKEGNLEAA 824
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 126/301 (41%), Gaps = 11/301 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA ++ ++M E L + + +N L+ + ++G EK ++ EM + P++ TY
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--EN 120
+ D++ A R+ +EMK G V D ++ L ERA+
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLV-PDSFVYTTLVD---GCCRLNDVERAITIFGTNK 759
Query: 121 RNAHRDLSAYQFLITL---YGQTGNLSEVY-RIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ + + LI +G+T +EV R+ F +++Y MI L
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+L A++ F + ++ + ++ Y K GR + + A G +P+ +
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ + +L+ G A+ +++ D G + S T R + F + +++ AE +
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL-SISTCRALLSGFAKVGEMEVAEKVM 938
Query: 297 E 297
E
Sbjct: 939 E 939
>gi|449530158|ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA ++E MK+ +G S F +++ YA E + +++ P TY
Sbjct: 347 EKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASA 406
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A V S AE + EM+ G +S+L S+Y + G + A R L +++ +
Sbjct: 407 INAYCRVGLYSKAEDIFGEMEEKG-FDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKG 465
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ Y L+ ++G+ NL +V ++W+ ++ +SY ++I V + E
Sbjct: 466 CQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCE 525
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ ++E+ T D +M+G ++K R++ +L
Sbjct: 526 QYYREFRMNGGTIDKAFGGIMVGVFSKTSRVDELVKL 562
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 1/231 (0%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
FS+ + L AK+G + ++M+ I D Y+ + A++ ++ AE +
Sbjct: 258 FSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDL 317
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
E K ++ D F L +YV+ G EKA ++ +++ + ++ Y
Sbjct: 318 YNEAKAK-KLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYA 376
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+++ L ++Y + I + AE F E E +
Sbjct: 377 TRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVV 436
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
+ +I Y K GRL++A L + + +G PN + I + + + ++K
Sbjct: 437 AYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLK 487
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 109/266 (40%), Gaps = 6/266 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA--SSIMPDSY- 57
M + + +++K + S + +M Y K G E++ + E+++ S P S
Sbjct: 202 MHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISDSTPFSTK 261
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
Y + +LA + + +M++ G +A D+T +S L + + AE E
Sbjct: 262 IYGILCESLAKSGRVFESLEFFRDMRKKG-IAEDYTIYSALICTFASIQEVKLAEDLYNE 320
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ + RD + + LI +Y Q G+L + I ++ ++ + ++ +
Sbjct: 321 AKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRG 380
Query: 178 LPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A K +++ E GC + + I AY + G AE++ +G D +
Sbjct: 381 YEAAVKVYEKLIEDGCEPGQVTYASA-INAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYS 439
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTG 262
Y + G +K A+ L K + G
Sbjct: 440 SLISMYGKTGRLKDAMRLLAKMKEKG 465
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 115/256 (44%), Gaps = 5/256 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE +LE + L +++ +N+L+ Y + I ++MK+ I PD TYN +
Sbjct: 174 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 233
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + ++ AE ++ EM++ G V TF+ L Y AG EK L +++ +
Sbjct: 234 NGLCKLEMVTKAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 292
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ ++ ++ + + G + E I + + PN Y ++I + D A
Sbjct: 293 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ--VYNSIIDAYIESGDTEQA 350
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ ++ + I N+++ + +++ AEEL R +G P+ ++
Sbjct: 351 FLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 410
Query: 242 YLRNGDMKLAVDCLEK 257
GD A++ L++
Sbjct: 411 CCNKGDTDKALELLQE 426
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KAE L+ +M++ + S FN+L+ Y G EK ++ +M+ I D ++
Sbjct: 241 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 300
Query: 61 VWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
++A I A ++++M +D VA + ++++ Y+E+G E+A +++++
Sbjct: 301 SVVKAFCKNGKIPEAVAILDDMIYKD--VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 358
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N + Y L+ ++ + E + +LR +SY +I N D
Sbjct: 359 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 418
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + +E +R + ++ A A GR+ + E L ++ + +P++ + I
Sbjct: 419 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 478
Query: 240 DYYLR-NGDMKLA 251
D Y+R D K+A
Sbjct: 479 DAYVRCENDSKVA 491
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 1/236 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L++ + G ++ ++ EM + S+ PD +TY++ L + + E
Sbjct: 89 YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESL 148
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G + +T S L + + G KAE+ L+ L + Y LI Y Q +L
Sbjct: 149 KKGVMLGAYTC-SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 207
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ I+ ++ +I+Y +I L L+ + AE E E + N +
Sbjct: 208 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 267
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
I AY G+LE + +++G + ++ + +NG + AV L+ I
Sbjct: 268 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 323
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+ K G K +++ + + ++P + YN + V D+ GA + E+MK
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR- 220
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
+ D T++ L + + + KAE + E+E + + LI YG G L +
Sbjct: 221 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 280
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
+ + ++ + IS+ ++++ A
Sbjct: 281 FTVLSDMQQKGIKSDVISFGSVVK-----------------------------------A 305
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ K G++ A + + + PNA+ + D Y+ +GD + A +EK ++G
Sbjct: 306 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG 361
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+A L+EKMK + S + +N L+ ++ ++ +I ++ + PD +YN
Sbjct: 347 TEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 406
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A D A +++EM + G + T+ L S AG E +++ ++
Sbjct: 407 IISACCNKGDTDKALELLQEMNKYG-IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 465
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---LAFPNT 160
N S Y ++ Y + N S+V + + + +AF +T
Sbjct: 466 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 507
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 105/272 (38%), Gaps = 11/272 (4%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD+++YNV + L S A +V +EM G V +W T++ + +V+ G E R
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMG-VVPNWITYNTMIDGHVKGGDLEAGFR 72
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 171
++ + ++ Y L++ + G + E + + FP+ +Y +
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD--GFTYSILFDG 130
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
L + F E ++++ K+G++ AE++ E G P
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
+ + Y + D++ A E+ P T + + + V
Sbjct: 191 TVIYNTLINGYCQVRDLRGAFCIFEQM------KSRHIRPDHITYNALINGLCKLEMVTK 244
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
AE + ++K+ D VE F LI Y AG+
Sbjct: 245 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 276
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 19/264 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK L +++E + + +N+L++ Y+ G E+ ++ M P YTYN
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ V EM R G ++ D TT+ +L + G + E+ ++ +R+
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL---------NMIQVLV 173
DL + +++L+ ++GNL + + S++ A N+ Y MI V +
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
NL++ + + GCA D+ N ++ K L A++L R P++
Sbjct: 431 NLRN--------EMLQQGCAM-DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEK 257
T I D + + G+++ A++ +K
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQK 505
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 3/237 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A+ L +M E L S L+ + K G+ + + Q+MK I D TYN
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ V DI A+ + +M + ++S L + G +A R E+ +
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+N + +I Y ++GN S+ + ISY +I V +++
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 181 AEKCFK--EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A K E E G D+ N ++ + ++ +++ AE + + RG +P+ T+
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 95/238 (39%), Gaps = 1/238 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+L+ + G E + QE+ S + + YT N+ + AL + + +++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V D T++ L S Y GL E+A + + + + Y +I + G
Sbjct: 264 KG-VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
++ + + + + +Y +++ D+ EK F + S D+ + M+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ + G L+ A + G P+ + I Y R G + +A++ + + G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 96/253 (37%), Gaps = 25/253 (9%)
Query: 70 NDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR------- 121
ND++ +R ++++ + S + I V +G A+ L + R
Sbjct: 90 NDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLE 149
Query: 122 ----------NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQ 170
N + S + LI Y Q L E + + LR + T +I N +I
Sbjct: 150 IVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLR-SKGFTVSIDACNALIG 208
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
LV + + A ++E ++ N+M+ A K+G++E + + +G P
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
+ T+ Y G M+ A + + G+G + I +H + E+
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAM--PGKGFSPGVYTYNTVINGLCKHGKYER--- 323
Query: 291 GAEGFLEILKKAV 303
E F E+L+ +
Sbjct: 324 AKEVFAEMLRSGL 336
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 6/231 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ G E+ ++ +M+ + P++ TYN + A ++ GAERV+ M+
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 214
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + TF+++ + +AG E A + E+ D+ +Y L++ Y + G L
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 274
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVT 200
E ++ + R P+ +++ ++I +L A + E G ++ T
Sbjct: 275 HESLAVFSEMTQRGLVPDV--VTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 332
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
+I + K+G L++A E R+ G P+ + + Y + G M LA
Sbjct: 333 -ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FNS++ K G E + EM + PD +YN + V + + V EM
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G V D TF++L +AG E+A + ++ R + + LI + + G L
Sbjct: 286 QRGLVP-DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFL 344
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ +R + + Y +I L + A + +E E+ D+ + +
Sbjct: 345 DDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTI 404
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTW 235
I Y K G L++A +L ++ ++G P+A T+
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 105/234 (44%), Gaps = 5/234 (2%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A+ +M + L + F SL+ K G+ E+ A++ +M+ + + T+ +
Sbjct: 279 AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGF 338
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A +EEM++ G + ++ L + Y + G + A ++E+E + D
Sbjct: 339 CKKGFLDDALLAVEEMRKCG-IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD 397
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y +I+ Y + GNL +++ + + + P+ I+Y ++I+ L K L A +
Sbjct: 398 VVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA--ITYSSLIRGLCEEKRLNDACEL 455
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
F+ D +I + KEG +E A L + R+G P+ T+ +
Sbjct: 456 FENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 110/260 (42%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + ++M L + +N+L++ Y K G + A+ EM ++PD T+
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A ++ +M+ G + + TF+ L + + G + A A++E+
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERG-LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 358
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI Y + G + + R + ++Y +I + +L A
Sbjct: 359 IQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAF 418
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ ++ D + +I +E RL +A EL E + G P+ T+ D +
Sbjct: 419 QLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGH 478
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G+++ A+ ++ I G
Sbjct: 479 CKEGNVEKALSLHDEMIRKG 498
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
+ M + P+ YTYN+ +RAL A + A V+ +M+ G A + T++ L + +
Sbjct: 139 FLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAG-CAPNAVTYNTLVAAF 197
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
AG + AER +++L + GN A PN
Sbjct: 198 CRAGELDGAER-------------------VVSLMREEGN-------------AKPNL-- 223
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+++ +M+ L + GA K F E D+ N ++ Y K G L + +
Sbjct: 224 VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
+RG P+ T+ + G+++ AV + + + G + T +
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG------LRMNEVTFTALIDG 337
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
F ++ +D A +E ++K V + LI Y GR
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L E M +L + + +L+ + K G+ EK ++ EM ++PD TY+V + L+
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLS 514
Query: 68 AVNDISGAERVIEEMKRDGRVA--------------ADWTTFSNLASIYVEAGLFEKAER 113
A R++ ++ + V A++ + L + GL ++A++
Sbjct: 515 KSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADK 574
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAF-PNTANISYLNMIQV 171
+ + +RN D S Y LI + + GN+ + + LR F PN+ S +++++
Sbjct: 575 VYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNST--STISLVRG 632
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
L + A+ ++ + C D + +I KEG
Sbjct: 633 LFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEG 672
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 19/318 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L++ M+ L+ SS +N L+T + G +K+ A+ EM+ IMP TYN
Sbjct: 297 ENAAKLVDSMR-LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAI 355
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+ EM+ G + D T++++ + Y +AG ++A L +L
Sbjct: 356 IHGLLKSEQVEAAQLKFAEMRAMG-LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAG 414
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y LI Y + G L E R+ + + FP+ +Y ++ +++LP
Sbjct: 415 LAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVC--TYTILMNGSHKVRNLPM 472
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F E S D N I A G A +L+E +G P+ T+ + D
Sbjct: 473 AREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIID 532
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ G++K A D K + G P T T + H E+ G L +
Sbjct: 533 GLCKTGNLKDAKDLKMKMVSDG------LQPDCITY-TCLIHAHCER------GLLSEAR 579
Query: 301 KAVDDLGVEVFEPLIRTY 318
K ++ + + +P + TY
Sbjct: 580 KLLNGMVSDGLQPSVVTY 597
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 9/250 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM--KASSIMPDSYTYN 60
+ A+ +M +L + + + +N+L+ + K G ++ +++EM + + + TYN
Sbjct: 225 DDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYN 284
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + LA + A ++++ M+ + A T++ L + +E G +K E E+EN
Sbjct: 285 VVISFLAREGHLENAAKLVDSMRLSKK--ASSFTYNPLITALLERGFVQKVEALQMEMEN 342
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
L Y +I ++ + + +R I+Y +M+ +L
Sbjct: 343 EGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKE 402
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + + N +I Y + G LE A LKE +G P+ T+ I
Sbjct: 403 ALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI--- 459
Query: 241 YYLRNGDMKL 250
L NG K+
Sbjct: 460 --LMNGSHKV 467
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 99/257 (38%), Gaps = 6/257 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A ++M L +N+ + G K + + M I PD+ TYNV +
Sbjct: 473 AREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIID 532
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L ++ A+ + +M DG + D T++ L + E GL +A + L + +
Sbjct: 533 GLCKTGNLKDAKDLKMKMVSDG-LQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQ 591
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y LI + GNL Y +R + I+Y +I L A
Sbjct: 592 PSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHH 651
Query: 185 FKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE-IFSDYY 242
F E E G A T ++I +EG +A L + G P+ T +F +
Sbjct: 652 FHEMLERGLAPNKYTYT-LLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF- 709
Query: 243 LRNGDMKLAVDCLEKAI 259
G M A++ LE +
Sbjct: 710 -DKGHMYHAIEYLENIV 725
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 94/255 (36%), Gaps = 1/255 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL ++ L + + +N+L+ Y + G E+ + +EM PD TY + M
Sbjct: 406 LLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSH 465
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
V ++ A +EM G + D ++ + G KA + + + + + D
Sbjct: 466 KVRNLPMAREFFDEMLSKG-LQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDT 524
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +TGNL + + + I+Y +I L A K
Sbjct: 525 VTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNG 584
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
S + ++I + G L +A + G +PN T+ + R G
Sbjct: 585 MVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGR 644
Query: 248 MKLAVDCLEKAIDTG 262
LA + ++ G
Sbjct: 645 TLLAYHHFHEMLERG 659
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 106/268 (39%), Gaps = 9/268 (3%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK-RDGRVAADWTTFS 96
+ + A+ +EM I P TYN + + A +++EM+ + G + T++
Sbjct: 225 DDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYN 284
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
+ S G E A + + + + Y LIT + G + +V + +
Sbjct: 285 VVISFLAREGHLENAAKLVDSMRLSKKASSFT-YNPLITALLERGFVQKVEALQMEMENE 343
Query: 157 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
++Y +I L+ + + A+ F E + D+ N M+ Y K G L+ A
Sbjct: 344 GIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEA 403
Query: 217 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 276
L RR G P T+ D Y R G ++ A E+ ++ G P T
Sbjct: 404 LWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQG------CFPDVCTY 457
Query: 277 RTFMRHFEQEKDVDGA-EGFLEILKKAV 303
M + +++ A E F E+L K +
Sbjct: 458 TILMNGSHKVRNLPMAREFFDEMLSKGL 485
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA ++E MK+ +G S F +++ YA E + +++ P TY
Sbjct: 347 EKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASA 406
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A V S AE + EM+ G +S+L S+Y + G + A R L +++ +
Sbjct: 407 INAYCRVGLYSKAEDIFGEMEEKG-FDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKG 465
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ Y L+ ++G+ NL +V ++W+ ++ +SY ++I V + E
Sbjct: 466 CQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCE 525
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ ++E+ T D +M+G ++K R++ +L
Sbjct: 526 QYYREFRMNGGTIDKAFGGIMVGVFSKTSRVDELVKL 562
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 1/231 (0%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
FS+ + L AK+G + ++M+ I D Y+ + A++ ++ AE +
Sbjct: 258 FSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDL 317
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
E K ++ D F L +YV+ G EKA ++ +++ + ++ Y
Sbjct: 318 YNEAKAK-KLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYA 376
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+++ L ++Y + I + AE F E E +
Sbjct: 377 TRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVV 436
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
+ +I Y K GRL++A L + + +G PN + I + + + ++K
Sbjct: 437 AYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLK 487
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 109/266 (40%), Gaps = 6/266 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT-- 58
M + + +++K + S + +M Y K G E++ + E+++ + ++
Sbjct: 202 MHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGDSERVMELFNEVESRISVSTPFSTK 261
Query: 59 -YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
Y + +LA + + +M++ G +A D+T +S L + + AE E
Sbjct: 262 IYGILCESLAKSGRVFESLEFFRDMRKKG-IAEDYTIYSALICTFASIQEVKLAEDLYNE 320
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ + RD + + LI +Y Q G+L + I ++ ++ + ++ +
Sbjct: 321 AKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRG 380
Query: 178 LPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A K +++ E GC + + I AY + G AE++ +G D +
Sbjct: 381 YEAAVKVYEKLIEDGCEPGQVTYASA-INAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYS 439
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTG 262
Y + G +K A+ L K + G
Sbjct: 440 SLISMYGKTGRLKDAMRLLAKMKEKG 465
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 24/329 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
E + LLE+MK + + + +N+++ A+ E + + EM+ + PD TYN
Sbjct: 200 ETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNT 259
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A AA AE V + M +G + + TT+S + + + G EK LKE+E+
Sbjct: 260 LLSACAARGLGDEAEMVFKTMI-EGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESE 318
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLP 179
D+S+Y LI + + G++ E +++ ++ A PN + S +L+NL
Sbjct: 319 GYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS------ILLNLYGKH 372
Query: 180 G----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
G + F + + A D N++I + + G + L DPN +T+
Sbjct: 373 GRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETY 432
Query: 236 E--IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
E +F+ G L D +K + G G VPSS+ + + Q D A
Sbjct: 433 EGLVFA-----CGKGGLHEDA-KKILFHMNGKG--IVPSSKAYSGLIEAYGQAALYDEAL 484
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ + ++ + LI T+A G
Sbjct: 485 VAFNTMNEVGSKSTIDTYNSLIHTFARGG 513
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 98/273 (35%), Gaps = 36/273 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ L+ LY K G + + + +MK SS PD+ TYN+ +R + ++
Sbjct: 362 YSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLV 421
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
D + + T+ L + GL E A++ L + + AY LI YGQ
Sbjct: 422 -DENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALY 480
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLV----------------------NLKDLPG- 180
E + ++ + +Y ++I N K G
Sbjct: 481 DEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
Query: 181 ------------AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
A K F E E D + ++G Y G ++ ++E + G
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGI 600
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
P+ + + Y +NG A + L++ I T
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDASELLDEMIKT 633
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 5/260 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L ++ E + ++ +NSL+ G +++ ++ +M ++ PD YT+N+ +
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
AL I A+ V+ M + G D T++ L Y +A + R
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE 332
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y LI Y +T + E +++ L + P A SY ++I L N + +
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA--SYNSLIDGLCNSGRISHVK 390
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K E D+ N++I A KEGR+ A + ++G PN T+ D Y
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGY 450
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
++ +A D + + +G
Sbjct: 451 CLRNNVNVAKDIFNRMVKSG 470
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 128/333 (38%), Gaps = 45/333 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A L +++ NL + +NSL+ +G + ++ EM S+ PD TYN
Sbjct: 350 MVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYN 409
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + AL I A V+ M + G V + T++ + Y A+ +
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMKKG-VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDL 178
D+ Y LI Y +T + E +++ +R P+ A SY ++I L NL +
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIA--SYNSLIDGLCNLGRI 526
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAK---------------EG------------ 211
P ++ E + D+ N+++ A+ K EG
Sbjct: 527 PHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIV 586
Query: 212 -------RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
+L+ AE+ + G PN +T+ I + ++G A+ L K D R
Sbjct: 587 DNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRP 646
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
P + T + Q + D AE E
Sbjct: 647 ------PDAITFEIIIGVLLQRNETDKAEKLRE 673
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 81/221 (36%), Gaps = 1/221 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+++ + G K Q + A + D +TY + L+ I A +++EM+
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ V + +S L + G A ++ R D Y LI G
Sbjct: 188 KSS-VQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
EV ++ + + + ++ +I L + A+ DI N +
Sbjct: 247 QEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNAL 306
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ Y + A EL R +RG +P+ + + D Y +
Sbjct: 307 MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCK 347
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A ++ + + + L S + FN+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 147 ARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLIN 206
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + I GA + +EM G V + TF+ L + + G + A K++ +++
Sbjct: 207 GLCKESKIDGANELFDEMLDKGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 265
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + +R+ I+Y +I DL A +
Sbjct: 266 ADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEH 325
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D V +I +EGR +AE++ G P+ T+ + + + +
Sbjct: 326 RKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCK 385
Query: 245 NGDM 248
GD+
Sbjct: 386 KGDV 389
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M +I A V + + + G + +F+ L + Y+ G ++ R
Sbjct: 129 YFFNILMHRFCKEGEIRVARSVFDAITKWG-LRPSVVSFNTLMNGYIRLGDLDEGFRLKS 187
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
+ D+ Y LI + + ++ + + PN +++ +I
Sbjct: 188 AMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPN--GVTFTTLIDGHCK 245
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ A+ L + R +G P+ T
Sbjct: 246 NGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKIT 305
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GD++ A +
Sbjct: 306 YTTLIDGCCKEGDLETAFE 324
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 108/254 (42%), Gaps = 17/254 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K EAL +MK N+ + +++ Y + G+ + ++ E + + P+ TY V +
Sbjct: 219 KVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLI 278
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + + AE ++ +M+ G V + F+ + Y G+ + A + +E
Sbjct: 279 KGFCKIGQMEAAEMLLADMQGQG-VGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGV 337
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ Y L + G PN ++Y +I + D+ A +
Sbjct: 338 ELNIYTYNTLACGLCRMG--------------VVPNY--VTYTTLISIHCKDGDMVEARR 381
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+E AT + +VMI YAK+GR+ AE ++ ++G P+ T+ +
Sbjct: 382 LFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHC 441
Query: 244 RNGDMKLAVDCLEK 257
NG + +A+ E+
Sbjct: 442 VNGKVDVALKLFEE 455
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 21/235 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LL M+ +G + + FN+++ Y + G + I M+ + + YTYN
Sbjct: 288 EAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTL 347
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L + V ++ T++ L SI+ + G +A R +E+ +
Sbjct: 348 ACGLCRMG-----------------VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 390
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
A + Y +I Y + G + E R + + + P+ +Y +++ +
Sbjct: 391 ATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDV--YTYASLVHGHCVNGKVDV 448
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A K F+E + ++ +I AKEGR E A +L + + G P+ +
Sbjct: 449 ALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLY 503
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 127/342 (37%), Gaps = 26/342 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A LL+ M + +++ +NSL+ Y + ++ I++ M+ I TY +
Sbjct: 147 VDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTI 206
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L+ DIS E + EMK + V D ++ + + Y AG +A + L E
Sbjct: 207 LVDSLSTARDISKVEALFNEMKAN-NVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGN 265
Query: 122 NAHRDLSAYQFLITLYGQTGN-------LSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
+ Y LI + + G L+++ L NT Y V
Sbjct: 266 GVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDA 325
Query: 175 LKDLPGAEKCFKEWES------GCATYDIRVT------NVMIGAYAKEGRLENAEELKER 222
LK EK E C + V +I + K+G + A L
Sbjct: 326 LKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFRE 385
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
+GA P+ T+ + Y + G ++ A ++ G +VP T + +
Sbjct: 386 MAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKG------FVPDVYTYASLVHG 439
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
VD A E +K+ + V + LI A GR+
Sbjct: 440 HCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRS 481
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 86/210 (40%), Gaps = 14/210 (6%)
Query: 48 KASSIMPDSYTYNVW-MRALAAVNDISGA-ERVIEEMKRDGRVAADWTTFSNLASIYVE- 104
+ S+ P S T+++ +R + D +G ER + G + F+ AS+ V+
Sbjct: 89 RLGSLDPRSLTFSLLSLRRAGRLADAAGLLERAL------GSCPGSVSPFA--ASVVVDG 140
Query: 105 ---AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+G + A R L ++ + Y L+ Y + + V I +
Sbjct: 141 LCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEAT 200
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+Y ++ L +D+ E F E ++ D+ + +I AY + G + A ++ +
Sbjct: 201 VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLD 260
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
G +PN +T+ + + + G M+ A
Sbjct: 261 ECVGNGVEPNERTYGVLIKGFCKIGQMEAA 290
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L+ ++ + S+ + +++ + A G E+ IQ+MKA P+ Y Y+ +
Sbjct: 221 KAVELIGELPHNGIQMDSVMYGTVLAICASNGRCEEAENFIQQMKAEGHSPNIYHYSSLL 280
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + D A+ ++ EMK G V + + L +Y++ GLF+++ L ELE+
Sbjct: 281 NSYSWKGDYKKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 339
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y L+ + G L E I+ ++ + + MI L K A++
Sbjct: 340 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVKSDGYANSIMISALCRSKRFEEAKE 399
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
++ E+ D+ + N M+ AY + G +E+ + ++ + P+ T+ I Y++
Sbjct: 400 LSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAIIPDYNTFHILIKYFI 459
Query: 244 R 244
+
Sbjct: 460 K 460
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 108/300 (36%), Gaps = 45/300 (15%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISGAERVIEEMK 83
NS+++ K G + + +MK + PD TYN + V N A +I E+
Sbjct: 171 NSILSCLVKNGKLDSCIKLFDQMKRGGLKPDVITYNTLLAGCIKVKNGYPKAVELIGELP 230
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + D + + +I G E+AE +++++ ++ Y L+ Y G+
Sbjct: 231 HNG-IQMDSVMYGTVLAICASNGRCEEAENFIQQMKAEGHSPNIYHYSSLLNSYSWKGDY 289
Query: 144 ---SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD----------------------- 177
E+ +S+ L PN ++ L + + L D
Sbjct: 290 KKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCM 348
Query: 178 ----------LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
L A F + + D ++MI A + R E A+EL +
Sbjct: 349 LMDGLSKAGKLEEARSIFDDMKGKGVKSDGYANSIMISALCRSKRFEEAKELSRDSETTY 408
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
+ Y R G+M+ + ++K D +P T +++F +EK
Sbjct: 409 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKM------DEQAIIPDYNTFHILIKYFIKEK 462
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA+ L+ +MK + L + + +L+ +Y K G ++ ++ E++++ + Y +
Sbjct: 290 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 349
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L+ + A + ++MK G V +D S + S + FE+A+ ++ E
Sbjct: 350 MDGLSKAGKLEEARSIFDDMKGKG-VKSDGYANSIMISALCRSKRFEEAKELSRDSETTY 408
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
DL ++ Y + G + V R+ + +
Sbjct: 409 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKM 439
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 125/263 (47%), Gaps = 6/263 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNV 61
E A KM+E + ++ +N+L+ Y G PE+ +++ M + ++ P+ TYNV
Sbjct: 100 ESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNV 159
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+RA I+ A V+ +M G + D T++ +A+ Y + G ++AE + E++N
Sbjct: 160 LVRAWCNKKRITEAWNVVYKMIASG-IQPDVVTYNTIATAYAQKGALDQAEGVILEMQNN 218
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRI-WRSLRLAF-PNTANISYLNMIQVLVNLKDLP 179
+ +++ Y + G + E R +R L PN + + ++I+ V + D
Sbjct: 219 GVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNL--VIFNSLIKGFVAIMDRD 276
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G ++ E D+ + ++ A++ G +E E+ + + G +P+A + I +
Sbjct: 277 GVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILA 336
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
Y+R + + A + L I +G
Sbjct: 337 KGYVRAQEPEKAEELLTTMIKSG 359
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 119/298 (39%), Gaps = 10/298 (3%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
LM + G P++ +I + P +Y + AL +I +++ +G
Sbjct: 19 LMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENG 78
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
+ D F+ + + + E+G E A +++ S Y LI YG G E
Sbjct: 79 -MNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEES 137
Query: 147 YRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVMI 204
++ + N+ +Y +++ N K + A +K SG D+ N +
Sbjct: 138 VKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQP-DVVTYNTIA 196
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
AYA++G L+ AE + + G PN +T I Y + G ++ A+ + + G
Sbjct: 197 TAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIH 256
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P+ + ++ F D DG + L ++++ V F ++ ++ AG
Sbjct: 257 ------PNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAG 308
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 88/234 (37%), Gaps = 36/234 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE ++ +M+ + + +M+ Y K G + MK I P+ +N
Sbjct: 206 DQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSL 265
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ A+ D G + V+ M+ G V D TFS + + + AG EK ++
Sbjct: 266 IKGFVAIMDRDGVDEVLNLMEEFG-VKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAG 324
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY L Y +R P A MI+
Sbjct: 325 IEPDAHAYSILAKGY---------------VRAQEPEKAEELLTTMIK------------ 357
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
SG ++ + +I + G+++ A + ++ +RG PN KT+E
Sbjct: 358 -------SGFQP-NVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFE 403
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L M+E + + F+++M ++ G EK I +M + I PD++ Y++ +
Sbjct: 281 VLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYV 340
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ AE ++ M + G + F+ + S + AG + A R ++ R +L
Sbjct: 341 RAQEPEKAEELLTTMIKSG-FQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNL 399
Query: 128 SAYQFLI 134
++ LI
Sbjct: 400 KTFETLI 406
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 126/286 (44%), Gaps = 7/286 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +L++M L +++ +N L++ K + + +M + PD +T+N
Sbjct: 441 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 500
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L VN A + ++M +G V A+ T++ L ++ G ++A + + ++ R
Sbjct: 501 IFGLCKVNKFEEALGLYQDMLLEG-VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI + GN+ + ++ + N NIS +I L ++ A
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ ++ T DI N +I K GR + A L ++ + G P+A T+ ++
Sbjct: 620 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 679
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+ G A L + +D+G ++P+ T + +F +E D
Sbjct: 680 CKEGMFDDAHLLLSRGVDSG------FIPNEVTWYILVSNFIKEGD 719
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 43/277 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N ++ + P+ +P + EM + I P YT+ V M+AL VN++ A ++++M
Sbjct: 185 YNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMT 244
Query: 84 RDGRVA----------------------------------ADWTTFSNLASIYVEAGLFE 109
R G V D TF++ +
Sbjct: 245 RHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIH 304
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
+A + + + R + Y L+ + G + E R L PN + + +I
Sbjct: 305 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTLI 360
Query: 170 QVLVNLKDLPGAEKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
V+ L A+ E GC DI N +I K+G L +A EL + +G
Sbjct: 361 NGYVSRGRLDEAKAVMHESMLSVGCGP-DIFTYNTLILGLCKKGYLVSARELMNEMQIKG 419
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
+PN T+ I D + + G ++ A + L++ +G+G
Sbjct: 420 CEPNVITYTILIDRFCKEGRLEEARNVLDEM--SGKG 454
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 103/263 (39%), Gaps = 3/263 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E + E M + G +N+L+ K G+ ++ EM+ P+ TY
Sbjct: 369 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 428
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A V++EM G +A + ++ L S + + A ++ +
Sbjct: 429 ILIDRFCKEGRLEEARNVLDEMSGKG-LALNAVGYNCLISALCKDEKVQDALNMFGDMSS 487
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ + LI + E +++ + L I+Y +I + +
Sbjct: 488 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 547
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A K + GC DI N +I A + G +E L E +G +PN + I
Sbjct: 548 ALKLVNDMLFRGCPLDDI-TYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 606
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
+ R G+++ A++ L I G
Sbjct: 607 NGLCRTGNIQHALEFLRDMIHRG 629
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 156/355 (43%), Gaps = 19/355 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA LL +M E L + + +N+L+ Y K G E +++ M++ ++ P++ TYN
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNEL 434
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ N + A V+ +M + +V D T+++L +G F+ A R L + +R
Sbjct: 435 IKGYCKRN-VHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y +I ++ + E ++ SL + PN + Y +I +
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNV--VMYTALIDGYCKAGKVNE 550
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A ++ S + N +I +G+L+ A L+E+ + P T I
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIH 610
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
L++GD A ++ + +G P + T TF++ + +E + AE + +K
Sbjct: 611 RLLKDGDFDHAYRRFQQMLSSGTK------PDAHTYTTFIQTYCREGRLQDAEDMVAKMK 664
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSP--VMLRRLKMEKVEVSEAS-----KKLLE 348
+ + + LI+ Y GRT+ V+L+R+ E S+ + K LLE
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE 719
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 141/353 (39%), Gaps = 46/353 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E A ++E M+ NL ++ +N L+ Y K + K ++ +M ++PD TYN
Sbjct: 408 MIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A R++ M G V WT S + S+ ++ E+A LE
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSL-CKSKRVEEACDLFDSLEQ 525
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLN----------- 167
++ ++ Y LI Y + G ++E + + + + PN+ + L
Sbjct: 526 KDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKE 585
Query: 168 ----------------------MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+I L+ D A + F++ S D I
Sbjct: 586 ATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
Y +EGRL++AE++ + + G P+ T+ Y G A L++ DTG
Sbjct: 646 TYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTG--- 702
Query: 266 GGKWVPSSETIRTFMRHFEQEK--DVDGAEGFLEILKKAVD-DLGVEVFEPLI 315
PS T + ++H + K V G E + ++ ++ D+ VE+ E ++
Sbjct: 703 ---CEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMV 752
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 13/239 (5%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ A+ G +++ + EM + P+ YTYN + V ++ A + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D+ T+++L Y + + A + KE+ + R+ AY LI L
Sbjct: 246 EAG-LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLI------HGL 298
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK------CFKEWESGCATYDI 197
RI ++ L + Y + V +K L G+E+ KE E +I
Sbjct: 299 CVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNI 358
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
V+I + + +LE A EL + +G PN T+ + Y + G ++ A+D +E
Sbjct: 359 HTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVE 417
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 138/304 (45%), Gaps = 16/304 (5%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +L++ + K G+ ++ + +M SS++P+ T+NV + V ++ A ++ ++M
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMV 537
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG--QTG 141
G ++T S ++ + + G KA+ + +LEN L+++ +YG + G
Sbjct: 538 DRGLTPDNYTYRSLISVLCLTLGAM-KAKEFVDDLENNCV--VLNSFSLTTLMYGFCKEG 594
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
L+E Y IW +R IS+ ++ + L D F+E + D
Sbjct: 595 RLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHT 654
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA-VDCLEKAID 260
MI ++KE + A ++ G PN T+ + ++ ++G + A + C E +
Sbjct: 655 CMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLV- 713
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF-LEILKKAVDDLGVEVFEPLIRTYA 319
G+++P+S T F+ E +++ A+ IL+ + + F LI+ +
Sbjct: 714 ------GRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLAN--TVTFNTLIKGFC 765
Query: 320 AAGR 323
AG+
Sbjct: 766 KAGQ 769
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 119/250 (47%), Gaps = 5/250 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A + ++M+E + + P+NSL+ Y + + + ++ EM + P + +Y+
Sbjct: 385 MMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYS 444
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L D++ A + EM R+G V+ + TF+ L S + + G ++A R ++ +
Sbjct: 445 PLIAGLCRKGDLASAMELHREMARNG-VSGNVYTFTTLISGFCKDGNMDEAARLFDKMID 503
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + + +I Y + GN+ + ++++ + N +Y ++I VL
Sbjct: 504 SSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMK 563
Query: 181 AEKCFKEWESGCATYD-IRVTNVMIGAYAKEGRLENAEELKERARRRGA--DPNAKTWEI 237
A++ + E+ C + +T +M G + KEGRL + + R RG D + T +
Sbjct: 564 AKEFVDDLENNCVVLNSFSLTTLMYG-FCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622
Query: 238 FSDYYLRNGD 247
++ L +G+
Sbjct: 623 YAALKLHDGE 632
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 95/248 (38%), Gaps = 7/248 (2%)
Query: 33 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 92
K GH +K + + ++P+ + N + L AER+ M G + +
Sbjct: 312 KRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRG-LEPNE 370
Query: 93 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
T++ L + G+ + A + + + Y LI Y Q N + +
Sbjct: 371 VTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNE 430
Query: 153 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
+ + SY +I L DL A + +E + ++ +I + K+G
Sbjct: 431 MVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGN 490
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 272
++ A L ++ PN T+ + + Y R G+++ A ++ +D G P
Sbjct: 491 MDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG------LTPD 544
Query: 273 SETIRTFM 280
+ T R+ +
Sbjct: 545 NYTYRSLI 552
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ L+ K+G+ + +EM +P+S+TYN ++ LA ++ A +V+
Sbjct: 688 YTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATI 746
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G A+ TF+ L + +AG + A ++ D +Y +I + G++
Sbjct: 747 LEG-CLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDI 805
Query: 144 SEVYRIWRSL 153
++ +++W +
Sbjct: 806 NKAFQLWNEM 815
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 100/250 (40%), Gaps = 6/250 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ ++ ++ + +S +LM + K G + I EM+A + D ++ V +
Sbjct: 563 KAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A ++D + EMK G V D + + ++ + +A ++
Sbjct: 623 YAALKLHDGEKISVLFREMKEKG-VKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGC 681
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGA 181
++ Y LI ++G LS + + + PN+ +Y + L N +L A
Sbjct: 682 SPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNS--FTYNCFLDFLANEGELEKA 739
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ GC + N +I + K G+++ A +L + G P+ ++ +
Sbjct: 740 KVLHATILEGCLANTVTF-NTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINE 798
Query: 242 YLRNGDMKLA 251
+ GD+ A
Sbjct: 799 LCKVGDINKA 808
>gi|145335386|ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated salt-inducible protein isolog [Arabidopsis
thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L+ ++ + S+ + +++ + A G E+ IQ+MK P+ Y Y+ +
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + D A+ ++ EMK G V + + L +Y++ GLF+++ L ELE+
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y L+ + G L E I+ ++ + + MI L K A++
Sbjct: 339 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE 398
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
++ E+ D+ + N M+ AY + G +E+ + ++ + P+ T+ I Y++
Sbjct: 399 LSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFI 458
Query: 244 R 244
+
Sbjct: 459 K 459
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 10/209 (4%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISGAERVIEEMK 83
NS+++ K G + + +MK + PD TYN + V N A +I E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + D + + +I G E+AE +++++ ++ Y L+ Y G+
Sbjct: 230 HNG-IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 144 ---SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRV 199
E+ +S+ L PN ++ L + + L D + + E ES G A ++
Sbjct: 289 KKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFD--RSRELLSELESAGYAENEMPY 345
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGA 228
+M G +K G+LE A + + + +G
Sbjct: 346 CMLMDG-LSKAGKLEEARSIFDDMKGKGV 373
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA+ L+ +MK + L + + +L+ +Y K G ++ ++ E++++ + Y +
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 348
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L+ + A + ++MK G V +D S + S + F++A+ ++ E
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKG-VRSDGYANSIMISALCRSKRFKEAKELSRDSETTY 407
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
DL ++ Y + G + V R+ + +
Sbjct: 408 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKM 438
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 24/329 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
E + LLE+MK + + + +N+++ A+ E + + EM+ + PD TYN
Sbjct: 200 ETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNT 259
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A AA AE V + M +G + + TT+S + + + G EK LKE+E+
Sbjct: 260 LLSACAARGLGDEAEMVFKTMI-EGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESE 318
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLP 179
D+S+Y LI + + G++ E +++ ++ A PN + S +L+NL
Sbjct: 319 GYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS------ILLNLYGKH 372
Query: 180 G----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
G + F + + A D N++I + + G + L DPN +T+
Sbjct: 373 GRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETY 432
Query: 236 E--IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
E +F+ G L D +K + G G VPSS+ + + Q D A
Sbjct: 433 EGLVFA-----CGKGGLHEDA-KKILFHMNGKG--IVPSSKAYSGLIEAYGQAALYDEAL 484
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ + ++ + LI T+A G
Sbjct: 485 VAFNTMNEVGSKSTIDTYNSLIHTFARGG 513
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 98/273 (35%), Gaps = 36/273 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ L+ LY K G + + + +MK SS PD+ TYN+ +R + ++
Sbjct: 362 YSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLV 421
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
D + + T+ L + GL E A++ L + + AY LI YGQ
Sbjct: 422 -DENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALY 480
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLV----------------------NLKDLPG- 180
E + ++ + +Y ++I N K G
Sbjct: 481 DEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGI 540
Query: 181 ------------AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
A K F E E D + ++G Y G ++ ++E + G
Sbjct: 541 IEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGI 600
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
P+ + + Y +NG A + L++ I T
Sbjct: 601 LPSVLCYCMMLAVYAKNGRWDDASELLDEMIKT 633
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 142/335 (42%), Gaps = 10/335 (2%)
Query: 6 EALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AL +E+ GF + +N+ + + GH ++ M PD +TYN +
Sbjct: 285 DALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 344
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L+ ++ A+ ++ +M G D TTF+ L E+A +EL +
Sbjct: 345 NCLSKNGELDEAKGIVNQMVDRG-CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGL 403
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ + LI + G+ R++ ++ + ++Y +I L ++ L A
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALD 463
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E ES N +I A K+ R+E AEE+ ++ +G +A T+ D
Sbjct: 464 LLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLC 523
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ + A + +E+ + G P++ T + + H+ ++ ++ A LE +
Sbjct: 524 KAKRIDDATELIEQMVKEG------LQPNNITYNSILTHYCKQGNIKKAADILETMTANG 577
Query: 304 DDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVE 338
++ V + LI AGRT V L+ L+ +++
Sbjct: 578 FEIDVVTYGTLINGLCKAGRTQ-VALKLLRGMRIK 611
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 36/260 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ ++ +M + + FN+L+ + E+ + +E+ + PD YT+N+
Sbjct: 354 DEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNIL 413
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL V D R+ EEMK G D T++ L G A L E+E+
Sbjct: 414 INALCKVGDPHLGIRLFEEMKSSG-CTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
R + ++Y +I L + AE
Sbjct: 473 CPR-----------------------------------STVTYNTIIDALCKKMRIEEAE 497
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F + ++ + N +I K R+++A EL E+ + G PN T+ +Y
Sbjct: 498 EVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHY 557
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G++K A D LE G
Sbjct: 558 CKQGNIKKAADILETMTANG 577
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 109/296 (36%), Gaps = 44/296 (14%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN L+ + + + + ++ EM I PD T N ++AL + + A ++EEM
Sbjct: 165 FNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 224
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKA-------------------------------- 111
G VA D TTF+ L ++E G E A
Sbjct: 225 SHG-VAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRV 283
Query: 112 ERALKELENRNA---HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 168
E AL ++ A D Y + Q G++S ++ + + +Y +
Sbjct: 284 EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 343
Query: 169 IQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
I L +L A+ + + GC D N +I A + + RLE A +L +G
Sbjct: 344 INCLSKNGELDEAKGIVNQMVDRGCLP-DTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
P+ T+ I + + GD L + E+ +G P T + H
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG------CTPDEVTYNILIDHL 452
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE + ++M + S++ FN+L+ K + +I++M + P++ TYN
Sbjct: 494 EEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSI 553
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +I A ++E M +G D T+ L + +AG + A + L+ + +
Sbjct: 554 LTHYCKQGNIKKAADILETMTANG-FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 612
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
AY +I + NL + ++R +
Sbjct: 613 IRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 103/289 (35%), Gaps = 48/289 (16%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-------------------------- 87
P S Y ++ L E ++ EM+R+G
Sbjct: 87 PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDL 146
Query: 88 -----------VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
V AD F++L ++ VE + E E+ R D+ LI
Sbjct: 147 VLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKA 206
Query: 137 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC-FKEWESGCATY 195
+ + + + ++ ++Q + + A + K E+GC+
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPT 266
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
+ V NV+I Y K GR+E+A ++ G +P+ T+ F +NG + A+ +
Sbjct: 267 GVTV-NVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM 325
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
+ + G P T T + + ++D A+G I+ + VD
Sbjct: 326 DLMLQEGHD------PDVFTYNTVINCLSKNGELDEAKG---IVNQMVD 365
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 136/301 (45%), Gaps = 19/301 (6%)
Query: 1 MTEKAEALLEKMK----ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDS 56
MT +A + E M+ +L ++ NSL AK + + I ++M ++ +
Sbjct: 151 MTHEAIQVFEHMRVNGFRPHLHACTVLLNSL----AKDRLTDTVWKIYKKMVKLGVVANI 206
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
+ YNV + A D+ AE+V+ EM+ V D T++ L S+Y + G+ +A
Sbjct: 207 HVYNVLLHACCKSGDVEKAEKVLSEMELKC-VFPDLFTYNTLISLYCKKGMHYEALSVQD 265
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+E D+ Y LI + + G + E +++R ++ PN +++Y ++I +
Sbjct: 266 RMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDVTPN--HVTYTSLIDGYCRVN 323
Query: 177 DLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
DL A + KE S Y +T N ++ + GRL +A L R +P+ T
Sbjct: 324 DLDEALR-LKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTC 382
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
+ Y + GDM+ A+ +K + G G K T + + F + K++D A+
Sbjct: 383 NTLINAYCKIGDMRSALKVKDKMV----GAGLKL--DQFTYKALIHGFCKAKEIDKAKEL 436
Query: 296 L 296
L
Sbjct: 437 L 437
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 100/262 (38%), Gaps = 13/262 (4%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
S L +Y + + +A + + + L A L+ + V++I++ +
Sbjct: 138 VLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKM 197
Query: 154 RLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
+ ANI N ++ D+ AEK E E C D+ N +I Y K+G
Sbjct: 198 -VKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGM 256
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPS 272
A +++R G P+ T+ + R G M+ AV D P+
Sbjct: 257 HYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDV--------TPN 308
Query: 273 SETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLR 330
T + + + + D+D A E++ + V + ++R GR + ++L
Sbjct: 309 HVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLN 368
Query: 331 RLKMEKVEVSEAS-KKLLEAIC 351
+ K+E + L+ A C
Sbjct: 369 EMSERKIEPDNVTCNTLINAYC 390
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 138/326 (42%), Gaps = 16/326 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E++ +LE+M+E + +NSL+ + K E+ + EM + P+++TY
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ + ++ A+R EM G V + ++ L + + G +A + + +R
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCG-VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 594
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+D+ Y LI + G + E + I+ L + PN +Y ++I ++
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA--FTYNSLISGSCKQGNVD 652
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + +E DI N++I K G +E A+ L + RG PN T+
Sbjct: 653 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 712
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF--EQEKDVDGAEGFLE 297
D Y ++ + A LE+ + G VP I + +F ++EK + F E
Sbjct: 713 DGYCKSKNPTAAFQLLEEMLLRG-------VPPDAFIYNVILNFCCKEEKFEKALDLFQE 765
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGR 323
+L+K F LI Y +G+
Sbjct: 766 MLEKGFAS--TVSFNTLIEGYCKSGK 789
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 134/321 (41%), Gaps = 11/321 (3%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
S + NSL+ K E + M A ++PD YTY + A V ++ A+RV+
Sbjct: 179 SLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVL 238
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
EM G + + T++ + A L ++A + + ++ DL Y LI +
Sbjct: 239 LEMGEKG-CSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 297
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
E + + I+Y +I + D+ A + E + ++ +
Sbjct: 298 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLII 357
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
N ++ K G++E A E+ + +G +P+++T+ + + + R +M A + L++
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTY 318
K P+ T + + ++ G L E++ + V V+ L+ +
Sbjct: 418 KR------KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV-VYTTLMTAH 470
Query: 319 AAAGRT--SPVMLRRLKMEKV 337
A GR S ++L R++ + +
Sbjct: 471 AKEGRVEESRMILERMREQGI 491
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ EM + P+ TYN + DI A R+ +EM G + A+ ++ L +
Sbjct: 307 MLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG-IEANLIIWNTLLNGV 365
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+AG EKA ++E+ + D Y LI + + N++ + + ++
Sbjct: 366 CKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTV 425
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +I L +L G +E + V ++ A+AKEGR+E + + ER
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 223 ARRRGADPNAKTW 235
R +G P+ +
Sbjct: 486 MREQGILPDVFCY 498
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 73/184 (39%), Gaps = 33/184 (17%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A+ L + ++ L + + + +++ Y K+ +P +++EM + PD++ YNV
Sbjct: 687 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746
Query: 63 MRALAAVNDISGAERVIEEMKRDG---------------------------------RVA 89
+ A + +EM G +
Sbjct: 747 LNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
+ T+++L +AG+ +A+R E++ RN Y L+ Y GN+SEV +
Sbjct: 807 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866
Query: 150 WRSL 153
+ +
Sbjct: 867 FEEM 870
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LLE+M E + + + SL+ K G + + EM+ ++MP + TY
Sbjct: 791 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL 850
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++S + EEM G + D T+ + Y G +A + E+ +
Sbjct: 851 LHGYHNIGNMSEVSALFEEMVAKG-IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 909
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-----RLAFPNTANIS 164
++AY LI + EV ++ + RL P + I+
Sbjct: 910 MPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIA 956
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A+ L +M+E N+ ++ + SL+ Y G+ ++ A+ +EM A I PD TY
Sbjct: 824 MMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYY 883
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + A ++ A ++ +E+ G + + L + F + + L E+
Sbjct: 884 VMIDAYCREGNVMEACKLKDEILVKG-MPMSVAAYDALIQALCKKEEFFEVLKLLNEIGE 942
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
L + + GN+ E + RS+
Sbjct: 943 SGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 975
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 122/293 (41%), Gaps = 13/293 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LLEKM L + + +++L+ YA G E+ ++ M S + PD + YN +
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 228
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L+ + A + E++ G + D TF Y + G +A + E+ +
Sbjct: 229 CLSKAGKMEEASTYLLEIQGRG-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 287
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + + GNL E I+R L P+ S I L+ + A
Sbjct: 288 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF--IHGLLKNGRVQEAL 345
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F E + D+ + +I + K+G +E A EL + +G PN + D
Sbjct: 346 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
++GD++ A + + G P S T T + + + ++V AE F
Sbjct: 406 CKSGDIQRARKLFDGMPEKG------LEPDSVTYSTMIDGYCKSENV--AEAF 450
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 119/292 (40%), Gaps = 11/292 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA +L+ M L +S F L+ Y + + + ++ EM+ +++P + +Y
Sbjct: 97 EKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 156
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+S A +++E+M G + + +S L Y G E+A R L +
Sbjct: 157 INGLCHCKDLSLANKLLEKMTFSG-LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 215
Query: 123 AHRDLSAYQFLITLYGQTGNLSE--VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y +I+ + G + E Y + R P+ +++ I +
Sbjct: 216 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA--VTFGAFILGYSKTGKMTE 273
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K F E + + V+I + K G L A + G P+ +T F
Sbjct: 274 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 333
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
L+NG ++ A+ + + G VP T + + F ++ +V+ A
Sbjct: 334 GLLKNGRVQEALKVFSELKEKG------LVPDVFTYSSLISGFCKQGEVEKA 379
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 5/210 (2%)
Query: 22 MPFNSLMTL----YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
MP N L T+ + K G+ + +I + + A ++PD T + ++ L + A +
Sbjct: 287 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 346
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V E+K G V D T+S+L S + + G EKA E+ + ++ Y L+
Sbjct: 347 VFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
++G++ +++ + +++Y MI +++ A F E S
Sbjct: 406 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 465
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRG 227
V N ++ KEG +E A L ++G
Sbjct: 466 FVYNALVHGCCKEGDMEKAMNLFREMLQKG 495
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L + M E L S+ +++++ Y K+ + + ++ EM + + P S+ YN
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ A + EM + G A +F+ L Y ++ ++A + +E+ +
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKG--FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 529
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
D Y +I + + G + E +++ ++
Sbjct: 530 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
NV+I K G++E A E+ + G PN++T+ + + Y R +M A++ L++
Sbjct: 84 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-- 141
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
+ VPS+ + + KD+ A LE + + V V+ LI YA+
Sbjct: 142 ----EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 197
Query: 321 AGR 323
GR
Sbjct: 198 EGR 200
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 154/353 (43%), Gaps = 15/353 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA LL +M E L + + +N+L+ Y K G E +++ M++ + P++ TYN
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ N + A V+ +M + +V D T+++L +G F+ A R L + +R
Sbjct: 435 IKGYCKSN-VHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y +I ++ + E ++ SL N + Y +I + A
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
++ S + N +I +G+L+ A L+E+ + G P T I
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L++GD A ++ + +G P + T TF++ + +E + AE + +++
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTK------PDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEAS-----KKLLE 348
+ + LI+ Y G+T+ +L+R++ E S+ + K LLE
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 123/287 (42%), Gaps = 9/287 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
KA +L KM E + + +NSL+ ++G+ + ++ M ++PD +TY
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L + A + + +++ G V + ++ L Y +AG ++A L+++ ++
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKG-VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N + + LI G L E + + +++ T + + +I L+ D
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI-LIHRLLKDGDFDH 620
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F++ S D I Y +EGRL +AE++ + R G P+ T+
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
Y G A D L++ DTG PS T + ++H + K
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTG------CEPSQHTFLSLIKHLLEMK 721
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 5/235 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ A+ G +++ + EM + P+ YTYN + + ++ A + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D+ T+++L Y + + A + E+ + R+ AY LI +
Sbjct: 246 EAG-LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 144 SEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E ++ ++ FP +Y +I+ L + A KE E +I
Sbjct: 305 DEAMDLFVKMKDDECFPTVR--TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
V+I + + + E A EL + +G PN T+ + Y + G ++ AVD +E
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M K E +L MKE + S+ +NSLM +Y++ G EK I+ E+K+S + PD Y+YN
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 667
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ EMK G + D T++ YV +FE+A ++ +
Sbjct: 668 TVIYAYGRKGQMKEASRLFSEMKCSG-LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVT 726
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
+ + Y ++ Y + G L++ +L P + N+ +V+
Sbjct: 727 QGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVI 778
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 4/258 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L +M+E + ++SL+ YA +K+ A+ ++ + I P ++
Sbjct: 505 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 564
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + VN+++ AE+ E+ R R + D + + SIY + + K E+ L ++
Sbjct: 565 VLVNSKVNNLAEAEKAFLEL-RQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA 623
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + Y L+ +Y + G+ + I ++ + SY +I + A
Sbjct: 624 INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEAS 683
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F E + D+ N+ + +Y E A EL +G PN +T+ + Y
Sbjct: 684 RLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 743
Query: 243 LRNG---DMKLAVDCLEK 257
RNG D K+ V L +
Sbjct: 744 CRNGKLTDAKIFVSNLPQ 761
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 9/318 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++++M+ + S + +NSL++ Y K G E+ A+ QEM+ + PD TY
Sbjct: 295 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 354
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I A +EM R+G + T++ L ++ G F + E +
Sbjct: 355 ISGLDRAGKIDAAIVEYDEMVRNG-CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAG 413
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + L+ ++GQ G SEV +++ ++ A +Y+++I A
Sbjct: 414 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 473
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +K D+ N ++ A A+ GR E AE+L R P+ ++ Y
Sbjct: 474 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAY 533
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE-GFLEILKK 301
N + L I + R + W+ ++T + + ++ AE FLE+ +K
Sbjct: 534 A-NAKRLDKMKALSDDIYSERIEPHNWL-----VKTLVLVNSKVNNLAEAEKAFLELRQK 587
Query: 302 AVDDLGVEVFEPLIRTYA 319
L + V ++ Y
Sbjct: 588 RC-SLDINVLNAMVSIYG 604
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + ++M E + +N++++ A+ G E+ + EM+ PD Y+Y+ +
Sbjct: 472 AMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLH 531
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A A + + + +++ + +W L + + +AE+A EL +
Sbjct: 532 AYANAKRLDKMKALSDDIYSERIEPHNWLV-KTLVLVNSKVNNLAEAEKAFLELRQKRCS 590
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D++ ++++YG+ + +V +I ++ + N + +Y +++ + L D E
Sbjct: 591 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 650
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E +S D N +I AY ++G+++ A L + G P+ T+ IF Y+
Sbjct: 651 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 710
Query: 245 NGDMKLAVDCLEKAIDTG 262
N + A++ + + G
Sbjct: 711 NSMFEEAIELVRYMVTQG 728
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 1/255 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L+ MKE + +N+L++ + ++ + EMKAS PD T+N +
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A VI+EM+R G T+++L S YV+ GL E+A +E+E + D+
Sbjct: 290 KARRHDEAIEVIQEMERVG-CPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 348
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI+ + G + + + +Y +I++ P F E
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ S DI N ++ + + G + + ++ G P T+ Y R G
Sbjct: 409 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468
Query: 248 MKLAVDCLEKAIDTG 262
LA+ ++ ++ G
Sbjct: 469 FDLAMQIYKRMMEAG 483
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWM 63
A A+ +M + + + + +N ++ +Y+K P +++ ++ MK + PD YTYN +
Sbjct: 191 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLI 250
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +V +EMK G D TF++L +Y +A ++A ++E+E
Sbjct: 251 SCCRRRALYKEAAQVFDEMKASG-FEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI+ Y + G L + + + + + ++Y +I L + A
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 369
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E +GC ++ N +I + G+ + + R G P+ TW +
Sbjct: 370 EYDEMVRNGCKP-NLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVF 428
Query: 243 LRNG 246
+NG
Sbjct: 429 GQNG 432
>gi|1931651|gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
[Arabidopsis thaliana]
Length = 652
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L+ ++ + S+ + +++ + A G E+ IQ+MK P+ Y Y+ +
Sbjct: 220 KAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLL 279
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + D A+ ++ EMK G V + + L +Y++ GLF+++ L ELE+
Sbjct: 280 NSYSWKGDYKKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y L+ + G L E I+ ++ + + MI L K A++
Sbjct: 339 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE 398
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
++ E+ D+ + N M+ AY + G +E+ + ++ + P+ T+ I Y++
Sbjct: 399 LSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFI 458
Query: 244 R 244
+
Sbjct: 459 K 459
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 10/209 (4%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV-NDISGAERVIEEMK 83
NS+++ K G + + +MK + PD TYN + V N A +I E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + D + + +I G E+AE +++++ ++ Y L+ Y G+
Sbjct: 230 HNG-IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 144 ---SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRV 199
E+ +S+ L PN ++ L + + L D + + E ES G A ++
Sbjct: 289 KKADELMTEMKSIGLV-PNKVMMTTLLKVYIKGGLFD--RSRELLSELESAGYAENEMPY 345
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGA 228
+M G +K G+LE A + + + +G
Sbjct: 346 CMLMDG-LSKAGKLEEARSIFDDMKGKGV 373
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA+ L+ +MK + L + + +L+ +Y K G ++ ++ E++++ + Y +
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 348
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L+ + A + ++MK G V +D S + S + F++A+ ++ E
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKG-VRSDGYANSIMISALCRSKRFKEAKELSRDSETTY 407
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
DL ++ Y + G + V R+ + +
Sbjct: 408 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKM 438
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 12/216 (5%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ F ++++ YA GHP + I +EM A + P+ T+ + A A+ D++ + E
Sbjct: 422 VSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHER 481
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M G ++D +++L +Y + G A R + ++ +DL A+ +I Q+G
Sbjct: 482 MIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKT----KDLVAWTTIIAANVQSG 537
Query: 142 NLSEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
N ++ R L+ P+ A +S L + NL DL EK ++ D
Sbjct: 538 NNRAALDLYDRMLQSGIHPDIATLSTL--LVACANLGDLAMGEKIHRQALRSKLEQDAHF 595
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
N + YAK G LE A L R RG+D TW
Sbjct: 596 QNALAAMYAKCGSLEKATRLYRRC--RGSD--VATW 627
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 129/317 (40%), Gaps = 31/317 (9%)
Query: 16 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
N + P+N++M+ A GH + + +M+ S + A AA + G
Sbjct: 211 NRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQCSDRSCAIA--LGACAAAGHLRGG 268
Query: 76 ERVIEEMKRD---GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
++ ++++ + RV + L S+YV G ++A R ++ HR++ ++
Sbjct: 269 IQIHDKIQSEIHGTRV----LVLNALISMYVRCGKLDEALRVFADMP----HRNVVSWTS 320
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL-KD--LPGAEKCFKEWE 189
+I QTG+ S +++ + N +Y +++ + +L +D L K +
Sbjct: 321 MIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQIT 380
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY---YLRNG 246
+ D V N +I YA+ G L A E+ + N+KT F+ Y NG
Sbjct: 381 ASGIDADPIVQNSLINMYARSGLLAEAREVFDSILE-----NSKTVVSFTTMISAYAHNG 435
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKAVDD 305
+ A++ + T RG P+ T T + D+ GA +++ +D
Sbjct: 436 HPRQALEIFREM--TARG----VAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDS 489
Query: 306 LGVEVFEPLIRTYAAAG 322
+ L+ YA G
Sbjct: 490 SDPFAYNSLVDMYAKCG 506
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 8/299 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ ++M+ + + + +L+ +A+ G EK + +EM+ + PD Y YN M A +
Sbjct: 106 VFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYS 165
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A + M+ G D +++ L Y AGL +AE + L+ + +
Sbjct: 166 RAGFPQAASEIFSLMQHMG-CEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTM 224
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
++ L+ + ++GN++ + L + I+ M+ L E+
Sbjct: 225 KSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAA 284
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
E T D+ NV + AY + G LE E RRG + TW Y R +
Sbjct: 285 MERR-GTRDVGTYNVAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKE 343
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
+ ++ E+ +D G P + T + + E+ V+ + + K L
Sbjct: 344 YRRCLEIFEEMVDAG------CYPDAGTAKVLVAACSDERQVEQVTAIVRSMHKEAKTL 396
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 124/305 (40%), Gaps = 17/305 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA + ++MK ++ + ++ +Y K+ P + +EM++ + TY
Sbjct: 66 EKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTAL 125
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A AE V EEM++ G D ++ L Y AG + A +++
Sbjct: 126 VNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMG 184
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D ++Y L+ YG+ G E ++ SL+ S++ ++ ++ E
Sbjct: 185 CEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCE 244
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + D N M+ AY + GRL++ E L RRG + T+ + + Y
Sbjct: 245 EVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTR-DVGTYNVAVNAY 303
Query: 243 LRNG---DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
R G M+ A LE+ RG V + + + R E + LEI
Sbjct: 304 GRAGYLERMEAAFASLER-----RGLAADVVTWTSRMGAYARKKEYRR-------CLEIF 351
Query: 300 KKAVD 304
++ VD
Sbjct: 352 EEMVD 356
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 128/321 (39%), Gaps = 45/321 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+AE ++ +M+E + S+ +N+ + K EK + Q MK ++ TY +
Sbjct: 31 HRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRMKRERCRTNTETYTLM 90
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +V +EM+ G A+ T++ L + + GL EKAE +E++
Sbjct: 91 INVYGKSKQPMSAMKVFKEMQSIG-CKANICTYTALVNAFAREGLCEKAEEVFEEMQQAG 149
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ AY L+ Y + G FP A+ +++Q +
Sbjct: 150 HEPDVYAYNALMEAYSRAG---------------FPQAAS-EIFSLMQHM---------- 183
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
GC D N+++ AY + G AE + E +R+G P K+ + +
Sbjct: 184 --------GCEP-DRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAH 234
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL-KK 301
R+G++ + + + +G P + + + + + +D E L + ++
Sbjct: 235 ARSGNVARCEEVMAQLHKSG------LAPDTIALNAMLNAYGRAGRLDDMERLLAAMERR 288
Query: 302 AVDDLGVEVFEPLIRTYAAAG 322
D+G + + Y AG
Sbjct: 289 GTRDVG--TYNVAVNAYGRAG 307
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 3/196 (1%)
Query: 52 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 111
+P TY + +RA + AE VI EM+ G + T ++ ++A EKA
Sbjct: 10 CVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHG-IPPSATVYNAYLDGLLKARCAEKA 68
Query: 112 ERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQ 170
+ ++ + Y +I +YG++ ++++ ++ + ANI +Y ++
Sbjct: 69 VEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQ-SIGCKANICTYTALVN 127
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
AE+ F+E + D+ N ++ AY++ G + A E+ + G +P
Sbjct: 128 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEP 187
Query: 231 NAKTWEIFSDYYLRNG 246
+ ++ I D Y R G
Sbjct: 188 DRASYNILVDAYGRAG 203
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 133/337 (39%), Gaps = 13/337 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++ + + KE + NSL+ + G E++ + + MK S I P YT+N
Sbjct: 172 DRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFL 231
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I AERV E M+ G++ D +++ + Y +AG +KA ++E RN
Sbjct: 232 LNGLVNSMFIESAERVFEVMEC-GKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRN 290
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---LAFPNTANISYLNMIQVLVNLKDLP 179
D Y LI GN +++ + L P A Y +I L
Sbjct: 291 LEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHA---YSLVIGGLCKDGRTV 347
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
F+ ++ + +I AY K G + A L ER + G +P+ T+ +
Sbjct: 348 EGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIV 407
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ ++G + AV+ E D + S + + VD AE F E +
Sbjct: 408 NGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSS------LIDGLGKAGRVDEAEKFFEEM 461
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
+ + LI A +G+ ++ +MEK
Sbjct: 462 VERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEK 498
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 141/361 (39%), Gaps = 51/361 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE + E M+ +G + +N+++ Y K G+ +K +M+ ++ PD TY
Sbjct: 242 ESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTL 301
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++A + + + +EM+ G + +S + + G + + + +
Sbjct: 302 IQACYSEGNFDSCLHLYQEMEERG-LEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKG 360
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI------------- 169
+++ Y LI YG+ GN++E ++ ++ +++Y ++
Sbjct: 361 CKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAV 420
Query: 170 ---------QVLVN------LKDLPG-------AEKCFKEW-ESGCATYDIRVTNVMIGA 206
+V VN L D G AEK F+E E GC D N +I A
Sbjct: 421 EYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQ-DSYCYNALIDA 479
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
AK G++E A L +R + G D T+ I + + A+ + ID G
Sbjct: 480 LAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKG---- 535
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV---EVFEPLIRTYAAAGR 323
P++ + R V A L+ L +GV FE +I AGR
Sbjct: 536 --ITPTTASFRALSVGLCLSGKVARACKILDELAP----MGVIPETAFEDMINVLCKAGR 589
Query: 324 T 324
T
Sbjct: 590 T 590
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T + ++ E M + + + +L+ Y K G+ + + + MK PD TY V
Sbjct: 346 TVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGV 405
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + A E K D VA + +S+L +AG ++AE+ +E+ R
Sbjct: 406 IVNGLCKSGRLDEAVEYFEFCK-DNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVER 464
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+D Y LI ++G + E +++ +
Sbjct: 465 GCPQDSYCYNALIDALAKSGKMEEALVLFKRM 496
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 115/256 (44%), Gaps = 5/256 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE +LE + L +++ +N+L+ Y + I ++MK+ I PD TYN +
Sbjct: 352 KAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + ++ AE ++ EM++ G V TF+ L Y AG EK L +++ +
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ ++ ++ + + G + E I + + PN Y ++I + D A
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ--VYNSIIDAYIESGDTEQA 528
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ ++ + I N+++ + +++ AEEL R +G P+ ++
Sbjct: 529 FLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 588
Query: 242 YLRNGDMKLAVDCLEK 257
GD A++ L++
Sbjct: 589 CCNKGDTDKALELLQE 604
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KAE L+ +M++ + S FN+L+ Y G EK ++ +M+ I D ++
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478
Query: 61 VWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
++A I A ++++M +D VA + ++++ Y+E+G E+A +++++
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKD--VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 536
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N + Y L+ ++ + E + +LR +SY +I N D
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + +E +R + ++ A A GR+ + E L ++ + +P++ + I
Sbjct: 597 KALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656
Query: 240 DYYLR-NGDMKLA 251
D Y+R D K+A
Sbjct: 657 DAYVRCENDSKVA 669
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 1/236 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L++ + G ++ ++ EM + S+ PD +TY++ L + + E
Sbjct: 267 YNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESL 326
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G + +T S L + + G KAE+ L+ L + Y LI Y Q +L
Sbjct: 327 KKGVMLGAYTC-SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 385
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ I+ ++ +I+Y +I L L+ + AE E E + N +
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
I AY G+LE + +++G + ++ + +NG + AV L+ I
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+ K G K +++ + + ++P + YN + V D+ GA + E+MK
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR- 398
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
+ D T++ L + + + KAE + E+E + + LI YG G L +
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
+ + ++ + IS+ ++++ A
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVK-----------------------------------A 483
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ K G++ A + + + PNA+ + D Y+ +GD + A +EK ++G
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSG 539
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+A L+EKMK + S + +N L+ ++ ++ +I ++ + PD +YN
Sbjct: 525 TEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A D A +++EM + G + T+ L S AG E +++ ++
Sbjct: 585 IISACCNKGDTDKALELLQEMNKYG-IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK 643
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---LAFPNT 160
N S Y ++ Y + N S+V + + + +AF +T
Sbjct: 644 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 105/272 (38%), Gaps = 11/272 (4%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD+++YNV + L S A +V +EM G V +W T++ + +V+ G E R
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMG-VVPNWITYNTMIDGHVKGGDLEAGFR 250
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 171
++ + ++ Y L++ + G + E + + FP+ +Y +
Sbjct: 251 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD--GFTYSILFDG 308
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
L + F E ++++ K+G++ AE++ E G P
Sbjct: 309 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 368
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
+ + Y + D++ A E+ P T + + + V
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQM------KSRHIRPDHITYNALINGLCKLEMVTK 422
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
AE + ++K+ D VE F LI Y AG+
Sbjct: 423 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 454
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 138/326 (42%), Gaps = 16/326 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E++ +LE+M+E + +NSL+ + K E+ + EM + P+++TY
Sbjct: 467 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 526
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ + ++ A+R EM G V + ++ L + + G +A + + +R
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCG-VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 585
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+D+ Y LI + G + E + I+ L + PN +Y ++I ++
Sbjct: 586 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA--FTYNSLISGSCKQGNVD 643
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + +E DI N++I K G +E A+ L + RG PN T+
Sbjct: 644 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF--EQEKDVDGAEGFLE 297
D Y ++ + A LE+ + G VP I + +F ++EK + F E
Sbjct: 704 DGYCKSKNPTAAFQLLEEMLLRG-------VPPDAFIYNVILNFCCKEEKFEKALDLFQE 756
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGR 323
+L+K F LI Y +G+
Sbjct: 757 MLEKGFAS--TVSFNTLIEGYCKSGK 780
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ L+ ++ G + I E++ ++P+++TYN + ++ A +++EEM
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D T++ L +AG E+A+ ++E R + Y ++ Y ++ N
Sbjct: 654 IKG-INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP 712
Query: 144 SEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTN 201
+ +++ + L P A I Y ++ + A F+E E G A+ N
Sbjct: 713 TAAFQLLEEMLLRGVPPDAFI-YNVILNFCCKEEKFEKALDLFQEMLEKGFAS--TVSFN 769
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+I Y K G+L+ A L E + PN T+ D+ + G M
Sbjct: 770 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMM 816
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ EM + P+ TYN + DI A R+ +EM G + A+ ++ L +
Sbjct: 298 MLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG-IEANLIIWNTLLNGV 356
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+AG EKA ++E+ + D Y LI + + N++ + + ++
Sbjct: 357 CKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTV 416
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +I L +L G +E + V ++ A+AKEGR+E + + ER
Sbjct: 417 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476
Query: 223 ARRRGADPNAKTW 235
R +G P+ +
Sbjct: 477 MREQGILPDVFCY 489
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 127/321 (39%), Gaps = 29/321 (9%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
S + NSL+ K E + M A ++PD YTY + A V ++ A+RV+
Sbjct: 188 SLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVL 247
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
EM R L ++A + + ++ DL Y LI +
Sbjct: 248 LEMGEKAR-------------------LLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 288
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
E + + I+Y +I + D+ A + E + ++ +
Sbjct: 289 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLII 348
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
N ++ K G++E A E+ + +G +P+++T+ + + + R +M A + L++
Sbjct: 349 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 408
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTY 318
K P+ T + + ++ G L E++ + V V+ L+ +
Sbjct: 409 KR------KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV-VYTTLMTAH 461
Query: 319 AAAGRT--SPVMLRRLKMEKV 337
A GR S ++L R++ + +
Sbjct: 462 AKEGRVEESRMILERMREQGI 482
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 121/301 (40%), Gaps = 40/301 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A+ L + ++ L + + + +++ Y K+ +P +++EM + PD++ YNV
Sbjct: 678 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 737
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + +EM G A +F+ L Y ++G ++A L+E+ +
Sbjct: 738 LNFCCKEEKFEKALDLFQEMLEKG--FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + G + E R+W ++ N+ +P A+
Sbjct: 796 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ-----ERNV--------------MPTAK 836
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
TY T+++ G Y G + L E +G +P+ T+ + D Y
Sbjct: 837 -----------TY----TSLLHG-YHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAY 880
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R G++ A ++ + G + T R F+ ++D A E+L+
Sbjct: 881 CREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAA---EVLRSM 937
Query: 303 V 303
V
Sbjct: 938 V 938
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 110/259 (42%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + L E MK + +N+L+T + E+ A+ ++MK+ +PD TYN +
Sbjct: 87 KIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALL 146
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V+ EM+ +G + T+++L S Y GL ++A ++
Sbjct: 147 DVYGKSRRTKEAMEVLREMEVNG-CSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGI 205
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ D+ Y L++ + + G R++ +R A ++ +I++ N K
Sbjct: 206 NLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMK 265
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+E ++ C DI N ++ + + G + + +R G P T+ Y
Sbjct: 266 VFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYS 325
Query: 244 RNGDMKLAVDCLEKAIDTG 262
R G A+D ++ ++ G
Sbjct: 326 RCGSFDQAMDIYKRMLEAG 344
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 15/318 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVW 62
+A + +KM+E + + +N ++ +Y K G P KI + + MK + ++PD YTYN
Sbjct: 51 EAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTL 110
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A V ++MK G V D T++ L +Y ++ ++A L+E+E
Sbjct: 111 ITCCRRGSLHEEAAAVFKDMKSMGFV-PDKVTYNALLDVYGKSRRTKEAMEVLREMEVNG 169
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI+ Y + G L E + + N +Y ++ V A
Sbjct: 170 CSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAM 229
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F E + +I N +I + G+ ++ E + P+ TW +
Sbjct: 230 RVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVF 289
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+NG M V + K + +VP +T T + + + D A ++I K+
Sbjct: 290 GQNG-MDSEVSGVFKEMKR-----AGFVPERDTYNTLISAYSRCGSFDQA---MDIYKRM 340
Query: 303 VDDLGVEVFEPLIRTYAA 320
+ + G+ P + TY A
Sbjct: 341 L-EAGI---TPDLSTYNA 354
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 107/235 (45%), Gaps = 1/235 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A A+ + MK + + +N+L+ +Y K+ ++ +++EM+ + P TYN
Sbjct: 119 LHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYN 178
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + A + +M +G + D T++ L S +V AG E A R E+
Sbjct: 179 SLISAYARDGLLKEAMELKNQMV-EGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRA 237
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + LI ++G G +E+ +++ ++ + +++ ++ V
Sbjct: 238 AGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSE 297
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
FKE + + N +I AY++ G + A ++ +R G P+ T+
Sbjct: 298 VSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTY 352
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 1/234 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A +L +M+ S + +NSL++ YA+ G ++ + +M I D +TY
Sbjct: 155 TKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTT 214
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A RV EM+ G + TF+ L ++ G F + + +E++N
Sbjct: 215 LLSGFVRAGKDESAMRVFAEMRAAG-CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNS 273
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ + L+ ++GQ G SEV +++ ++ A +Y +I A
Sbjct: 274 CCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQA 333
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+K T D+ N ++ A A+ G E +E++ + PN T+
Sbjct: 334 MDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTY 387
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 134/336 (39%), Gaps = 42/336 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + ++MK +N+L++ Y++ G ++ I + M + I PD TYN
Sbjct: 294 MDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYN 353
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY---------------VEA 105
+ ALA +E++ EMK DGR + T+ +L Y + +
Sbjct: 354 AVLAALARGGLWEQSEKIFAEMK-DGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICS 412
Query: 106 GLFE--------------------KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G+ E +AE A EL+ + DLS ++++YG+ ++
Sbjct: 413 GVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTK 472
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
I + + + +Y +++ + ++ +E+ KE + D N +I
Sbjct: 473 TNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIF 532
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AY + GR++ A + R G P+ T+ F Y + + A+D + I G
Sbjct: 533 AYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHG--- 589
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
P+ T + + + + D A F+ L +
Sbjct: 590 ---CKPNQNTYNSVVDGYCKHNHRDDAIMFISSLHE 622
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 123/328 (37%), Gaps = 14/328 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +LL + + G + SL+T G + + ++M+ P TYNV +
Sbjct: 17 AASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILN 76
Query: 65 ALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ N I G + E MK G V D T++ L + L E+A K++++
Sbjct: 77 VYGKMGMPWNKIKG---LFEGMKNAG-VLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKS 132
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y L+ +YG++ E + R + + + + ++Y ++I L
Sbjct: 133 MGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKE 192
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + + G D+ ++ + + G+ E+A + R G PN T+
Sbjct: 193 AMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIK 252
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ G + E+ ++ VP T T + F Q G + +K
Sbjct: 253 MHGNRGKFAEMMKVFEEIKNSC------CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 306
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVM 328
+A + + LI Y+ G M
Sbjct: 307 RAGFVPERDTYNTLISAYSRCGSFDQAM 334
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%), Gaps = 3/192 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A L +M E + + +L++ + + G E + EM+A+ P+ T+N
Sbjct: 189 LLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFN 248
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + +V EE+K V D T++ L +++ + G+ + KE++
Sbjct: 249 ALIKMHGNRGKFAEMMKVFEEIKNSCCV-PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL-P 179
+ Y LI+ Y + G+ + I++ + L T ++S N + + L
Sbjct: 308 AGFVPERDTYNTLISAYSRCGSFDQAMDIYKRM-LEAGITPDLSTYNAVLAALARGGLWE 366
Query: 180 GAEKCFKEWESG 191
+EK F E + G
Sbjct: 367 QSEKIFAEMKDG 378
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M K E +L MKE + S+ +NSLM +Y++ G EK I+ E+K+S + PD Y+YN
Sbjct: 590 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYN 649
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ EMK G + D T++ YV +FE+A ++ +
Sbjct: 650 TVIYAYGRKGQMKEASRLFSEMKCSG-LKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVT 708
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
+ + Y ++ Y + G L++ +L P + N+ +V+
Sbjct: 709 QGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGYSKQEQQNLFEVI 760
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 4/258 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L +M+E + ++SL+ YA +K+ A+ ++ + I P ++
Sbjct: 487 EQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTL 546
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + VN+++ AE+ E+ R R + D + + SIY + + K E+ L ++
Sbjct: 547 VLVNSKVNNLAEAEKAFLEL-RQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESA 605
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + Y L+ +Y + G+ + I ++ + SY +I + A
Sbjct: 606 INLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEAS 665
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F E + D+ N+ + +Y E A EL +G PN +T+ + Y
Sbjct: 666 RLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 725
Query: 243 LRNG---DMKLAVDCLEK 257
RNG D K+ V L +
Sbjct: 726 CRNGKLTDAKIFVSNLPQ 743
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 9/318 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++++M+ + S + +NSL++ Y K G E+ A+ QEM+ + PD TY
Sbjct: 277 DEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTL 336
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I A +EM R+G + T++ L ++ G F + E +
Sbjct: 337 ISGLDRAGKIDAAIVEYDEMVRNG-CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAG 395
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + L+ ++GQ G SEV +++ ++ A +Y+++I A
Sbjct: 396 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 455
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +K D+ N ++ A A+ GR E AE+L R P+ ++ Y
Sbjct: 456 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAY 515
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE-GFLEILKK 301
N + L I + R + W+ ++T + + ++ AE FLE+ +K
Sbjct: 516 A-NAKRLDKMKALSDDIYSERIEPHNWL-----VKTLVLVNSKVNNLAEAEKAFLELRQK 569
Query: 302 AVDDLGVEVFEPLIRTYA 319
L + V ++ Y
Sbjct: 570 RC-SLDINVLNAMVSIYG 586
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + ++M E + +N++++ A+ G E+ + EM+ PD Y+Y+ +
Sbjct: 454 AMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLH 513
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A A + + + +++ + +W L + + +AE+A EL +
Sbjct: 514 AYANAKRLDKMKALSDDIYSERIEPHNWLV-KTLVLVNSKVNNLAEAEKAFLELRQKRCS 572
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D++ ++++YG+ + +V +I ++ + N + +Y +++ + L D E
Sbjct: 573 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 632
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E +S D N +I AY ++G+++ A L + G P+ T+ IF Y+
Sbjct: 633 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 692
Query: 245 NGDMKLAVDCLEKAIDTG 262
N + A++ + + G
Sbjct: 693 NSMFEEAIELVRYMVTQG 710
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 1/255 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L+ MKE + +N+L++ + ++ + EMKAS PD T+N +
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A VI+EM+R G T+++L S YV+ GL E+A +E+E + D+
Sbjct: 272 KARRHDEAIEVIQEMERVG-CPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 330
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI+ + G + + + +Y +I++ P F E
Sbjct: 331 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 390
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ S DI N ++ + + G + + ++ G P T+ Y R G
Sbjct: 391 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 450
Query: 248 MKLAVDCLEKAIDTG 262
LA+ ++ ++ G
Sbjct: 451 FDLAMQIYKRMMEAG 465
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWM 63
A A+ +M + + + + +N ++ +Y+K P +++ ++ MK + PD YTYN +
Sbjct: 173 AVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLI 232
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +V +EMK G D TF++L +Y +A ++A ++E+E
Sbjct: 233 SCCRRRALYKEAAQVFDEMKASG-FEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 291
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI+ Y + G L + + + + + ++Y +I L + A
Sbjct: 292 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 351
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E +GC ++ N +I + G+ + + R G P+ TW +
Sbjct: 352 EYDEMVRNGCKP-NLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVF 410
Query: 243 LRNG 246
+NG
Sbjct: 411 GQNG 414
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 97/234 (41%), Gaps = 1/234 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++LM K E + +++EM+ + P+ YT+ + +R L I A + M
Sbjct: 230 YSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMD 289
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T++ L AG E A+ +++ D Y L+ + G+L
Sbjct: 290 DEG-CGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDL 348
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
W + +++ ++ VL +D A F ++ N +
Sbjct: 349 DTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTL 408
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
I + GR+E+A +L + G P A T+ F DY+ ++G+ AV+ EK
Sbjct: 409 ICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEK 462
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 9/238 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKA L + MK + + FN L+ ++ K+G ++ + +EM + PD+ TYN+
Sbjct: 804 TEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNI 863
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADW----TTFSNLASIYVEAGLFEKAERALKE 117
+ +LA N++ A ++ V++D+ T+ L + G E+A R +E
Sbjct: 864 VISSLAKSNNLDKALDFFYDL-----VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEE 918
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ + + + + LI YG+ G+ ++++ + SY ++ L
Sbjct: 919 MSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGR 978
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ A F E +S D N +I K R+E A L R RG P+ T+
Sbjct: 979 VDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTY 1036
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 124/303 (40%), Gaps = 46/303 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A LL+ M+ + + ++ + + + + K+G K ++MKA I+P+ N
Sbjct: 419 EDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +LA + + A+ + ++ +G +A D T++ + Y + G ++A L E+
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENG-LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ LI + G + E ++++ ++ ++K P
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMK-------------------DMKLSPTV- 577
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
TY N ++ KEGR++ A EL E + PN ++ D +
Sbjct: 578 ----------VTY-----NTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Query: 243 LRNGDMKLAVDCLEK--AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+N +++LA+ K +D P T T + +E V+ A F LK
Sbjct: 623 CKNDEVELALKMFSKMTVMDCK--------PDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Query: 301 KAV 303
K++
Sbjct: 675 KSM 677
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 75 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
A ++ ++ + ++ +++ L +E EKA K+++N D + L+
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL 830
Query: 135 TLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
++G++G ++E++ +++ + R P+ I+Y +I L +L A F + S
Sbjct: 831 AVHGKSGKITELFELYKEMISRRCKPDA--ITYNIVISSLAKSNNLDKALDFFYDLVSSD 888
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
R +I AK GRLE A L E G PN + I + Y + GD + A
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETAC 948
Query: 253 DCLEKAIDTG 262
++ ++ G
Sbjct: 949 QLFKRMVNEG 958
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 48 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 107
K I P +YN + L V+ A + ++MK G A D TF+ L +++ ++G
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGK 838
Query: 108 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 167
+ KE+ +R D Y +I+ ++ NL + + L + +Y
Sbjct: 839 ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898
Query: 168 MIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 226
+I L + L A + F+E + GC + + N++I Y K G E A +L +R
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKP-NCAIFNILINGYGKIGDTETACQLFKRMVNE 957
Query: 227 GADPNAKTWEIFSD 240
G P+ K++ I D
Sbjct: 958 GIRPDLKSYTILVD 971
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 5/217 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KA EKMK + + + N+ + A+ G + + ++ + + PDS TYN+
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M+ + V + A ++ EM R+G D ++L +AG ++A + +++
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNG-CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDM 571
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+ Y L++ G+ G + + ++ S+ + PNT IS+ ++ ++
Sbjct: 572 KLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNT--ISFNTLLDCFCKNDEVE 629
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
A K F + D+ N +I KE ++ +A
Sbjct: 630 LALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A L ++M + + L+ G ++ E+K++ + PD YN
Sbjct: 944 TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + A + EM+ G + D T+++L AG+ E+A+R +EL+
Sbjct: 1004 IINGLGKSQRMEEALALYNEMRNRG-IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLA 1062
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D+ Y LI Y + N Y +++++
Sbjct: 1063 GLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 143/322 (44%), Gaps = 16/322 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK-ASSIMPDSYTYNVW 62
+A ALL++M E L + + + +++ K G ++++M+ S I P+ Y+
Sbjct: 195 EAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAI 254
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+ + EM+ G ++ + T++ + + + +G + +A+R L+E+ R
Sbjct: 255 IDGLWKDGRQTDAQNLFSEMQEKG-ISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK 313
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ + LI + G E ++ + R PNT I+Y +MI L
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT--ITYNSMIDGFSKQNRLDA 371
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F + + D+ +++I Y R+++ +L RRG N T+
Sbjct: 372 AERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIH 431
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ + G++ A+D L++ I +G P+ T T + + A ++++
Sbjct: 432 GFCQLGNLNAALDLLQEMISSG------VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQ 485
Query: 301 KAVDDLGVEV----FEPLIRTY 318
K+ DL EP ++TY
Sbjct: 486 KSKMDLDASHPFNDVEPDVQTY 507
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 107/272 (39%), Gaps = 22/272 (8%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ F+ L+ Y + ++ EM ++ ++ TY + + +++ A +++E
Sbjct: 389 ITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQE 448
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-----------RNAHRDLSAY 130
M G V + T + L G + A K ++ + D+ Y
Sbjct: 449 MISSG-VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTY 507
Query: 131 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI G SE ++ + R P+T I+Y ++I L L A + F
Sbjct: 508 NILICGLINEGKFSEAEELYEEMPHRGLVPDT--ITYNSVIDGLCKQSRLDEATQMFDSM 565
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
S + D+ +I Y K GR+ + E+ RRG NA T+ + + G++
Sbjct: 566 GSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNI 625
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
A+D ++ I +G P + TIR +
Sbjct: 626 NGALDIFQEMISSG------VYPDTITIRNML 651
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 5/164 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ G + + +EM ++PD+ TYN + L + + A ++ + M
Sbjct: 507 YNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMG 566
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D TF+ L + Y + G E+ R + Y+ LI + Q GN+
Sbjct: 567 SKG-FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNI 625
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
+ I++ + +P+T I NM+ L + ++L A +C
Sbjct: 626 NGALDIFQEMISSGVYPDTITIR--NMLTGLWSKEELKRAVQCL 667
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 144/322 (44%), Gaps = 12/322 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTYNV 61
++A + +KMK+ ++ FN+L+ Y G PE+ ++ M S+ P+ TYN+
Sbjct: 145 KEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNI 204
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+RA + +I A V+ +M G + D T++ LA Y + G +AE + E++
Sbjct: 205 LVRAWCSKKNIEEAWNVLHKMVASG-IQPDVVTYNILARAYAQKGETLRAEDLILEMQYE 263
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYR-IWRSLRLAF-PNTANISYLNMIQVLVNLKDLP 179
+ ++ Y + GN+ E R ++R L PN + + ++I+ +++ D
Sbjct: 264 KVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNL--VIFNSLIKGFLDITDTD 321
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G ++ E D+ + ++ A++ G ++ +E+ + G +P+ + I +
Sbjct: 322 GVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILA 381
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y+R G+ + A L +G P+ T + + ++ A+ E +
Sbjct: 382 KGYVRAGETENAESVLTSMAKSG------VRPNVVICTTIISGWCSAGKMENAKMVYEKM 435
Query: 300 KKAVDDLGVEVFEPLIRTYAAA 321
+ ++ FE LI YA A
Sbjct: 436 CEIGISPNLKTFETLIWGYAEA 457
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 119/307 (38%), Gaps = 14/307 (4%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ + +L+ K H E I +I +++ + + PDS YN + A + ++ A ++ ++
Sbjct: 94 ITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQK 153
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE----NRNAHRDLSAYQFLITLY 137
MK G +TF+ L Y AG K E LK L + + + Y L+ +
Sbjct: 154 MKDTG-CKPTTSTFNTLIKGYGNAG---KPEEGLKMLHLMSLDGSVKPNDRTYNILVRAW 209
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
N+ E + + + + ++Y + + + AE E + +
Sbjct: 210 CSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNE 269
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
R +++ Y KEG + A R + G PN + +L D D +++
Sbjct: 270 RTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITD----TDGVDE 325
Query: 258 AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRT 317
A+ G K P T T M + +D + + KA + + F L +
Sbjct: 326 ALTLMEEYGVK--PDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKG 383
Query: 318 YAAAGRT 324
Y AG T
Sbjct: 384 YVRAGET 390
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 125/299 (41%), Gaps = 12/299 (4%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
LM + G P + I + P TY + AL + +I +++ +G
Sbjct: 64 LMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENG 123
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
+ D ++ + + + E+G ++A + +++++ S + LI YG G E
Sbjct: 124 -MKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEG 182
Query: 147 YRIWRSLRL---AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ + L PN + +Y +++ + K++ A + + D+ N++
Sbjct: 183 LKMLHLMSLDGSVKPN--DRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNIL 240
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
AYA++G AE+L + PN +T I + Y + G+M A+ + + + G
Sbjct: 241 ARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGV 300
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P+ + ++ F D DG + L ++++ V F ++ +++AG
Sbjct: 301 H------PNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAG 353
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 89/237 (37%), Gaps = 36/237 (15%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AE L+ +M+ + + ++ Y K G+ + + MK + P+ +N
Sbjct: 250 TLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNS 309
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ + D G + + M+ G V D TFS + + + AGL +K + ++
Sbjct: 310 LIKGFLDITDTDGVDEALTLMEEYG-VKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKA 368
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ A+ L Y + G + S+
Sbjct: 369 GIEPDIHAFSILAKGYVRAGETENAESVLTSMA--------------------------- 401
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+SG ++ + +I + G++ENA+ + E+ G PN KT+E
Sbjct: 402 -------KSG-VRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETL 450
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 116/263 (44%), Gaps = 2/263 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A LL++M+E + F+++M YA+ G + QEM + + P+ Y
Sbjct: 392 LMDQARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYG 451
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A V ++ A + M+ G + A+ ++L +Y + G F+ A+ K++++
Sbjct: 452 SLINGFAEVGNVEEALKYFRMMEESG-IPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKD 510
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ A +I+LY G +SE ++++LR +S+ M+ + ++ L
Sbjct: 511 LEGGPDIIASNSMISLYADLGMISEAELVFKNLR-ENGQADGVSFATMMYLYKSMGMLDE 569
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A +E + D N ++ YA G+L EL + P+ T++I
Sbjct: 570 AIDIAEEMKQSGLLRDCVSYNKVMACYATNGQLRECAELLHEMIGQKLLPDGGTFKILFT 629
Query: 241 YYLRNGDMKLAVDCLEKAIDTGR 263
+ G + LE A G+
Sbjct: 630 VLKKGGFPSEGIAQLESAYLEGK 652
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 133/323 (41%), Gaps = 9/323 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +AE+LL+KM+E + + +N ++LYA G+ +++ ++PD ++
Sbjct: 182 LLSEAESLLDKMEERRISPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPDIVSHR 241
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L N + E VIEEMK+ + D + + +Y+ GL ++A L + +
Sbjct: 242 TILHILCGRNMVREVEAVIEEMKKSSQ-KIDVHSVPGIIKMYINEGLHDRANNLLDKCQ- 299
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLP 179
+ +I Y + G +E ++ R L P + Y M++ K
Sbjct: 300 FDVGFSSKVRAAIIDAYAERGLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKLYD 359
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A FK + D N +I ++ ++ A +L + + G P T+
Sbjct: 360 KAFSLFKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVM 419
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y R G + AVD ++ + G P+ + + F + +V+ A + ++
Sbjct: 420 ACYARLGQLSDAVDVYQEMVKAGVK------PNEVVYGSLINGFAEVGNVEEALKYFRMM 473
Query: 300 KKAVDDLGVEVFEPLIRTYAAAG 322
+++ V LI+ Y+ G
Sbjct: 474 EESGIPANQIVLTSLIKVYSKLG 496
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 113/301 (37%), Gaps = 29/301 (9%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ L+ +YAK G E + I+ M+ + PD T N ++ L V + AER ++
Sbjct: 13 YGMLVDVYAKAGLVEAL-LWIKHMRLRGLFPDEVTMNTVVKVLKDVGEFDKAERFYKDWC 71
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD--LSAYQFLITLYGQTG 141
GRV D ++ L++ N R +S FL+T +TG
Sbjct: 72 A-GRVELDGLELDSM-------------------LDSENGSRSEPVSFKHFLLTELFKTG 111
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
++ L +Y +I + L A + F E D N
Sbjct: 112 GRVKIGGSSDEETLVRKPCLTSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFN 171
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
MI G L AE L ++ R P+ +T+ IF Y G++ A++C K +
Sbjct: 172 TMIFTCGSHGLLSEAESLLDKMEERRISPDTRTYNIFLSLYADAGNINAALECYWKIRNV 231
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
G VP + RT + V E +E +KK+ + V +I+ Y
Sbjct: 232 G------LVPDIVSHRTILHILCGRNMVREVEAVIEEMKKSSQKIDVHSVPGIIKMYINE 285
Query: 322 G 322
G
Sbjct: 286 G 286
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 135/309 (43%), Gaps = 21/309 (6%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ LY K G + + EM S + D+ T+N + + +S AE ++++M+
Sbjct: 135 YNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGLLSEAESLLDKME 194
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ R++ D T++ S+Y +AG A ++ N D+ +++ ++ + +
Sbjct: 195 -ERRISPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPDIVSHRTILHILCGRNMV 253
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVN--LKDLPG--AEKCFKEWESGCATYDIRV 199
EV + ++ + S +I++ +N L D +KC +++ G ++ +V
Sbjct: 254 REVEAVIEEMKKSSQKIDVHSVPGIIKMYINEGLHDRANNLLDKC--QFDVGFSS---KV 308
Query: 200 TNVMIGAYAKEGRLENAEELKERARR-RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
+I AYA+ G AE + R G + + + Y G KL +KA
Sbjct: 309 RAAIIDAYAERGLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAY---GKAKL----YDKA 361
Query: 259 IDTGRG--DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 316
+G + G W P T + ++ F +D A L+ +++A F ++
Sbjct: 362 FSLFKGMRNHGTW-PDEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVMA 420
Query: 317 TYAAAGRTS 325
YA G+ S
Sbjct: 421 CYARLGQLS 429
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/224 (18%), Positives = 88/224 (39%), Gaps = 3/224 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A + E+MK+ L + +N +M YA G + ++ EM ++PD T+
Sbjct: 566 MLDEAIDIAEEMKQSGLLRDCVSYNKVMACYATNGQLRECAELLHEMIGQKLLPDGGTFK 625
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L S +E +G+ A + SI+ GL A + +
Sbjct: 626 ILFTVLKKGGFPSEGIAQLESAYLEGKPYARQAV---ITSIFSVVGLHALALESCESFTK 682
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D AY I YG +G + + + + + ++ +N++ + G
Sbjct: 683 AEVALDSFAYNVAIYAYGSSGEIDKALKTFMKRQDEGLEPDLVTSINLVHCYGKAGMVEG 742
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
++ + + + G + + ++ AY R + AE + + R
Sbjct: 743 VKRIYSQLKYGEIKPNDSLVKAVVDAYKNANRHDLAELVNQDIR 786
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 123/296 (41%), Gaps = 38/296 (12%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTG--HPEKIPAIIQEMKASSIMPDSYTYNV 61
K + LL+ M+E + FN+L+ K G P ++ E++ S + PD+ TYN
Sbjct: 272 KVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNT 331
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + +++ A +V ++M+ D T++ + S+Y GL KAE+ +LE+R
Sbjct: 332 LISACSRASNLEEAAKVFDDMEAH-HCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESR 390
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW------------------------------- 150
D +Y L+ + + GN+ +V IW
Sbjct: 391 GFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELA 450
Query: 151 ----RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
R ++ + N ++Y +I L + A E + ++ + +I
Sbjct: 451 LQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICG 510
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
YAK G+ AEE + R G P+ + + D +LR + K A+ ++ + G
Sbjct: 511 YAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDG 566
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 7/253 (2%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM--RALAAVND 71
E + G + +N++M +YA+ G K+ ++ M+ PD ++N + R A
Sbjct: 247 EPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMM 306
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
+ A ++ E++R G + D T++ L S A E+A + ++E + DL Y
Sbjct: 307 PNLAIELLNEVRRSG-LRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYN 365
Query: 132 FLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
+I++YG+ G + +++ L R FP+ +SY +++ ++ ++ ++E
Sbjct: 366 AMISVYGRCGLSGKAEQLFNDLESRGFFPDA--VSYNSLLYAFAREGNVEKVKEIWEEMV 423
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
D N MI Y K+G+ E A +L + G +P+A T+ + D + +
Sbjct: 424 KIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIA 483
Query: 250 LAVDCLEKAIDTG 262
A + + ++TG
Sbjct: 484 EAAGVMSEMLNTG 496
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 114/275 (41%), Gaps = 3/275 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
++++++++ S ++ +A+ G+ ++ I MKA+ P + Y V R L+
Sbjct: 870 VVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLS 929
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ E ++ EM+ G D + ++++ +YV F K + + ++ D
Sbjct: 930 RGKQVRDVEAMLSEMEEAG-FKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDE 988
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI +Y + E + + +R+A +Y +++ + + AE+ F+E
Sbjct: 989 DTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEE 1048
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+S D + M+ Y G AE L + G +P T + Y +G
Sbjct: 1049 LQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQ 1108
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
+ A L +TG +P S I ++R+
Sbjct: 1109 PQEAEKVLSNLKETGSNLST--LPYSSVIDAYLRN 1141
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
EA+L +M+E +NS++ +Y K + Q +K + PD TYN +
Sbjct: 938 EAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVM 997
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
+ ++ EM+ G + T+ +L + + + L E+AE +EL+++
Sbjct: 998 YCRDHRPEEGFSLMHEMRVAG-LEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKL 1056
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D S Y ++ +Y +G+ S+ R++ ++ A G E
Sbjct: 1057 DRSFYHTMMKIYRNSGSHSKAERLFSMMKDA-----------------------GVEPT- 1092
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
I ++++ +Y G+ + AE++ + G++ + + D YLRN
Sbjct: 1093 -----------IATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRN 1141
Query: 246 GDMKLAVDCL 255
GD + + L
Sbjct: 1142 GDYNIGIQKL 1151
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN---------LS 144
++ + +Y G F K + L + R DL ++ LI + G L+
Sbjct: 256 VYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLN 315
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
EV R LR P+T I+Y +I +L A K F + E+ D+ N MI
Sbjct: 316 EVRR--SGLR---PDT--ITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMI 368
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
Y + G AE+L RG P+A ++ + R G+++ + E+ + G G
Sbjct: 369 SVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFG 428
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 137/349 (39%), Gaps = 48/349 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE++ +++ + +N+L+ YA +G E+ AI M P T N
Sbjct: 795 QKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGL 854
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++AL DGR L +YV ++EL++
Sbjct: 855 LQALIV----------------DGR----------LDELYV----------VVQELQDMG 878
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
S+ ++ + + GN+ EV +I+ ++ A FP T ++ Y M ++L K +
Sbjct: 879 FKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFP-TMHL-YRVMARLLSRGKQVRD 936
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E E E D+ + N ++ Y ++ +R + G +P+ T+
Sbjct: 937 VEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIV 996
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y R+ + + + G P +T ++ + F +++ V+ AE E L+
Sbjct: 997 MYCRDHRPEEGFSLMHEMRVAG------LEPKLDTYKSLVASFGKQQLVEQAEELFEELQ 1050
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
L + +++ Y +G S + +K VE + A+ LL
Sbjct: 1051 SKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLL 1099
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 118 LENRNAHRDLSAYQFLITLYGQTG--NLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVN 174
L++R + F++ GQ EVY W +LR + PN +S ++ VL
Sbjct: 176 LDDRKVQMTPTDLCFVVKSVGQESWHRALEVYE-WLNLRHWYSPNARMLS--TILSVLGK 232
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
A + F E A ++V N M+G YA+ GR +EL + R RG P+ +
Sbjct: 233 ANQEALAVEVFMRAEPS-AGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVS 291
Query: 235 WEIFSDYYLRNGDM--KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+ + L+ G M LA++ L + +G P + T T + + +++ A
Sbjct: 292 FNTLINARLKAGAMMPNLAIELLNEVRRSG------LRPDTITYNTLISACSRASNLEEA 345
Query: 293 EGFLEILKKAVDDLGVEVFEPLIRTYAA 320
K DD+ +P + TY A
Sbjct: 346 -------AKVFDDMEAHHCQPDLWTYNA 366
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 60/167 (35%), Gaps = 31/167 (18%)
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R+ +T F +L +E L +A + ++ S Y+ ++ LY + G
Sbjct: 699 RELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYESMVLLYCKMG-- 756
Query: 144 SEVYRIWRSLRLAFPNTA---------------NIS-YLNMIQVLVNLKDLPGAEKCFKE 187
FP TA NIS Y+N+I+ LK AE
Sbjct: 757 -------------FPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGN 803
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
C T D +V N +I AYA G E A + R G P T
Sbjct: 804 LRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDT 850
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 119/250 (47%), Gaps = 2/250 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNV 61
++A + +KMKE ++ +N+L+ + G P + +++ M + ++ P+ TYN+
Sbjct: 147 DEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNI 206
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++A + A V+ +M G + D T++ +A Y + G EKAER + +++
Sbjct: 207 LIQAWCTKKKLEEAWNVLHKMVASG-IQPDVVTYNTMARAYAQNGETEKAERLILKMQYN 265
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ +I+ Y + GN++E R ++ + + + ++I+ ++ D G
Sbjct: 266 KVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGV 325
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ E D+ + ++ A++ G ++N EE+ + G +P+ + I +
Sbjct: 326 DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKG 385
Query: 242 YLRNGDMKLA 251
Y+R G + A
Sbjct: 386 YVRAGQPRKA 395
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 124/316 (39%), Gaps = 33/316 (10%)
Query: 25 NSLMTLYAKT---------GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
NS T++A+T G P + A+ + P TY + AL
Sbjct: 55 NSCQTVHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSI 114
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
++ ++ +G + D + + + + ++G ++A + ++++ S Y LI
Sbjct: 115 PALLSKVADNG-MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIK 173
Query: 136 LYGQTGNLSEVYRIWRSLRL---------AFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+G G R + S++L PN + +Y +IQ K L A
Sbjct: 174 GFGIVG------RPYESMKLLEMMGQDENVKPN--DRTYNILIQAWCTKKKLEEAWNVLH 225
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ + D+ N M AYA+ G E AE L + + PN +T I Y + G
Sbjct: 226 KMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEG 285
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
+M A+ L + + G P+ + ++ + D +G + L ++++
Sbjct: 286 NMTEALRFLYRMKELGVH------PNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKP 339
Query: 307 GVEVFEPLIRTYAAAG 322
V F ++ +++AG
Sbjct: 340 DVVTFSTIMNAWSSAG 355
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 126/325 (38%), Gaps = 14/325 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+A+A+ + E + + + +L+ + + IPA++ ++ + + PDS N
Sbjct: 77 HEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAM 136
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE--- 119
+ A + + A ++ ++MK G +T++ L + G+ + ++K LE
Sbjct: 137 INAFSDSGKVDEAMKIFQKMKEYG-CKPTTSTYNTLIKGF---GIVGRPYESMKLLEMMG 192
Query: 120 -NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ N + Y LI + L E + + + + ++Y M + +
Sbjct: 193 QDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGET 252
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
AE+ + + + R ++I Y KEG + A R + G PN +
Sbjct: 253 EKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSL 312
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
YL D + +++A+ G K P T T M + +D E
Sbjct: 313 IKGYLDATD----TNGVDEALTLMEEFGIK--PDVVTFSTIMNAWSSAGLMDNCEEIFND 366
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGR 323
+ KA + + + L + Y AG+
Sbjct: 367 MVKAGIEPDIHAYSILAKGYVRAGQ 391
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 97/240 (40%), Gaps = 3/240 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKAE L+ KM+ + + +++ Y K G+ + + MK + P+ +N
Sbjct: 252 TEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNS 311
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ D +G + + M+ G + D TFS + + + AGL + E ++
Sbjct: 312 LIKGYLDATDTNGVDEALTLMEEFG-IKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKA 370
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ AY L Y + G + + S+ T + + +I + A
Sbjct: 371 GIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRA 430
Query: 182 -EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
C K E G + +++ +I Y + + AEE+ RG P T ++ +D
Sbjct: 431 FSLCEKMHEMGTSP-NLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVAD 489
>gi|326507498|dbj|BAK03142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1043
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E++ +L KM+ L ++SL++L A+ G E + +EM+A I+P +YT
Sbjct: 297 LLEESMQVLGKMRMSRLVPEEATYSSLISLSARHGRGEHAVMLYEEMRAHGIVPSNYTCA 356
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ D S A + EM+R RV D + L IY + GL++ A+R +E++N
Sbjct: 357 SLLALYDKSEDYSKALSLFSEMERS-RVVIDEVIYGILIRIYGKIGLYDDAQRTFEEIDN 415
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y + ++ GN + S+R + SY ++++ V ++D+
Sbjct: 416 AGLLSDEQTYVAMAQVHMNAGNYDRALLVMGSMRSRNVTPSLFSYSSLLRCHVVMEDIAA 475
Query: 181 AEKCFKEWESGC--ATYDIRVTNVMIGAYAKEGRLENA 216
AE+ F+ C D+ N ++ Y K G+LE A
Sbjct: 476 AEEAFRAL---CKYGLPDVFCCNDLLRLYFKLGQLEKA 510
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L +MKE + + FNS++ YA +G + + QEM + +PDS TY
Sbjct: 838 QDASLLFNRMKEQGIMPGKISFNSMINAYATSGLHDDAEIVFQEMHSHGQVPDSMTYLAL 897
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+RA + S AE I+ M G + FS+L ++ G ++A+R +++
Sbjct: 898 IRAYSESRCYSKAEETIQNMLGSG-ITPSCPHFSHLIFAFLTEGQIDEAQRICSQMQEIG 956
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
DL+ + ++ Y + G + E ++ + R
Sbjct: 957 VAVDLACCRAMMRAYLEHGRVEEGISLFETTR 988
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 79/222 (35%), Gaps = 36/222 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA + +EL L + +++ Y K G + + MK IMP ++N
Sbjct: 803 EKATEMFTAAQELGLPIDEKLYTNMLNFYGKAGRHQDASLLFNRMKEQGIMPGKISFNSM 862
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A AE V +EM G+V D T+ L Y E+ + KAE ++ +
Sbjct: 863 INAYATSGLHDDAEIVFQEMHSHGQV-PDSMTYLALIRAYSESRCYSKAEETIQNMLGSG 921
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ LI + G + E RI
Sbjct: 922 ITPSCPHFSHLIFAFLTEGQIDEAQRI--------------------------------- 948
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
C + E G A D+ M+ AY + GR+E L E R
Sbjct: 949 -CSQMQEIGVAV-DLACCRAMMRAYLEHGRVEEGISLFETTR 988
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 91/246 (36%), Gaps = 1/246 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L KM + + + L+T K G ++ II + D+ YN +
Sbjct: 698 EEAYHLFMKMADQGHSRDVVTISILVTHLTKHGKFQEAENIIHGCFNGEVELDTVVYNTF 757
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++++ + A + + M G V TF+ + S+Y G EKA +
Sbjct: 758 IKSMLESGKLYSAASIYDRMIFSG-VPRSLQTFNIMISVYGLGGKLEKATEMFTAAQELG 816
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y ++ YG+ G + ++ ++ IS+ +MI AE
Sbjct: 817 LPIDEKLYTNMLNFYGKAGRHQDASLLFNRMKEQGIMPGKISFNSMINAYATSGLHDDAE 876
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E S D +I AY++ AEE + G P+ + +
Sbjct: 877 IVFQEMHSHGQVPDSMTYLALIRAYSESRCYSKAEETIQNMLGSGITPSCPHFSHLIFAF 936
Query: 243 LRNGDM 248
L G +
Sbjct: 937 LTEGQI 942
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 139/354 (39%), Gaps = 24/354 (6%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
EA LE M E + ++ +L+ YA+ G + + ++P +N + +
Sbjct: 194 EAFLE-MLEAGVEPDAVACGTLLCAYARRGRHGDMMLFYKATCRRGVVPPMSAFNFMLSS 252
Query: 66 LAAVNDISGAERVIE------EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
L + + G +VI EM+ V + T++ + +V+ GL E++ + L ++
Sbjct: 253 LQK-HRLHG--KVIHLWKHMMEMEEANNVVPNHFTYTVVIGSFVKEGLLEESMQVLGKMR 309
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ + Y LI+L + G ++ +R +N + +++ + +D
Sbjct: 310 MSRLVPEEATYSSLISLSARHGRGEHAVMLYEEMRAHGIVPSNYTCASLLALYDKSEDYS 369
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F E E D + ++I Y K G ++A+ E G + +T+ +
Sbjct: 370 KALSLFSEMERSRVVIDEVIYGILIRIYGKIGLYDDAQRTFEEIDNAGLLSDEQTYVAMA 429
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR-HFEQEKDVDGAEGFLEI 298
++ G+ A+ + G PS + + +R H E E F +
Sbjct: 430 QVHMNAGNYDRAL------LVMGSMRSRNVTPSLFSYSSLLRCHVVMEDIAAAEEAFRAL 483
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAICV 352
K + D V L+R Y G+ L M K ++ +L EA+C+
Sbjct: 484 CKYGLPD--VFCCNDLLRLYFKLGQLEKASAFILNMRKEDI-----QLDEALCM 530
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 132/373 (35%), Gaps = 75/373 (20%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N L+ LY K G EK A I M+ I D M I+ A+++++EM
Sbjct: 495 NDLLRLYFKLGQLEKASAFILNMRKEDIQLDEALCMTVMEVCCKSGMIADADKILKEMN- 553
Query: 85 DGRVAADWTTFSNLASIYVE--AGLFEKAERALKELENR------NA------------- 123
+G V +T ++ +Y + ++ + + K L R NA
Sbjct: 554 NGGVTMKSSTMVSMIEMYARNRTSVMQEQDTSPKALAYRTDSSALNATLKSLLDTPGGSS 613
Query: 124 ---------------------HRDL---------SAYQFLITLYGQTGNLSEVYRIWRSL 153
H L SA LI YGQ L + ++ S
Sbjct: 614 IACQLIRKFAREGSACVAKFLHEQLTELGVKPEDSATATLIVQYGQEQKLDQAEELFESA 673
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
+FP + Y M+ L + A F + + D+ ++++ K G+
Sbjct: 674 STSFPKGGPV-YNAMVDALCKCGKIEEAYHLFMKMADQGHSRDVVTISILVTHLTKHGKF 732
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 273
+ AE + + + + F L +G + A ++ I +G VP S
Sbjct: 733 QEAENIIHGCFNGEVELDTVVYNTFIKSMLESGKLYSAASIYDRMIFSG-------VPRS 785
Query: 274 ETIRTFMRHFEQEKDVDGAEGFLEI---LKKAVDDLGVEVFEPL----IRTYAAAGRT-- 324
++ F V G G LE + A +LG+ + E L + Y AGR
Sbjct: 786 ------LQTFNIMISVYGLGGKLEKATEMFTAAQELGLPIDEKLYTNMLNFYGKAGRHQD 839
Query: 325 SPVMLRRLKMEKV 337
+ ++ R+K + +
Sbjct: 840 ASLLFNRMKEQGI 852
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ F +++ YA GHP + I +EM A + P+ T+ + A A+ D++ + E
Sbjct: 422 VSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHER 481
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M G ++D +++L +Y + G A R + ++ +DL A+ +I Q+G
Sbjct: 482 MIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKT----KDLVAWTTIIAANVQSG 537
Query: 142 NLSEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
N ++ R L+ P+ A +S L + NL DL EK ++ D
Sbjct: 538 NNRAALDLYDRMLQSGIHPDIATLSTL--LVACANLGDLAMGEKIHRQALRSKLEQDAHF 595
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
N + YAK G LE A L R RG+D TW
Sbjct: 596 QNALAAMYAKCGSLEKATRLYRRC--RGSD--VATW 627
>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 426
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S I PD YN
Sbjct: 24 LFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V D ++S + ++YVE F +A +E+
Sbjct: 84 SMINVFGKAKLFKEARSLISEMRVAG-VMPDTVSYSTILTMYVENHKFLEALSVFREMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N DL+ +I +YGQ E R++ S+R +SY +++V + +
Sbjct: 143 INCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PNA T+
Sbjct: 203 AIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNAITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAMLFQKLRSSG 284
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A L+ DL AY +I ++G+ E + +R+A +SY ++
Sbjct: 63 AISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILT 122
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ V A F+E D+ N+MI Y + + A+ L R+ G +P
Sbjct: 123 MYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEP 182
Query: 231 NAKTWEIFSDYYLRNGDMKL 250
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + + +NS++ ++ K ++ ++I EM+ + +MPD+ +Y+ +
Sbjct: 62 KAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTIL 121
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ A V EM R+ D TT + + +Y + + ++A+R +
Sbjct: 122 TMYVENHKFLEALSVFREM-REINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGI 180
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y L+ +YG E ++R ++ ++Y M+ + + A
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E ++ + + +I + K G+L+ A L ++ R G + + ++ Y
Sbjct: 241 LIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYE 300
Query: 244 RNG 246
R G
Sbjct: 301 RAG 303
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +N++M +Y KT EK +IQEM+ I P++ TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNAITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI + +
Sbjct: 321 IPRDTA-----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYRKYTNVG 375
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F++ D V +++ AY K + A E+
Sbjct: 376 EVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANEV 412
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFERMIDLFSKYRKYTNVGEVFEKMRGLGY-FPDS------NVIALVLNAYGKL 403
Query: 176 KDLPGAEKCFKEWES-GCATYD 196
+ A + + E + GC D
Sbjct: 404 HEFDKANEVYMEMQDEGCVFPD 425
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 127/312 (40%), Gaps = 44/312 (14%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL++ Y++ G ++ I + M + I PD TYN + ALA AE++ EM+
Sbjct: 460 YVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEME 519
Query: 84 R-DGRVAADWTTFSNLASIYVEAGLFEK-------------------------------- 110
D R D ++S+L Y A +K
Sbjct: 520 NLDSR--PDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNN 577
Query: 111 ---AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 167
E+A EL R D++ +I++YG+ G + +V I ++ + N + +Y +
Sbjct: 578 LSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNS 637
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
++ + L D E E +S A D N MI AY ++G+++ A L + G
Sbjct: 638 LMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSG 697
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
P+ T+ IF Y+ N + A+D + + G P+ T T ++ +
Sbjct: 698 LVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHG------CKPNERTYNTILQEYCSHG 751
Query: 288 DVDGAEGFLEIL 299
+ + F+ L
Sbjct: 752 RIADGKSFISNL 763
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +K E +L MKE ++ S+ +NSLM +Y++ G EK I+ E+K+S PD Y+YN
Sbjct: 612 MVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYN 671
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ EMK G V D T++ YV +FE+A ++ +
Sbjct: 672 TMIYAYGRKGQMKEASRLFSEMKCSGLV-PDIVTYNIFVKSYVANSMFEEAIDLVRYMVT 730
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE 145
+ Y ++ Y G +++
Sbjct: 731 HGCKPNERTYNTILQEYCSHGRIAD 755
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++M++ S + +NSL++ Y K G E+ + +EM+ I PD TY
Sbjct: 299 DEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTL 358
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I A EM R+G + T++ L ++ G F + E+ +
Sbjct: 359 VSGLDRAGKIDAAIGTYNEMLRNG-CKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAG 417
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + L+ ++GQ G +EV +++ ++ + +Y+++I A
Sbjct: 418 FVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAM 477
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ +K DI N ++ A A+ GR E AE+L
Sbjct: 478 EIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKL 514
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 134/318 (42%), Gaps = 17/318 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWM 63
A A+ +M + + + +N ++ +Y+K P +++ A++ M+ I D YTYN +
Sbjct: 195 AVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSMRKDGIPLDRYTYNTLI 254
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +V +EM+ G D T ++L +Y +A +++A LKE+E
Sbjct: 255 SCCRRRALYKEAAKVFDEMRAAG-FEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGC 313
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI+ Y + G L E ++ + + I+Y ++ L + A
Sbjct: 314 PPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIG 373
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E +GC ++ N +I + G+ + + R G P+ TW +
Sbjct: 374 TYNEMLRNGCKP-NLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVF 432
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+NG ++ +G +VP +T + + + + D A +EI K+
Sbjct: 433 GQNGLDTEVSGVFKEMKKSG------YVPERDTYVSLISSYSRCGLFDQA---MEIYKRM 483
Query: 303 VDDLGVEVFEPLIRTYAA 320
+ + G+ P I TY A
Sbjct: 484 I-EAGI---HPDISTYNA 497
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 1/246 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A + ++M+ + NSL+ +Y K ++ +++EM+ P TYN
Sbjct: 262 LYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYN 321
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A ++ EEM+ G + D T++ L S AG + A E+
Sbjct: 322 SLISSYVKDGLLEEATQLKEEMEVKG-IEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLR 380
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+L Y LI L+G G E+ ++ +R A +++ ++ V
Sbjct: 381 NGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTE 440
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
FKE + + +I +Y++ G + A E+ +R G P+ T+
Sbjct: 441 VSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLS 500
Query: 241 YYLRNG 246
R G
Sbjct: 501 ALARGG 506
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 93/241 (38%), Gaps = 39/241 (16%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE--RVIEE 81
+ +L++ ++ A+ + M A+ + P TYNV + + + + E +++
Sbjct: 179 YTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIA-VPWKEVLALVDS 237
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M++DG + D T++ L S L+++A + E+ D L+ +YG+
Sbjct: 238 MRKDG-IPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKAR 296
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E I VL KE E G + N
Sbjct: 297 RYDEA----------------------IGVL-------------KEMEQGGCPPSVVTYN 321
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+I +Y K+G LE A +LKE +G +P+ T+ R G + A+ + +
Sbjct: 322 SLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRN 381
Query: 262 G 262
G
Sbjct: 382 G 382
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 9/251 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + FN+LM Y K G ++ + M AS + PD YTY+V +
Sbjct: 155 AQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A ++ +EM G V + TF+ L + + G + A K++ ++
Sbjct: 215 GLCKESKMDEAHKLFDEMLDRGLV-PNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y LI + G+L + + + + I+Y +I DL A
Sbjct: 274 PDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAF-- 331
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E+ +IR+ +V +I KEGR +AE++ G P+ T+ I
Sbjct: 332 --EYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMH 389
Query: 241 YYLRNGDMKLA 251
+ +NGD+K+
Sbjct: 390 EFCKNGDVKMG 400
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M +I A+ V + + + G + +F+ L + Y++ G ++ R
Sbjct: 137 YFFNILMDRFCKEGEIRLAQSVFDGITKWG-LRPSVVSFNTLMNGYIKLGDLDEGFRLKS 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
+ D+ Y LI + + E ++++ + R PN +++ +I
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
L A + +K+ S + D N +I K+G L A++L + +G P+ T
Sbjct: 254 NGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GD++ A +
Sbjct: 314 YTTLIDGSCKEGDLETAFE 332
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L ++M + L + + F +L+ + K G + I ++M + PD TYN
Sbjct: 223 DEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A+ + +EM G + D T++ L + G E A K + N
Sbjct: 283 IYGLCKKGDLXQAKDLXDEMSMKG-LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D +Y LI+ + G + ++ R +
Sbjct: 342 IRLDDVSYTALISGLCKEGRSVDAEKMLREM 372
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
++M + N+ + + +L++ K G +++EM + + PD+ TY + M
Sbjct: 335 KRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKN 394
Query: 70 NDISGAERVIEEMKRDGRVAA 90
D+ ++++EM+RDG V
Sbjct: 395 GDVKMGSKLLKEMQRDGHVPC 415
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+S+ ++ + L DL + + D+ +V+I KE +++ A +L +
Sbjct: 172 VSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDE 231
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
RG PN T+ D + +NG + LA++ ++ + G + P T T +
Sbjct: 232 MLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQG------FSPDXITYNTLIYG 285
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
++ D+ A K D++ ++ +P TY
Sbjct: 286 LCKKGDLXQA-------KDLXDEMSMKGLKPDKITYTT 316
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 5/256 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L +M+E L + + ++ + + G + + EM A +PD TYN
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L +S AE ++ EMK G V D TF+ L Y G EKA + + ++
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERG-VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI + G+L + +W + R FPN +++Y +I +
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPN--HVTYSILIDSHCEKGQVDN 492
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A E + +I N +I Y + G + ++ + R P+ T+
Sbjct: 493 AFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIH 552
Query: 241 YYLRNGDMKLAVDCLE 256
Y++ G M A + L+
Sbjct: 553 GYVKEGKMHEAFNLLK 568
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 142/340 (41%), Gaps = 13/340 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A AL++ M + + +NS++ + G +K + + M A + PD ++N+
Sbjct: 210 VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNM 269
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ++ A R +EM R RV D +FS L ++ G + A L+E+
Sbjct: 270 LIGGFCRAGELEEALRFYKEM-RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF 328
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPG 180
D Y +I + + G + E R+ R +AF + ++Y ++ L + L
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRV-RDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ E + D+ +I Y ++G +E A + + + P+ T+ D
Sbjct: 388 AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLID 447
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EIL 299
R GD+ A + + + P+ T + ++ VD A FL E++
Sbjct: 448 GMCRQGDLGKANELWDDM------HSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV 501
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTS--PVMLRRLKMEKV 337
K + + + +I+ Y +G S L +++ +KV
Sbjct: 502 NKGIVP-NIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L + M + + + ++ L+ + + G + A + EM I+P+ TYN +
Sbjct: 457 KANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ ++S ++ + +M+ D +V D T++ L YV+ G +A LK +EN N
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHD-KVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENV 575
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
D Y +I+ + GN+ E +++ + +Y++MI
Sbjct: 576 QPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMIN 622
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A A L++M + + M +NS++ Y ++G+ K + +M+ +MPD TYN
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNT 549
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A +++ M+ + V D T++ + S + G ++A+ K++ R
Sbjct: 550 LIHGYVKEGKMHEAFNLLKIMENEN-VQPDAVTYNMIISGFSVHGNMQEADWVYKKMGAR 608
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D Y +I + GN + +++
Sbjct: 609 GIEPDRYTYMSMINGHVVAGNSKKSFQL 636
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 105/269 (39%), Gaps = 9/269 (3%)
Query: 55 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
++YT N+ + + + VI EM++ V D T + + AG E A
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRC-VFPDVVTHNVMVDARFRAGDVEAAMAL 216
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQVLV 173
+ + ++ L Y ++ + G + ++R++ A ++ NM I
Sbjct: 217 IDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD-ACGVAPDVRSFNMLIGGFC 275
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+L A + +KE T D+ + +IG + + G +++A E R G P+
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
+ + + R G M A+ ++ + G +P T T + +E+ + AE
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFG------CLPDVVTYNTLLNGLCKERRLSDAE 389
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
L +K+ + F LI Y G
Sbjct: 390 ELLNEMKERGVPPDLCTFTTLIHGYCRDG 418
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 136/346 (39%), Gaps = 49/346 (14%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAEA+ +M++ L S++ +N+ + K G+P++ I Q MK P + TY
Sbjct: 198 LLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYT 257
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A ++ EM R + + T++ L + + GL EKAE ++L+
Sbjct: 258 LLINLHGKASQSYMALKLFNEM-RSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 316
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ AY L+ Y + G FP G
Sbjct: 317 DGHEPDVYAYNALMEAYSRAG---------------FPY--------------------G 341
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F + D N+M+ AY + G E+A+ + E +R G P K+ +
Sbjct: 342 AAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLS 401
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y + GD+ D + + ++G P + + + + + + E L ++
Sbjct: 402 AYSKAGDVAKCEDIVNELHESG------LEPDTFVLNSMLNLYGRLGQFGKMEEVLTAME 455
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKL 346
+ + LI Y AG KME + S A+K L
Sbjct: 456 SGPYATDISTYNILINIYGRAGFFE-------KMEGLFQSLAAKNL 494
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 7/248 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ +A+ G EK I ++++ PD Y YN M A + GA + M+
Sbjct: 291 YTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ 350
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G D +++ + Y GL E A+ +E++ + ++ L++ Y + G++
Sbjct: 351 HMG-CEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDV 409
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ I L + +M+ + L E+ ESG DI N++
Sbjct: 410 AKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNIL 469
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL---EKAID 260
I Y + G E E L + + P+ TW Y R KL CL E+ ID
Sbjct: 470 INIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRK---KLYTKCLEIFEEMID 526
Query: 261 TGRGDGGK 268
G G+
Sbjct: 527 AGCHPDGR 534
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 1/197 (0%)
Query: 50 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 109
SS D +N+ + A + AE E+ + R T++ L Y +GL E
Sbjct: 142 SSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELI-EARCIPTEDTYALLLKAYCTSGLLE 200
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
KAE E+ Y I + GN I++ ++ + +Y +I
Sbjct: 201 KAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLI 260
Query: 170 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
+ A K F E S +I ++ A+A+EG E AEE+ E+ + G +
Sbjct: 261 NLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHE 320
Query: 230 PNAKTWEIFSDYYLRNG 246
P+ + + Y R G
Sbjct: 321 PDVYAYNALMEAYSRAG 337
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK L +++E + + +N+L++ Y+ G E+ ++ M + P YTYN
Sbjct: 242 EKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTV 301
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ V EM R G ++ D TT+ +L + G + E ++ +R+
Sbjct: 302 INGLCKHGKYERAKEVFAEMLRSG-LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL + +++L+ ++GNL + + S++ A N+ Y +IQ + A
Sbjct: 361 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAM 420
Query: 183 KCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E + GCA D+ N ++ K L A++L RG P++ T I D
Sbjct: 421 NLRNEMLQQGCAM-DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDG 479
Query: 242 YLRNGDMKLAVDCLEK 257
+ + G+++ A++ +K
Sbjct: 480 HCKLGNLQNAMELFKK 495
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 3/252 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A L+ M +N+++ K G E+ + EM S + PDS TY
Sbjct: 275 LMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 334
Query: 61 VWMRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ D E + +M+ RD V D FS++ S++ +G +KA ++
Sbjct: 335 SLLMEACKKGDAVETENIFSDMRSRD--VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 392
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
D Y LI Y + G +SE + + ++Y ++ L K L
Sbjct: 393 EAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 452
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A+K F E D ++I + K G L+NA EL ++ + + + T+
Sbjct: 453 EADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLL 512
Query: 240 DYYLRNGDMKLA 251
D + + GD+ A
Sbjct: 513 DGFGKVGDIDTA 524
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 130/308 (42%), Gaps = 7/308 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+ E + M+ ++ + F+S+M+L+ ++G+ +K +K + ++PD+ Y + +
Sbjct: 348 ETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 407
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ IS A + EM + G A D T++ + + + +A++ E+ R
Sbjct: 408 QGYCRKGMISEAMNLRNEMLQQG-CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGL 466
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D LI + + GNL +++ ++ ++Y ++ + D+ A++
Sbjct: 467 FPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKE 526
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ + S ++++ A +G L A + + + P Y
Sbjct: 527 IWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYC 586
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
R+G+ LEK I G +VP + T + F +E+++ A G ++ +++
Sbjct: 587 RSGNASDGEIFLEKMISEG------FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640
Query: 304 DDLGVEVF 311
L +VF
Sbjct: 641 GGLVPDVF 648
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 9/240 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A+ L +M E L S L+ + K G+ + + ++MK I D TYN
Sbjct: 450 MLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYN 509
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ V DI A+ + +M + +FS L + G +A R E+ +
Sbjct: 510 TLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISFSILVNALCSKGHLSEAFRVWDEMIS 568
Query: 121 RNAHRDLSAYQFLITLYGQTGNLS--EVYRIWRSLRLAF-PNTANISYLNMIQVLVNLKD 177
++ + +I Y ++GN S E++ + + + F P+ ISY +I V ++
Sbjct: 569 KSIKPTVMICNSMIKGYCRSGNASDGEIF-LEKMISEGFVPDC--ISYNTLIYGFVKEEN 625
Query: 178 LPGAEKCFKEWE--SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ A K+ E G D+ N ++ + +E +++ AE + + RG +P+ T+
Sbjct: 626 MSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTY 685
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 93/238 (39%), Gaps = 1/238 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+L+ + G E I QE+ S + + YT N+ + AL + + E++
Sbjct: 194 NALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE 253
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V D T++ L S Y GL E+A + + ++ + Y +I + G
Sbjct: 254 KG-VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYE 312
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
++ + + + + +Y +++ D E F + S D+ + M+
Sbjct: 313 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMM 372
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ + G L+ A + G P+ + I Y R G + A++ + + G
Sbjct: 373 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 96/253 (37%), Gaps = 25/253 (9%)
Query: 70 NDISGAERVIEEMKRD-GRVAADWTTFSNLASIYVEAGLFEKAERALKELENR------- 121
ND+S +R ++++ + + S + I V +G A+ + + R
Sbjct: 80 NDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVE 139
Query: 122 ----------NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQ 170
N + S + LI + Q L E Y + LR + T +I N +I
Sbjct: 140 IVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLR-SKGYTVSIDACNALIG 198
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
LV + + A + ++E ++ N+M+ A K+G++E + +G P
Sbjct: 199 SLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYP 258
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
+ T+ Y G M+ A + + G G + I +H + E+
Sbjct: 259 DIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPG--VYTYNTVINGLCKHGKYER--- 313
Query: 291 GAEGFLEILKKAV 303
E F E+L+ +
Sbjct: 314 AKEVFAEMLRSGL 326
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + + + + L S + FN+LM Y K G ++ + M AS PD YTY+V +
Sbjct: 155 AQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + TF+ L + + G + A K++ ++
Sbjct: 215 GLCKESKMDEAHELFDEMLEKGLVP-NGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + + G+L + + + + I+Y +I DL A +
Sbjct: 274 PDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEY 333
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K+ D V +I KEGR +AE++ G P++ T+ I + + +
Sbjct: 334 RKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCK 393
Query: 245 NGDM 248
NGD+
Sbjct: 394 NGDV 397
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 5/206 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M +I A+ V + + + G + +F+ L + Y++ G+ ++ R
Sbjct: 137 YFFNILMHRFCKEGEIRLAQLVFDAITKWG-LKPSVVSFNTLMNGYIKMGILDEGFRLKN 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
+ A D+ Y LI + + E + ++ + + PN +++ +I
Sbjct: 196 AMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
L A + +K+ S + D+ N +I + K+G L+ +L + +G P+ T
Sbjct: 254 NGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAID 260
+ D + GD++ A + +K I+
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKKMIE 339
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
+KM E N+ + + +L++ K G +++EM + + PDS TY + M
Sbjct: 335 KKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKN 394
Query: 70 NDISGAERVIEEMKRDGRVAA 90
D++ ++++EM+RDG V +
Sbjct: 395 GDVNTGSKLLKEMQRDGHVPS 415
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L ++M E L + + F +L+ + K G + I +++ + + PD TYN
Sbjct: 223 DEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ +I+EM G + D T++ L + G E A K++ N
Sbjct: 283 IYGFCKKGDLKQTRDLIDEMSMKG-LKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D Y LI+ + G + ++ R +
Sbjct: 342 IRLDDVVYTALISGLCKEGRSVDAEKMLREM 372
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D+ +V+I KE +++ A EL + +G PN T+ D + +NG + LA++
Sbjct: 205 DVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIY 264
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
++ + G P T T + F ++ D L+ + +D++ ++ +P
Sbjct: 265 KQILSQGLS------PDLITYNTLIYGFCKKGD-------LKQTRDLIDEMSMKGLKPDK 311
Query: 316 RTYAA 320
TY
Sbjct: 312 ITYTT 316
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+T+ +LE MK + S+ +N+L+ +++K PEK A++Q M+A D TY
Sbjct: 299 LTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYT 358
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
M A + AE ++ EMKR G + ++ L S Y AG AER L+ ++N
Sbjct: 359 SVMEAYSRNKQPLMAESMMGEMKRAG-IQPGPVSYGVLISAYCRAGRLGDAERILRAMQN 417
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y +I+ Y S+ R++++++ +++ +I + + +
Sbjct: 418 AKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQ 477
Query: 181 AEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
AE C+ + GC + +++ AY +AE ++ R+ G
Sbjct: 478 AEDCYIRMQQLGCKPNAV-TYKILLKAYTDYNNSIDAERIRLDMRKAG 524
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L M ++ + P+ +L+ Y K G + + I++ MKAS + + YN
Sbjct: 267 EEAEKTLSDMLDVGI-VDDRPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTL 325
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A V++ M+ DG D T++++ Y AE + E++
Sbjct: 326 INIHSKAEAPEKARAVLQLMQADG-CQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAG 384
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+Y LI+ Y + G L + RI R+++ A Y MI + K AE
Sbjct: 385 IQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAE 444
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI----F 238
+ F+ + D N +I Y K + + AE+ R ++ G PNA T++I +
Sbjct: 445 RMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQAEDCYIRMQQLGCKPNAVTYKILLKAY 504
Query: 239 SDY 241
+DY
Sbjct: 505 TDY 507
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 96/262 (36%), Gaps = 35/262 (13%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA------------------ 68
L++ Y G P + +Q +A + PD+ Y + A A
Sbjct: 221 LISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVG 280
Query: 69 -VND---------------ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 112
V+D +++E MK G V A T ++ L +I+ +A EKA
Sbjct: 281 IVDDRPYAALVAAYGKAGLTDNVNKILETMKASG-VEASTTLYNTLINIHSKAEAPEKAR 339
Query: 113 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
L+ ++ D Y ++ Y + + ++ A +SY +I
Sbjct: 340 AVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAY 399
Query: 173 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
L AE+ + ++ + + N+MI YA AE + + + G P+A
Sbjct: 400 CRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDA 459
Query: 233 KTWEIFSDYYLRNGDMKLAVDC 254
T+ Y+++ K A DC
Sbjct: 460 VTFNTLISMYIKSRKRKQAEDC 481
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 102/274 (37%), Gaps = 42/274 (15%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
LE +LN S +NS + K G I + + + + PD +Y ++
Sbjct: 136 LEDDSQLN---SVKDYNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGK 192
Query: 69 VNDISGAERVIEEMKRDGRVAADW-------TTFSN------------------------ 97
+ + V M+R+ R D +T+ N
Sbjct: 193 LKSYNKVTDVFSRMQRN-RCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAI 251
Query: 98 ----LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
L Y + GL+E+AE+ L ++ + D Y L+ YG+ G V +I ++
Sbjct: 252 AYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD-RPYAALVAAYGKAGLTDNVNKILETM 310
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGR 212
+ + + Y +I + + A + ++ GC +I T+VM AY++ +
Sbjct: 311 KASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVM-EAYSRNKQ 369
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
AE + +R G P ++ + Y R G
Sbjct: 370 PLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAG 403
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 122/293 (41%), Gaps = 13/293 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LLEKM L + + +++L+ YA G E+ ++ M S + PD + YN +
Sbjct: 368 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 427
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L+ + A + E++ G + D TF Y + G +A + E+ +
Sbjct: 428 CLSKAGKMEEASTYLLEIQGRG-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 486
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + + GNL E I+R L P+ S I L+ + A
Sbjct: 487 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF--IHGLLKNGRVQEAL 544
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F E + D+ + +I + K+G +E A EL + +G PN + D
Sbjct: 545 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
++GD++ A + + G P S T T + + + ++V AE F
Sbjct: 605 CKSGDIQRARKLFDGMPEKG------LEPDSVTYSTMIDGYCKSENV--AEAF 649
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 119/292 (40%), Gaps = 11/292 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA +L+ M L +S F L+ Y + + + ++ EM+ +++P + +Y
Sbjct: 296 EKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 355
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+S A +++E+M G + + +S L Y G E+A R L +
Sbjct: 356 INGLCHCKDLSLANKLLEKMTFSG-LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 414
Query: 123 AHRDLSAYQFLITLYGQTGNLSE--VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y +I+ + G + E Y + R P+ +++ I +
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA--VTFGAFILGYSKTGKMTE 472
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K F E + + V+I + K G L A + G P+ +T F
Sbjct: 473 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 532
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
L+NG ++ A+ + + G VP T + + F ++ +V+ A
Sbjct: 533 GLLKNGRVQEALKVFSELKEKG------LVPDVFTYSSLISGFCKQGEVEKA 578
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 5/210 (2%)
Query: 22 MPFNSLMTL----YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
MP N L T+ + K G+ + +I + + A ++PD T + ++ L + A +
Sbjct: 486 MPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 545
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V E+K G V D T+S+L S + + G EKA E+ + ++ Y L+
Sbjct: 546 VFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 604
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
++G++ +++ + +++Y MI +++ A F E S
Sbjct: 605 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 664
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRG 227
V N ++ KEG +E A L ++G
Sbjct: 665 FVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 110/307 (35%), Gaps = 39/307 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L + M E L S+ +++++ Y K+ + + ++ EM + + P S+ YN
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670
Query: 63 MRALAAVNDISGAERVIEEMKRDG---------------------------------RVA 89
+ D+ A + EM + G ++
Sbjct: 671 VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 730
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D T++ + + +AG E+A KE++ RN D Y L+ Y + G SEV+ +
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
+ + ++Y +I +L A K E + +++I A K
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 850
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 269
L A +L + G P+ + G M A E G
Sbjct: 851 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG------L 904
Query: 270 VPSSETI 276
VP + T+
Sbjct: 905 VPDTTTL 911
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L ++M+E NL ++ + SLM Y K G ++ A+ ++M A + PD TY +
Sbjct: 750 EEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLV 809
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +++ A ++ +E+ G + T L + + +A + L E+
Sbjct: 810 IYAHCKEDNLVEAFKLRDEVVGKGML-TKGTIHDLLITALCKREDLTEASKLLDEMGELG 868
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIW---RSLRLAFPNTANISYLN 167
L+A L+ + + G + E R++ +SL L T I +N
Sbjct: 869 LKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 916
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
NV+I K G++E A E+ + G PN++T+ + + Y R +M A++ L++
Sbjct: 283 NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM-- 340
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
+ VPS+ + + KD+ A LE + + V V+ LI YA+
Sbjct: 341 ----EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 396
Query: 321 AGR 323
GR
Sbjct: 397 EGR 399
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 1/228 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NSL+ ++ G +++ + M PD++T+ + + L + A++++E M+
Sbjct: 1158 YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMR 1217
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G+ D T++ L + G E A + + L +R ++ +Y LI Y + +
Sbjct: 1218 HKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 1276
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +R + +R + ++Y +I L + A+K F E ++ + V+
Sbjct: 1277 DEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 1336
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
+ K G LE A +L + ++ PN + + I D R G ++ A
Sbjct: 1337 LDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 1384
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 129/322 (40%), Gaps = 8/322 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A L EKMK N + ++ K G + + EM + I+PD Y+
Sbjct: 1067 TGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSS 1125
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M L + A +EM+ G ++AD T+++L AGL+++ L + +R
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRG-ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 1184
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D + LI + G + E +I +R ++Y ++ L + L A
Sbjct: 1185 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDA 1244
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K F+ ++ N++I Y K+ +++ A E R +G P+ T+
Sbjct: 1245 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGA 1304
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
++G ++ A + + G+++ S T + + ++ A + +KK
Sbjct: 1305 LCQSGRVRTA-----QKLFVEMQTCGQFLKLS-TYCVLLDGLCKNGHLEEAMDLFQSIKK 1358
Query: 302 AVDDLGVEVFEPLIRTYAAAGR 323
+EVF L+ AG+
Sbjct: 1359 TEHKPNIEVFSILLDGMCRAGK 1380
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 1/229 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L E + + + + +N L+ Y K ++ +EM+ + P + TYN
Sbjct: 1242 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + A+++ EM+ G+ +T+ L + G E+A + ++
Sbjct: 1302 IGALCQSGRVRTAQKLFVEMQTCGQFLK-LSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ + L+ + G L E ++ + + I+Y +I L N L A
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 1420
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
K + E D NV+I KE + A +L E R R P+
Sbjct: 1421 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 99/269 (36%), Gaps = 14/269 (5%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA---GLFEK 110
PD+ T ++ + N I A ++ +EM + G + D T+ L + +A GL K
Sbjct: 1014 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKG-LLGDAKTYGILINGLCKARKTGLAIK 1072
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
+K N D+ Y +I + G +E ++ + A + Y +++
Sbjct: 1073 LHEKMKG----NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 1128
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
L L A + FKE E + D+ N +I ++ G + RG P
Sbjct: 1129 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 1188
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
+A T+ I D + G + A LE G+ P T T M ++
Sbjct: 1189 DAFTFTILIDGLCKEGKVGEAQQILELMRHKGKE------PDILTYNTLMNGLCLVGQLE 1242
Query: 291 GAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
A E L L V + LI Y
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNILINGYC 1271
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 88/233 (37%), Gaps = 3/233 (1%)
Query: 30 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 89
++ + G P+ + + EM ++ D+ TY + + L A ++ E+MK G
Sbjct: 1026 VWMENGIPDAV-QLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMK--GNCK 1082
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D T+ + + G+ +A E+ D+ Y L+ + G L E
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 1142
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
++ + + +Y ++I L + D ++I K
Sbjct: 1143 FKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCK 1202
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
EG++ A+++ E R +G +P+ T+ + G ++ A E D G
Sbjct: 1203 EGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 118/262 (45%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++ + E+MK+ + + +N+L+ + K K + EMKA+ + P+ TY+
Sbjct: 305 LLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYS 364
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ A + A + +M+R ++T +++L +AG +A + ++E+
Sbjct: 365 TFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT-YTSLIDANCKAGNLAEALKLVEEILQ 423
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y L+ + G + E ++R++ A +Y ++ + K++
Sbjct: 424 AGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEY 483
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ KE + C D+ + ++ E RLE A+ L + G + NA + D
Sbjct: 484 AKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMD 543
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y ++G A+ LE+ +D G
Sbjct: 544 AYFKSGQATEALTLLEEMLDLG 565
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 121/301 (40%), Gaps = 7/301 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A KM++ + N+L+ +K G + ++M A+ I +TYN
Sbjct: 200 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 259
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + L D+ A + +MK G D T+++L + + GL ++ +++++
Sbjct: 260 IMIDYLCKEGDLEMARSLFTQMKEAG-FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 318
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ Y LI + + + + + ++ ++Y I L
Sbjct: 319 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 378
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K F + T + +I A K G L A +L E + G N T+ D
Sbjct: 379 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 438
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
G MK A + ++ G P+ ET + F + K+++ A+ L+ +K
Sbjct: 439 GLCEEGRMKEAEEVFRAMLNAGVA------PNQETYTALVHGFIKAKEMEYAKDILKEMK 492
Query: 301 K 301
+
Sbjct: 493 E 493
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 99/239 (41%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F++L + + G E+ +M+ + P + N + L+ V + + ++M
Sbjct: 188 FDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMG 247
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + T++ + + G E A +++ D+ Y LI +G+ G L
Sbjct: 248 AAG-IKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLL 306
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E I+ ++ A + I+Y +I + +P A + E ++ ++ +
Sbjct: 307 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF 366
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I A+ KEG L+ A + RR PN T+ D + G++ A+ +E+ + G
Sbjct: 367 IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 102/263 (38%), Gaps = 3/263 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A M+ + L + + SL+ K G+ + +++E+ + I + TY
Sbjct: 375 MLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYT 434
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + AE V M G VA + T++ L +++A E A+ LKE++
Sbjct: 435 ALLDGLCEEGRMKEAEEVFRAMLNAG-VAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ DL Y ++ L E + ++ + NT + Y ++
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 553
Query: 181 AEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A +E + G ++ +I K G ++ A R G PN +
Sbjct: 554 ALTLLEEMLDLGLIATEVTYC-ALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
D +N ++A ++ +D G
Sbjct: 613 DGLCKNNCFEVAKKLFDEMLDKG 635
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 98/231 (42%), Gaps = 13/231 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A+ L+ ++KE + +++ + +LM Y K+G + +++EM ++ TY
Sbjct: 517 EEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTY--- 573
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVA-----ADWTTFSNLASIYVEAGLFEKAERALKE 117
A ++ + + V E M GR++ + ++ L + FE A++ E
Sbjct: 574 ---CALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDE 630
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLK 176
+ ++ D AY LI + GNL E + R + + + +Y +I L +
Sbjct: 631 MLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLH-AYTALIWGLSHSG 689
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+ A E D V +I Y G+++ A EL+ +RG
Sbjct: 690 QVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 150/371 (40%), Gaps = 44/371 (11%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A L+ KM+E S + FN L+ +K G ++ +IQEM + + YTYN
Sbjct: 253 VQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNP 312
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A + EEM G V+ + + + + + G A + L ++ +
Sbjct: 313 LICGYCKKGLLVEALALWEEMVTRG-VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKK 371
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N D+ +Y LI + + GN+ E + + LR + ++Y +I L L DL A
Sbjct: 372 NLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETA 431
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE----------------------- 218
K ++ + D+ V++ K G + A+E
Sbjct: 432 LKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVG 491
Query: 219 ------------LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
L+E +G P+ T+ +F + + G+++ A + L+K I G
Sbjct: 492 ELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH--- 548
Query: 267 GKWVPSSETIRTFMR-HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
VP T +FM H E +G E F ++L + V + LI +A GR
Sbjct: 549 ---VPDHVTYTSFMHAHMENGHLREGREIFYDMLSRG-QTPTVVTYTVLIHAHALNGRLD 604
Query: 326 PVMLRRLKMEK 336
M L+M++
Sbjct: 605 WAMAYFLEMQE 615
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 119/261 (45%), Gaps = 5/261 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA + M E + + +N+++ + K G ++ ++ +M+ P T+NV +
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L+ ++ A+ +I+EM + G + + T++ L Y + GL +A +E+ R
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPY-TYNPLICGYCKKGLLVEALALWEEMVTRGV 338
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
++++ ++ + + G +S+ + + + P+ ISY +I L ++ A
Sbjct: 339 SPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDI--ISYNTLIYGFCRLGNIGEA 396
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E +++I N +I + G LE A +LKE RG P+ T+ + +
Sbjct: 397 FILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNG 456
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ G+M +A + ++ + G
Sbjct: 457 ACKLGNMLMAKEFFDEMLHVG 477
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 12/245 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ ++M + L + + + K G K + +EM PD TYNV++
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVN 525
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + ++ A ++++M RDG V D T+++ ++E G + ++ +R
Sbjct: 526 GLCKLGNLEEAGELLQKMIRDGHV-PDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQT 584
Query: 125 RDLSAYQFLITLYGQTGNL--SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + G L + Y + + PN I+Y +I ++ + A
Sbjct: 585 PTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNV--ITYNVLINGFCKVRKMDQAC 642
Query: 183 KCFKEW-ESGC----ATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
K F E E G TY I + N +G + + RL A+ L +R R A +
Sbjct: 643 KFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY-AQMLGKRIRPDSCTHGALLKK 701
Query: 237 IFSDY 241
+ DY
Sbjct: 702 LDKDY 706
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 1/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ LM + K E + +++EM+A + P+ Y+Y + +R L A R++ EM+
Sbjct: 277 YSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEME 336
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T + L + +AG A+ +++ + D Y L+ + G
Sbjct: 337 NEG-CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGES 395
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
V IW +++ N ++Y +I L + + A + F E + + N +
Sbjct: 396 QSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSL 455
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
I + K R +A EL + G PN T +F +YY ++G+
Sbjct: 456 ISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGE 499
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 108/292 (36%), Gaps = 7/292 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE L +MKEL G +N L+ K+ E++ + +EM TYN
Sbjct: 849 LIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYN 908
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A + + G + T+ L ++AG E AE E+
Sbjct: 909 TIISGLVKSRRLEQAIDLYYNLMSQG-FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLE 967
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + Y L+ + GN +V +++ + N SY +I L L
Sbjct: 968 YGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLND 1027
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F++ D+ N++I K RLE A L +++G PN T+
Sbjct: 1028 GLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLIL 1087
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+ + G A E+ + G W P+ T +R + D A
Sbjct: 1088 HLGKAGKAAEAGKMYEELLTKG------WKPNVFTYNALIRGYSVSGSTDSA 1133
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 93/238 (39%), Gaps = 39/238 (16%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
G++ + F + Y K+G K + MK+ I+PD N + LA + A+R
Sbjct: 484 GYTHVLF---INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 540
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V E+K G V+ D T++ + +A F++A + ++ N D+ LI
Sbjct: 541 VFHELKAMG-VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTL 599
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
+ G E ++I+ L+ +NL+ G TY
Sbjct: 600 YKAGRGDEAWQIFYQLK-----------------EMNLEPTDG-------------TY-- 627
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
N ++ +EG+++ L E PN T+ D +NG + A+D L
Sbjct: 628 ---NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 682
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 41/221 (18%), Positives = 92/221 (41%), Gaps = 3/221 (1%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++++ K+ + + +YN + L N I AE + EMK G D T++ L
Sbjct: 821 LVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG-CGPDEFTYNLLLDAM 879
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
++ E+ + +E+ + Y +I+ ++ L + ++ +L +
Sbjct: 880 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 939
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+Y ++ L+ + AE F E E GC + + N+++ + G E L +
Sbjct: 940 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKA-NCTIYNILLNGHRIAGNTEKVCHLFQ 998
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+G +P+ K++ I D + G + + + ++ G
Sbjct: 999 DMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG 1039
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 79/193 (40%), Gaps = 3/193 (1%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+++ AK+G + E+KA + PD+ TY + ++ + + A ++ +M
Sbjct: 523 NAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIE 582
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
+ V D ++L +AG ++A + +L+ N Y L+ G+ G +
Sbjct: 583 NNCV-PDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVK 641
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVM 203
EV + + + I+Y ++ L + A + + GC D+ N +
Sbjct: 642 EVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIP-DLSSYNTV 700
Query: 204 IGAYAKEGRLENA 216
I KE R A
Sbjct: 701 IYGLVKEERYNEA 713
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 84/223 (37%), Gaps = 1/223 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N ++ L G + + M+ + + T+ L + A + MK
Sbjct: 173 NYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKE 232
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V +T ++ L V++G +A K + + Y L+ +G+ ++
Sbjct: 233 AGIVLNAYT-YNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVE 291
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
V + R + SY I+VL + A + E E+ D+ V+I
Sbjct: 292 TVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLI 351
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
GR+ +A+++ + ++ P+ T+ D + NG+
Sbjct: 352 QVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGE 394
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 116/281 (41%), Gaps = 37/281 (13%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A + + ++ G + ++++++ Y ++G + + Q MK + P+ TYN
Sbjct: 216 VEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNT 275
Query: 62 WMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A D+ A + +EM+++G V D TF++L ++ GL+E ++R E++
Sbjct: 276 IIDACGKGGVDLKQALDIFDEMQKEG-VEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQR 334
Query: 121 RNAHRDL-----------------------------------SAYQFLITLYGQTGNLSE 145
R +D+ Y +I YG+ G E
Sbjct: 335 RGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEE 394
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++ ++ + +SY +I + L A K+ E D+ N +I
Sbjct: 395 AISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALID 454
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
AY K+G+ ++A L ++ + G PN T+ D Y + G
Sbjct: 455 AYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAG 495
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 5/246 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E ++ + +M+ + FN+L+ K G E +I+ M+ +I P+ TY+
Sbjct: 323 EDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTM 382
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + +MK G V D +++ L IY + G F+ A A K++E
Sbjct: 383 IDGYGKLGCFEEAISLYHDMKESG-VRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI YG+ G + ++ ++ PN ++Y +I
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNV--LTYSALIDSYSKAGMHQD 499
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F E++ D+ + + +I + K G +E+A L + + G PN T+ D
Sbjct: 500 VSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLID 559
Query: 241 YYLRNG 246
Y R G
Sbjct: 560 AYGRYG 565
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A +++ M+ N+ + + +++++ Y K G E+ ++ +MK S + PD +YN
Sbjct: 358 ELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTL 417
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + A ++M+R G + AD T++ L Y + G ++ A +++
Sbjct: 418 IDIYAKLGRFDDALIACKDMERVG-LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEG 476
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ Y LI Y + G +V ++ + A + Y ++I + A
Sbjct: 477 LVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAV 536
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 220
+E +I N +I AY + G+ + E +K
Sbjct: 537 VLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVK 574
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 134/331 (40%), Gaps = 39/331 (11%)
Query: 17 LGFSSMPFNSLMTLYAKTGHP----EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 72
L S P NS L K H E P +++E+ W RAL
Sbjct: 139 LSAPSTPLNSTALLLEKWSHQLVGLEDFPYLLRELG---------NRGEWERAL------ 183
Query: 73 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEA-GLFEKAERALKELENRNAH----RDL 127
G E +++++ + ++W S LASI + G K E AL ++ NR ++
Sbjct: 184 QGYEWMVQQV----HLRSEW---SKLASIMISTLGRLGKVEIAL-DVFNRAQKAGFGNNV 235
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK-DLPGAEKCFK 186
AY +++ YG++G E +++++++ A I+Y +I DL A F
Sbjct: 236 YAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFD 295
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E + D N +I ++ G E+++ + +RRG + + T+ D + G
Sbjct: 296 EMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGG 355
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
M+LA + T RG P+ T T + + + + A +K++
Sbjct: 356 QMELAASIMT----TMRGK--NISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRP 409
Query: 307 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+ LI YA GR ++ ME+V
Sbjct: 410 DRVSYNTLIDIYAKLGRFDDALIACKDMERV 440
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 9/264 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A + L +M + L S P+NSL+ + K G + EM + P TY
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M + I+ A R+ EM G +A TF+ L S AGL A + E+ N
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKG-IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y +I Y + G++S+ + + + + P+T SY +I L L
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT--YSYRPLIHGLC-LTGQAS 594
Query: 181 AEKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K F + + C +I T ++ G + +EG+LE A + + +RG D + + +
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHG-FCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTG 262
D L++ D KL L++ D G
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRG 677
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 126/310 (40%), Gaps = 20/310 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ A L +M E N+ + + +N ++ Y + G K ++EM I+PD+Y+Y
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L S A+ ++ + + G + ++ L + G E+A +E+
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHK-GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R DL Y LI + + + + + + ++ Y +MI D
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 181 AEKCFKEWE----SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A F W+ GC ++ T V I K G + AE L + + + PN T+
Sbjct: 701 A---FGIWDLMINEGCVPNEVTYTAV-INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 237 IFSDYYLRNG-DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
F D + DM+ AV+ L AI G + ++ T +R F ++ ++ A
Sbjct: 757 CFLDILTKGEVDMQKAVE-LHNAILKG------LLANTATYNMLIRGFCRQGRIEEAS-- 807
Query: 296 LEILKKAVDD 305
E++ + + D
Sbjct: 808 -ELITRMIGD 816
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 15/290 (5%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
+ +M + I PD Y Y +R+L + D+S A+ +I M+ G + ++ L
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG-CDVNIVPYNVLIDGL 272
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPN 159
+ +A K+L ++ D+ Y L+ + E+ LR + P+
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFS-PS 331
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
A +S ++++ L + A K + ++ V N +I + K + AE L
Sbjct: 332 EAAVS--SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 279
+R + G PN T+ I D + R G + A+ L + +DTG S +
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG------LKLSVYPYNSL 443
Query: 280 MRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 328
+ + D+ AEGF+ E++ K ++ V + L+ Y + G+ + +
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPT-VVTYTSLMGGYCSKGKINKAL 492
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 86/228 (37%), Gaps = 1/228 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
LL++M + L + + S++ +KTG ++ I M +P+ TY + L
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
++ AE + +M+ V + T+ I + + + L + +
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVP-NQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLAN 786
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y LI + + G + E + + + I+Y MI L D+ A + +
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
D N +I G + A EL+ R+G PN KT
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 109/263 (41%), Gaps = 2/263 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA L E M ++ ++ F +L+ Y + G E ++ MK + P+ TYN
Sbjct: 89 MLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYN 148
Query: 61 VWMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ A A + G + +M+ +G + D T++ L S GL E+A + +
Sbjct: 149 TVINACAKGGLEWEGLLGLFAQMRHEG-IQPDIITYNTLLSACSSRGLVEEAGMVFRTMN 207
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
D Y L+ +YGQ V + R + A ++Y +I+
Sbjct: 208 EAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYR 267
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A K FK+ + T D+ + ++ AY K G + L + RG +P+ T+
Sbjct: 268 AAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLI 327
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
+ + G + +++ +D G
Sbjct: 328 QVFGQGGFFQESINLFWDLLDGG 350
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 95/247 (38%), Gaps = 38/247 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A + M E + S+ +N+L+ +Y + E + +++EM+ + PD YN
Sbjct: 195 LVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYN 254
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A ++ ++M+ G D TFS L Y + G +++ +++
Sbjct: 255 ILIEAYGRAGKYRAAAKMFKQMQEAG-CTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKE 313
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE----------------------------------- 145
R D++ Y LI ++GQ G E
Sbjct: 314 RGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKA 373
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMI 204
+I R + ++ + +I N A F ESGC D+ N +I
Sbjct: 374 AKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKP-DLETYNALI 432
Query: 205 GAYAKEG 211
GA+A G
Sbjct: 433 GAHAGGG 439
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 1/164 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F L+T Y + MK S PD TYN + A A A M
Sbjct: 393 FTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMI 452
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G ++AD +T+++L + GLF+ A +++E + Y+ L+ +Y G
Sbjct: 453 DEG-ISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLF 511
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
E + L++ + SY ++ V A K +E
Sbjct: 512 DEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEE 555
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 139/356 (39%), Gaps = 34/356 (9%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++LM + I +++EM+ + P+ YTY + +R L I A +++ M+
Sbjct: 230 YSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTME 289
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T++ L AG +KA+ ++ + DL Y L++ +G G+L
Sbjct: 290 DEG-CGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDL 348
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
V R W + ++Y +++ L + A ++ N +
Sbjct: 349 ETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTL 408
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA----- 258
I RL+ A EL G P A ++ +F DYY + GD + A+D EK
Sbjct: 409 ISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGI 468
Query: 259 --------------IDTGRGDGGKWV----------PSSETIRTFMRHFEQEKDVDGAEG 294
+ GR K + P S T M+ + + +D A
Sbjct: 469 MPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATK 528
Query: 295 FL-EILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
L E+L + + + V LI T AGR M RLK K+ + + +L
Sbjct: 529 LLTEMLSEGCEP-DIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNIL 583
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 36/250 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L M+ L + ++ + + Y K G PEK ++MK IMP N
Sbjct: 419 DEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNAS 478
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +LA + I A+ + ++ G ++ D T++ + Y +AG +KA + L E+ +
Sbjct: 479 LYSLAEMGRIREAKDIFNDIHNCG-LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEG 537
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ LI + G + E ++++ L+ +LK P
Sbjct: 538 CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLK-------------------DLKLAPTV- 577
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
TY N++I KEG+L A +L + G PN T+ D
Sbjct: 578 ----------VTY-----NILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCL 622
Query: 243 LRNGDMKLAV 252
+N + LA+
Sbjct: 623 CKNDAVDLAL 632
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+TE A L +MK + +N L+ + K+ +++ + EM P+ T+N
Sbjct: 803 ITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHN 862
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + AL N I+ A + E+ G + T+ L ++AG E+A + +E+ +
Sbjct: 863 IIISALVKSNSINKALDLYYEI-ISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPD 921
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + Y LI +G+ GN++ +++ + SY +++ L +
Sbjct: 922 YQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDD 981
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A F+E + D N+MI K RLE A L + RG P T+
Sbjct: 982 AVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTY 1036
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 3/261 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A +L+ M++ G + + L+ G +K + +M+ASS PD TY
Sbjct: 279 DDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITL 338
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M D+ +R EM+ DG A D T++ L ++G ++A L + R
Sbjct: 339 MSKFGNYGDLETVKRFWSEMEADG-YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGA 181
+L Y LI+ L E ++ ++ L TA SY+ I L D A
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTA-YSYVLFIDYYGKLGDPEKA 456
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F++ + I N + + A+ GR+ A+++ G P++ T+ +
Sbjct: 457 LDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKC 516
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y + G + A L + + G
Sbjct: 517 YSKAGQIDKATKLLTEMLSEG 537
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 1/210 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA EKMK+ + S N+ + A+ G + I ++ + PDS TYN+
Sbjct: 454 EKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMM 513
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ + I A +++ EM +G D ++L +AG ++A + L++
Sbjct: 514 MKCYSKAGQIDKATKLLTEMLSEG-CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLK 572
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LIT G+ G L + ++ S++ + +++ ++ L + A
Sbjct: 573 LAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLAL 632
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
K F + D+ N +I KEGR
Sbjct: 633 KMFCRMTIMNCSPDVLTYNTIIYGLIKEGR 662
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 90/219 (41%), Gaps = 3/219 (1%)
Query: 19 FSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 76
FS P + L+ K G E+ I +EM P+ YN+ + +++ A
Sbjct: 889 FSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIAC 948
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
+ + M ++G + D +++ L G + A +EL+ D +Y +I
Sbjct: 949 DLFKRMIKEG-IRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMING 1007
Query: 137 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 196
G++ L E ++ ++ + +Y +I N + A K F+E + +
Sbjct: 1008 LGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPN 1067
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ N +I ++K G + A + ++ G PNA T+
Sbjct: 1068 VFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 88/215 (40%), Gaps = 1/215 (0%)
Query: 48 KASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 107
K+ P +YN M L N A ++ EMK G + T++ L + ++
Sbjct: 780 KSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAG-CCPNIFTYNLLLDAHGKSKR 838
Query: 108 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 167
++ E+ R ++ + +I+ ++ ++++ ++ + + +Y
Sbjct: 839 IDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGP 898
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+I L+ A K F+E + + N++I + K G + A +L +R + G
Sbjct: 899 LIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEG 958
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
P+ K++ I + G + AV E+ TG
Sbjct: 959 IRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 141/356 (39%), Gaps = 42/356 (11%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LEKM+++ + + L+ L K+G + + + M + I P TY+ M
Sbjct: 175 EAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALM 234
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
AL DI +++EM+ G + + TF+ I AG ++A LK +++
Sbjct: 235 VALGKRRDIETVMGLLQEMESLG-LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGC 293
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y LI G L+ ++ ++ + ++Y+ ++ + DL ++
Sbjct: 294 GPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKE 353
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN------------ 231
+ E E+ D+ ++I A K G+++ A + +++G PN
Sbjct: 354 FWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLL 413
Query: 232 -----------------------AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
A T+ +F DYY ++G+ A+ EK G
Sbjct: 414 RLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNG------ 467
Query: 269 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
VP+ + ++ ++ A+ F LKK + L+R Y AGR
Sbjct: 468 IVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRV 523
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++M + G + + L+ G + +MKASS PD TY
Sbjct: 279 DEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITL 338
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + D+ + EM+ DG + D TF+ L + G ++A L ++ +
Sbjct: 339 LDKFSDHGDLDAIKEFWSEMEADGYLP-DVVTFTILIDALCKVGKVDEAFGTLDVMKKQG 397
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+L Y LI + L E ++ S+ T +Y+ I + A
Sbjct: 398 VAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAI 457
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F++ ++ +I N + + A++GRLE A+E ++ G P+A T+ I Y
Sbjct: 458 KTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCY 517
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G + A+ L + + G
Sbjct: 518 GKAGRVDDAIKLLSEMEENG 537
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 98/235 (41%), Gaps = 1/235 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+TE A L KMK +N + K+G +++ + +EM P++ T+N
Sbjct: 803 LTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHN 862
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + L N + A + ++ W T+ L ++ G E+A++ +E+ +
Sbjct: 863 IVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPW-TYGPLIDGLLKLGRLEEAKQFFEEMLD 921
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y L+ +G+ G++ ++R + SY M+ L + +
Sbjct: 922 YGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDD 981
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A F+E + D+ N+MI + R+E A L + R RG P+ T+
Sbjct: 982 ALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTY 1036
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 114/289 (39%), Gaps = 39/289 (13%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A AL + M + +++ FN+L+ K G + ++ M + PD TYN
Sbjct: 593 VQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNT 652
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE-LEN 120
+ L N ++ A + +MK+ + D+ T L ++ G E A R KE + +
Sbjct: 653 VIYGLIKENRVNYAFWLFHQMKK--VIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHH 710
Query: 121 RNAHRDLSAYQ-----------------------------------FLITLYGQTGNLSE 145
H D S ++ L+ + G +
Sbjct: 711 VGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVD 770
Query: 146 VYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
Y ++ L +F T ++ +Y ++I L+ + A F + ++ T D+ N+ +
Sbjct: 771 AYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFL 830
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
A K G+++ +L E RG PN T I +++ + A+D
Sbjct: 831 DALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAID 879
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 115/302 (38%), Gaps = 44/302 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L M+ L L ++ + + Y K+G K ++MK + I+P+ N
Sbjct: 419 DEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNAS 478
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +LA + A+ +K+ G +A D T++ L Y +AG + A + L E+E
Sbjct: 479 LYSLAEQGRLEEAKEFFNGLKKCG-LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG 537
Query: 123 AHRDLSAYQFLI-TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ LI TLY V W+ M Q + +K P
Sbjct: 538 CDPEVVIINSLIDTLY----KADRVDEAWK----------------MFQRMKEMKLAPTV 577
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
TY N ++ KEGR++ A L + PN ++ D
Sbjct: 578 -----------VTY-----NTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDC 621
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+NG++ LA+ L + + P T T + +E V+ A +KK
Sbjct: 622 LCKNGEVDLALKMLFRMTEM------NCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKK 675
Query: 302 AV 303
+
Sbjct: 676 VI 677
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 9/157 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 58
E+A+ E+M L + MP +N LM + K G E + + M I PD +
Sbjct: 910 EEAKQFFEEM----LDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS 965
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
Y++ + L V + A EE+K G + D ++ + + + E+A E+
Sbjct: 966 YSIMVDCLCMVGKVDDALHYFEELKLSG-LDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 155
NR DL Y LI G G + E +++ L+L
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQL 1061
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 44 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 103
+E+K S + PD YN+ + L + A + +EM+ G + D T++ L
Sbjct: 986 FEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG-ITPDLYTYNALILNLG 1044
Query: 104 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNTA 161
AG+ E+A + +EL+ + ++ Y LI + +GN Y +++ + + PNT
Sbjct: 1045 IAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTG 1104
Query: 162 NISYL 166
+ L
Sbjct: 1105 TFAQL 1109
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 75 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
A V ++ + + +++L ++A L E A +++N D+ Y +
Sbjct: 771 AYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFL 830
Query: 135 TLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
G++G + E++ ++ + R PNT I++ +I LV L A + + SG
Sbjct: 831 DALGKSGKIKELFDLYEEMLFRGCKPNT--ITHNIVIFGLVKSNSLDKAIDLYYDLMSGD 888
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
+ +I K GRLE A++ E G PN + I + + + GD++ A
Sbjct: 889 FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETAC 948
Query: 253 DCLEKAIDTG 262
+ + + G
Sbjct: 949 ELFRRMVKEG 958
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 88/220 (40%), Gaps = 42/220 (19%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NSL+ K E + +MK + PD +TYN+++ AL I + EEM
Sbjct: 791 YNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM- 849
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG--QTG 141
LF + N H I ++G ++
Sbjct: 850 -----------------------LFRGCK------PNTITHN--------IVIFGLVKSN 872
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVT 200
+L + ++ L + +Y +I L+ L L A++ F+E + GC + +
Sbjct: 873 SLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMP-NCPLY 931
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
N+++ + K+G +E A EL R + G P+ K++ I D
Sbjct: 932 NILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVD 971
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 1/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ LM + K E + ++ EM+A + P+ Y+Y + +R L + A R++ +M+
Sbjct: 209 YSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKME 268
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T + L I +AG A+ +++ + D Y L+ G +G+
Sbjct: 269 EEG-CKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDS 327
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
V IW +L+ N +SY + L + + A F E + N +
Sbjct: 328 RSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSL 387
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
I + K R A EL G PN T +F +Y+ ++G+
Sbjct: 388 ISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 6/237 (2%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+++ AKTG + E+KA I PD+ TY + ++ + ++ A ++ EM
Sbjct: 455 NAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIE 514
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
+ R A D ++L + +AG +A + EL+ N Y L+ G+ G +
Sbjct: 515 N-RCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVK 573
Query: 145 EVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNV 202
EV ++ + +FP I+Y ++ L ++ A + + +GC D+ N
Sbjct: 574 EVMQLLEGMNSNSFPPNI-ITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMP-DLSSYNT 631
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
++ KEGRL+ A + + ++ A A I ++R+G MK A+ + + I
Sbjct: 632 VMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPS-FVRSGLMKEALHTVREYI 687
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 85/227 (37%), Gaps = 17/227 (7%)
Query: 18 GFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
GFS P + L+ K G+ E A+ EM P+ YN+ + D
Sbjct: 866 GFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKV 925
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
+ E M G + D +++ + G K+L + DL Y LI
Sbjct: 926 CELFESMVEQG-MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIH 984
Query: 136 LYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-----W 188
G++G L E ++ + + PN +Y ++I L A K ++E W
Sbjct: 985 GLGKSGRLEEALSLYNDMEKKGIAPNL--YTYNSLILYLGKAGKAAEAGKMYEELLAKGW 1042
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ TY N +I Y+ G ENA R G PN+ T+
Sbjct: 1043 KPNVFTY-----NALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 104/283 (36%), Gaps = 7/283 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE L +MK L ++ ++ K+ E + I +EM TYN
Sbjct: 781 LIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYN 840
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A + ++ +G + T+ L ++ G E AE E+
Sbjct: 841 TIISGLVKSKMLDEAINLYYQLMSEG-FSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + Y L+ Y G+ +V ++ S+ N SY +I L L
Sbjct: 900 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
FK+ D+ N++I K GRLE A L ++G PN T+
Sbjct: 960 GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
Y + G A E+ + G W P+ T +R +
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKG------WKPNVFTYNALIRGY 1056
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 109/296 (36%), Gaps = 42/296 (14%)
Query: 32 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 91
+ G ++ + EMK I+P Y+YN + + + A + M G
Sbjct: 357 CQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNG 416
Query: 92 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
+T + + ++G KA + + ++++ D+ A ++ +TG L R++
Sbjct: 417 YTHVL-FINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFH 475
Query: 152 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCAT---------------- 194
L+ + NI+Y MI+ + A K F E E+ CA
Sbjct: 476 ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAG 535
Query: 195 ---------YDIR---------VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
Y+++ N ++ +EG+++ +L E PN T+
Sbjct: 536 RGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYN 595
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
D +NG++ A+D L G +P + T M +E +D A
Sbjct: 596 TVLDCLCKNGEVNYALDMLYSMTMNG------CMPDLSSYNTVMYGLVKEGRLDEA 645
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 7/264 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA--IIQEMKASSIMPDSYTY 59
TEK+ E + L + + ++ + K H E + A ++++ + + + +Y
Sbjct: 712 TEKSIEFAENIASSGLLLDDLFLSPIIRHFCK--HKEALAAHELVKKFENLGVSLKTGSY 769
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N + L + I AE + EMKR G D T+ + ++ E + +E+
Sbjct: 770 NALICGLVDEDLIDIAEELFSEMKRLG-CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 828
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N+ Y +I+ ++ L E ++ L + +Y ++ L+ ++
Sbjct: 829 NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 888
Query: 180 GAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
AE F E E GC + + N+++ Y G E EL E +G +P+ K++ +
Sbjct: 889 DAEALFDEMLECGCEP-NCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVV 947
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTG 262
D +G + + ++ D G
Sbjct: 948 IDTLCADGRLNDGLSYFKQLTDMG 971
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 96/238 (40%), Gaps = 1/238 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
+SLM K EK + + +S ++ D + +R + A ++++ +
Sbjct: 700 HSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFEN 759
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V+ +++ L V+ L + AE E++ D Y ++ G++ +
Sbjct: 760 LG-VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIE 818
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
++ +I + + ++Y +I LV K L A + + S + ++
Sbjct: 819 DMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLL 878
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
K+G +E+AE L + G +PN + I + Y GD + + E ++ G
Sbjct: 879 DGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 137/316 (43%), Gaps = 13/316 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM- 82
+N+L+ K GH + ++ M + PD YTYN + L + +I A +++++M
Sbjct: 311 YNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMV 370
Query: 83 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 142
RD + + T++ + S + ++A + L ++ D+ + LI + N
Sbjct: 371 SRD--CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN 428
Query: 143 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTN 201
++ ++ +Y +I L + + L A KE E +GCA ++ + N
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCAR-NVVIYN 487
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+I + K R+E AEE+ + +G ++ T+ D ++ ++ A +++ I
Sbjct: 488 TLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIME 547
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
G P T + + HF + D+ A ++ + + + + + LI A
Sbjct: 548 G------LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKA 601
Query: 322 GRTSPV--MLRRLKME 335
GR +LR ++M+
Sbjct: 602 GRVQVASRLLRSIQMK 617
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 8/320 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NSL++ K G E+ I+ +M + P++ TYN + +L N + A + +
Sbjct: 346 YNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLT 405
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D TF++L + + A +E++ + D Y LI + L
Sbjct: 406 SKG-ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + + + L + Y +I K + AE+ F E E + D N +
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I K R+E+A +L ++ G P+ T+ ++ + GD+K A D ++ +G
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
P T T + + V A L ++ L + P+I+ R
Sbjct: 585 N------PDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638
Query: 324 TSPVM-LRRLKMEKVEVSEA 342
T M L R ++K E +A
Sbjct: 639 THEAMRLFREMLDKSEPPDA 658
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 107/251 (42%), Gaps = 2/251 (0%)
Query: 13 KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 72
K+ N SS + ++ K G E + +++EMK S D + +++ +
Sbjct: 89 KQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELY 148
Query: 73 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
+++ M+ + R+ D ++ L ++ V+A + E A + R D+S +
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESG 191
LI + + + + + ++ ++Q + +L GA + ++ E G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
C D+ V NV+I + K+GR++ A + A G P+ T+ + + G K A
Sbjct: 269 CPCTDVTV-NVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHA 327
Query: 252 VDCLEKAIDTG 262
++ ++ + G
Sbjct: 328 MEVVDAMLLGG 338
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE + ++M+ + S+ +N+L+ K+ E ++ +M + PD +TYN
Sbjct: 500 EEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSL 559
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ DI A +++ M G D T++ L S +AG + A R L+ ++ +
Sbjct: 560 LTHFCKTGDIKKAADIVQTMTSSG-CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
AY +I + E R++R +
Sbjct: 619 MVLTPHAYNPVIQALFKRNRTHEAMRLFREM 649
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 94/247 (38%), Gaps = 9/247 (3%)
Query: 53 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 112
+P +T + L D A RV + + + + +AG FE
Sbjct: 58 LPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMR 117
Query: 113 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQV 171
R L+E++ D + + YG+ EV I + + + + + N ++ V
Sbjct: 118 RVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNV 177
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
LV+ L E +D+ N++I A K ++ A + E G P+
Sbjct: 178 LVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPD 237
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFMRHFEQEKDVD 290
T+ Y+ G++ A+ E+ ++ G P ++ T+ + F ++ +D
Sbjct: 238 ETTFTTIMQGYIEGGNLDGALRIKEQMVEYG-------CPCTDVTVNVLINGFCKQGRID 290
Query: 291 GAEGFLE 297
A F++
Sbjct: 291 QALSFIQ 297
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A L+++M L +NSL+T + KTG +K I+Q M +S PD TY
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + A R++ ++ G V + +++ E A R +E+ ++
Sbjct: 594 LISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHE-AMRLFREMLDK 652
Query: 122 NAHRDLSAYQFL 133
+ D Y+ +
Sbjct: 653 SEPPDAITYKIV 664
>gi|302822814|ref|XP_002993063.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
gi|300139155|gb|EFJ05902.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
Length = 570
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 8/252 (3%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E L +++K + + N +M + ++IP + +E K+ + PD +YN+++
Sbjct: 220 ERLFKELKHRSWYTEASALNQMMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGF 279
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE----NR 121
+ SG E V + ++ D D +T LA Y+ G F+KA +AL ELE +
Sbjct: 280 HCKEKNASGLEEVYQMLQEDPNARPDESTLLILACGYISVGCFDKAGKALVELEEGLDSG 339
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
R + Y L+ LYG T + V IW S+ + P A SY I + + A
Sbjct: 340 LFRRKQATYNKLLRLYGDTKDKEGVESIW-SILSSRPLKAVDSYSYAIAAFGKAEGVHKA 398
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F + + T + M+ YA G + A EL ++ R+ ++
Sbjct: 399 EEIFAKVDGLLETNQV---IAMLSVYAHYGYADKARELFQKLPRKRMKHRLVVYKYLIAG 455
Query: 242 YLRNGDMKLAVD 253
YLR G++K A+
Sbjct: 456 YLREGEVKKALQ 467
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMP-DSYTYNVWMRALAAVNDISGAERVIEEM 82
+N L+ LY T E + +I + + + DSY+Y A+AA G + E
Sbjct: 348 YNKLLRLYGDTKDKEGVESIWSILSSRPLKAVDSYSY-----AIAAFGKAEGVHKAEEIF 402
Query: 83 -KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
K DG + + + S+Y G +KA ++L + L Y++LI Y + G
Sbjct: 403 AKVDGLLETNQVI--AMLSVYAHYGYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREG 460
Query: 142 NLSEVYRIW 150
+ + +++
Sbjct: 461 EVKKALQVF 469
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 45/336 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A+A+L MK + S + SL++ K G E+ I +EM + P + YN
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A +EM + G ++ +T+++L ++AE +KE++ +
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKG-ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI Y + N + + + + + +Y +++ VL + A+
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451
Query: 183 KCFKEWES----------------GCATYDIR------------------VT-NVMIGAY 207
FK+ S C+ +++ VT N ++ +
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
+EG++E A EL + +RRG P+ ++ Y R GD+K A + +DTG
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG----- 566
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ P+ T ++ + ++ D AE E+LK+ V
Sbjct: 567 -FNPTVLTYNALVQGLCKNQEGDLAE---ELLKEMV 598
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 5/263 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A L +M L + S FN ++ + K G +K + M+ S + P+ TYN
Sbjct: 202 TEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNT 261
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + A+ ++ MKR ++ D T+ +L S + G E+A + +E+ +
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQ-KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320
Query: 122 NAHRDLSAYQFLITLYGQTGNL--SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
Y LI + GNL + Y+ + P + +Y ++I L +
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS--TYNSLIHALFMEQRTD 378
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE KE + + D N++I Y + + A L + G P KT+
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
+ MK A D +K G
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEG 461
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 1/227 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
NSL++L+ K E + EM I YT+N+ + L + A+ + M+
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V + T++ + Y +G E A+ L ++ + D Y LI+ + G L
Sbjct: 250 SG-VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLE 308
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
E +I+ + + + Y +I N +L A E + + N +I
Sbjct: 309 EASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
A E R + AE + + + +G P+A T+ I + Y R + K A
Sbjct: 369 HALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKA 415
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L ++MK + + FN+L++ Y++ G + + EM + P TYN
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
++ L + AE +++EM G D T F+ + I
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 143/339 (42%), Gaps = 21/339 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE + +++EL+L + N ++ LY + K+ I+ M+ +I +TY +
Sbjct: 364 QKAEQVFNEIRELSLPLTISACNQMLLLYKRVSR-NKVVDILTLMEKENIKYSIFTYKLM 422
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE--- 119
+ NDI G E+V+ MK +G + ++T + +A Y+ EKAE + +E
Sbjct: 423 IDLKVRSNDILGMEQVLNSMKENG-LEPNFTIQTMVAKFYISGCFTEKAEEVINAMEVHV 481
Query: 120 --NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
NR+A R L+ LY G +V R+W A P + +L I+ L
Sbjct: 482 KANRHAVRS------LLDLYAILGRPVDVERVWN--LCAEPKLED--FLAAIKAWSKLGH 531
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ AE+ F + N M+ YA+ L+ +++ ER G TW+
Sbjct: 532 IERAEEIFDVLVKTFPKLTSKYFNAMLEVYAENKLLDKSKKFIERMCLDGCTIGPLTWDA 591
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y+ G++ A L + D P + ++ + ++ D+ AE +
Sbjct: 592 VVKLYVNLGELSKADSFLMNVTE----DNPDRHPLFSSYVILLKAYAEKGDIHNAEKIFD 647
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
+K+ + L+ YA+A T R+K +K
Sbjct: 648 RVKQTNFPARTLPYNLLLAAYASAQVTPYGFRERMKADK 686
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 138/341 (40%), Gaps = 15/341 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++L M+ G + + +N+L+ + + G + ++ M + P+ T+N
Sbjct: 167 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSM 226
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A +V +EM R+G +A D +++ L Y +AG +A E+ +
Sbjct: 227 VNGMCKAGKMEDARKVFDEMMREG-LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + LI + + GNL + R +R +++ +I L A
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + N +I Y GR++ A EL +G P+ T+ Y
Sbjct: 346 LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+N D A + ++ ++ G +P + T + +R +EK + A +L K
Sbjct: 406 CKNCDTHSAFELNQQMLEKG------VLPDAITYSSLIRVLCEEKRLSDA----HVLFKN 455
Query: 303 VDDLGVE----VFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 339
+ LG++ + LI + G + KM K V
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGV 496
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 109/245 (44%), Gaps = 18/245 (7%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L + M +L L + SL+ + K G+ E+ ++ +M + ++PD TY+V +
Sbjct: 449 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLIN 508
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAAD--------WTTFSNLASI------YVEAGLFEK 110
L+ A++++ ++ + + A+ + L S+ + GL +
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 568
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNM 168
A++ + + +RN + D S Y LI + + GN+ + + + R PN+ S +++
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNST--STISL 626
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
I+ L + A++ ++ + C+ D + +I EG ++ ++ + G
Sbjct: 627 IRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGL 686
Query: 229 DPNAK 233
P+ +
Sbjct: 687 LPSPR 691
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 1/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ LM + K E + ++ EM+A + P+ Y+Y + +R L + A R++ +M+
Sbjct: 209 YSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKME 268
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G D T + L I +AG A+ +++ + D Y L+ G +G+
Sbjct: 269 EEG-CKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDS 327
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
V IW +L+ N +SY + L + + A F E + N +
Sbjct: 328 RSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSL 387
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
I + K R A EL G PN T +F +Y+ ++G+
Sbjct: 388 ISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%), Gaps = 6/237 (2%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+++ AKTG + E+KA I PD+ TY + ++ + ++ A ++ EM
Sbjct: 455 NAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIE 514
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
+ R A D ++L + +AG +A + EL+ N Y L+ G+ G +
Sbjct: 515 N-RCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVK 573
Query: 145 EVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNV 202
EV ++ + +FP I+Y ++ L ++ A + + +GC D+ N
Sbjct: 574 EVMQLLEGMNSNSFPPNI-ITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMP-DLSSYNT 631
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
++ KE RL+ A + + ++ A A I ++R+G MK A+ + + I
Sbjct: 632 VMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPS-FVRSGLMKEALHTVREYI 687
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 85/227 (37%), Gaps = 17/227 (7%)
Query: 18 GFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
GFS P + L+ K G+ E A+ EM P+ YN+ + D
Sbjct: 866 GFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKV 925
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
+ E M G + D +++ + G K+L + DL Y LI
Sbjct: 926 CELFESMVEQG-MNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIH 984
Query: 136 LYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-----W 188
G++G L E ++ + + PN +Y ++I L A K ++E W
Sbjct: 985 GLGKSGRLEEALSLYNDMEKKGIAPNL--YTYNSLILYLGKAGKAAEAGKMYEELLAKGW 1042
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ TY N +I Y+ G ENA R G PN+ T+
Sbjct: 1043 KPNVFTY-----NALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 104/283 (36%), Gaps = 7/283 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE L +MK L ++ ++ K+ E + I +EM TYN
Sbjct: 781 LIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYN 840
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A + ++ +G + T+ L ++ G E AE E+
Sbjct: 841 TIISGLVKSKMLDEAINLYYQLMSEG-FSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + Y L+ Y G+ +V ++ S+ N SY +I L L
Sbjct: 900 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
FK+ D+ N++I K GRLE A L ++G PN T+
Sbjct: 960 GLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 1019
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
Y + G A E+ + G W P+ T +R +
Sbjct: 1020 YLGKAGKAAEAGKMYEELLAKG------WKPNVFTYNALIRGY 1056
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 109/296 (36%), Gaps = 42/296 (14%)
Query: 32 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 91
+ G ++ + EMK I+P Y+YN + + + A + M G
Sbjct: 357 CQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNG 416
Query: 92 WTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
+T + + ++G KA + + ++++ D+ A ++ +TG L R++
Sbjct: 417 YTHVL-FINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFH 475
Query: 152 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCAT---------------- 194
L+ + NI+Y MI+ + A K F E E+ CA
Sbjct: 476 ELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAG 535
Query: 195 ---------YDIR---------VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
Y+++ N ++ +EG+++ +L E PN T+
Sbjct: 536 RGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYN 595
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
D +NG++ A+D L G +P + T M +E +D A
Sbjct: 596 TVLDCLCKNGEVNYALDMLYSMTMNG------CMPDLSSYNTVMYGLVKEDRLDEA 645
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 97/238 (40%), Gaps = 1/238 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
+SLM K EK + + +S ++ D + +R L + A ++++ +
Sbjct: 700 HSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFEN 759
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V+ +++ L V+ L + AE E++ D Y ++ G++ +
Sbjct: 760 LG-VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIE 818
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
++ +I + + ++Y +I LV K L A + + S + ++
Sbjct: 819 DMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLL 878
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
K+G +E+AE L + G +PN + I + Y GD + + E ++ G
Sbjct: 879 DGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 936
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K EA++++MK N+ + +++ Y + G+ + + E + I P+ TY V +
Sbjct: 220 KVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLI 279
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AE ++ +M+ G V + F+ + Y G+ + A + +E
Sbjct: 280 NGFCKIGQMEAAEMLLADMQGRG-VGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGI 338
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y L + ++E + + + PN ++Y +I + D+ A
Sbjct: 339 ELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNY--VTYTTLISIHCKEGDMVEA 396
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F+E A + NVM+ Y K+G + AE ++ ++G P+ T+
Sbjct: 397 RRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHG 456
Query: 242 YLRNGDMKLAVDCLEK 257
+ NG + +A+ E+
Sbjct: 457 HCVNGKVDVALKLFEE 472
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 5/235 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LL M+ +G + + FN+++ Y + G + + M+ I D YTYN
Sbjct: 289 EAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTL 348
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L VN ++ A+ ++ M G V ++ T++ L SI+ + G +A R +E+ +
Sbjct: 349 ACGLCRVNRMAEAKTLLHIMIEKG-VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKG 407
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
A + Y ++ Y + G++ E R + + + P+ +Y +++ +
Sbjct: 408 AMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDV--YTYASLVHGHCVNGKVDV 465
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A K F+E + ++ +I AKEGR E A +L + + G P+ +
Sbjct: 466 ALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLY 520
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 125/323 (38%), Gaps = 7/323 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A ALL++M + +++ +NSL+ Y + ++ +++ M+ I TY +
Sbjct: 148 VDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTI 207
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L+ DIS E V++EMK VA D ++ + + Y AG +A E
Sbjct: 208 LVDSLSTAGDISKVEAVVDEMKAK-NVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGN 266
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y LI + + G + + ++ I + MI + A
Sbjct: 267 GIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNA 326
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K E D+ N + + R+ A+ L +G PN T+
Sbjct: 327 LKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISI 386
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ + GDM A + G+G +PS T M + ++ + AE F + ++K
Sbjct: 387 HCKEGDMVEARRLFREM--AGKG----AMPSVVTYNVMMDGYIKKGSIREAERFRKEMEK 440
Query: 302 AVDDLGVEVFEPLIRTYAAAGRT 324
V + L+ + G+
Sbjct: 441 KGLVPDVYTYASLVHGHCVNGKV 463
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 95/232 (40%), Gaps = 1/232 (0%)
Query: 31 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 90
+ K+G + A++ EM + ++ YN + D + + ++E M+ +G + A
Sbjct: 142 FCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIME-NGGIEA 200
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
T++ L AG K E + E++ +N D+ Y +I Y + GN+ ++
Sbjct: 201 TVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVF 260
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+Y +I + + AE + + ++ + N MI Y ++
Sbjct: 261 DECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQ 320
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
G ++NA ++K + G + + T+ + R M A L I+ G
Sbjct: 321 GMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 140/336 (41%), Gaps = 45/336 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A+A+L MK + S + SL++ K G E+ I +EM + P + YN
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A +EM + G ++ +T+++L ++AE +KE++ +
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKG-ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI Y + N + + + + + +Y +++ VL + A+
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451
Query: 183 KCFKEWES----------------GCATYDIR------------------VT-NVMIGAY 207
FK+ S C+ +++ VT N ++ +
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
+EG++E A EL + +RRG P+ ++ Y R GD+K A + +DTG
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG----- 566
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ P+ T ++ + ++ D AE E+LK+ V
Sbjct: 567 -FNPTVLTYNALVQGLCKNQEGDLAE---ELLKEMV 598
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 5/263 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A L +M L + S FN ++ + K G +K + M+ S + P+ TYN
Sbjct: 202 TEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNT 261
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + A+ ++ MKR ++ D T+ +L S + G E+A + +E+ +
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQ-KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK 320
Query: 122 NAHRDLSAYQFLITLYGQTGNL--SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
Y LI + GNL + Y+ + P + +Y ++I L +
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS--TYNSLIHALFMEQRTD 378
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE KE + + D N++I Y + + A L + G P KT+
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
+ MK A D +K G
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEG 461
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 1/227 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
NSL++L+ K E + EM I YT+N+ + L + A+ + M+
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMET 249
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V + T++ + Y +G E A+ L ++ + D Y LI+ + G L
Sbjct: 250 SG-VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLE 308
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
E +I+ + + + Y +I N +L A E + + N +I
Sbjct: 309 EASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
A E R + AE + + + +G P+A T+ I + Y R + K A
Sbjct: 369 HALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKA 415
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L ++MK + + FN+L++ Y++ G + + EM + P TYN
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
++ L + AE +++EM G D T F+ + I
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 137/321 (42%), Gaps = 7/321 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A L E+M + N +++ + SL+ + K G E I EM PD N
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+M + +I + +E+K G + D +++ L V+AG +A ++ +
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIP-DARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D AY +I + ++G +++ Y++ ++ ++Y ++I L + L A
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E +S ++ + + +I + K GR++ A + E ++G PN TW D
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
++ ++ A+ C + D K P+ T + + + + A F + ++K
Sbjct: 734 LVKAEEISEALVCFQSMKDL------KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787
Query: 302 AVDDLGVEVFEPLIRTYAAAG 322
V + +I A AG
Sbjct: 788 QGFKPNVFTYTTMISGLAKAG 808
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 1/247 (0%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E +LE+M G S+ ++ + K+ + IQ M+ P Y + A
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGA 209
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
L+ D + ++M+ G A + F+ L ++ G + A L E+++ +
Sbjct: 210 LSTSRDSDCMLTLFQQMQELG-YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP 268
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D+ Y I +G+ G + ++ + ++ +++Y +MI VL L A + F
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+ + N MI Y G+ E+A L ER RR+G P+ ++ R
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK 388
Query: 246 GDMKLAV 252
G + A+
Sbjct: 389 GQVDEAL 395
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 139/319 (43%), Gaps = 16/319 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A +LL++MK +L + +N + + K G + EMKA+ ++ D TY
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + ++ A + E M ++ +V + ++ + Y AG FE A L+ +
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAY-AYNTMIMGYGMAGKFEDAYSLLERQRRK 369
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y +++ G+ G + E + + ++ A PN + +Y MI +L L
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLS--TYNIMIDMLCKAGKLET 427
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + ++ N+M+ K RL++A + E + P+A T+ +
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH-FEQEKDVDGAEGFLEIL 299
R+G + A E+ +D + +P++ + +R+ F+ + DG + + E+L
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQ------IPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541
Query: 300 KKAVDDLGVEVFEPLIRTY 318
+ LG L+ TY
Sbjct: 542 R-----LGCSPDLLLLNTY 555
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 133/354 (37%), Gaps = 41/354 (11%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ M++L + + +L+ + + + + + Q+M+ + + + +
Sbjct: 183 EAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLI 242
Query: 64 RALAAVNDISGAERVIEEMKRD-------------------GRVAADWTTFSNLAS---- 100
R A + A +++EMK + G+V W F + +
Sbjct: 243 RVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLV 302
Query: 101 ----IYVEA-GLFEKAER---ALKELENRNAHRDLS---AYQFLITLYGQTGNLSEVYRI 149
Y G+ KA+R A++ E+ + ++ + AY +I YG G + Y +
Sbjct: 303 LDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSL 362
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
R + +SY ++ L + A K F+E + A ++ N+MI K
Sbjct: 363 LERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKD-AIPNLSTYNIMIDMLCK 421
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 269
G+LE A +++ + G PN T I D + + A E D
Sbjct: 422 AGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL------DHKTC 475
Query: 270 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
P + T + + + VD A E + A V+ LIR + GR
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++E++ + L + +N L+ K + Q MK P+ TY++
Sbjct: 706 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSIL 765
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + + A +EM++ G + T++ + S +AG +A+ ++ + +
Sbjct: 766 IHGLCKIRKFNKAFVFWQEMQKQG-FKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG 824
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 155
D + Y +I S+ YR++ RL
Sbjct: 825 GVADSAIYNAIIEGLSNANRASDAYRLFEEARL 857
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 1/228 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NSL+ ++ G +++ + M PD++T+ + + L + A++++E M
Sbjct: 219 YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMH 278
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G+ D T++ L + G E A + + L +R ++ +Y LI Y + +
Sbjct: 279 HKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 337
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +R++ +R + ++Y +I L + A+K F E ++ + V+
Sbjct: 338 DEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 397
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
+ K G LE A +L + ++ PN + + I D R G ++ A
Sbjct: 398 LDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 445
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 2/250 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A L EKMK N + ++ K G + + EM + I+PD Y+
Sbjct: 128 TGLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M L + A +EM+ G ++AD T+++L AGL+++ L + +R
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRG-ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 245
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D + LI + G + E +I + ++Y ++ L + L A
Sbjct: 246 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDA 305
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K F+ ++ N++I Y K+ +++ A L E R +G P+ T+
Sbjct: 306 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGA 365
Query: 242 YLRNGDMKLA 251
++G ++ A
Sbjct: 366 LCQSGRVRTA 375
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 1/229 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L E + + + + +N L+ Y K ++ + +EM+ + P + TYN
Sbjct: 303 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTL 362
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + A+++ EM+ G+ +T+ L + G E+A + ++
Sbjct: 363 IGALCQSGRVRTAQKLFVEMQTCGQFLK-LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ + L+ + G L E ++ + + I+Y +I L N L A
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 481
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
K + E D NV+I KE + A +L E R R P+
Sbjct: 482 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 86/233 (36%), Gaps = 3/233 (1%)
Query: 30 LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVA 89
++ + G P+ + + EM + D+ TY + + L A ++ E+MK G
Sbjct: 87 VWMENGIPDAV-QLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMK--GNCK 143
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D T+ + + G+ +A E+ D+ Y L+ + G L E
Sbjct: 144 GDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 203
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
++ + + +Y ++I L + D ++I K
Sbjct: 204 FKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCK 263
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
EG++ A+++ E +G +P+ T+ + G ++ A E D G
Sbjct: 264 EGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 140/382 (36%), Gaps = 62/382 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +LL M E N S +N+L++ K + ++ ++ E +S +PD TY++
Sbjct: 62 ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSIL 121
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L I A +++EM +G + T++ L +A EKA L+ L +
Sbjct: 122 ADGLCKRGRIDEAFELVKEMSGNG-CTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y ++ + G L + ++ + + I+Y +++ L + A
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 183 KCFKEWESGCATYD--------------------------------IRVTNVMIGAYAKE 210
FKE S T D I V N ++ Y KE
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG------ 264
GRL+ + E RG PN KT+ I D ++G + A LE G
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360
Query: 265 ----DG-------------------GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
DG P + T T M F +E+ D A G L+ + K
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420
Query: 302 AVDDLGVEVFEPLIRTYAAAGR 323
A D + LI + R
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNR 442
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 14/241 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++M + + ++ +N+LM + K + I++ M + + PD+ TYN
Sbjct: 374 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 433
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L+ N + A ++ EM R+G V + TT++ + + G ++A + +
Sbjct: 434 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG 493
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWR---SLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ Y I + G L E + +LR +SY +I L + L
Sbjct: 494 VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR------DEVSYTTVIIGLCKAEQLD 547
Query: 180 GAEKCFKEW---ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A K +E + C T N++I A+ K RL+ A L E +RG P+ T+
Sbjct: 548 RASKLAREMVAVKGLCITS--HTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYN 605
Query: 237 I 237
+
Sbjct: 606 M 606
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 2/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+LM Y K G ++IP + ++M +P+ TYN+ M L + A +E M
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V D +++ + +A ++A + L ++ D Y L+ + +
Sbjct: 350 SAGCV-PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 408
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNV 202
+ I +++ A + N++Y +I L L A + E +GC N
Sbjct: 409 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 468
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+I KEG L+ A L + G + N T+ IF D + G
Sbjct: 469 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 512
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 47/323 (14%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+KA +L +M + + ++ FNS+M K G E+ +++ M + P TYN
Sbjct: 26 TDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNT 85
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L ++ A+ +++E G V D T+S LA + G ++A +KE+
Sbjct: 86 LISGLCKQQNVDRAKTLVDEFVSSGFV-PDVVTYSILADGLCKRGRIDEAFELVKEMSGN 144
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+L Y LI + + Y +++ LV+ +P
Sbjct: 145 GCTPNLVTYNTLIDGLCKASKTEKAYE-------------------LLETLVSSGFVP-- 183
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
D+ +++ KEGRL+ A ++ E +RG P+ T+ +
Sbjct: 184 --------------DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 229
Query: 242 YLRNGDMKLAVDCLEKAIDT-GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
R G + A ++ + D +V R E +K VDG G I
Sbjct: 230 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI-- 287
Query: 301 KAVDDLGVEVFEPLIRTYAAAGR 323
+V+ L+ Y GR
Sbjct: 288 --------DVYNALMDGYCKEGR 302
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 118/247 (47%), Gaps = 4/247 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNV 61
+A + KMKE ++ FN+L+ + G P + +++ M + ++ P+ TYN+
Sbjct: 130 HEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNI 189
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-- 119
++A N++ A V+ +M G + D T++ LA + + G + AER + +++
Sbjct: 190 LIQAWCTKNELEEAWNVMHKMVNSG-MQPDIVTYNTLARAFAQNGETDNAERLILKMQQY 248
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N + +I Y + GN++E R ++ + + + ++I+ +++ D
Sbjct: 249 NNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTD 308
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G E+ E D+ + ++ A++ G ++N EE+ + + +P+ + + I +
Sbjct: 309 GVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILA 368
Query: 240 DYYLRNG 246
Y+R G
Sbjct: 369 KGYVRAG 375
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 121/317 (38%), Gaps = 39/317 (12%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+LL K++E + S+ FN+++ ++ +G + I ++MK P + T+N ++
Sbjct: 99 SLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGF 158
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
V A +++E M +DG V + T++ L + E+A + ++ N D
Sbjct: 159 GIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPD 218
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y L + Q G R+ ++ Y N ++ P C
Sbjct: 219 IVTYNTLARAFAQNGETDNAERLILKMQ---------QYNNKVK--------PNERTC-- 259
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
++I Y KEG + A + + G PN + YL
Sbjct: 260 --------------GIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDIT 305
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
D D +E+A+ G K P T T M + +D E + + KA +
Sbjct: 306 D----TDGVEEALTLMEEFGIK--PDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEP 359
Query: 307 GVEVFEPLIRTYAAAGR 323
++ + L + Y AG+
Sbjct: 360 DIQAYSILAKGYVRAGQ 376
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 121/303 (39%), Gaps = 18/303 (5%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
LM+ + G P + I + P TY + AL + + ++ +++ +G
Sbjct: 49 LMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENG 108
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
V D F+ + + + ++G +A + ++++ S + LI +G G E
Sbjct: 109 -VKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEA 167
Query: 147 YRIWRSLRL---AFPN--TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
++ + PN T NI +IQ +L A + + DI N
Sbjct: 168 MKLLEMMIQDGNVKPNERTYNI----LIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYN 223
Query: 202 VMIGAYAKEGRLENAEE--LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
+ A+A+ G +NAE LK + PN +T I Y + G+M A+ L K
Sbjct: 224 TLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMK 283
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
+ G P+ + ++ + D DG E L ++++ V + ++ ++
Sbjct: 284 ELGVH------PNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWS 337
Query: 320 AAG 322
++G
Sbjct: 338 SSG 340
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+ E L M+E + + ++++M ++ +G + I +M + I PD Y++
Sbjct: 307 TDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSI 366
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AE ++ M + G + A+ F+ + S + AG + A R +++
Sbjct: 367 LAKGYVRAGQPDKAEALLNSMTKYG-LQANVVIFTTIISGWCAAGKMDCALRLYEKMNEM 425
Query: 122 NAHRDLSAYQFLITLYGQ 139
+L Y+ LI YG+
Sbjct: 426 GTPLNLKTYETLIWGYGE 443
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 153/356 (42%), Gaps = 29/356 (8%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E AE +M +L + + + ++ G +K II EM + +PD TY+
Sbjct: 398 LLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYS 457
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + + A + EEMK++G V + + T++ L + +AGL ++A E+
Sbjct: 458 KVIGFLCDASKVEKAFLLFEEMKKNGIVPSVY-TYTILIDSFCKAGLIQQARNWFDEMLR 516
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI----------- 169
N ++ Y LI Y + + + +++ + L ++Y +I
Sbjct: 517 DNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDK 576
Query: 170 --QVLVNLK-DLPGA--EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
Q+ ++ D+ + + FK ++ C T +I ++ K R+E A EL +
Sbjct: 577 ACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMS 636
Query: 225 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 284
G +PN ++ D + + G ++ A + K + G + P+ T + +
Sbjct: 637 VNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERG------YCPNLYTYSSLINSLF 690
Query: 285 QEKDVDGAEGFLEILKKAVDDL---GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
+EK +D L++L K +++ V ++ +I G+T LKME+V
Sbjct: 691 KEKRLDLV---LKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEV 743
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 94/235 (40%), Gaps = 7/235 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG------AER 77
FNSL+ Y K+ + ++M P YN+++ ++ + ++ G AE+
Sbjct: 345 FNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEK 404
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
EM G V + SN A AG F+KA + E+ ++ D S Y +I
Sbjct: 405 AYSEMLDLG-VVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFL 463
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
+ + + ++ ++ + +Y +I + A F E T ++
Sbjct: 464 CDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNV 523
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
+I AY K ++ +A +L E G+ PN T+ D + + G + A
Sbjct: 524 VTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKAC 578
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 121/323 (37%), Gaps = 22/323 (6%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L ++K+ S +N+L+ ++ + + + +EM S D T + +L
Sbjct: 193 LGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCK 252
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A ++E+ + D ++ + S EA LF++A L + + + ++
Sbjct: 253 AGRCGDALSLLEKEE----FVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVV 308
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
Y+ L++ G L RI + +PN + +++ +D A K FK
Sbjct: 309 TYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFN--SLVHAYCKSRDYSYAYKLFK 366
Query: 187 EW-ESGCATYDIRVTNVMIGAYAKEGRLENAE--ELKERARRR----GADPNAKTWEIFS 239
+ + GC + N+ IG+ L ++ EL E+A G N F+
Sbjct: 367 KMIKCGCQP-GYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA 425
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
G A + + + + G +VP T + V+ A E +
Sbjct: 426 RCLCGAGKFDKAFEIICEMMSKG------FVPDDSTYSKVIGFLCDASKVEKAFLLFEEM 479
Query: 300 KKAVDDLGVEVFEPLIRTYAAAG 322
KK V + LI ++ AG
Sbjct: 480 KKNGIVPSVYTYTILIDSFCKAG 502
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 152/342 (44%), Gaps = 15/342 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTY 59
M KA ++ ++K ++ +NS++ + + GH EK+ I EM + PD+ TY
Sbjct: 178 MVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTY 237
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + A + A R+ +EMK +G + ++ L IY + EKA +KE++
Sbjct: 238 SALISAFGKLGHYDSAIRLFDEMKENG-LYPTAKIYTTLLGIYFKLDKVEKALDVIKEMK 296
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKD 177
++ + Y I G+ G + + YR++ + P+ I+ ++I +L +
Sbjct: 297 DKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLIN--SLINILGKVGR 354
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGA-YAKEGRLENAEELKERARRRGADPNAKTWE 236
L K F++ ES ++ N +I A + + A E+ + G P++ T+
Sbjct: 355 LEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYS 414
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGF 295
I D + + ++ A+ LE+ + G + P + + + K + A E F
Sbjct: 415 ILIDGFCKTNRIEKALLLLEEMDEKG------FPPCPAAYCSLINSLGKVKRYEAANELF 468
Query: 296 LEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKV 337
LE LK+ V+ +I+ + GR S + +MEK+
Sbjct: 469 LE-LKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKL 509
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 2/234 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEMK 83
NSL+ + K G E + ++M++ P+ TYN ++AL S A E+MK
Sbjct: 343 NSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMK 402
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G +A T+S L + + EKA L+E++ + +AY LI G+
Sbjct: 403 GCG-IAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRY 461
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ L+ +++ Y MI+ L A F E E + D+ N +
Sbjct: 462 EAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNAL 521
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
+ + G ++ A+ L G P+ + I + R G A++ K
Sbjct: 522 MSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAK 575
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 5/172 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
EKA LLE+M E GF P + SL+ K E + E+K + + Y
Sbjct: 427 EKALLLLEEMDEK--GFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYA 484
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V ++ +S A + EM++ G D ++ L S V AG+ ++A+ L+ ++
Sbjct: 485 VMIKHFGKCGRLSEAVDLFNEMEKLGS-KPDVYAYNALMSGMVRAGMIDEAQSLLRTMDE 543
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
DL+++ ++ +TG ++ ++ + +SY ++ L
Sbjct: 544 NGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCL 595
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 73/171 (42%), Gaps = 3/171 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMT-LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A L ++KE N G SS ++M + K G + + EM+ PD Y YN
Sbjct: 462 EAANELFLELKE-NCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNA 520
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M + I A+ ++ M +G + D + + + + G+ ++A ++++
Sbjct: 521 LMSGMVRAGMIDEAQSLLRTMDENG-CSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSS 579
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
D +Y ++ G E ++ R + L NI+Y ++++ +
Sbjct: 580 IIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAV 630
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A++LL M E N ++ A+TG P++ + +MK+S I PD+ +YN
Sbjct: 530 MIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYN 589
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG 86
+ L+ A +++ EM G
Sbjct: 590 TVLGCLSHAGLFEEAAKLMREMNLKG 615
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 34/186 (18%)
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
+ I++M R S + + +A + KA +++ R + Y +I +
Sbjct: 148 KTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILM 207
Query: 137 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 196
Q G+L +V+ I+ + N N CF D
Sbjct: 208 LKQEGHLEKVHEIYNEM----CNDGN---------------------CFP---------D 233
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
+ +I A+ K G ++A L + + G P AK + Y + ++ A+D ++
Sbjct: 234 TVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIK 293
Query: 257 KAIDTG 262
+ D G
Sbjct: 294 EMKDKG 299
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 128/296 (43%), Gaps = 15/296 (5%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N++++ + K E ++ MK PD T+N+ + I A +V EE+
Sbjct: 47 YNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELL 106
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+D T++ L Y+ G ++A + L E+ +R D Y + + G +
Sbjct: 107 KDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKV 166
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNV 202
+ R+L I+Y +++ L+N EK E + GC ++ ++
Sbjct: 167 DRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEP-NVVTYSI 225
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+I + ++G++E + L + + +G P+A ++ + R G + +A++ L+ I G
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
++P T M + + D A +EI K +D++G P + +Y
Sbjct: 286 ------FLPDIVNYNTIMAALCKNGNGDHA---VEIFGK-LDEVGC---PPNVSSY 328
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 12/249 (4%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD + YN + N I A+ V++ MKR G + D T + + + G + A +
Sbjct: 42 PDVFAYNAVISGFCKANRIESAKTVLDRMKRKG-FSPDVVTHNIMIGTFCGKGKIDLALK 100
Query: 114 ALKE-LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQ 170
+E L++ N L Y LI Y G + E ++ + R P+T +Y + +
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDT--FTYNVITR 158
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
L + A + + S D+ N+++ A +G+ + E+ RG +P
Sbjct: 159 GLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEP 218
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
N T+ I R+G ++ +V+ ++ + G P + + F +E +D
Sbjct: 219 NVVTYSILISSLCRDGKIEESVNLVKVMKEKG------LTPDAYCYDPLIAAFCREGKLD 272
Query: 291 GAEGFLEIL 299
A FL+ +
Sbjct: 273 MAIEFLDCM 281
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 119/309 (38%), Gaps = 14/309 (4%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
E +K+ N + + + L+ Y G ++ ++ EM + + PD++TYNV R L
Sbjct: 104 ELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKE 163
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
+ A + + G D T++ L + G +++ E+ + E+ +R ++
Sbjct: 164 GKVDRAFEFVRTLNSRG-CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVT 222
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
Y LI+ + G + E + + ++ Y +I L A +
Sbjct: 223 YSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI 282
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
DI N ++ A K G ++A E+ + G PN ++ +GD
Sbjct: 283 CDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRY 342
Query: 250 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVE 309
A+ + + + G P T + + ++ VD A G L D+
Sbjct: 343 RALGMISQMLSKGID------PDVITYNSLISCLCRDGMVDEAIGLLA-------DMLSG 389
Query: 310 VFEPLIRTY 318
F+P I +Y
Sbjct: 390 RFQPNIVSY 398
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 16/306 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL++M L + +N + K G ++ ++ + + PD TYN+
Sbjct: 132 DEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNIL 191
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+RAL E+ + E+ G + T+S L S G E++ +K ++ +
Sbjct: 192 LRALLNQGKWDEGEKWMSEIFSRG-CEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 250
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
D Y LI + + G L + P+ N Y ++ L +
Sbjct: 251 LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVN--YNTIMAALCKNGNGDH 308
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + F + E GC ++ N M+ A G A + + +G DP+ T+
Sbjct: 309 AVEIFGKLDEVGCPP-NVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLI 367
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
R+G + A+ L + G++ P+ + +T + + +D A +E+L
Sbjct: 368 SCLCRDGMVDEAIGLLADML------SGRFQPNIVSYKTVLLGLCKAHRIDDA---IEVL 418
Query: 300 KKAVDD 305
+++
Sbjct: 419 AAMIEN 424
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 5/226 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N ++ Y + EK + + M + + PD TYN ++ LA+ + +E+M+
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V+ D + + S +V+ G AE KE+ N D+ Y LI + TGN+
Sbjct: 568 ETGYVS-DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNV 626
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY---DIRVT 200
+ +++ A ++ Y ++I++ + L AE +++ C D+ +
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTS 686
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
N MI Y++ + AE + + ++RG + N T+ + Y +NG
Sbjct: 687 NCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNG 731
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 7/261 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M K LEKM+E +P+ ++++ + K G + +EM +I PD Y
Sbjct: 555 MPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG 614
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE---RALKE 117
V + A A ++ A +E MK G + + +++L +Y + G ++AE R L +
Sbjct: 615 VLINAFADTGNVQQAMSYVEAMKEAG-IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLK 176
N+ + D+ +I LY + + + I+ S++ AN ++ M+ +
Sbjct: 674 SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQR--GEANEFTFAMMLCMYKKNG 731
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A + K+ D N ++G +A +GR + A E + G P+ T++
Sbjct: 732 RFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFK 791
Query: 237 IFSDYYLRNGDMKLAVDCLEK 257
++ G K AV +E+
Sbjct: 792 SLGTILMKLGMSKKAVRKIEE 812
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 122/296 (41%), Gaps = 49/296 (16%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+L++ MK L+ + +N L++L+ K E+ A +EMK + PD +Y + A
Sbjct: 354 SLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF 412
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK---------------- 110
+ + + AE +I EM D V D T S L +YVEA + EK
Sbjct: 413 SIRHMVEEAEGLIAEMD-DDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS 471
Query: 111 ------------------AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
AER + N R + Y +I YG + + + ++ S
Sbjct: 472 EGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFES 530
Query: 153 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE------WESGCATYDIRVTNVMIGA 206
+ +Y ++Q+L + D+P +C+ E + S C Y +I +
Sbjct: 531 MMSYGVTPDKCTYNTLVQILAS-ADMPHKGRCYLEKMRETGYVSDCIPY-----CAVISS 584
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ K G+L AEE+ + +P+ + + + + G+++ A+ +E + G
Sbjct: 585 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 111/268 (41%), Gaps = 13/268 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKA L E M + +N+L+ + A P K +++M+ + + D Y
Sbjct: 521 CEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCA 580
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + ++ AE V +EM + + D + L + + + G ++A ++ ++
Sbjct: 581 VISSFVKLGQLNMAEEVYKEM-VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEA 639
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-----RLAFPN--TANISYLNMIQVLVN 174
+ Y LI LY + G L E I+R L + +P+ T+N MI +
Sbjct: 640 GIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNC----MINLYSE 695
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ AE F + + +M+ Y K GR E A ++ ++ R + +
Sbjct: 696 RSMVRKAEAIFDSMKQRGEANEFTFA-MMLCMYKKNGRFEEATQIAKQMREMKILTDPLS 754
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ + +G K AV+ ++ + +G
Sbjct: 755 YNSVLGLFALDGRFKEAVETFKEMVSSG 782
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 139/354 (39%), Gaps = 57/354 (16%)
Query: 16 NLGFSSMPFNSLMTLYAKTGHPEK-------------IPAII-------------QEMKA 49
++ SS +N+++ Y K+G ++ +P + Q +
Sbjct: 293 HVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEV 352
Query: 50 SSIM--------PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+S+M PD+ TYN+ + NDI A +EMK DG + D ++ L
Sbjct: 353 TSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDG-LKPDPVSYRTLLYA 411
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + E+AE + E+++ N D L +Y + L + + ++ +A N +
Sbjct: 412 FSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVA-GNMS 470
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT---NVMIGAYAKEGRLENAEE 218
+ Y I L AE+ F C + R NVMI AY E A E
Sbjct: 471 SEGYSANIDAYGERGYLSEAERVF----ICCQEVNKRTVIEYNVMIKAYGISKSCEKACE 526
Query: 219 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC-LEKAIDTGRGDGGKWVPSSETIR 277
L E G P+ T+ L + DM C LEK +TG +P I
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQ-ILASADMPHKGRCYLEKMRETGYVS--DCIPYCAVIS 583
Query: 278 TFMRHFEQEKDVDGAEGFLEILKKAVD---DLGVEVFEPLIRTYAAAGRTSPVM 328
+F++ + ++ AE E+ K+ V+ + V V+ LI +A G M
Sbjct: 584 SFVKLGQ----LNMAE---EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 82/202 (40%), Gaps = 8/202 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI---- 79
+ +L+ +Y+K G + +M + PD T + ++ + AE
Sbjct: 225 YGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWS 284
Query: 80 -EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+E K D V T++ + Y ++G ++A K + + +I +YG
Sbjct: 285 CDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYG 344
Query: 139 QTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
G L EV + ++++L P+T +Y +I + D+ A FKE + D
Sbjct: 345 NNGQLGEVTSLMKTMKLHCAPDTR--TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDP 402
Query: 198 RVTNVMIGAYAKEGRLENAEEL 219
++ A++ +E AE L
Sbjct: 403 VSYRTLLYAFSIRHMVEEAEGL 424
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + ++M+E+ + + +NS++ L+A G ++ +EM +S I PD T+
Sbjct: 734 EEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Query: 63 MRALAAVNDISGAERVIEEMKR 84
L + A R IEE+++
Sbjct: 794 GTILMKLGMSKKAVRKIEEIRK 815
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 23/330 (6%)
Query: 4 KAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A+ LL M E S + +N+++ + K G K + +EM I PD TY+
Sbjct: 202 QADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 261
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + AE + +M G + +WT ++NL Y G +++A R KE+ +
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSSTGQWKEAVRVFKEMRRQ 320
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------VLVNL 175
+ D+ A L+ + G + E ++ ++ + N SY M+ LV++
Sbjct: 321 SILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDM 380
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
DL F DI NV+I AYA G L+ A + R G P+ T+
Sbjct: 381 TDL------FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTY 434
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
R G M A++ + ID G VP ++ F + A+
Sbjct: 435 MTVIAALCRIGKMDDAMEKFNQMIDQG------VVPDKYAYHCLIQGFCTHGSLLKAKEL 488
Query: 296 L-EILKKAVDDLGVEVFEPLIRTYAAAGRT 324
+ EI+ + L + F +I GR
Sbjct: 489 ISEIMNNGM-RLDIVFFGSIINNLCKLGRV 517
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 134/359 (37%), Gaps = 42/359 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA L +M + + +N+L+ Y+ TG ++ + +EM+ SI+PD N
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M +L I A V + M G+ +
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
A D TF+ L Y G+ +KA E+ + + Y +I + G + +
Sbjct: 393 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ + +Y +IQ L A++ E + DI +I
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K GR+ +A+ + + G P+A + + D Y G M+ A+ + + G
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG------ 566
Query: 269 WVPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSP 326
P+ T + + + +D G F E+L+K + + ++ +I AGRT P
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI-LYNIIIDGLFEAGRTVP 624
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 107/294 (36%), Gaps = 7/294 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ L+ ++ + + F S++ K G I + PD+ YN+ M
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V + A RV + M G + + + L + Y + G ++ +E+ +
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAG-IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y +I + G + + + +Y +++ L + A
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
FKE + DI N MI + R+E A++L R G P A T+ I L
Sbjct: 663 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLL 722
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G ++ A D + G P S + +R ++ ++ A +L
Sbjct: 723 KEGLVEEAEDMFSSMQNAG------CEPDSRLLNHVVRELLKKNEIVRAGAYLS 770
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 36/231 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA + + M + + + + +L+ Y K G ++ ++ +EM I P + YN+
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ EM G +A + T+S + + F++A KEL N
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESG-IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 671
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ +I QT + E ++ A+IS ++ V
Sbjct: 672 VKIDIITLNTMIAGMFQTRRVEEAKDLF----------ASISRSGLVPCAV--------- 712
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
TY I +TN++ KEG +E AE++ + G +P+++
Sbjct: 713 -----------TYSIMITNLL-----KEGLVEEAEDMFSSMQNAGCEPDSR 747
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/237 (16%), Positives = 88/237 (37%), Gaps = 1/237 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + +M++ + + + +++ + G + +M ++PD Y Y+
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A+ +I E+ +G + D F ++ + + G A+ N
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNG-MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H D Y L+ Y G + + R++ ++ A + Y ++ + +
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
F+E + N++I + GR A+ G N T+ I
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 137/321 (42%), Gaps = 7/321 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A L E+M + N +++ + SL+ + K G E I EM PD N
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+M + +I + +E+K G + D +++ L V+AG +A ++ +
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIP-DARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D AY +I + ++G +++ Y++ ++ ++Y ++I L + L A
Sbjct: 614 GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E +S ++ + + +I + K GR++ A + E ++G PN TW D
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
++ ++ A+ C + D K P+ T + + + + A F + ++K
Sbjct: 734 LVKAEEISEALVCFQSMKDL------KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK 787
Query: 302 AVDDLGVEVFEPLIRTYAAAG 322
V + +I A AG
Sbjct: 788 QGFKPNVFTYTTMISGLAKAG 808
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 1/247 (0%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E +LE+M G S+ ++ + K+ + IQ M+ P Y + A
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGA 209
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
L+ D + ++M+ G A + F+ L ++ G + A L E+++ +
Sbjct: 210 LSTSRDSDCMLTLFQQMQELG-YAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP 268
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D+ Y I +G+ G + ++ + ++ +++Y +MI VL L A + F
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+ + N MI Y G+ E+A L ER RR+G P+ ++ R
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK 388
Query: 246 GDMKLAV 252
G + A+
Sbjct: 389 GQVDEAL 395
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 139/319 (43%), Gaps = 16/319 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A +LL++MK +L + +N + + K G + EMKA+ ++ D TY
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + ++ A + E M ++ +V + ++ + Y AG FE A L+ +
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAY-AYNTMIMGYGMAGKFEDAYSLLERQRRK 369
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y +++ G+ G + E + + ++ A PN + +Y MI +L L
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLS--TYNIMIDMLCKAGKLET 427
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + ++ N+M+ K RL++A + E + P+A T+ +
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH-FEQEKDVDGAEGFLEIL 299
R+G + A E+ +D + +P++ + +R+ F+ + DG + + E+L
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQ------IPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541
Query: 300 KKAVDDLGVEVFEPLIRTY 318
+ LG L+ TY
Sbjct: 542 R-----LGCSPDLLLLNTY 555
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 133/354 (37%), Gaps = 41/354 (11%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ M++L + + +L+ + + + + + Q+M+ + + + +
Sbjct: 183 EAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLI 242
Query: 64 RALAAVNDISGAERVIEEMKRD-------------------GRVAADWTTFSNLAS---- 100
R A + A +++EMK + G+V W F + +
Sbjct: 243 RVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLV 302
Query: 101 ----IYVEA-GLFEKAER---ALKELENRNAHRDLS---AYQFLITLYGQTGNLSEVYRI 149
Y G+ KA+R A++ E+ + ++ + AY +I YG G + Y +
Sbjct: 303 LDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSL 362
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
R + +SY ++ L + A K F+E + A ++ N+MI K
Sbjct: 363 LERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKD-AIPNLSTYNIMIDMLCK 421
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 269
G+LE A +++ + G PN T I D + + A E D
Sbjct: 422 AGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL------DHKTC 475
Query: 270 VPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
P + T + + + VD A E + A V+ LIR + GR
Sbjct: 476 RPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGR 529
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 66/153 (43%), Gaps = 1/153 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++E++ + L + +N L+ K + Q MK P+ TY++
Sbjct: 706 DEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSIL 765
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + + A +EM++ G + T++ + S +AG +A+ ++ + +
Sbjct: 766 IHGLCKIRKFNKAFVFWQEMQKQG-FKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKG 824
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 155
D + Y +I S+ YR++ RL
Sbjct: 825 GVADSAIYNAIIEGLSNANRASDAYRLFEEARL 857
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 5/228 (2%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +N ++ Y + EK + + M + + PD TYN ++ LA+ + A+ +E+
Sbjct: 505 LEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEK 564
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M+ G V+ D + + S +V+ G AE KE+ N D+ Y LI + TG
Sbjct: 565 MRETGYVS-DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 623
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC--ATY-DIR 198
N+ + +++ A ++ Y ++I++ + L AE +++ C Y D+
Sbjct: 624 NVQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVY 683
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+N MI Y++ + AE + E ++R + N T+ + Y +NG
Sbjct: 684 TSNCMINLYSQRSMVRKAEAIFESMKQR-REANEFTFAMMLCMYKKNG 730
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 7/261 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA+ LEKM+E +P+ ++++ + K G + +EM +I PD Y
Sbjct: 554 MPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG 613
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE---RALKE 117
V + A A ++ A +E MK G + + +++L +Y + G ++AE R L
Sbjct: 614 VLINAFADTGNVQQAMSYVEAMKEAG-IPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLR 672
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLK 176
N + D+ +I LY Q + + I+ S++ AN ++ M+ +
Sbjct: 673 SCNETQYPDVYTSNCMINLYSQRSMVRKAEAIFESMKQR--REANEFTFAMMLCMYKKNG 730
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A + K+ D N ++G YA +GR + A E + G P+ T++
Sbjct: 731 RFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFK 790
Query: 237 IFSDYYLRNGDMKLAVDCLEK 257
++ G K AV +E+
Sbjct: 791 SLGTILIKLGMSKKAVRKIEE 811
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 121/296 (40%), Gaps = 49/296 (16%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+L++ MK + + +N L++L+ K E+ +EMK + + PD +Y + A
Sbjct: 353 SLMKTMK-FHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAF 411
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK---------------- 110
+ + + AE +I EM D V D T S L +Y+EA + EK
Sbjct: 412 SIRHMVKEAEELIAEMD-DNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAGNMSS 470
Query: 111 ------------------AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
AER + N R + Y +I YG + + + ++ S
Sbjct: 471 EGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVLEYNVMIKAYGISKSCEKACELFES 529
Query: 153 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE------WESGCATYDIRVTNVMIGA 206
+ +Y ++Q+L + D+P KC+ E + S C Y +I +
Sbjct: 530 MMSYGVTPDKCTYNTLVQILAS-ADMPDKAKCYLEKMRETGYVSDCIPY-----CAVISS 583
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ K G+L AEE+ + +P+ + + + + G+++ A+ +E + G
Sbjct: 584 FVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 639
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 13/268 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKA L E M + +N+L+ + A P+K +++M+ + + D Y
Sbjct: 520 CEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCA 579
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + ++ AE V +EM + + D + L + + + G ++A ++ ++
Sbjct: 580 VISSFVKLGQLNMAEEVYKEM-VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEA 638
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-----RLAFPN--TANISYLNMIQVLVN 174
+ Y LI LY + G L E I+R L +P+ T+N MI +
Sbjct: 639 GIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNC----MINLYSQ 694
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ AE F+ + + +M+ Y K GR E A ++ ++ R + +
Sbjct: 695 RSMVRKAEAIFESMKQRREANEFTFA-MMLCMYKKNGRFEEATQIAKQMREMRILTDPLS 753
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ Y +G K AV+ ++ + +G
Sbjct: 754 YNSVLGLYALDGRFKEAVETFKEMVSSG 781
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 144/369 (39%), Gaps = 57/369 (15%)
Query: 16 NLGFSSMPFNSLMTLYAKTGHPEK-------------IPAII-------------QEMKA 49
++ SS +N+++ Y K+G ++ +P + Q +
Sbjct: 292 HVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEV 351
Query: 50 SSIM--------PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+S+M PD+ TYN+ + NDI A +EMK G + D ++ L
Sbjct: 352 TSLMKTMKFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAG-LKPDPVSYRTLLYA 410
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + ++AE + E+++ + D L +Y + L + + ++ +A N +
Sbjct: 411 FSIRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVA-GNMS 469
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT---NVMIGAYAKEGRLENAEE 218
+ Y I L AE+ F C + R NVMI AY E A E
Sbjct: 470 SEGYSANIDAYGERGYLSEAERVF----ICCQEVNKRTVLEYNVMIKAYGISKSCEKACE 525
Query: 219 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC-LEKAIDTGRGDGGKWVPSSETIR 277
L E G P+ T+ L + DM C LEK +TG +P I
Sbjct: 526 LFESMMSYGVTPDKCTYNTLVQ-ILASADMPDKAKCYLEKMRETGY--VSDCIPYCAVIS 582
Query: 278 TFMRHFEQEKDVDGAEGFLEILKKAVD---DLGVEVFEPLIRTYAAAGRTSPVMLRRLKM 334
+F++ + ++ AE E+ K+ V+ + V V+ LI +A G M M
Sbjct: 583 SFVKLGQ----LNMAE---EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAM 635
Query: 335 EKVEVSEAS 343
++ + E S
Sbjct: 636 KEAGIPENS 644
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 81/202 (40%), Gaps = 8/202 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI---- 79
+ +L+ +Y+K G + +M + PD T + ++ + AE
Sbjct: 224 YGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWS 283
Query: 80 -EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+E K D V T++ + Y ++G ++A K + + +I +YG
Sbjct: 284 CDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYG 343
Query: 139 QTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
G EV + ++++ P+T +Y +I + D+ A FKE + D
Sbjct: 344 NNGQFGEVTSLMKTMKFHCAPDTR--TYNILISLHTKNNDIERAGTYFKEMKGAGLKPDP 401
Query: 198 RVTNVMIGAYAKEGRLENAEEL 219
++ A++ ++ AEEL
Sbjct: 402 VSYRTLLYAFSIRHMVKEAEEL 423
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + ++M+E+ + + +NS++ LYA G ++ +EM +S I PD T+
Sbjct: 733 EEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 792
Query: 63 MRALAAVNDISGAERVIEEMKR 84
L + A R IEE+++
Sbjct: 793 GTILIKLGMSKKAVRKIEEIRK 814
>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Brachypodium distachyon]
Length = 500
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 14/272 (5%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+ ++ + PE A ++M+ I PD+YT N+ + A A+ ++ A ++++EM
Sbjct: 172 NTFISAALRLKRPEIAVAFFRQMRRCCISPDTYTANMMLAAFCALGRVADAAKMLDEMPE 231
Query: 85 DGRVAADWTTFSNLASIYVEA-GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V +F+ L + Y G E A + +E D Y +I + +
Sbjct: 232 WG-VYRTVVSFNTLIAAYCRGHGGLENALELKRRMEKEGCAPDAVTYNTIIHGLCKERQM 290
Query: 144 SEVYRI---WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
+ ++ R +R+A PNT ++Y +I V L D A + +E DI
Sbjct: 291 RQANQLLIEMRVMRVA-PNT--VTYNMLIHGHVMLGDNKTASRVREEMVKNGLQLDIVTY 347
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N +I +EG+++ +E L + +RG +PNA T+ + + + + A+ L
Sbjct: 348 NTLILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQNSERALQLLNVMKK 407
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+G + P+ +T + + F + KD +GA
Sbjct: 408 SG------FHPNYDTFKIVVSTFCKNKDFEGA 433
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L +M++ ++ +N+++ K + ++ EM+ + P++ TYN+
Sbjct: 256 ENALELKRRMEKEGCAPDAVTYNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNML 315
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + D A RV EEM ++G + D T++ L G +++E L+EL+ R
Sbjct: 316 IHGHVMLGDNKTASRVREEMVKNG-LQLDIVTYNTLILGLCREGKVKESEHLLQELDKRG 374
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ S + LIT + +T N ++ ++ + + ++ ++ KD GA
Sbjct: 375 LEPNASTFAALITGHWKTQNSERALQLLNVMKKSGFHPNYDTFKIVVSTFCKNKDFEGAV 434
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
K+ C D + + +K +L AE+L+ R
Sbjct: 435 DVMKDILGRCMAPDKALLHEFFDGLSKAKKLHLAEDLRSADR 476
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KAE L+ +M++ + S FN+L+ Y G EK ++ +M+ I D ++
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478
Query: 61 VWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
++A I A ++++M +D VA + ++++ Y+E+G E+A +++++
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKD--VAPNAQVYNSIIDAYIESGDTEQALLLVEKMK 536
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N + Y L+ ++ + E + +LR +SY +I N D
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTD 596
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + +E +R + ++ A A GR+ + E L ++ + +P++ + I
Sbjct: 597 KALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 656
Query: 240 DYYLR-NGDMKLA 251
D Y+R D K+A
Sbjct: 657 DAYVRCENDSKVA 669
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ + E + L +++ +N+L+ Y + I ++MK+ I PD TYN +
Sbjct: 352 KAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + ++ AE ++ EM++ G V TF+ L Y AG EK L +++ +
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ ++ ++ + + G + E I + + PN Y ++I + D A
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ--VYNSIIDAYIESGDTEQA 528
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ ++ + I N+++ + +++ AEEL R +G P+ ++
Sbjct: 529 LLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 588
Query: 242 YLRNGDMKLAVDCLEK 257
GD A++ L++
Sbjct: 589 CCNKGDTDKALELLQE 604
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 1/236 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L++ +TG ++ A++ EM + S++PD +TY++ L + + E
Sbjct: 267 YNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESL 326
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G + +T S L + + G KA++ + L + Y LI Y Q +L
Sbjct: 327 KKGVMLGAYTC-SILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDL 385
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ I+ ++ +I+Y +I L L+ + AE E E + N +
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
I AY G+LE + +++G + ++ + +NG + AV L+ I
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMI 501
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+A L+EKMK + S + +N L+ ++ ++ +I ++ + PD +YN
Sbjct: 525 TEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A D A +++EM + G + T L S AG E +++ ++
Sbjct: 585 IISACCNKGDTDKALELLQEMNKYG-IRPTLRTCHTLVSALASAGRVHDMECLYQQMLHK 643
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---LAFPNT 160
N S Y ++ Y + N S+V + + + +AF +T
Sbjct: 644 NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 137/352 (38%), Gaps = 20/352 (5%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ ++M ++ + + + +N+++ + K G E + +M P+ TYNV + L
Sbjct: 216 VFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLC 275
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ +++EM + D T+S L G + E + L
Sbjct: 276 RTGRMDETRALMDEMASHSML-PDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM--L 332
Query: 128 SAYQFLITLYG--QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
AY I L G + G +++ +++ L + Y +I ++DL GA F
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
++ +S D N +I K + AE+L + G DP+ +T+ D Y
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFMRHFEQEKDVDGAEGFLE--ILKKA 302
G LEK K + S + + ++ F + + A L+ I K
Sbjct: 453 GQ-------LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEA---SKKLLEAIC 351
+ +V+ +I Y +G T +L KM+ VS + LL+ +C
Sbjct: 506 APN--AQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLC 555
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 103/270 (38%), Gaps = 7/270 (2%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD+++YNV + L S A +V +EM G VA + T++ + +V+ G E R
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMG-VAPNRITYNTMIDGHVKGGDLEAGFR 250
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
++ + ++ Y L++ +TG + E + + +Y + L
Sbjct: 251 LRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+ F E ++++ K+G++ A+++ E G P
Sbjct: 311 RTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTV 370
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
+ + Y + D++ A E+ P T + + + V AE
Sbjct: 371 IYNTLINGYCQVRDLRGAFCIFEQM------KSRHIRPDHITYNALINGLCKLEMVTKAE 424
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ ++K+ D VE F LI Y AG+
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 454
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 45/282 (15%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
G M +N+++ Y G + ++ EM + PD+YTYN +R L + A
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALA 179
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V++EM R R D T++ L + +++A + L E+ ++ D+ Y ++
Sbjct: 180 VLDEMLRR-RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
Q G + + LK+LP GC +
Sbjct: 239 CQEGRVDDAIEF-------------------------LKNLP---------SYGCEPNTV 264
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
V+ G E R E+AEEL ++G PN T+ + + R G ++ A++ LE+
Sbjct: 265 SYNIVLKGLCTAE-RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 323
Query: 258 AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
G P+S + + F ++K +D A FL+++
Sbjct: 324 IPKYG------CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A +LE++ + +S+ +N L+ + K +K A + M + PD +YN
Sbjct: 313 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 372
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ AL ++ A ++ ++K G A +++ + +AG ++A L E+ +
Sbjct: 373 TLLTALCRSGEVDVAVELLHQLKDKG-CAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ Y + + + + R + ++ + Y +I L ++
Sbjct: 432 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 491
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
A F +GC + T ++I A EG ++ A +L + RG
Sbjct: 492 AIDLFAYMIGNGCMPNESTYT-ILIEGLAYEGLIKEARDLLDELCSRG 538
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A A+L++M + + L+ K ++ ++ EM+ PD TYNV
Sbjct: 174 TANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNV 233
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + A ++ + G + +++ + A +E AE + E+ +
Sbjct: 234 VVNGICQEGRVDDAIEFLKNLPSYG-CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 292
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ + LI+ + G + + + ++SY ++ K + A
Sbjct: 293 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 352
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
S DI N ++ A + G ++ A EL + + +G P ++ D
Sbjct: 353 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 412
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ G K A++ L + + G
Sbjct: 413 LTKAGKTKEALELLNEMVSKG 433
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+ +M + + + FN L++ + G E +++++ P+S +YN
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 339
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + A ++ M G D +++ L + +G + A L +L+++
Sbjct: 340 LHAFCKQKKMDKAMAFLDLMVSRG-CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L +Y +I + G E + + I+Y + L + A
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F + + + + N +I K +A +L G PN T+ I +
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
G +K A D L++ G
Sbjct: 519 AYEGLIKEARDLLDELCSRG 538
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +K E +L MKE ++ S+ +NSLM +Y++ G EK AI+ E+K+S + PD Y+YN
Sbjct: 621 MVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYN 680
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ EMK G V D T++ YV +FE+A ++ L
Sbjct: 681 TVIYAYGRKGQMKEASRLFSEMKCSG-VKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVA 739
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + Y ++ Y + G + E +L +P +
Sbjct: 740 QGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPKIYPGIS 780
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +L+KM+ S + +NSL++ Y K G E+ + QEM+ + PD TY
Sbjct: 308 EEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTL 367
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + I A EM R+G + + T++ L ++ G F + +L +
Sbjct: 368 ISGLDRIGKIDAALATYSEMVRNG-CSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAG 426
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + L+ ++GQ G SEV +++ ++ A +Y+++I A
Sbjct: 427 YVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 486
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ +K DI N ++ A A+ GR AE+L R P+ ++
Sbjct: 487 EIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSY 539
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 126/313 (40%), Gaps = 42/313 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL++ Y++ G ++ I + M + I PD TYN + ALA AE++ EM+
Sbjct: 469 YVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEME 528
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEK--------------------------------- 110
D D ++S+L Y A +K
Sbjct: 529 -DRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSL 587
Query: 111 --AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 168
E+A +EL R D++ ++++YG+ + +V + ++ N + +Y ++
Sbjct: 588 SETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSL 647
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + L D E E +S D N +I AY ++G+++ A L + G
Sbjct: 648 MHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGV 707
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
P+ T+ IF Y+ N + A+D + + G P+ T + + + +
Sbjct: 708 KPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQG------CKPNERTYNSILEGYCRHGR 761
Query: 289 VDGAEGFLEILKK 301
+ A+ FL L K
Sbjct: 762 MVEAKSFLSNLPK 774
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 4/244 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWM 63
A A+ +M + + + + +N ++ +Y+K P +++ ++ MK I D YTYN +
Sbjct: 204 AVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDSMKEDGIELDRYTYNTLI 263
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A ++ +EMK G D TF++L +Y +A E+A LK++EN
Sbjct: 264 SCCRRRGLYREAAQMFDEMKAAG-FEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGC 322
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI+ Y + G L E + + + ++Y +I L + + A
Sbjct: 323 TPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALA 382
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E +GC+ ++ N +I + G+ + + R G P+ TW +
Sbjct: 383 TYSEMVRNGCSP-NLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVF 441
Query: 243 LRNG 246
+NG
Sbjct: 442 GQNG 445
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A + ++MK + FNSL+ +Y K E+ ++++M+ + P TYN +
Sbjct: 274 EAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLI 333
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A + A + +EM+ G + D T++ L S G + A E+
Sbjct: 334 SAYVKDGLLEEALELKQEMEFRG-MKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGC 392
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+L Y LI ++G G +E+ ++ LR A +++ ++ V
Sbjct: 393 SPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSG 452
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
FKE + + +I +Y++ G + A E+ +R G P+ T+
Sbjct: 453 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALA 512
Query: 244 RNG 246
R G
Sbjct: 513 RGG 515
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 95/241 (39%), Gaps = 39/241 (16%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI--EE 81
+ +L++ +++ G A+ + M + P TYNV + + ++ + E V+ +
Sbjct: 188 YTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMS-VPWKEVVVLVDS 246
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
MK DG + D T++ L S GL+ +A + E++ D + L+ +YG+
Sbjct: 247 MKEDG-IELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKAR 305
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E I VL K+ E+ T + N
Sbjct: 306 RHEEA----------------------IGVL-------------KKMENAGCTPSVVTYN 330
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+I AY K+G LE A ELK+ RG P+ T+ R G + A+ + +
Sbjct: 331 SLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRN 390
Query: 262 G 262
G
Sbjct: 391 G 391
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 135/333 (40%), Gaps = 25/333 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTY 59
M KA A+ ++K ++ +NS++ + G EK+ + EM PD+ TY
Sbjct: 170 MISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTY 229
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGR--VAADWTT----FSNLASIYVEAGLFEKAER 113
+ + A + A R++ EMK +G A +T F L +++ GLFE
Sbjct: 230 SALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFE---- 285
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQV 171
E+ ++ D+ Y LI G+ G E Y + +R P+T I+ NMI
Sbjct: 286 ---EMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVIN--NMINF 340
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA-YAKEGRLENAEELKERARRRGADP 230
L L A K F+E + + N +I A + + R+ ER + G P
Sbjct: 341 LGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISP 400
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
+ T+ I D + + + A+ LE+ + G + P + + + K D
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKG------FPPCPAAYCSLIDALGKAKRYD 454
Query: 291 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
A + LK+ V+ +I+ AGR
Sbjct: 455 IAHELFQELKENCGSSSARVYAVMIKHLGKAGR 487
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 112/297 (37%), Gaps = 39/297 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL +MK+ + ++ + L+ L+ K + + +EM+ PD +TY
Sbjct: 243 DSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTEL 302
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R L A EM+R+G D +N+ + +AG + A + +E+
Sbjct: 303 IRGLGKAGRFDEAYNFFHEMRREG-CRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQ 361
Query: 123 AHRDLSAYQFLI-TLYGQTGNLSEVY-----------------------------RIWRS 152
+ Y +I L+ +SE+ R ++
Sbjct: 362 CIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKA 421
Query: 153 LRL-------AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+ L FP +Y ++I L K A + F+E + C + RV VMI
Sbjct: 422 MMLLEEMDEKGFP-PCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIK 480
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
K GRL++A L + + G PN + R G + A+ + + + G
Sbjct: 481 HLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHG 537
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 2/233 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL-AAVNDISGAERVIEEM 82
N+++ K G + + +EM +P TYN ++AL + + IS E M
Sbjct: 334 INNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERM 393
Query: 83 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 142
K G ++ T+S L + + EKA L+E++ + +AY LI G+
Sbjct: 394 KGSG-ISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 452
Query: 143 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
+ +++ L+ +++ Y MI+ L L A F E T ++ N
Sbjct: 453 YDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNA 512
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
++ A+ G L+ A R + G P+ ++ I + + G A++ L
Sbjct: 513 LMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEML 565
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M +L + +N+LM+ A+ G ++ ++ M+ +PD +YN+
Sbjct: 489 DDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNII 548
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ LA A ++ MK+ + D +++ + AGLFE+A + +KE+
Sbjct: 549 LNGLAKTGGPHRAMEMLSNMKQSA-IKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLG 607
Query: 123 AHRDLSAYQFLITLYGQTGN 142
DL Y ++ G+ +
Sbjct: 608 FEYDLITYSSILEAIGKVDH 627
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 88/210 (41%), Gaps = 5/210 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
TEKA LLE+M E GF P + SL+ K + + QE+K + + Y
Sbjct: 418 TEKAMMLLEEMDE--KGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVY 475
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
V ++ L + A + +EM + G + ++ L S AG+ ++A ++ ++
Sbjct: 476 AVMIKHLGKAGRLDDAVNLFDEMNKLG-CTPNVYAYNALMSGLARAGMLDEALTTMRRMQ 534
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
D+++Y ++ +TG + +++ + +SY ++ + +
Sbjct: 535 EHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFE 594
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
A K KE YD+ + ++ A K
Sbjct: 595 EAAKLMKEMNVLGFEYDLITYSSILEAIGK 624
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A + +M+E +N ++ AKTG P + ++ MK S+I PD+ +YN
Sbjct: 522 MLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYN 581
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 98
+ A++ A ++++EM G D T+S++
Sbjct: 582 TVLGAMSHAGLFEEAAKLMKEMNVLG-FEYDLITYSSI 618
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 9/273 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI-MPDSYTYNVWMRAL 66
LL K LNL ++ FN L+ + K G + +++EMK S + P+ TY+ + L
Sbjct: 187 LLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGL 246
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE---NRNA 123
+ A + EEM ++ D T++ L + + EK +RALK +E
Sbjct: 247 CGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHG---EKVDRALKIMEFMKKNGC 303
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ ++ Y L+ + + G L E ++ ++ + Y +I + A +
Sbjct: 304 NPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAME 363
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
K+ D NV++G +EGR E A + ER G N ++ I +
Sbjct: 364 LLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLC 423
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 276
R G+++ A + + GRG + S+E +
Sbjct: 424 REGELQKATQLV--GLMLGRGVLPHFATSNELL 454
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A ++E MK+ + +++LM + K G E+ + EMK+ + PD+ Y
Sbjct: 288 VDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTT 347
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A ++++M R+ + AD TF+ + G FE+A L+ L
Sbjct: 348 LINFFCRAGRVDEAMELLKDM-RENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYE 406
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRI 149
+ + ++Y+ ++ + G L + ++
Sbjct: 407 GVYLNKASYRIVLNSLCREGELQKATQL 434
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 139/321 (43%), Gaps = 28/321 (8%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE L ++M L S + +N+L+ Y K G+PEK + + MKA +I P T+N ++
Sbjct: 606 AEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLK 665
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR-NA 123
L + AE V+ EMK G V D TFS L Y +KA+ AL E ++
Sbjct: 666 GLFKAGMVEDAENVLTEMKDQGFV-PDAFTFSILFDGYSSN---DKADAALGVYETAVDS 721
Query: 124 HRDLSAYQFLITLY-----GQTGNLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVNLKD 177
++AY I L GQ E+ + R + PN + Y MI D
Sbjct: 722 GLKMNAYTCSILLNALCKEGQIEKAEEI--LGREMAKGLVPN--EVLYNTMIDGYSRKGD 777
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
L GA E D N +I + + G +ENAE+ + + +G P+ +T+ I
Sbjct: 778 LVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNI 837
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y R + D L++ D G +P+ + T + + + A +
Sbjct: 838 LIGGYGRKYEFDKCFDLLKEMEDNGT------MPNVVSYGTLINCLCKGSKLLEA----Q 887
Query: 298 ILKKAVDDLGVEVFEPLIRTY 318
I+K+ ++D GV P +R Y
Sbjct: 888 IVKRDMEDRGV---SPNVRIY 905
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK+ + E+MK N+ S + FN+L+ K G E ++ EMK +PD++T+++
Sbjct: 639 EKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSIL 698
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ ND + A + E D + + T S L + + G EKAE L +
Sbjct: 699 FDGYSS-NDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKG 757
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I Y + G+L ++ +++Y +I+ L D+ AE
Sbjct: 758 LVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAE 817
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ + + + + N++IG Y ++ + +L + G PN ++
Sbjct: 818 QEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 121/319 (37%), Gaps = 48/319 (15%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K L +MK + + +N L+ K + + EM A ++P TYN +
Sbjct: 570 KGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLI 629
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + +V E MK D + TF+ L +AG+ E AE L E++++
Sbjct: 630 DGYCKDGNPEKSFKVRERMKADN-IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGF 688
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D A+ F I G + N L TA S L M A
Sbjct: 689 VPD--AFTFSILFDGYSSNDKA------DAALGVYETAVDSGLKM-----------NAYT 729
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
C ++++ A KEG++E AEE+ R +G PN + D Y
Sbjct: 730 C----------------SILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYS 773
Query: 244 RNGDM---KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
R GD+ ++ +D +EK G K P +R F + D++ AE + +K
Sbjct: 774 RKGDLVGARMKIDAMEK-------QGMK--PDHLAYNCLIRTFCELGDMENAEQEVNKMK 824
Query: 301 KAVDDLGVEVFEPLIRTYA 319
VE + LI Y
Sbjct: 825 LKGVSPSVETYNILIGGYG 843
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 36/253 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE +L + L + + +N+++ Y++ G I M+ + PD YN
Sbjct: 744 EKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCL 803
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R + D+ AE+ + +MK G V+ T++ L Y F+K LKE+E+
Sbjct: 804 IRTFCELGDMENAEQEVNKMKLKG-VSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNG 862
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
PN +SY +I L L A+
Sbjct: 863 ---------------------------------TMPNV--VSYGTLINCLCKGSKLLEAQ 887
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
++ E + ++R+ N++I +G++E+A E ++G + N T+ D
Sbjct: 888 IVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGL 947
Query: 243 LRNGDMKLAVDCL 255
NG + A D L
Sbjct: 948 SMNGKLAEAEDML 960
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 96/216 (44%), Gaps = 5/216 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE +L ++ L +NSL++ Y G+ ++ A+ +EMK S I P TY++ +
Sbjct: 955 EAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI 1014
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+L I +++ EM + D ++ + Y G +KA K++ ++
Sbjct: 1015 -SLCTKEGIELTKKIFGEMS----LQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSI 1069
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D + Y LI + G L EV + ++ +Y +++ +KD GA
Sbjct: 1070 GLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYV 1129
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
++E + D+ + + ++ +E R + AE +
Sbjct: 1130 WYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENV 1165
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA L ++M E ++G +NSL+ K G ++ ++I EMKA + P++ TY++
Sbjct: 1055 DKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDII 1114
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + D GA EM+ G + D L S E ++AE + E+ R
Sbjct: 1115 VKGHCEMKDYMGAYVWYREMQEKG-LLLDVCIGDELVSGLKEEWRSKEAENVISEMNGRK 1173
Query: 123 -----AHRDLSA 129
DLSA
Sbjct: 1174 LGDVIVDEDLSA 1185
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 5/214 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ G E +EM I + TYN + L+ ++ AE ++ E+
Sbjct: 905 YNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEIS 964
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R G + D T+++L S Y AG ++ +E++ L Y LI+L + G +
Sbjct: 965 RKG-LKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG-I 1022
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+I+ + L P+ + Y ++ D+ A K+ D N +
Sbjct: 1023 ELTKKIFGEMSLQ-PDL--LVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSL 1079
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
I K G+L L + + R +P A T++I
Sbjct: 1080 ILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDI 1113
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 30/349 (8%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +A+A ++M + + ++SL+ YA G ++ +++ ++A+ + P+ YN
Sbjct: 344 LDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKYQQAERVLEAIRAAGLTPNLVVYN 403
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE-------- 112
M A A S A V + ++ +G + D +F ++ Y ++ + ++A+
Sbjct: 404 SLMNAYANCQMPSKAREVFDRIEAEG-LQRDMVSFCSMMDAYAKSDMLKEAQETFDSMIA 462
Query: 113 RALKELENRNAHRDLSA------------YQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 160
+ +K + DLS Y LI+ Y + G + V ++ +
Sbjct: 463 QGMKPVYMLMQLLDLSGSLCSYGWWGSVGYSILISAYAKLGEMDGVLKLVDQIEKGQNGE 522
Query: 161 ANISYLN-MIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEE 218
+I N +++V N + G K+ ++ GC + D N++IG +AKE + A +
Sbjct: 523 CDILLFNTLLKVYCNAGYMDGVTAVLKKMDAEGCGS-DRGTFNILIGYFAKEDLGDLALK 581
Query: 219 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 278
E RG PN T+ Y++NG M+ + LE G P++ +++T
Sbjct: 582 TLEDMETRGHRPNEATYNALFQGYVKNGKMEEMFEALEAMKQRG------ITPTNLSLQT 635
Query: 279 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV 327
M + +D + LK L V E L+ G+ V
Sbjct: 636 IMLGCIEHNRIDVVLAYFPYLKATGIALSYSVMERLVEALVETGQMDVV 684
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 2/207 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND-ISGAERVIEEMK 83
NS+++ G +K + +++K + PD+ TY+ + A D S A +IE++K
Sbjct: 262 NSILSTMIYNGKIDKAFRLFEQLKKEGLQPDTVTYSTVIAGCAKTRDGYSKALALIEDIK 321
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D + + ++ GL +A+ +E+ + +L Y L+ Y G
Sbjct: 322 ASG-LTQDAVIYGAMMNVCASQGLDREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKY 380
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ R+ ++R A + Y +++ N + A + F E+ D+ M
Sbjct: 381 QQAERVLEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDRIEAEGLQRDMVSFCSM 440
Query: 204 IGAYAKEGRLENAEELKERARRRGADP 230
+ AYAK L+ A+E + +G P
Sbjct: 441 MDAYAKSDMLKEAQETFDSMIAQGMKP 467
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/229 (17%), Positives = 99/229 (43%), Gaps = 2/229 (0%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRALAAVNDISGAER 77
+ S+ ++ L++ YAK G + + ++ ++ K + D +N ++ + G
Sbjct: 487 WGSVGYSILISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDGVTA 546
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V+++M +G +D TF+ L + + L + A + L+++E R + + Y L Y
Sbjct: 547 VLKKMDAEG-CGSDRGTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQGY 605
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
+ G + E++ +++ N+S ++ + + F ++
Sbjct: 606 VKNGKMEEMFEALEAMKQRGITPTNLSLQTIMLGCIEHNRIDVVLAYFPYLKATGIALSY 665
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
V ++ A + G+++ ++ + G P+ KTW++ Y+ G
Sbjct: 666 SVMERLVEALVETGQMDVVKDALHLMQTTGQQPSQKTWDLVLQKYVSLG 714
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 5/262 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE +L+K E L + FN+++ Y + G K I++M+A + P+ TYN
Sbjct: 374 EKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSL 433
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + ++ AE+ I++M G V + T++ L Y + LF++ + L+E+E +
Sbjct: 434 VKKFCEMKNMEEAEKCIKKMVEKG-VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG 492
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ +Y LI + N+ E I + R PN A I Y +I L
Sbjct: 493 LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPN-AQI-YNMLIDGSCIAGKLKD 550
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F E + + N++I K+G++ AE L R+G + T+
Sbjct: 551 AFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLIS 610
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y G+++ A++ E +G
Sbjct: 611 GYSSAGNVQKALELYETMKKSG 632
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 36/279 (12%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE L ++M + + + + +N+L+ Y K G E+ I + MK ++ P T+N +
Sbjct: 236 AEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLN 295
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWT------------------------------- 93
L + A+RV+EEM+ G V +T
Sbjct: 296 GLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQI 355
Query: 94 ---TFSNLASIYVEAGLFEKAERALKE-LENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
T S L + + G EKAE LK+ LEN A + + ++ Y Q G++++ Y
Sbjct: 356 LDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGV-FFNTIVNGYCQVGDINKAYTT 414
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
+ +++Y ++++ +K++ AEKC K+ ++ N +I Y +
Sbjct: 415 IEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGR 474
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ E ++G PN ++ + ++ ++
Sbjct: 475 SCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANI 513
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 10/230 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L ++ L F + +NSL++ Y+ G+ +K + + MK S I P T N +
Sbjct: 585 EAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKP---TLNTYH 641
Query: 64 RALAAVND--ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
R +A + E++ +EM + V D ++ L YVE G +KA +E +
Sbjct: 642 RLIAGCGKEGLVLVEKIYQEMLQMNLV-PDRVIYNALIHCYVEHGDVQKACSLHSAMEAQ 700
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLP 179
D Y LI + + G + +V + +++ P T +Y +I LKD
Sbjct: 701 GIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTE--TYDILIVGHCKLKDFD 758
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
GA ++E T + + + +I +EGR +A+ + +G D
Sbjct: 759 GAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGKD 808
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 138/357 (38%), Gaps = 57/357 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M K + +L + LNL S+ T E + E+ S + PD + Y
Sbjct: 136 MLMKKDGVLPSVASLNLFLESL---------VSTKRYEDTLQLFSEIVESGLRPDQFMYG 186
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++A + D+ A ++ MKR G V+ ++ + + + AE+ E+ +
Sbjct: 187 KAIQAAVKLGDLKRAIELMTCMKRGG-VSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLD 245
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R + Y LI Y + G L E + I +++ I++ +++ L + +
Sbjct: 246 RRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEE 305
Query: 181 AEKCFKEWES------------------GCATYDIRVT-----------------NVMIG 205
A++ +E E C D +T ++++
Sbjct: 306 AQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLN 365
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
A KEG +E AEE+ ++ G P + + Y + GD+ A +EK G
Sbjct: 366 ALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG--- 422
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD---LGVEVFEPLIRTYA 319
P+ T + ++ F + K+++ AE + +KK V+ VE + LI Y
Sbjct: 423 ---LRPNHVTYNSLVKKFCEMKNMEEAE---KCIKKMVEKGVLPNVETYNTLIDGYG 473
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 140/354 (39%), Gaps = 46/354 (12%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL +M+ L + + + +LM+ + G EKI +++ EM+ + P+ YN + AL
Sbjct: 316 LLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALC 375
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
S A V+++M G D TFS L S + G ++AER L+E + +L
Sbjct: 376 KCRSASQALVVLKQMFAGG-CDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNL 434
Query: 128 SAYQFLITLY-------------------GQT----------------GNLSEVYRIWRS 152
S+Y LI + G T G +SE +
Sbjct: 435 SSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREK 494
Query: 153 L--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+ R P+ ANI Y +I L K LP A +E D V +I + +
Sbjct: 495 MAARQLLPD-ANI-YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRN 552
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
L+ A ++ E ++G P+ + Y + G M AV+C+ GR +
Sbjct: 553 ESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGR------I 606
Query: 271 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
P T T + + ++ ++ GA L + K V + LI Y G T
Sbjct: 607 PDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDT 660
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 1/234 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL +M E + F +L+ G + + ++M A ++PD+ YNV +
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + A +IEEM + V D ++ L ++ ++A + + +E + H
Sbjct: 513 GLCKKKMLPAARNLIEEML-EQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIH 571
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ Y +I Y Q G ++E ++R +Y +I ++ GA
Sbjct: 572 PDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSL 631
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ ++ + +I Y K G + AE L +G PN T+ I
Sbjct: 632 LCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTIL 685
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 6/262 (2%)
Query: 2 TEKAEALLEKMK--ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
++AE LL + ELN SS + SL+ + G ++ EM PD T+
Sbjct: 415 VQEAERLLRETTRWELNPNLSS--YTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTF 472
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ L +S A V E+M ++ D ++ L S + + A ++E+
Sbjct: 473 GALIHGLVVAGQVSEALLVREKMAAR-QLLPDANIYNVLISGLCKKKMLPAARNLIEEML 531
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+N H D Y LI + + +L E +I+ + + + Y MI+ +
Sbjct: 532 EQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMN 591
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A +C D +IG YAK+G + A L +R PN +
Sbjct: 592 EAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLI 651
Query: 240 DYYLRNGDMKLAVDCLEKAIDT 261
+ Y + GD A +CL ++++
Sbjct: 652 NGYCKLGDTD-AAECLFGSMES 672
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 13/241 (5%)
Query: 3 EKAEALL--EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPA---IIQEMKASSIMPDSY 57
+ +EALL EKM L + +N L++ K + +PA +I+EM ++ PD Y
Sbjct: 484 QVSEALLVREKMAARQLLPDANIYNVLISGLCKK---KMLPAARNLIEEMLEQNVHPDKY 540
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
Y + + A ++ E M++ G + D ++ + Y + G+ +A +
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKG-IHPDVVGYNAMIKGYCQFGMMNEAVECMST 599
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNL 175
+ D Y LI Y + GN+S + + R PN ++Y ++I L
Sbjct: 600 MRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNV--VAYSSLINGYCKL 657
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
D AE F ES ++ ++IG+ K+ ++ A E PN T
Sbjct: 658 GDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTL 717
Query: 236 E 236
Sbjct: 718 H 718
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 5/174 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A L+E+M E N+ + +L+ + + ++ I + M+ I PD YN
Sbjct: 519 MLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYN 578
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ ++ A + M++ GR+ D T++ L Y + G A L ++
Sbjct: 579 AMIKGYCQFGMMNEAVECMSTMRKVGRI-PDEFTYTTLIGGYAKQGNISGALSLLCDMMK 637
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVL 172
R ++ AY LI Y + G+ ++ S+ + FPN I+Y +I L
Sbjct: 638 RRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNV--ITYTILIGSL 689
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 129/309 (41%), Gaps = 16/309 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A +LE+M ++ N ++ K G + + M + PD+ +Y
Sbjct: 300 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 359
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ L A+ +++EM R + TF+ I + GL E+A ++++
Sbjct: 360 TVLKGLCRAERWEDAKELLKEMVRKN-CPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y L+ + G + ++ S+ PNT I+Y ++ L N + L
Sbjct: 419 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK-PNT--ITYTTLLTGLCNAERLDA 475
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + E + CA ++ NV++ + ++G ++ A EL E+ G PN T+
Sbjct: 476 AAELLAEMLQKDCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
D ++ + + A++ L + G P T + + +E V+ A I
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVS------PDIVTYSSIIGVLSREDRVEEAIKMFHI- 587
Query: 300 KKAVDDLGV 308
V DLG+
Sbjct: 588 ---VQDLGM 593
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/251 (16%), Positives = 101/251 (40%), Gaps = 3/251 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +L++M+ + + +N ++ + G + + + + PD+ +Y +
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ L A E + EM + + TF L + G+ E+A + L+++
Sbjct: 258 KGLCAAKRWEDVEELFAEMM-EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + +I + G + + ++ ++ + ISY +++ L + A++
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE C ++ N I ++G +E A L E+ G + N T+ + +
Sbjct: 377 LLKEMVRKNCPPNEVTF-NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 243 LRNGDMKLAVD 253
G + A++
Sbjct: 436 CVQGRVDSALE 446
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +LL+ M S + + L+ K+ + ++ EM+A P+ TYNV +
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + A + + G D +++ + A +E E E+ +N
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAE 182
+ + L+ + + G + ++ + AN + N+ I + + A
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMS-GHGCAANTTLCNIVINTICKQGRVDDAF 340
Query: 183 KCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ S GC+ I T V+ G E R E+A+EL + R+ PN T+ F
Sbjct: 341 QFLNNMGSYGCSPDTISYTTVLKGLCRAE-RWEDAKELLKEMVRKNCPPNEVTFNTFICI 399
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ G ++ A +E+ + G
Sbjct: 400 LCQKGLIEQATMLIEQMSEHG 420
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 4/182 (2%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD Y +R L S A RV+ +R G A D ++ L + Y G + A R
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG-TAVDVFAYNTLVAGYCRYGQLDAARR 134
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+ + D Y +I G + E + + + ++Y +++ +
Sbjct: 135 LIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
A + E + T +I NV+I +EGR+++A E R G P+
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251
Query: 234 TW 235
++
Sbjct: 252 SY 253
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 94/235 (40%), Gaps = 8/235 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A+ LL++M N + + FN+ + + + G E+ +I++M + TYN
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + M + T++ L + A + A L E+ ++
Sbjct: 432 VNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + L++ + Q G + E + + PN I+Y ++ + +
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL--ITYNTLLDGITKDCNSEE 545
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A + S + DI + +IG ++E R+E A ++ + G P A +
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIY 600
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 99/273 (36%), Gaps = 45/273 (16%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y + G + +I M + PD+YTY +R L + A ++++M
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 172
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G T++ L ++ F +A L E+ + ++ Y +I + G +
Sbjct: 173 HRG-CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ L +SY + LK L A K WE
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTV------LKGLCAA----KRWE-------------- 267
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ EEL + PN T+++ ++ R G ++ A+ LE+ +G
Sbjct: 268 -----------DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM--SGH 314
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
G + I T + + VD A FL
Sbjct: 315 GCAANTTLCNIVINTICK----QGRVDDAFQFL 343
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L++ + G + A++ EM + ++PD +TY++ + D + EE
Sbjct: 261 YNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESV 320
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G V T S L + + G KAE L+ L N + Y LI Y Q G+L
Sbjct: 321 KKG-VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ I++ ++ +I+Y +I L ++ + A E E + N +
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
I AY + G+LE + + +G PN ++ + + +NG + AV L+
Sbjct: 440 IDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILD 492
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/334 (19%), Positives = 120/334 (35%), Gaps = 46/334 (13%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
+ EM +++P+ TYN + D+ R+ +M R G + + T++ L S
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHG-LKPNVITYNVLLSGL 268
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN-------------------- 142
AG + L E+ +R D Y L + +TG+
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328
Query: 143 ---------------LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+S+ + ++L + + Y +I + DL GA F++
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+S D N +I K R+ A +L + G +P+ +T+ D Y R G
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE--ILKKAVDD 305
++ L + G P+ + + + F + + A L+ +K +
Sbjct: 449 LEKCFIILSDMQEKG------LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLP- 501
Query: 306 LGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 339
G +V+ +I Y G T + KM+ V
Sbjct: 502 -GAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV 534
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 106/249 (42%), Gaps = 10/249 (4%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD++T+N ++A D+ A ++ M DG A + +++ + + +AG A +
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQV 171
E+ + + Y +I + + G+L +R+W + LR PN I+Y ++
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNV--ITYNVLLSG 267
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
L + E S D +++ +++ G + L E + ++G
Sbjct: 268 LCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIG 327
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
A T I + ++G + A + L+ +++G + ++ T + + Q D++G
Sbjct: 328 AYTCSILLNGLCKDGKISKAEEVLQTLVNSG------LLQTTVIYNTLINGYCQIGDLEG 381
Query: 292 AEGFLEILK 300
A + +K
Sbjct: 382 AFSIFQQMK 390
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 1/225 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +L M+E L + + + S++ + K G + AI+ +M ++P + YN
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A + E+MK G V T++ L + +AE L L N
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSG-VPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYG 568
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ +Y LI+ N + + + + +Y + L + E
Sbjct: 569 LAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEME 628
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+++ + N+M+ AYAK G E L++ +G
Sbjct: 629 NLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKG 673
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LL M+ +G + + FN+++ Y + G +K I M+ I D YTYN
Sbjct: 290 EAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTL 349
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L VN + A++++ M +G V +++ +++ L SI+ + G +A R +++E +
Sbjct: 350 ACGLCRVNRMEDAKKLLHIMTENG-VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKG 408
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + Y +I Y ++G++ E R + + + P+ + L + D+
Sbjct: 409 SRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDV-- 466
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + F+E + A ++ +I AKEGR E A + + G P+ + +
Sbjct: 467 ALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSML 524
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 1/246 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL++M + ++ +N L+ Y + + ++ +++EM++ + P TY +
Sbjct: 150 DDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTIL 209
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L+ DIS E V +E+KR VA D +S + + Y AG +A E
Sbjct: 210 VDGLSTAGDISKVESVFDEIKRK-NVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNG 268
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + + G + + ++L I + MI + A
Sbjct: 269 IEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKAL 328
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E D+ N + + R+E+A++L G + N ++ +
Sbjct: 329 EIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIH 388
Query: 243 LRNGDM 248
+ GDM
Sbjct: 389 SKEGDM 394
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 1/209 (0%)
Query: 31 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA 90
+ K G + ++ EM + ++ YN + + + V++EM+ G V
Sbjct: 143 FCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG-VEP 201
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
T++ L AG K E E++ +N D+ Y +I Y + GN+ ++
Sbjct: 202 TVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVF 261
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+Y +I + + AE + + ++ + N MI Y +
Sbjct: 262 DECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRH 321
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFS 239
G ++ A E+K R G + T+ +
Sbjct: 322 GMVDKALEIKAVMERMGIQLDVYTYNTLA 350
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 2/181 (1%)
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ +AG + A R L E+ + Y L+ Y + N + V + + +
Sbjct: 143 FCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPT 202
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+Y ++ L D+ E F E + D+ + +I AY + G + A E+ +
Sbjct: 203 VGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFD 262
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
G +PN +T+ + + + G ++ A L RG G + + I + R
Sbjct: 263 ECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDM--QLRGVGHNQIIFNTMIDGYCR 320
Query: 282 H 282
H
Sbjct: 321 H 321
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S IMPD YN
Sbjct: 24 LFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIMPDLVVYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V D +++ L ++YVE F +A E+
Sbjct: 84 SMINVFGKAKLFREARSLISEMRTAG-VMPDTVSYTALLTMYVENKKFLEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ S+R +SY +++V + +
Sbjct: 143 IKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PNA T+
Sbjct: 203 AIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A EK +G
Sbjct: 263 IWGKVGKLDRAAILFEKLRSSG 284
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQD-RVRGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A L+ DL Y +I ++G+ E + +R A +SY ++
Sbjct: 63 AISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLT 122
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ V K A F E D+ N+MI Y + G + A++L R+ G +P
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEP 182
Query: 231 NAKTWEIFSDYYLRNGDMKL 250
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + + +NS++ ++ K + ++I EM+ + +MPD+ +Y +
Sbjct: 62 KAISIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALL 121
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V EM R+ + D TT + + +Y + G+ ++A++ +
Sbjct: 122 TMYVENKKFLEALSVFAEM-REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGI 180
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y L+ +YG E ++R ++ ++Y +M+ + + A
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANN 240
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E +S + + +I + K G+L+ A L E+ R G + + ++ Y
Sbjct: 241 LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYE 300
Query: 244 RNG 246
R G
Sbjct: 301 RAG 303
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/152 (18%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +++ ++++++++ K G ++ + +++++S I D Y
Sbjct: 236 EKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +S A+R++ E+K + D I AG E+A ++ +
Sbjct: 296 IVAYERAGLVSHAKRLLHELKTPDNIPRDTAI-----HILARAGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
+D++ ++ +I L+ + S + ++ +R
Sbjct: 351 EVKDITVFERMIDLFSKYKKYSNIVEVFDKMR 382
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A +L EKM + ++ + SL+ + K G E I +EM + PD N
Sbjct: 245 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 304
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+M + + + E+ G + D ++S L V+AGL + ++ +
Sbjct: 305 YMDCVFKAGETEKGRALFREINAHGFIP-DARSYSILIHGLVKAGLANETYELFYAMKEQ 363
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D AY +I + ++G +++ Y++ +++ ++Y ++I L + L A
Sbjct: 364 GCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEA 423
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E +S ++ V + +I + K GR++ A + E ++G PN TW D
Sbjct: 424 YMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 483
Query: 242 YLRNGDMKLAVDCLEKAID 260
++ ++ A+ C + D
Sbjct: 484 LVKAEEINEALICFQSMKD 502
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 113/292 (38%), Gaps = 47/292 (16%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L MKE + +N+++ + K+G K +++EMK P TY + LA
Sbjct: 356 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 415
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR------ 121
++ + A + EE K +G + + +S+L + + G ++A ++EL +
Sbjct: 416 KIDRLDEAYMLFEEAKSNG-IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 474
Query: 122 -----------------------NAHRDLSA------YQFLITLYGQTGNLSEVYRIWRS 152
+ +DL Y LI + ++ + W+
Sbjct: 475 YTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQE 534
Query: 153 L-RLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
+ +L PNT I+Y MI L ++ A F +++ D N MI +
Sbjct: 535 MQKLGLKPNT--ITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSA 592
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ +A L E R +G + + KT + D + +CLE+A G
Sbjct: 593 NKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK-------AECLEQAAIVG 637
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 7/223 (3%)
Query: 101 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 160
+ +A ++A ++LE AY +I YG G E Y + +
Sbjct: 64 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 123
Query: 161 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 220
+ I+Y ++ L + + A + F+E + A ++ N++I +EG+L A E++
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRD-AVPNVPTYNILIDMLCREGKLNAALEIR 182
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
+ R G PN T I D + ++ A E D P++ T + +
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM------DDKVCTPNAVTFSSLI 236
Query: 281 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ VD A E + G V+ LIR++ GR
Sbjct: 237 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGR 279
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/278 (18%), Positives = 107/278 (38%), Gaps = 35/278 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E++++ + +N+++ Y G ++ +++ KA +P YN
Sbjct: 72 DEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCI 131
Query: 63 MRALAAVNDISGAERVIEEMKRD------------------GRVAADWTT---------F 95
+ L + A R+ EEMKRD G++ A F
Sbjct: 132 LTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLF 191
Query: 96 SNLASIYV------EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
N+ ++ + +A E+A + ++++ + + LI G+ G + + Y +
Sbjct: 192 PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL 251
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYA 208
+ + I Y ++I+ K +KE +GC+ D+ + N +
Sbjct: 252 YEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP-DLTLINTYMDCVF 310
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
K G E L G P+A+++ I ++ G
Sbjct: 311 KAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 348
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 96/236 (40%), Gaps = 5/236 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEK AL ++ + ++ L+ K G + + MK + D++ YN
Sbjct: 315 TEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNA 374
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ++ A +++EEMK G T+ ++ + ++A +E ++
Sbjct: 375 VIDGFCKSGKVNKAYQLLEEMKVKGH-PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 433
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPG 180
++ Y LI +G+ G + E Y I L + T N+ N ++ LV +++
Sbjct: 434 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL-MQKGLTPNVYTWNCLLDALVKAEEINE 492
Query: 181 AEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A CF+ + C I + ++I + + A + ++ G PN T+
Sbjct: 493 ALICFQSMKDLKCPPNQITYS-ILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITY 547
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++M++L L +++ + ++++ AK G+ + + KA+ +PDS +YN +
Sbjct: 527 KAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 586
Query: 64 RALAAVNDISGAERVIEEMKRDG 86
L++ N A + EE + G
Sbjct: 587 EGLSSANKAMDAYALFEETRLKG 609
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 149/360 (41%), Gaps = 20/360 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A + + M E + ++ + SL+ +A + ++ +++EM+ PD YN
Sbjct: 203 LVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYN 262
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A ++ GA V ++M+R G A D T+S L IY G FE+ ++++
Sbjct: 263 SLIEAYADAGNVHGAAGVFKQMQRGG-CAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKD 321
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ ++ Y LI ++G+ G E ++ + + + +Y ++ V
Sbjct: 322 LSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTRE 381
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K + + +T + + +I +Y K ++A R R G DP ++
Sbjct: 382 AAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQ 441
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEIL 299
Y + G A L G P S ++ + M + + D A E F E+
Sbjct: 442 GYAKGGLYVEAGSTL-----YAMNKAGFQAPVS-SVNSVMEAYSKVGLHDEALEFFSELQ 495
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKK-------LLEAICV 352
+K ++ E L+ Y G +L K E V + E SK LL ++CV
Sbjct: 496 QKEGSEVDERTHETLLGVYCDMG-----LLEEAKEEFVIIKETSKVPGARVYCLLLSLCV 550
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 18/269 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ +L MK+L+ + +NSL+ ++ + G+ ++ + +M S + PD TY+
Sbjct: 310 EQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYS-- 367
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFS-----NLASIYVEAGLFEKAERALKE 117
AL +V G R E K + + +T S L S Y + +++ A +
Sbjct: 368 --ALLSVCGRGGLTR--EAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYR 423
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ---VLVN 174
+ +SAY LI Y + G E ++ A A +S +N + V
Sbjct: 424 IREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKA-GFQAPVSSVNSVMEAYSKVG 482
Query: 175 LKDLPGAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
L D A + F E + + D R ++G Y G LE A+E + P A+
Sbjct: 483 LHD--EALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGAR 540
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ + +R A L++ I G
Sbjct: 541 VYCLLLSLCVRRSKWDYATQLLDEMIAAG 569
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 9/296 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y + G + ++ EM + PD TY++ + A A +++EM+
Sbjct: 302 YNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 361
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
DG V FS + + + + G ++KA L+E++ D Y +I +G+ L
Sbjct: 362 ADG-VKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCL 420
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNV 202
+ +R +++ +I A + F+E ES C N+
Sbjct: 421 GHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPP-GTTTYNI 479
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
MI ++ R E E + + +G PN T+ D Y R+G K A+DC+E
Sbjct: 480 MINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAM---- 535
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
+ DG K PS + + Q D A ++ +K ++ + V LI +
Sbjct: 536 KADGLK--PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF 589
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 95/216 (43%), Gaps = 5/216 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A LL++M+ + SS F+ ++ + G +K A+++EM+AS + PD + YNV
Sbjct: 351 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVM 410
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N + A + M R+ + D T++ L + + G ++A +E+ N
Sbjct: 411 IDTFGKYNCLGHAMDAFDRM-REEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESN 469
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
+ Y +I L G+ V + ++ PN I+Y ++ V
Sbjct: 470 CPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNI--ITYTTLVDVYGRSGRYKE 527
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
A C + ++ + + ++ AYA+ G ++A
Sbjct: 528 AIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHA 563
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++M+E + + +N+L+ + K G ++ + +EM+ S+ P + TYN+ + L
Sbjct: 427 FDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGE 486
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
G E ++ EMK G V + T++ L +Y +G +++A ++ ++ +
Sbjct: 487 QERWEGVEAMLSEMKEQGLV-PNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPT 545
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLR 154
Y L+ Y Q G + ++++
Sbjct: 546 MYHALVNAYAQRGLADHALNVVKAMK 571
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 122/303 (40%), Gaps = 23/303 (7%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGA---ERVIEEMKRDGRVAADWTTFSNLA 99
++ ++ +PD +Y+ + +L D A ER++ ++ R+ R+ D FS+L
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDL-RESRLEPDAPLFSDLI 235
Query: 100 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-- 157
S + A L + A L + +A LI+ G G ++E ++ LA
Sbjct: 236 SAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEI 295
Query: 158 -PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
P T +Y +++ V + L AE+ E D ++++ AY + GR E+A
Sbjct: 296 KPRTR--AYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353
Query: 217 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGDG--------- 266
L + G P++ + + GD + A L + +G R D
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDT 413
Query: 267 -GKWVPSSETIRTF--MRHFEQEKDVDGAEGFLEI-LKKAVDDLGVEVFEPLIRTYAAAG 322
GK+ + F MR E E DV ++ K D +E+FE + + G
Sbjct: 414 FGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPG 473
Query: 323 RTS 325
T+
Sbjct: 474 TTT 476
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E EA+L +MKE L + + + +L+ +Y ++G ++ I+ MKA + P Y+
Sbjct: 491 EGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHAL 550
Query: 63 MRALAAVNDISGAERVIEEMKRDG 86
+ A A A V++ MK DG
Sbjct: 551 VNAYAQRGLADHALNVVKAMKADG 574
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 27/312 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E++ E + ++ +NSL+ Y G ++P IIQ M+ I PD TY +
Sbjct: 290 DEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTIL 349
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ ++ ++ G + + T+S L + + GL +AE L E+ +
Sbjct: 350 IAGHCESGDVEEGMKIRNDILDQG-LQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIG 408
Query: 123 AHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANISYLNMIQVLVNL--KD 177
D+ AY LI Y + G + EV + + P + LN + +LV L K
Sbjct: 409 LDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTS-----LNHLSILVGLCKKG 463
Query: 178 LPGAEKCFKE-----WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
L + + E ++ G D+ + NV+I YAK G + NA L ++ G P
Sbjct: 464 LLVEARWYLENVAVKYQPG----DVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTI 519
Query: 233 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
T Y + GD++ A + +AI +P+ T T M + V+
Sbjct: 520 VTCNSILYGYCKCGDLQ-AAESYFRAIQI-----SSLLPTMVTYTTLMDALSEAGKVNTM 573
Query: 293 EGFL-EILKKAV 303
L E+++K +
Sbjct: 574 LSILYEMVEKGI 585
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 1/198 (0%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
M FN LM+ G + + + M + PD YTY+ + L + + A + E
Sbjct: 239 MSFNVLMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFER 298
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
+ +G + + T+++L + Y GL + + ++ + + D+ Y LI + ++G
Sbjct: 299 VTEEG-MKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESG 357
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
++ E +I + ++Y ++ L + AE E S DI +
Sbjct: 358 DVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYS 417
Query: 202 VMIGAYAKEGRLENAEEL 219
++I Y K G +E A E+
Sbjct: 418 ILIHGYCKLGEIERALEV 435
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 130/319 (40%), Gaps = 17/319 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
A A E M+ + + + +L+ YA A ++EM+A + P++ TY+V
Sbjct: 209 HSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVI 268
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + D+ AER + + D ++N+ Y +AG E+AE + +E +
Sbjct: 269 ISGYGRLGDVEAAERWFQRALSENWHHND-VIYNNIIHAYCKAGNMERAEAIMTAMEEQG 327
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN---ISYLNMIQVLVNLKDLP 179
L Y L+ Y + + ++R L+ + +SY +I + L +
Sbjct: 328 LEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMD 387
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + E E ++ + +++I Y + G NA + E G P+ T+ I
Sbjct: 388 KALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILM 447
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ + +NG M A++ L R + G P+ T + F + D L +
Sbjct: 448 NAFCKNGQMNRALELL------ARMESGDCPPTLRTYTIIIDGFMKIGD-------LRMA 494
Query: 300 KKAVDDLGVEVFEPLIRTY 318
+ V D+ + F P TY
Sbjct: 495 FETVRDMKMAGFRPSAATY 513
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/262 (18%), Positives = 110/262 (41%), Gaps = 3/262 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A ++ E M + + +N LM + K G + ++ M++ P TY +
Sbjct: 421 TANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTI 480
Query: 62 WMRALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + D+ A + +MK G R +A T++ + +AG ++A + E+
Sbjct: 481 IIDGFMKIGDLRMAFETVRDMKMAGFRPSA--ATYNVIMHGLAQAGQMDRAASIIDEMVV 538
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H + +Y LI Y G++ ++ + ++ I+Y ++++ +
Sbjct: 539 AGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQS 598
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E + + + N+++ +A+ G + A ++ ++ R G P+ ++ F +
Sbjct: 599 TLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFIN 658
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ GDM A + +E+ G
Sbjct: 659 ACCKAGDMLKATETIEQMKQQG 680
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 126/329 (38%), Gaps = 8/329 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E AE ++ N + + +N+++ Y K G+ E+ AI+ M+ + YN+
Sbjct: 278 VEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNM 337
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWT--TFSNLASIYVEAGLFEKAERALKELE 119
M + V +K T ++ L ++Y + G +KA + E+E
Sbjct: 338 LMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEME 397
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
++ + Y +I Y Q G+ + + ++ + A I+Y ++ +
Sbjct: 398 DQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMN 457
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + ESG +R ++I + K G L A E + G P+A T+ +
Sbjct: 458 RALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIM 517
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ G M A +++ + G P+ + T + + D+ A + +
Sbjct: 518 HGLAQAGQMDRAASIIDEMVVAGVH------PNERSYTTLIEGYACIGDMGLAFKYFNRI 571
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVM 328
K+ V + L++ AGR +
Sbjct: 572 KEVGLKPDVIAYASLLKACCKAGRMQSTL 600
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 134/348 (38%), Gaps = 42/348 (12%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+ E L + + + L+ LY+K G +K I EM+ I + TY++ +
Sbjct: 358 LKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQ 417
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+ D + A V E+M G + D T++ L + + + G +A L +E+ + L
Sbjct: 418 LGDTANAFSVFEDMSNAG-IKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLR 476
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNTANI----------------------- 163
Y +I + + G+L + R +++A P+ A
Sbjct: 477 TYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEM 536
Query: 164 ----------SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
SY +I+ + D+ A K F + D+ ++ A K GR+
Sbjct: 537 VVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRM 596
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 273
++ + G N + I D + + GDM A D ++K G P
Sbjct: 597 QSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEG------LTPDI 650
Query: 274 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
+ +F+ + D+ A +E +K+ ++ + LI +A+A
Sbjct: 651 HSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASA 698
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%)
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
+ L+ YG+ G+ + S+R A SY N+I +DL GA C +E E
Sbjct: 195 HTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEME 254
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
+ + + +V+I Y + G +E AE +RA N + Y + G+M+
Sbjct: 255 AEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNME 314
Query: 250 LA 251
A
Sbjct: 315 RA 316
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A+ +M + ++ +N L+ +A+ G + I+Q+M+ + PD ++Y ++ A
Sbjct: 601 AITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINAC 660
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
D+ A IE+MK+ G V + ++ L + A EKA E+++ D
Sbjct: 661 CKAGDMLKATETIEQMKQQG-VQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPD 719
Query: 127 LSAYQFLIT 135
Y ++T
Sbjct: 720 KPLYHCIMT 728
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA +E+MK+ + + + +L+ +A +PEK EMK++ ++PD Y+ M
Sbjct: 668 KATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIM 727
Query: 64 RAL---AAV---NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
+L AAV G RV EM G + D+ T + ++A
Sbjct: 728 TSLLSRAAVARETVFDGVLRVTSEMVDQG-ICVDFATAKHWQRFLIKA 774
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 5/264 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A + L+KM++ + + +++L+ L K K +I +K S I PD YN
Sbjct: 209 MFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYN 268
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +++EM R V D ++S L +++VE F +A + E++
Sbjct: 269 TMINVFGKAKLFREARFLLKEM-RAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKE 327
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRI-WRSLRLAF-PNTANISYLNMIQVLVNLKDL 178
N DL+ +I +YGQ + E R+ WR ++ PN +SY +++V +
Sbjct: 328 VNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNV--VSYNTILRVYGEAELF 385
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A F+ + ++ N MI Y K E A L + ++RG +PNA T+
Sbjct: 386 GEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTI 445
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTG 262
+ + G + + +K +G
Sbjct: 446 ISIWGKAGKLDRSAMLFQKLRSSG 469
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 120/292 (41%), Gaps = 11/292 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +++ +MKE+N N ++ +Y + ++ + M+ I P+ +YN +
Sbjct: 317 EALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTIL 376
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R A + M+R + + T++ + IY + EKA +++++ R
Sbjct: 377 RVYGEAELFGEAIHLFRLMQRK-EIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGI 435
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y +I+++G+ G L +++ LR + + Y MI + A++
Sbjct: 436 EPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKR 495
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E + D I AK GR+E A + +A G + +E D +
Sbjct: 496 LLHELKQP----DNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFS 551
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
RN K ++ EK + G P+S+ I + + + +D D A+
Sbjct: 552 RNKKHKNVLEVFEKMRNVGH------FPNSDVIALVLNAYGKLRDFDTADAL 597
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 127/304 (41%), Gaps = 11/304 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ D YTY+ + A +++M++D RV+ D +SNL +
Sbjct: 180 GLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQD-RVSGDLVLYSNLIEL 238
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + KA L+ D+ AY +I ++G+ E + + +R
Sbjct: 239 SRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPD 298
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+SY ++ + V + A E + D+ N+MI Y + ++ A+ L
Sbjct: 299 TVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW 358
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-IRTFM 280
R R+ G +PN ++ Y G+ +L + + R + + V + T I+ +
Sbjct: 359 RMRKIGIEPNVVSYNTILRVY---GEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYG 415
Query: 281 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT--SPVMLRRLKMEKVE 338
+ E EK A ++ ++K + + +I + AG+ S ++ ++L+ E
Sbjct: 416 KTLEHEK----ATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAE 471
Query: 339 VSEA 342
+ +
Sbjct: 472 IDQV 475
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 109/238 (45%), Gaps = 14/238 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L++ M++ + +++ ++++++++ K G ++ + Q++++S D Y
Sbjct: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTM 480
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + A+R++ E+K+ + + +I +AG E+A ++ +
Sbjct: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPR-----TTAITILAKAGRIEEATWVFRQAFDAG 535
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
+D+S ++ +I L+ + V ++ +R FPN+ I+ + + L+D
Sbjct: 536 ELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALV--LNAYGKLRDFDT 593
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A+ + E E GC D V M+ Y + E L ER +DPN E+
Sbjct: 594 ADALYMEMQEEGCVFTD-EVHFQMLSLYGARNDYKRLESLFERL---DSDPNINKKEL 647
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 121/307 (39%), Gaps = 13/307 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + +M+ + + + +L+ +A+ G EK + ++M+ + PD Y YN M
Sbjct: 311 AMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALME 370
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + GA + M+ G D +++ L Y AGL +AE + L+ +
Sbjct: 371 AYSRAGFPQGASEIFSLMQHMG-CEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMA 429
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ ++ L++ + ++GN+ ++ L + + M+ L E+
Sbjct: 430 PTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERL 489
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR-----GADPNAKTWEIFS 239
+ + D+ NV + AYA+ G L E E RRR G D + +W
Sbjct: 490 LAAMDLA-GSADVGSHNVAVNAYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRM 548
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y R + ++ E+ +D G P + T + M E+ V+ + +
Sbjct: 549 GGYARKKEYGKCLEIFEEMVDAG------CYPDAGTAKVLMAACSDERQVEQVAAIVRSM 602
Query: 300 KKAVDDL 306
K L
Sbjct: 603 HKEAKTL 609
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 1/218 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KA + ++MK+ ++ + ++ +Y K+ P I EM++ + TY
Sbjct: 273 TVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTA 332
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A AE V E+M++ G D ++ L Y AG + A +++
Sbjct: 333 LVNAFAREGLCEKAEEVFEQMQQAGH-EPDVYAYNALMEAYSRAGFPQGASEIFSLMQHM 391
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D ++Y L+ YG+ G E + SL+ S++ ++ ++
Sbjct: 392 GCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRC 451
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E+ + D N M+ AYA+ GRL++ E L
Sbjct: 452 EQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERL 489
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 119/301 (39%), Gaps = 9/301 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ Y + K +I + + +P TY + +RA + AE VI EM+
Sbjct: 190 YNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQ 249
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + T ++ ++A KA + ++ + Y +I +YG++
Sbjct: 250 EHG-IPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYGKSKQP 308
Query: 144 SEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
+I+ ++ + ANI +Y ++ AE+ F++ + D+ N
Sbjct: 309 MSAMKIFNEMQ-SIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNA 367
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++ AY++ G + A E+ + G +P+ ++ I D Y R G + A E G
Sbjct: 368 LMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQG 427
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P+ ++ + + +V E + L K+ ++ YA AG
Sbjct: 428 ------MAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAG 481
Query: 323 R 323
R
Sbjct: 482 R 482
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 100/245 (40%), Gaps = 1/245 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE++ + E + + L+ Y + +I EM+ I P + YN ++
Sbjct: 205 KAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYL 264
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L A V + MK++ R + T++ + ++Y ++ A + E+++
Sbjct: 265 DGLLKARCTVKAVEVYQRMKKE-RCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGC 323
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ Y L+ + + G + ++ ++ A +Y +++ GA +
Sbjct: 324 KANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASE 383
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F + D N+++ AY + G AE E +++G P K+ + +
Sbjct: 384 IFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHA 443
Query: 244 RNGDM 248
R+G++
Sbjct: 444 RSGNV 448
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 3/198 (1%)
Query: 50 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 109
SS PD YN+ + A ++ AE + + + + T++ L Y A
Sbjct: 181 SSFRPDIICYNLLIDAYGRKRQLNKAESIYAAV-LEAQCVPTEDTYALLLRAYCNARSLH 239
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
+AE + E++ + Y + + + +++ ++ T +Y MI
Sbjct: 240 RAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMI 299
Query: 170 QVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
V K A K F E +S GC +I ++ A+A+EG E AEE+ E+ ++ G
Sbjct: 300 NVYGKSKQPMSAMKIFNEMQSIGCKA-NICTYTALVNAFAREGLCEKAEEVFEQMQQAGH 358
Query: 229 DPNAKTWEIFSDYYLRNG 246
+P+ + + Y R G
Sbjct: 359 EPDVYAYNALMEAYSRAG 376
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 129/309 (41%), Gaps = 16/309 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A +LE+M ++ N ++ K G + + M + PD+ +Y
Sbjct: 331 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 390
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ L A+ +++EM R + TF+ I + GL E+A ++++
Sbjct: 391 TVLKGLCRAERWEDAKELLKEMVRKN-CPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y L+ + G + ++ S+ PNT I+Y ++ L N + L
Sbjct: 450 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK-PNT--ITYTTLLTGLCNAERLDA 506
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + E + CA ++ NV++ + ++G ++ A EL E+ G PN T+
Sbjct: 507 AAELLAEMLQKDCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
D ++ + + A++ L + G P T + + +E V+ A I
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVS------PDIVTYSSIIGVLSREDRVEEAIKMFHI- 618
Query: 300 KKAVDDLGV 308
V DLG+
Sbjct: 619 ---VQDLGM 624
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/251 (16%), Positives = 101/251 (40%), Gaps = 3/251 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +L++M+ + + +N ++ + G + + + + PD+ +Y +
Sbjct: 229 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 288
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ L A E + EM + + TF L + G+ E+A + L+++
Sbjct: 289 KGLCAAKRWEDVEELFAEMM-EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 347
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + +I + G + + ++ ++ + ISY +++ L + A++
Sbjct: 348 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 407
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE C ++ N I ++G +E A L E+ G + N T+ + +
Sbjct: 408 LLKEMVRKNCPPNEVTF-NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 466
Query: 243 LRNGDMKLAVD 253
G + A++
Sbjct: 467 CVQGRVDSALE 477
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +LL+ M S + + L+ K+ + ++ EM+A P+ TYNV +
Sbjct: 194 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 253
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + A + + G D +++ + A +E E E+ +N
Sbjct: 254 NGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 312
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAE 182
+ + L+ + + G + ++ + AN + N+ I + + A
Sbjct: 313 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMS-GHGCAANTTLCNIVINTICKQGRVDDAF 371
Query: 183 KCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ S GC+ I T V+ G E R E+A+EL + R+ PN T+ F
Sbjct: 372 QFLNNMGSYGCSPDTISYTTVLKGLCRAE-RWEDAKELLKEMVRKNCPPNEVTFNTFICI 430
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ G ++ A +E+ + G
Sbjct: 431 LCQKGLIEQATMLIEQMSEHG 451
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 4/182 (2%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD Y +R L S A RV+ +R G A D ++ L + Y G + A R
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG-TAVDVFAYNTLVAGYCRYGQLDAARR 165
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+ + D Y +I G + E + + + ++Y +++ +
Sbjct: 166 LIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 222
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
A + E + T +I NV+I +EGR+++A E R G P+
Sbjct: 223 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 282
Query: 234 TW 235
++
Sbjct: 283 SY 284
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/235 (18%), Positives = 94/235 (40%), Gaps = 8/235 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A+ LL++M N + + FN+ + + + G E+ +I++M + TYN
Sbjct: 403 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 462
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + M + T++ L + A + A L E+ ++
Sbjct: 463 VNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 518
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + L++ + Q G + E + + PN I+Y ++ + +
Sbjct: 519 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL--ITYNTLLDGITKDCNSEE 576
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A + S + DI + +IG ++E R+E A ++ + G P A +
Sbjct: 577 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIY 631
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 99/273 (36%), Gaps = 45/273 (16%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y + G + +I M + PD+YTY +R L + A ++++M
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G T++ L ++ F +A L E+ + ++ Y +I + G +
Sbjct: 204 HRG-CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 262
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ L +SY + LK L A K WE
Sbjct: 263 DDAREFLNRLSSYGFQPDTVSYTTV------LKGLCAA----KRWE-------------- 298
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ EEL + PN T+++ ++ R G ++ A+ LE+ +G
Sbjct: 299 -----------DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM--SGH 345
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
G + I T + + VD A FL
Sbjct: 346 GCAANTTLCNIVINTICK----QGRVDDAFQFL 374
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 13/293 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LLEKM L + + ++ L+ YA G E+ ++ M S + PD + YN +
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L+ + A + E++ G + D TF Y + G +A + E+ +
Sbjct: 517 CLSKAGKMEEASTYLLEIQGRG-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 575
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + + GNL E I+R L P+ S I L+ + A
Sbjct: 576 PNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF--IHGLLKNGRVQEAL 633
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F E + D+ + +I + K+G +E A EL + +G PN + D
Sbjct: 634 KVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 693
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
++GD++ A + + G P S T T + + + ++V AE F
Sbjct: 694 CKSGDIQRARKLFDGMPEKG------LEPDSVTYSTMIDGYCKSENV--AEAF 738
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 125/313 (39%), Gaps = 44/313 (14%)
Query: 12 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
M + +GF + L+ KTG ++ EM + P+ + Y++ + + V D
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
I A + M G V + T++ + + A +A+ +E++ D +A
Sbjct: 279 IDEAVELKRSMGEKGLVPNTY-TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 337
Query: 132 FLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
LI + + G++ EV RI + P +N+I
Sbjct: 338 ALIDGFMREGDIDEVLRIKDVMVSCGIP-------INLI--------------------- 369
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
TY NV+I K G++E A E+ + G PN++T+ + + Y R +M
Sbjct: 370 ---TY-----NVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGR 421
Query: 251 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV 310
A++ L++ + VPS+ + + KD+ A LE + + V V
Sbjct: 422 ALELLDEM------EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 475
Query: 311 FEPLIRTYAAAGR 323
+ LI YA+ GR
Sbjct: 476 YSILIMAYASEGR 488
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 5/210 (2%)
Query: 22 MPFNSLMTL----YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
MP N L T+ + K G+ + +I + + A ++PD T + ++ L + A +
Sbjct: 575 MPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALK 634
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V E+K G V D T+S+L S + + G EKA E+ + ++ Y L+
Sbjct: 635 VFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 693
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
++G++ +++ + +++Y MI +++ A F E S
Sbjct: 694 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHS 753
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRG 227
V N ++ KEG +E A L ++G
Sbjct: 754 FVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 121/298 (40%), Gaps = 8/298 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L + M E L S+ +++++ Y K+ + + ++ EM + + P S+ YN
Sbjct: 700 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ A + EM + G A +F+ L Y ++ ++A + +E+ +
Sbjct: 760 VHGCCKEGDMEKAMNLFREMLQKG--FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 817
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y +I + + G + E +++ ++ ++Y +++ L
Sbjct: 818 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F++ + D ++I A+ KE L A +L++ +G ++
Sbjct: 878 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 937
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ D+ A L++ + G PS T +R F + +D A E +K
Sbjct: 938 CKREDLTEASKLLDEMGELG------LKPSLAACNTLVRSFHEAGKMDEATRVFEGVK 989
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 8/261 (3%)
Query: 44 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 103
+EM+ + + PD + + DI R+ + M G + + T++ L
Sbjct: 321 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCG-IPINLITYNVLIHGLC 379
Query: 104 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 163
+ G EKA LK + + + LI Y + N+ + + + +
Sbjct: 380 KFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAV 439
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
SY MI L + KDL A K ++ ++ V +++I AYA EGR+E A L +
Sbjct: 440 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM 499
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
G P+ + + G M+ A L + GRG P + T F+ +
Sbjct: 500 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI--QGRG----LKPDAVTFGAFILGY 553
Query: 284 EQE-KDVDGAEGFLEILKKAV 303
+ K + A+ F E+L +
Sbjct: 554 SKTGKMTEAAKYFDEMLDHGL 574
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L ++M+E NL ++ + SLM Y K G ++ A+ ++M A + PD TY +
Sbjct: 839 EEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLV 898
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +++ A ++ +E+ G + T L + + +A + L E+
Sbjct: 899 IYAHCKEDNLVEAFKLRDEVVGKGMLTKG-TIHDLLITALCKREDLTEASKLLDEMGELG 957
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIW---RSLRLAFPNTANISYLN 167
L+A L+ + + G + E R++ +SL L T I +N
Sbjct: 958 LKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 1005
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 105/279 (37%), Gaps = 42/279 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA +L+ M L +S F L+ Y + + + ++ EM+ +++P + +Y
Sbjct: 385 EKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 444
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+S A +++E+M G + + +S L Y G E+A R L +
Sbjct: 445 INGLCHCKDLSLANKLLEKMTFSG-LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y +I+ + G + E +YL IQ
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEAS----------------TYLLEIQG----------- 536
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + T+ I Y+K G++ A + + G PN + + + +
Sbjct: 537 ---RGLKPDAVTF-----GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
+ G++ A+ + G +P +T F+
Sbjct: 589 FKAGNLMEALSIFRRLHALG------VLPDVQTCSAFIH 621
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 41/288 (14%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI---PAIIQEMKASSIMPDSYTYN 60
+A ++E MK + + + +N+L+ Y K G K+ AI++EM A I P+ TYN
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYN 232
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG------------------------------RVAA 90
+ + ++SGA RV EM+R G V++
Sbjct: 233 ILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS 292
Query: 91 DW----TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
D T + L + + + +A ++E + + Y LI Y + G + +
Sbjct: 293 DLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDA 352
Query: 147 YRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
+ ++ + R FP + +Y +I L D+ A E S + D+ N++I
Sbjct: 353 FALYNMMIDRGIFPEVS--TYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILI 410
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
+ K+G A +L + +G +P+ T+ D Y R G+++ A+
Sbjct: 411 DSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 10/281 (3%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
S + N L++ K + + +EM I + ++N+ + L V ++ A V
Sbjct: 118 LSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDV 177
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA---LKELENRNAHRDLSAYQFLIT 135
IE+MK G V+ + T++ L Y + G K +A LKE+ + + Y LI
Sbjct: 178 IEDMKVWG-VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILID 236
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
+ + N+S R++ ++ ++Y +I L + + A + S
Sbjct: 237 GFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP 296
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
++ NV+I + K + A L ++G DPNA T+ D Y ++G M+ A
Sbjct: 297 NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
ID G P T + ++ DV A +
Sbjct: 357 NMMIDRG------IFPEVSTYNCLIAGLCRKGDVKAARSLM 391
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 93/245 (37%), Gaps = 36/245 (14%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A L M++ + ++M + +L+ Y K G E A+ M I P+ TYN
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNC 373
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L D+ A ++ EM +++AD T++ L + G KA + L E+ +
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSK-KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEK 432
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y L+ Y + GNL I R+
Sbjct: 433 GLNPSHVTYNTLMDGYCREGNLRAAL-IVRT----------------------------- 462
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E ++ NV+I + +GRLE+A L RG PN T+EI +
Sbjct: 463 -----RMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEE 517
Query: 242 YLRNG 246
+ G
Sbjct: 518 MMEKG 522
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 133/332 (40%), Gaps = 14/332 (4%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA-- 65
++++ ELN+ + FN ++ K G + +I++MK + P+ TYN +
Sbjct: 146 MIKRKIELNV----ISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201
Query: 66 -LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ + + A+ +++EM G + + T++ L + + A R E++ +
Sbjct: 202 KMGRIGKMYKADAILKEMVAKG-ICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y LI G + E + + + +++ +I K + A
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F + E + +I AY K+GR+E+A L RG P T+ R
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
GD+K A + + + + V + I + + E K V + E+ +K ++
Sbjct: 381 KGDVKAARSLMNEMV--SKKLSADVVTYNILIDSLCKKGESRKAVKLLD---EMFEKGLN 435
Query: 305 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
V + L+ Y G ++ R +ME+
Sbjct: 436 PSHV-TYNTLMDGYCREGNLRAALIVRTRMER 466
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 110/251 (43%), Gaps = 4/251 (1%)
Query: 9 LEKMKELN---LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
L+ ++ELN L S+ + +L+ + A E+ + +MK P+ + Y+ + A
Sbjct: 129 LDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIFHYSSLLNA 188
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
++ + AE ++++MK G V + + L +YV GLFEK+ L EL+ +
Sbjct: 189 YSSDGNYKKAEELVQDMKSSGLV-PNKVILTTLLKVYVRGGLFEKSRDLLVELDTLGFAK 247
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
+ Y L+ + G L E ++ ++ + SY MI A++
Sbjct: 248 NEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKSGGYSYSIMISSFCRGGLFEEAKELA 307
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+E+E+ YD+ + N ++ AY + G E+ + P+ T+ I Y+ +
Sbjct: 308 EEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELAISPDYNTFHILIKYFCKE 367
Query: 246 GDMKLAVDCLE 256
LA +E
Sbjct: 368 KLYMLAYQTME 378
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 57/319 (17%), Positives = 115/319 (36%), Gaps = 47/319 (14%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND-ISGAERVIEEMK 83
NSL+ + + +MK + + PD+ TY+ + + D S A +++E+
Sbjct: 77 NSLLRCLVRNTKFDSSMKFFHKMKNNGLTPDAITYSTLLAGCMKIKDGYSKALDLVQELN 136
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + D + L ++ E+A+ ++++ ++ Y L+ Y GN
Sbjct: 137 YNG-LQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIFHYSSLLNAYSSDGNY 195
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ AE+ ++ +S + + +
Sbjct: 196 KK-----------------------------------AEELVQDMKSSGLVPNKVILTTL 220
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ Y + G E + +L G N + + D +NG + A + +
Sbjct: 221 LKVYVRGGLFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRV 280
Query: 264 GDGGKWVPSSETIRTFMRH--FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
GG S I +F R FE+ K++ AE F + D V + ++ Y
Sbjct: 281 KSGG--YSYSIMISSFCRGGLFEEAKEL--AEEF----EAKYDKYDVVILNTILCAYCRT 332
Query: 322 GRTSPVMLRRLKMEKVEVS 340
G VM KM+++ +S
Sbjct: 333 GEKESVMRTMRKMDELAIS 351
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EK+ LL ++ L + MP+ LM AK G ++ ++ EMK + Y+Y+
Sbjct: 229 LFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKSGGYSYS 288
Query: 61 VWMRALAAVNDISGAERVIEEM--KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ + + A+ + EE K D D + + Y G E R ++++
Sbjct: 289 IMISSFCRGGLFEEAKELAEEFEAKYD---KYDVVILNTILCAYCRTGEKESVMRTMRKM 345
Query: 119 ENRNAHRDLSAYQFLITLY 137
+ D + + LI +
Sbjct: 346 DELAISPDYNTFHILIKYF 364
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 45/278 (16%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
M +N+++ Y G + ++ EM + PD+YTYN +R L + A V++E
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M R R D T++ L + +++A + L E+ ++ D+ Y ++ Q G
Sbjct: 58 MLRR-RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+ + LK+LP GC +
Sbjct: 117 RVDDAIEF-------------------------LKNLP---------SYGCEPNTVSYNI 142
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
V+ G E R E+AEEL ++G PN T+ + + R G ++ A++ LE+
Sbjct: 143 VLKGLCTAE-RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 201
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
G P+S + + F ++K +D A FL+++
Sbjct: 202 G------CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/261 (17%), Positives = 100/261 (38%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A A+L++M + + L+ K ++ ++ EM+ PD TYNV
Sbjct: 48 TANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNV 107
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + A ++ + G + +++ + A +E AE + E+ +
Sbjct: 108 VVNGICQEGRVDDAIEFLKNLPSYG-CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 166
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ + LI+ + G + + + ++SY ++ K + A
Sbjct: 167 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA 226
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
S DI N ++ A + G ++ A EL + + +G P ++ D
Sbjct: 227 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 286
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ G K A++ L + + G
Sbjct: 287 LTKAGKTKEALELLNEMVSKG 307
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 101/244 (41%), Gaps = 9/244 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A +LE++ + +S+ +N L+ + K +K A + M + PD +YN
Sbjct: 187 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 246
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ AL ++ A ++ ++K G A +++ + +AG ++A L E+ +
Sbjct: 247 TLLTALCRSGEVDVAVELLHQLKDKG-CAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 305
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ Y + + + + R + ++ + Y +I L ++
Sbjct: 306 KGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHS 365
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F +GC + T ++I A EG ++ A +L + R + EI
Sbjct: 366 AIDLFAYMIGNGCMPNESTYT-ILIEGLAYEGLIKEARDLLDELCSRAGE------EILL 418
Query: 240 DYYL 243
D +L
Sbjct: 419 DVHL 422
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 99/255 (38%), Gaps = 1/255 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+ +M + + + FN L++ + G E +++++ P+S +YN
Sbjct: 154 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 213
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + A ++ M G D +++ L + +G + A L +L+++
Sbjct: 214 LHAFCKQKKMDKAMAFLDLMVSRG-CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L +Y +I + G E + + I+Y + L + A
Sbjct: 273 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 332
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F + + + + N +I K +A +L G PN T+ I +
Sbjct: 333 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392
Query: 243 LRNGDMKLAVDCLEK 257
G +K A D L++
Sbjct: 393 AYEGLIKEARDLLDE 407
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 60/344 (17%), Positives = 124/344 (36%), Gaps = 43/344 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL++M++ + +N ++ + G + ++ + + P++ +YN+
Sbjct: 84 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 143
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE--- 119
++ L AE ++ EM + G + TF+ L S GL E A L+++
Sbjct: 144 LKGLCTAERWEDAEELMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202
Query: 120 --------------------------------NRNAHRDLSAYQFLITLYGQTGNLSEVY 147
+R + D+ +Y L+T ++G +
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
+ L+ ISY +I L A + E S DI + +
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
+E R+E+A + + G PN + + + A+D I G
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG----- 377
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEV 310
+P+ T + E + A L E+ +A +++ ++V
Sbjct: 378 -CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDV 420
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 13/281 (4%)
Query: 16 NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
+L ++ NSL AK + + + ++M + + + YNV + A D+ A
Sbjct: 164 HLHACTVLLNSL----AKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKA 219
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
+ ++ EM+ V D T++ L S+Y + G+ +A +E D+ Y LI
Sbjct: 220 DNLLSEMESKC-VFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIH 278
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
+ + G + E R+++ +R A PN +++Y +I L DL A + +E E+
Sbjct: 279 GFCKEGRMREAMRLFKEIRDATPN--HVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYP 336
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
+ N ++ + GR+ +A +L + +P+ T + Y + GDMK A+
Sbjct: 337 TVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVK 396
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ ++ G T + + F + +++DGA+ L
Sbjct: 397 NRMVEAGLK------LDQFTYKALIHGFCKIREMDGAKELL 431
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 119/304 (39%), Gaps = 17/304 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EKA+ LL +M+ + +N+L++LY K G + ++ M+ I PD TYN
Sbjct: 216 VEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNS 275
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A R+ +E+ RD + T++ L Y ++A R +E+E +
Sbjct: 276 LIHGFCKEGRMREAMRLFKEI-RDA--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQ 332
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + Y ++ + G + + ++ + N++ +I + D+ A
Sbjct: 333 GLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSA 392
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K D +I + K ++ A+EL G P+ T+ D
Sbjct: 393 LKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDG 452
Query: 242 YLRNGD----MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y + +KL + + K + + R +R F + + VD A+
Sbjct: 453 YCNQQNEEAVLKLPDEFVRKGLCVDKS----------LYRALIRRFCKREQVDYAKKIFS 502
Query: 298 ILKK 301
++++
Sbjct: 503 LMQE 506
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 103/263 (39%), Gaps = 15/263 (5%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
FS L +Y + ++A + + + L A L+ + V+++++ +
Sbjct: 132 VFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191
Query: 154 -RLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
R+ ANI N +I D+ A+ E ES C D+ N +I Y K+G
Sbjct: 192 ARIGVE--ANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKG 249
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVP 271
A +++R R G P+ T+ + + G M+ A+ ++ D P
Sbjct: 250 MHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA--------TP 301
Query: 272 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--ML 329
+ T T + + + D+D A E ++ V + ++R GR +L
Sbjct: 302 NHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLL 361
Query: 330 RRLKMEKVEVSEAS-KKLLEAIC 351
+ +K+E + L+ A C
Sbjct: 362 NEMSEKKIEPDNVTCNTLINAYC 384
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 62/91 (68%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA+++KM+E+ + + +N+++ LYA+ G EK+ +++EM+ I + +TYNV
Sbjct: 154 KKAEAIMQKMREVGFMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVR 213
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWT 93
M A AA +DI+ E+++ +M+ D VA DW+
Sbjct: 214 MNAYAAASDITNMEKLLSKMEADPLVATDWS 244
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 134/302 (44%), Gaps = 10/302 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L +KM E+ L +++ +N+L+ Y G E+ + EM IMP TYN+
Sbjct: 314 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 373
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + A+ +I+EM++ G + D T++ L + Y G +KA E+ ++
Sbjct: 374 VHALFMEGRMGEADDMIKEMRKKG-IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
Y LI + + + E ++ + + I + M+ ++ A
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE + D N ++ +EG++E A L + +RRG P+ ++ Y
Sbjct: 493 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 552
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R GD+K A ++ + G + P+ T ++ + ++ D AE E+LK+
Sbjct: 553 GRRGDIKDAFRVRDEMLSIG------FNPTLLTYNALIKCLCKNQEGDLAE---ELLKEM 603
Query: 303 VD 304
V+
Sbjct: 604 VN 605
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 5/262 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L +M L + + FN ++ + K G +K I M+ P+ +YN
Sbjct: 209 EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTI 268
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ +I GA R+++ M+ G + D T+ +L S + G E+A ++
Sbjct: 269 IHGYSSRGNIEGARRILDAMRVKG-IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 327
Query: 123 AHRDLSAYQFLITLYGQTGNLSEV--YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y LI Y G+L YR + P+ + +Y ++ L +
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS--TYNLLVHALFMEGRMGE 385
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ KE D N++I Y++ G + A +L +G +P T+
Sbjct: 386 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIY 445
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
R MK A D EK +D G
Sbjct: 446 VLSRRNRMKEADDLFEKILDQG 467
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A LL++M ++ + FN+LM + G E+ ++ EMK I PD +YN
Sbjct: 488 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 547
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ DI A RV +EM G T++ L + + AE LKE+ N+
Sbjct: 548 LISGYGRRGDIKDAFRVRDEMLSIG-FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606
Query: 122 NAHRDLSAYQFLITLYGQTGNLSE 145
D S Y LI G L E
Sbjct: 607 GISPDDSTYLSLIEGMGNVDTLVE 630
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 125/289 (43%), Gaps = 7/289 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE + +M + + + F+S++ ++++ G + A ++MK ++PD+ Y + +
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 406
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+D+SGA ++ EM G V D T++ L + + + A+ KE+ R
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCV-MDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D LI Y + GN+++ ++ ++ L ++Y ++ + ++ A++
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ + S +++I + G + A L + + +G P T YL
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
R G++ A D L I G P T T + F +E++ D A
Sbjct: 586 RAGNLSKANDFLNTMISEGVP------PDCITYNTLINSFVKEENFDRA 628
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 1/251 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +A L++ M L +N+L+ K G E+ ++ EM + P++ T+N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ D+ AERV EM + G V D +FS++ ++ G +A ++++
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRG-VVPDLISFSSIVGVFSRNGELGRALAYFEKMKG 392
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y LI Y + ++S ++ + ++Y ++ L K L
Sbjct: 393 VGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDD 452
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A++ FKE D +I Y K+G + A L E R P+ T+ D
Sbjct: 453 ADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512
Query: 241 YYLRNGDMKLA 251
+ + G+M+ A
Sbjct: 513 GFCKVGEMEKA 523
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 1/249 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A+ L ++M E + +L+ Y K G+ K ++ + M S+ PD TYN
Sbjct: 449 MLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYN 508
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
M V ++ A+ + +M + + +FS L + + GL +A R E++
Sbjct: 509 TLMDGFCKVGEMEKAKELWYDMISR-EIFPSYISFSILINGFCSLGLVSEAFRLWDEMKE 567
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ L +I Y + GNLS+ ++ I+Y +I V ++
Sbjct: 568 KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDR 627
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A E ++ N ++G +++ GR++ AE + + +G +P+ T+ +
Sbjct: 628 AFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687
Query: 241 YYLRNGDMK 249
Y+ +MK
Sbjct: 688 GYVSKDNMK 696
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 9/252 (3%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L +M+E + + +N+L+ Y + G + ++ M + P +TYN + L
Sbjct: 247 LSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCK 306
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE---KAERALKELENRNAHR 125
A+RV++EM G + + TF+ + VE+ E +AER E+ R
Sbjct: 307 EGSYERAKRVLDEMLGVG-LCPNAATFN---PMLVESCRKEDVWEAERVFNEMLQRGVVP 362
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
DL ++ ++ ++ + G L + ++ + Y +I D+ GA K
Sbjct: 363 DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMR 422
Query: 186 KEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E E GC D+ N ++ + L++A+EL + RG P+ T Y +
Sbjct: 423 NEMVERGCVM-DVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCK 481
Query: 245 NGDMKLAVDCLE 256
+G+M A+ E
Sbjct: 482 DGNMTKALSLFE 493
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 116/282 (41%), Gaps = 12/282 (4%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N+L+ K G + + ++ S + + YT N+ + AL + + EM+
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 252
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G V AD T++ L + Y GL +A + + + L Y LI + G+
Sbjct: 253 KG-VYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYE 311
Query: 145 EVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
R+ + PN A ++ M+ +D+ AE+ F E D+ +
Sbjct: 312 RAKRVLDEMLGVGLCPNAA--TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++G +++ G L A E+ + G P+ + I + Y RN D+ A+ + ++ G
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAV 303
V T T + + K +D A E F E++++ V
Sbjct: 430 ------CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 465
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 119/287 (41%), Gaps = 12/287 (4%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
EL L + FN L+ + G A + M+ + PD+ TYN + A +
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
A ++ MKRDG +A T++ L S + G ++A + ++ + DL Y L
Sbjct: 261 EARALLARMKRDG-IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319
Query: 134 ITLYGQTGNLSEVYRI---WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
Q G + E +R+ L A P+ ++Y ++ + A + +E
Sbjct: 320 AVGLCQAGKVDEAFRLKDEMERLSTALPDV--VTYNTLVDACFKWRCSSDALRLLEEMRD 377
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
+ N+++ + KEG+LE A E+ G P+ T+ D Y + G++
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK 437
Query: 251 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
A +++ + G G K + T+ T + + + K + AE L
Sbjct: 438 AFTLMDEMV----GKGLKM--DTFTLNTVLYNLCKMKRYEDAEELLH 478
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 20/308 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A ALL +MK + + +N+L++ +A+ G ++ +++ M A PD TYN
Sbjct: 258 MLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYN 317
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V L + A R+ +EM+R D T++ L + A R L+E+ +
Sbjct: 318 VLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD 377
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN--ISYLNMIQVLVNLKDL 178
+ L + ++ + G L E + + ++A A I+Y +I ++
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEA--LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNV 435
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A E D N ++ K R E+AEEL +RG P+ ++
Sbjct: 436 AKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTV 495
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
Y + + + A+ ++ I+ K +PS T T ++ + +E
Sbjct: 496 MAAYFKEYNPEPALRLWDQMIER------KLIPSISTYNTLIKGLCR----------MER 539
Query: 299 LKKAVDDL 306
LK+A+D L
Sbjct: 540 LKEAIDKL 547
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 126/313 (40%), Gaps = 18/313 (5%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LLE+M++ + + + N ++ K G E+ ++++ + PD TYN + A
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+++ A +++EM G + D T + + + +E AE L R D
Sbjct: 431 KAGNVAKAFTLMDEMVGKG-LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDE 489
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
+Y ++ Y + N R+W + R P+ + +Y +I+ L ++ L A
Sbjct: 490 VSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS--TYNTLIKGLCRMERLKEAIDKL 547
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
E D N++I AY KEG LENA + P+ T + +
Sbjct: 548 NELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 305
G + A+ E ++ G+ T T ++ + DVD A F DD
Sbjct: 608 GKLDKALKLFESWVEKGKKV------DVITYNTLIQSMCKVGDVDTALHFF-------DD 654
Query: 306 LGVEVFEPLIRTY 318
+ V+ +P TY
Sbjct: 655 MEVKGLQPDAFTY 667
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 1/225 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LL + + + ++M Y K +PE + +M ++P TYN
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L + + A + E+ G V D TT++ + Y + G E A R ++ +
Sbjct: 531 IKGLCRMERLKEAIDKLNELVEKGLV-PDETTYNIIIHAYCKEGDLENAFRFHNKMVENS 589
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ L+ G L + +++ S I+Y +IQ + + D+ A
Sbjct: 590 FKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTAL 649
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
F + E D NV++ A ++ GR E A + + G
Sbjct: 650 HFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 111/295 (37%), Gaps = 34/295 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A LEK+ E L + +N+L+ Y K G+ K ++ EM + D++T N
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE------------------ 104
+ L + AE ++ + G V + + + +A+ + E
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520
Query: 105 -----------AGL-----FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
GL ++A L EL + D + Y +I Y + G+L +R
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ ++ ++ L L A K F+ W D+ N +I +
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
K G ++ A + +G P+A T+ + G + A + L K D+G+
Sbjct: 641 KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGK 695
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 115/261 (44%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
KA LL KM E L S + +NSL+ + K GH + ++ +K + ++PD +TY+V
Sbjct: 440 VHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSV 499
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ L + A + +K G + A+ ++ L + +AG ++A L+ + +
Sbjct: 500 FIDTLCKSKRMEEACDLFNSLKEKG-IKANEVMYTALIDGHCKAGKIDEAISLLERMHSE 558
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + S Y LI + G + E + ++ +Y +I+ ++ D A
Sbjct: 559 DCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHA 618
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F + S D+ I Y G ++ AE + R G P++ T+ +
Sbjct: 619 NRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISA 678
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y R G A + L++ +D G
Sbjct: 679 YERLGLAYDAFNVLKRMLDAG 699
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 117/294 (39%), Gaps = 7/294 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+++ +L +M E L S + +N+L+ Y + G E I+ M++++ P+ TYN
Sbjct: 371 DESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNEL 430
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A ++ +M + ++ T+++L + +AG F+ A + L L+
Sbjct: 431 ICGFSKRKHVHKAMTLLSKM-LESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG 489
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y I ++ + E ++ SL+ + Y +I + A
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAI 549
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ S + N +I KEG+++ + E + G P T+ I +
Sbjct: 550 SLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEM 609
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
LR GD A + + G P T F+ + +V AEG +
Sbjct: 610 LREGDFDHANRVFNQMVSFGHK------PDVYTYTAFIHTYCTSGNVKEAEGMM 657
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 133/326 (40%), Gaps = 20/326 (6%)
Query: 8 LLEKMKELN-------LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
LL+ ++++N S +N L+ + A+ +++ + EM I+P+ YT N
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLN 218
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + + +I A + ++ + G ++ D T+++L Y A + + N
Sbjct: 219 TMVNAYSKMGNIVEANLYVSKIFQAG-LSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPN 277
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLV-NLKD 177
+ R+ +Y +I + G + E +++ +R +P +Y +I L N ++
Sbjct: 278 KGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVR--TYTVIIHALFGNDRN 335
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
L G + F E ++ VM+ A KE +L+ + + +G P+ T+
Sbjct: 336 LEGMD-LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNA 394
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y G ++ A++ L G + P+ T + F + K V A L
Sbjct: 395 LIRGYCEEGRIEAALEIL------GLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLS 448
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ ++ + + LI AG
Sbjct: 449 KMLESKLTPSLVTYNSLIHVQCKAGH 474
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 116/281 (41%), Gaps = 13/281 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
N+++ Y+K G+ + + ++ + + PDS+TY + ND++ A +V M
Sbjct: 217 LNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMP 276
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI-TLYGQTGN 142
G + +++ + EAG ++ K++ + + + Y +I L+G N
Sbjct: 277 NKG-CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRN 335
Query: 143 LS--EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
L +++ R R PN +Y M+ + + L + + E +
Sbjct: 336 LEGMDLFNEMRE-RSCEPNVH--TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTY 392
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N +I Y +EGR+E A E+ PN +T+ + + + A+ L K ++
Sbjct: 393 NALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLE 452
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ K PS T + + + D A L++LK+
Sbjct: 453 S------KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKE 487
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 134/324 (41%), Gaps = 9/324 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A AL++ M L + +NS++ ++G +K + +EM + PD ++ +
Sbjct: 208 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V +I A ++ +EM+ G + D +FS L ++ G + A L+E+
Sbjct: 268 IGGFCRVGEIEEALKIYKEMRHRG-IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y +I + + G +S+ R+ + ++Y ++ L + L AE
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
E D+ +I Y EG+L+ A +L + + P+ T+ D
Sbjct: 387 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 446
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKK 301
R GD+ A D + + P+ T + ++ V+ A GFL E++ K
Sbjct: 447 CRQGDLDKANDLWDDM------HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 500
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTS 325
+ + + +I+ Y +G S
Sbjct: 501 GILP-NIMTYNSIIKGYCRSGNVS 523
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 9/291 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K +A++ +M++ + + N ++ + G E A++ M + + P TYN
Sbjct: 173 DKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSV 232
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L A V +EM G VA D +F+ L + G E+A + KE+ +R
Sbjct: 233 LKGLCRSGMWDKAWEVFKEMDDFG-VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL ++ LI L+ + G + R +R + Y +I + A
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351
Query: 183 KCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E GC D+ N ++ KE RL +AE L R RG P+ T+
Sbjct: 352 RVRDEM-VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHG 410
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
Y G + A+ + ++ + P T T + ++ D+D A
Sbjct: 411 YCIEGKLDKALQLFDTMLNQ------RLRPDIVTYNTLIDGMCRQGDLDKA 455
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 135/320 (42%), Gaps = 7/320 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + ++M+ + + F+ L+ L+A+ G + A ++EM+ ++PD Y +
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +S A RV +EM G D T++ L + + AE L E+ R
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCG-CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL + LI Y G L + +++ ++ ++Y +I + DL A
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + S + +++I ++ ++G++E+A + +G PN T+ Y
Sbjct: 457 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 516
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R+G++ L+K + K P T T + + +E + A L +++K
Sbjct: 517 CRSGNVSKGQKFLQKMMVN------KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 570
Query: 303 VDDLGVEVFEPLIRTYAAAG 322
V + LI ++ G
Sbjct: 571 KVQPDVVTYNMLINGFSVHG 590
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE LL +M+E + F +L+ Y G +K + M + PD TYN +
Sbjct: 385 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 444
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ D+ A + ++M + + T+S L + E G E A L E+ N+
Sbjct: 445 GMCRQGDLDKANDLWDDM-HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 503
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y +I Y ++GN+S+ + + + + + I+Y +I + + A K
Sbjct: 504 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 563
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E D+ N++I ++ G ++ A + E+ +G +P+ T+ + ++
Sbjct: 564 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 623
Query: 245 NGDMKLAVDCLEKAIDTG 262
G+ K A ++ + G
Sbjct: 624 AGNSKEAFQLHDEMLQRG 641
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 139/351 (39%), Gaps = 13/351 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + ++M + + F L+ + + G E+ I +EM+ I PD +++
Sbjct: 241 MWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFS 300
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A + EM+ G V D ++ + + AGL A R E+
Sbjct: 301 CLIGLFARRGKMDHAMAYLREMRCFGLV-PDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 359
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y L+ + L + + +R ++ +I L
Sbjct: 360 CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 419
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F + DI N +I ++G L+ A +L + R PN T+ I D
Sbjct: 420 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 479
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE--I 298
+ G ++ A L++ I+ G +P+ T + ++ + + +V + FL+ +
Sbjct: 480 SHCEKGQVEDAFGFLDEMINKG------ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 533
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
+ K DL + LI Y + +L ++ EKV+ + +L
Sbjct: 534 VNKVSPDL--ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 582
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 69/159 (43%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T + + Y +A F+K + + E+E R D+ + ++ + G+ + S+
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
++Y ++++ L A + FKE + D+R ++IG + + G +
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
E A ++ + R RG P+ ++ + R G M A+
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 316
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A L++M + + M +NS++ Y ++G+ K +Q+M + + PD TYN
Sbjct: 487 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 546
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + A +++ M+++ +V D T++ L + + G ++A +++ +
Sbjct: 547 LIHGYIKEDKMHDAFKLLNMMEKE-KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D Y +I + GN E +++
Sbjct: 606 GIEPDRYTYMSMINGHVTAGNSKEAFQL 633
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 137/358 (38%), Gaps = 42/358 (11%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAEA L +M + + +N+L+ Y+ TG ++ + +EM+ SI+PD T N+ M
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335
Query: 64 RALAAVNDISGAERVIEEMKRDGR----------------------------------VA 89
+L I A V + M G+ +A
Sbjct: 336 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIA 395
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D TFS L Y G+ +KA E+ + D+ Y +I + G + +
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
+ + +Y +IQ L A++ E + DI + +I K
Sbjct: 456 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCK 515
Query: 210 EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKW 269
GR+ +A+ + + G P+A + + D Y G M+ A+ + + G
Sbjct: 516 LGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------I 569
Query: 270 VPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSP 326
P+ T + + + +D G F E+L+K + + ++ +I AGRT P
Sbjct: 570 EPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI-LYNIIIDGLFVAGRTVP 626
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 130/329 (39%), Gaps = 23/329 (6%)
Query: 4 KAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A+ LL M E S + + +++ + K G K + +EM I PD TY+
Sbjct: 204 QADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 263
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + AE + +M G + +W T++NL Y G +++A R KE+
Sbjct: 264 VVHALCKARAMGKAEAFLRQMVNKGVLPDNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRH 322
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------VLVNL 175
+ D+ L+ + G + E ++ ++ + N SY M+ LV++
Sbjct: 323 SILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDM 382
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
DL F DI +V+I AYA G L+ A + R G P+ T+
Sbjct: 383 TDL------FDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 436
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EG 294
R G M A++ + ID G P ++ F + A E
Sbjct: 437 TTVIAALCRIGKMDDAMEKFNQMIDQG------VAPDKYAYHCLIQGFCTHGSLLKAKEL 490
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
LEI+ + L + F +I GR
Sbjct: 491 ILEIMNNGM-RLDIVFFSSIINNLCKLGR 518
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 118/284 (41%), Gaps = 18/284 (6%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA-DWTTFS 96
E + ++ +PD ++Y++ +++L A+ ++ M G V + D ++
Sbjct: 168 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYT 227
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--R 154
+ + + G KA KE+ R DL Y ++ + + + R + +
Sbjct: 228 TVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNK 287
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 214
P+ N +Y N+I + A + FKE D+ N+++G+ K G+++
Sbjct: 288 GVLPD--NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIK 345
Query: 215 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 274
A ++ + +G +P+ +++I + Y G + VD + D GDG P
Sbjct: 346 EARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCL---VD-MTDLFDLMLGDG--IAPDIY 399
Query: 275 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
T ++ + +D A I+ + D GV +P + TY
Sbjct: 400 TFSVLIKAYANCGMLDKA----MIIFNEMRDHGV---KPDVVTY 436
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/240 (16%), Positives = 86/240 (35%), Gaps = 36/240 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + +M++ + + + +++ + G + +M + PD Y Y+
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 472
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A+ +I E+ +G + D FS++ + + G A+ N
Sbjct: 473 CLIQGFCTHGSLLKAKELILEIMNNG-MRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN 531
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H D Y L+ Y G + + R++ ++ A G
Sbjct: 532 VGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA-----------------------G 568
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E ++ V ++ Y K GR++ L ++G P+ + I D
Sbjct: 569 IEP------------NVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIID 616
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA + + M + + + + +L+ Y K G ++ ++ +EM I P + YN+
Sbjct: 555 EKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 614
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ EM G +A + T++ + + + F++A KEL N
Sbjct: 615 IDGLFVAGRTVPAKVKFHEMTESG-IAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMN 673
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D+ +I QT + E ++ S+
Sbjct: 674 VKIDIITLNTMIAGMFQTRRVEEAKDLFASI 704
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 13/240 (5%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASS---IMPDSYTYNVWMRALAAVNDISGAERV 78
+ +N+L+ Y++ G I Q+M + S + PD+ T++ + A + V DIS R
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQG-RE 184
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
IE A+D + L ++Y + G E A + L+NR D+ A+ +I+ Y
Sbjct: 185 IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR----DVIAWNTMISGYA 240
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+ G ++ +++ + P ++++ ++ NL+DL ++ + D+
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 199 VTNVMIGAYAK-EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
+ NV++ Y K LE A ++ ER R R + TW I Y++ G K A+D ++
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTR----DVITWNILIVAYVQYGQAKDALDIFKQ 356
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 22/296 (7%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ FN+L+ Y + ++ EM + ++ D+ TYN + V D++ A +++E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 82 MKRDGRVAADWTTFSNLASIYVEAG-------LFEKAERALKELENRNAHR----DLSAY 130
M G + D T L + G +F+ +++ K+L+ + D+ Y
Sbjct: 456 MISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 131 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI+ G E ++ + R P+T I+Y +MI L L A + F
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
S + ++ +I Y K GR+++ EL RRG NA T+ + + G++
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
A+D ++ I +G P + TIR + ++++ A LE L+ ++D
Sbjct: 633 NGALDIFQEMISSG------VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMD 682
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 126/322 (39%), Gaps = 47/322 (14%)
Query: 2 TEKAEALLEKMKELNLGFSSMP-FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
T A LL KM+E++ ++ +++++ K G + EM+ I PD +TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + S AE++++EM + +++ D T++ L + +V+ G F +AE E+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R PNT I+Y +MI L
Sbjct: 354 RG---------------------------------IIPNT--ITYSSMIDGFCKQNRLDA 378
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE F + + ++ N +I Y R+++ EL G + T+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ GD+ A+D L++ I +G P T T + + A ++++
Sbjct: 439 GFYLVGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 301 KAVDDLGVEV----FEPLIRTY 318
K+ DL EP ++TY
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTY 514
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 123/330 (37%), Gaps = 18/330 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ L +M+E + +NS++ + +G ++QEM I PD TYN +
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A AE + +EM G + + T+S++ + + + AE + +
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+L + LI Y + + + + +Y +I + DL A
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-----------RGADPNAK 233
+E S DI + ++ G+L++A E+ + ++ G +P+ +
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ I + G A + E+ G VP + T + + ++ +D A
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ + V F LI Y AGR
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 134/302 (44%), Gaps = 10/302 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L +KM E+ L +++ +N+L+ Y G E+ + EM IMP TYN+
Sbjct: 336 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 395
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + A+ +I+EM++ G + D T++ L + Y G +KA E+ ++
Sbjct: 396 VHALFMEGRMGEADDMIKEMRKKG-IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
Y LI + + + E ++ + + I + M+ ++ A
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 514
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE + D N ++ +EG++E A L + +RRG P+ ++ Y
Sbjct: 515 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 574
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R GD+K A ++ + G + P+ T ++ + ++ D AE E+LK+
Sbjct: 575 GRRGDIKDAFRVRDEMLSIG------FNPTLLTYNALIKCLCKNQEGDLAE---ELLKEM 625
Query: 303 VD 304
V+
Sbjct: 626 VN 627
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 5/262 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L +M L + + FN ++ + K G +K I M+ P+ +YN
Sbjct: 231 EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTI 290
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ +I GA R+++ M+ G + D T+ +L S + G E+A ++
Sbjct: 291 IHGYSSRGNIEGARRILDAMRVKG-IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 349
Query: 123 AHRDLSAYQFLITLYGQTGNLSEV--YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y LI Y G+L YR + P+ + +Y ++ L +
Sbjct: 350 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS--TYNLLVHALFMEGRMGE 407
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ KE D N++I Y++ G + A +L +G +P T+
Sbjct: 408 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIY 467
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
R MK A D EK +D G
Sbjct: 468 VLSRRNRMKEADDLFEKILDQG 489
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A LL++M ++ + FN+LM + G E+ ++ EMK I PD +YN
Sbjct: 510 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNT 569
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ DI A RV +EM G T++ L + + AE LKE+ N+
Sbjct: 570 LISGYGRRGDIKDAFRVRDEMLSIG-FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 628
Query: 122 NAHRDLSAYQFLITLYGQTGNLSE 145
D S Y LI G L E
Sbjct: 629 GISPDDSTYLSLIEGMGNVDTLVE 652
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 135/331 (40%), Gaps = 10/331 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NSL++ K G ++ ++ +M P++ TYN + L N + A ++ +
Sbjct: 339 YNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLT 398
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D T+++L + A KE++ + H D Y LI G L
Sbjct: 399 GKG-ILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKL 457
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + + + ++ I+Y +I K + AE+ F + E + + N +
Sbjct: 458 QEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTL 517
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I K R+E A +L ++ G P+ T+ Y+ + GD+K A D + T
Sbjct: 518 IDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAAD----IVQTMA 573
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
DG + P T T + + V+ A L ++ +L + P+I+ R
Sbjct: 574 SDGCE--PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKR 631
Query: 324 TS-PVMLRRLKMEKVEVSEAS--KKLLEAIC 351
+ V L R +EK E +A K + +C
Sbjct: 632 SKEAVRLFREMIEKAEAPDAVTYKIVFRGLC 662
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE + ++M+ + +S+ +N+L+ K+ E+ ++ +M + PD +TYN +
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
DI A +++ M DG D T+ L + +AG E A + L+ ++ +
Sbjct: 554 TYFCKAGDIKKAADIVQTMASDG-CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGI 612
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ AY +I + E R++R +
Sbjct: 613 NLTPHAYNPVIQALFRRKRSKEAVRLFREM 642
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 13 KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 72
K+ N SS F ++ K G + + I++EMK S + D+ + V++ + A+
Sbjct: 81 KQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLY 140
Query: 73 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
+ + ++ M+ + V A+ ++ L ++ V+ + E A + +R D+S +
Sbjct: 141 NEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNI 200
Query: 133 LITLYGQTGNLSEVYRIWRSLRLA--------FPNTANISYLNMIQVLVNLKDLPGAEKC 184
LI L ++I ++ L P+ ++ ++Q + +L GA +
Sbjct: 201 LIK------ALCRAHQIRPAILLMEEMEDFGLLPDEK--TFTTIMQGFIEEGNLDGAMRV 252
Query: 185 FKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEE-LKERARRRGADPNAKTWEIFSDYY 242
++ E+GC ++ V ++ G + KEGR+E A ++E + R G P+ T+ + +
Sbjct: 253 KEQMVEAGCVVTNVTVNVLVNG-FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGL 311
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G +K A++ ++ + G
Sbjct: 312 SKTGHVKHALEVMDMMLREG 331
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 47/249 (18%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 106
M + I PD T+N+ ++AL + I A ++EEM+ G + D TF+ + ++E G
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFG-LLPDEKTFTTIMQGFIEEG 244
Query: 107 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA---FPNTANI 163
+ A R +++ L+ + + G + E R + L FP
Sbjct: 245 NLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFP----- 299
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
D N+++ +K G +++A E+ +
Sbjct: 300 --------------------------------DKYTFNMLVNGLSKTGHVKHALEVMDMM 327
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
R G DP+ T+ + G++ AV L + I+ P++ T T +
Sbjct: 328 LREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER------DCSPNTVTYNTIISTL 381
Query: 284 EQEKDVDGA 292
+E V+ A
Sbjct: 382 CKENQVEEA 390
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L+++M L +NSL+T + K G +K I+Q M + PD TY
Sbjct: 528 EEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTL 587
Query: 63 MRALAAVNDISGAERVIEEMKRDG 86
+ L + A +++ ++ G
Sbjct: 588 IAGLCKAGRVEAATKLLRTIQMKG 611
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 4/252 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L+E+M++ L F ++M + + G+ + + ++M + + + T NV +
Sbjct: 217 LMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFC 276
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
I A R IEEM D TF+ L + + G + A + + D+
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI 336
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
Y LI+ + G + E ++ + R PNT ++Y +I L + A K
Sbjct: 337 YTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNT--VTYNTIISTLCKENQVEEATKLA 394
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
D+ N +I A EL + + +G P+ T+ + D
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454
Query: 246 GDMKLAVDCLEK 257
G ++ A++ L++
Sbjct: 455 GKLQEALNLLKE 466
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 148/360 (41%), Gaps = 20/360 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A + + M E + ++ + SL+ +A + ++ +++EM+ PD YN
Sbjct: 203 LVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYN 262
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A ++ GA V ++M+R G A D T+S L IY G FE+ +++
Sbjct: 263 SLIEAYADAGNVHGAAGVFKQMQRGG-CAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKE 321
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ ++ Y LI ++G+ G E ++ + + + +Y ++ V
Sbjct: 322 LSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTRE 381
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K + + +T + + +I +Y K ++A R R G DP ++
Sbjct: 382 AAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQ 441
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEIL 299
Y + G A L G P S ++ + M + + D A E F E+
Sbjct: 442 GYAKGGLYVEAGSTL-----YAMNKAGFQAPVS-SVNSVMEAYSKVGLHDEALEFFSELQ 495
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKK-------LLEAICV 352
+K ++ E L+ Y G +L K E V + E SK LL ++CV
Sbjct: 496 QKEGSEVDERTHETLLGVYCDMG-----LLEEAKEEFVIIKETSKVPGARVYCLLLSLCV 550
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 18/269 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ +L MKEL+ + +NSL+ ++ + G+ ++ + +M S + PD TY+
Sbjct: 310 EQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYS-- 367
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFS-----NLASIYVEAGLFEKAERALKE 117
AL +V G R E K + + +T S L S Y + +++ A +
Sbjct: 368 --ALLSVCGRGGLTR--EAAKIHQHMLTNESTPSLEASAGLISSYGKMAMYKDALVSYYR 423
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ---VLVN 174
+ +SAY LI Y + G E ++ A A +S +N + V
Sbjct: 424 IREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKA-GFQAPVSSVNSVMEAYSKVG 482
Query: 175 LKDLPGAEKCFKEWESGCAT-YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
L D A + F E + + D R ++G Y G LE A+E + P A+
Sbjct: 483 LHD--EALEFFSELQQKEGSEVDERTHETLLGVYCDMGLLEEAKEEFVIIKETSKVPGAR 540
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ + +R A L++ I G
Sbjct: 541 VYCLLLSLCVRRSKWDYATQLLDEMIAAG 569
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 1/236 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LL M+ +G + + FN+++ Y + G EK I M+ I D YTYN
Sbjct: 305 EAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTL 364
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L VN + A++++ M G VA ++ +++ L SI+ + G +A R +++E +
Sbjct: 365 ACGLCRVNRMEDAKKLLHIMAEKG-VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKG 423
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + Y +I Y + G++ E R + + +Y ++ + A
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVAL 483
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ F+E + ++ ++ AKEGR E A +L + G P+ + +
Sbjct: 484 RLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVL 539
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A LL+++ +G ++ +NSL+ Y + + + + +++EM+ + P TY +
Sbjct: 164 VDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTI 223
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L+ DIS E V +EMKR VA D +S + + Y G +A E
Sbjct: 224 LVDGLSRAGDISKVEAVYDEMKRK-NVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGH 282
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y LI + + G + + ++L I + MI + A
Sbjct: 283 GVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKA 342
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E DI N + + R+E+A++L +G PN ++
Sbjct: 343 LEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISI 402
Query: 242 YLRNGDM 248
+ + GDM
Sbjct: 403 HAKEGDM 409
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 22/296 (7%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ FN+L+ Y + ++ EM + ++ D+ TYN + V D++ A +++E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 82 MKRDGRVAADWTTFSNLASIYVEAG-------LFEKAERALKELENRNAHR----DLSAY 130
M G + D T L + G +F+ +++ K+L+ + D+ Y
Sbjct: 456 MISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 131 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI+ G E ++ + R P+T I+Y +MI L L A + F
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
S + ++ +I Y K GR+++ EL RRG NA T+ + + G++
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
A+D ++ I +G P + TIR + ++++ A LE L+ ++D
Sbjct: 633 NGALDIFQEMISSG------VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMD 682
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 47/322 (14%)
Query: 2 TEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
T A LL KM+E+ ++ + + +++++ K G + EM+ I PD +TYN
Sbjct: 235 TVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + S AE++++EM + +++ D T++ L + +V+ G F +AE E+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R PNT I+Y +MI L
Sbjct: 354 RG---------------------------------IIPNT--ITYSSMIDGFCKQNRLDA 378
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE F + + ++ N +I Y R+++ EL G + T+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ GD+ A+D L++ I +G P T T + + A ++++
Sbjct: 439 GFYLVGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 301 KAVDDLGVEV----FEPLIRTY 318
K+ DL EP ++TY
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTY 514
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 123/330 (37%), Gaps = 18/330 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ L +M+E + +NS++ + +G ++QEM I PD TYN +
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A AE + +EM G + + T+S++ + + + AE + +
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+L + LI Y + + + + +Y +I + DL A
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-----------RGADPNAK 233
+E S DI + ++ G+L++A E+ + ++ G +P+ +
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ I + G A + E+ G VP + T + + ++ +D A
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ + V F LI Y AGR
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 9/264 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A + L +M ++ L S P+NSL+ + K G +++ EM + P TY
Sbjct: 419 DTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSL 478
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M + I+ A R+ EM G V + +T F+ L S AGL A + E+ N
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIVPSIYT-FTTLLSGLFRAGLIRDAVKLFTEMAEWN 537
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y +I Y + GN+S+ + + + P+T SY +I L L
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDT--YSYRPLIHGLC-LTGQAS 594
Query: 181 AEKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K F + + C +I T ++ G + +EG+LE A + + RG D + + +
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHG-FCREGKLEEALSVCQDMGLRGVDLDLVCYGVL 653
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTG 262
D L++ D K+ + L++ D G
Sbjct: 654 IDGSLKHKDRKVFLGLLKEMHDRG 677
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 126/310 (40%), Gaps = 20/310 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ A L +M E N+ + + +N ++ Y + G+ K + EM I+PD+Y+Y
Sbjct: 522 LIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYR 581
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L S A+ ++ + + G + ++ L + G E+A +++
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHK-GNCELNEICYTGLLHGFCREGKLEEALSVCQDMGL 640
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R DL Y LI + + + + + ++ Y +MI D
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 181 AEKCFKEWE----SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A F W+ GC ++ T V I K G + AE L + R + PN T+
Sbjct: 701 A---FGIWDLMINEGCVPNEVTYTAV-INGLCKAGFVNEAEILCSKMRPGNSVPNQVTYG 756
Query: 237 IFSDYYLRN-GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
F D + GDMK AV+ L AI G + ++ T +R F ++ ++ A
Sbjct: 757 CFLDILTKGVGDMKKAVE-LHNAILKG------LLANTATYNMLIRGFCRQGRMEEAS-- 807
Query: 296 LEILKKAVDD 305
E++ + + D
Sbjct: 808 -ELITRMIGD 816
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 13/289 (4%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
+ +M I PD Y Y +R+L + D+S A+ +I +M+ G + ++ L
Sbjct: 214 LFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATG-CDVNIVPYNVLIDGL 272
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS-EVYRIWRSLRLAF-PNT 160
+ +A K+L + D+ Y L+ + + I LRL F P+
Sbjct: 273 CKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSE 332
Query: 161 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 220
A +S ++++ L + A K + +I V N +I + K + AE L
Sbjct: 333 AAVS--SLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLF 390
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
+R + G PN T+ I D + R G + A+ L + ID G PS + +
Sbjct: 391 DRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG------LKPSVYPYNSLI 444
Query: 281 RHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 328
+ D+ AE + E++ K ++ V + L+ Y + G+ + +
Sbjct: 445 NGHCKFGDISAAESLMAEMINKKLEPT-VVTYTSLMGGYCSKGKINKAL 492
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 91/234 (38%), Gaps = 9/234 (3%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
LL++M + L + + S++ +KTG ++ I M +P+ TY + L
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA-GLFEKAERALKELEN---RN 122
++ AE + +M R G + T+ I + G +KA EL N +
Sbjct: 728 CKAGFVNEAEILCSKM-RPGNSVPNQVTYGCFLDILTKGVGDMKKA----VELHNAILKG 782
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + Y LI + + G + E + + + I+Y MI L D+ A
Sbjct: 783 LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAI 842
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ + D N +I G + A EL+ R+G PN +T E
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSE 896
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 101/238 (42%), Gaps = 9/238 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A L++++ E + + +N+L+ K + ++ + M + P+ TY++
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSI 407
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A + EM G + + +++L + + + G AE + E+ N+
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVY-PYNSLINGHCKFGDISAAESLMAEMINK 466
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y L+ Y G +++ R++ + + ++ ++ L + A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDA 526
Query: 182 EKCFKEWESGCATYDI---RVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
K F E A +++ RVT NVMI Y +EG + A E +G P+ ++
Sbjct: 527 VKLFTEM----AEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSY 580
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 106/279 (37%), Gaps = 11/279 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ ++ +M+ + +P+N L+ K + I +++ + PD TY +
Sbjct: 245 RAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLV 304
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L V + +I+EM R R + S+L + G E+A +K +
Sbjct: 305 CGLCKVQEFEVGLEMIDEMLRL-RFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGV 363
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPGA 181
++ Y LI + N E ++ R ++ PN +++Y +I + L A
Sbjct: 364 SPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN--DVTYSILIDMFCRRGKLDTA 421
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E + N +I + K G + AE L + +P T+
Sbjct: 422 LSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGG 481
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
Y G + A+ + TG+G VPS T T +
Sbjct: 482 YCSKGKINKALRLYHEM--TGKG----IVPSIYTFTTLL 514
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 119/259 (45%), Gaps = 11/259 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE +LE + L ++ +N+L+ Y + + +I ++MK+ I PD TYN +
Sbjct: 353 KAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALI 412
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + I+ AE ++ EM++ G V TF+ L Y AG EK L +++++
Sbjct: 413 NGLCKMEMITEAEDLVMEMEKSG-VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ ++ ++ + + G + E I + + PN Y ++I + + G
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQ--VYNSIIDAYI---ESGGT 526
Query: 182 EKCF---KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
E+ F ++ +S + I N+++ K +++ AEEL +G P+ ++
Sbjct: 527 EQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTI 586
Query: 239 SDYYLRNGDMKLAVDCLEK 257
GD A++ L++
Sbjct: 587 ISACCNKGDTDRALELLQE 605
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 1/236 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L++ + G ++ A++ EM + S++PD +TY++ L D + E
Sbjct: 268 YNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESL 327
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G + +T S L + + G KAE+ L+ L + + Y LI Y Q +L
Sbjct: 328 KKGVIIGAYTC-SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDL 386
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ I+ ++ +I+Y +I L ++ + AE E E + N +
Sbjct: 387 QGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTL 446
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
I AY + G+LE + + +G N ++ + +NG + AV L+ I
Sbjct: 447 IDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMI 502
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/356 (16%), Positives = 131/356 (36%), Gaps = 40/356 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++ AL+++M ++ ++ L +TG + ++ E ++ +YT ++
Sbjct: 282 DETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSIL 341
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAA-------------------------------- 90
+ L ++ AE+V+E + G V
Sbjct: 342 LNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHI 401
Query: 91 --DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
D T++ L + + + +AE + E+E + + LI YG+ G L + +
Sbjct: 402 RPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFT 461
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ ++ + IS+ ++++ +P A + + +V N +I AY
Sbjct: 462 VLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYI 521
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
+ G E A L E+ + G + T+ + +N + A + + + G
Sbjct: 522 ESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQG------ 575
Query: 269 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
P + T + + D D A L+ + K + + PL+ +AGR
Sbjct: 576 LRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRV 631
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 101/270 (37%), Gaps = 7/270 (2%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD+++YNV + L S A +V +EM G VA + T++ + +V+ G E R
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRG-VAPNQITYNTMIDGHVKGGDLEAGFR 251
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
++ ++ Y L++ + G + E + + +Y + L
Sbjct: 252 LRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLT 311
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
D F E ++++ K+G++ AE++ E G P
Sbjct: 312 RTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTA 371
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
+ + Y + D++ A E+ P T + + + + AE
Sbjct: 372 IYNTLINGYCQVRDLQGAFSIFEQM------KSRHIRPDHITYNALINGLCKMEMITEAE 425
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ ++K+ D VE F LI Y AG+
Sbjct: 426 DLVMEMEKSGVDPSVETFNTLIDAYGRAGQ 455
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+A L+EKMK + S +N L+ K ++ +I + + PD +YN
Sbjct: 526 TEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNT 585
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A D A +++EM + + T+ L S AG E + + ++
Sbjct: 586 IISACCNKGDTDRALELLQEMHK-YDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHK 644
Query: 122 NAHRDLSAY 130
N S Y
Sbjct: 645 NVEPSSSIY 653
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 22/296 (7%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ FN+L+ Y + ++ EM + ++ D+ TYN + V D++ A +++E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 82 MKRDGRVAADWTTFSNLASIYVEAG-------LFEKAERALKELENRNAHR----DLSAY 130
M G + D T L + G +F+ +++ K+L+ + D+ Y
Sbjct: 456 MISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 131 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI+ G E ++ + R P+T I+Y +MI L L A + F
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
S + ++ +I Y K GR+++ EL RRG NA T+ + + G++
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
A+D ++ I +G P + TIR + ++++ A LE L+ ++D
Sbjct: 633 NGALDIFQEMISSG------VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMD 682
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 126/322 (39%), Gaps = 47/322 (14%)
Query: 2 TEKAEALLEKMKELNLGFSSMP-FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
T A LL KM+E++ ++ +++++ K G + EM+ I PD +TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + S AE++++EM + +++ D T++ L + +V+ G F +AE E+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R PNT I+Y +MI L
Sbjct: 354 RG---------------------------------IIPNT--ITYSSMIDGFCKQNRLDA 378
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE F + + ++ N +I Y R+++ EL G + T+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ GD+ A+D L++ I +G P T T + + A ++++
Sbjct: 439 GFYLVGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 301 KAVDDLGVEV----FEPLIRTY 318
K+ DL EP ++TY
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTY 514
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 123/330 (37%), Gaps = 18/330 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ L +M+E + +NS++ + +G ++QEM I PD TYN +
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A AE + +EM G + + T+S++ + + + AE + +
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+L + LI Y + + + + +Y +I + DL A
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-----------RGADPNAK 233
+E S DI + ++ G+L++A E+ + ++ G +P+ +
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ I + G A + E+ G VP + T + + ++ +D A
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ + V F LI Y AGR
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 22/296 (7%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ FN+L+ Y + ++ EM + ++ D+ TYN + V D++ A +++E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 82 MKRDGRVAADWTTFSNLASIYVEAG-------LFEKAERALKELENRNAHR----DLSAY 130
M G + D T L + G +F+ +++ K+L+ + D+ Y
Sbjct: 456 MISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 131 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI+ G E ++ + R P+T I+Y +MI L L A + F
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
S + ++ +I Y K GR+++ EL RRG NA T+ + + G++
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
A+D ++ I +G P + TIR + ++++ A LE L+ ++D
Sbjct: 633 NGALDIFQEMISSG------VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMD 682
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 47/322 (14%)
Query: 2 TEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
T A LL KM+E+ ++ + + +++++ K G + EM+ I PD +TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + S AE++++EM + +++ D T++ L + +V+ G F +AE E+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R PNT I+Y +MI L
Sbjct: 354 RG---------------------------------IIPNT--ITYSSMIDGFCKQNRLDA 378
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE F + + ++ N +I Y R+++ EL G + T+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ GD+ A+D L++ I +G P T T + + A ++++
Sbjct: 439 GFYLVGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 301 KAVDDLGVEV----FEPLIRTY 318
K+ DL EP ++TY
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTY 514
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 123/330 (37%), Gaps = 18/330 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ L +M+E + +NS++ + +G ++QEM I PD TYN +
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A AE + +EM G + + T+S++ + + + AE + +
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+L + LI Y + + + + +Y +I + DL A
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-----------RGADPNAK 233
+E S DI + ++ G+L++A E+ + ++ G +P+ +
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ I + G A + E+ G VP + T + + ++ +D A
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ + V F LI Y AGR
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 9/296 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y K G + ++ EM + PD TY++ + A A +++EM+
Sbjct: 307 YNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEME 366
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
DG V FS + + + + G ++KA L+E+ D Y +I +G+ L
Sbjct: 367 ADG-VKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCL 425
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNV 202
++ +R +++ +I A + FKE ES C N+
Sbjct: 426 GHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPP-GTTTYNI 484
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
MI ++ R E + + +G PN T+ D Y R+G K A+DC+E
Sbjct: 485 MINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAM---- 540
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
+ DG K PS + + Q D A ++ ++ + V LI +
Sbjct: 541 KADGLK--PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAF 594
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 12/230 (5%)
Query: 39 KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA---ERVIEEMKRDGRVAADWTTF 95
++ A+I+E + +PD +Y+ + +L D A ER++ ++ RD R+ D F
Sbjct: 181 RLLALIRE---HNFLPDLASYSHLLASLLNTRDPPDAAILERLLGDL-RDSRLEPDAPLF 236
Query: 96 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 155
S+L S + A L + A L + +A LI+ G G + E ++ L
Sbjct: 237 SDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFL 296
Query: 156 AF---PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
A P T +Y +++ V + L AE E D ++++ AY + GR
Sbjct: 297 AGEIKPRTR--AYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGR 354
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
E+A L + G P++ + + GD + A L + +G
Sbjct: 355 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASG 404
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 2/187 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L ++M+E N + +N ++ L + + ++ EMK ++P+ TY +
Sbjct: 466 LFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYG 525
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A IE MK DG + T + L + Y + GL + A +K +
Sbjct: 526 RSGRYKEAIDCIEAMKADG-LKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST 584
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
LI +G+ + E + + + ++ I+Y +++ L+ ++ ++E
Sbjct: 585 VVLNSLINAFGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEE 644
Query: 188 W-ESGCA 193
SGCA
Sbjct: 645 MITSGCA 651
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 9/256 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A L +MKE + S + +N ++ + ++G+ + ++ EM +PD+YTY
Sbjct: 347 MMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYR 406
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L +V +S A+ ++++ +D + +S L Y + G F+ A A + +
Sbjct: 407 PLISGLCSVGRVSEAKEFVDDLHKDHH-KLNNMCYSALVHGYCKEGRFKDAVSACRVMVE 465
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R DL Y LI + + ++ + + + + Y NMI +L
Sbjct: 466 RGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKE 525
Query: 181 AEKCFKEW----ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A F W + GC ++ +I K G ++ AE L + PN T+
Sbjct: 526 A---FGLWDIMVDEGCLP-NVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYG 581
Query: 237 IFSDYYLRNGDMKLAV 252
F D+ R G+M+ AV
Sbjct: 582 CFLDHLTRGGNMEKAV 597
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 108/262 (41%), Gaps = 5/262 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L+KM + ++ F+ P+NSL+ Y K G+ EM + P TY
Sbjct: 244 DNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSL 303
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A +V EM G ++ + TF+ + S A + +A R E++ R
Sbjct: 304 ISGYCNEGEWHKAFKVYNEMTAKG-ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
Y +I + ++GN+SE + + + + P+T +Y +I L ++ +
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDT--YTYRPLISGLCSVGRVSE 420
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A++ + + + ++ Y KEGR ++A RG + + I D
Sbjct: 421 AKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILID 480
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
R D + L++ + G
Sbjct: 481 GTAREHDTRALFGLLKEMHNHG 502
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 7/261 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ ++M + L + + + SL++ Y G K + EM A I P++YT+ +
Sbjct: 281 AKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIIS 340
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L N ++ A R+ EMK + ++ T++ + + +G +A L E+ +
Sbjct: 341 GLCRANMMAEAIRLFGEMK-ERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFV 399
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN---LKDLPGA 181
D Y+ LI+ G +SE L N+ Y ++ KD A
Sbjct: 400 PDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSA 459
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
C E G A D+ ++I A+E L + G P+A + D
Sbjct: 460 --CRVMVERGVAM-DLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDR 516
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ + G++K A + +D G
Sbjct: 517 HSKAGNLKEAFGLWDIMVDEG 537
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L ++M E L + + ++ L+ + + G + + +M +SI Y YN +
Sbjct: 210 EAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLI 269
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + S A+ +EM G + T+++L S Y G + KA + E+ +
Sbjct: 270 NGYCKLGNASAAKYYFDEMIDKG-LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGI 328
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + +I+ + ++E R++ ++ + ++Y MI+ ++ A
Sbjct: 329 SPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFH 388
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E D +I GR+ A+E + + N + Y
Sbjct: 389 LLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYC 448
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+ G K AV ++ G
Sbjct: 449 KEGRFKDAVSACRVMVERG 467
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 63/373 (16%), Positives = 125/373 (33%), Gaps = 68/373 (18%)
Query: 12 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
MK+ NL ++L+ + + + ++ ++++ PD Y Y+ +R+L + D
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNL--------------------------ASIYVEA 105
+ A+ +I M+ + + ++ L A++
Sbjct: 147 FNKAKEMIHWMEFN-QCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY 205
Query: 106 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 165
G F +AE KE+ + + Y LI + + G + + A Y
Sbjct: 206 GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPY 265
Query: 166 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
++I L + A+ F E T + +I Y EG A ++
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTA 325
Query: 226 RGADPNAK-----------------------------------TWEIFSDYYLRNGDMKL 250
+G PN T+ + + + R+G++
Sbjct: 326 KGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISE 385
Query: 251 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV 310
A L++ + G +VP + T R + V A+ F++ L K L
Sbjct: 386 AFHLLDEMVGKG------FVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMC 439
Query: 311 FEPLIRTYAAAGR 323
+ L+ Y GR
Sbjct: 440 YSALVHGYCKEGR 452
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 22/186 (11%)
Query: 147 YRIWRSLRLAFPN--TANIS-----YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
+R + + L F + +AN+ Y +++ L LKD A++ E I V
Sbjct: 109 FRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVV 168
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
NV+I K R+ A E+K ++G + N T YY + + +L L K +
Sbjct: 169 YNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVT------YYGKFNEAEL----LFKEM 218
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
+G + S I +F R E +D A GFL+ + KA + V + LI Y
Sbjct: 219 GE-KGLCANHITYSILIDSFCRRGE----MDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273
Query: 320 AAGRTS 325
G S
Sbjct: 274 KLGNAS 279
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 128/296 (43%), Gaps = 22/296 (7%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ FN+L+ Y + ++ EM + ++ D+ TYN + V D++ A +++E
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 82 MKRDGRVAADWTTFSNLASIYVEAG-------LFEKAERALKELENRNAHR----DLSAY 130
M G + D T L + G +F+ +++ K+L+ + D+ Y
Sbjct: 456 MISSG-LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTY 514
Query: 131 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI+ G E ++ + R P+T I+Y +MI L L A + F
Sbjct: 515 NILISGLINEGKFLEAEELYEEMPHRGIVPDT--ITYSSMIDGLCKQSRLDEATQMFDSM 572
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
S + ++ +I Y K GR+++ EL RRG NA T+ + + G++
Sbjct: 573 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNI 632
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
A+D ++ I +G P + TIR + ++++ A LE L+ ++D
Sbjct: 633 NGALDIFQEMISSG------VYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMD 682
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 47/322 (14%)
Query: 2 TEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
T A LL KM+E+ ++ + + +++++ K G + EM+ I PD +TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + S AE++++EM + +++ D T++ L + +V+ G F +AE E+
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R PNT I+Y +MI L
Sbjct: 354 RG---------------------------------IIPNT--ITYSSMIDGFCKQNRLDA 378
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE F + + ++ N +I Y R+++ EL G + T+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ GD+ A+D L++ I +G P T T + + A ++++
Sbjct: 439 GFYLVGDLNAALDLLQEMISSG------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 301 KAVDDLGVEV----FEPLIRTY 318
K+ DL EP ++TY
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTY 514
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 123/330 (37%), Gaps = 18/330 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ L +M+E + +NS++ + +G ++QEM I PD TYN +
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A AE + +EM G + + T+S++ + + + AE + +
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRG-IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+L + LI Y + + + + +Y +I + DL A
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-----------RGADPNAK 233
+E S DI + ++ G+L++A E+ + ++ G +P+ +
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ I + G A + E+ G VP + T + + ++ +D A
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG------IVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ + V F LI Y AGR
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 120/256 (46%), Gaps = 4/256 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNV 61
++A + KM+E ++ FN+L+ + G PE+ +++ M + +I PD TYN+
Sbjct: 155 KEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSREENIKPDDRTYNI 214
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++A N+I A V+ M G + D T++ +A Y +A + +++N
Sbjct: 215 LVQAWCNKNNIEKAWGVVHRMVGAG-LKPDVVTYNTIARAYARGKETSRAAELISQMQNN 273
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPG 180
++ ++ Y + GN+++ + ++ F N+ N +++ +++ D G
Sbjct: 274 KVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQ-GFGVHPNLFIFNSLLKGFLDITDTKG 332
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ + D+ + ++ A++ G +E EE+ + + G +P+ + I +
Sbjct: 333 VDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAK 392
Query: 241 YYLRNGDMKLAVDCLE 256
Y+R G+ K A LE
Sbjct: 393 GYVRAGEPKKAEALLE 408
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 18 GFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
GF P FNSL+ + + + + M+ + PD TY+ M A ++ +
Sbjct: 307 GFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLME 366
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
E + ++M + G + D FS LA YV AG +KAE L+ + AH ++ + +
Sbjct: 367 KCEEMFQDMIKSG-IEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTI 425
Query: 134 ITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQVLV 173
I+ + + + R++ R R+ PN LN + L+
Sbjct: 426 ISGWCSAAKMEDALRVYDRMCRMDVQPN------LNTFETLI 461
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 119/297 (40%), Gaps = 8/297 (2%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
LM + G P+++ +I + + P TY + AL ++++++++G
Sbjct: 74 LMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNG 133
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
+ D F+ + + + E+G ++A + +++ + S + LI +G G E
Sbjct: 134 -LRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEES 192
Query: 147 YRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++ + R + +Y ++Q N ++ A D+ N +
Sbjct: 193 SKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIAR 252
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AYA+ A EL + + PN +T I D Y + G+M A+ + K
Sbjct: 253 AYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKM------Q 306
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
G P+ + ++ F D G + L ++++ V + ++ +++AG
Sbjct: 307 GFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAG 363
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+ + L M+E + + ++++M ++ G EK + Q+M S I PD++ +++
Sbjct: 330 TKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSI 389
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + AE ++E M G + F+ + S + A E A R +
Sbjct: 390 LAKGYVRAGEPKKAEALLEAMATHG-AHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRM 448
Query: 122 NAHRDLSAYQFLITLYGQ 139
+ +L+ ++ LI YG+
Sbjct: 449 DVQPNLNTFETLIWGYGE 466
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/237 (17%), Positives = 87/237 (36%), Gaps = 36/237 (15%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +A L+ +M+ + + ++ Y+K G+ I +M+ + P+ + +N
Sbjct: 260 TSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNS 319
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ + D G + + M+ G V D T+S + + + AGL EK E +++
Sbjct: 320 LLKGFLDITDTKGVDETLTLMQEFG-VKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKS 378
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D A+ L Y + G + A
Sbjct: 379 GIEPDNHAFSILAKGYVRAGEPKK-----------------------------------A 403
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
E + + A ++ + +I + ++E+A + +R R PN T+E
Sbjct: 404 EALLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQPNLNTFETL 460
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EK E + + M + + + F+ L Y + G P+K A+++ M P+ +
Sbjct: 364 LMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFT 423
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A RV + M R V + TF L Y EA KAE L+ +E
Sbjct: 424 TIISGWCSAAKMEDALRVYDRMCRMD-VQPNLNTFETLIWGYGEANEPWKAEELLQIMEE 482
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
+ Q + + G ++E RI
Sbjct: 483 MGVLPRKNTVQLVADAWRAIGFINEAKRI 511
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F+SL+ + G + + EM +I PD+YT+N+ + AL I A+ VI M
Sbjct: 231 FSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMM 290
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
++G V T++ L Y KA+ L + + +Y +I + + +
Sbjct: 291 KEG-VEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMV 349
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E ++ + ++Y ++I L +P A + E + C DI N +
Sbjct: 350 DEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSL 409
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I + K ++ A L ++ + G PN T+ I D + G +K A D + + G
Sbjct: 410 IDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKG 468
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Query: 24 FNSLMTLYA---KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
+N+LM Y + G + + +II M+ + P+S +YN+ + + + A +
Sbjct: 301 YNTLMDGYCLVNEVGKAKHVLSIISRMRVA---PNSRSYNIMINGFCKIKMVDEALCLFH 357
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
EM G +A T+++L +AG A + E+ N D+ Y LI ++ +
Sbjct: 358 EMCCRG-IAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKN 416
Query: 141 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
++ + + + ++ +Y +I L L A+ F++ +
Sbjct: 417 QHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTY 476
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
N+MI KEG + AE L + G P+A T+E
Sbjct: 477 NIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYE 512
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 1/111 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NSL+ ++ K H +K A+++++K I P+ TYN+ + L + A+ V +++
Sbjct: 406 YNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLL 465
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
G W T++ + + + GLF++AE L ++E+ D Y+ +I
Sbjct: 466 IKGYNVNAW-TYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETII 515
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/255 (16%), Positives = 106/255 (41%), Gaps = 21/255 (8%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKT-GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+M+++ S + FN ++T KT H + ++ +M++ + PD +T ++ +
Sbjct: 54 FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113
Query: 68 AVNDISGAERVIEEMKR-----DGRV---------------AADWTTFSNLASIYVEAGL 107
+ ++ A V ++ + +G+V + T+ L + + G
Sbjct: 114 HLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQ 173
Query: 108 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 167
A + L+++E + + ++ Y +I + +++ Y ++ + + +++ +
Sbjct: 174 TRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSS 233
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+I + A + F E D N+++ A KEG+++ A+ + + G
Sbjct: 234 LIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEG 293
Query: 228 ADPNAKTWEIFSDYY 242
+P T+ D Y
Sbjct: 294 VEPTVVTYNTLMDGY 308
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA AL++K+KE + + +N L+ K G + + Q++ +++TYN+
Sbjct: 419 VDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNI 478
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L AE ++ +M+ +G + D T+ + EKA++ L+E+
Sbjct: 479 MINGLCKEGLFDEAEVLLSKMEDNG-IIPDAVTYETIIQALFHKDENEKAQKLLREM--- 534
Query: 122 NAHRDLSAYQFLI--TLYGQTGNL 143
+ + Y F I TL G+T NL
Sbjct: 535 -VIKGVVVYAFEIRRTLVGRTLNL 557
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 81/206 (39%), Gaps = 2/206 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A L +M + + +NSL+ K G ++ EM + I D TYN
Sbjct: 348 MVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYN 407
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A +++++K G + + T++ L + G + A+ ++L
Sbjct: 408 SLIDVFCKNQHVDKAIALVKKIKEHG-IQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLI 466
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + + Y +I + G E + + ++Y +IQ L + +
Sbjct: 467 KGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEK 526
Query: 181 AEKCFKEWE-SGCATYDIRVTNVMIG 205
A+K +E G Y + ++G
Sbjct: 527 AQKLLREMVIKGVVVYAFEIRRTLVG 552
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 146/330 (44%), Gaps = 16/330 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTY 59
M KA ++ ++K ++ +NS++ + + GH EKI + EM PD+ TY
Sbjct: 146 MVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTY 205
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+V + A + A R+ +EMK +G + ++ L +IY ++G EKA ++E++
Sbjct: 206 SVLVSAFVKLGRDDYAIRLFDEMKANG-LHPTAKIYTTLLAIYFKSG-DEKALGLVQEMK 263
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKD 177
++ + Y LI G++G + + Y ++ ++ P+ I+ N+I +
Sbjct: 264 DKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLIN--NLINIFGKAGR 321
Query: 178 LPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
L A K F + S CA + V+ + + A E+ + G P++ T+
Sbjct: 322 LEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYS 381
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGF 295
I D + + ++ A+ LE+ + G + P + + + K + A E F
Sbjct: 382 ILIDGFCKTNRVEKALLLLEEMDEKG------FPPCPAAYCSLINALGKAKRYEAANELF 435
Query: 296 LEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
LE LK+ ++ +I+ GR S
Sbjct: 436 LE-LKENCGRSSARIYAVMIKNLGKCGRPS 464
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 103/245 (42%), Gaps = 2/245 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLM-TLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A L ++M+ L + + +N+++ L+ + + ++MKA+ + P S+TY++
Sbjct: 323 EDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSI 382
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ N + A ++EEM G + +L + +A +E A EL+
Sbjct: 383 LIDGFCKTNRVEKALLLLEEMDEKGFPPCP-AAYCSLINALGKAKRYEAANELFLELKEN 441
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
Y +I G+ G SE ++ ++ N +Y ++ LV + A
Sbjct: 442 CGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEA 501
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E T D+ N+++ A+ GR E A E+ + + P+A ++
Sbjct: 502 FSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGS 561
Query: 242 YLRNG 246
R+G
Sbjct: 562 LSRSG 566
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 2/238 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL-AAVNDISGAERVIEEMK 83
N+L+ ++ K G E + +M++ P+ TYN ++AL + S A E+MK
Sbjct: 310 NNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMK 369
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + +T +S L + + EKA L+E++ + +AY LI G+
Sbjct: 370 ANGVTPSSFT-YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 428
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ L+ ++ Y MI+ L A F E + D+ N +
Sbjct: 429 EAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNAL 488
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+ + G +E A G P+ + I + R G + A + K D+
Sbjct: 489 MSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDS 546
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 5/197 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
EKA LLE+M E GF P + SL+ K E + E+K + + Y
Sbjct: 393 VEKALLLLEEMDEK--GFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIY 450
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
V ++ L S A + EMK+ G D ++ L S V AG+ E+A AL+ +E
Sbjct: 451 AVMIKNLGKCGRPSEAVDLFNEMKKIG-CNPDVYAYNALMSGLVRAGMIEEAFSALRTME 509
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
DL+++ ++ +TG + ++ ++ + +SY ++ L
Sbjct: 510 ENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFE 569
Query: 180 GAEKCFKEWESGCATYD 196
A K +E S YD
Sbjct: 570 EAAKLMREMGSRGFEYD 586
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 99/270 (36%), Gaps = 43/270 (15%)
Query: 55 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
D TY +R L ++I+EM R S + I +A + KA
Sbjct: 94 DLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSV 153
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
++++R S Y +I + Q G+ +++ ++ + N
Sbjct: 154 FYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEM-------------------CN 194
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
D CF D +V++ A+ K GR + A L + + G P AK
Sbjct: 195 EGD------CFP---------DTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKI 239
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG 294
+ Y ++GD K A+ +++ D G P+ T ++ + V+ A
Sbjct: 240 YTTLLAIYFKSGDEK-ALGLVQEMKDKG------CAPTVFTYTELIKGLGKSGRVEDAYS 292
Query: 295 -FLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
FL +LK V + LI + AGR
Sbjct: 293 VFLNMLKDGCKP-DVVLINNLINIFGKAGR 321
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A + L M+E N ++ A+TG PE+ + +MK S I PD+ +YN
Sbjct: 497 MIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYN 556
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 98
+ +L+ A +++ EM G D T+S++
Sbjct: 557 TILGSLSRSGMFEEAAKLMREMGSRG-FEYDHITYSSI 593
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 1/240 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL ++++ L + +N+L++ +++ + E + +EM AS PD +TYN +
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHG 339
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AER+ E+ G D T+++L + + G +K E +EL ++
Sbjct: 340 RCGKAEEAERLFGELVEKG-FMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNE 398
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +YG+ G L ++ +R ++Y MI L + + A K ++
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLED 458
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + +I AYAK GR +AE+ + G P+ + + D + R+G+
Sbjct: 459 MADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGE 518
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 115/252 (45%), Gaps = 24/252 (9%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K E E++ + + + +N+++ +Y K G + + EM+A PD+ TY V
Sbjct: 379 VDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTV 438
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L ++ I+ A +V+E+M D + FS L Y + G AE+ +
Sbjct: 439 MIDSLGKMDKIAEAGKVLEDMA-DAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIAS 497
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL---NMIQVLVNLKDL 178
D AY ++ ++ ++G ++ R++R++ N +Y +M QVL L L
Sbjct: 498 GVKPDRLAYLVMLDVFARSGETEKMLRLYRTM-------MNDNYRPDDDMYQVL--LVAL 548
Query: 179 PGAEKC------FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
+KC ++ E C ++ ++I A + +L ++A +G P+A
Sbjct: 549 AKEDKCEEIEEIIQDMELLCQMSLGVISTILIKARC----VSQGGKLLKKACLQGYKPDA 604
Query: 233 KT-WEIFSDYYL 243
K+ W I + Y +
Sbjct: 605 KSLWSIMNAYVM 616
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 103/262 (39%), Gaps = 38/262 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI--IQEMKASSIMPDSYTYN 60
+ A LL+ M + + + FN+L+ +K+G A+ + E++ S + PD TYN
Sbjct: 238 DDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYN 297
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + +++ A V EEM D T++ + S++ G E+AER EL
Sbjct: 298 TLISACSQSSNLEDAVTVFEEMIA-SECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVE 356
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D Y L+ + + GN+ +V L A I+Y
Sbjct: 357 KGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITY--------------- 401
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
N MI Y K GRL+ A L + R G P+A T+ + D
Sbjct: 402 --------------------NTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMID 441
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + A LE D G
Sbjct: 442 SLGKMDKIAEAGKVLEDMADAG 463
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 94/232 (40%), Gaps = 1/232 (0%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
++++++ S ++ +AK G ++ I MKA+ +P+ + Y L N
Sbjct: 840 ELQDMDFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHN 899
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
E +I EM+ G D + F++L ++Y AG F++ + + + D Y
Sbjct: 900 RFRDVELMIAEMEGAG-FKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTY 958
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
LI +Y ++ E + + + SY +++ + A++ F+E S
Sbjct: 959 NTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRS 1018
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + ++M+ Y G AE L + G +P T I Y
Sbjct: 1019 KSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSY 1070
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 5/216 (2%)
Query: 49 ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF 108
A S P S V + L S AE V +G A F+ + +Y +G F
Sbjct: 181 ARSTAPASRAVAVVLGVLGRARQDSIAEEVFLRFAGEG---ATVQVFNAMMGVYARSGRF 237
Query: 109 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE--VYRIWRSLRLAFPNTANISYL 166
+ A + L + +R DL ++ LI ++G L+ + +R + I+Y
Sbjct: 238 DDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYN 297
Query: 167 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 226
+I +L A F+E + D+ N M+ + + G+ E AE L +
Sbjct: 298 TLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEK 357
Query: 227 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
G P+A T+ + + G++ E+ + G
Sbjct: 358 GFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAG 393
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 95/220 (43%), Gaps = 11/220 (5%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN----VWMRALAAVNDISGAERVI 79
FNSL+ +Y G+ ++ + Q + + + PD TYN ++ R+L + ++
Sbjct: 923 FNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFT----LL 978
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
EM + G + ++ +L + +A L E+A++ +E+ +++ + S Y ++ +Y
Sbjct: 979 NEMGKRG-LTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRN 1037
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG-AEKCFKEWESGCATYDIR 198
GN S+ + ++ I+ ++++ P AE +S
Sbjct: 1038 AGNHSKAENLLAVMK-EDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTL 1096
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ + AY K G + + +R G +P+ + W F
Sbjct: 1097 PYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCF 1136
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 97/245 (39%), Gaps = 41/245 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L++ +++ + G +N+L+ YA++G EK A+ M + +P + N
Sbjct: 763 QQAEILVKGLRQAS-GIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGM 821
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
MRAL DGR L +YV G EL++ +
Sbjct: 822 MRALIV----------------DGR----------LDELYVVVG----------ELQDMD 845
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
S ++ + + G++ EV +I+ ++ A PN Y +M +L +
Sbjct: 846 FKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMH--LYRSMTSLLCHHNRFRD 903
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E E E D+ + N ++ Y G + ++ + G +P+ T+
Sbjct: 904 VELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIV 963
Query: 241 YYLRN 245
Y R+
Sbjct: 964 MYCRS 968
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL MKE + + + LMT Y G P + ++ +K+SS+ + Y+
Sbjct: 1043 KAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVF 1102
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 101
A D + + EMKRDG V D WT F AS+
Sbjct: 1103 DAYLKNGDYDLGIKKLLEMKRDG-VEPDHQVWTCFIRAASL 1142
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ LL +M + L + SL+ AK E+ + +EM++ S + Y++
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMM 1031
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ + S AE ++ MK DG + T L + Y AG +AE L L++ +
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDG-IEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSS 1090
Query: 123 AHRDLSAYQFLITLYGQTGN 142
Y + Y + G+
Sbjct: 1091 LEVSTLPYSTVFDAYLKNGD 1110
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 115/258 (44%), Gaps = 1/258 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+ E+MK+ + + +N+L+ + K K + EMKA+ + P+ TY+ ++ A
Sbjct: 112 CIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAF 171
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A + +M+R ++T +++L +AG +A + ++E+ +
Sbjct: 172 CKEGMLQEAIKFFVDMRRVALTPNEFT-YTSLIDANCKAGNLAEALKLVEEILQAGIKLN 230
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y L+ + G + E ++R++ A +Y ++ + K++ A+ K
Sbjct: 231 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 290
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E + C D+ + ++ E RLE A+ L + G + NA + D Y ++G
Sbjct: 291 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 350
Query: 247 DMKLAVDCLEKAIDTGRG 264
A+ LE+ +D G
Sbjct: 351 QATEALTLLEEMLDLVDG 368
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 121/301 (40%), Gaps = 7/301 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A KM++ + N+L+ +K G + ++M A+ I +TYN
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + L D+ A + +MK G D T+++L + + GL ++ +++++
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAG-FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKD 119
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ Y LI + + + + + ++ ++Y I L
Sbjct: 120 ADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQE 179
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K F + T + +I A K G L A +L E + G N T+ D
Sbjct: 180 AIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
G MK A + ++ G P+ ET + F + K+++ A+ L+ +K
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAG------VAPNQETYTALVHGFIKAKEMEYAKDILKEMK 293
Query: 301 K 301
+
Sbjct: 294 E 294
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 3/235 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N ++ Y + G P+K + M+A ++PD +Y+ + L V + AE EMK
Sbjct: 187 YNDVINAYCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMK 246
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ T + L S Y L E+ E+ +++ E+ +Y LI Y + G L
Sbjct: 247 SKS-YKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRL 305
Query: 144 SEVYRIWRSLRLA-FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
+ + ++++ P A I Y ++ N + G + K+ + + + N+
Sbjct: 306 DQAKAAFHNMKVENVPANAFI-YSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNI 364
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
+I Y K GRL A + + G P+ TW + + R G + A+D L++
Sbjct: 365 LIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQ 419
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 120/300 (40%), Gaps = 7/300 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+A MK N+ ++ ++ LM Y + ++++M AS+I P+ + +N+
Sbjct: 306 DQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNIL 365
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A R +M ++G D T+++L + AGL +A LK+++ R
Sbjct: 366 IDTYGKFGRLPQAMRTFAQMDKEG-FKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERE 424
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L Y ++ G E+ + +R + ++Y ++ K A
Sbjct: 425 CVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREAS 484
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ K+ +S V + +YAK G E A E+ + + G + N + + +
Sbjct: 485 EYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAF 544
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
G A + ++ G P T T M+ + + +D E + +A
Sbjct: 545 GVAGKYVEAFSVFDYILEVGMS------PDVVTYTTLMKALIKAEQLDQVPDVYEQMVRA 598
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/321 (18%), Positives = 130/321 (40%), Gaps = 7/321 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ AEA +MK + + N+L++ Y + E++ ++Q+ + + + +++Y +
Sbjct: 236 DDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLL 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + + A+ MK + V A+ +S L Y A ++ R LK++ N
Sbjct: 296 IDAYSRAGRLDQAKAAFHNMKVEN-VPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASN 354
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + LI YG+ G L + R + + +++ ++I+ + A
Sbjct: 355 IKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEAL 414
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K+ + + N+++ A R + L + R +G DPN T+ D Y
Sbjct: 415 DLLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSY 474
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ + A + L++ G PS+ + + + A + ++K
Sbjct: 475 GTSKRYREASEYLKQMKSQG------LQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKD 528
Query: 303 VDDLGVEVFEPLIRTYAAAGR 323
+L + + LI + AG+
Sbjct: 529 GVELNLSMLNLLINAFGVAGK 549
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 8/290 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVW 62
+A + +KM+E+ + + +N ++ +Y K G P K+ ++ MK++ I PDSYTYN
Sbjct: 218 EAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTL 277
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N A V++EMK G + D T++ L +Y ++ ++A L+E+E
Sbjct: 278 ISCCRRGNLYEEAAGVLKEMKLAG-FSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNG 336
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI+ Y + G L + + + +Y ++ A
Sbjct: 337 CPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAV 396
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+E + +I N +I + G+ ++ E + P+ TW +
Sbjct: 397 QIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVF 456
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+NG M V + K + +VP +T T + + + D A
Sbjct: 457 GQNG-MDSEVSGVFKEMKR-----AGFVPERDTFNTLISSYSRCGSFDQA 500
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 128/291 (43%), Gaps = 9/291 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A +L++MK + +N+L+ +Y K+ ++ ++QEM+ + P TYN
Sbjct: 286 LYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYN 345
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + A + +M G + D T++ L S + +AG + A + +E+ N
Sbjct: 346 SLISAYARDGLLEDALELKNQMVEKG-IKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRN 404
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + LI ++G G +E+ +++ ++ F + +I N + + +
Sbjct: 405 EGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIK-TFQCSPDIVTWNTLLSVFGQNGMDS 463
Query: 181 -AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
FKE + + N +I +Y++ G + A + +R G +P+ ++
Sbjct: 464 EVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVL 523
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
R G K + L + D G+ P+ T + + + K+++
Sbjct: 524 AALARGGLWKQSEKVLAEMKD------GRCKPNELTYCSLLHAYANGKEIE 568
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 136/336 (40%), Gaps = 42/336 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + ++MK FN+L++ Y++ G ++ A+ + M + + PD +YN
Sbjct: 461 MDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYN 520
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY---------------VEA 105
+ ALA +E+V+ EMK DGR + T+ +L Y + +
Sbjct: 521 AVLAALARGGLWKQSEKVLAEMK-DGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYS 579
Query: 106 GLFE--------------------KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G+ E + ERA EL R D++ ++++YG+ +++
Sbjct: 580 GIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAK 639
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
I ++ + +Y +++ + + +E+ +E + DI N +I
Sbjct: 640 ANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIY 699
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AY + GR+ +A + R G P+ T+ F Y + A+D + I G
Sbjct: 700 AYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHG--- 756
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
P+ T + + + + D A F+ L+K
Sbjct: 757 ---CKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRK 789
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 109/261 (41%), Gaps = 5/261 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K L+++MK + S +N+L++ + E+ +++EMK + PD TYN +
Sbjct: 254 KMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALL 313
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V++EM+ +G T+++L S Y GL E A ++ +
Sbjct: 314 DVYGKSRRSKEAMEVLQEMEGNG-CPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGI 372
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y L++ + + G +I+ +R PN + L I++ N
Sbjct: 373 KPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNAL--IKMHGNRGKFTEM 430
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K F++ ++ + DI N ++ + + G + + +R G P T+
Sbjct: 431 MKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISS 490
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y R G A+ ++ ++ G
Sbjct: 491 YSRCGSFDQAMAVYKRMLEAG 511
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 132/357 (36%), Gaps = 72/357 (20%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +LL + + + S++T + G + + ++M+ P TYNV +
Sbjct: 184 AASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILN 243
Query: 65 ALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ N + G +++ MK G +A D T++ L S L+E+A LKE++
Sbjct: 244 VYGKMGMPWNKMVG---LVDRMKSAG-IAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKL 299
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y L+ +YG++ E + L+++ G
Sbjct: 300 AGFSPDKVTYNALLDVYGKSRRSKEAMEV-------------------------LQEMEG 334
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+GC I N +I AYA++G LE+A ELK + +G P+ T+
Sbjct: 335 ---------NGCPP-SIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLS 384
Query: 241 YYLRNGDMKLAVDCLEKAIDTG--------------RGDGGKWV---------------P 271
+ + G K AV E+ + G G+ GK+ P
Sbjct: 385 GFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSP 444
Query: 272 SSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 328
T T + F Q G + +K+A + F LI +Y+ G M
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM 501
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KA +L+ MK S +NSLM +Y+++ + E+ I++E+ A I PD +YN
Sbjct: 636 MVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYN 695
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A RV+ EM+ G A D T++ + Y +F +A + +
Sbjct: 696 TVIYAYCRNGRMRDASRVLSEMRESGP-APDIITYNTFIASYAADSMFVEAIDVVCYMIK 754
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ S Y ++ Y + E +LR P+ +
Sbjct: 755 HGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDPHIS 795
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 142/363 (39%), Gaps = 52/363 (14%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A L +M E + + +L++ + K G + I +EM+ P+ T+N
Sbjct: 356 LLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFN 415
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + +V E++K + + D T++ L S++ + G+ + KE++
Sbjct: 416 ALIKMHGNRGKFTEMMKVFEDIK-TFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKR 474
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + LI+ Y + G+ + +++ + A N SY ++ L
Sbjct: 475 AGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQ 534
Query: 181 AEKCFKEWESG-CATYDIRVTNVMIGAYAKEGRLEN----AEEL---------------- 219
+EK E + G C ++ + ++ AYA +E AEE+
Sbjct: 535 SEKVLAEMKDGRCKPNELTYCS-LLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLV 593
Query: 220 -----------KERA----RRRGADPNAKTWEIFSDYYLRNGDMKLA---VDCLEKAIDT 261
ERA R+RG P+ T Y R + A +DC+++
Sbjct: 594 LVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKR---- 649
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAA 320
G + PS T + M + + + + +E L EIL K + + + +I Y
Sbjct: 650 -----GGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRP-DIISYNTVIYAYCR 703
Query: 321 AGR 323
GR
Sbjct: 704 NGR 706
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 150/349 (42%), Gaps = 30/349 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+++M + L + + + L+ Y K+ EK+ + + M +M D+ Y +
Sbjct: 449 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 508
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L++ ++ A RV+ E++++G V D +S+L S + EKA L E+ +
Sbjct: 509 IHNLSSSGNMEAAFRVLSEIEKNGSV-PDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y LI ++G++S ++ S+ + PN ++Y ++I + D+
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC--VTYTSLIDGSCKVGDISN 625
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E + T D V +V+ + G LE A L E RG + ++ D
Sbjct: 626 AFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVD 684
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI----------------RTFMRHFE 284
+ + G M+ + L + GRG VP++ TI T +
Sbjct: 685 GFCKRGKMQETLKLLH--VIMGRG----LVPNALTIENIISGLSEAGKLSEVHTIFVELQ 738
Query: 285 QEKDVDGAEGFLEILKKAVDD--LGVEVFEPLIRTYAAAGRTSPVMLRR 331
Q+ A F + ++ + ++V + +IR + G ++ R
Sbjct: 739 QKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLR 787
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ +A+ALL++M L + + + +L+ + + G+ ++ +I+EM A+ + P+ TY+
Sbjct: 203 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 262
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R L + + A ++++M RD D T++ + + + A R L E+EN
Sbjct: 263 LVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENA 321
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ Y +I Q+G + + + Y +I ++ A
Sbjct: 322 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 381
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F + D+ N +I +K GR+E + + + + RG PN T+
Sbjct: 382 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 441
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
YL+NGD++ A +++ +DTG
Sbjct: 442 YLKNGDLESAEQLVQRMLDTG 462
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A+ +L +M+E G +++ +N L+ ++G E+ ++M+ ++PD +TY
Sbjct: 134 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGAL 193
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+ +++EM + + ++NL ++ G ++A + +KE+
Sbjct: 194 INGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 252
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y L+ + G + + + + I+Y +I+ + A
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAF 312
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E E+ + ++ ++MI + G E A +L E +G PNA + Y
Sbjct: 313 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 372
Query: 243 LRNGDMKLAVDCLEK 257
R G++ LA + +K
Sbjct: 373 CREGNVSLACEIFDK 387
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 19/234 (8%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL+ K G + EM A+ I PD++ Y+V ++ D+ A +IEEM
Sbjct: 610 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 669
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A ++F+NL + + G ++ + L + R + + +I+ + G L
Sbjct: 670 LRGH--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 727
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
SEV+ I+ L+ +A + ++ ++N +P + V + M
Sbjct: 728 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-----------------LDVVDDM 770
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
I + KEG L+ A L++ + A ++ D R G + A++ L++
Sbjct: 771 IRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 824
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++++M + + + +++L+ K G ++ ++++M S PD+ TYN+
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++ A R++ EM+ G ++ + T+S + ++G EKA L+E+ +
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAG-ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI+ Y + GN+S I+ + Y ++I L + + +
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 417
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F + + + + +I Y K G LE+AE+L +R G PN + + Y
Sbjct: 418 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 477
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
++ D++ + +D G
Sbjct: 478 FKSDDIEKVSSTFKSMLDQG 497
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 5/262 (1%)
Query: 5 AEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
A ALL K++E +G P +++L+ Y K + ++ EM+ ++ TYN
Sbjct: 97 AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYN 156
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + L + A ++M+ G V D T+ L + ++ +A+ L E+
Sbjct: 157 VLIAGLCRSGAVEEAFGFKKDMEDYGLVP-DGFTYGALINGLCKSRRSNEAKALLDEMSC 215
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y LI + + GN E +++ + + A I+Y N+++ L + +
Sbjct: 216 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 275
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K+ D N++I + + ++A L G PN T+ I
Sbjct: 276 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIH 335
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
++G+ + A D LE+ G
Sbjct: 336 GLCQSGEPEKASDLLEEMTTKG 357
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 134/324 (41%), Gaps = 9/324 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A AL++ M L + +NS++ ++G +K + +EM + PD ++ +
Sbjct: 147 EAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 206
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V +I A ++ +EM+ G + D +FS L ++ G + A L+E+
Sbjct: 207 IGGFCRVGEIEEALKIYKEMRHRG-IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y +I + + G +S+ R+ + ++Y ++ L + L AE
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
E D+ +I Y EG+L+ A +L + + P+ T+ D
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKK 301
R GD+ A D + + P+ T + ++ V+ A GFL E++ K
Sbjct: 386 CRQGDLDKANDLWDDM------HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 439
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTS 325
+ + + +I+ Y +G S
Sbjct: 440 GILP-NIMTYNSIIKGYCRSGNVS 462
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 9/291 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K +A++ +M++ + + N ++ + G E A++ M + + P TYN
Sbjct: 112 DKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSV 171
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L A V +EM G VA D +F+ L + G E+A + KE+ +R
Sbjct: 172 LKGLCRSGMWDKAWEVFKEMDDFG-VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL ++ LI L+ + G + R +R + Y +I + A
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290
Query: 183 KCFKEWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E GC D+ N ++ KE RL +AE L R RG P+ T+
Sbjct: 291 RVRDEM-VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHG 349
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
Y G + A+ + ++ + P T T + ++ D+D A
Sbjct: 350 YCIEGKLDKALQLFDTMLNQ------RLRPDIVTYNTLIDGMCRQGDLDKA 394
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 135/320 (42%), Gaps = 7/320 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + ++M+ + + F+ L+ L+A+ G + A ++EM+ ++PD Y +
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +S A RV +EM G D T++ L + + AE L E+ R
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCG-CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL + LI Y G L + +++ ++ ++Y +I + DL A
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 395
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + S + +++I ++ ++G++E+A + +G PN T+ Y
Sbjct: 396 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 455
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R+G++ L+K + K P T T + + +E + A L +++K
Sbjct: 456 CRSGNVSKGQKFLQKMMVN------KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKE 509
Query: 303 VDDLGVEVFEPLIRTYAAAG 322
V + LI ++ G
Sbjct: 510 KVQPDVVTYNMLINGFSVHG 529
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 112/259 (43%), Gaps = 1/259 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE LL +M+E + F +L+ Y G +K + M + PD TYN +
Sbjct: 324 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 383
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ D+ A + ++M + + T+S L + E G E A L E+ N+
Sbjct: 384 GMCRQGDLDKANDLWDDM-HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 442
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y +I Y ++GN+S+ + + + + + I+Y +I + + A K
Sbjct: 443 PNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 502
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E D+ N++I ++ G ++ A + E+ +G +P+ T+ + ++
Sbjct: 503 LNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVT 562
Query: 245 NGDMKLAVDCLEKAIDTGR 263
G+ K A ++ + G+
Sbjct: 563 AGNSKEAFQLHDEMLQRGK 581
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 139/351 (39%), Gaps = 13/351 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + ++M + + F L+ + + G E+ I +EM+ I PD +++
Sbjct: 180 MWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFS 239
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A + EM+ G V D ++ + + AGL A R E+
Sbjct: 240 CLIGLFARRGKMDHAMAYLREMRCFGLV-PDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 298
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y L+ + L + + +R ++ +I L
Sbjct: 299 CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 358
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F + DI N +I ++G L+ A +L + R PN T+ I D
Sbjct: 359 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILID 418
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE--I 298
+ G ++ A L++ I+ G +P+ T + ++ + + +V + FL+ +
Sbjct: 419 SHCEKGQVEDAFGFLDEMINKG------ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 472
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
+ K DL + LI Y + +L ++ EKV+ + +L
Sbjct: 473 VNKVSPDL--ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 521
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 69/159 (43%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T + + Y +A F+K + + E+E R D+ + ++ + G+ + S+
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
++Y ++++ L A + FKE + D+R ++IG + + G +
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
E A ++ + R RG P+ ++ + R G M A+
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 255
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A L++M + + M +NS++ Y ++G+ K +Q+M + + PD TYN
Sbjct: 426 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 485
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + A +++ M+++ +V D T++ L + + G ++A +++ +
Sbjct: 486 LIHGYIKEDKMHDAFKLLNMMEKE-KVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 544
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D Y +I + GN E +++
Sbjct: 545 GIEPDRYTYMSMINGHVTAGNSKEAFQL 572
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 128/300 (42%), Gaps = 13/300 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKA LE+M+ L + + + +N L+ Y E +I EM PD +Y
Sbjct: 168 MLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYY 227
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
M L I VIE+M+ D ++ AD T++ L + + ++A + L+E +
Sbjct: 228 TVMGFLCKNRRIREVMDVIEKME-DTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQK 286
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
R D Y ++ Y + G + + I + R P+ ++Y +I ++
Sbjct: 287 RGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDV--VTYTAIINGFSQAGEV 344
Query: 179 PGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A K ++ ++ GC + T + G ++G A E+ + + + PNA T+ +
Sbjct: 345 GQARKMLQQMYKHGCKPNTVSYTAFLKG-LCQKGNSSEAREMMKASEEQWWTPNAITYSV 403
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ R G + A D + + I G + P+ I ++ + VD A+ F+E
Sbjct: 404 VMHGFRREGKLSDACDVVREMIGKG------FFPTPVEINLLLQSLCRIGRVDEAKKFME 457
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 110/273 (40%), Gaps = 40/273 (14%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++++ Y K G ++ I+ EM +PD TY + + ++ A +++++M
Sbjct: 296 YSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMY 355
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G + +++ + G +A +K E + + Y ++ + + G L
Sbjct: 356 KHG-CKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKL 414
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVT 200
S+ + R + + FP I+ L +Q L + + A+K +E GCA + T
Sbjct: 415 SDACDVVREMIGKGFFPTPVEINLL--LQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFT 472
Query: 201 NVM----------------------------------IGAYAKEGRLENAEELKERARRR 226
V+ I A K+GR+E A EL + ++
Sbjct: 473 TVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKK 532
Query: 227 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
G DP T+ Y + G ++ ++ L+K +
Sbjct: 533 GIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKML 565
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 43/243 (17%), Positives = 89/243 (36%), Gaps = 7/243 (2%)
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ M + + + A +V+ M++ G + + + + V A + EKA R L+ +
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAG-IEPNLLVCNTAIHVLVMANMLEKALRFLERM 179
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ ++ Y LI Y + + + + L + +SY ++ L + +
Sbjct: 180 QLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRI 239
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ E D N +I K + A + A++RG + +
Sbjct: 240 REVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAI 299
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
D Y + G M A + + + G +P T + F Q +V A L+
Sbjct: 300 VDSYCKEGRMDQAKEIVNEMFTRG------CIPDVVTYTAIINGFSQAGEVGQARKMLQQ 353
Query: 299 LKK 301
+ K
Sbjct: 354 MYK 356
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 7/295 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y K G + ++ EM + PD TY++ + A A +++EM+
Sbjct: 295 YNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 354
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
DG V FS + + + + G ++KA L+E+ D Y +I +G+ L
Sbjct: 355 ADG-VKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL 413
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ +R +++ +I A + F E N+M
Sbjct: 414 GHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIM 473
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I +E R E E + + +G PN T+ D Y R+G K AVDC+E +
Sbjct: 474 INLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAM----K 529
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
DG K PS + + Q D A ++ ++ + V LI +
Sbjct: 530 ADGLK--PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAF 582
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 118/299 (39%), Gaps = 42/299 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A LL++M+ + SS F+ ++ + G +K A+++EM AS + PD + YNV
Sbjct: 344 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVM 403
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N + A + M+ +G + D T++ L + + G ++A E+ N
Sbjct: 404 IDTFGKYNCLGHAMDAFDRMREEG-IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 462
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I L G+ W G E
Sbjct: 463 CPLGTTTYNIMINLLGEEQR-------WE----------------------------GVE 487
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
E + +I ++ Y + GR + A + E + G P+ + + Y
Sbjct: 488 AMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAY 547
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ G A++ + KA+ R DG + S+ + + + F +++ + A L+ +K+
Sbjct: 548 AQRGLADHALNVV-KAM---RADGLE--ASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 600
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E EA+L +MKE L + + + +L+ +Y ++G ++ I+ MKA + P Y+
Sbjct: 484 EGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHAL 543
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A A V++ M+ DG + A ++L + + E +A L+ ++
Sbjct: 544 VNAYAQRGLADHALNVVKAMRADG-LEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENG 602
Query: 123 AHRDLSAYQFLI 134
D+ Y L+
Sbjct: 603 LRPDVITYTTLM 614
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 2/245 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +L+ +A+ G EK I ++++ + + PD Y YN M A + GA + M+
Sbjct: 311 FTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ 370
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G D +++ + Y AGL E A+ + ++ + ++ L++ Y + G +
Sbjct: 371 HMG-CEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 429
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ I + + +M+ + L E+ E G DI N++
Sbjct: 430 AKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNIL 489
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG- 262
I Y + G EEL R P+ TW Y R ++ E+ ID G
Sbjct: 490 INIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGC 549
Query: 263 RGDGG 267
DGG
Sbjct: 550 YPDGG 554
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 126/322 (39%), Gaps = 42/322 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAEA+ +M++ S++ +N+ + K G +K I + MK P + TY
Sbjct: 218 LLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYT 277
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A +V EM R + + TF+ L + + GL EKAE ++L+
Sbjct: 278 MLINLYGKASKSYMALKVFHEM-RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQE 336
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ AY L+ Y + G FP G
Sbjct: 337 AGLEPDVYAYNALMEAYSRAG---------------FPY--------------------G 361
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F + D N+M+ AY + G E+A+ + E +R G P K+ +
Sbjct: 362 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLS 421
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y R G + C E+ ++ G K P + + + + + + + E L ++
Sbjct: 422 AYSRAGKV---AKC-EEIVNQMHKSGIK--PDTFVLNSMLNLYGRLGQFEKMEEVLTAME 475
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
K + + LI Y AG
Sbjct: 476 KGPYPADISTYNILINIYGRAG 497
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Query: 50 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 109
SS PD YN+ + A + AE E+ + R T++ L Y +GL E
Sbjct: 162 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLEL-LEARCVPTEDTYALLLKAYCTSGLLE 220
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
KAE E+ Y I + G+ + I+ ++ + +Y +I
Sbjct: 221 KAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLI 280
Query: 170 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
+ A K F E S +I ++ A+A+EG E AEE+ E+ + G +
Sbjct: 281 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 340
Query: 230 PNAKTWEIFSDYYLRNG 246
P+ + + Y R G
Sbjct: 341 PDVYAYNALMEAYSRAG 357
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 128/309 (41%), Gaps = 16/309 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A +LE+M ++ N ++ K G + + M + PD+ +Y
Sbjct: 300 MVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYT 359
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ L A+ +++EM R + TF+ I + GL E+A ++++
Sbjct: 360 TVLKGLCRAERWEDAKELLKEMVRKN-CPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y L+ + G + ++ S+ PNT I+Y ++ L N + L
Sbjct: 419 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK-PNT--ITYTTLLTGLCNAERLDA 475
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + E + CA ++ NV++ + ++G ++ A EL E+ G PN T+
Sbjct: 476 AAELLAEMLQKDCAP-NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
D + + + A++ L + G P T + + +E V+ A I
Sbjct: 535 DGITNDCNSEEALELLHGLVSNGVS------PDIVTYSSIIGVLSREDRVEEAIKMFHI- 587
Query: 300 KKAVDDLGV 308
V DLG+
Sbjct: 588 ---VQDLGM 593
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/251 (16%), Positives = 101/251 (40%), Gaps = 3/251 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +L++M+ + + +N ++ + G + + + + PD+ +Y +
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ L A E + EM + + TF L + G+ E+A + L+++
Sbjct: 258 KGLCAAKRWEDVEELFAEMM-EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + +I + G + + ++ ++ + ISY +++ L + A++
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE C ++ N I ++G +E A L E+ G + N T+ + +
Sbjct: 377 LLKEMVRKNCPPNEVTF-NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 243 LRNGDMKLAVD 253
G + A++
Sbjct: 436 CVQGRVDSALE 446
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 95/235 (40%), Gaps = 8/235 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A+ LL++M N + + FN+ + + + G E+ +I++M + TYN
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A + M + T++ L + A + A L E+ ++
Sbjct: 432 VNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKD 487
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + L++ + Q G + E + + PN I+Y ++ + N +
Sbjct: 488 CAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNL--ITYNTLLDGITNDCNSEE 545
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A + S + DI + +IG ++E R+E A ++ + G P A +
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIY 600
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +LL+ M S + + L+ K+ + ++ EM+A P+ TYNV +
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + A + + G D +++ + A +E E E+ +N
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAE 182
+ + L+ + + G + ++ + AN + N+ I + + A
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMS-GHGCAANTTLCNIVINTICKQGRVDDAF 340
Query: 183 KCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ S GC+ I T V+ G E R E+A+EL + R+ PN T+ F
Sbjct: 341 QFLNNMGSYGCSPDTISYTTVLKGLCRAE-RWEDAKELLKEMVRKNCPPNEVTFNTFICI 399
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ G ++ A +E+ + G
Sbjct: 400 LCQKGLIEQATMLIEQMSEHG 420
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 4/182 (2%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD Y +R L S A RV+ +R G A D ++ L + Y G + A R
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG-TAVDVFAYNTLVAGYCRYGQLDAARR 134
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+ + D Y +I G + E + + + ++Y +++ +
Sbjct: 135 LIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
A + E + T +I NV+I +EGR+++A E R G P+
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251
Query: 234 TW 235
++
Sbjct: 252 SY 253
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 99/273 (36%), Gaps = 45/273 (16%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y + G + +I M + PD+YTY +R L + A ++++M
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 172
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G T++ L ++ F +A L E+ + ++ Y +I + G +
Sbjct: 173 HRG-CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ L +SY + LK L A K WE
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTV------LKGLCAA----KRWE-------------- 267
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ EEL + PN T+++ ++ R G ++ A+ LE+ +G
Sbjct: 268 -----------DVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM--SGH 314
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
G + I T + + VD A FL
Sbjct: 315 GCAANTTLCNIVINTICK----QGRVDDAFQFL 343
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 3/264 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A+ + E M E + + +N+LM Y ++ + M P +YN
Sbjct: 202 MILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYN 261
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ++ I A+ ++ EM + D T+S L + + G + A++ L+E+ +
Sbjct: 262 ILIKGHCKSGRIDEAKGLLAEMSHKA-LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRS 320
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL Y ++ + G+L E + + ++++ + Y +IQ + N L
Sbjct: 321 YGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEA 380
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F D+ VMI K G A EL G PN+ T+ +
Sbjct: 381 ARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQ 440
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRG 264
+LRNGD A +E+ + GRG
Sbjct: 441 GFLRNGDTSNAGRLIEEMV--GRG 462
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 15/250 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ L M S +N L+ + K+G ++ ++ EM ++ PD+ TY+
Sbjct: 239 DEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTL 298
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ A++++EEM+ G + D T+S + + G ++A LK ++
Sbjct: 299 MKGFCQDGRPQDAQKLLEEMRSYG-LLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK 357
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ Y LI G L ++ +L + ++Y MI L LK E
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL--LKGGLSNE 415
Query: 183 KC--FKEWE-SGC----ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
C F++ GC TY NV+I + + G NA L E RG ++ T+
Sbjct: 416 ACELFRDMAVHGCLPNSCTY-----NVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTF 470
Query: 236 EIFSDYYLRN 245
++ SD R+
Sbjct: 471 QMLSDLESRD 480
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 116/285 (40%), Gaps = 13/285 (4%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+++ M + P+ T++ + L++ I A ++ +EM + G D T+S + +
Sbjct: 33 SVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGY-EPDVITYSTIING 91
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN 159
+ G A + LK++E + ++ Y +I + ++E + R PN
Sbjct: 92 LCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPN 151
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
++Y +++ NL A FK+ D N+++ +KEG + A+ +
Sbjct: 152 V--VTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCV 209
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 279
E +G +PN T+ D Y M A + G PS +
Sbjct: 210 FETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG------CAPSVRSYNIL 263
Query: 280 MRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYAAAGR 323
++ + +D A+G L E+ KA+ V + L++ + GR
Sbjct: 264 IKGHCKSGRIDEAKGLLAEMSHKALTPDTV-TYSTLMKGFCQDGR 307
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 6/240 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 58
+TE E L E +N G S + ++S++ + G + ++ ++M ++MPD+ T
Sbjct: 133 ITEAMEFLSEM---VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVT 189
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+N+ + L+ I A+ V E M G V + T++ L Y ++A++ +
Sbjct: 190 FNILVDGLSKEGMILEAQCVFETMIEKG-VEPNVNTYNALMDGYCSQSQMDEAQKLFNIM 248
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ + +Y LI + ++G + E + + ++Y +++
Sbjct: 249 VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRP 308
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A+K +E S D+ ++++ K+G L+ A EL + + +PN + I
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL 368
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 7/295 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y K G + ++ EM + PD TY++ + A A +++EM+
Sbjct: 295 YNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEME 354
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
DG V FS + + + + G ++KA L+E+ D Y +I +G+ L
Sbjct: 355 ADG-VKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL 413
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ +R +++ +I A + F E N+M
Sbjct: 414 GHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIM 473
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I +E R E E + + +G PN T+ D Y R+G K AVDC+E +
Sbjct: 474 INLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAM----K 529
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
DG K PS + + Q D A ++ ++ + V LI +
Sbjct: 530 ADGLK--PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAF 582
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 118/299 (39%), Gaps = 42/299 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A LL++M+ + SS F+ ++ + G +K A+++EM AS + PD + YNV
Sbjct: 344 ESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVM 403
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N + A + M+ +G + D T++ L + + G ++A E+ N
Sbjct: 404 IDTFGKYNCLGHAMDAFDRMREEG-IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 462
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I L G+ W G E
Sbjct: 463 CPLGTTTYNIMINLLGEEQR-------WE----------------------------GVE 487
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
E + +I ++ Y + GR + A + E + G P+ + + Y
Sbjct: 488 AMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAY 547
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ G A++ + KA+ R DG + S+ + + + F +++ + A L+ +K+
Sbjct: 548 AQRGLADHALNVV-KAM---RADGLE--ASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 600
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E EA+L +MKE L + + + +L+ +Y ++G ++ I+ MKA + P Y+
Sbjct: 484 EGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHAL 543
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A A V++ M+ DG + A ++L + + E +A L+ ++
Sbjct: 544 VNAYAQRGLADHALNVVKAMRADG-LEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENG 602
Query: 123 AHRDLSAYQFLI 134
D+ Y L+
Sbjct: 603 LRPDVITYTTLM 614
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 113/282 (40%), Gaps = 29/282 (10%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKT---GHPEKI------------------ 40
+ A LL+ M + +++ +NSL+ Y + G ++I
Sbjct: 30 VDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGDGTC 89
Query: 41 ---PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSN 97
P ++ E + + P+ TY V + + + AE ++ +M+ G V + F+
Sbjct: 90 GGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQG-VGLNQIIFNT 148
Query: 98 LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RL 155
+ Y G+ + A + +E D+ Y L + L E + +
Sbjct: 149 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 208
Query: 156 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 215
PN ++Y +I + D+ A + F+E AT + NVMI YAK+G +
Sbjct: 209 VVPNY--VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIRE 266
Query: 216 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
AE ++ ++G P+ T+ + NG + +A+ E+
Sbjct: 267 AERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEE 308
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LL M+ +G + + FN+++ Y + G + I M+ + D YTYN
Sbjct: 125 EAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTL 184
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L VN + A+ ++ M G V ++ T++ L SI+ + G +A R +E+ +
Sbjct: 185 ACGLCRVNRLDEAKTLLHIMIEMG-VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 243
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
A + Y +I Y + G++ E R + + +Y +++ + A
Sbjct: 244 ATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 303
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
K F+E + ++ +I AKEGR E A +L + + G P+ +
Sbjct: 304 KLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLY 356
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 136/315 (43%), Gaps = 9/315 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
A A E M+ + ++ F SL+ YA + + ++EMKA I TY++
Sbjct: 286 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSII 345
Query: 63 MRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A +ND A+ + +E K + G + + +SN+ + ++G ++AE ++E+E
Sbjct: 346 IAGFAKINDAQSADNLFKEAKAKLGDL--NGIIYSNIIHAHCQSGNMDRAEELVREMEED 403
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ AY ++ Y + + ++ L+ + ISY +I + + + + A
Sbjct: 404 GIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKA 463
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
KE ES ++ + +++I + NA + E + G P+ + + +
Sbjct: 464 IAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEA 523
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ + G+M A+ LEK + PS+ R + F D+ A L+++++
Sbjct: 524 FCKMGNMDRAIRILEKM------QKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRR 577
Query: 302 AVDDLGVEVFEPLIR 316
+ V + LI
Sbjct: 578 SGCAPTVMTYNALIH 592
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 120/299 (40%), Gaps = 7/299 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F ++ YAK G A + M+A I P+++ + + A A D+ G +EEMK
Sbjct: 272 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMK 331
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + T+S + + + + + A+ KE + + + Y +I + Q+GN+
Sbjct: 332 AEG-IELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNM 390
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ R + + +Y +M+ ++D F+ + C T I +
Sbjct: 391 DRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCL 450
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I Y K G++ A + + G N KT+ + ++ D A E+ + +G
Sbjct: 451 INLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSG- 509
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P + F + ++D A LE ++K F P+I +A AG
Sbjct: 510 -----LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAG 563
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 36/260 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K + E++KE S + + L+ LY K G K AI +EM++ I ++ TY++
Sbjct: 426 KKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSML 485
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++D + A + EEM + G + D ++ L + + G ++A R L++++
Sbjct: 486 ISGFIHLHDFANAFSIFEEMLKSG-LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKER 544
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
A++ +I + G++ I +R
Sbjct: 545 MQPSNRAFRPIIEGFAVAGDMKRALNILDLMR---------------------------- 576
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
SGCA + N +I K+ ++E A + + G PN T+ I Y
Sbjct: 577 ------RSGCAP-TVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 629
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
NGD+ A + K + G
Sbjct: 630 AANGDIGKAFEYFTKIKEGG 649
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 110/258 (42%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A ++ E+M + L +N L+ + K G+ ++ I+++M+ + P + + +
Sbjct: 498 AFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE 557
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A D+ A +++ M+R G A T++ L ++ E+A L ++
Sbjct: 558 GFAVAGDMKRALNILDLMRRSG-CAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGIT 616
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y ++ Y G++ + + + ++ Y +++ + A
Sbjct: 617 PNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAV 676
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E + + V N++I +A+ G + A +L ++ + G PN T+ + + +
Sbjct: 677 TREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCK 736
Query: 245 NGDMKLAVDCLEKAIDTG 262
GDM+ A +E+ D G
Sbjct: 737 AGDMQRAQKVIEEMADVG 754
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A+ +M + ++ +N L+ +A+ G + ++++MK + P+ +TY +
Sbjct: 671 QSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSY 730
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A D+ A++VIEEM G + + T++ L + +A L ++A ++ +E++
Sbjct: 731 INACCKAGDMQRAQKVIEEMADVG-LKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAG 789
Query: 123 AHRDLSAYQFLIT 135
D +AY L+T
Sbjct: 790 LKPDEAAYHCLVT 802
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA K+KE L + +L+ K+G + A+ +EM I +++ YN+ +
Sbjct: 637 KAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILI 696
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A D+ A ++++MK DG V + T+++ + +AG ++A++ ++E+ +
Sbjct: 697 DGWARRGDVWEAADLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGL 755
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
+L Y LI + + + + ++LA +Y ++ L++
Sbjct: 756 KPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLS 806
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 116/278 (41%), Gaps = 9/278 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +M YA+ ++ M+ + P+ +N + AL ++ A+ + E M+
Sbjct: 136 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMR 195
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R D T+S L + + KA +E+ + + D+ Y ++ + + G +
Sbjct: 196 --DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRV 253
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E I RS+ + Y ++ L A F E E D+ V N +
Sbjct: 254 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSL 313
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
IGA+ K R++N + + + +G PN+K+ I + + G+ A D K I
Sbjct: 314 IGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKVCE 373
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
P ++T ++ F ++K+++ A+ + ++K
Sbjct: 374 -------PDADTYTMMIKMFCEKKEMETADKVWKYMRK 404
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 117/267 (43%), Gaps = 9/267 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ + E M++ S ++ L+ + K + K + +EM + +PD TY++ +
Sbjct: 186 KAQEIFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMV 244
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWT-TFSNLASIYVEAGLFEKAERALKELENRN 122
L + A ++ M D + T +S L Y E+A E+E
Sbjct: 245 DILCKAGRVDEALGIVRSM--DPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSG 302
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG 180
D++ + LI + +T + VYR+ + ++ PN+ + + + ++ L++ +
Sbjct: 303 MKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNII--LRHLIDRGEKDE 360
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F++ C D +MI + ++ +E A+++ + R++G P+ T+ + +
Sbjct: 361 AFDVFRKMIKVCEP-DADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLIN 419
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGG 267
+ + A LE+ I+ G G
Sbjct: 420 GLCEEPNTQKACVLLEEMIEMGIRPSG 446
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ ++ + K G ++ I++ M S P ++ Y+V + + A EM+
Sbjct: 240 YSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEME 299
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R G + AD F++L + + + R LKE++++ + + ++ G
Sbjct: 300 RSG-MKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEK 358
Query: 144 SEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
E + ++R + ++ P+ +Y MI++ K++ A+K +K + +V
Sbjct: 359 DEAFDVFRKMIKVCEPDAD--TYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSV 416
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+I +E + A L E G P+ T+
Sbjct: 417 LINGLCEEPNTQKACVLLEEMIEMGIRPSGATF 449
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 107/249 (42%), Gaps = 1/249 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +L+ M E+ + + + ++SLM Y+ + + M PD ++YN+ +
Sbjct: 350 EARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILI 409
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
I A+++ EM G + D +++ L + G +A K +
Sbjct: 410 NGYCKAKRIGEAKQLFNEMIHQG-LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 468
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
DL Y L+ + + G L++ +R++R+++ + + Y +I + ++L A K
Sbjct: 469 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARK 528
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F E ++++ +I KEG L+ A E G PN ++ + +L
Sbjct: 529 LFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFL 588
Query: 244 RNGDMKLAV 252
++ D AV
Sbjct: 589 QHKDESRAV 597
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 1/245 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A L KM E + +++++ K + I MKA I P+ +TYN
Sbjct: 243 TVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS 302
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ L + A ++ EM + + TFS L +I+ + G +A LK +
Sbjct: 303 LIQGLCNFSRWREASAMLNEM-MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEM 361
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ Y L+ Y + E +++ + SY +I K + A
Sbjct: 362 GVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEA 421
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ F E T DI N +I + GRL A +L + G P+ T+ I D
Sbjct: 422 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 481
Query: 242 YLRNG 246
+ + G
Sbjct: 482 FCKQG 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/290 (17%), Positives = 112/290 (38%), Gaps = 34/290 (11%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
++L K+ +L L + + FN+L+ K G + + +M A PD +TY + L
Sbjct: 178 SVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGL 237
Query: 67 AAVN-------------------DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL 107
+ D+ +I+ + +D RV FS + + + +
Sbjct: 238 CKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNI 297
Query: 108 F---------------EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
F +A L E+ + N ++ + LI ++ + GN+ E + ++
Sbjct: 298 FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKT 357
Query: 153 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
+ ++Y +++ ++ A K F + D+ N++I Y K R
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ A++L +G P+ ++ D + G ++ A D + + G
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 9/287 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A LLE M + + + + +N+L+ Y KTG +I+ M S PD T+N
Sbjct: 225 EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL 284
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + I A V+ MK+ G A + T++ L S +AG +A L E++ R
Sbjct: 285 ISGFCQKSKIDKACEVLHLMKK-GLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG 343
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI ++ + + + ++I + R P+ ISY + L+ +
Sbjct: 344 ILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPD--GISYCTLAVALLKSERFDE 401
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A A ++ N ++ RL+ A L RR G DP A T+E+
Sbjct: 402 AFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVT 461
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI-RTFMRHFEQE 286
+ G + A + L + G V SS TI T R +Q+
Sbjct: 462 GLCKAGRVDDAKEVLVMMVSEGI---QPLVSSSGTIVHTLAREGKQD 505
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 110/273 (40%), Gaps = 8/273 (2%)
Query: 53 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 112
+ +++T N +R L A ++ + + T++ L + +AG E+A
Sbjct: 66 IHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAF 125
Query: 113 RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
+ L E++ R D+ + ++ TGNLS + +R P++ + L + L
Sbjct: 126 QLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNIL--VHGL 183
Query: 173 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
L A + +E D+ N +I K R+E A +L E +R PN
Sbjct: 184 CKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNL 243
Query: 233 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
T+ Y + G LA +E+ I +G P T + + F Q+ +D A
Sbjct: 244 VTYNTLIYGYCKTGCTGLAHQLIERMIQSGTH------PDVVTFNSLISGFCQKSKIDKA 297
Query: 293 EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
L ++KK + + + LI AGR +
Sbjct: 298 CEVLHLMKKGLCAPNLVTYNVLISGLCDAGRAN 330
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 126/306 (41%), Gaps = 11/306 (3%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
S+ FN L+ K + +I+EM I+PD TYN + L + A +++E
Sbjct: 173 SVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLE 232
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
M + +V + T++ L Y + G A + ++ + H D+ + LI+ + Q
Sbjct: 233 TMVKR-KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQK 291
Query: 141 GNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+ + + ++ L PN ++Y +I L + A + E + DI
Sbjct: 292 SKIDKACEVLHLMKKGLCAPNL--VTYNVLISGLCDAGRANEACELLSEMDGRGILPDII 349
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
N +IG + + ++E A +++ RG P+ ++ + L++ A L+
Sbjct: 350 TYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNM 409
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
D G +P+ T + M + +D A L ++++ D +E L+
Sbjct: 410 FDAG------AIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGL 463
Query: 319 AAAGRT 324
AGR
Sbjct: 464 CKAGRV 469
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 17/266 (6%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A L+E+M + + FNSL++ + + +K ++ MK P+ TYNV
Sbjct: 259 TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNV 318
Query: 62 WMRALAAVNDISGAERVIEEMKRDGR-VAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A ++ EM DGR + D T+++L I+ E+A + +
Sbjct: 319 LISGLCDAGRANEACELLSEM--DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVE 376
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
R D +Y L ++ E + + ++ A PN ++ ++++ L + L
Sbjct: 377 RGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNL--FTFNSLMEGLCCSRRL 434
Query: 179 PGAEKCFKEWES-GC----ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
A GC +TY++ VT + K GR+++A+E+ G P
Sbjct: 435 DEARHLLAVMRRVGCDPAASTYEVLVTGL-----CKAGRVDDAKEVLVMMVSEGIQPLVS 489
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAI 259
+ R G LA+ ++ +
Sbjct: 490 SSGTIVHTLAREGKQDLALHYFDQVV 515
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 2/261 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +L+ +A+ G EK I ++++ + + PD Y YN M A + GA + M+
Sbjct: 241 FTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ 300
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G D +++ + Y AGL E A+ + ++ + ++ L++ Y + G +
Sbjct: 301 HMG-CEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 359
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ I + + +M+ + L E+ E G DI N++
Sbjct: 360 AKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNIL 419
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG- 262
I Y + G EEL R P+ TW Y R ++ E+ ID G
Sbjct: 420 INIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGC 479
Query: 263 RGDGGKWVPSSETIRTFMRHF 283
DGG + FM F
Sbjct: 480 YPDGGTAKNVLLKVAIFMASF 500
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 126/322 (39%), Gaps = 42/322 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAEA+ +M++ S++ +N+ + K G +K I + MK P + TY
Sbjct: 148 LLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYT 207
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A +V EM R + + TF+ L + + GL EKAE ++L+
Sbjct: 208 MLINLYGKASKSYMALKVFHEM-RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQE 266
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ AY L+ Y + G FP G
Sbjct: 267 AGLEPDVYAYNALMEAYSRAG---------------FPY--------------------G 291
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F + D N+M+ AY + G E+A+ + E +R G P K+ +
Sbjct: 292 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLS 351
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y R G + C E+ ++ G K P + + + + + + + E L ++
Sbjct: 352 AYSRAGKV---AKC-EEIVNQMHKSGIK--PDTFVLNSMLNLYGRLGQFEKMEEVLTAME 405
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
K + + LI Y AG
Sbjct: 406 KGPYPADISTYNILINIYGRAG 427
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Query: 50 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 109
SS PD YN+ + A + AE E+ + R T++ L Y +GL E
Sbjct: 92 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLEL-LEARCVPTEDTYALLLKAYCTSGLLE 150
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
KAE E+ Y I + G+ + I+ ++ + +Y +I
Sbjct: 151 KAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLI 210
Query: 170 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
+ A K F E S +I ++ A+A+EG E AEE+ E+ + G +
Sbjct: 211 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 270
Query: 230 PNAKTWEIFSDYYLRNG 246
P+ + + Y R G
Sbjct: 271 PDVYAYNALMEAYSRAG 287
>gi|414864940|tpg|DAA43497.1| TPA: hypothetical protein ZEAMMB73_100357 [Zea mays]
Length = 816
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 4/250 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA LEKMK + L +P++ +++ +AK G + +EM S + PD + Y+
Sbjct: 504 LPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYS 563
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A V ++ A MK+DG + + T +++L +Y + G +A A K L++
Sbjct: 564 ILIDAYAEVGNVQQASAYFGLMKKDG-LYENVTIYNSLIKLYTKVGYVPEARGAYKLLKS 622
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLP 179
+ + L A +I LY + E ++ SL++ AN S+ M+ + +
Sbjct: 623 LDTNAILYASNCMIDLYSDHCMVKEACEVFDSLKVR--GIANEFSHAMMVCMYKKVGRYD 680
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + KE ++ + N +I Y GR E A ++ ++ PN T++
Sbjct: 681 VAHRVCKEMQALGLLTQLLSYNSVIQMYVSGGRTEEALKIFKKMLASNTPPNDATFQALK 740
Query: 240 DYYLRNGDMK 249
+R+G K
Sbjct: 741 VILVRSGVTK 750
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 135/362 (37%), Gaps = 60/362 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +M + S + FNS++ + K EK+ ++++ M+ PD+ TYN+
Sbjct: 265 EKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTRTYNIL 324
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +DI AE +MK + V D + L Y G+ KAE LKE++ R
Sbjct: 325 IALYRESDDIDIAEYYYWKMKTENLVP-DVVSCRTLLYGYSIRGMVTKAEALLKEMDERG 383
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANISYLNMIQVLVNLKDLP 179
D L +Y G L + +R + + +ANI +V
Sbjct: 384 FMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIV------ 437
Query: 180 GAEK----CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
AEK C K+ + NVMI AY G L+ A E+ R P+ T+
Sbjct: 438 LAEKAFVCCLKK-----KMISVSACNVMIKAYGLVGMLDEACEIANGMERYDILPDYVTY 492
Query: 236 ----EIFSD--------YYL-----------------------RNGDMKLAVDCLEKAID 260
++ S YYL +NGD++++ + I
Sbjct: 493 TSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIM 552
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
+G P + + + +V A + ++KK V ++ LI+ Y
Sbjct: 553 SGVR------PDIFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYENVTIYNSLIKLYTK 606
Query: 321 AG 322
G
Sbjct: 607 VG 608
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 26/271 (9%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A + M+ ++ + + SL+ L + P+K +++MK ++ D Y+
Sbjct: 469 MLDEACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYS 528
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + + A D+ +E + EM G V D +S L Y E G ++A ++
Sbjct: 529 VVISSFAKNGDLRMSEYLFREMIMSG-VRPDIFVYSILIDAYAEVGNVQQASAYFGLMKK 587
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE---VYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ +++ Y LI LY + G + E Y++ +SL +T I Y + + D
Sbjct: 588 DGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSL-----DTNAILYASNCMI-----D 637
Query: 178 LPGAEKCFKEWESGCATYD-IRVTNV--------MIGAYAKEGRLENAEELKERARRRGA 228
L KE C +D ++V + M+ Y K GR + A + + + G
Sbjct: 638 LYSDHCMVKE---ACEVFDSLKVRGIANEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGL 694
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
++ Y+ G + A+ +K +
Sbjct: 695 LTQLLSYNSVIQMYVSGGRTEEALKIFKKML 725
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 7/206 (3%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N ++ Y G ++ I M+ I+PD TY ++ L+ A +E+MK
Sbjct: 458 NVMIKAYGLVGMLDEACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKV 517
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
++ +D +S + S + + G +E +E+ D+ Y LI Y + GN+
Sbjct: 518 -VKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQ 576
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP---GAEKCFKEWESGCATYDIRVTN 201
+ + ++ Y ++I++ + +P GA K K ++ Y +N
Sbjct: 577 QASAYFGLMKKDGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSLDTNAILY---ASN 633
Query: 202 VMIGAYAKEGRLENAEELKERARRRG 227
MI Y+ ++ A E+ + + RG
Sbjct: 634 CMIDLYSDHCMVKEACEVFDSLKVRG 659
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 99/252 (39%), Gaps = 10/252 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +M + + + +L+ + + G + +M +MPD T ++ M+A
Sbjct: 158 LWYEMHSFGVAPDNSTYGTLINVCCQGGREWTALLWLGDMCKRGLMPDEVTMSIVMQAHK 217
Query: 68 AVNDISGAERVIEEMKRD------GRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AE E D GR + T++ L Y +AG EK ++ +
Sbjct: 218 KAGEYETAEIFFERWSSDSIRRMEGRSHYNLYTYNTLIDTYGKAGHLEKVSDTFNQMLSE 277
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLP 179
+ + +I +G+ + +V + R + FP+T +Y +I + D+
Sbjct: 278 GVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTR--TYNILIALYRESDDID 335
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE + + ++ D+ ++ Y+ G + AE L + RG + T +
Sbjct: 336 IAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKAEALLKEMDERGFMVDEYTQSALT 395
Query: 240 DYYLRNGDMKLA 251
Y+ G ++ A
Sbjct: 396 RMYVNVGMLEQA 407
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 13/240 (5%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASS---IMPDSYTYNVWMRALAAVNDISGAERV 78
+ +N+L+ Y++ G I Q+M + S + PD+ T++ + A V DIS R
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQG-RE 184
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
IE A+D + L ++Y + G E A + L+NR D+ A+ +I+ Y
Sbjct: 185 IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR----DVIAWNTMISGYA 240
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+ G ++ +++ + P ++++ ++ NL+DL ++ D+
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 199 VTNVMIGAYAK-EGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
+ NV++ Y K LE A ++ ER R R + TW I Y++ G K A+D ++
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTR----DVITWNILIVAYVQYGQAKDALDIFKQ 356
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 101/243 (41%), Gaps = 15/243 (6%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
+S+ + ++ +A+ GH + + M + PD + V + ++ D+ + ++
Sbjct: 22 NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQ-LL 80
Query: 80 EEMKRDGRVAA-DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
M + R+ D + L ++Y E A + E+ + L + LI Y
Sbjct: 81 HAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKT----LVTWNALIAGYS 136
Query: 139 QTGNLSEVYRIWRSLRLAFPNTAN---ISYLNMIQVLVNLKDLP-GAEKCFKEWESGCAT 194
+ G+ +I++ + P I++ + + + D+ G E + SG A+
Sbjct: 137 RNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYAS 196
Query: 195 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 254
I V N +I Y+K G LE+A ++ +R + R + W Y + G A++
Sbjct: 197 DSI-VQNALINMYSKCGSLESARKVFDRLKNR----DVIAWNTMISGYAKQGAATQALEL 251
Query: 255 LEK 257
++
Sbjct: 252 FQR 254
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ I D+ YN AL + +S + E+MK+DG D T++ L S Y
Sbjct: 417 LLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGP-PPDIFTYNILISSY 475
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
AG + A + +ELEN N D+ +Y LI G+ G++ E + ++ ++ N
Sbjct: 476 GRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDV 535
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +I+ + A F E + + ++ N+++ + GR A +L +
Sbjct: 536 VTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAK 595
Query: 223 ARRRGADPNAKTWEIF 238
+++G P++ T+ +
Sbjct: 596 LKQQGLTPDSITYAVL 611
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 104/247 (42%), Gaps = 4/247 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+++ AL + M E + + +N+++ AK +K + +M + P+ +TY+V
Sbjct: 274 TDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSV 333
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A ++ + ++E K+ + ++ + G +A R + N
Sbjct: 334 LLNVLVAEGQLNKLDNIVEMSKK----YMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNV 389
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ D AY ++ +G ++E + T I Y + L LK +
Sbjct: 390 HDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHI 449
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+++ + DI N++I +Y + GR+++A ++ E P+ ++ +
Sbjct: 450 HDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINC 509
Query: 242 YLRNGDM 248
+NGD+
Sbjct: 510 LGKNGDV 516
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 139/327 (42%), Gaps = 15/327 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA + E MK + + + ++ + K G ++ A+ Q M + YN
Sbjct: 239 VDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNT 298
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ALA A + +M +G ++ T+S L ++ V G K + + E+ +
Sbjct: 299 MIEALAKGRMADKAVLLFSKMVENGCQPNEF-TYSVLLNVLVAEGQLNKLDNIV-EMSKK 356
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ + AY F+ TL + G+ SE +R++ ++ +Y++M++ L + + A
Sbjct: 357 YMNKQIYAY-FVRTL-SKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEA 414
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ C T D + N + A + ++ + +L E+ ++ G P+ T+ I
Sbjct: 415 IDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISS 474
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE-GFLEILK 300
Y R G + AV E+ + P + + + + DVD A F E+ +
Sbjct: 475 YGRAGRVDSAVKIFEEL------ENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQE 528
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPV 327
K ++ V + LI + G+T V
Sbjct: 529 KGLNP-DVVTYSTLIECF---GKTDKV 551
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 108 FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 167
FE+ E L ++E R +S LI +G + + W LR SY
Sbjct: 140 FEQTESLLDDMEKRGVKGSISTVNILIGFFGDLDRCVGLVKKW-GLRFN-----AYSYKC 193
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
++Q + L+D A + + + DI N+++ A AK+ +++ A ++ E +RR
Sbjct: 194 LLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRH 253
Query: 228 ADPNAKTWEI 237
+P+ T+ I
Sbjct: 254 CEPDTFTYTI 263
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 2/245 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F +L+ +A+ G EK I ++++ + + PD Y YN M A + GA + M+
Sbjct: 349 FTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ 408
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G D +++ + Y AGL E A+ + ++ + ++ L++ Y + G +
Sbjct: 409 HMG-CEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKV 467
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ I + + +M+ + L E+ E G DI N++
Sbjct: 468 AKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNIL 527
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG- 262
I Y + G EEL R P+ TW Y R ++ E+ ID G
Sbjct: 528 INIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGC 587
Query: 263 RGDGG 267
DGG
Sbjct: 588 YPDGG 592
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 126/322 (39%), Gaps = 42/322 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAEA+ +M++ S++ +N+ + K G +K I + MK P + TY
Sbjct: 256 LLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYT 315
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A +V EM R + + TF+ L + + GL EKAE ++L+
Sbjct: 316 MLINLYGKASKSYMALKVFHEM-RSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQE 374
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ AY L+ Y + G FP G
Sbjct: 375 AGLEPDVYAYNALMEAYSRAG---------------FPY--------------------G 399
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F + D N+M+ AY + G E+A+ + E +R G P K+ +
Sbjct: 400 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLS 459
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y R G + C E+ ++ G K P + + + + + + + E L ++
Sbjct: 460 AYSRAGKV---AKC-EEIVNQMHKSGIK--PDTFVLNSMLNLYGRLGQFEKMEEVLTAME 513
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
K + + LI Y AG
Sbjct: 514 KGPYPADISTYNILINIYGRAG 535
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Query: 50 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 109
SS PD YN+ + A + AE E+ + R T++ L Y +GL E
Sbjct: 200 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLEL-LEARCVPTEDTYALLLKAYCTSGLLE 258
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
KAE E+ Y I + G+ + I+ ++ + +Y +I
Sbjct: 259 KAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLI 318
Query: 170 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
+ A K F E S +I ++ A+A+EG E AEE+ E+ + G +
Sbjct: 319 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 378
Query: 230 PNAKTWEIFSDYYLRNG 246
P+ + + Y R G
Sbjct: 379 PDVYAYNALMEAYSRAG 395
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + EKM + +++ F L+ + K G E + + +EM+ + PD+ TYN
Sbjct: 203 EDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAI 262
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A ++ EM+ G + D T++ L Y + + A + +
Sbjct: 263 VNGLCRARDLKSASGIVVEMRSAG-LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 321
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + G ++ R+ + A N +Y +I D+
Sbjct: 322 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGL 381
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ KE ++ + NV++ + K G+++NA+ L G P+ T+ I D +
Sbjct: 382 RLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGH 441
Query: 243 LRNG 246
++G
Sbjct: 442 CKHG 445
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 109/262 (41%), Gaps = 1/262 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + ++M+ + + + FN++++ + G + + + M + + PD YTY ++
Sbjct: 135 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 194
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L V I A V E+M G + + F+ L + + G E +E+ R
Sbjct: 195 GLCRVGRIEDARGVFEKMCGRG-MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVR 253
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y ++ + +L I +R A ++Y +I ++L A +
Sbjct: 254 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI 313
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ + D +I +K GR +AE + G +P+ T+ + D + R
Sbjct: 314 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCR 373
Query: 245 NGDMKLAVDCLEKAIDTGRGDG 266
GD+K + L++ + GR G
Sbjct: 374 KGDVKTGLRLLKEMQNKGRKPG 395
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 49/292 (16%)
Query: 37 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 96
PE +Q + A + P++ +NV MR L + +++ A+ V +EM+ G V +F+
Sbjct: 98 PEACAFYLQLLDAG-LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG-VRRTVVSFN 155
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
+ S AG + AE HR +S + G +VY
Sbjct: 156 TMISGMCRAGDLDGAE---------TLHRRMS----------EAGVTPDVY--------- 187
Query: 157 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
+Y +IQ L + + A F++ + V ++I A+ K+G E
Sbjct: 188 -------TYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETM 240
Query: 217 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 276
EL R RG P+A T+ + R D+K A + + G P + T
Sbjct: 241 LELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG------LRPDTVTY 294
Query: 277 RTFMRHFEQEKDVDGAEGFLEILKKAV-DDLGVE--VFEPLIRTYAAAGRTS 325
T + + +E+++D A +EI + V + +G++ + LI + AGR++
Sbjct: 295 TTLIDGYCKEEELDMA---MEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 343
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 1/245 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L +M + L + + F +L+ + TG + I Q+M + PD TYN
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L V D+ A++++ EM + G + D T++ L + G E A KE+
Sbjct: 372 INGLCKVGDLREAKKLVIEMTQRG-LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D A+ LI+ + + G + E R R + A + +Y +I D+
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGF 490
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K KE + + NV++ K+G+++NA L + G P+ T+ I + +
Sbjct: 491 KLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGH 550
Query: 243 LRNGD 247
++G+
Sbjct: 551 CKHGN 555
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 125/305 (40%), Gaps = 11/305 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ L ++ + L + + FN+L+ Y K+G+ ++ + + M + + PD +TY+V +
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + A ++ EM G V D TF+ L + + G + +++ +
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPND-VTFTTLINGHCVTGRADLGMEIYQQMLRKGV 361
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y LI + G+L E ++ + +Y +I DL A +
Sbjct: 362 KPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALE 421
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
KE D +I + +EG++ AE G P+ T+ + +
Sbjct: 422 IRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFC 481
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ GD+K L++ + DG VP T + ++ + A L+ A+
Sbjct: 482 KKGDVKTGFKLLKEM----QCDG--HVPGVVTYNVLLNGLCKQGQMKNANMLLD----AM 531
Query: 304 DDLGV 308
+LGV
Sbjct: 532 LNLGV 536
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 5/223 (2%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
A +E+ PD +NV M L + I+ A+ + E+ + G + +F+ L +
Sbjct: 211 AFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG-LRPTVVSFNTLING 269
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN 159
Y ++G ++ R + + D+ Y LI + G L + +++ + R PN
Sbjct: 270 YCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN 329
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ L + DL G E + G D+ N +I K G L A++L
Sbjct: 330 DVTFTTLINGHCVTGRADL-GMEIYQQMLRKG-VKPDVITYNTLINGLCKVGDLREAKKL 387
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+RG P+ T+ + D + GD++ A++ ++ + G
Sbjct: 388 VIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 115/247 (46%), Gaps = 5/247 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L KMKE ++ FN+L+ Y G E+ +++ ++ + P+ TYN+
Sbjct: 100 KEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNIL 159
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+RA ++ A ++ +M G + D T++ LA Y E G +AE + E+ NR
Sbjct: 160 VRAWCNKENMEEAWNMVYKMVASG-MQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRR 218
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYR-IWRSLRLA-FPNTANISYLNMIQVLVNLKDLPG 180
+ ++ Y + GN+ + R ++R L PN + ++I+ ++ D G
Sbjct: 219 VTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNL--FVFNSLIKGFLDTMDTEG 276
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ E D+ + ++ A++ GR++ +E+ + +P+ + I +
Sbjct: 277 VDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAK 336
Query: 241 YYLRNGD 247
Y+R G+
Sbjct: 337 GYVRAGE 343
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 124/298 (41%), Gaps = 9/298 (3%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
LM + G P + +I + P TY + AL R+I +++ +G
Sbjct: 19 LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
+ D F+++ + + E+G ++A + ++++ S + LI YG G E
Sbjct: 79 -MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEA 137
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA-EKCFKEWESGCATYDIRVTNVMIG 205
++ L+ +Y +++ N +++ A +K SG D N +
Sbjct: 138 LKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQP-DAVTYNTLAR 196
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AYA++G AEE+ R PN +T I + Y + G+M A + + + G
Sbjct: 197 AYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGV-- 254
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+P+ + ++ F D +G + L ++++ V F ++ +++AGR
Sbjct: 255 ----LPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGR 308
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 125/300 (41%), Gaps = 7/300 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+A LLE +++ + + +N L+ + + E+ ++ +M AS + PD+ TYN
Sbjct: 134 TEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNT 193
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
RA A + AE +I EM + RV + T S + + Y + G A R + ++
Sbjct: 194 LARAYAEKGETIRAEEMILEM-LNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKEL 252
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+L + LI + T + V + + +++ ++ + +
Sbjct: 253 GVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKC 312
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ F + DI +++ Y + G E AE + R+ G PN
Sbjct: 313 KEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISG 372
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ G M+ A+ EK + G P+ +T T + + + K AE L+++++
Sbjct: 373 WCSAGKMEHAMKVYEKMCEIGVS------PNLKTYETLIWGYGEAKQPLKAEELLQVMEE 426
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F+ L Y + G PEK +I+ M+ + P+ + + + A +V E+M
Sbjct: 331 FSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMC 390
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V+ + T+ L Y EA KAE L+ +E + Q + + G L
Sbjct: 391 EIG-VSPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGTMQLIADAWRAIGLL 449
Query: 144 SE 145
SE
Sbjct: 450 SE 451
>gi|302780277|ref|XP_002971913.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
gi|300160212|gb|EFJ26830.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
Length = 570
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E L +++K + + N +M + ++IP + +E K+ + PD +YN+++
Sbjct: 220 EKLFKELKHRSWYTEASGLNQMMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGF 279
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE----NR 121
+ SG E V + ++ D D +T LA Y+ G F+KA +AL ELE +
Sbjct: 280 HCKEKNASGLEEVYQMLQEDPNARPDESTLLILACGYISVGCFDKAGKALVELEEGLDSG 339
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
R + Y L+ LYG T + V IW S+ + P A SY I + + A
Sbjct: 340 LFRRKQATYNKLLRLYGDTKDKEGVENIW-SILSSRPLKAVDSYSYAIAAFGKAEGVHKA 398
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ F + + T + M+ Y G + A EL ++ R+ ++
Sbjct: 399 EEIFAKVDGLLETNQV---IAMLSVYTHYGYADKARELFQKLPRKRMKHRLVVYKYLIAG 455
Query: 242 YLRNGDMKLAV 252
YLR G++K A+
Sbjct: 456 YLREGEVKKAL 466
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 1/253 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + + M L S +N ++ A+ G E ++ +EMKA + PD TYN +
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
V ++GA V EEMK D D T+++L + + + +A L ++ R
Sbjct: 295 GYGKVGMLTGAVSVFEEMK-DAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQ 353
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y LI + + G L E + + + +Y ++I + DL A K
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E + +I ++ ++GR+ AEEL + G N + + Y++
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473
Query: 245 NGDMKLAVDCLEK 257
M+ A+D LE+
Sbjct: 474 AKMMEKAMDILEE 486
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 1/229 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A +L E+MK L + +NSL+ Y K G ++ +EMK + PD TYN
Sbjct: 268 EAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSL 327
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ I A + MK+ G + + T+S L + +AG+ +A + ++
Sbjct: 328 INCFCKFERIPQAFEYLHGMKQRG-LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG 386
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + G+L+E +++ ++ A N ++Y ++ L + AE
Sbjct: 387 LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAE 446
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
+ F T + ++ + Y K +E A ++ E ++ P+
Sbjct: 447 ELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPD 495
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 121/302 (40%), Gaps = 9/302 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A KM + + N L+ +K+ + ++M + + P +TYN
Sbjct: 196 MLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYN 255
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + LA D+ A + EEMK G + D T+++L Y + G+ A +E+++
Sbjct: 256 MVIGCLAREGDLEAARSLFEEMKAKG-LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD 314
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI + + + + + ++ ++Y +I L
Sbjct: 315 AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLE 374
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A K F + G + T+ +I A K G L A +L+ ++ G + N T+
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTS-LIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALL 433
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
D +G M+ A + + G W + + + + + K ++ A LE +
Sbjct: 434 DGLCEDGRMREAEELFGALLKAG------WTLNQQIYTSLFHGYIKAKMMEKAMDILEEM 487
Query: 300 KK 301
K
Sbjct: 488 NK 489
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 102/269 (37%), Gaps = 7/269 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL Y K EK I++EM ++ PD Y + L N+I + VI EM
Sbjct: 464 YTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM 523
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A + ++ L Y + G +A L+E+++ + Y LI + G +
Sbjct: 524 DCGLTANSY-IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLV 582
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ R + + + Y +I L L A+ F E + D V +
Sbjct: 583 QQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSL 642
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I K G A L+ R G + + + + R G ++LA L++ + G
Sbjct: 643 IDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKG- 701
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+P +R + + D++ A
Sbjct: 702 -----IIPDQVLCICLLRKYYELGDINEA 725
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 7/255 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M EKA +LE+M + NL + + + + + E A+I+EM + +SY Y
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A V + A +++EM+ G + T+ L + GL ++A R +
Sbjct: 536 TLIDAYFKVGKTTEAVNLLQEMQDLG-IKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTR 594
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL-P 179
++ Y LI + L E ++ + + + Y ++I N+K P
Sbjct: 595 NGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLID--GNMKHGNP 652
Query: 180 GAEKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
G + E G D+ +I +++ G+++ A+ L + R+G P+
Sbjct: 653 GEALSLRNRMVEIG-MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCIC 711
Query: 238 FSDYYLRNGDMKLAV 252
Y GD+ A+
Sbjct: 712 LLRKYYELGDINEAL 726
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
FK+ + + N++IG A+EG LE A L E + +G P+ T+ D Y +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
G + AV E+ D G P T + + F + + + A +L +K+
Sbjct: 299 VGMLTGAVSVFEEMKDAG------CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352
Query: 305 DLGVEVFEPLIRTYAAAG 322
V + LI + AG
Sbjct: 353 QPNVVTYSTLIDAFCKAG 370
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 3/263 (1%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMR 64
E +L +M L + + + +NS++ Y K E++ + +M + + PD +T N ++
Sbjct: 215 EHVLAEMSYLGIKCNCVTYNSIIDGYGKASMFEQMDDALNDMIENGNSHPDVFTLNSFVG 274
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A I E+ +E + G + D TTF+ + Y +AG++EK + + +E R
Sbjct: 275 AYGNAGQIDKMEKWYDEFQLMG-IKPDITTFNTMIKSYGKAGMYEKMKTVMDFMEKRFFT 333
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y +I ++G+ G + ++ + + ++ +I+Y +++ + + +
Sbjct: 334 PTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSI 393
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ E+ D N +I AY + G L+ EL R R +P+ T+ Y
Sbjct: 394 MRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFACMIQSYNT 453
Query: 245 NGDMKLAVDCLEKAIDTGRGDGG 267
G M AV LE + + + G
Sbjct: 454 QG-MTEAVQNLENMMISAKSSLG 475
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/300 (18%), Positives = 113/300 (37%), Gaps = 7/300 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ L+ + K PE+ + + M + + P Y + A + A +E+MK
Sbjct: 127 YAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAFSTVEDMK 186
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
D T+S L + F+ E L E+ + Y +I YG+
Sbjct: 187 SVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMF 246
Query: 144 SEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
++ + + ++ LN + N + EK + E++ DI N
Sbjct: 247 EQMDDALNDMIENGNSHPDVFTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITTFNT 306
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
MI +Y K G E + + + +R P T+ + + + G+ ++ +++
Sbjct: 307 MIKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVFGKAGE----IEKMDQHFLKM 362
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ G K P+S T + + + + +D + + ++ + L F +I Y AG
Sbjct: 363 KHLGVK--PNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAG 420
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK + KMK L + +S+ + SL++ Y+K G +K+ +I++ ++ S ++ D+ +N
Sbjct: 353 EKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCI 412
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A ++ + M R+ + D TF+ + Y G+ E A++ LEN
Sbjct: 413 ISAYGQAGNLKKMGELFLAM-RERKCEPDNITFACMIQSYNTQGMTE----AVQNLEN 465
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 155/377 (41%), Gaps = 48/377 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ LL +MKE L ++ + L+ YA++ + + EMK I D T N+
Sbjct: 147 KEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMM 206
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF-------------- 108
+ + + AE + M + + + T++ + +Y EA L
Sbjct: 207 IDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKG 266
Query: 109 ----------------------EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
EKA R +++++ R + Y LI++YG+TG
Sbjct: 267 GVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRA 326
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
++++LR I Y +MI V + A++ +E + DI + I
Sbjct: 327 AFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQP----DIVPRDTAISI 382
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
AK +LE A +L R+ G + T++ ++RN K A+D E ++G
Sbjct: 383 LAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESG---- 438
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG--RT 324
++P SET + + Q + ++ AE +++ L EV +++ Y A R
Sbjct: 439 --FLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIRE 496
Query: 325 SPVMLRRLKMEKVEVSE 341
+ M LK+E ++ E
Sbjct: 497 AEDMFAALKLEGLDGDE 513
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+ +M E +L F++L++ Y + E +QEM+A I PD ++
Sbjct: 42 ELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTL 101
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V D S A + ++K G +A D ++++ ++Y +A +++A+ L E++
Sbjct: 102 IELAGKVKDYSKATSLFSKLKASG-IAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAG 160
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D +Y LI Y ++ E +++ ++ + MI V L+ + AE
Sbjct: 161 LMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAE 220
Query: 183 KCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGA-DPNAKTW 235
+ F VT N MI Y + L A + + +G +PN T+
Sbjct: 221 ELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITY 275
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 4/203 (1%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
P + YNV ++ + AE ++ EM V D TFS L S Y A E A
Sbjct: 23 PSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVP-DKFTFSTLISGYGRANRLEDAMG 81
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
L+E+E DL + LI L G+ + S+ ++ L+ + + Y +MI +
Sbjct: 82 WLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYG 141
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
K A+ E + D ++I AYA+ + A+++ + +G +
Sbjct: 142 KAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVT 201
Query: 234 TWEIFSDYYLRNGDMKLAVDCLE 256
T + D Y G +++ D E
Sbjct: 202 TCNMMIDVY---GKLEMVRDAEE 221
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 18/306 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA L M E FN+++ + K+ EK + + ++ D+ TYNV
Sbjct: 141 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSADTVTYNVI 199
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A V++EM G + + TT++ + + AG +A E++ RN
Sbjct: 200 VNGWCLIKRTPKALEVLKEMVDRG-INPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRN 258
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y ++ +G G + ++ + P+ A +Y IQVL +
Sbjct: 259 CEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVA--TYNAFIQVLCKKDSVEN 316
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+E ++ NV+I G+ EEL +R G +PN +T+ +
Sbjct: 317 AVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIR 376
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT-----FMRHFEQEKDVDGAEGF 295
YY +++ A+ EK G GD +P+ +T F+R ++ V G + F
Sbjct: 377 YYSECSEVEKALGLFEK---MGTGD---CLPNLDTYNILISGMFVRKRSEDMVVAGNQAF 430
Query: 296 L-EILK 300
EIL+
Sbjct: 431 AKEILR 436
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 104/242 (42%), Gaps = 7/242 (2%)
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R R+ TF+ +A Y +G +KA + + +DL+++ ++ + ++ +
Sbjct: 116 RSLRIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 175
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ Y ++R+LR F + ++Y ++ +K P A + KE ++ N M
Sbjct: 176 EKAYELFRALRGRF-SADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTM 234
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ + + G++ A E ++R + + T+ + G++K + ++ I G
Sbjct: 235 LQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREG- 293
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+PS T F++ ++ V+ A E + + + V + LIR AG+
Sbjct: 294 -----VLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGK 348
Query: 324 TS 325
S
Sbjct: 349 FS 350
>gi|414864941|tpg|DAA43498.1| TPA: hypothetical protein ZEAMMB73_100357 [Zea mays]
Length = 788
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 4/250 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA LEKMK + L +P++ +++ +AK G + +EM S + PD + Y+
Sbjct: 504 LPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYS 563
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A A V ++ A MK+DG + + T +++L +Y + G +A A K L++
Sbjct: 564 ILIDAYAEVGNVQQASAYFGLMKKDG-LYENVTIYNSLIKLYTKVGYVPEARGAYKLLKS 622
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLP 179
+ + L A +I LY + E ++ SL++ AN S+ M+ + +
Sbjct: 623 LDTNAILYASNCMIDLYSDHCMVKEACEVFDSLKVR--GIANEFSHAMMVCMYKKVGRYD 680
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + KE ++ + N +I Y GR E A ++ ++ PN T++
Sbjct: 681 VAHRVCKEMQALGLLTQLLSYNSVIQMYVSGGRTEEALKIFKKMLASNTPPNDATFQALK 740
Query: 240 DYYLRNGDMK 249
+R+G K
Sbjct: 741 VILVRSGVTK 750
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 135/362 (37%), Gaps = 60/362 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +M + S + FNS++ + K EK+ ++++ M+ PD+ TYN+
Sbjct: 265 EKVSDTFNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTRTYNIL 324
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +DI AE +MK + V D + L Y G+ KAE LKE++ R
Sbjct: 325 IALYRESDDIDIAEYYYWKMKTENLVP-DVVSCRTLLYGYSIRGMVTKAEALLKEMDERG 383
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN---TANISYLNMIQVLVNLKDLP 179
D L +Y G L + +R + + +ANI +V
Sbjct: 384 FMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIV------ 437
Query: 180 GAEK----CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
AEK C K+ + NVMI AY G L+ A E+ R P+ T+
Sbjct: 438 LAEKAFVCCLKK-----KMISVSACNVMIKAYGLVGMLDEACEIANGMERYDILPDYVTY 492
Query: 236 ----EIFSD--------YYL-----------------------RNGDMKLAVDCLEKAID 260
++ S YYL +NGD++++ + I
Sbjct: 493 TSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIM 552
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
+G P + + + +V A + ++KK V ++ LI+ Y
Sbjct: 553 SGVR------PDIFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYENVTIYNSLIKLYTK 606
Query: 321 AG 322
G
Sbjct: 607 VG 608
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 26/271 (9%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A + M+ ++ + + SL+ L + P+K +++MK ++ D Y+
Sbjct: 469 MLDEACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKVVKLLSDCIPYS 528
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + + A D+ +E + EM G V D +S L Y E G ++A ++
Sbjct: 529 VVISSFAKNGDLRMSEYLFREMIMSG-VRPDIFVYSILIDAYAEVGNVQQASAYFGLMKK 587
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE---VYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ +++ Y LI LY + G + E Y++ +SL +T I Y + + D
Sbjct: 588 DGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSL-----DTNAILYASNCMI-----D 637
Query: 178 LPGAEKCFKEWESGCATYD-IRVTNV--------MIGAYAKEGRLENAEELKERARRRGA 228
L KE C +D ++V + M+ Y K GR + A + + + G
Sbjct: 638 LYSDHCMVKE---ACEVFDSLKVRGIANEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGL 694
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
++ Y+ G + A+ +K +
Sbjct: 695 LTQLLSYNSVIQMYVSGGRTEEALKIFKKML 725
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 1/203 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N ++ Y G ++ I M+ I+PD TY ++ L+ A +E+MK
Sbjct: 458 NVMIKAYGLVGMLDEACEIANGMERYDILPDYVTYTSLIQLLSTAKLPKKAIYYLEKMKV 517
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
++ +D +S + S + + G +E +E+ D+ Y LI Y + GN+
Sbjct: 518 -VKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQ 576
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
+ + ++ Y ++I++ + +P A +K +S + +N MI
Sbjct: 577 QASAYFGLMKKDGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSLDTNAILYASNCMI 636
Query: 205 GAYAKEGRLENAEELKERARRRG 227
Y+ ++ A E+ + + RG
Sbjct: 637 DLYSDHCMVKEACEVFDSLKVRG 659
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 99/252 (39%), Gaps = 10/252 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +M + + + +L+ + + G + +M +MPD T ++ M+A
Sbjct: 158 LWYEMHSFGVAPDNSTYGTLINVCCQGGREWTALLWLGDMCKRGLMPDEVTMSIVMQAHK 217
Query: 68 AVNDISGAERVIEEMKRD------GRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AE E D GR + T++ L Y +AG EK ++ +
Sbjct: 218 KAGEYETAEIFFERWSSDSIRRMEGRSHYNLYTYNTLIDTYGKAGHLEKVSDTFNQMLSE 277
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLP 179
+ + +I +G+ + +V + R + FP+T +Y +I + D+
Sbjct: 278 GVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTR--TYNILIALYRESDDID 335
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE + + ++ D+ ++ Y+ G + AE L + RG + T +
Sbjct: 336 IAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKAEALLKEMDERGFMVDEYTQSALT 395
Query: 240 DYYLRNGDMKLA 251
Y+ G ++ A
Sbjct: 396 RMYVNVGMLEQA 407
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 39/286 (13%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTG--HPEKIPAIIQEMKASSIMPDSYTYNV 61
KA+ LL+ M++ + FN+L+ K+G P + ++ ++ S + PD+ TYN
Sbjct: 243 KAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNT 302
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-- 119
+ A + +++ GA +V E+M+ R D T++ + S+Y GL +AER ELE
Sbjct: 303 LLSACSRDSNLEGAVKVFEDMEAH-RCQPDLWTYNAMISVYGRCGLAAEAERLFIELELK 361
Query: 120 ------------------NRNAH---------------RDLSAYQFLITLYGQTGNLSEV 146
RN +D Y +I +YG+ G L
Sbjct: 362 GFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 147 YRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++++ ++ L+ N I+Y +I L A E ++ + +I
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
YAK G+ E AE+ R G P+ + + D LR + + A
Sbjct: 482 GYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE--E 81
+N++M +Y+++G K ++ M+ +PD ++N + A ++ V+E +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLT-PNLVVELLD 286
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M R+ + D T++ L S E A + +++E DL Y +I++YG+ G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+E R++ L L + ++Y +++ ++ ++ +++ + D N
Sbjct: 347 LAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 202 VMIGAYAKEGRLENAEEL-KERARRRGADPNAKTWEIFSD 240
+I Y K+G+L+ A +L K+ G +P+A T+ + D
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLID 446
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 149/349 (42%), Gaps = 12/349 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMP-FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A ++ + + F+ P + ++ Y K +K +++ ++ S PD T+N
Sbjct: 733 ETAYQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNS 792
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A A A + M RDG + L ++ V+ G E+ ++EL++
Sbjct: 793 LMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVD-GRLEELYVVVEELQDM 851
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
S+ ++ + + GN+ EV +I+ S++ A Y MI++L K + A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E E E ++ + N M+ Y + ++ +R + G +P+ T+
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIM 971
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILK 300
Y R+ + +++ + G P +T ++ + F ++K ++ AE F E+L
Sbjct: 972 YCRDRRPEEGYSLMQQMRNLGLD------PKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
K + L + +++ +G S +L+ +K +E + A+ LL
Sbjct: 1026 KGL-KLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K + +++KE L +N+L+ +Y + PE+ +++Q+M+ + P TY
Sbjct: 944 KKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSL 1003
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + AE++ EE+ G + D + + + I ++G KAE+ L+ ++N
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
L+ L+ Y +GN E ++ +L+ + Y ++I + KD
Sbjct: 1063 IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKD 1117
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTYN 60
TEK + + ++M+++ G M +N+++ +Y K G + + ++MK S PD+ TY
Sbjct: 383 TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT 442
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + +L N A ++ EM G + T+S L Y +AG E+AE +
Sbjct: 443 VLIDSLGKANRSVEAAALMSEMLDVG-IKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D AY ++ + + + + ++R + ++ Y MI L+
Sbjct: 502 SGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDD 561
Query: 181 AEKCFKEWESGCATYDIRVTNVMI 204
+K ++ E C + +++V++
Sbjct: 562 VQKTIRDMEELCGMNPLEISSVLV 585
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE ++ +M+E N +NS++ +Y +K + Q +K S + PD TYN +
Sbjct: 911 AEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLII 970
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
++++M+ G + T+ +L S + + E+AE+ +EL ++
Sbjct: 971 MYCRDRRPEEGYSLMQQMRNLG-LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLK 1029
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG-AEK 183
D S Y ++ + +G+ S+ ++ + ++ A ++ ++++ V + P AEK
Sbjct: 1030 LDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIE-PTLATMHLLMVSYSSSGNPQEAEK 1088
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ + +I AY + ++ E ++ G +P+ + W F
Sbjct: 1089 VLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCF 1143
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 14 ELNL-GFS--SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
EL L GFS ++ +NSL+ +A+ + EK+ + Q+M+ D TYN +
Sbjct: 357 ELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQG 416
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
+ A ++ ++MK D T++ L +A +A + E+ + L Y
Sbjct: 417 QLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTY 476
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
LI Y + G E + + + N++Y M+ VL+ + A +++ S
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMIS 536
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEE 218
T + +MI KE R ++ ++
Sbjct: 537 DGHTPSHSLYELMILGLMKENRSDDVQK 564
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 22/178 (12%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL+ MK + + + LM Y+ +G+P++ ++ +K + + + Y+ +
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVI 1109
Query: 64 RALAAVNDI-SGAERVIEEMKRDGRVAAD---WTTFSNLASIYVEAGLFEKAERALKELE 119
A D SG ER++ EMK++G + D WT F AS E +AL+++
Sbjct: 1110 DAYLRSKDYKSGIERLL-EMKKEG-LEPDHRIWTCFVRAASFSKEKSEVMLLLKALQDI- 1166
Query: 120 NRNAHRDLSAYQFLITLYGQTGNL--SEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 175
+ I L G L SEV + L+ N A LN L+NL
Sbjct: 1167 ---------GFDIPIRLLGGRPELLVSEVDGCFEKLKSIEDNAA----LNFANALLNL 1211
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 116/309 (37%), Gaps = 15/309 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ L+ YA+ G A + M+AS I P+ + Y + A A D+ GA EEM
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + F ++ S Y AG E AE ++ + N Y ++ Y Q GN+
Sbjct: 194 SQG-IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 252
Query: 144 SEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE--SGCATYDIRVT 200
V + + F + Y ++ ++D EKC + C T
Sbjct: 253 ETVEALLAQMEEEGFQGNLGL-YTTVLNGFAEIRD---EEKCLSFFHRLKACGLSPTAAT 308
Query: 201 -NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
++ + K G + A ++ E + G PN + + D Y R GD A E +
Sbjct: 309 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 368
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
G P T + F + +D A G LE ++ +E + ++ Y
Sbjct: 369 SAG------LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYV 422
Query: 320 AAGRTSPVM 328
G +
Sbjct: 423 KGGHIQKAL 431
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA +LE ++ L + + S++ Y K GH +K + +K + + P +YN
Sbjct: 393 DKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSL 452
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ LA + A +++EM +G V + +++ L Y AG EKA + ++ N
Sbjct: 453 LSGLAKARQMENARLMLDEMLANG-VVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN 511
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ AY L+ ++G + +++ + A I+Y M+ +L A
Sbjct: 512 LAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKAR 571
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K+ + D I A + G E E R + + NA+T+ +
Sbjct: 572 DLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 631
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
L D A+ C E+A +G
Sbjct: 632 LAAADPDQAISCYEQAKASG 651
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 146/353 (41%), Gaps = 12/353 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A A E+M + + F S+++ YA G+ E ++ KA +++P YN
Sbjct: 183 EGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSI 242
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++A ++ E ++ +M+ +G + ++ + + + E EK L+
Sbjct: 243 VQAYCQAGNMETVEALLAQMEEEG-FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 301
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y ++ L+ + GN+++ I + + + Y ++ D A
Sbjct: 302 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 361
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K +++ S DI N+++ A+ K GR++ A + E + P +T+ D Y
Sbjct: 362 KVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGY 421
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKK 301
++ G ++ A++ ++ G P + + + + + ++ A L E+L
Sbjct: 422 VKGGHIQKALEVFDRIKTAG------LRPGVVSYNSLLSGLAKARQMENARLMLDEMLAN 475
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVS-EASKKLLEAIC 351
V + L YA AG M +R+K E + + A LL+A C
Sbjct: 476 GVVP-NERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACC 527
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/317 (17%), Positives = 125/317 (39%), Gaps = 7/317 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A E M+ ++ + + SL+ YA+ E A +EM + I + + +
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 209
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A+ + AE E+ K + V ++++ Y +AG E E L ++E
Sbjct: 210 GYASAGNNEAAEHWFEKFKAENLVPGG-IVYNSIVQAYCQAGNMETVEALLAQMEEEGFQ 268
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+L Y ++ + + + + + L+ + +Y ++++ ++ A
Sbjct: 269 GNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDI 328
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E + + + + +++ YA+ G A ++ E G P+ T+ I + +
Sbjct: 329 LEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCK 388
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
G M A+ LE + +P+ ET + + + + + A + +K A
Sbjct: 389 AGRMDKALGVLENI------QANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGL 442
Query: 305 DLGVEVFEPLIRTYAAA 321
GV + L+ A A
Sbjct: 443 RPGVVSYNSLLSGLAKA 459
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 1/259 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + FN+LM Y K G ++ + M+AS + PD YTY+V +
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + EM +G V + TF+ L + + G + A +++ N+
Sbjct: 215 GLCKESRMDEANGLFGEMLDNGLV-PNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ Y LI + G+L + + + I+Y +I DL A +
Sbjct: 274 PDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFEL 333
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ D V +I +EGR +AE++ R G P+ +T+ + + + +
Sbjct: 334 RERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCK 393
Query: 245 NGDMKLAVDCLEKAIDTGR 263
GD+K A + L + GR
Sbjct: 394 KGDVKKASELLREMQRNGR 412
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L +M + L + + F +L+ + K G + I ++M PD TYN
Sbjct: 223 DEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG----LFEKAERALKE 117
+ L D+ A +++EM R G + D T++ L + G FE ER +KE
Sbjct: 283 IYGLCKKGDLKQARYLLDEMSRKG-LKPDKITYTTLIDGSCKEGDLETAFELRERMIKE 340
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L E+M + ++ + + +L+ + G +++EM + PD TY +
Sbjct: 328 ETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMI 387
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAA 90
M D+ A ++ EM+R+GRV
Sbjct: 388 MNEFCKKGDVKKASELLREMQRNGRVPC 415
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 9/251 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ +++ + L S + FN+LM Y + G ++ + M S I PD YTY+V +
Sbjct: 155 AQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + ++ A + +EM +G V + TF+ L + + G + A A KE+ +
Sbjct: 215 GLCKESKMNDANELFDEMIGNGLVP-NGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + I+Y +I DL A K
Sbjct: 274 PDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFK- 332
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ +IR+ +V +I +EG+ AE++ G P+ T+ + +
Sbjct: 333 ---YKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIIN 389
Query: 241 YYLRNGDMKLA 251
+ + GD+K+
Sbjct: 390 EFCKKGDVKMG 400
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 41/81 (50%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
++M + N+ + + +L++ + G +++EM + + PD+ TY + +
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394
Query: 70 NDISGAERVIEEMKRDGRVAA 90
D+ ++++EM+RDG V
Sbjct: 395 GDVKMGSKLLKEMQRDGHVPC 415
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 139/382 (36%), Gaps = 62/382 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +LL M E N S +N+L++ K + ++ ++ E +S +PD TY++
Sbjct: 313 ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSIL 372
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L I A +++EM G + T++ L +A EKA L+ L +
Sbjct: 373 ADGLCKRGRIDEAFELVKEMSGKG-CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y ++ + G L + ++ + + I+Y +++ L + A
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491
Query: 183 KCFKEWESGCATYD--------------------------------IRVTNVMIGAYAKE 210
FKE S T D I V N ++ Y KE
Sbjct: 492 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 551
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG------ 264
GRL+ + E RG PN KT+ I D ++G + A LE G
Sbjct: 552 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611
Query: 265 ----DG-------------------GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
DG P + T T M F +E+ D A G L+ + K
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 671
Query: 302 AVDDLGVEVFEPLIRTYAAAGR 323
A D + LI + R
Sbjct: 672 AGVDPDNVTYNTLISGLSQTNR 693
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 2/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+LM Y K G ++IP + ++M +P+ TYN+ M L + A +E M
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V D +++ + +A ++A + L ++ D Y L+ + +
Sbjct: 601 SAGCV-PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 659
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTNV 202
+ I +++ A + N++Y +I L L A + E +GC N
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 719
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+I KEG L+ A L + G + N T+ IF D + G
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 763
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++M + + ++ +N+LM + K + I++ M + + PD+ TYN
Sbjct: 625 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 684
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L+ N + A ++ EM R+G V + TT++ + + G ++A + +
Sbjct: 685 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG 744
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y I + G L E + + +SY +I L + L A
Sbjct: 745 VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRAS 801
Query: 183 KCFKEW---ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
K +E + C T N++I A+ K RL+ A L +RG P+ T+ +
Sbjct: 802 KLAREMVAVKGLCITS--HTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNM 857
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 116/304 (38%), Gaps = 55/304 (18%)
Query: 18 GFSSMPF--NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
GF F N + + G ++IPA+ + M + PDSYTY++ +++L +N I
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQI--- 176
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
+KA L + + R ++S Y L
Sbjct: 177 ---------------------------------DKAFTMLDKAKVRGFKPEVSVYTILTR 203
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
+ +TG L + I+R++ P+ I+Y +I D GA + KE
Sbjct: 204 AFCKTGRLKDALEIFRNI----PSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAP 259
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D+ N++I K + + A E+ RG P+ T+ D + G + A L
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLL 319
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
A+ R PS T T + ++++VD A K VD+ F P +
Sbjct: 320 --AVMAER----NCRPSCCTYNTLISGLCKQQNVDRA-------KDLVDEFVSSGFVPDV 366
Query: 316 RTYA 319
TY+
Sbjct: 367 VTYS 370
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 123/323 (38%), Gaps = 47/323 (14%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+KA +L +M + + ++ FNS+M K G E+ +++ M + P TYN
Sbjct: 277 TDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNT 336
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L ++ A+ +++E G V D T+S LA + G ++A +KE+ +
Sbjct: 337 LISGLCKQQNVDRAKDLVDEFVSSGFV-PDVVTYSILADGLCKRGRIDEAFELVKEMSGK 395
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+L Y LI + + Y + S LV+ +P
Sbjct: 396 GCTPNLVTYNTLIDGLCKASKTEKAYELLES-------------------LVSSGFVP-- 434
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
D+ +++ KEGRL+ A ++ E +RG P+ T+ +
Sbjct: 435 --------------DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 480
Query: 242 YLRNGDMKLAVDCLEKAIDT-GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
R G + A ++ + D +V R E +K VDG G I
Sbjct: 481 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI-- 538
Query: 301 KAVDDLGVEVFEPLIRTYAAAGR 323
+V+ L+ Y GR
Sbjct: 539 --------DVYNALMDGYCKEGR 553
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 113/241 (46%), Gaps = 5/241 (2%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
E+MKE ++ + + FNSL++ K ++ ++++EM+ + MPD YTY++ L
Sbjct: 270 ERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRC 329
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
+D +GA + E+ G ++T S L + + G EKAE LK+ D
Sbjct: 330 DDGNGAMELYEQATEKGIRINNYTG-SILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 130 YQFLITLYGQTGNLSE-VYRIWRSLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y + Y + G++++ + I R PN+ I++ ++I ++K++ AE+ K+
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNS--ITFNSLIDKFCDMKEMDKAEEWVKK 446
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
T + N +I Y K + ++ E+ G PN ++ + ++G
Sbjct: 447 MAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGK 506
Query: 248 M 248
+
Sbjct: 507 I 507
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 123/291 (42%), Gaps = 10/291 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++ +LE+M+E+ + + + + SL+ K G + ++++M ++P++ YN+
Sbjct: 473 DRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNML 532
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V + A R +EM R ++ T++ L + G +AE L ++ +
Sbjct: 533 IDGSCMVGKVKDALRFFDEMMR-SEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y LI+ Y GN+S+ ++ +++ L T +Y +I + + +
Sbjct: 592 HSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVR-TYHPLISG-CSKEGIELV 649
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK + E D V N MI YA+ G + A L + +G P+ T+
Sbjct: 650 EKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILG 709
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+ R G + D + + P ++T ++ KD GA
Sbjct: 710 HFREGKLSNIKDLVNNM------KAKELAPKADTYDILVKGHCDLKDFSGA 754
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 123/281 (43%), Gaps = 17/281 (6%)
Query: 44 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 103
+ M+ + P+ + YNV + L I AE++ +EM V + T++ L Y
Sbjct: 199 LDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGS-IVTYNTLIDGYC 257
Query: 104 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 163
+ G + A + + ++ ++ ++ + L++ + + E + + + +
Sbjct: 258 KVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGY 317
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTN----VMIGAYAKEGRLENAEE 218
+Y + L+ D GA + +++ E G IR+ N +++ K+G++E AEE
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKG-----IRINNYTGSILLNGLCKQGKVEKAEE 372
Query: 219 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 278
+ ++ G + + F + Y R GDM A+ +E+ G P+S T +
Sbjct: 373 ILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG------LRPNSITFNS 426
Query: 279 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
+ F K++D AE +++ + + VE + LI Y
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYG 467
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +NSL++ YA G+ K + + MK I P TY+ + + I E++ E
Sbjct: 597 ITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNE 655
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M + + D ++ + Y E G +KA + + ++ H D Y LI + + G
Sbjct: 656 MLQ-MNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREG 714
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
LS + + +++ +Y +++ +LKD GA ++E + + N
Sbjct: 715 KLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICN 774
Query: 202 VMIGAYAKEGRLENAEELKERARRRG 227
+ +EGRL+ + + +G
Sbjct: 775 ELTAGLEQEGRLQEVQVICSEMNVKG 800
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+KA +L + M + + M +NSL+ + + G I ++ MKA + P + TY++
Sbjct: 681 TQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDI 740
Query: 62 WMRALAAVNDISGA 75
++ + D SGA
Sbjct: 741 LVKGHCDLKDFSGA 754
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 1/153 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E E L +M ++NL + +N+++ YA+ G+ +K ++ Q M I PD TYN
Sbjct: 647 ELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSL 706
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +S + ++ MK +A T+ L + + F A +E+ N
Sbjct: 707 ILGHFREGKLSNIKDLVNNMKAK-ELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENN 765
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 155
+ S L Q G L EV I + +
Sbjct: 766 FLPNASICNELTAGLEQEGRLQEVQVICSEMNV 798
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 130/321 (40%), Gaps = 8/321 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA LE+M+ + + +NSL+ Y E +I + + PD +Y
Sbjct: 283 EKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTV 342
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L I + ++E+M +D + D T++ L + + G + A LKE E++
Sbjct: 343 MGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKG 402
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
H D Y ++ + Q G + E + + N ++Y ++ L + A+
Sbjct: 403 FHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAK 462
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K ++ ++ GC + T ++ G G+ A E+ + PNA T+ +
Sbjct: 463 KMLQQMYKHGCKPNTVSYTALLNG-LCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHG 521
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ R G + A D + ++ G + P+ I ++ Q + V A+ +LE
Sbjct: 522 FRREGKLSEACDLTREMVEKG------FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLN 575
Query: 302 AVDDLGVEVFEPLIRTYAAAG 322
+ V F +I + G
Sbjct: 576 KGCAINVVNFTTVIHGFCQIG 596
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 11/228 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ LE+ + + F +++ + + G E +++++M S+ PD+ TY
Sbjct: 565 EAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALF 624
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
AL + A +I +M G + TF ++ Y + G + L + R
Sbjct: 625 DALGKKGRLDEAAELIVKMLSKG-LDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKP 683
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVL---VNLKDLP 179
R + Y +I GNL E ++ + LR A AN ++ M L V L
Sbjct: 684 FRTI--YNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYK 741
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
A + F+ T D+++ + +G L A++L R RG
Sbjct: 742 VACQMFRRN----LTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERG 785
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 5/225 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ + + G+ + + EMK + MP+ YTY + + AL I+ A V EM
Sbjct: 249 YTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEML 308
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + TF+NL ++V+AG EK + +++ D Y FLI + + GNL
Sbjct: 309 DVG-CEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNL 367
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E ++ S+ + PN + ++ + + L+D+ GA + + + + + N
Sbjct: 368 DEALKVLNSMVKKGCSPNAS--TFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYN 425
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+++ + + +LK+ +PN T+ + Y G
Sbjct: 426 ILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMG 470
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 135/327 (41%), Gaps = 16/327 (4%)
Query: 18 GFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
GF+ P +N ++ L K + + +I MKA ++ T+++ +R S A
Sbjct: 137 GFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEA 196
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
M+ D D FS L SI +A+ L+++ D+ Y L+
Sbjct: 197 VHAFNRME-DYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVR 254
Query: 136 LYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGC 192
+ + GN+ E R++ +++A PN +Y +I L + A F E + GC
Sbjct: 255 GWCRAGNIPEAERVFTEMKVAGCMPNV--YTYTIVIDALCRCGQITRAHDVFAEMLDVGC 312
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
I N ++ + K GR E ++ + +R G P+ T+ + + ++G++ A+
Sbjct: 313 EPNSITFNN-LLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEAL 371
Query: 253 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 312
L + G P++ T + +DV+GA +K+ +
Sbjct: 372 KVLNSMVKKGCS------PNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYN 425
Query: 313 PLIRTYAAAGRTSPVMLRRLKMEKVEV 339
L+R + T V+ + +M++ +V
Sbjct: 426 ILMRMFVDTKSTDMVLKLKKEMDEDDV 452
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEK + +MK + ++ +N L+ + K G+ ++ ++ M P++ T+N
Sbjct: 332 TEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNG 391
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++A + D++GA R+ +MK + + A+ T++ L ++V+ + + KE++
Sbjct: 392 LFGSIAKLRDVNGAHRLYAKMK-ELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDED 450
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ +++ Y LI +Y G+ + Y+ +R +
Sbjct: 451 DVEPNVNTYCVLIAMYCGMGHWNNAYKFFREM 482
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 1/235 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A + E+MK + + +N+L+ +Y K+ P++ ++ EM + P TYN
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + A + +M G D T++ L S + AG E A +E+ N
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + I +YG G +E+ +I+ + + + +++ ++ V
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
FKE + + N +I AY++ G E A + R G P+ T+
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K +L+EKMK + + +N+L+T + ++ + +EMKA+ D TYN +
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ A +V+ EM +G + T+++L S Y G+ ++A ++ +
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y L++ + + G + I+ +R A ++ I++ N K
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F E + DI N ++ + + G + + +R G P +T+ Y
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 244 RNGDMKLAVDCLEKAIDTG 262
R G + A+ + +D G
Sbjct: 501 RCGSFEQAMTVYRRMLDAG 519
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 137/335 (40%), Gaps = 42/335 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + ++MK FN+L++ Y++ G E+ + + M + + PD TYN
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY---------------VEA 105
+ ALA +E+V+ EM+ DGR + T+ +L Y V +
Sbjct: 529 TVLAALARGGMWEQSEKVLAEME-DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 106 GLFE--------------------KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G+ E +AERA EL+ R D++ ++++YG+ +++
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+ ++ + +Y +++ + D +E+ +E + DI N +I
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AY + R+ +A + R G P+ T+ F Y + + A+ + I G
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG--- 764
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
P+ T + + + + D A+ F+E L+
Sbjct: 765 ---CRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 127/322 (39%), Gaps = 14/322 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + ++E + SL++ +A +G + + ++M+ P TYNV +
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 65 ALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ N I+ ++E+MK DG +A D T++ L + L ++A + +E++
Sbjct: 252 VFGKMGTPWNKITS---LVEKMKSDG-IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y L+ +YG++ E ++ + L + + ++Y ++I L
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + + D+ ++ + + G++E+A + E R G PN T+ F
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y G + ++ G P T T + F Q G + +K
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCG------LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
+A E F LI Y+ G
Sbjct: 482 RAGFVPERETFNTLISAYSRCG 503
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KA +L+ MKE S +NSLM +++++ K I++E+ A I PD +YN
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ EM+ G + D T++ Y +FE+A ++ +
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRNSG-IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+ + Y ++ Y + E LR P+ L +++ +V
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIV 815
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 15/293 (5%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
++++ K G + ++ D Y+Y + A A A V ++M+ DG
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 87 RVAADWTTFSNLASIYVEAGL-FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
T++ + +++ + G + K ++++++ D Y LIT + E
Sbjct: 239 -CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+++ ++ A + ++Y ++ V A K E + I N +I
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AYA++G L+ A ELK + +G P+ T+ + R G ++ A+ E+ R
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM----RNA 413
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
G K P+ T F++ + G G + K D++ V P I T+
Sbjct: 414 GCK--PNICTFNAFIKMY-------GNRGKFTEMMKIFDEINVCGLSPDIVTW 457
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 125/339 (36%), Gaps = 43/339 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A L +M E + +L++ + + G E +I +EM+ + P+ T+N
Sbjct: 364 MLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFN 423
Query: 61 VWMR-------------------------------ALAAVNDISGAER----VIEEMKRD 85
+++ L AV +G + V +EMKR
Sbjct: 424 AFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G V + TF+ L S Y G FE+A + + + DLS Y ++ + G +
Sbjct: 484 GFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++ + ++Y +++ N K++ +E SG + ++
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
+K L AE + RG P+ T Y R + A L+ + G
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG--- 659
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAV 303
+ PS T + M + D +E L EIL K +
Sbjct: 660 ---FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 1/237 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL +++ L + +N+L++ ++ + E+ + +M+A PD +TYN +
Sbjct: 269 LLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYG 328
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AE++ +E++ G D T+++L + G +K + E+ RD
Sbjct: 329 RCGFSGKAEQLFKELESKGYFP-DAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDE 387
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +YG+ G +++R ++L+ I+Y +I L + A E
Sbjct: 388 MTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSE 447
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ +R + +I YA+ G+ AEE + RR G P+ + + D +LR
Sbjct: 448 MLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLR 504
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 121/300 (40%), Gaps = 53/300 (17%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM--RALAAVNDISGAERVIEE 81
+N++M +YA+TG K+ ++ M+ PD ++N + R A + A ++ E
Sbjct: 213 YNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNE 272
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
++R G + D T++ L S E+A + ++E DL Y +I++YG+ G
Sbjct: 273 VRRSG-LRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCG 331
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+ AE+ FKE ES D N
Sbjct: 332 FSGK-----------------------------------AEQLFKELESKGYFPDAVTYN 356
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
++ A+A+EG ++ +E+ + G + T+ Y + G LA+ +
Sbjct: 357 SLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLS 416
Query: 262 GRGDGGKWVPSSETIRTFMRHF-EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
GR P + T + + K V+ A E+L ++GV +P +RTY+A
Sbjct: 417 GR------TPDAITYTVLIDSLGKANKMVEAANVMSEML-----NIGV---KPTLRTYSA 462
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 2/230 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE L ++++ ++ +NSL+ +A+ G+ +K+ I EM + D TYN +
Sbjct: 335 KAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTII 394
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A ++ +MK GR D T++ L +A +A + E+ N
Sbjct: 395 HMYGKQGQHGLALQLYRDMKLSGRT-PDAITYTVLIDSLGKANKMVEAANVMSEMLNIGV 453
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
L Y LI Y + G E + +R + ++Y M+ V + + A
Sbjct: 454 KPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMM 513
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE-LKERARRRGADPNA 232
++E T D V M+ +E ++E+ + +++ G +P A
Sbjct: 514 LYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQA 563
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + +++KE L +N+L+ +Y + PE+ +++ EM+ + P TY +
Sbjct: 928 KTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLI 987
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A + AE + EE+ G D + + + IY +G KAE+ L +++
Sbjct: 988 AAFGKQQLVVDAEELFEELLSKGS-KLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGV 1046
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
++ L+ YG +G E ++ +L+ + + + Y ++I + KD
Sbjct: 1047 EPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKD 1100
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 2/238 (0%)
Query: 19 FSSMPFNSLMT-LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
F +M +M L K + A++ EM+ + PD +N +R ++D +
Sbjct: 872 FPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQ 931
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
+ + +K DG + D T++ L +Y E+ + E+ L Y+ LI +
Sbjct: 932 IYQRIKEDG-LQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAF 990
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
G+ + + ++ L Y M+++ N + AEK + I
Sbjct: 991 GKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTI 1050
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
++++ +Y G+ + AE++ + G + + D YL+N D + + L
Sbjct: 1051 ATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKL 1108
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
EA++ +M+E +NS++ LY K I Q +K + PD TYN +
Sbjct: 895 EAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVM 954
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
+ ++ EM+R G + T+ +L + + + L AE +EL ++ +
Sbjct: 955 YCRDHRPEEGCSLMHEMRRIG-LEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKL 1013
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG-AEKC 184
D S Y ++ +Y +GN S+ ++ ++ A I+ ++++ V P AEK
Sbjct: 1014 DRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVE-PTIATMHLLMVSYGSSGQPQEAEKV 1072
Query: 185 FKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
E G + + ++V I AY K + ++ G +P+ + W F
Sbjct: 1073 LTNLKEMGLSLSTLPYSSV-IDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCF 1126
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+K + + +M ++ M +N+++ +Y K G + ++MK S PD+ TY V
Sbjct: 368 VDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTV 427
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L N + A V+ EM G V T+S L Y AG +AE +
Sbjct: 428 LIDSLGKANKMVEAANVMSEMLNIG-VKPTLRTYSALICGYARAGQRLEAEETFDCMRRS 486
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D AY ++ ++ + ++ ++R +
Sbjct: 487 GIRPDQLAYSVMLDVFLRFDEATKAMMLYREM 518
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 93/233 (39%), Gaps = 3/233 (1%)
Query: 16 NLGFSSMPFNSLMTL--YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
++GF + L+ L +A+ + + I Q MKA+ P + Y + + L +
Sbjct: 833 DMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVR 892
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
E ++ EM+ G D + ++++ +Y F K + + ++ D Y L
Sbjct: 893 DVEAMVTEMEEAG-FRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTL 951
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 193
I +Y + E + +R +Y ++I + + AE+ F+E S +
Sbjct: 952 IVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGS 1011
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
D ++M+ Y G AE+L + G +P T + Y +G
Sbjct: 1012 KLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSG 1064
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 141/380 (37%), Gaps = 61/380 (16%)
Query: 19 FSSMPFN----------SLMTLYAKTGHPE------------------------------ 38
FS M FN S++ +Y K G PE
Sbjct: 687 FSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYG 746
Query: 39 ------KIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 92
K +++ ++ D +N ++A AA A V M RDG +
Sbjct: 747 KLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGP-SPTV 805
Query: 93 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
+ + L + G E+ +E+++ S+ ++ + + N++E +I++
Sbjct: 806 DSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQG 865
Query: 153 LRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
++ A FP T ++ Y MI +L K + E E E D+ + N M+ Y
Sbjct: 866 MKAAGYFP-TMHL-YRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGI 923
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
++ +R + G P+ T+ Y R+ + + + G
Sbjct: 924 DDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIG------LE 977
Query: 271 PSSETIRTFMRHF-EQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV-- 327
P +T ++ + F +Q+ VD E F E+L K L + +++ Y +G S
Sbjct: 978 PKLDTYKSLIAAFGKQQLVVDAEELFEELLSKG-SKLDRSFYHIMMKIYRNSGNHSKAEK 1036
Query: 328 MLRRLKMEKVEVSEASKKLL 347
+L +K VE + A+ LL
Sbjct: 1037 LLSMMKDAGVEPTIATMHLL 1056
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM--KLAVDC 254
++V N M+G YA+ GR + + + R RG +P+ ++ + L+ G M +A++
Sbjct: 210 VQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIEL 269
Query: 255 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 314
L + +G P T T + +E +++ A K DD+ +P
Sbjct: 270 LNEVRRSG------LRPDIITYNTLISACSRESNLEEA-------VKVFDDMEAHYCQPD 316
Query: 315 IRTYAA 320
+ TY A
Sbjct: 317 LWTYNA 322
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 3/237 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ LL M + + + + +++LM Y G I M + + P +YN+
Sbjct: 359 KEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIM 418
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A ++ EM V + T+++L ++G A +KEL +R
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHK-NVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y L+ + NL + ++ ++ +Y +I L L A+
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQ 537
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K F+ GC D+ NVMIG KEG L+ A +K + G P+A T+EI
Sbjct: 538 KLFQHILVKGCCI-DVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 93/228 (40%), Gaps = 5/228 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++L+ + G +++ EM +I PD YTY + + AL + A+ ++ M
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
++G V + T+S L Y G A++ + + + +Y +I + ++
Sbjct: 370 KEG-VKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E + R + + PNT ++Y ++I L + A KE D+
Sbjct: 429 DEAMNLLREMLHKNVVPNT--VTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYT 486
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
++ K L+ A L + + RG PN T+ D + +K
Sbjct: 487 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLK 534
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 1/207 (0%)
Query: 46 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
EM + I PD TY+ + + GA ++ EM + D T++ L +
Sbjct: 297 EMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK-NINPDVYTYTILIDALCKE 355
Query: 106 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 165
G ++A+ L + ++ Y L+ Y G + +I+ ++ N + SY
Sbjct: 356 GKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSY 415
Query: 166 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
MI L K + A +E + N +I K GR+ +A +L +
Sbjct: 416 NIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHH 475
Query: 226 RGADPNAKTWEIFSDYYLRNGDMKLAV 252
RG + T+ D +N ++ A+
Sbjct: 476 RGQPADVITYTSLLDGLCKNQNLDKAI 502
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 91/240 (37%), Gaps = 1/240 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ K G +++ ++ S PD YN + L ++ A EM
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D T+S L + AG A L E+ +N + D+ Y LI + G L
Sbjct: 300 SRG-IFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKL 358
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + + ++Y ++ + ++ A++ F + N+M
Sbjct: 359 KEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIM 418
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I K ++ A L + PN T+ D ++G + A+D +++ G+
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQ 478
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 141/313 (45%), Gaps = 22/313 (7%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ L +M++ + + ++ ++ + +G + ++QEM I PD T++ +
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------LFEKAERALKE 117
AL D++ A+ +++EM G V + T + L ++G +F+ ++++ +
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSG-VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD 289
Query: 118 LENRNAHR----DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 171
++ +A D+ Y LI+ G E ++ + R P+T ++Y +MI
Sbjct: 290 IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT--VTYSSMING 347
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
L L A + F S + +I N +I Y K G +++ EL RRG N
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
A T+ + + G++ ++D ++ I +G P + TIR + ++++
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSG------VYPDTITIRNMLTGLWSKEELKK 461
Query: 292 AEGFLEILKKAVD 304
A LE L+ ++D
Sbjct: 462 ALAMLEELQMSMD 474
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 135/315 (42%), Gaps = 20/315 (6%)
Query: 2 TEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
T A LL KM+EL ++ + +++++ K G + EM+ I PD TY+
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + S A+R+++EM +++ D TFS L + V+ G A+ L+E+ +
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVR-KISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-----------MI 169
++ L+ +G L + ++++++ + + N +I
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310
Query: 170 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
L+N AE+ ++E D + MI K+ RL+ A ++ + +
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370
Query: 230 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 289
PN T+ Y + G + D LE + GR V ++ T T +R F + ++
Sbjct: 371 PNIVTFNTLITGYCKAG---MVDDGLELFCEMGR---RGIVANAITYITLIRGFRKVGNI 424
Query: 290 DGA-EGFLEILKKAV 303
+G+ + F E++ V
Sbjct: 425 NGSLDIFQEMISSGV 439
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A + + M + + + FN+L+T Y K G + + EM I+ ++ TY
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE--RALKELEN 120
+R V +I+G+ + +EM G V D T N+ + GL+ K E +AL LE
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSG-VYPDTITIRNMLT-----GLWSKEELKKALAMLEE 468
Query: 121 RNAHRD 126
D
Sbjct: 469 LQMSMD 474
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 12/298 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA LE+M+ + + + + +N L+ Y E +I EM PD +Y
Sbjct: 221 DKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTV 280
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L I ++E+M +D + D T++ + + G ++A L+E E R
Sbjct: 281 MGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERR 340
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y ++ + + G + + I + + P+ ++Y ++I L + +
Sbjct: 341 FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV--VTYTSVINGLCQERKVDQ 398
Query: 181 AEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A+K ++ ++ GC + T ++ G K G A E+ + PNA T+ +
Sbjct: 399 AKKMLRQMYKHGCKPNTVSYTALLNG-LCKNGNSLEAREMMNMSEEXWWIPNAITYSVLM 457
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ R G A D + + I G + P+ I ++ QE+ VD A+ F+E
Sbjct: 458 HGFRREGKSSEACDLVREMIKKG------FFPTPVEINLLIQSLCQEEKVDEAKRFME 509
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 17/233 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A+ +E+ + + F +++ + + E +++ +M S+ PD TY
Sbjct: 501 VDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTT 560
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL I A ++ +M R G + T+ + Y G E + L+++ +R
Sbjct: 561 IIDALGKKGRIEEATKLAMKMLRVGWIPTP-VTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R +AY +I GNL + Y++ + LR A AN ++ +I+ ++ K +P
Sbjct: 620 QECR--TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHM-LIESYLS-KGIP- 674
Query: 181 AEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+ C + D+++ + EG+ E A++L R RG
Sbjct: 675 ----LMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 723
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 127/321 (39%), Gaps = 21/321 (6%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A LL KM++ + + + +N ++ K G + + EM I D +TYN
Sbjct: 177 TRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNS 236
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ GA R++ EM V D TF+ L + G+ +A + R
Sbjct: 237 LIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKR 296
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
D+ + L+ + G +SE ++ + R PN ISY +I +K +
Sbjct: 297 GLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNV--ISYSTLINGYCKVKMVD 354
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + E D N ++ +K GR+ +L E R G P+ T+ +
Sbjct: 355 EALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLL 414
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG--AEGFLE 297
D YL+ + A+ + +DTG S IRT+ +DG G ++
Sbjct: 415 DDYLKRECLDKALALFQHIVDTG---------ISPNIRTY------NILIDGLCKGGRMK 459
Query: 298 ILKKAVDDLGVEVFEPLIRTY 318
K+ L V+ P IRTY
Sbjct: 460 AAKEIFQLLSVKGCRPNIRTY 480
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN L+ K G + + M + PD + N M +S A+ V + M
Sbjct: 270 FNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMV 329
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G++ + ++S L + Y + + ++A R L E+ RN D Y L+ ++G +
Sbjct: 330 ERGKLP-NVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + ++R + I+Y ++ + + L A F+ + +IR N++
Sbjct: 389 LYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNIL 448
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
I K GR++ A+E+ + +G PN +T+ I + R G
Sbjct: 449 IDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 95/234 (40%), Gaps = 36/234 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+A+ + ++M E + + +++L+ Y K ++ ++ EM +++PD+ TYN
Sbjct: 319 SEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCL 378
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L+ + ++E M+ G+ A D T++ L Y++ +KA + + +
Sbjct: 379 LDGLSKSGRVLYEWDLVEAMRASGQ-APDLITYNVLLDDYLKRECLDKALALFQHIVDTG 437
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ Y LI + G + I++ L +
Sbjct: 438 ISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSV--------------------------- 470
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
GC +IR N+MI +EG L+ AE L G PNA T++
Sbjct: 471 -------KGCRP-NIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFD 516
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 117/250 (46%), Gaps = 2/250 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNV 61
++A + +KMKE ++ +N+L+ + G P + +++ M + ++ P+ TYN+
Sbjct: 109 DEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNI 168
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++A + A V+ +M G + D T++ +A Y + G E+AER + ++
Sbjct: 169 LIQAWCTKKKLEEAWNVLHKMVASG-IQPDVVTYNTMARAYAQNGETERAERLILKMPYN 227
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ +I+ Y + GN+ E R ++ + + + ++I+ ++ D G
Sbjct: 228 IVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGV 287
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ E D+ + ++ A++ G +EN EE+ + G +P+ + I +
Sbjct: 288 DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKG 347
Query: 242 YLRNGDMKLA 251
Y+R G + A
Sbjct: 348 YVRAGQPRKA 357
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/322 (18%), Positives = 127/322 (39%), Gaps = 8/322 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+A+A+ + E + + + +L+ + + IPA++ ++ + + PDS N
Sbjct: 39 HEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAM 98
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-ENR 121
+ A + + A ++ ++MK G +T++ L + AG ++ + L+ + ++
Sbjct: 99 INAFSESGKVDEAMKIFQKMKEYG-CKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDE 157
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N + Y LI + L E + + + + ++Y M + + A
Sbjct: 158 NVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERA 217
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ + + R ++I Y KEG + A R + G DPN +
Sbjct: 218 ERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKG 277
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
YL D + +++A+ G K P T T M + ++ E + K
Sbjct: 278 YLDTTD----TNGVDEALTLMEEFGIK--PDVVTFSTIMNAWSSAGLMENCEEIFNDMVK 331
Query: 302 AVDDLGVEVFEPLIRTYAAAGR 323
A + + + L + Y AG+
Sbjct: 332 AGIEPDIHAYSILAKGYVRAGQ 353
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 36/233 (15%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +MKEL + + + FNSL+ Y T + + M+ I PD T++ M A +
Sbjct: 255 FLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWS 314
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ + E + +M + G + D +S LA YV AG KAE L + ++
Sbjct: 315 SAGLMENCEEIFNDMVKAG-IEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNV 373
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ +I+ + G + +R+ C K
Sbjct: 374 VIFTTIISGWCAAGKMDRAFRL----------------------------------CEKM 399
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E G + +++ +I Y + + AEEL RG P T ++ +D
Sbjct: 400 HEMGTSP-NLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVAD 451
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 87/237 (36%), Gaps = 36/237 (15%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+AE L+ KM + + +++ Y K G+ + + MK + P+ +N
Sbjct: 214 TERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNS 273
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ D +G + + M+ G + D TFS + + + AGL E E ++
Sbjct: 274 LIKGYLDTTDTNGVDEALTLMEEFG-IKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKA 332
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ AY L Y + G P A +M + V
Sbjct: 333 GIEPDIHAYSILAKGYVRAGQ---------------PRKAEALLTSMSKYGVQ------- 370
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ + +I + G+++ A L E+ G PN KT+E
Sbjct: 371 -------------PNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETL 414
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T + L M+E + + F+++M ++ G E I +M + I PD + Y++
Sbjct: 284 TNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSI 343
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AE ++ M + G V + F+ + S + AG ++A R +++
Sbjct: 344 LAKGYVRAGQPRKAEALLTSMSKYG-VQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEM 402
Query: 122 NAHRDLSAYQFLITLYGQ 139
+L Y+ LI YG+
Sbjct: 403 GTSPNLKTYETLIWGYGE 420
>gi|242078465|ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
gi|241940351|gb|EES13496.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
Length = 824
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 12/316 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
A++ E+ + +S YN+ + L + AE+V+E R G D +S L
Sbjct: 285 AVLHEIIQERVAVESIAYNMVIDGLCKEMKLEEAEKVLEIKTRHGS-TPDLYGYSYLIRT 343
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
Y + G KA ++ + + + +L+ + G +SEV ++ R +
Sbjct: 344 YCKTGNLGKAWHHIEAMVSHGIEINCYIVGYLLQCLKKLGMVSEVIVYFQKFRDLGLHLD 403
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+ Y + L ++ A K E +G D +I Y +G ENA ++ E
Sbjct: 404 GVLYNITMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFE 463
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
+ + P+ T+ I + Y RNG + D LE +D G P+S T +
Sbjct: 464 QMLKANIKPDVVTYNILASGYSRNGAVIKVYDLLEHMVDQGLE------PNSLTYGVAIA 517
Query: 282 HFEQEKDVDGAEGFLEIL-KKAVDDLGVEVFEPLIRTYAAAGRTS---PVMLRRLKMEKV 337
F +E ++ AE IL +K +D++ V ++ ++ Y +G T + LR K +
Sbjct: 518 CFCREGNLSEAEVLFNILEEKGIDNIEV-LYSSMVCGYLYSGWTDHAYTLFLRVAKQGNM 576
Query: 338 EVSEASKKLLEAICVE 353
+ + KL+ ++C++
Sbjct: 577 VDNLSCSKLINSLCID 592
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 102/276 (36%), Gaps = 23/276 (8%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + +K ++L L + +N M Y K G+ + ++ EM A ++PD Y
Sbjct: 384 MVSEVIVYFQKFRDLGLHLDGVLYNITMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYT 443
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A +V E+M + + D T++ LAS Y G K L+ + +
Sbjct: 444 CLINGYCLKGETENAWQVFEQMLK-ANIKPDVVTYNILASGYSRNGAVIKVYDLLEHMVD 502
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + Y I + + GNLSE ++ L + + Y +M+
Sbjct: 503 QGLEPNSLTYGVAIACFCREGNLSEAEVLFNILEEKGIDNIEVLYSSMV----------- 551
Query: 181 AEKCFKEWESGCATYDIRV-----------TNVMIGAYAKEGRLENAEELKERARRRGAD 229
+ W T +RV + +I + + ++E A + + A
Sbjct: 552 CGYLYSGWTDHAYTLFLRVAKQGNMVDNLSCSKLINSLCIDKKVEEASTVCSMMLEKNAV 611
Query: 230 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
P+ ++ Y + DM A +D G D
Sbjct: 612 PDVISYSKLISAYCQKRDMHNAHLWFLDMVDRGLSD 647
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 106/246 (43%), Gaps = 8/246 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A + E+M + N+ + +N L + Y++ G K+ +++ M + P+S TY V
Sbjct: 455 TENAWQVFEQMLKANIKPDVVTYNILASGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGV 514
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ++S AE + ++ G + +S++ Y+ +G + A + +
Sbjct: 515 AIACFCREGNLSEAEVLFNILEEKG-IDNIEVLYSSMVCGYLYSGWTDHAYTLFLRVAKQ 573
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
D + LI + E + + + A P+ ISY +I +D+
Sbjct: 574 GNMVDNLSCSKLINSLCIDKKVEEASTVCSMMLEKNAVPDV--ISYSKLISAYCQKRDMH 631
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A F + + G + D+ V V++ Y K GRL+ A +L + G P+ + +
Sbjct: 632 NAHLWFLDMVDRGLS--DVIVYTVLMNGYCKVGRLQEACDLFVQMINLGIKPDVVAYTVL 689
Query: 239 SDYYLR 244
D +++
Sbjct: 690 LDGHIK 695
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + LL MK++ + + L+ + KT + ++ + EM A + PD Y Y +
Sbjct: 717 KHKTLLSSMKDMEIEPDVTCYTVLIDGHCKTEYLDEARGLFDEMLAKGLTPDVYAYTALI 776
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 98
+ +I+ AE +++EM +G + D TFS L
Sbjct: 777 NGYCSQGEIAKAEDLLQEMTDNG-MKPDVLTFSVL 810
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ G + + EM ++ PD TY + + A+ ++ A ++++EM
Sbjct: 262 YNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMV 318
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T ++++ ++ + G A R ++++ R D + Y +++ + G+L
Sbjct: 319 AGG-VEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDL 377
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
R + ++ T ++Y MI L +L AEK +E + D V+
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVL 437
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I Y K G++ A ++ +RG PN T+ +D + GD++ A + L + + G
Sbjct: 438 IDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 11/265 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE LL++M L + + L+ Y K G + + M + P+ TY
Sbjct: 413 EEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTAL 472
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L D+ A ++ EM G + + T+++L + +AG E+A R + +++
Sbjct: 473 TDGLCKQGDVQAANELLHEMSNKG-LELNACTYNSLINGLCKAGYLEQAMRTMADMDTAC 531
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y LI ++G+L + + + + ++Y ++ + G +
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 591
Query: 183 KCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
K K ATY N ++ Y E +++ E+ + R R PN T+ I
Sbjct: 592 KLLDWMLEKNIHPNAATY-----NSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNI 646
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTG 262
+ + +MK A+ ++ I G
Sbjct: 647 LIKGHCKARNMKEALYFHDEMIQKG 671
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 93/241 (38%), Gaps = 1/241 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++M+ L + + +++ + E+ ++QEM A + D TY V +
Sbjct: 384 FDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCK 443
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
++ A ++ M + G V + T++ L + G + A L E+ N+ +
Sbjct: 444 RGKMAEAFQMHNAMVQRG-VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNAC 502
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
Y LI + G L + R + A +Y +I L DL A +E
Sbjct: 503 TYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEM 562
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
I NV++ + GR+E ++L + + PNA T+ Y +M
Sbjct: 563 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNM 622
Query: 249 K 249
K
Sbjct: 623 K 623
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 27/254 (10%)
Query: 46 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
EM+ + D TY + L ++ AE++++EM R+ D T++ L Y +
Sbjct: 386 EMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWAR-RLDVDEVTYTVLIDGYCKR 444
Query: 106 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 165
G +A + + R ++ Y L + G++ + + +Y
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTY 504
Query: 166 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
++I L L A + + ++ C D+ +I A K G L+ A L +
Sbjct: 505 NSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLD 564
Query: 226 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK----WV------PSSET 275
+G P T+ + + + C+ +GR +GGK W+ P++ T
Sbjct: 565 KGIKPTIVTYNVLMNGF-----------CM-----SGRVEGGKKLLDWMLEKNIHPNAAT 608
Query: 276 IRTFMRHFEQEKDV 289
+ M+ + E ++
Sbjct: 609 YNSLMKQYCIENNM 622
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 6/252 (2%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
EL L + FN L+ + G A + M+ + PD+ TYN + A +
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLG 260
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
A ++ MKRDG +A T++ L S + G ++A + ++ + DL Y L
Sbjct: 261 EARALLARMKRDG-IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVL 319
Query: 134 ITLYGQTGNLSEVYRI---WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
Q G + E +R+ L A P+ ++Y ++ + A + +E
Sbjct: 320 AMGLCQAGKVDEAFRLKDEMERLGTALPDV--VTYNTLVDACFKWRCSSDALRLLEEMRD 377
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
+ N+++ + KEG+LE A E+ G P+ T+ D Y + G++
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAK 437
Query: 251 AVDCLEKAIDTG 262
A +++ + G
Sbjct: 438 AFTLMDEMVGKG 449
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 129/308 (41%), Gaps = 20/308 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A ALL +MK + + +N+L++ +A+ G ++ +++ M A PD TYN
Sbjct: 258 MLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYN 317
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V L + A R+ +EM+R G D T++ L + A R L+E+ +
Sbjct: 318 VLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRD 377
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN--ISYLNMIQVLVNLKDL 178
+ L + ++ + G L E + + ++A A I+Y +I ++
Sbjct: 378 KGVKPTLVTHNIVVKSLCKEGKLEEA--LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNV 435
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A E D N ++ K R E+AEEL +RG P+ ++
Sbjct: 436 AKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTV 495
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
Y + + + A+ ++ I+ K +PS T T ++ + +E
Sbjct: 496 MAAYFKEYNPEPALRLWDQMIER------KLIPSISTYNTLIKGLCR----------MER 539
Query: 299 LKKAVDDL 306
LK+A+D L
Sbjct: 540 LKEAIDKL 547
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 18/313 (5%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LLE+M++ + + + N ++ K G E+ ++++ + PD TYN + A
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+++ A +++EM G + D T + + + +E AE L R D
Sbjct: 431 KAGNVAKAFTLMDEMVGKG-LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDE 489
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
+Y ++ Y + N R+W + R P+ + +Y +I+ L ++ L A
Sbjct: 490 VSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS--TYNTLIKGLCRMERLKEAIDKL 547
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
E+ D N++I AY KEG LENA + P+ T + +
Sbjct: 548 NEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 305
G + A+ E ++ G+ T T ++ + DVD A F DD
Sbjct: 608 GKLDKALKLFESWVEKGKKV------DVITYNTLIQSMCKVGDVDTALHFF-------DD 654
Query: 306 LGVEVFEPLIRTY 318
+ V+ +P TY
Sbjct: 655 MEVKGLQPDAFTY 667
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 1/225 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LL + + + ++M Y K +PE + +M ++P TYN
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L + + A + E G V D TT++ + Y + G E A R ++ +
Sbjct: 531 IKGLCRMERLKEAIDKLNEFVEKGLV-PDETTYNIIIHAYCKEGDLENAFRFHNKMVENS 589
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ L+ G L + +++ S I+Y +IQ + + D+ A
Sbjct: 590 FKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTAL 649
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
F + E D NV++ A ++ GR E A + + G
Sbjct: 650 HFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 110/295 (37%), Gaps = 34/295 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A LEK+ E L + +N+L+ Y K G+ K ++ EM + D++T N
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE------------------ 104
+ L + AE ++ + G V + + + +A+ + E
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520
Query: 105 -----------AGL-----FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
GL ++A L E + D + Y +I Y + G+L +R
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ ++ ++ L L A K F+ W D+ N +I +
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
K G ++ A + +G P+A T+ + G + A + L K D+G+
Sbjct: 641 KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGK 695
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 133/330 (40%), Gaps = 23/330 (6%)
Query: 4 KAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A+ LL M E S + +N+++ + K G K + +EM I PD TY+
Sbjct: 200 QADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSS 259
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + AE + +M G + +WT ++NL Y G +++A R KE+ +
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWT-YNNLIYGYSSTGQWKEAVRVFKEMRRQ 318
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------VLVNL 175
+ D+ + L+ + G + E ++ ++ + N SY M+ LV++
Sbjct: 319 SILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDM 378
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
DL F I NV+I AYA G L+ A + R G PN T+
Sbjct: 379 TDL------FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTY 432
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
R G M A++ + ID G P ++ F + A+
Sbjct: 433 TTVIAALCRIGKMDDAMEKFNQMIDQG------VAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 296 L-EILKKAVDDLGVEVFEPLIRTYAAAGRT 324
+ EI+ + L + +F +I GR
Sbjct: 487 ISEIMNNGM-HLDIVLFSSIINNLCKLGRV 515
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 139/359 (38%), Gaps = 42/359 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA L +M + ++ +N+L+ Y+ TG ++ + +EM+ SI+PD T+N+
Sbjct: 271 DKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNML 330
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M +L I A V + M G+ +
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
A TF+ L Y G+ +KA E+ + ++ Y +I + G + +
Sbjct: 391 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAME 450
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ + +Y +IQ L A++ E + DI + + +I
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLC 510
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K GR+ +A+ + + G P A + + D Y G M+ A+ + + G
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------ 564
Query: 269 WVPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSP 326
P+ T + + + +D G F E+L+K + + ++ +I AGRT P
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI-LYNIIIDGLFEAGRTVP 622
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 104/262 (39%), Gaps = 3/262 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK--ASSIMPDSYTYN 60
E + LL + EL ++ L+ G + +++ M + PD YN
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYN 223
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ D++ A + +EM + G + D+ T+S++ +A +KAE L+++ N
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRG-IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVN 282
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + Y LI Y TG E R+++ +R +++ ++ L +
Sbjct: 283 KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKE 342
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F D+ N+M+ YA +G L + +L + G P T+ +
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 402
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y G + A+ + D G
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHG 424
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 36/231 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA + + M + + + + +L+ Y K G ++ ++ +EM I P + YN+
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ EM G +A + T+S + + F++A KEL N
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESG-IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 669
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ +I QT + E ++ A+IS ++ +V
Sbjct: 670 VKIDIITLNTMIAGMFQTRRVEEAKDLF----------ASISRSGLVPCVV--------- 710
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
TY I +TN++ KEG +E AE++ + G +P+++
Sbjct: 711 -----------TYSIMITNLI-----KEGLVEEAEDMFSSMQNAGCEPDSR 745
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/237 (16%), Positives = 89/237 (37%), Gaps = 1/237 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + +M++ + + + + +++ + G + +M + PD Y Y+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A+ +I E+ +G + D FS++ + + G A+ N
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNG-MHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN 527
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H Y L+ Y G + + R++ ++ A ++ Y ++ + +
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
F+E + N++I + GR A+ G N T+ I
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 644
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/294 (18%), Positives = 106/294 (36%), Gaps = 7/294 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ L+ ++ + + F+S++ K G I + P + Y++ M
Sbjct: 482 KAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V + A RV + M G + + + L + Y + G ++ +E+ +
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAG-IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y +I + G + + + +Y +++ L + A
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 660
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
FKE + DI N MI + R+E A++L R G P T+ I +
Sbjct: 661 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLI 720
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G ++ A D + G P S + +R ++ ++ A +L
Sbjct: 721 KEGLVEEAEDMFSSMQNAG------CEPDSRLLNHVVRELLKKNEIVRAGAYLS 768
>gi|115463017|ref|NP_001055108.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|113578659|dbj|BAF17022.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|125551683|gb|EAY97392.1| hypothetical protein OsI_19323 [Oryza sativa Indica Group]
gi|215697097|dbj|BAG91091.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630985|gb|EEE63117.1| hypothetical protein OsJ_17925 [Oryza sativa Japonica Group]
Length = 757
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 37/245 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE + +MKE L ++M +N LM Y + PE + +++ EM+ + P++ +YN
Sbjct: 426 EEAEGVFVEMKEKGLSATAMTYNILMGAYCRRLQPEVVESLLLEMQDLGLRPNARSYNFL 485
Query: 63 MRALAAVNDIS-GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R +S AE MK DG + +T+++L Y GL EKA +++
Sbjct: 486 IRVYGQQKKMSEKAEDAFLRMKTDG-IMPTSSTYTSLLCAYAVNGLHEKAYLTYVDMKRE 544
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L Y LI ++ + G+ ++ WRS ++N K +PG
Sbjct: 545 GLKPSLETYTALIDMFRRAGDTEKLMETWRS-------------------MINEK-VPGT 584
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F ++++ AK G A ++ RR G P T+ I +
Sbjct: 585 RVIF---------------HMVLDGLAKHGLYVQATDVIYEFRRAGLQPTVMTYNILMNA 629
Query: 242 YLRNG 246
+ R G
Sbjct: 630 FARGG 634
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 98/251 (39%), Gaps = 42/251 (16%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
SL+ ++ G + I M+ I ++ YN + A N I AE V EMK
Sbjct: 379 SLIKIFCDNGLKTEALIIQSAMEKKGIASNTSMYNTLINAYCKANQIEEAEGVFVEMKEK 438
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G ++A T++ L Y E E L E+++ + +Y FLI +YGQ +SE
Sbjct: 439 G-LSATAMTYNILMGAYCRRLQPEVVESLLLEMQDLGLRPNARSYNFLIRVYGQQKKMSE 497
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
A ++L M + +P + +TY ++
Sbjct: 498 --------------KAEDAFLRMKTDGI----MPTS-----------STY-----TSLLC 523
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AYA G E A +R G P+ +T+ D + R GD EK ++T R
Sbjct: 524 AYAVNGLHEKAYLTYVDMKREGLKPSLETYTALIDMFRRAGDT-------EKLMETWRSM 576
Query: 266 GGKWVPSSETI 276
+ VP + I
Sbjct: 577 INEKVPGTRVI 587
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ + + L + M +N LM +A+ G K+P +++EM A + PDS TY+ +
Sbjct: 603 QATDVIYEFRRAGLQPTVMTYNILMNAFARGGQHYKLPQLLKEMAAMELKPDSVTYSTMI 662
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A A V D S A + M R G++ D +++ L + L KA R K ++++NA
Sbjct: 663 YAYARVRDFSRAFYYHKLMVRSGQL-PDVSSYKKLLNT-----LDVKAAR--KNIKDKNA 714
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 5/183 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M+EKAE +MK + +S + SL+ YA G EK +MK + P TY
Sbjct: 495 MSEKAEDAFLRMKTDGIMPTSSTYTSLLCAYAVNGLHEKAYLTYVDMKREGLKPSLETYT 554
Query: 61 VWMRALAAVNDISGAERVIEEMKR--DGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ D E+++E + + +V F + + GL+ +A + E
Sbjct: 555 ALIDMFRRAGD---TEKLMETWRSMINEKVPGTRVIFHMVLDGLAKHGLYVQATDVIYEF 611
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ Y L+ + + G ++ ++ + + +++Y MI ++D
Sbjct: 612 RRAGLQPTVMTYNILMNAFARGGQHYKLPQLLKEMAAMELKPDSVTYSTMIYAYARVRDF 671
Query: 179 PGA 181
A
Sbjct: 672 SRA 674
>gi|357123699|ref|XP_003563545.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 492
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L M+ + S+ + L+ A+ G + A++ EM+ + PD+ YN + L
Sbjct: 75 VLADMEAAGMRPSAAAYARLIRALARAGRTLEAEALLLEMRHLGLRPDAAHYNALLEGLL 134
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A + A+R++ +M DG VA + T+ L Y AG E + L E++ R D
Sbjct: 135 ARAHLCLADRLLLQMADDG-VARNRRTYMLLLDAYARAGRLEDSWWVLGEMKRRGIQLDT 193
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ Y L+ LY G +W+ A + M ++ V L
Sbjct: 194 AGYSTLVRLYRDNG-------MWKK--------ATDLIMEMQELGVEL------------ 226
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
D+++ N +I + K G+L +A L E+ R G P+ TW ++ R G+
Sbjct: 227 --------DVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGN 278
Query: 248 MKLAV 252
MK A+
Sbjct: 279 MKRAL 283
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEALL +M+ L L + +N+L+ H ++ +M + + TY +
Sbjct: 104 TLEAEALLLEMRHLGLRPDAAHYNALLEGLLARAHLCLADRLLLQMADDGVARNRRTYML 163
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A + + V+ EMKR G + D +S L +Y + G+++KA + E++
Sbjct: 164 LLDAYARAGRLEDSWWVLGEMKRRG-IQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQEL 222
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y LI +G+ G L++ R++ +R ++ +I+ + ++ A
Sbjct: 223 GVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWNALIRWHCRVGNMKRA 282
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F + D ++ +I ++G+ + ++L ++ R RG + + + D
Sbjct: 283 LRFFAAMQEEGMYPDPKIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDI 342
Query: 242 YLRNGDMKLAVDCL 255
Y + G + A +C+
Sbjct: 343 YGQYGRFRDAHECV 356
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 109/253 (43%), Gaps = 19/253 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA L+ +M+EL + +N L+ + K G + ++M+A I PD T+N
Sbjct: 208 MWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARRLFEKMRAEGIKPDIATWN 267
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+R V ++ A R M+ +G + D F ++ S E G +++ ++ ++ N
Sbjct: 268 ALIRWHCRVGNMKRALRFFAAMQEEG-MYPDPKIFMSIISRLGEQGKWDELKKLFDKMRN 326
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--------AFPNTAN-ISYLNMIQV 171
R + Y L+ +YGQ G + + +L+ F AN + + +
Sbjct: 327 RGLKESGAVYAVLVDIYGQYGRFRDAHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQ 386
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
VN+ L AE ++ + N++I A++ GR A + + + G P+
Sbjct: 387 TVNVLQLMEAEGI---------EPNLVMLNLLINAFSTAGRHLEAVAVFQHIKDSGMSPD 437
Query: 232 AKTWEIFSDYYLR 244
T+ ++R
Sbjct: 438 VVTYTTLMKGFMR 450
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 112/280 (40%), Gaps = 7/280 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L +MK + + +++L+ LY G +K +I EM+ + D YN +
Sbjct: 180 VLGEMKRRGIQLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFG 239
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ A R+ E+M+ +G + D T++ L + G ++A R ++ + D
Sbjct: 240 KYGQLADARRLFEKMRAEG-IKPDIATWNALIRWHCRVGNMKRALRFFAAMQEEGMYPDP 298
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ +I+ G+ G E+ +++ +R + Y ++ + A +C
Sbjct: 299 KIFMSIISRLGEQGKWDELKKLFDKMRNRGLKESGAVYAVLVDIYGQYGRFRDAHECVAA 358
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
++ + V+ AYA++G E + + G +PN + + + G
Sbjct: 359 LKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFSTAGR 418
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
AV + D+G P T T M+ F + K
Sbjct: 419 HLEAVAVFQHIKDSGMS------PDVVTYTTLMKGFMRVK 452
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + +K L S F L YA+ G E+ ++Q M+A I P+ N+ +
Sbjct: 352 AHECVAALKAEELHLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLIN 411
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + A V + +K G ++ D T++ L ++ FEK E+E
Sbjct: 412 AFSTAGRHLEAVAVFQHIKDSG-MSPDVVTYTTLMKGFMRVKKFEKVSEVYNEMERAGCT 470
Query: 125 RDLSAYQFL 133
D A + L
Sbjct: 471 PDRKAREML 479
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 10/299 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A AL+E M E + + +NS++T + + ++ +++M A PD TY
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTAL 185
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ ++ E+ R G D T+S + +AG A +E+ +
Sbjct: 186 IGGFCKSRDVGRGLELLGEVTRRG-FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---S 241
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
Y LI Y + G++ E R+ + ++Y ++ + L A
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F++ + + D+ ++ EGR+E+A EL E RRG P T+ D Y
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 361
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ ++ A E+ + R G +VP++ T + + D A +L+ L
Sbjct: 362 CKANQVRKA----EELVADFRSRG--FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS 414
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 116/282 (41%), Gaps = 12/282 (4%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++QEM ++ +PD+ T V +++L + + A ++EEM G +AA+ T+S L
Sbjct: 61 VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG-MAANAITYSALVDGL 119
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+ ++A ++ + R + Y +IT + + + E + + +
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
I+Y +I +D+ + E T DI + +I K GRL +A ++ E
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
P A T+ Y R GDM A+ L K +D K P T T M
Sbjct: 240 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD------KCAPDVVTYTTLMSA 290
Query: 283 FEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
F + +D A E F +++ + V F L+ GR
Sbjct: 291 FCKMGRLDDAYELFQQMVANKLSP-DVVTFTSLVDGLCGEGR 331
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L+E+M + +++ +++L+ K ++ A+++ M P TYN
Sbjct: 91 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSI 150
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A +E+M +G D T++ L + ++ + L E+ R
Sbjct: 151 ITGFCRARRVDEAHGFMEQMVAEG-CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG 209
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y +I + G L + I+ + A P I+Y ++I D+ A
Sbjct: 210 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA-PTA--ITYNSLIGGYCRAGDMDEAI 266
Query: 183 KCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ K + CA D+ ++ A+ K GRL++A EL ++ P+ T+ D
Sbjct: 267 RLLGKMVDDKCAP-DVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 325
Query: 242 YLRNGDMKLAVDCLEK 257
G M+ A++ LE+
Sbjct: 326 LCGEGRMEDALELLEE 341
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 21/269 (7%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++ +E++ +++ +NSL+ Y + G ++ ++ +M PD TY M A
Sbjct: 234 VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCK 293
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+ + A + ++M + +++ D TF++L G E A L+E+ R +
Sbjct: 294 MGRLDDAYELFQQMVAN-KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 352
Query: 129 AYQFLITLY---GQTGNLSEVYRIWRSLRLAFPNTANISYL--------NMIQVLVNLKD 177
Y ++ Y Q E+ +RS R PNT + L Q L L
Sbjct: 353 TYNCVVDGYCKANQVRKAEELVADFRS-RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 411
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
L E G + + +++ A ++GR ++A + E +RG P A T+
Sbjct: 412 L--------NSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 463
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
+ + A + LE+ I G G
Sbjct: 464 VVFALCKAHQPQQAHELLEEMIKYGHTPG 492
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 108/276 (39%), Gaps = 22/276 (7%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD TY + L+ + A +V++EM R D TT + + + A
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMV-SARHVPDNTTLTVVVQSLCLGDRVDDARE 95
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 171
++E+ +R + Y L+ + L E + ++ R P ++Y ++I
Sbjct: 96 LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTV--VTYNSIITG 153
Query: 172 LVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ + A ++ + GC DI +IG + K + EL RRG P
Sbjct: 154 FCRARRVDEAHGFMEQMVAEGCHP-DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTP 212
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
+ T+ D + G ++ AVD E+ P++ T + + + + D+D
Sbjct: 213 DIVTYSTVIDGLCKAGRLRDAVDIFEEM---------SCAPTAITYNSLIGGYCRAGDMD 263
Query: 291 GAEGFLEILKKAVDD---LGVEVFEPLIRTYAAAGR 323
A + +L K VDD V + L+ + GR
Sbjct: 264 EA---IRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 89/226 (39%), Gaps = 7/226 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L + F SL+ G E +++E+ P YTYN
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--EN 120
+ N + AE ++ + + G V + T++ L + AG ++A + L +L E
Sbjct: 358 VDGYCKANQVRKAEELVADFRSRGFVP-NTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 416
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
++ Y ++ + G + + + + R P A ++ ++ L
Sbjct: 417 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAA--TFATVVFALCKAHQP 474
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
A + +E T + ++ AY + G ++ A+EL R
Sbjct: 475 QQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520
>gi|410110145|gb|AFV61152.1| pentatricopeptide repeat-containing protein 123, partial [Nashia
inaguensis]
Length = 433
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S PD YN
Sbjct: 27 LFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCDYSKAISIFSRLKRSGFXPDLVAYN 86
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EMK G V + T++S L ++YVE F +A E+
Sbjct: 87 AMINVFGKAKLFREARSLISEMKTAG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMRE 145
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ +R + +SY +++V + +
Sbjct: 146 IKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPSVVSYNTLLRVYGDAELFGE 205
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PN+ T+
Sbjct: 206 AIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIIS 265
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 266 IWGKVGKLDRAAMLFQKLRSSG 287
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 46 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
EM+ ++ PD YTY+ + A +++M++D +V D +SNL + +
Sbjct: 2 EMRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQD-QVPGDLILYSNLIELSXKL 60
Query: 106 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 163
+ KA L+ DL AY +I ++G+ E + ++ A PNT
Sbjct: 61 CDYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT-- 118
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 119 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKL 250
R+ G +P+ ++ Y GD +L
Sbjct: 179 RKMGIEPSVVSYNTLLRVY---GDAEL 202
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 15/238 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 205 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 264
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 265 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 323
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 324 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGXVKDITVFERMIHLLSKYKKYSNVV 378
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + D V +++ AY K + A ++ + G +FSD
Sbjct: 379 EVFDKXRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGC--------VFSD 428
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 239 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 298
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 299 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 353
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ ++I +++N L
Sbjct: 354 XVKDITVFERMIHLLSKYKKYSNVVEVFDKXRGLGY-FPDS------DVIAIVLNAYGKL 406
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
++ A + E E GC D
Sbjct: 407 QEFDKANDVYMEMQEVGCVFSD 428
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L ++M + + ++ + SL+ + K +K ++ M + P+ T+N+ +
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
N I + +M G V AD T++ L + E G E A+ +E+ +R
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRG-VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ +Y+ L+ G + I+ + + +I N+I + + A K
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-KMELDIGIYNII-----IHGMCNASK 507
Query: 184 CFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
W+ C+ D++ N+MIG K+G L A+ L + G PN T+ I
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 238 FSDYYLRNGD 247
+L GD
Sbjct: 568 LIRAHLGEGD 577
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L+++M E + + + ++ + K+G ++++M+ I D+ Y++ +
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + A + EM+ G AD ++ L + AG ++ + L+++ R
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ A+ LI + + G L E + + + R P+T ++Y ++I L A
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT--VTYTSLIDGFCKENQLDKAN 372
Query: 183 KCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
S GC +IR N++I Y K +++ EL + RG + T+
Sbjct: 373 HMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 242 YLRNGDMKLA 251
+ G +++A
Sbjct: 432 FCELGKLEVA 441
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 127/328 (38%), Gaps = 24/328 (7%)
Query: 11 KMKELNLGFSSM-------------PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 57
+ ++L+L FS+M F++L+ G + ++ M P
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
T N + L +S A +I+ M G + T+ + + ++G A L++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+E R D Y +I + G+L + ++ + + I Y +I+
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
K ++ T D+ + +I + KEG+L AEEL + +RG P+ T+
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV-DGAEGFL 296
D + + + A L+ + G G P+ T + + + + DG E F
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCG------PNIRTFNILINGYCKANLIDDGLELFR 411
Query: 297 EI-LKKAVDDLGVEVFEPLIRTYAAAGR 323
++ L+ V D + LI+ + G+
Sbjct: 412 KMSLRGVVAD--TVTYNTLIQGFCELGK 437
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 9/260 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A LL KM+E + ++ ++ ++ K G + + EM+ D Y
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 62 WMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+R +++ +M KR ++ D FS L +V+ G +AE KE+
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKR--KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI---QVLVNLKD 177
R D Y LI + + L + + L ++ NI N++ NL D
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
G E F++ D N +I + + G+LE A+EL + R P+ +++I
Sbjct: 405 -DGLE-LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 238 FSDYYLRNGDMKLAVDCLEK 257
D NG+ + A++ EK
Sbjct: 463 LLDGLCDNGEPEKALEIFEK 482
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 5/245 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A L+++M E+ + + N+L+ G +I M + P+ TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ + + A ++ +M+ + ++ D +S + + G + A E+E +
Sbjct: 218 VLKVMCKSGQTALAMELLRKME-ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
D+ Y LI + G + ++ R + R P+ S L I V L
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL--IDCFVKEGKLR 334
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE+ KE + D +I + KE +L+ A + + +G PN +T+ I
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 240 DYYLR 244
+ Y +
Sbjct: 395 NGYCK 399
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/215 (18%), Positives = 90/215 (41%), Gaps = 1/215 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ + G + ++++M I PD ++ + + AE + +EM
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G ++ D T+++L + + +KA L + ++ ++ + LI Y + +
Sbjct: 345 QRG-ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ ++R + L ++Y +IQ L L A++ F+E S DI ++
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ G E A E+ E+ + + + + I
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 12/298 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA LE+M+ + + + + +N L+ Y E +I EM PD +Y
Sbjct: 221 DKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTV 280
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L I ++E+M +D + D T++ + + G ++A L+E E R
Sbjct: 281 MGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERR 340
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y ++ + + G + + I + + P+ ++Y ++I L + +
Sbjct: 341 FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV--VTYTSVINGLCQERKVDQ 398
Query: 181 AEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A+K ++ ++ GC + T ++ G K G A E+ + PNA T+ +
Sbjct: 399 AKKMLRQMYKHGCKPNTVSYTALLNG-LCKNGNSLEAREMMNMSEEDWWIPNAITYSVLM 457
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ R G A D + + I G + P+ I ++ QE+ VD A+ F+E
Sbjct: 458 HGFRREGKSSEACDLVREMIKKG------FFPTPVEINLLIQSLCQEEKVDEAKRFME 509
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 17/233 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A+ +E+ + + F +++ + + E +++ +M S+ PD TY
Sbjct: 501 VDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTT 560
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL I A ++ +M R G + T+ + Y G E + L+++ +R
Sbjct: 561 IIDALGKKGRIEEATKLAMKMLRVGLIPTP-VTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R +AY +I GNL + Y++ + LR A AN ++ +I+ ++ K +P
Sbjct: 620 QECR--TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHM-LIESYLS-KGIP- 674
Query: 181 AEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+ C + D+++ + EG+ E A++L R RG
Sbjct: 675 ----LMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 723
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 4/206 (1%)
Query: 55 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
D Y + L+ GA+RV+ M + R+ F + Y AG A R
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKR-RIERRPEAFGYVMVSYSRAGKLRNAMRV 191
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
L ++ DLS I + L + R +++ I+Y +I+ +
Sbjct: 192 LTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCD 251
Query: 175 LKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERA-RRRGADPNA 232
L L A + E GC+ I VM G KE R++ L E+ + P+
Sbjct: 252 LHRLEDAMELIAEMPFKGCSPDKISYYTVM-GFLCKEKRIKEVRLLMEKMLKDSNLLPDQ 310
Query: 233 KTWEIFSDYYLRNGDMKLAVDCLEKA 258
T+ F ++G A++ L +A
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREA 336
>gi|357491817|ref|XP_003616196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517531|gb|AES99154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 981
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 149/359 (41%), Gaps = 41/359 (11%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE+LL+KM+E + ++ +N ++LYA G + + + ++ + PD+ TY +
Sbjct: 346 EAESLLDKMEERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIREVGLFPDTVTYRALL 405
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK------- 116
AL N + E VI+EM+++ V+ D + S + +Y+ G +KA L+
Sbjct: 406 GALCTENMVQAVEGVIDEMEKNS-VSLDALSLSGIVKMYINEGDVDKANDLLQKYGEPPS 464
Query: 117 -----------------ELEN---------RNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
E EN R A RD+ + +I YG+ + + ++
Sbjct: 465 FICAAIIDAFAEKGFWAEAENIFYRKRDKARQA-RDILEFNVMIKAYGKANHYDKAVLLF 523
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
++ + A+ +Y ++IQ+L + A E + + + +IG YA+
Sbjct: 524 EEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQEMGFKPHCQTFSAVIGCYARL 583
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
G+L +A + + G PN + + + +G + A+ ++G
Sbjct: 584 GQLSDAVIVYQEMISAGVKPNETVYGALINGFAEHGRLDEALQYFHLMQESGLS------ 637
Query: 271 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVML 329
+ + T M+ + + D+ G + + ++ L + +I +A G S L
Sbjct: 638 ANLVVLTTLMKSYSKAGDLKGVKSIYKQMQNMEGVLDLAARSSMITAFAELGLVSEAKL 696
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 5/169 (2%)
Query: 56 SYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 115
S TYN + + A V +M + G VA D TF+ L I G +AE L
Sbjct: 293 STTYNTLIDLYGKAGRLKDAADVFADMMKSG-VAMDTCTFNTLIFISGSHGNLLEAESLL 351
Query: 116 KELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLV 173
++E R + Y ++LY G++ +R +R FP+T ++Y ++ L
Sbjct: 352 DKMEERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIREVGLFPDT--VTYRALLGALC 409
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+ E E E + D + ++ Y EG ++ A +L ++
Sbjct: 410 TENMVQAVEGVIDEMEKNSVSLDALSLSGIVKMYINEGDVDKANDLLQK 458
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A L +M+E+ F++++ YA+ G + QEM ++ + P+ Y
Sbjct: 550 LVDQARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQLSDAVIVYQEMISAGVKPNETVYG 609
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A + M+ G ++A+ + L Y +AG + + K+++N
Sbjct: 610 ALINGFAEHGRLDEALQYFHLMQESG-LSANLVVLTTLMKSYSKAGDLKGVKSIYKQMQN 668
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE 145
DL+A +IT + + G +SE
Sbjct: 669 MEGVLDLAARSSMITAFAELGLVSE 693
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 33/247 (13%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
S +N+L+ LY K G + + +M S + D+ T+N + + ++ AE +++
Sbjct: 293 STTYNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLEAESLLD 352
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
+M+ G ++++ T++ S+Y AG + A + + D Y+ L+
Sbjct: 353 KMEERG-ISSNTRTYNIFLSLYATAGSIDAALSYYRRIREVGLFPDTVTYRALLGALCTE 411
Query: 141 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG----CATY- 195
+ V + + + +S ++++ +N D+ A +++ CA
Sbjct: 412 NMVQAVEGVIDEMEKNSVSLDALSLSGIVKMYINEGDVDKANDLLQKYGEPPSFICAAII 471
Query: 196 ---------------------------DIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
DI NVMI AY K + A L E + +G
Sbjct: 472 DAFAEKGFWAEAENIFYRKRDKARQARDILEFNVMIKAYGKANHYDKAVLLFEEMKYQGI 531
Query: 229 DPNAKTW 235
P T+
Sbjct: 532 SPADSTY 538
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA L E+MK + + +NS++ + + ++ + EM+ P T++
Sbjct: 517 DKAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQEMGFKPHCQTFSAV 576
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + +S A V +EM G V + T + L + + E G ++A + ++
Sbjct: 577 IGCYARLGQLSDAVIVYQEMISAG-VKPNETVYGALINGFAEHGRLDEALQYFHLMQESG 635
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL----NMIQVLVNLKDL 178
+L L+ Y + G+L V I++ ++ N + L +MI L +
Sbjct: 636 LSANLVVLTTLMKSYSKAGDLKGVKSIYKQMQ----NMEGVLDLAARSSMITAFAELGLV 691
Query: 179 PGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
A+ F+++ E+G A D +M+ Y G ++ A ++ E + G
Sbjct: 692 SEAKLTFEKFKETGQA--DSTSYGIMMYVYKDIGMIDEAIKIAEEMKISG 739
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 57/302 (18%), Positives = 102/302 (33%), Gaps = 25/302 (8%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ L+ Y K G ++ ++ M PD T + ++ L V + A+R
Sbjct: 168 YSMLVHCYGKGGLGKEALLWVKHMMVRGFFPDEVTMSTVVKVLKDVGEFDRADRF----- 222
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT-LYGQTGN 142
+ N V+ + + + +S QFL T L+ G
Sbjct: 223 -----------YKNWCGGKVDLDDLDFDSSDCAIADGSRSSVPISFKQFLSTELFKTGGG 271
Query: 143 LSEVYRIWRSLRLAFPNTANIS--YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
+ + + + P +S Y +I + L A F + D
Sbjct: 272 IRDSNMLSMDMEEIAPLKPRLSTTYNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTF 331
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N +I G L AE L ++ RG N +T+ IF Y G + A+ + +
Sbjct: 332 NTLIFISGSHGNLLEAESLLDKMEERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIRE 391
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
G P + T R + E V EG ++ ++K L +++ Y
Sbjct: 392 VG------LFPDTVTYRALLGALCTENMVQAVEGVIDEMEKNSVSLDALSLSGIVKMYIN 445
Query: 321 AG 322
G
Sbjct: 446 EG 447
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 6/192 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS-IMPDSYTY 59
M ++A + E+MK L + +N ++T YA K ++ EM S ++PD T
Sbjct: 724 MIDEAIKIAEEMKISGLLRDCVSYNRVLTCYAINRQFHKCGELLYEMIVSKKLLPDDGTL 783
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
V L A +E ++G+ A T++ L S+ L K + + LE
Sbjct: 784 IVLFTILKKAEFPVEAAEQLELCYQEGKPYASQATYTALYSLLGMHTLALKFAQTV--LE 841
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
N ++ +AY I Y G++ + I +R ++Y+N++ +
Sbjct: 842 NLDSS---AAYNVAIYAYASAGDVEKALNIHMKMRDKHVEPDIVTYINLVGCYGKAGMVE 898
Query: 180 GAEKCFKEWESG 191
G +K +E G
Sbjct: 899 GVKKIHSLFEYG 910
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L++MKE + +NSL+ +K ++ + + EM + + P+++TY ++
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ + A++ ++EM+ G V + + L + Y + +A A + + ++ D
Sbjct: 534 EASEFASADKYVKEMRECG-VLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDA 592
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+ + + + I+R +R SY +I L ++ A F E
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
T ++ + N+++G + + G +E A+EL + +G PNA T+ D Y ++GD
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 248 M 248
+
Sbjct: 713 L 713
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 143/357 (40%), Gaps = 59/357 (16%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA+AL + M L + + SL+ Y + + + ++ EMK +I+ YTY
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + + D+ GA +++EM G + ++ L +++ F A R LKE++ +
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 123 AHRDLSAYQFLITLYGQTGNLSE-----VYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
D+ Y LI + + E V + L+ PN +Y I + +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK---PNA--FTYGAFISGYIEASE 537
Query: 178 LPGAEKCFKEW-ESG------------------------CATY----------DIRVTNV 202
A+K KE E G C+ Y D + V
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++ K ++++AEE+ R +G P+ ++ + + + + G+M+ A ++ ++ G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
P+ + F + +++ A K+ +D++ V+ P TY
Sbjct: 658 ------LTPNVIIYNMLLGGFCRSGEIEKA-------KELLDEMSVKGLHPNAVTYC 701
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 98/254 (38%), Gaps = 41/254 (16%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ AE + +M+ + + L+ ++K G+ +K +I EM + P+ YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +I A+ +++EM G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKG----------------------------------- 692
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
H + Y +I Y ++G+L+E +R++ ++L + Y ++ L D+ A
Sbjct: 693 -LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER----ARRRGADPNAKTWEI 237
F + GCA+ N +I K G+ E E+ R + R PN T+ I
Sbjct: 752 ITIFGTNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 238 FSDYYLRNGDMKLA 251
DY + G+++ A
Sbjct: 811 MIDYLCKEGNLEAA 824
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 126/301 (41%), Gaps = 11/301 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA ++ ++M E L + + +N L+ + ++G EK ++ EM + P++ TY
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--EN 120
+ D++ A R+ +EMK G V D ++ L ERA+
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLV-PDSFVYTTLVD---GCCRLNDVERAITIFGTNK 759
Query: 121 RNAHRDLSAYQFLITL---YGQTGNLSEVY-RIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ + + LI +G+T +EV R+ F +++Y MI L
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+L A++ F + ++ + ++ Y K GR + + A G +P+ +
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ + +L+ G A+ +++ D G + S T R + F + +++ AE +
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL-SISTCRALLSGFAKVGEMEVAEKVM 938
Query: 297 E 297
E
Sbjct: 939 E 939
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 118/262 (45%), Gaps = 3/262 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A LL +M + + + + SL++ K G ++ + M PD YNV
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + D+ A R+ EEM G + +T +++L S + G F + + K++ +
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT-YNSLLSGFSRKGEFGRVQSLFKDMLRQ 221
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPG 180
++ + L+ + + G++ E +R++ +R L P +SY +I+ + +
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV-VSYNTLIRGMCSKGKPHE 280
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A++ +E DI N++I Y+K G L++A +L + G +P+A ++ D
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
R G + A + I G
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANG 362
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 101/236 (42%), Gaps = 3/236 (1%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
+++ ++ +N L+ + AK+G + + +M A+ +P++YTY +R+L
Sbjct: 10 QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
A V M G + + ++S L + ++A L E+ + ++ Y L
Sbjct: 70 EARSVFRGMAAQG-CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL 128
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGC 192
++ + G L E ++ + + Y +I D+ A + F+E E GC
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ N ++ ++++G + L + R+G PN T+ D + + GDM
Sbjct: 189 IP-TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 1/216 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L E+M E + +NSL++ +++ G ++ ++ ++M +P+ +T+N +
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ D+ A R+ EM+ G D +++ L G +A+R L+E+
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLG-CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ +Y LI Y ++G L +++ + + SY +I L + A
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFV 353
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
FK+ + + D V ++ + RL + EL
Sbjct: 354 VFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCEL 389
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 6/157 (3%)
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
Y +L+ Q E ++R + + SY +I L + + A + E
Sbjct: 55 YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
G ++ ++ K G+L+ A +L R RG P+ + + D + + GDM
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174
Query: 250 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 286
A E+ ++ G +P+ T + + F ++
Sbjct: 175 EAYRLFEEMLEKG------CIPTVFTYNSLLSGFSRK 205
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 155/377 (41%), Gaps = 48/377 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ LL +MKE L ++ + L+ YA++ + + EMK I D T N+
Sbjct: 147 KEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMM 206
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF-------------- 108
+ + + AE + M + + + T++ + +Y EA L
Sbjct: 207 IDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKG 266
Query: 109 ----------------------EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
EKA R +++++ R + Y LI++YG+TG
Sbjct: 267 GVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRA 326
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
++++LR I Y +MI V + A++ +E + DI + I
Sbjct: 327 AFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQP----DIVPRDTAISI 382
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
AK +LE A +L R+ G + T++ ++RN K A+D E ++G
Sbjct: 383 LAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESG---- 438
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG--RT 324
++P SET + + Q + ++ AE +++ L EV +++ Y A R
Sbjct: 439 --FLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIRE 496
Query: 325 SPVMLRRLKMEKVEVSE 341
+ M LK+E ++ E
Sbjct: 497 AEDMFAALKLEGLDGDE 513
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 3/235 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+ +M E +L F++L++ Y + E +QEM+A I PD ++
Sbjct: 42 ELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWLQEMEAGGIKPDLVIFSTL 101
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V D S A + ++K G +A D ++++ ++Y +A +++A+ L E++
Sbjct: 102 IELAGKVKDYSKATSLFSKLKASG-IAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAG 160
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D +Y LI Y ++ E +++ ++ + MI V L+ + AE
Sbjct: 161 LMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAE 220
Query: 183 KCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGA-DPNAKTW 235
+ F VT N MI Y + L A + + +G +PN T+
Sbjct: 221 ELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITY 275
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 1/200 (0%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
S +N ++ + E ++ EM ++PD +T++ + N + A +
Sbjct: 24 SIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGWL 83
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
+EM+ G + D FS L + + + KA +L+ D Y +I LYG+
Sbjct: 84 QEMEAGG-IKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGK 142
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
E + ++ A +SY +I + A++ F E ++ D+
Sbjct: 143 AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTT 202
Query: 200 TNVMIGAYAKEGRLENAEEL 219
N+MI Y K + +AEEL
Sbjct: 203 CNMMIDVYGKLEMVRDAEEL 222
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 4/203 (1%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
P + YNV ++ + AE ++ EM V D TFS L S Y A E A
Sbjct: 23 PSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVP-DKFTFSTLISGYGRANRLEDAMG 81
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
L+E+E DL + LI L G+ + S+ ++ L+ + + Y +MI +
Sbjct: 82 WLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYG 141
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
K A+ E + D ++I AYA+ + A+++ + +G +
Sbjct: 142 KAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVT 201
Query: 234 TWEIFSDYYLRNGDMKLAVDCLE 256
T + D Y G +++ D E
Sbjct: 202 TCNMMIDVY---GKLEMVRDAEE 221
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 119/265 (44%), Gaps = 9/265 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ +++ K KE+ L + NSL+ + G E++ + + MK + I P ++YN
Sbjct: 161 DSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFL 220
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I AERV E M+ +G++ D T++ + Y E G KA LK +E RN
Sbjct: 221 VNGLVNSKFIESAERVFEVME-NGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRN 279
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---LAFPNTANISYLNMIQVLVNLKDLP 179
D Y LI G+ ++ + L P ++ L + + + K +
Sbjct: 280 VAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIP--PHVYSLVIGGLCKDGKRVE 337
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G GC ++ + +I + AK G + A L +R ++ G +P+ T+ +
Sbjct: 338 GYTVFENMISKGCKA-NVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIV 396
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRG 264
+ ++G + A++ +E +G+G
Sbjct: 397 NSLCKSGRLDEALEYMEFC--SGKG 419
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/225 (18%), Positives = 90/225 (40%), Gaps = 1/225 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL+ + A G + + ++ + K ++ Y+ N +++ + + V MK
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + +++ L + V + E AER + +EN D+ Y +I Y + G
Sbjct: 207 ENG-IEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKT 265
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + +++ L I+Y+ +IQ D + E + V +++
Sbjct: 266 RKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLV 325
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
IG K+G+ + E +G N + D + G+M
Sbjct: 326 IGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNM 370
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 108/295 (36%), Gaps = 36/295 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE + E M+ +G + +N+++ Y + G K ++ M+ ++ PD TY
Sbjct: 231 ESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTL 290
Query: 63 MRALAAVNDISGAERVIEEMK-------------------RDGRVAADWTTFSNLAS--- 100
++A A D + EM +DG+ +T F N+ S
Sbjct: 291 IQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGC 350
Query: 101 -----IYV-------EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
IY + G +A K ++ D Y ++ ++G L E
Sbjct: 351 KANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALE 410
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAY 207
+ Y ++I L + AE+ F E + GC D N +I A
Sbjct: 411 YMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPP-DSYCYNALIDAL 469
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
AK G+++ A L +R G D T+ I R + A+ + ID G
Sbjct: 470 AKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKG 524
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 98/252 (38%), Gaps = 8/252 (3%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ +L + G+ + + + + + + LI +G G + EV +WR +
Sbjct: 146 CYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRM 205
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
+ + SY ++ LVN K + AE+ F+ E+G D+ N MI Y + G+
Sbjct: 206 KENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKT 265
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 273
A E + R P+ T+ GD + L +D + G +P
Sbjct: 266 RKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLG-LYHEMD----EKGLEIPPH 320
Query: 274 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVML--RR 331
+ K V+G F ++ K V ++ LI + A G ML +R
Sbjct: 321 VYSLVIGGLCKDGKRVEGYTVFENMISKGC-KANVAIYTALIDSNAKCGNMGEAMLLFKR 379
Query: 332 LKMEKVEVSEAS 343
+K E +E E +
Sbjct: 380 MKKEGLEPDEVT 391
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 95/247 (38%), Gaps = 3/247 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+ + +MKE + S +N L+ + E + + M+ I PD TYN
Sbjct: 194 MVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYN 253
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ V A ++ M+ VA D T+ L G F+ E++
Sbjct: 254 TMIKGYCEVGKTRKAFEKLKAMELR-NVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDE 312
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS-YLNMIQVLVNLKDLP 179
+ Y +I + G E Y ++ ++ ++ AN++ Y +I ++
Sbjct: 313 KGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENM-ISKGCKANVAIYTALIDSNAKCGNMG 371
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A FK + D V++ + K GRL+ A E E +G NA +
Sbjct: 372 EAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLI 431
Query: 240 DYYLRNG 246
D ++G
Sbjct: 432 DGLGKSG 438
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +K E +L MK ++ S+ +NSLM +Y++ G EK I+ E+K+S PD Y+YN
Sbjct: 614 MVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYN 673
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ EMK G + D T++ YV +FE+A ++ +
Sbjct: 674 TMIYAYGRKGQMKEASRLFSEMKSSGLI-PDIVTYNIFVKSYVANSMFEEAIDLVRYMVT 732
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
R + Y ++ Y + G +++ +L P + ++++L
Sbjct: 733 RGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQLHPGISKQEQQRLLELL 784
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 129/314 (41%), Gaps = 44/314 (14%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL++ Y++ G ++ I + M + I PD TYN + ALA AE++ EM+
Sbjct: 462 YVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEME 521
Query: 84 R-DGRVAADWTTFSNLASIYVEAGLFEK-------------------------------- 110
D R D ++S+L Y A +K
Sbjct: 522 NLDCR--PDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNN 579
Query: 111 ---AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN 167
E+A EL R D++ ++++YG+ + +V I ++ + N + +Y +
Sbjct: 580 LSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNS 639
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
++ + L D E E +S A D N MI AY ++G+++ A L + G
Sbjct: 640 LMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSG 699
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
P+ T+ IF Y+ N + A+D + + G P+ T + ++ + +
Sbjct: 700 LIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRG------CKPNERTYNSILQEYCRHG 753
Query: 288 DVDGAEGFLEILKK 301
+ A+ FL L +
Sbjct: 754 KIADAKSFLSNLPQ 767
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A +L++M+ S + +NSL++ Y K G ++ + +EM+ I PD TY
Sbjct: 299 MHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYT 358
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L I A +EM R+G + T++ L ++ G F + +L +
Sbjct: 359 TLISGLDRAGKIDAAIGTYDEMLRNG-CKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRS 417
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ + L+ ++GQ G SEV +++ ++ + +Y+++I
Sbjct: 418 AGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQ 477
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ + +K DI N ++ A A+ GR E AE+L
Sbjct: 478 SMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKL 516
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 4/244 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEK-IPAIIQEMKASSIMPDSYTYNVWM 63
A A+ +M + + + +N ++ +Y+K P K + A++ MK I D YTYN +
Sbjct: 197 AVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMKNDGIPLDRYTYNTLI 256
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +V +EM+ G D TF++L +Y +A + ++A LKE+E
Sbjct: 257 SCCRRGALYKEAAKVFDEMRAAG-FEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGC 315
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI+ Y + G L E + + + I+Y +I L + A
Sbjct: 316 PPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIG 375
Query: 184 CFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E +GC ++ N +I + G+ + + R G P+ TW +
Sbjct: 376 TYDEMLRNGCKP-NLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVF 434
Query: 243 LRNG 246
+NG
Sbjct: 435 GQNG 438
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 113/274 (41%), Gaps = 36/274 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ L+ G ++ A+ +++++ +PD T+N + S V +EMK
Sbjct: 392 YNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMK 451
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G V + T+ +L S Y GLF+++ K + + D+S Y +++ + G
Sbjct: 452 KSGYVP-ERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRW 510
Query: 144 SEVYRI---------------WRSLRLAFPNTANI----------------SYLNMIQ-- 170
+ ++ + SL A+ N + S+ +++
Sbjct: 511 EQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTL 570
Query: 171 VLVNLK--DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
VLVN K +L EK F E + DI V N M+ Y K ++ EE+ +
Sbjct: 571 VLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSI 630
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ + T+ Y R GD + + L + +G
Sbjct: 631 NLSTATYNSLMHMYSRLGDCEKCENILTEIKSSG 664
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 1/246 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A + ++M+ + FNSL+ +Y K ++ +++EM+ P TYN
Sbjct: 264 LYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYN 323
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A + EEM+ G + D T++ L S AG + A E+
Sbjct: 324 SLISSYVKDGLLKEAAELKEEMEVKG-IQPDVITYTTLISGLDRAGKIDAAIGTYDEMLR 382
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+L Y LI L+G G E+ ++ LR A +++ ++ V
Sbjct: 383 NGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSE 442
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
FKE + + +I +Y++ G + + E+ +R G P+ T+
Sbjct: 443 VSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLS 502
Query: 241 YYLRNG 246
R G
Sbjct: 503 ALARGG 508
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 120/306 (39%), Gaps = 20/306 (6%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV----NDISGAERVI 79
+ +L++ +++ A+ + M A+ I P TYNV + + + D+ ++
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA---LV 237
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
+ MK DG + D T++ L S L+++A + E+ D + L+ +YG+
Sbjct: 238 DSMKNDG-IPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGK 296
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
E + + + L + ++Y ++I V L A + +E E D+
Sbjct: 297 ARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVIT 356
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG---DMKLAVDCLE 256
+I + G+++ A + R G PN T+ + G +M D L
Sbjct: 357 YTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLR 416
Query: 257 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 316
A +VP T T + F Q G + +KK+ + + LI
Sbjct: 417 SA---------GFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLIS 467
Query: 317 TYAAAG 322
+Y+ G
Sbjct: 468 SYSRCG 473
>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 7/268 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS---IMPDSY 57
M + +ALL KMKEL L ++ +N+L+ Y G PE+ A++ M S + P+
Sbjct: 125 MEDAVQALL-KMKELGLNPTTSTYNTLIKGYGIAGKPERSSALLDLMLEESNVDVRPNIR 183
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
T+NV ++A + A V+ +M+ G V D T++ +A+ YV+ G +AE + E
Sbjct: 184 TFNVLVQAWCKKKKVEEAWEVVHKMEECG-VRPDTVTYNTIATCYVQKGETVRAESEVVE 242
Query: 118 --LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 175
+ A + ++ Y + G + + R R ++ + + ++I V +
Sbjct: 243 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV 302
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
D G ++ + D+ + ++ A++ G +E A ++ + + G P+A +
Sbjct: 303 MDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 362
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I + Y+R + K A + LE I R
Sbjct: 363 SILAKGYVRAKEPKKAEELLETLIVESR 390
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ +MKE+ + + + FNSL+ + + + I ++ MK ++ D TY+ M A +
Sbjct: 276 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWS 335
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHR 125
+ + A +V +EM + G V D +S LA YV A +KAE L+ L E+R
Sbjct: 336 SAGYMEKAAQVFKEMVKAG-VKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP--- 391
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI 163
++ + +I+ + +G++ + R++ + F + NI
Sbjct: 392 NVVIFTTVISGWCSSGSMDDAMRVFNKM-CKFGVSPNI 428
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L MKE N+ + ++++M ++ G+ EK + +EM + + PD++ Y++ +
Sbjct: 311 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 370
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ AE ++E + + R + F+ + S + +G + A R ++ ++
Sbjct: 371 RAKEPKKAEELLETLIVESR--PNVVIFTTVISGWCSSGSMDDAMRVFNKMCKFGVSPNI 428
Query: 128 SAYQFLITLY 137
++ L+ Y
Sbjct: 429 KTFETLMWGY 438
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/248 (19%), Positives = 107/248 (43%), Gaps = 14/248 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGH-----PEKIPAIIQEMKASSIMPDSY 57
E+A ++ KM+E + ++ +N++ T Y + G E + ++ + KA P+
Sbjct: 199 EEAWEVVHKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAK---PNGR 255
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
T + + + R + MK + RV A+ F++L + +VE + + L
Sbjct: 256 TCGIVVGGYCREGRVRDGLRFVRRMK-EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL 314
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
++ N D+ Y ++ + G + + ++++ + A +Y + + V K+
Sbjct: 315 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 374
Query: 178 LPGAEKCFKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
AE+ + ES ++ + +I + G +++A + + + G PN KT+
Sbjct: 375 PKKAEELLETLIVES---RPNVVIFTTVISGWCSSGSMDDAMRVFNKMCKFGVSPNIKTF 431
Query: 236 EIFSDYYL 243
E YL
Sbjct: 432 ETLMWGYL 439
>gi|115529197|dbj|BAF34331.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 728
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA L+EKM+E +L S+ ++ ++ + G ++ + EMK I P S +N
Sbjct: 186 LYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFN 245
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ D+ G RVI EMK+ G DW T Y AGL + L L +
Sbjct: 246 TLISPYGKAKDVEGIVRVITEMKKYG-CKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRD 304
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y L+ +Y + E RI+ ++R A ++I + + G
Sbjct: 305 AGWVEETGSYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDG 364
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ FKE + T + + MI Y G ++ AE L R + + + +
Sbjct: 365 AKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMIN 424
Query: 241 YYLR 244
Y+R
Sbjct: 425 VYMR 428
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 136/327 (41%), Gaps = 20/327 (6%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++AE L ++ +N ++ +Y + PE + + M+ ++PD+YTY+
Sbjct: 397 VKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHS 456
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R N + AE + + R+ V D + + + + E+ + +E+ +
Sbjct: 457 MLRMCQKCNLPAQAEEIYWRL-RNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDV 515
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLP 179
+ +I LYG+ G + E R ++L+LA F + IS+ ++ +D P
Sbjct: 516 GYVPYNITFNVMIDLYGKAG-MPE--RAHKALKLAQQFGSADKISFSTLVHAYAKKQDFP 572
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
E E ++ + N ++ AY K G++E ++ R G + ++ I
Sbjct: 573 NMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILI 632
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ Y +N + +E T + +G VP T T +R + D A +
Sbjct: 633 NTYGKN----YMIAEMETLFRTMQEEG--VVPDRWTYNTIIRTYGFADYPDRAVYWF--- 683
Query: 300 KKAVDDLGVE----VFEPLIRTYAAAG 322
KA+ D G+ + L+ T+ AG
Sbjct: 684 -KAMQDAGISPDRVTYMILVSTFERAG 709
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
EA L +M+ G S +NS++ Y K G EK+ ++ M+ S + D +YN+ +
Sbjct: 575 EAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINT 634
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
I+ E + M+ +G V W T++ + Y A ++A K +++
Sbjct: 635 YGKNYMIAEMETLFRTMQEEGVVPDRW-TYNTIIRTYGFADYPDRAVYWFKAMQDAGISP 693
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
D Y L++ + + GN+ E R W LR++
Sbjct: 694 DRVTYMILVSTFERAGNIDEAAR-W-CLRMS 722
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 156/418 (37%), Gaps = 82/418 (19%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A + +MK L + +S FN+L++ Y K E I +I EMK PD T +
Sbjct: 223 KEALSWFAEMKRLEIKPASSNFNTLISPYGKAKDVEGIVRVITEMKKYGCKPDWQTLDAA 282
Query: 63 MRAL---AAVNDISG--------------------------------AERVIEEMKRDGR 87
+RA + D++ A R+ M++ G
Sbjct: 283 VRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIFLAMRKAGM 342
Query: 88 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
++ S L + +A +F+ A+ KE++ L + +I +YG G++ E
Sbjct: 343 APKEYMCRS-LICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAE 401
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAEKCFKEWE-----SGCATY------ 195
++ SLR + +Y MI V + D+P GA K +K E TY
Sbjct: 402 GLFHSLRSSVKRLDIFAYNVMINVYMRC-DMPEGAIKVYKLMEEDHLLPDAYTYHSMLRM 460
Query: 196 ------------------------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
D + N ++ AK LE +L + G P
Sbjct: 461 CQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPY 520
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
T+ + D Y + G + A L+ A G D + T + + +++D
Sbjct: 521 NITFNVMIDLYGKAGMPERAHKALKLAQQFGSAD-------KISFSTLVHAYAKKQDFPN 573
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
E L ++ A +E + ++ Y AG+ V +L R++ + + AS +L
Sbjct: 574 MEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNIL 631
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 6/189 (3%)
Query: 95 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
SN+A Y + G E+AER + +E L Y +IT YG+ + R+ +R
Sbjct: 139 ISNVADTYGQQGKIEEAERIMDTVEESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMR 198
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 214
+I+Y MI + L A F E + N +I Y K +E
Sbjct: 199 EEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFNTLISPYGKAKDVE 258
Query: 215 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 274
+ ++ G P+ +T + Y R G +K + L D G WV +
Sbjct: 259 GIVRVITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAG------WVEETG 312
Query: 275 TIRTFMRHF 283
+ T + +
Sbjct: 313 SYGTLLHVY 321
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 132/320 (41%), Gaps = 7/320 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L +M E + S +PFN+L+ Y K G E ++ M++ + P+ TYN
Sbjct: 342 DEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNEL 401
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A ++ +M + +++ D T++ L E G+ + A R + +
Sbjct: 402 ICGFCRGKSMDRAMALLNKMV-ESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDG 460
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + + + G + E ++I SL+ +Y +I + A
Sbjct: 461 FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAA 520
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
FK + + NVMI KEG++++A L E + P T+ I +
Sbjct: 521 SLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEV 580
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
L+ D A + L + I +G + P+ T F++ + + ++ AE + +K
Sbjct: 581 LKEYDFDRANEILNRLISSG------YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNE 634
Query: 303 VDDLGVEVFEPLIRTYAAAG 322
L ++ LI Y G
Sbjct: 635 GVLLDSFIYNLLINAYGCMG 654
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 121/322 (37%), Gaps = 42/322 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E A +L M+ + + +N L+ + + ++ A++ +M S + PD TYN
Sbjct: 375 MMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYN 434
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L V + A R+ M RDG WT F+ G +A + L+ L+
Sbjct: 435 TLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWT-FNAFMVCLCRMGRVGEAHQILESLKE 493
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPN--TANI------------- 163
++ + AY LI Y + G + +++ + PN T N+
Sbjct: 494 KHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQD 553
Query: 164 ------------------SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+Y +++ ++ D A + S ++ I
Sbjct: 554 AMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIK 613
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AY +GRLE AEE+ + + G ++ + + + Y G + A L + TG
Sbjct: 614 AYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTG--- 670
Query: 266 GGKWVPSSETIRTFMRHFEQEK 287
PS T M+H EK
Sbjct: 671 ---CEPSYLTYSILMKHLVIEK 689
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 114/312 (36%), Gaps = 56/312 (17%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM---KASSIMPDSYTYNVWMRAL 66
+ +L S +N L+ ++ +++ ++ +EM +S+ P+ T N + +
Sbjct: 140 DHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY 199
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ +++ A + R D T+++L Y E+A + RNA
Sbjct: 200 CKLGNMAVARLFFVRILR-CEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA--- 255
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+Y LI + G L E W +R
Sbjct: 256 -VSYTNLIHGLCEAGKLHEALEFWARMR-------------------------------- 282
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E GC +R V++ A + GR A L R RG +PN T+ + DY + G
Sbjct: 283 --EDGCFP-TVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEG 339
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
M A+ L + ++ +G VP + I ++ + E D G G +E K
Sbjct: 340 RMDEALKMLNEMVE--KGVAPSVVPFNALIGSYCKRGMME-DAVGVLGLMESKKVC---- 392
Query: 307 GVEVFEPLIRTY 318
P +RTY
Sbjct: 393 ------PNVRTY 398
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 124/329 (37%), Gaps = 30/329 (9%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ L+ ++G + ++ EM+ P+ YTY V + L + A +++ EM
Sbjct: 293 YTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMV 352
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G VA F+ L Y + G+ E A L +E++ ++ Y LI + + ++
Sbjct: 353 EKG-VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSM 411
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + + + ++Y +I L + + A + F+ + D N
Sbjct: 412 DRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAF 471
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK---------LAVDC 254
+ + GR+ A ++ E + + N + D Y + G ++ LA +C
Sbjct: 472 MVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEEC 531
Query: 255 LEKA------IDTGRGDG------------GKW--VPSSETIRTFMRHFEQEKDVDGAEG 294
L + ID R +G K+ P+ T + +E D D A
Sbjct: 532 LPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANE 591
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
L L + V + I+ Y + GR
Sbjct: 592 ILNRLISSGYQPNVVTYTAFIKAYCSQGR 620
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 7/285 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
KA +LL KM E L + + +N L+ K G ++ M S ++PD +TY+V+
Sbjct: 431 HKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVF 490
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A + E +K G + A+ +S L Y + G L ++ +
Sbjct: 491 IDTLCKRGLVEEARSLFESLKEKG-IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI Y + N E + + A +Y +I L+ + A
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F + S + D+ + I AY GRL++AE L + +G P+ + +F D Y
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAY 669
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
R G + A L++ + G PS T ++H K
Sbjct: 670 GRFGSIDGAFGILKRMHEVG------CEPSYYTYSCLIKHLSNAK 708
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 120/302 (39%), Gaps = 11/302 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A L +M E N + + ++ + G + + +EM P+ +TY V
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +L ++ A++++ M G + + T++ L Y + GL A L +E+
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPS-VVTYNALIDGYCKKGLSASALEILSLMESN 408
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
N + Y LI + + N+ + + + R PN ++Y +I DL
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV--VTYNILIHGQCKEGDLG 466
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A K D +V I K G +E A L E + +G N +
Sbjct: 467 SAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLI 526
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
D Y + G + L+K + G VP+S T + + + +EK+ A ++I+
Sbjct: 527 DGYCKVGKVSDGRFLLDKMLSAG------CVPNSITYNSLIDGYCKEKNFKEARLLVDIM 580
Query: 300 KK 301
K
Sbjct: 581 IK 582
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 90/231 (38%), Gaps = 14/231 (6%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
G+ + N + + T E +++ +++ + D++ + + +R + +
Sbjct: 124 GYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFL 183
Query: 78 VIEEMKR------DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
+I+EMK D V + T + + + Y + G +AE + ++ D Y
Sbjct: 184 MIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYT 243
Query: 132 FLITLYGQTGNLSEVYRIWRSLRLAFPNTA----NISYLNMIQVLVNLKDLPGAEKCFKE 187
LI Y + N+ I+ L+ PN +SY N+I + + A K F +
Sbjct: 244 SLILGYCRNKNVDAANAIF----LSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQ 299
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+R V+I A + GR A + + + PN T+ +
Sbjct: 300 MHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVL 350
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+KM++ + + +++L+ L K K +I +K+S PD YN +
Sbjct: 22 LQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGFTPDLVAYNAMINVFGK 81
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V + T++S L ++YVE F +A E+ DL+
Sbjct: 82 AKLFREARSLISEMKTAG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLT 140
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ G E +++ +R +SY +++V + + A F+
Sbjct: 141 TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLM 200
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N MI Y K E A L + + RG +PN+ T+ + + G +
Sbjct: 201 QRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKL 260
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 261 DRAAMLFQKLRSSG 274
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 15/238 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS++ +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 192 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 251
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 252 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 310
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 311 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVV 365
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + D V V++ AY K + A ++ + G +FSD
Sbjct: 366 EVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGC--------VFSD 415
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 226 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 285
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 286 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 340
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I V++N L
Sbjct: 341 EVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS------NVIAVVLNAYGKL 393
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
++ A + E E GC D
Sbjct: 394 QEFDKANDVYMEMQEVGCVFSD 415
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 141/313 (45%), Gaps = 22/313 (7%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ L +M++ + + ++ ++ + +G + ++QEM I PD T++ +
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG-------LFEKAERALKE 117
AL D++ A+ +++EM G V + T + L ++G +F+ ++++ +
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSG-VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD 289
Query: 118 LENRNAHR----DLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQV 171
++ +A D+ Y LI+ G E ++ + R P+T ++Y +MI
Sbjct: 290 IDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDT--VTYSSMING 347
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
L L A + F S + +I N +I Y K G +++ EL RRG N
Sbjct: 348 LCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVAN 407
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
A T+ + + G++ ++D ++ I +G P + TIR + ++++
Sbjct: 408 AITYITLIRGFRKVGNINGSLDIFQEMISSG------VYPDTITIRNMLTGLWSKEELKR 461
Query: 292 AEGFLEILKKAVD 304
A LE L+ ++D
Sbjct: 462 ALAMLEELQMSMD 474
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 135/315 (42%), Gaps = 20/315 (6%)
Query: 2 TEKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
T A LL KM+EL ++ + +++++ K G + EM+ I PD TY+
Sbjct: 132 TVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYS 191
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + S A+R+++EM +++ D TFS L + V+ G A+ L+E+ +
Sbjct: 192 CMINGFCSSGKWSEAQRLLQEMLVR-KISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-----------MI 169
++ L+ +G L + ++++++ + + N +I
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310
Query: 170 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
L+N AE+ ++E D + MI K+ RL+ A ++ + +
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370
Query: 230 PNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV 289
PN T+ Y + G + D LE + GR V ++ T T +R F + ++
Sbjct: 371 PNIVTFNTLITGYCKAG---MVDDGLELFCEMGR---RGIVANAITYITLIRGFRKVGNI 424
Query: 290 DGA-EGFLEILKKAV 303
+G+ + F E++ V
Sbjct: 425 NGSLDIFQEMISSGV 439
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A + + M + + + FN+L+T Y K G + + EM I+ ++ TY
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE--RALKELEN 120
+R V +I+G+ + +EM G V D T N+ + GL+ K E RAL LE
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSG-VYPDTITIRNMLT-----GLWSKEELKRALAMLEE 468
Query: 121 RNAHRD 126
D
Sbjct: 469 LQMSMD 474
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 138/329 (41%), Gaps = 16/329 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 58
M+++A L + M + S + +N+++ + K G K ++ EM + PD T
Sbjct: 243 MSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVT 302
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
YN+ + AL + AE V+ +M +G D T++ + Y G ++A + +++
Sbjct: 303 YNLIIDALCKARAMDKAELVLRQMTTNG-AQPDTVTYNCMIHGYATLGRLKEAAKMFRKM 361
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN---L 175
++R ++ + + G E I+ S+ +SY ++ +
Sbjct: 362 KSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWF 421
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
D+ G F +S D RV N++I AYAK G +++A + +++G P+ T+
Sbjct: 422 ADMIGL---FNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTY 478
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD-VDGAEG 294
+ R G + A++ + + G P++ + ++ F V E
Sbjct: 479 STVISAFSRMGRLTDAMEKFNQMVARG------IQPNTAVYHSIIQGFCMHGGLVKAKEL 532
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
E++ K + + F +I + GR
Sbjct: 533 VSEMINKGIPRPDIVFFNSVINSLCKDGR 561
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 2/257 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
L MK + FN L+ YAK G + I EM+ + PD TY+ + A
Sbjct: 426 GLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAF 485
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR- 125
+ + ++ A +M G + + + ++ + G KA+ + E+ N+ R
Sbjct: 486 SRMGRLTDAMEKFNQMVARG-IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D+ + +I + G + + + I+ + I++ ++I + + A K
Sbjct: 545 DIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKIL 604
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
E DI + ++ Y K GR+ + L +R+G PN T+ I R
Sbjct: 605 DAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Query: 246 GDMKLAVDCLEKAIDTG 262
G A + I++G
Sbjct: 665 GRTVAARKKFHEMIESG 681
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 132/367 (35%), Gaps = 76/367 (20%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A + +M++ + + ++++++ +++ G +M A I P++ Y+
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYH 514
Query: 61 VWMRALAA--------------VN------DISGAERVIEEMKRDGRVA----------- 89
++ +N DI VI + +DGRV
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTD 574
Query: 90 ----ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
D TF++L Y G +KA + L +E D+ Y L+ Y + G +++
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND 634
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESG------------- 191
++R ++ ++Y M+ L A K F E ESG
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694
Query: 192 ------CA---------------TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
CA + I + N MI A K R E A+EL G P
Sbjct: 695 GLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLP 754
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
N T+ + L++G ++ A + +G VP S + +R ++ ++
Sbjct: 755 NESTYGVMIINLLKDGAVEDANNMFSSMEKSG------IVPGSRLLNRIIRMLLEKGEIA 808
Query: 291 GAEGFLE 297
A +L
Sbjct: 809 KAGNYLS 815
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 106/307 (34%), Gaps = 48/307 (15%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM----KRDGRVAADWT 93
E + ++ M +P+ ++Y++ ++ L D S ++R ++ K G + +
Sbjct: 210 EAVNVLLHRMSELGCVPNVFSYSIILKGLC---DNSMSQRALDLFQMMAKEGGACSPNVV 266
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
++ + + + G KA E+ + D+ Y +I
Sbjct: 267 AYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLII------------------- 307
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
L + + AE ++ + A D N MI YA GRL
Sbjct: 308 ----------------DALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRL 351
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 273
+ A ++ + + RG PN F ++G K A + D+ G K P
Sbjct: 352 KEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAE----IFDSMTAKGHK--PDI 405
Query: 274 ETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLK 333
+ T + + E G +K VF LI YA G ML +
Sbjct: 406 VSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTE 465
Query: 334 MEKVEVS 340
M++ VS
Sbjct: 466 MQQQGVS 472
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L +K+ +N+ FS N+++ K E+ + + AS ++P+ TY V
Sbjct: 703 DEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVM 762
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A + M++ G V + + + +E G KA L +++ +
Sbjct: 763 IINLLKDGAVEDANNMFSSMEKSGIVPGSR-LLNRIIRMLLEKGEIAKAGNYLSKVDGKR 821
Query: 123 AHRDLSAYQFLITLYGQTGNLSE 145
+ S +++L+ + G E
Sbjct: 822 ILLEASTTSLMLSLFSRKGKYHE 844
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 106/240 (44%), Gaps = 1/240 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL ++++ L + +N+L++ +++ + E + ++M AS PD +TYN +
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHG 339
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AER+ E+ G D T+++L + + G +K E ++L ++
Sbjct: 340 RCGKAEEAERLFRELVEKG-FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNE 398
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +YG+ G L ++ +R ++Y MI L + + A K ++
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLED 458
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + +I AYAK GR +AE + G P+ + + D + R+GD
Sbjct: 459 MTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGD 518
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 6/258 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI--IQEMKASSIMPDSYTYN 60
+ A LL+ M + + + FN+L+ +K+G A+ + E++ S + PD TYN
Sbjct: 238 DDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYN 297
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + +++ A V E+M D T++ + S++ G E+AER +EL
Sbjct: 298 TLISACSQSSNLEDAVTVFEDMIA-SECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVE 356
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D Y L+ + + GN+ +V L A I+Y MI + + L
Sbjct: 357 KGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDL 416
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E + T D VMI + K R+ A ++ E G P +
Sbjct: 417 AVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALIC 476
Query: 241 YYLRNG---DMKLAVDCL 255
Y + G D + DC+
Sbjct: 477 AYAKGGRRADAENTFDCM 494
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 9/250 (3%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG--A 75
G + FN++M +YA++G + ++ M I PD ++N + A + ++ A
Sbjct: 218 GATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVA 277
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
++ E+++ G + D T++ L S ++ E A +++ DL Y +++
Sbjct: 278 LDLLFEVRQSG-LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVS 336
Query: 136 LYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEK-CFKEWESGC 192
++G+ G E R++R L + P+ I+Y +++ ++ E C + ++G
Sbjct: 337 VHGRCGKAEEAERLFRELVEKGFMPDA--ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGF 394
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
+I N MI Y K GRL+ A L + R G P+A T+ + D + + A
Sbjct: 395 KKNEI-TYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAG 453
Query: 253 DCLEKAIDTG 262
LE D G
Sbjct: 454 KVLEDMTDAG 463
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 95/235 (40%), Gaps = 1/235 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
++E+++++N S L+ +AK G ++ I MKA+ +P+ + Y + L
Sbjct: 837 VVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLC 896
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
N E +I EM+ G D + L ++Y AG F++ + + + D
Sbjct: 897 HHNRFRDVELMIAEMEGAG-FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDE 955
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI +Y ++ E + + + SY +++ + A++ F+E
Sbjct: 956 DTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEE 1015
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
S + + ++M+ Y G AE L + G +P T I Y
Sbjct: 1016 MRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSY 1070
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 138/349 (39%), Gaps = 49/349 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L++ +++ + G +N+L+ YA++G EK A+ M + +P + N
Sbjct: 763 QQAEILVKGLRQAS-GIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGM 821
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
MRAL DGR L +YV ++EL++ N
Sbjct: 822 MRALIV----------------DGR----------LDELYV----------VVEELQDMN 845
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
S L+ + + G++ EV +I+ ++ A PN Y +MI +L +
Sbjct: 846 FKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMH--LYRSMISLLCHHNRFRD 903
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E E E D+ + N ++ Y G + ++ G +P+ T+
Sbjct: 904 VELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIV 963
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y R+ + L + G P ++ ++ + + + + A+ E ++
Sbjct: 964 MYCRSFRPEEGFTLLNEMGKRG------LTPKLQSYKSLLAASAKAELREQADQIFEEMR 1017
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
L ++ +++ Y AG S +L +K + +E + A+ +L
Sbjct: 1018 SKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHIL 1066
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 78/215 (36%), Gaps = 36/215 (16%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ +Y ++ PE+ ++ EM + P +Y + A A A+++ EEM
Sbjct: 958 YNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEM- 1016
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R + + + + IY AG KAE L ++ ++ L+T YG G
Sbjct: 1017 RSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQP 1076
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + +L+ + + + Y + +
Sbjct: 1077 REAENVLNNLKSSSLEVSTLPY-----------------------------------STV 1101
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
AY K G + +R G +P+ + W F
Sbjct: 1102 FDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCF 1136
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL MKE + + + LMT Y G P + ++ +K+SS+ + Y+
Sbjct: 1043 KAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVF 1102
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 101
A D + + EMKRDG V D WT F AS+
Sbjct: 1103 DAYLKNGDYNHGTTKLLEMKRDG-VEPDHQVWTCFIRAASL 1142
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ LL +M + L + SL+ AK E+ I +EM++ S + Y++
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMM 1031
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ + S AE ++ MK DG + T L + Y AG +AE L L++ +
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDG-IEPTIATMHILMTSYGTAGQPREAENVLNNLKSSS 1090
Query: 123 AHRDLSAYQFLITLYGQTGN 142
Y + Y + G+
Sbjct: 1091 LEVSTLPYSTVFDAYLKNGD 1110
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F + AT ++V N M+G YA+ GR ++A +L + RG DP+ ++ +
Sbjct: 207 AEEVFLRFAGEGAT--VQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLIN 264
Query: 241 YYLRNGDMKLAV 252
++G + V
Sbjct: 265 ARSKSGCLAAGV 276
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/320 (19%), Positives = 136/320 (42%), Gaps = 7/320 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L++M++ ++ +N L YA+ G E+ + M + ++P+++TYN M A
Sbjct: 301 VLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYG 360
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ + A + ++MK+ G V + T++ + + + F L E+ +
Sbjct: 361 NIGKVDEALALFDQMKKSGCV-PNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNR 419
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ ++ + G+ G V R+ ++ + +Y +I A K + E
Sbjct: 420 VTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNE 479
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
S + N ++ +++G A+ + + R +G PN +++ + Y + G+
Sbjct: 480 MTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGN 539
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
+ +D +EK + GG PS +RT + + + + G E + +K +
Sbjct: 540 IA-GIDAIEKEV-----YGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPD 593
Query: 308 VEVFEPLIRTYAAAGRTSPV 327
+ +F ++ YA G S V
Sbjct: 594 LVIFNSMLSMYAKNGMYSKV 613
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 36/229 (15%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
ALL++M+ + ++++ + G ++ A +++KA P TYN ++
Sbjct: 230 ALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVF 289
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ + A RV++EM++DG D T++ LA Y AG +E+A + L + ++ +
Sbjct: 290 GKAGNYTEALRVLKEMEQDG-CQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPN 348
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
Y ++T YG G + E ++ ++
Sbjct: 349 AFTYNTVMTAYGNIGKVDEALALFDQMK-------------------------------- 376
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+SGC ++ N ++G K+ R E+ R G PN TW
Sbjct: 377 --KSGCVP-NVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 422
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 99/219 (45%), Gaps = 1/219 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ + ++ G +I+ +M+ P+ +Y++ ++ A +I+G + IE+
Sbjct: 492 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGID-AIEKEV 550
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V W L + E+A +E++ R + DL + ++++Y + G
Sbjct: 551 YGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMY 610
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
S+V I+ S++ + + I+Y +++ + + AEK + +S D+ N +
Sbjct: 611 SKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTV 670
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
I + K+G ++ A+ + G P T+ Y
Sbjct: 671 INGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGY 709
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M K + + +K+ L + +NSLM +YAK + I+ ++K+S + PD +YN
Sbjct: 609 MYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYN 668
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ I A+R++ EM DG +A T+ L Y +F +A + +
Sbjct: 669 TVINGFCKQGLIKEAQRILSEMIADG-MAPCVVTYHTLVGGYASLEMFSEAREVINYMIQ 727
Query: 121 RN 122
N
Sbjct: 728 HN 729
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 119/310 (38%), Gaps = 28/310 (9%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV-----------WMRALAAVNDI 72
+ +++ ++ G E+ + E++ + P TYNV W R +A
Sbjct: 176 YTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVA----- 230
Query: 73 SGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
+++EM+ G D+T + +A+ GL ++A ++L+ R + Y
Sbjct: 231 -----LLDEMRAAGVEPDDFTASTVIAAC-CRDGLVDEAVAFFEDLKARGHTPCVVTYNA 284
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
L+ ++G+ GN +E R+ + + ++Y + A KC S
Sbjct: 285 LLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKG 344
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
+ N ++ AY G+++ A L ++ ++ G PN T+ + + +
Sbjct: 345 LLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVML 404
Query: 253 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 312
+ L + +G P+ T T + + D LE +K +L + +
Sbjct: 405 EMLGEMSRSG------CTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYN 458
Query: 313 PLIRTYAAAG 322
LI Y G
Sbjct: 459 TLIAAYGRCG 468
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 117/310 (37%), Gaps = 27/310 (8%)
Query: 13 KELNLGFSSMPFNSLMTLYAKTGH---PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
+ L L SS P +L A P IP++++ ++ S + W A A
Sbjct: 76 QALVLAISSHPLPTLPAFLASRRDELLPADIPSLLKALELSGHWEWALALLRWAGAEGAA 135
Query: 70 NDISGAERVIEEMKRDGRVAA----------------DWTTFSNLASIYVEAGLFEKAER 113
D S E V+ + R+G+ A D ++ + AG +E+A
Sbjct: 136 -DASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVE 194
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTG-NLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
EL + L Y ++ +YG+ G + + + +R A + + +I
Sbjct: 195 LFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAAC 254
Query: 173 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
+ A F++ ++ T + N ++ + K G A + + + G P+A
Sbjct: 255 CRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDA 314
Query: 233 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
T+ + Y R G + A CL+ G +P++ T T M + VD A
Sbjct: 315 VTYNELAGTYARAGFYEEAAKCLDTMTSKG------LLPNAFTYNTVMTAYGNIGKVDEA 368
Query: 293 EGFLEILKKA 302
+ +KK+
Sbjct: 369 LALFDQMKKS 378
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D+R ++ A ++ GR E A EL RR+G P T+ + D Y R G + L
Sbjct: 172 DVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVAL 231
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
+D R G + P T T + ++ VD A F E LK V + L+
Sbjct: 232 ---LDEMRAAGVE--PDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALL 286
Query: 316 RTYAAAGRTSPVMLRRLK 333
+ + AG + LR LK
Sbjct: 287 QVFGKAGNYTEA-LRVLK 303
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 7/276 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + +++ + +L + + FN+L+ Y K G+ ++ + +M+ S PD +TY+ +
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
AL N + GA + +EM + G + D F+ L + G + + + +++ ++
Sbjct: 319 ALCKENKMDGAHGLFDEMCKRGLIPND-VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ Y L+ + + G+L I + I+Y +I D+ A +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
KE + D + ++ KEGR+ +AE R G P+ T+ + D + +
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
GD + L++ + DG VPS T +
Sbjct: 498 KGDAQTGFKLLKEM----QSDG--HVPSVVTYNVLL 527
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 102/245 (41%), Gaps = 1/245 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M + L + + F +L+ +++ G + + Q+M + + PD YN
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ A +++ M R G + D T++ L + G E A KE++
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRG-LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + L+ + G + + R R + A +++Y M+ D
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K KE +S + NV++ K G+++NA+ L + G P+ T+ + +
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
Query: 243 LRNGD 247
R+ +
Sbjct: 566 HRHAN 570
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A + ++M + + + F++L+ K G ++EM + I PD TY +
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A D ++++EM+ DG V + T++ L + + G + A+ L + N
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPS-VVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVY 147
D Y L+ + + N S+ Y
Sbjct: 550 GVVPDDITYNTLLEGHHRHANSSKRY 575
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Query: 118 LENRNAHRDLSAYQF--LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNL 175
+E +A L+ Y F L+ + + GN+S+ +++ + +S+ +I +
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+L + + E D+ + +I A KE +++ A L + +RG PN +
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ RNG++ L + +K + G
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKG 375
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+++A LLE+M L ++ + L+ ++K GH ++ M ++++PD + YN
Sbjct: 471 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNS 530
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ L+ V I AE ++++ G V D T+S L Y + EKA++ L+++ N
Sbjct: 531 LIKGLSTVGRIEEAEEYYAQVQKRGLVP-DEFTYSGLIHGYCKTRNLEKADQLLQQMLNS 589
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y L+ Y ++ + +V I +S+ + N Y +I+ L +++ A
Sbjct: 590 GLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 649
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E E D+ + + +I K +E A L + + G +P + D
Sbjct: 650 FMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 709
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ R+GD+ A + + + G
Sbjct: 710 FCRSGDISRARNVFDSILAKG 730
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 13/327 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA+ LL++M L ++ + L+ Y K+ EK+ +I+Q M S PD++ Y +
Sbjct: 577 EKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIV 636
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R L+ ++ A V+ E++++G V D +S+L S + EKA L E+
Sbjct: 637 IRNLSRSENMEVAFMVLTEVEKNGLV-PDLHIYSSLISGLCKMADMEKAVGLLDEMAKEG 695
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y LI + ++G++S ++ S+ + PN ++Y +I D+
Sbjct: 696 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNC--VTYTALIDGNCKNGDITD 753
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A +K+ D V NV+ + LE A L E RG + +
Sbjct: 754 AFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVR 812
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE-KDVDGAEGFLEIL 299
+ + G ++ L +D + VP+++T+ + F + K + F E+
Sbjct: 813 GFCKRGRLQETEKLLHVMMDR------EIVPNAQTVENVITEFGKAGKLCEAHRVFAELQ 866
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSP 326
+K + F L G P
Sbjct: 867 QKKASQSSTDRFSLLFTDMINKGLIPP 893
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 97/250 (38%), Gaps = 34/250 (13%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR---------------------- 84
M+ + I PD YTY+ ++ A D A++V EEM+R
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 85 ------------DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
D ++ D T+ L + + G ++A+ L E+ ++ Y
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
L+ + + G +E + I + A I Y N+I+ L + L A K E
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
D + ++ + + + A EL R G PNA T+ I + +NG+ K A
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475
Query: 253 DCLEKAIDTG 262
+ LE+ I G
Sbjct: 476 NLLEEMISEG 485
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 102/254 (40%), Gaps = 1/254 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A+ + E+M+ + + + +N +++ ++G E+ +EM + PD++TY
Sbjct: 262 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGAL 321
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L + A+ +++EM G + + ++ L +++ G +A L E+ +
Sbjct: 322 MNGLCKGGRLKEAKALLDEMSCSG-LKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAG 380
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + G L ++ + +Y ++Q D GA
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAF 440
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E + + +MI + G + A L E G PNA + +
Sbjct: 441 ELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 500
Query: 243 LRNGDMKLAVDCLE 256
+ G + LA + LE
Sbjct: 501 SKEGHISLACESLE 514
>gi|356526577|ref|XP_003531893.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 878
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 14/299 (4%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI-PAIIQEMKASSIMPDSYTYNVWMRAL 66
LL +M+ +G +N+ + K G + AI EM A +I P+ TY+ M
Sbjct: 318 LLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNIWPNVVTYSTLMAGY 377
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A + +EMK + D +++ L +Y G FE+A KE+E D
Sbjct: 378 SKAERFEDALNIYDEMKHL-LIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKND 436
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y LI YG+ EV +++ + R +PN +++Y +I++ + A
Sbjct: 437 VVTYNALIEGYGRHNKYVEVQKLFDEMKARRIYPN--DLTYSTLIKIYTKGRMYAEAMDV 494
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
++E + D+ + +I A K G +E++ L + +G+ PN T+ D + +
Sbjct: 495 YRELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAF-K 553
Query: 245 NGDMKLAVDCLEKAIDTG-RGDGGKWVPSSETIRTFMRHFEQEK-DVDGAEGFLEILKK 301
G A++C A+DT + + + PSS R + +F+ +K D+ + +++L++
Sbjct: 554 IGQQLPALEC---AVDTPFQANEHQIKPSSS--RLIVGNFQDQKTDIGNNDEIMKMLEQ 607
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 100/243 (41%), Gaps = 3/243 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVW 62
+A +LL M + L + + +N+++ AK E + ++EM A+ MPD TYN
Sbjct: 243 EAVSLLRSMGKFGLEPNLVTYNAIIDAGAKGELTFEIVVKFLEEMIAAGCMPDRLTYNSL 302
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK-ELENR 121
++ A ++ EM+ G + D T++ + G + A A+ E+ +
Sbjct: 303 LKTCVAKGRWKLCRDLLAEMEWKG-IGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAK 361
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N ++ Y L+ Y + + I+ ++ +SY ++ + NL A
Sbjct: 362 NIWPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEA 421
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
FKE E D+ N +I Y + + ++L + + R PN T+
Sbjct: 422 VGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVQKLFDEMKARRIYPNDLTYSTLIKI 481
Query: 242 YLR 244
Y +
Sbjct: 482 YTK 484
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 5/182 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + ++MK L + + +N+L+ LYA G E+ +EM+ I D TYN
Sbjct: 384 EDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNAL 443
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N +++ +EMK R+ + T+S L IY + ++ +A +EL+
Sbjct: 444 IEGYGRHNKYVEVQKLFDEMKAR-RIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEG 502
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI + G + R+ + + + PN ++Y ++I + LP
Sbjct: 503 MKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNV--VTYNSIIDAFKIGQQLPA 560
Query: 181 AE 182
E
Sbjct: 561 LE 562
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
+++ E+ + +S F + +++ G+ E+ ++ ++M+ + P + + +
Sbjct: 729 QRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRE 788
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
AE +++++K+ G + D ++++ S+Y + G + KA K ++ D +
Sbjct: 789 TVEIDAEELVKDIKKAG-LELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATT 847
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS-YLNMIQVLVNLKDLPGAEKCFKEW 188
+ LI LY + + E + R + + N NIS Y +I L+ AE FK
Sbjct: 848 FNTLIMLYSRNQMVQEAQALLREM-IKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSI 906
Query: 189 -ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
E+GC D NVMI Y K G EE+ E+ + G +P+ T + D Y + G
Sbjct: 907 AETGCKP-DATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGA 965
Query: 248 MKLAVDCLEKAIDTG 262
A + LE + G
Sbjct: 966 TGKAEEVLETLPEIG 980
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 37/242 (15%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI-PAIIQEMKASSIMPDSYTYNVWMR 64
+ LL +M++ + FN ++ + G E + +++Q++ A+ + PD+ TYN +
Sbjct: 134 QQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLIS 193
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + N +S A + EEM+R G W T++ + S+Y AG E A + ++ +
Sbjct: 194 ACSLNNRLSDAILIFEEMQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQEQGFT 252
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y ++ + + G + EV RI +R A ++ I+Y
Sbjct: 253 PDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY------------------- 293
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
N MI Y K G AEEL + + G P++ T+ + D +
Sbjct: 294 ----------------NTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGK 337
Query: 245 NG 246
G
Sbjct: 338 AG 339
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 1/258 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A ++ +M+E S F +L+ LY++ +++++K + + D YN
Sbjct: 757 EEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHM 816
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A V + M+ G + D TTF+ L +Y + ++A+ L+E+
Sbjct: 817 ISLYSKLGSYRKAALVFKGMQEIG-CSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTG 875
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++S Y LI+ YG+ + +++S+ +Y MI V + E
Sbjct: 876 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 935
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ ++ ++ + ++++ +Y K G AEE+ E G P+A + + +
Sbjct: 936 EVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSH 995
Query: 243 LRNGDMKLAVDCLEKAID 260
L N D AV L K D
Sbjct: 996 LNNKDYLSAVIWLRKMTD 1013
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA + + M+E+ + FN+L+ LY++ ++ A+++EM + P+ TY +
Sbjct: 828 KAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLI 887
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A + AE V + + G D T ++ + ++Y +AG K E +++++
Sbjct: 888 SAYGRLQAYEDAELVFKSIAETG-CKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGF 946
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
L+ L+ YG+ G + + +L + I Y ++I +N KD A
Sbjct: 947 EPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVI 1006
Query: 184 CFKEWESGCATYDIRVTNVMIGAY 207
++ C +R T+V I +
Sbjct: 1007 WLRKMTDAC----VRPTHVTITCF 1026
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/332 (18%), Positives = 132/332 (39%), Gaps = 42/332 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS------------ 50
+ AE + ++ ++ +++L++ YA+TG+ E+ + M A+
Sbjct: 652 QNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYV 711
Query: 51 -----------------------SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 87
I P+S T+ V A + ++ A + +M+ G
Sbjct: 712 LEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAG- 770
Query: 88 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
+ F L ++Y + AE +K+++ D+ Y +I+LY + G+ +
Sbjct: 771 FSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAA 830
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
+++ ++ + ++ +I + + + A+ +E +I +I AY
Sbjct: 831 LVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAY 890
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
+ E+AE + + G P+A + + + Y + G+ + +E+ I+ + DG
Sbjct: 891 GRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRK----IEEVIEQMKADG- 945
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ PS TI M + + AE LE L
Sbjct: 946 -FEPSLTTIHMLMDSYGKGGATGKAEEVLETL 976
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 1/240 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +LL+ + L ++ +N+L++ + I +EM+ PD +TYN +
Sbjct: 169 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMIS 228
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A + M+ G D T++++ + G E+ ER + +
Sbjct: 229 VYGRAGRVEAASSIFRIMQEQG-FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 287
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y +I +YG+ G + ++ ++ ++++ +I L + A
Sbjct: 288 SDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAM 347
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F++ ++ + MI AYAK +AE R G P+ + + D + +
Sbjct: 348 FEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFK 407
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 121/309 (39%), Gaps = 43/309 (13%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
E ++G +NSLM++YA+ G + ++ M+ PD T+N+ ++A
Sbjct: 107 ESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQE 166
Query: 74 G-AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
G A +++++ G + D T++ L S A +E++ + D+ Y
Sbjct: 167 GLASSLLQDVYAAG-LRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNA 225
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
+I++YG+ G + I+R ++ E+ F
Sbjct: 226 MISVYGRAGRVEAASSIFRIMQ---------------------------EQGF------- 251
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
T D N ++ A+A++GR+E E ++ R + T+ Y + G + A
Sbjct: 252 -TPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAE 310
Query: 253 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 312
+ + + GR P S T + + V+ A E + K+ ++ F
Sbjct: 311 ELYVQMKEEGR------CPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFS 364
Query: 313 PLIRTYAAA 321
+I YA A
Sbjct: 365 AMICAYAKA 373
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 52/314 (16%)
Query: 75 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
AE V +++R G A + + +S L S Y E G FE+A RAL + + + +++
Sbjct: 654 AEIVFRDLQRHG-FAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVL 712
Query: 135 TLYGQTGN---LSEVY------------RIWRSLRLAFPNTANIS-----YLNM------ 168
+G+ G LSE Y R + + AF N+ Y M
Sbjct: 713 EAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFS 772
Query: 169 --IQVLVNLKDLPG-------AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
IQV L L AE+ K+ + D+ + N MI Y+K G A +
Sbjct: 773 PSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALV 832
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 279
+ + G P+A T+ Y RN ++ A L + I TG P+ T T
Sbjct: 833 FKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNA------PNISTYTTL 886
Query: 280 MRHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAAAGRTSPV--MLRRLK 333
+ + + + + A E++ K++ + G + + +I Y AG + ++ ++K
Sbjct: 887 ISAYGRLQAYEDA----ELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMK 942
Query: 334 MEKVEVSEASKKLL 347
+ E S + +L
Sbjct: 943 ADGFEPSLTTIHML 956
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 91/223 (40%), Gaps = 7/223 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A ++ M+E ++ +NS++ +A+ G E++ I M+ + D TYN
Sbjct: 236 VEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNT 295
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AE + +MK +GR D TF+ L +AG +A +++
Sbjct: 296 MIHMYGKAGMHRKAEELYVQMKEEGR-CPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKS 354
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L A+ +I Y + S+ + + A ++Y M+ V ++P
Sbjct: 355 QVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFK-AEMP-- 411
Query: 182 EKC---FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
EKC +K ++ V +M+ + ++ L E L +
Sbjct: 412 EKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSK 454
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KAE L +MKE S+ F L+ K G + A+ ++M S + P ++
Sbjct: 305 MHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFS 364
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + S AE M R G V D +S + ++ +A + EK K +
Sbjct: 365 AMICAYAKADMFSDAEHTYSCMLRAG-VRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVG 423
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEV 146
+LS Y ++ ++ Q +L+E+
Sbjct: 424 SGLKPELSVYAIMVRVFYQKSSLAEI 449
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A+ALL +M + + + +L++ Y + E + + + + PD+ YN
Sbjct: 860 MVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYN 919
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + + E VIE+MK DG TT L Y + G KAE L+ L
Sbjct: 920 VMINVYRKAGEHRKIEEVIEQMKADG-FEPSLTTIHMLMDSYGKGGATGKAEEVLETLPE 978
Query: 121 RNAHRDLSAYQFLI 134
D Y +I
Sbjct: 979 IGMSPDAIHYTSII 992
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 120/272 (44%), Gaps = 7/272 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI-MPDSYTYNVWMRAL 66
L+ +LNL ++ FN L+ + + G + +++EMK++ + P+ TY+ + L
Sbjct: 177 LVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGL 236
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A EEM + D T++ L + + + G ++A L+ +++ +
Sbjct: 237 CENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPN 296
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y L+ Y + G L E ++ ++ ISY +I L + A + +
Sbjct: 297 VFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQ 356
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ + D NVM+G +EGR + A ++ ++ G N ++ I ++ + G
Sbjct: 357 QMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKG 416
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 278
+++ A + L ++ G +VP T T
Sbjct: 417 ELRKATELLGLMLNRG------FVPHHATSNT 442
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A +LE MK + ++ LM Y K G ++ + E+K+ + PD+ +Y
Sbjct: 278 VDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTT 337
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + A ++++MK D AD TF+ + G F++A +++L
Sbjct: 338 LINCLCRTGRVDEATELLQQMK-DKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFE 396
Query: 122 NAHRDLSAYQFLITLYGQTGNL 143
+ + +Y+ ++ Q G L
Sbjct: 397 GFYLNKGSYRIVLNFLTQKGEL 418
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 105/262 (40%), Gaps = 36/262 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E E E + + N+ ++ +N L+ + + G ++ I++ MK++ P+ + Y+
Sbjct: 242 LKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYS 301
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V M + A+ V E+K G + D +++ L + G ++A L+++++
Sbjct: 302 VLMNGYCKEGRLQEAKEVFNEIKSLG-MKPDTISYTTLINCLCRTGRVDEATELLQQMKD 360
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ D + ++ + G E L+M+Q LP
Sbjct: 361 KDCRADTVTFNVMLGGLCREGRFDEA-------------------LDMVQ------KLP- 394
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F+ + +Y I ++ ++G L A EL RG P+ T
Sbjct: 395 ----FEGFYLNKGSYRI-----VLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLL 445
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
NG +K AV+ L ++ G
Sbjct: 446 LLCNNGMVKDAVESLLGLLEMG 467
>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
Length = 808
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 6/230 (2%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
NSL+ + GH +IP +I+ M+ + PD TY + + D+ ++ +++
Sbjct: 325 NSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILG 384
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G + + T+S L + + GLF + E L E+ + D+ AY LI Y + G +
Sbjct: 385 QG-MELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIG 443
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY---DIRVTN 201
++W + + +N + +L+ L ++ E+ + Y D+ + N
Sbjct: 444 RALQVWN--LMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYN 501
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
V+I YAK G + NA +L + G P T Y + GD+ +A
Sbjct: 502 VVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMA 551
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 145/355 (40%), Gaps = 42/355 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
A A E M+ + ++ F SL+ YA + ++EMK+ + TY++
Sbjct: 281 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSIL 340
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-- 120
+ A +ND A+ + +E K + + +SN+ + ++G E+AE ++E+E
Sbjct: 341 ISGFAKINDSQSADNLFKEAKTK-LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDG 399
Query: 121 ------------------RNAHRDLS---------------AYQFLITLYGQTGNLSEVY 147
+N ++ L +Y L+ LY + G +++
Sbjct: 400 IDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKAL 459
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
I + + N +Y +I ++L D A F+E D + N++I A+
Sbjct: 460 SISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAF 519
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
K G ++ A + E+ ++ P+ + + + Y GDMK A+D L+ +G
Sbjct: 520 CKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG----- 574
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
VP+ T + ++ V A L+ + A + ++R YAA+G
Sbjct: 575 -CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 628
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 110/258 (42%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A+ E+M L +N L+ + K G+ ++ I+++M+ + P + + +
Sbjct: 493 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 552
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A D+ A ++ M+R G V T++ L V ++A L ++
Sbjct: 553 GYAVAGDMKSALDTLDLMRRSGCVPT-VMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 611
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y ++ Y +G++ + + + ++ + Y +++ + A
Sbjct: 612 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 671
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E + + N++I +A+ G + AE+L ++ + G PN T+ + + +
Sbjct: 672 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 731
Query: 245 NGDMKLAVDCLEKAIDTG 262
GDM+ A +E+ +D G
Sbjct: 732 AGDMQRAEKVIEEMVDVG 749
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 1/249 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + E++KE S + + L+ LY K G K +I +EM++ I ++ TY++ +
Sbjct: 422 KCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLI 481
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++D + A + EEM R G + D ++ L + + G ++A L++++
Sbjct: 482 NGFIHLHDFANAFAIFEEMLRSG-LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERM 540
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
A++ +I Y G++ +R + ++Y +I LV + A
Sbjct: 541 QPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVS 600
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ T + +++ YA G + A E + + G + +E
Sbjct: 601 VLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACC 660
Query: 244 RNGDMKLAV 252
++G M+ A+
Sbjct: 661 KSGRMQSAL 669
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 127/337 (37%), Gaps = 44/337 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L+ +M+E + ++S+M Y + K + + +K P +Y
Sbjct: 386 ERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCL 445
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ A + +EM+ G + + T+S L + ++ F A +E+
Sbjct: 446 LNLYVKIGKVAKALSISKEMESCG-IKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 504
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + Y LI + + GN+ I ++ +N ++ +I+
Sbjct: 505 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE------------ 552
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
YA G +++A + + RR G P T+
Sbjct: 553 -----------------------GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 589
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+R ++ AV L+K G P+ T MR + D+ A + +K++
Sbjct: 590 VRKHKVQRAVSVLDKMSIAG------ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 643
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVM--LRRLKMEKV 337
L V ++E L+R +GR + R + +K+
Sbjct: 644 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 680
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA K+KE L + +L+ K+G + A+ +EM I +++ YN+ +
Sbjct: 632 KAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 691
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A D+ AE ++++MK DG V + T+++ + +AG ++AE+ ++E+ +
Sbjct: 692 DGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 750
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
++ Y LI + + + + ++LA SY ++ L++
Sbjct: 751 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLS 801
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A+ +M + ++ +N L+ +A+ G + ++++MK + P+ +TY +
Sbjct: 666 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSY 725
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A D+ AE+VIEEM G + + T++ L + L ++A + +E++
Sbjct: 726 INACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG 784
Query: 123 AHRDLSAYQFLIT 135
D ++Y L+T
Sbjct: 785 LKPDEASYHCLVT 797
>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
Length = 807
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
NSL+ + GH +IP +I+ M+ + PD TY + + D+ R+ +++
Sbjct: 324 NSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILG 383
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G + + T+S L + + GLF + E E+ + D+ AY LI + + G +
Sbjct: 384 QG-IELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIG 442
Query: 145 EVYRIWRSLRLA---FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
++W + + P + N +++++ L L A + S D+ + N
Sbjct: 443 RALQVWNLMCCSQRVIPTSVN--HVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYN 500
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
V+I YAK G + NA +L + G P T Y + GD+ +A
Sbjct: 501 VVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMA 550
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 116/332 (34%), Gaps = 47/332 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E L E KE M FN+LM+ G + ++ M + P +TY+
Sbjct: 232 EALSFLQETRKEGKFKPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTI 291
Query: 63 MRALAAVNDISGAERVIE----------------------------------EMKRDGRV 88
+ L V ++ A + + EM R V
Sbjct: 292 IHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGV 351
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
D T++ L + + E G E+ R K++ + ++ Y LI + G EV
Sbjct: 352 EPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALFKKGLFYEVEN 411
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV----MI 204
++ + I+Y +I L ++ A + W C + + T+V ++
Sbjct: 412 LFGEICSIGLELDVIAYSILIHGFCKLGEIGRA---LQVWNLMCCSQRVIPTSVNHVSIL 468
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
K+G L+ A E + + + + D Y + GD+ AV + I G
Sbjct: 469 LGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGM- 527
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
P+ T + + + + D+ AE +
Sbjct: 528 -----CPTIVTCNSLLYGYCKFGDLHMAESYF 554
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
NSL+ Y K G + ++ S ++P + TY M AL+ + + +EM
Sbjct: 535 NSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTG 594
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G + + T+S + + +F A+ L ++ D Y LI + +T +
Sbjct: 595 KG-IRPNAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAK 653
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+ ++ + + ++Y ++ VL
Sbjct: 654 NAFYVYELMVCRGVMPSPVTYNLLVNVLC 682
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 106/240 (44%), Gaps = 1/240 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL ++++ L + +N+L++ +++ + E + ++M AS PD +TYN +
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHG 339
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AER+ E+ G D T+++L + + G +K E ++L ++
Sbjct: 340 RCGKAEEAERLFRELVEKG-FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNE 398
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I +YG+ G L ++ +R ++Y MI L + + A K ++
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLED 458
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + +I AYAK GR +AE + G P+ + + D + R+GD
Sbjct: 459 MTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGD 518
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 6/258 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI--IQEMKASSIMPDSYTYN 60
+ A LL+ M + + + FN+L+ +K+G A+ + E++ S + PD TYN
Sbjct: 238 DDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYN 297
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + +++ A V E+M D T++ + S++ G E+AER +EL
Sbjct: 298 TLISACSQSSNLEDAVTVFEDMIA-SECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVE 356
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D Y L+ + + GN+ +V L A I+Y MI + + L
Sbjct: 357 KGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDL 416
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E + T D VMI + K R+ A ++ E G P +
Sbjct: 417 AVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALIC 476
Query: 241 YYLRNG---DMKLAVDCL 255
Y + G D + DC+
Sbjct: 477 AYAKGGRRADAENTFDCM 494
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 9/250 (3%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISG--A 75
G + FN++M +YA++G + ++ M I PD ++N + A + ++ A
Sbjct: 218 GATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVA 277
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
++ E+++ G + D T++ L S ++ E A +++ DL Y +++
Sbjct: 278 LDLLFEVRQSG-LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVS 336
Query: 136 LYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEK-CFKEWESGC 192
++G+ G E R++R L + P+ I+Y +++ ++ E C + ++G
Sbjct: 337 VHGRCGKAEEAERLFRELVEKGFMPDA--ITYNSLLYAFAKEGNVDKVEHTCEQLVKAGF 394
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
+I N MI Y K GRL+ A L + R G P+A T+ + D + + A
Sbjct: 395 KKNEI-TYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAG 453
Query: 253 DCLEKAIDTG 262
LE D G
Sbjct: 454 KVLEDMTDAG 463
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 95/235 (40%), Gaps = 1/235 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
++E+++++N S L+ +AK G ++ I MKA+ +P+ + Y + L
Sbjct: 837 VVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLC 896
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
N E +I EM+ G D + L ++Y AG F++ + + + D
Sbjct: 897 HHNRFRDVELMIAEMEGAG-FKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDE 955
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI +Y ++ E + + + SY +++ + A++ F+E
Sbjct: 956 DTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEE 1015
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
S + + ++M+ Y G AE L + G +P T I Y
Sbjct: 1016 MRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSY 1070
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 138/349 (39%), Gaps = 49/349 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L++ +++ + G +N+L+ YA++G EK A+ M + +P + N
Sbjct: 763 QQAEILVKGLRQAS-GIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGM 821
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
MRAL DGR L +YV ++EL++ N
Sbjct: 822 MRALIV----------------DGR----------LDELYV----------VVEELQDMN 845
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
S L+ + + G++ EV +I+ ++ A PN Y +MI +L +
Sbjct: 846 FKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMH--LYRSMISLLCHHNRFRD 903
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E E E D+ + N ++ Y G + ++ G +P+ T+
Sbjct: 904 VELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIV 963
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y R+ + L + G P ++ ++ + + + + A+ E ++
Sbjct: 964 MYCRSFRPEEGFTLLNEMGKRG------LTPKLQSYKSLLAASAKAELREQADQIFEEMR 1017
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
L ++ +++ Y AG S +L +K + +E + A+ +L
Sbjct: 1018 SKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHIL 1066
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 78/215 (36%), Gaps = 36/215 (16%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ +Y ++ PE+ ++ EM + P +Y + A A A+++ EEM
Sbjct: 958 YNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEM- 1016
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R + + + + IY AG KAE L ++ ++ L+T YG G
Sbjct: 1017 RSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQP 1076
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + +L+ + + + Y + +
Sbjct: 1077 REAENVLNNLKSSSLEVSTLPY-----------------------------------STV 1101
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
AY K G + +R G +P+ + W F
Sbjct: 1102 FDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCF 1136
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL MKE + + + LMT Y G P + ++ +K+SS+ + Y+
Sbjct: 1043 KAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVF 1102
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAAD---WTTFSNLASI 101
A D + + EMKRDG V D WT F AS+
Sbjct: 1103 DAYLKNGDYNHGTTKLLEMKRDG-VEPDHQVWTCFIRAASL 1142
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ LL +M + L + SL+ AK E+ I +EM++ S + Y++
Sbjct: 972 EEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMM 1031
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M+ + S AE ++ MK DG + T L + Y AG +AE L L++ +
Sbjct: 1032 MKIYRNAGNHSKAENLLAVMKEDG-IEPTIATMHILMTSYGTAGQPREAENVLNNLKSSS 1090
Query: 123 AHRDLSAYQFLITLYGQTGN 142
Y + Y + G+
Sbjct: 1091 LEVSTLPYSTVFDAYLKNGD 1110
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
AE+ F + AT ++V N M+G YA+ GR ++A +L + RG DP+ ++ +
Sbjct: 207 AEEVFLRFAGEGAT--VQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLIN 264
Query: 241 YYLRNGDMKLAV 252
++G + V
Sbjct: 265 ARSKSGCLAAGV 276
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK E + + + + FN L+ Y K G EKI ++I+ MK P TYN+
Sbjct: 287 EKMEKWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNII 346
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ DI + + MK G + + T+ +L S Y +AGL K L+++EN +
Sbjct: 347 IETFGRAGDIENMDEYFKTMKHLG-MKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSD 405
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
D + + +I YGQ G++ ++ ++ +R N+++ MIQ
Sbjct: 406 VVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDNVTFATMIQ 453
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 10/268 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRAL 66
+L +M L + S++ FN+++ Y K ++ + M + + +PD +T+N + A
Sbjct: 221 ILSEMSYLGVECSTVTFNTIINGYGKAKMFREMENSLTNMIEIGNSVPDLFTFNSVIGAY 280
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
I E+ E + G ++ D TF+ L Y +AG++EK ++ ++ R
Sbjct: 281 GNSGRIEKMEKWYNEFQLMG-ISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPT 339
Query: 127 LSAYQFLITLYGQTG---NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y +I +G+ G N+ E ++ + L + PN I+Y +++ L
Sbjct: 340 VVTYNIIIETFGRAGDIENMDEYFKTMKHLGMK-PNA--ITYCSLVSAYSKAGLLMKVNS 396
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
++ E+ D N +I AY + G ++ EL R R P+ T+ Y
Sbjct: 397 ILRQVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDNVTFATMIQAY- 455
Query: 244 RNGDMKLAVDCLEKAIDTGRGD-GGKWV 270
R M A LEK + +G+ GG W+
Sbjct: 456 RGQGMTEAAQALEKMMLAAKGNSGGTWM 483
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 121/309 (39%), Gaps = 25/309 (8%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ L+ + K PE+ + + M+ + P Y + A ++ A ++EMK
Sbjct: 131 YTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAFSTVDEMK 190
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
D T+S L +I + F+ R L E+ + +I YG+
Sbjct: 191 SVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGYGKA--- 247
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA----------EKCFKEWESGCA 193
+++R + + N I N + L + GA EK + E++
Sbjct: 248 ----KMFREMENSLTNMIEIG--NSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQLMGI 301
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
+ DI+ N++I +Y K G E + E ++R P T+ I + + R GD ++
Sbjct: 302 SPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGD----IE 357
Query: 254 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 313
+++ T + G K P++ T + + + + + L ++ + L F
Sbjct: 358 NMDEYFKTMKHLGMK--PNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNC 415
Query: 314 LIRTYAAAG 322
+I Y AG
Sbjct: 416 IINAYGQAG 424
>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 114/287 (39%), Gaps = 38/287 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A ++M+ +G + +N+L+ + G + +++ MK + P+ TY +
Sbjct: 218 EAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTF 277
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE--- 119
+ N + A + EEM R G V D T S L AG F +A +E+E
Sbjct: 278 IAECCRTNAVDDAFSLYEEMVRMG-VLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIG 336
Query: 120 --------------------------------NRNAHRDLSAYQFLITLYGQTGNLSEVY 147
+R DL Y L+ G+ G + EV
Sbjct: 337 AAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVK 396
Query: 148 RIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
++ L+ +T N ++Y +I L ++ GAE+ E E ++ + +I
Sbjct: 397 DMFHC-ALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIING 455
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
K+G L A + + + RG DPN T+ D + + + + A+D
Sbjct: 456 LTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALD 502
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 94/231 (40%), Gaps = 36/231 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SLM K G +++ + + + P+ TY V + AL ++ GAE+++ EM+
Sbjct: 379 YTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEME 438
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY------------- 130
D V + TFS++ + + GL KA +++++ R ++ Y
Sbjct: 439 -DKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQ 497
Query: 131 ------------------QFLITLY----GQTGNLSEVYRIWRSLRLAFPNTANISYLNM 168
+F++ L + G + E ++R + +++Y +
Sbjct: 498 ESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTL 557
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
I L + ++P A K +E + D V NV + G+ + AE +
Sbjct: 558 IDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESI 608
>gi|356567150|ref|XP_003551784.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Glycine max]
Length = 875
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 10/257 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI-PAIIQEMKASSIMPDSYTYNVWMRAL 66
LL +M+ +G +N+ + K G + AI EM A +I+P+ TY+ M
Sbjct: 317 LLAEMEWKGIGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAKNILPNVVTYSTLMAGY 376
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A + +EMK + D +++ L +Y G FE+A KE+E D
Sbjct: 377 SKAERFEDALNIYDEMKHL-LIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKND 435
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y LI YG+ EV +++ + R +PN +++Y +I++ + A
Sbjct: 436 VVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPN--DLTYSTLIKIYTKGRMYAEAMDV 493
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
++E + D+ + +I A K G +E++ L + +G+ PN T+ D + R
Sbjct: 494 YRELKQEGMKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNVVTYNSIIDAF-R 552
Query: 245 NGDMKLAVDCLEKAIDT 261
G A++C A+DT
Sbjct: 553 IGQQLPALEC---AVDT 566
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 3/243 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVW 62
+A +LL M L + + +N+++ AK P E + ++EM A+ +PD TYN
Sbjct: 242 EAVSLLRSMGNFGLEPNLVTYNAIIDAGAKGELPFEIVVKFLEEMIAAGCLPDRLTYNSL 301
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK-ELENR 121
++ A ++ EM+ G + D T++ + G + A A+ E+ +
Sbjct: 302 LKTCVAKGRWQLCRDLLAEMEWKG-IGRDVYTYNTYVDALCKGGRMDLARHAIDVEMPAK 360
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N ++ Y L+ Y + + I+ ++ +SY ++ + NL A
Sbjct: 361 NILPNVVTYSTLMAGYSKAERFEDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEA 420
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
FKE E D+ N +I Y + + +L + + R PN T+
Sbjct: 421 VGKFKEMECCGIKNDVVTYNALIEGYGRHNKYVEVRKLFDEMKARRIYPNDLTYSTLIKI 480
Query: 242 YLR 244
Y +
Sbjct: 481 YTK 483
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 5/182 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + ++MK L + + +N+L+ LYA G E+ +EM+ I D TYN
Sbjct: 383 EDALNIYDEMKHLLIRLDRVSYNTLVGLYANLGWFEEAVGKFKEMECCGIKNDVVTYNAL 442
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ N ++ +EMK R+ + T+S L IY + ++ +A +EL+
Sbjct: 443 IEGYGRHNKYVEVRKLFDEMKAR-RIYPNDLTYSTLIKIYTKGRMYAEAMDVYRELKQEG 501
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI + G + R+ + + + PN ++Y ++I + LP
Sbjct: 502 MKTDVVFYSALIDALCKNGLIESSLRLLDVMTEKGSRPNV--VTYNSIIDAFRIGQQLPA 559
Query: 181 AE 182
E
Sbjct: 560 LE 561
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 133/332 (40%), Gaps = 43/332 (12%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L++ MK N+ S F L+ Y + G + M+ +PD +++ + L+
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLS 232
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
S A+ + +K R D ++NL + AG +AE+ K+++ ++
Sbjct: 233 RKRRASEAQSFFDSLK--DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNV 290
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I + G +S + ++ +
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADM---------------------------------- 316
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+SGCA I N+M + K GR E ++ + ++ G +P+ T+ + + R+ +
Sbjct: 317 LDSGCAPNAITFNNLM-RVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDEN 375
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
++ AV L I K ++ T T R+ E+++DV+GA + +A +
Sbjct: 376 LENAVKVLNTMI------KKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPN 429
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 339
+ L+R +A + T V+ + M+ EV
Sbjct: 430 TVTYNILMRMFAGSKSTDMVLKMKKDMDDKEV 461
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 103/225 (45%), Gaps = 5/225 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ + + G + + ++MK + I P+ YTY++ + AL IS A V +M
Sbjct: 258 YTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML 317
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A + TF+NL ++V+AG EK + +++ D Y FLI + + NL
Sbjct: 318 DSG-CAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENL 376
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMI-QVLVNLKDLPGAEKCF-KEWESGCATYDIRVTN 201
++ ++ + N S N I + + +D+ GA + + K E+ C + N
Sbjct: 377 ENAVKVLNTM-IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV-TYN 434
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+++ +A + ++K+ + +PN T+ + + G
Sbjct: 435 ILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMG 479
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A + M + +++ FN+LM ++ K G PEK+ + +MK PD+ TYN +
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++ A +V+ M + + + +TF+ + + A R ++
Sbjct: 368 ETHCRDENLENAVKVLNTMIK-KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC 426
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y L+ ++ + + V ++ + + + PN +Y ++ + + A
Sbjct: 427 EPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVN--TYRLLVTMFCGMGHWNNA 484
Query: 182 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
K FKE E C T + + +++ + G+L+ EEL E+ ++G
Sbjct: 485 YKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 45/226 (19%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
+ YN + V A +I+ MK V TF+ L YV AGL +A
Sbjct: 152 HPYNEMIDLAGKVRQFDLAWHLIDLMKSRN-VEISIETFTILIRRYVRAGLASEAVHCFN 210
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVNL 175
+E+ D A+ +I+ + SE + SL+ F P+ I Y N+++
Sbjct: 211 RMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDV--IVYTNLVR----- 263
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ + G + AE++ + + G +PN T+
Sbjct: 264 ------------------------------GWCRAGEISEAEKVFKDMKLAGIEPNVYTY 293
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
I D R G + A D +D+G P++ T MR
Sbjct: 294 SIVIDALCRCGQISRAHDVFADMLDSG------CAPNAITFNNLMR 333
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/260 (16%), Positives = 102/260 (39%), Gaps = 2/260 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE + + MK + + ++ ++ + G + + +M S P++ T+N M
Sbjct: 273 EAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R +V +MK+ G D T++ L + E A + L + +
Sbjct: 333 RVHVKAGRPEKVLQVYNQMKKLG-CEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKC 391
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ S + + + +++ +R++ + A ++Y ++++ K K
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLK 451
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERARRRGADPNAKTWEIFSDYY 242
K+ + ++ +++ + G NA +L KE + P+ +E+
Sbjct: 452 MKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQL 511
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
R G +K + +EK I G
Sbjct: 512 RRAGQLKKHEELVEKMIQKG 531
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 142/355 (40%), Gaps = 42/355 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL KM+E + +++ +N+L+ Y K G + +I M + I D TYNV+
Sbjct: 192 KNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVF 251
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + + +++ M+R+ V + T++ L S +V G E A + E+ N
Sbjct: 252 IDNLCRDSRSAKGYLLLKRMRRN-MVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFN 310
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYR---------------------------------- 148
+ Y LI + TGN+ E R
Sbjct: 311 LLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVS 370
Query: 149 -IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
I +R+ ++ISY MI L L A + + D+ +V+I +
Sbjct: 371 SILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGF 430
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
+ G++ NA+E+ + + G PN + Y + G +K A++ A+ G
Sbjct: 431 FRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALN--AYAVMNHSGHVA 488
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ + TF R+ + E+ AE F+ + + D F+ +I Y +G
Sbjct: 489 DHFTCNVLVATFCRYGKLEE----AEYFMNHMSRMGLDPNSVTFDCIINGYGNSG 539
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 130/326 (39%), Gaps = 13/326 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + ++M NL +S+ +N+L+ + TG+ + ++ M + + P+ TY
Sbjct: 297 EVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGAL 356
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + ++E M R G V +++ + + G+ E+A + L ++ +
Sbjct: 357 LNGLYKNAEFGMVSSILERM-RMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVS 415
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ D+ + LI + + G ++ I + I Y +I + L A
Sbjct: 416 VNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEAL 475
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ D NV++ + + G+LE AE R G DPN+ T++ + Y
Sbjct: 476 NAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGY 535
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF---LEIL 299
+GD A +K G PS T ++ ++ A F L +
Sbjct: 536 GNSGDALKAFSVFDKMNSFGH------FPSLFTYGGLLKGLCIGGHINEALKFFHRLRCI 589
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTS 325
AVD++ +F + + +G S
Sbjct: 590 PNAVDNV---IFNTKLTSTCRSGNLS 612
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 111/253 (43%), Gaps = 3/253 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T K +L MK NL F+ +N L+ YAK + + ++M +PD ++++
Sbjct: 717 TSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHS 776
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A +++ + +G V D TF+ L + + E +KA +K++
Sbjct: 777 LILGYCQSKSFDVAIKILRWITLEGHV-IDRFTFNMLITKFCERNEMKKAFELVKQMNQF 835
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ Y L +T + + +R+ + L + N Y+ +I + + ++ GA
Sbjct: 836 MVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGA 895
Query: 182 EKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
K E ++ G +++++ ++ ++ G A ++ENA + + P T+
Sbjct: 896 MKLQDEMKTLGISSHNVAMSAIVRGL-ANSKKIENAIWVLDLMLEMQIIPTVATFTTLMH 954
Query: 241 YYLRNGDMKLAVD 253
Y + ++ A++
Sbjct: 955 VYCKEANVAKALE 967
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 5/218 (2%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ + M A I PD T+N+ + AL A ++ +M+ G V T++ L +
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESG-VYPTAVTYNTLLNW 219
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPN 159
Y + G ++ A + + + ++ D+ Y I + ++ Y + + +R + +PN
Sbjct: 220 YCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPN 279
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
I+Y +I V + A K F E + N +I + G + A L
Sbjct: 280 --EITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRL 337
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
+ G PN T+ + +N + + LE+
Sbjct: 338 MDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILER 375
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/310 (18%), Positives = 121/310 (39%), Gaps = 53/310 (17%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+ +T ++G+ A+I EM + +PD++TY + L I A + +
Sbjct: 598 FNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAI 657
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G ++ + +++L ++ G A +E+ N++ D A+ +I Y + G
Sbjct: 658 EKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKT 717
Query: 144 SEVYRIWRSLR---LAFPNTANISYLNMIQVLVNLKDLPGAEKCFK-------------- 186
S+V I +++ L F N++ N++ L +CF
Sbjct: 718 SKVNDILSTMKSKNLCF----NLATYNIL--LHGYAKRHAMARCFMLYKDMIRHGFLPDK 771
Query: 187 -EWES------GCATYDIRVT-----------------NVMIGAYAKEGRLENAEELKER 222
W S ++D+ + N++I + + ++ A EL ++
Sbjct: 772 FSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQ 831
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
+ PN T+ + +R D A L+ +++G VP+++ T +
Sbjct: 832 MNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGS------VPTNKQYITLING 885
Query: 283 FEQEKDVDGA 292
+ ++ GA
Sbjct: 886 MCRVGNIKGA 895
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/321 (18%), Positives = 134/321 (41%), Gaps = 13/321 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + E+M ++ ++ FN ++ Y++ G K+ I+ MK+ ++ + TYN+ +
Sbjct: 685 ALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLH 744
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + ++ + ++M R G + D ++ +L Y ++ F+ A + L+ +
Sbjct: 745 GYAKRHAMARCFMLYKDMIRHGFL-PDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHV 803
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + LIT + + + + + + + + + PN +Y + L+ D A
Sbjct: 804 IDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVD--TYNALFNGLIRTSDFHKAH 861
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ + ESG + + +I + G ++ A +L++ + G +
Sbjct: 862 RVLQVLLESGSVPTNKQYI-TLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRG 920
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ ++ A+ L+ ++ + +P+ T T M + +E +V A I++
Sbjct: 921 LANSKKIENAIWVLDLMLEM------QIIPTVATFTTLMHVYCKEANVAKALELRSIMEH 974
Query: 302 AVDDLGVEVFEPLIRTYAAAG 322
L V + LI A G
Sbjct: 975 CHVKLDVVAYNVLISGLCANG 995
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 55/293 (18%), Positives = 111/293 (37%), Gaps = 12/293 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE + M + L +S+ F+ ++ Y +G K ++ +M + P +TY
Sbjct: 507 EEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGL 566
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L I+ A + ++ A D F+ + +G A + E+ +
Sbjct: 567 LKGLCIGGHINEALKFFHRLRCIPN-AVDNVIFNTKLTSTCRSGNLSDAIALINEMVTND 625
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRI-WRSLR--LAFPNTANISYLNMIQVLVNLKDLP 179
D Y LI + G + + +++ L PN A Y +++ L+
Sbjct: 626 FLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPA--VYTSLVDGLLKHGHAR 683
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F+E + D NV+I Y+++G+ ++ + + N T+ I
Sbjct: 684 AALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILL 743
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
Y + M + I G ++P + + + + Q K D A
Sbjct: 744 HGYAKRHAMARCFMLYKDMIRHG------FLPDKFSWHSLILGYCQSKSFDVA 790
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A +L+ M E+ + + F +LM +Y K + K + M+ + D YNV
Sbjct: 928 ENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVL 987
Query: 63 MRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A DI A ++ EEMK RD + + + + L + ++E+ L+++++R
Sbjct: 988 ISGLCANGDIEAAFKLYEEMKQRD--LWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045
Query: 122 NAHR 125
R
Sbjct: 1046 ELMR 1049
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 2/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+++ +K G I +EM + PD T+N + A N +R+ EM+
Sbjct: 192 YNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEME 251
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-ENRNAHRDLSAYQFLITLYGQTGN 142
G +A D T++ L + Y G ++ + ++ + Y +I Y + G
Sbjct: 252 ERG-IARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGL 310
Query: 143 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
E +++ +R I Y M+ + L + A + E DI N
Sbjct: 311 AHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNA 370
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
++ +Y K+G+ A L E ++RGA PN T+ D Y ++G
Sbjct: 371 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHG 414
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 6/249 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNV 61
E+ + + +M+E + + +N+L+ Y + G A+++ M K+S I P TY+
Sbjct: 241 EECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYST 300
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + A + +EM R+ V D ++ + I+ G F++A + +E
Sbjct: 301 MIDGYAKLGLAHEAIALFQEM-RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEA 359
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+D+ Y L+ YG+ G E + + R A PN ++Y +I
Sbjct: 360 GFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNI--LTYSALIDAYCKHGFHR 417
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F++ + D+ + + ++ K G + A L E G PN T+
Sbjct: 418 DAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 477
Query: 240 DYYLRNGDM 248
D Y R M
Sbjct: 478 DAYGRQCLM 486
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 86/226 (38%), Gaps = 6/226 (2%)
Query: 33 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 92
K+ P +PA++ ++ A + PD + V R L + + M + + W
Sbjct: 62 KSPSPSLMPALLDQVSAHLLGPDDLPFIV--RELGHSGQWEKVVKSFDWMVLQQNLRSQW 119
Query: 93 TTF-SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
S + S G + A+ ++ Y LI YG++G L++ I+
Sbjct: 120 DKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFE 179
Query: 152 SLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
++++ PN + Y +I D P A + F+E + D N +I A +
Sbjct: 180 AMKVVCKPNL--VVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRA 237
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
R E + + RG + T+ Y R G M L +E
Sbjct: 238 NRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALME 283
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +A AL ++M+ N+ + +N+++ ++A+ G+ ++ +I + M+ + D TYN
Sbjct: 310 LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYN 369
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A ++EEMK+ G + + T+S L Y + G A ++++
Sbjct: 370 ALLDSYGKQGKFREAMSLLEEMKQRG-ASPNILTYSALIDAYCKHGFHRDAMALFQDVKK 428
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE 145
D+ Y L+ + G+ E
Sbjct: 429 AGLQPDVVLYSTLVDGCCKNGSPDE 453
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 12/298 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA LE+M+ + + + + +N L+ Y E +I EM PD +Y
Sbjct: 284 DKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTV 343
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L I ++E+M +D + D T++ + + G ++A L+E E R
Sbjct: 344 MGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERR 403
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y ++ + + G + + I + + P+ ++Y ++I L + +
Sbjct: 404 FRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV--VTYTSVINGLCQERKVDQ 461
Query: 181 AEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A+K ++ ++ GC + T ++ G K G A E+ + PNA T+ +
Sbjct: 462 AKKMLRQMYKHGCKPNTVSYTALLNG-LCKNGNSLEAREMMNMSEEDWWIPNAITYSVLM 520
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ R G A D + + I G + P+ I ++ QE+ VD A+ F+E
Sbjct: 521 HGFRREGKSSEACDLVREMIKKG------FFPTPVEINLLIQSLCQEEKVDEAKRFME 572
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 17/233 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A+ +E+ + + F +++ + + E +++ +M S+ PD TY
Sbjct: 564 VDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTT 623
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL I A ++ +M R G + T+ + Y G E + L+++ +R
Sbjct: 624 IIDALGKKGRIEEATKLAMKMLRVGLIPTP-VTYRTVIHQYCRMGRVEDLLKLLEKMLSR 682
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
R +AY +I GNL + Y++ + LR A AN ++ +I+ ++ K +P
Sbjct: 683 QECR--TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHM-LIESYLS-KGIP- 737
Query: 181 AEKCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+ C + D+++ + EG+ E A++L R RG
Sbjct: 738 ----LMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 786
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 2/224 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+++ +K G I +EM + PD T+N + A N +R+ EM+
Sbjct: 193 YNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEME 252
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-ENRNAHRDLSAYQFLITLYGQTGN 142
G +A D T++ L + Y G ++ + ++ + Y +I Y + G
Sbjct: 253 ERG-IARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGL 311
Query: 143 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
E +++ +R I Y M+ + L + A + E DI N
Sbjct: 312 AHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNA 371
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
++ +Y K+G+ A L E ++RGA PN T+ D Y ++G
Sbjct: 372 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHG 415
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 6/249 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNV 61
E+ + + +M+E + + +N+L+ Y + G A+++ M K+S I P TY+
Sbjct: 242 EECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYST 301
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + A + +EM R+ V D ++ + I+ G F++A + +E
Sbjct: 302 MIDGYAKLGLAHEAIALFQEM-RNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEA 360
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+D+ Y L+ YG+ G E + + R A PN ++Y +I
Sbjct: 361 GFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNI--LTYSALIDAYCKHGFHR 418
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F++ + D+ + + ++ K G + A L E G PN T+
Sbjct: 419 DAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 478
Query: 240 DYYLRNGDM 248
D Y R M
Sbjct: 479 DAYGRQCLM 487
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 86/226 (38%), Gaps = 6/226 (2%)
Query: 33 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 92
K+ P +PA++ ++ A + PD + V R L + + M + + W
Sbjct: 63 KSPSPSLMPALLDQVSAHLLGPDDLPFIV--RELGHSGQWEKVVKSFDWMVLQQNLRSQW 120
Query: 93 TTF-SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
S + S G + A+ ++ Y LI YG++G L++ I+
Sbjct: 121 DKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFE 180
Query: 152 SLRLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
++++ PN + Y +I D P A + F+E + D N +I A +
Sbjct: 181 AMKVVCKPNL--VVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRA 238
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
R E + + RG + T+ Y R G M L +E
Sbjct: 239 NRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALME 284
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +A AL ++M+ N+ + +N+++ ++A+ G+ ++ +I + M+ + D TYN
Sbjct: 311 LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYN 370
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A ++EEMK+ G + + T+S L Y + G A ++++
Sbjct: 371 ALLDSYGKQGKFREAMSLLEEMKQRG-ASPNILTYSALIDAYCKHGFHRDAMALFQDVKK 429
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE 145
D+ Y L+ + G+ E
Sbjct: 430 AGLQPDVVLYSTLVDGCCKNGSPDE 454
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 28/326 (8%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
LL++MK+ + S + +N+++ A+ G E++ + +M+ I D TYN + A
Sbjct: 203 LLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSAC 262
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A AE V M +G + D TT+S L + + EK LKE+E+ + D
Sbjct: 263 ARRGLGDEAEMVFRTMN-EGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPD 321
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG---- 180
+++Y L+ + Q+G++ E ++R ++ A PN A S +L+NL G
Sbjct: 322 ITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYS------ILLNLYGRHGRYDD 375
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE--IF 238
F E + + N++I + + G + L +PN +T+E IF
Sbjct: 376 VRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIF 435
Query: 239 S--DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ L K+ + EK + VPSS+ + + Q + A
Sbjct: 436 ACGKGGLHEDAKKILLHMNEKGV----------VPSSKAYTGVIEAYGQAALYEEALVAF 485
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAG 322
+ + VE + LI+ +A G
Sbjct: 486 NTMNEVGSKPTVETYNSLIQMFAKGG 511
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 158/359 (44%), Gaps = 30/359 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ L +M+ + + +N+L++ A+ G ++ + + M I+PD TY+
Sbjct: 234 EELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYL 293
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +N + +++EM+ G D T+++ L + ++G ++A ++++
Sbjct: 294 VETFGKLNRLEKVSELLKEMESGGSF-PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAG 352
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNTANISYLNMIQVLVNLKDLPG 180
+ + Y L+ LYG+ G +V ++ ++++ PN A + +L+N+ G
Sbjct: 353 CVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYN------ILINVF---G 403
Query: 181 AEKCFKEWESGCATYDIRVTNV---------MIGAYAKEGRLENAEELKERARRRGADPN 231
FKE + +D+ NV +I A K G E+A+++ +G P+
Sbjct: 404 EGGYFKEVVT--LFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPS 461
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
+K + + Y G L + L A +T G K P+ ET + ++ F +
Sbjct: 462 SKAYTGVIEAY---GQAALYEEAL-VAFNTMNEVGSK--PTVETYNSLIQMFAKGGLYKE 515
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
+E L + ++ + F +I + G+ + ++MEK + ++ LEA+
Sbjct: 516 SEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARC-DPDEQTLEAV 573
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 1/145 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A+ +L M E + SS + ++ Y + E+ M P TYN
Sbjct: 442 LHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYN 501
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ A +E ++ +M + G VA + TF+ + + + G FE+A +A E+E
Sbjct: 502 SLIQMFAKGGLYKESEAILLKMGQSG-VARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEK 560
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE 145
D + ++++Y G + E
Sbjct: 561 ARCDPDEQTLEAVLSVYCFAGLVEE 585
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 14/289 (4%)
Query: 9 LEKMKELNLGFS------SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
LEKM ++ + S + FN L+ G + + + EM+ + P+ T+
Sbjct: 69 LEKMTQVFVDISNYGSPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTL 128
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L+ + + A R+ E+M + + + + ++ L + G A + +E+ N
Sbjct: 129 IYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSN 188
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI+ + G EV I R + ++Y +I DL A
Sbjct: 189 VKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAH 248
Query: 183 KCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E E GC D+ N +IG KEG+L+ A +L E RRG P+ ++ I D
Sbjct: 249 RVMDEMVEKGCKP-DVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDG 307
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
+K A L++ I G +VP +E+I + QE +++
Sbjct: 308 LCEMMQLKEATSILDEMIFKG------YVPRNESINKLVDRLCQECNME 350
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L E+M N+ S +++L++ K G E++ I++EM + PD+ TYN +
Sbjct: 177 AFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIIN 236
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
ND+ A RV++EM G D +F+ + + G +KA L+++ R
Sbjct: 237 GHCKENDLESAHRVMDEMVEKG-CKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCP 295
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRI 149
D+ +Y+ + + L E I
Sbjct: 296 PDVLSYRIIFDGLCEMMQLKEATSI 320
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + I A + +EM G V + TF+ L + + G + A K++ +++
Sbjct: 221 GLCKESKIDDANELFDEMLVKGLVP-NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEH 339
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D V +I +EG+ +AE++ G P+A+T+ + + + +
Sbjct: 340 RKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 399
Query: 245 NGDM 248
GD+
Sbjct: 400 KGDV 403
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 89/236 (37%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L +S+ F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 229 DDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 288
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM G + D T++ L + G + A K + N
Sbjct: 289 IYGLCKKGDLKQAHHLIDEMSMKG-LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQEN 347
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + G + AE
Sbjct: 348 TRLDDVVYTALISGLCREGQSVD-----------------------------------AE 372
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E S D R ++I + K+G + +L + +R G P+ T+ +
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 80/197 (40%), Gaps = 1/197 (0%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + + G + +++ L + Y+ G ++ R
Sbjct: 143 YFFNILMHRFCKDGDIRIAQSVFDAITKWG-LRPSVVSYNTLMNGYIRLGDLDEGFRLKS 201
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ D+ Y LI + + + ++ + + ++++ +I
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNG 261
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ A + +K+ S + D+ N +I K+G L+ A L + +G P+ T+
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYT 321
Query: 237 IFSDYYLRNGDMKLAVD 253
D ++GD+ A +
Sbjct: 322 TLIDGCCKDGDLDTAFE 338
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 117/259 (45%), Gaps = 8/259 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+ A LL++M++ + +N ++ + ++ +++EM PD TYN
Sbjct: 96 TKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 155
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+++ L + + A + + M V D +++ + + ++G + A R L ++ NR
Sbjct: 156 FIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNR 211
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAF-PNTANISYLNMIQVLVNLKDLP 179
D+ Y LI + + G + + S L+L PN ++Y +++ L L +
Sbjct: 212 GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM--VAYNSLLGALHRLGHIG 269
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE E E T D+ N I K R++ A+ + +R RG PNA ++ +
Sbjct: 270 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLV 329
Query: 240 DYYLRNGDMKLAVDCLEKA 258
+ + ++ A+ +E+A
Sbjct: 330 EELCKKKELDDAITLVEQA 348
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 102/244 (41%), Gaps = 8/244 (3%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
+ F L+ ++ EK ++ MK +PD YN + + D A + +
Sbjct: 10 AFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLA 69
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
EM ++ T++N+ +AG + A + L E+ ++ ++ Y ++ +
Sbjct: 70 EMVKN-HCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEE 128
Query: 141 GNLSEVYRIWR--SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
L E ++ ++R FP+ ++Y + I+ L + A K T D+
Sbjct: 129 RKLDEAKKMLEEMAVRGYFPDV--VTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVV 183
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
+I K G L++A + ++ RG P+ T+ D + + G+++ A+ L+
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243
Query: 259 IDTG 262
+ G
Sbjct: 244 LKLG 247
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 107/265 (40%), Gaps = 9/265 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A LL+ M +L + + +NSL+ + GH K ++ EM+ PD +YN
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + A+ V + M G + +++S L + + A +++ +
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERG-CTPNASSYSMLVEELCKKKELDDAITLVEQAREK 351
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANISYLNMIQVLVNLKDL 178
D+ Y L+ + G E ++ + ++ P+ Y M+ + +
Sbjct: 352 YQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDV--FFYNVMLDSHCKRRQI 409
Query: 179 PGAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A + K+ E C ++ N+++ + RL +AE + G P+ T+
Sbjct: 410 DKALQIHKQMLERNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 467
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTG 262
D + G A++ E+A+ G
Sbjct: 468 LVDAMCKCGKSAAALELFEEAVKGG 492
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 94/237 (39%), Gaps = 3/237 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A +L++M + ++SL+ + K G E+ ++ M P+ YN
Sbjct: 199 DSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 258
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + I AE ++ EM+R G D +++ +A +KA+ + R
Sbjct: 259 LGALHRLGHIGKAEDMLVEMERRG-FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 317
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ S+Y L+ + L + + R + + Y ++ L A
Sbjct: 318 CTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEAC 377
Query: 183 KCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
F K + D+ NVM+ ++ K +++ A ++ ++ R N TW I
Sbjct: 378 ALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNIL 433
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 131/325 (40%), Gaps = 9/325 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTY 59
M KA A+ ++K ++ +NS++ + G EK+ + EM PD+ TY
Sbjct: 174 MVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTY 233
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + A + A +++ EMK +G + ++ L +++ + A +E+
Sbjct: 234 SALISAFCKLGRRDSAIQLLNEMKDNG-MQPTTKIYTMLVALFFKLNDVHGALSLFEEMR 292
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
++ D+ Y LI G+ G + E Y + ++ I NMI L L
Sbjct: 293 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLD 352
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGA-YAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A K F+E + + N +I A + + R ER + G P++ T+ I
Sbjct: 353 DAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSIL 412
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
D + + M+ A+ LE+ + G + P + + + K D A +
Sbjct: 413 IDGFCKTNRMEKAMMLLEEMDEKG------FPPCPAAYCSLIDALGKAKRYDLACELFQE 466
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGR 323
LK+ V+ +I+ AGR
Sbjct: 467 LKENCGSSSSRVYAVMIKHLGKAGR 491
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 123/324 (37%), Gaps = 45/324 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL +MK+ + ++ + L+ L+ K ++ +EM+ PD +TY
Sbjct: 247 DSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTEL 306
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R L I A EM+R+G D +N+ + +AG + A + +E+
Sbjct: 307 IRGLGKAGRIDEAYHFFYEMQREG-CRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLR 365
Query: 123 AHRDLSAYQFLI-TLYGQTGNLSEV-----------------------------YRIWRS 152
+ Y +I L+ SEV R+ ++
Sbjct: 366 CIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKA 425
Query: 153 LRL-------AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+ L FP +Y ++I L K A + F+E + C + RV VMI
Sbjct: 426 MMLLEEMDEKGFP-PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIK 484
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
K GRL++A + + + G P+ + R G + A+ + + + G
Sbjct: 485 HLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG--- 541
Query: 266 GGKWVPSSETIRTFMRHFEQEKDV 289
+P + + ++++D+
Sbjct: 542 ---CIPDINSYNIILNGLQKQEDL 562
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 4/237 (1%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL-AAVNDISGAERVI 79
++ N+++ K G + + QEM +P TYN ++AL + + S
Sbjct: 335 TIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWF 394
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
E MK G ++ T+S L + + EKA L+E++ + +AY LI G+
Sbjct: 395 ERMKESG-ISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIR 198
+++ L+ ++++ Y MI+ L L A F E GCA D+
Sbjct: 454 AKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAP-DVY 512
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
N ++ A+ G L+ A R + G P+ ++ I + + D+ + C
Sbjct: 513 AYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDLIVQWRCF 569
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + ++K+ L + NSL+ + G E++ + + MK + I P YTYN +
Sbjct: 168 KIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLV 227
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L I AE+V E M G++ D T++ + Y +AG +KA +++E +N
Sbjct: 228 NGLVNSMFIESAEKVFEVMD-GGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNV 286
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y LI + ++ + SY +I L + A
Sbjct: 287 KPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYA 346
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+ ++ + +I +Y+K G +E A L ER + G +P+A T+ + +
Sbjct: 347 VFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLC 406
Query: 244 RNG 246
++G
Sbjct: 407 KSG 409
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 114/296 (38%), Gaps = 38/296 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE + E M + ++ +N ++ Y K G +K ++M+ ++ PD TY
Sbjct: 237 ESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTL 296
Query: 63 MRALAAVND--------------------------ISG---------AERVIEEMKRDGR 87
++A + D I G A V E M + G
Sbjct: 297 IQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKG- 355
Query: 88 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
A+ ++ L Y + G E+A R + ++N D Y L+ ++G L +
Sbjct: 356 CRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGM 415
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGA 206
++ R + Y ++I L + AE F+E E GCA D N +I A
Sbjct: 416 ELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCAR-DSYCYNAIIDA 474
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
AK G+++ A L R G D T+ I D + + A+ +K ID G
Sbjct: 475 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG 530
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L ++M + + ++ + SL+ + K +K ++ M + P+ T+N+ +
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
N I + +M G V AD T++ L + E G E A+ +E+ +R
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRG-VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ +Y+ L+ G + I+ + + +I N+I + + A K
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS-KMELDIGIYNII-----IHGMCNASK 507
Query: 184 CFKEWESGCA------TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
W+ C+ D++ N+MIG K+G L A+ L + G PN T+ I
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 238 FSDYYLRNGD 247
+L GD
Sbjct: 568 LIRAHLGEGD 577
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L+++M E + + + ++ + K+G ++++M+ I D+ Y++ +
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + A + EM+ G AD ++ L + AG ++ + L+++ R
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ A+ LI + + G L E + + + R P+T ++Y ++I L A
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT--VTYTSLIDGFCKENQLDKAN 372
Query: 183 KCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
S GC +IR N++I Y K +++ EL + RG + T+
Sbjct: 373 HMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 242 YLRNGDMKLA 251
+ G +++A
Sbjct: 432 FCELGKLEVA 441
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 127/328 (38%), Gaps = 24/328 (7%)
Query: 11 KMKELNLGFSSM-------------PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 57
+ ++L+L FS+M F++L+ G + ++ M P
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
T N + L +S A +I+ M G + T+ + + ++G A L++
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+E R D Y +I + G+L + ++ + + I Y +I+
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
K ++ T D+ + +I + KEG+L AEEL + +RG P+ T+
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV-DGAEGFL 296
D + + + A L+ + G G P+ T + + + + DG E F
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCG------PNIRTFNILINGYCKANLIDDGLELFR 411
Query: 297 EI-LKKAVDDLGVEVFEPLIRTYAAAGR 323
++ L+ V D + LI+ + G+
Sbjct: 412 KMSLRGVVAD--TVTYNTLIQGFCELGK 437
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 7/259 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A LL KM+E + ++ ++ ++ K G + + EM+ D Y
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 62 WMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+R +++ +M KR ++ D FS L +V+ G +AE KE+
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKR--KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
R D Y LI + + L + + + + PN + L NL D
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID- 404
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
G E F++ D N +I + + G+LE A+EL + R P+ +++I
Sbjct: 405 DGLE-LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 239 SDYYLRNGDMKLAVDCLEK 257
D NG+ + A++ EK
Sbjct: 464 LDGLCDNGEPEKALEIFEK 482
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 98/243 (40%), Gaps = 5/243 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L+++M E+ + + N+L+ G +I M + P+ TY +
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + + A ++ +M+ + ++ D +S + + G + A E+E +
Sbjct: 220 KVMCKSGQTALAMELLRKME-ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y LI + G + ++ R + R P+ S L I V L A
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL--IDCFVKEGKLREA 336
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ KE + D +I + KE +L+ A + + +G PN +T+ I +
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 242 YLR 244
Y +
Sbjct: 397 YCK 399
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/215 (18%), Positives = 90/215 (41%), Gaps = 1/215 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ + G + ++++M I PD ++ + + AE + +EM
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G ++ D T+++L + + +KA L + ++ ++ + LI Y + +
Sbjct: 345 QRG-ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ ++R + L ++Y +IQ L L A++ F+E S DI ++
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ G E A E+ E+ + + + + I
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 5/257 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+++ E+ + +S F + +++ G+ E+ ++ ++MK + P + + +
Sbjct: 738 FFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYS 797
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
AE +++++K+ G + D ++++ S+Y + G + A K ++ D
Sbjct: 798 RETVEIDAEELVKDIKKAG-LELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDA 856
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS-YLNMIQVLVNLKDLPGAEKCFK 186
+ + LI LY + + E + R + + N NIS Y +I L+ AE FK
Sbjct: 857 TTFNTLIMLYSRNQMVQEAQALLREM-IKTGNAPNISTYTTLISAYGRLQAYEDAELVFK 915
Query: 187 EW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
E+GC D NVMI Y K G EE+ E+ + G +P+ T + D Y +
Sbjct: 916 SIAETGCKP-DATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKG 974
Query: 246 GDMKLAVDCLEKAIDTG 262
G A + LE + G
Sbjct: 975 GATGKAEEVLETLPEIG 991
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 103/242 (42%), Gaps = 37/242 (15%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI-PAIIQEMKASSIMPDSYTYNVWMR 64
+ LL +M++ + FN ++ + G E + +++Q++ A+ + PD+ TYN +
Sbjct: 145 QQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLIS 204
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + N +S A + EEM+R G W T++ + S+Y AG E A + ++ +
Sbjct: 205 ACSLNNRLSDAILIFEEMQRQGCDPDIW-TYNAMISVYGRAGRVEAASSIFRIMQEQGFT 263
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y ++ + + G + EV RI +R A ++ I+Y
Sbjct: 264 PDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITY------------------- 304
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
N MI Y K G AEEL + + G P++ T+ + D +
Sbjct: 305 ----------------NTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGK 348
Query: 245 NG 246
G
Sbjct: 349 AG 350
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 1/258 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A ++ +MKE S F +L+ LY++ +++++K + + D YN
Sbjct: 768 EEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHM 827
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A V + M+ G + D TTF+ L +Y + ++A+ L+E+
Sbjct: 828 ISLYSKLGSYRNAALVFKGMQEIG-CSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTG 886
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++S Y LI+ YG+ + +++S+ +Y MI V + E
Sbjct: 887 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIE 946
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ ++ + + ++++ +Y K G AEE+ E G P+A + + +
Sbjct: 947 EIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSH 1006
Query: 243 LRNGDMKLAVDCLEKAID 260
L N D AV L K D
Sbjct: 1007 LNNKDYLSAVIWLRKMTD 1024
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 1/242 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +LL+ + L ++ +N+L++ + I +EM+ PD +TYN +
Sbjct: 180 ASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMIS 239
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A + M+ G D T++++ + G E+ ER + +
Sbjct: 240 VYGRAGRVEAASSIFRIMQEQG-FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCS 298
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y +I +YG+ G + ++ ++ ++++ +I L + A
Sbjct: 299 SDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAM 358
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F++ ++ + MI AYAK +AE R G P+ + + D + +
Sbjct: 359 FEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFK 418
Query: 245 NG 246
G
Sbjct: 419 AG 420
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 5/203 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + + M+E+ + FN+L+ LY++ ++ A+++EM + P+ TY +
Sbjct: 840 AALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLIS 899
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + AE V + + G D T ++ + ++Y +AG K E +++++
Sbjct: 900 AYGRLQAYEDAELVFKSIAETG-CKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFE 958
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
L+ L+ YG+ G + + +L + I Y ++I +N KD A
Sbjct: 959 PSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIW 1018
Query: 185 FKEWESGCATYDIRVTNVMIGAY 207
++ C +R T+V I +
Sbjct: 1019 LRKMTDAC----VRPTHVTITCF 1037
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 52/314 (16%)
Query: 75 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
AE V ++++ G A + + +S L S Y E G FE+A RAL + + + +++
Sbjct: 665 AEIVFRDLQQHG-FAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVL 723
Query: 135 TLYGQTGNLSEVYRIWRSLR---------------LAFPNTANIS-----YLNM------ 168
+G+ G E+ ++ L AF N+ Y M
Sbjct: 724 EAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFS 783
Query: 169 --IQVLVNLKDLPG-------AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
IQV L L AE+ K+ + DI + N MI Y+K G NA +
Sbjct: 784 PSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALV 843
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 279
+ + G P+A T+ Y RN ++ A L + I TG P+ T T
Sbjct: 844 FKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNA------PNISTYTTL 897
Query: 280 MRHFEQEKDVDGAEGFLEILKKAVDDLGVE----VFEPLIRTYAAAGRTSPV--MLRRLK 333
+ + + + + A E++ K++ + G + + +I Y AG + ++ ++K
Sbjct: 898 ISAYGRLQAYEDA----ELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMK 953
Query: 334 MEKVEVSEASKKLL 347
++ E S + +L
Sbjct: 954 VDGFEPSLTTIHML 967
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 121/309 (39%), Gaps = 43/309 (13%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
E ++G +NSLM++YA+ G + ++ M+ PD T+N+ ++A
Sbjct: 118 ESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQE 177
Query: 74 G-AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
G A +++++ G + D T++ L S A +E++ + D+ Y
Sbjct: 178 GLASSLLQDVYAAG-LRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNA 236
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
+I++YG+ G + I+R ++ E+ F
Sbjct: 237 MISVYGRAGRVEAASSIFRIMQ---------------------------EQGF------- 262
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
T D N ++ A+A++GR+E E ++ R + T+ Y + G + A
Sbjct: 263 -TPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAE 321
Query: 253 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 312
+ + + GR P S T + + V+ A E + K+ ++ F
Sbjct: 322 ELYVQMKEEGR------CPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFS 375
Query: 313 PLIRTYAAA 321
+I YA A
Sbjct: 376 AMICAYAKA 384
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KAE L +MKE S+ F L+ K G + A+ ++M S + P ++
Sbjct: 316 MHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFS 375
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + + AE M R G V D +S + ++ +AG+ EK K +
Sbjct: 376 AMICAYAKADMFTDAEHTYSCMLRAG-VRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVG 434
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEV 146
+LS Y ++ ++ Q +++E+
Sbjct: 435 SGLKPELSVYAIMVRVFYQKSSVAEI 460
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ E + M++ + +N+++ +Y K G K + +MK PDS T+ V
Sbjct: 283 EEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVL 342
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L ++ A + E+M + +V FS + Y +A +F AE +
Sbjct: 343 IDTLGKAGFVNEAAAMFEDMLK-SQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAG 401
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
DL AY ++ ++ + G + +++++
Sbjct: 402 VRPDLLAYSVMLDVFFKAGMPEKCIILYKAM 432
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 90/223 (40%), Gaps = 7/223 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A ++ M+E ++ +NS++ +A+ G E++ I M+ + D TYN
Sbjct: 247 VEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNT 306
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AE + +MK +GR D TF+ L +AG +A +++
Sbjct: 307 MIHMYGKAGMHRKAEELYVQMKEEGR-CPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKS 365
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L A+ +I Y + ++ + + A ++Y M+ V +P
Sbjct: 366 QVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFK-AGMP-- 422
Query: 182 EKC---FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
EKC +K ++ V +M+ + ++ + E L +
Sbjct: 423 EKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSK 465
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A+ALL +M + + + +L++ Y + E + + + + PD+ YN
Sbjct: 871 MVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYN 930
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + + E +IE+MK DG TT L Y + G KAE L+ L
Sbjct: 931 VMINVYRKAGEHRKIEEIIEQMKVDG-FEPSLTTIHMLMDSYGKGGATGKAEEVLETLPE 989
Query: 121 RNAHRDLSAYQFLI 134
D Y +I
Sbjct: 990 IGMSPDAIHYTSII 1003
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 103/273 (37%), Gaps = 11/273 (4%)
Query: 50 SSIMPD--SYTYNVWMRALAAVNDISGAERVIEEMKRDGRV-AADWTTFSNLASIYVEAG 106
SSI P ++ Y LA S AE + + G+V +D+ L + Y AG
Sbjct: 533 SSIEPSVAAHLYKRLAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDF--LKVLVASYDRAG 590
Query: 107 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 166
+ ++A ++ D Q + Y + G + + AF + ++
Sbjct: 591 MQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVKDSAMHV 650
Query: 167 NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR 226
+I LK AE F++ + + + ++ AYA+ G E A +
Sbjct: 651 AIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAA 710
Query: 227 GADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 286
G PNA + + R G K + ++ + G P+S T F +
Sbjct: 711 GLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGIS------PNSRTFVVIFHAFSRN 764
Query: 287 KDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
+++ A +K+A ++VF+ L+ Y+
Sbjct: 765 GNLEEARSMYRQMKEAGFSPSIQVFKALLALYS 797
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 44/342 (12%)
Query: 17 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 76
+G S + N++M+ + K G + + M + ++ DS++YN+ + L + A
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEAL 326
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
++M++ G V D T++ LA ++ GL A + ++++ + + DL Y LI
Sbjct: 327 GFTDDMEKHG-VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICG 385
Query: 137 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAEKCFKEWESGCATY 195
+ Q GN+ E ++ R L+ N+ + NM + L + + A F E E+
Sbjct: 386 HCQMGNIEEALKL-RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA----------------------- 232
D V +++I KEG ++ A +L E+ R + P+
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504
Query: 233 KTW------------EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
TW I D Y+R + A+ K I+ G PS T T +
Sbjct: 505 DTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG------ITPSVVTFNTLI 558
Query: 281 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
F + D+ A LE+++ V + L+ Y G
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVG 600
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 126/337 (37%), Gaps = 52/337 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + M + L S +N L+ G ++ +M+ + PD TYN
Sbjct: 286 LIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYN 345
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA--------- 111
+ + +SGA +V+++M G + D T++ L + + G E+A
Sbjct: 346 TLAKGFLLLGLMSGARKVVQKMLLQG-LNPDLVTYTTLICGHCQMGNIEEALKLRQETLS 404
Query: 112 -----------------------ERALK---ELENRNAHRDLSAYQFLITLYGQTGNLSE 145
E AL E+E D Y LI + G +
Sbjct: 405 RGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQR 464
Query: 146 VYRIWRSLRLA--FPNTANISYLNMIQVLVNL---KDLPGAEKCFKEWESGCATYDIRVT 200
Y+++ +RL FP+ + VL+ L ++ A F W D+ +
Sbjct: 465 AYQLYEQMRLKRKFPH-----HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLY 519
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N+MI Y + + A +L + RG P+ T+ + + R GD+ A K ++
Sbjct: 520 NIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEA----RKMLE 575
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
R G VPS T T M + + ++ FL
Sbjct: 576 VIRLKG--LVPSVVTYTTLMNAYCEVGNMQEMFHFLH 610
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 109/259 (42%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +LE ++ L S + + +LM Y + G+ +++ + EM+A++++P TY V +
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ L N + + +++E M G + D T++ + + + KA + + N
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKG-LLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNC 687
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y+ LI G+L +V R+ S+ ++Y+ +I+ + A
Sbjct: 688 DPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALG 747
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F + + IR + +I K G + A+ G P+ + + + +
Sbjct: 748 YFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFH 807
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+ G+ + L + +G
Sbjct: 808 QQGNNSSVFEFLAMVVKSG 826
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/299 (16%), Positives = 114/299 (38%), Gaps = 7/299 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L KM E + S + FN+L+ + + G + +++ ++ ++P TY M
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V ++ + EM+ + V T++ L ++ + L+ + +
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANA-VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGL 652
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y +I + + +++ +++ + L + ++Y +I L DL ++
Sbjct: 653 LPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDR 712
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E T +I A+ +G++ A + +G + + + +
Sbjct: 713 MVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLC 772
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G + A + G P E +T + F Q+ + FL ++ K+
Sbjct: 773 KRGLITEAKYFFVMMLSEG------VTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKS 825
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + ++K+ L + NSL+ + G E++ + + MK + I P YTYN +
Sbjct: 166 KIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLV 225
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L I AE+V E M G++ D T++ + Y +AG +KA +++E +N
Sbjct: 226 NGLVNSMFIESAEKVFEVMD-GGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNV 284
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y LI + ++ + SY +I L + A
Sbjct: 285 KPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYA 344
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+ ++ + +I +Y+K G +E A L ER + G +P+A T+ + +
Sbjct: 345 VFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLC 404
Query: 244 RNG 246
++G
Sbjct: 405 KSG 407
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 114/296 (38%), Gaps = 38/296 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE + E M + ++ +N ++ Y K G +K ++M+ ++ PD TY
Sbjct: 235 ESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTL 294
Query: 63 MRALAAVND--------------------------ISG---------AERVIEEMKRDGR 87
++A + D I G A V E M + G
Sbjct: 295 IQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKG- 353
Query: 88 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
A+ ++ L Y + G E+A R + ++N D Y L+ ++G L +
Sbjct: 354 CRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGM 413
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGA 206
++ R + Y ++I L + AE F+E E GCA D N +I A
Sbjct: 414 ELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCAR-DSYCYNAIIDA 472
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
AK G+++ A L R G D T+ I D + + A+ +K ID G
Sbjct: 473 LAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG 528
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + EKM + +++ F L+ + K G E + + +EM+ + PD+ TYN
Sbjct: 327 EDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAI 386
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A ++ EM+ G + D T++ L Y + + A + +
Sbjct: 387 VNGLCRARDLKSASGIVVEMRSAG-LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 445
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + G ++ R+ + A N +Y +I D+
Sbjct: 446 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGL 505
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ KE ++ + NV++ + K G+++NA+ L G P+ T+ I D +
Sbjct: 506 RLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGH 565
Query: 243 LRNG 246
++G
Sbjct: 566 CKHG 569
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 109/262 (41%), Gaps = 1/262 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + ++M+ + + + FN++++ + G + + + M + + PD YTY ++
Sbjct: 259 AQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQ 318
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L V I A V E+M G + + F+ L + + G E +E+ R
Sbjct: 319 GLCRVGRIEDARGVFEKMCGRG-MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVR 377
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y ++ + +L I +R A ++Y +I ++L A +
Sbjct: 378 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEI 437
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ + D +I +K GR +AE + G +P+ T+ + D + R
Sbjct: 438 KQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCR 497
Query: 245 NGDMKLAVDCLEKAIDTGRGDG 266
GD+K + L++ + GR G
Sbjct: 498 KGDVKTGLRLLKEMQNKGRKPG 519
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 49/292 (16%)
Query: 37 PEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFS 96
PE +Q + A + P++ +NV MR L + +++ A+ V +EM+ G V +F+
Sbjct: 222 PEACAFYLQLLDAG-LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRG-VRRTVVSFN 279
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
+ S AG + AE HR +S + G +VY
Sbjct: 280 TMISGMCRAGDLDGAE---------TLHRRMS----------EAGVTPDVY--------- 311
Query: 157 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
+Y +IQ L + + A F++ + V ++I A+ K+G E
Sbjct: 312 -------TYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETM 364
Query: 217 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 276
EL R RG P+A T+ + R D+K A + + G P + T
Sbjct: 365 LELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG------LRPDTVTY 418
Query: 277 RTFMRHFEQEKDVDGAEGFLEILKKAV-DDLGVE--VFEPLIRTYAAAGRTS 325
T + + +E+++D A +EI + V + +G++ + LI + AGR++
Sbjct: 419 TTLIDGYCKEEELDMA---MEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 467
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L ++MKE N+ ++ ++SL++ + + G+ E+ AI +EM I+PD + +N
Sbjct: 440 ERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNAL 499
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-ENR 121
+ + + A + + M R ++ D TF+ L S +A +A A+ ++ E
Sbjct: 500 IDGFGKLRQVDKAFEIYDRM-RKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIY 558
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D +Y LI G++G+ ++ Y ++ +R +++ +I DL +
Sbjct: 559 GLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAAS 618
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
K D N +I A + L A E+ E+ ++ G P+ T+ F D
Sbjct: 619 FKIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFID 677
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+LEK K+L + ++ FN+ + K EK+ ++ EM++ I P T N +
Sbjct: 656 VLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGCCG 715
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA 111
I ER M + R+ D TFS L YV L +KA
Sbjct: 716 RRGKIDLMERGF-HMFHEKRLEPDSVTFSLLIENYVSHHLLDKA 758
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 76/194 (39%), Gaps = 5/194 (2%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV--- 103
M+ I P+ YTY+ + L A M R +A + T++ + I
Sbjct: 338 MREEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCK 397
Query: 104 --EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ G +A L+E+ + D+ Y LI + + ++++ ++ A
Sbjct: 398 RNDCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPN 457
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
N Y ++I + A F+E D+ N +I + K +++ A E+ +
Sbjct: 458 NYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYD 517
Query: 222 RARRRGADPNAKTW 235
R R+ P+ T+
Sbjct: 518 RMRKLQIQPDRITF 531
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 145/355 (40%), Gaps = 42/355 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
A A E M+ + ++ F SL+ YA + ++EMK+ + TY++
Sbjct: 259 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSIL 318
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-- 120
+ A +ND A+ + +E K + + +SN+ + ++G E+AE ++E+E
Sbjct: 319 ISGFAKINDSQSADNLFKEAKTK-LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDG 377
Query: 121 ------------------RNAHRDLS---------------AYQFLITLYGQTGNLSEVY 147
+N ++ L +Y L+ LY + G +++
Sbjct: 378 IDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKAL 437
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
I + + N +Y +I ++L D A F+E D + N++I A+
Sbjct: 438 SISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAF 497
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
K G ++ A + E+ ++ P+ + + + Y GDMK A+D L+ +G
Sbjct: 498 CKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG----- 552
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
VP+ T + ++ V A L+ + A + ++R YAA+G
Sbjct: 553 -CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 606
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 110/258 (42%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A+ E+M L +N L+ + K G+ ++ I+++M+ + P + + +
Sbjct: 471 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 530
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A D+ A ++ M+R G V T++ L V ++A L ++
Sbjct: 531 GYAVAGDMKSALDTLDLMRRSGCVPT-VMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 589
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y ++ Y +G++ + + + ++ + Y +++ + A
Sbjct: 590 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 649
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E + + N++I +A+ G + AE+L ++ + G PN T+ + + +
Sbjct: 650 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 709
Query: 245 NGDMKLAVDCLEKAIDTG 262
GDM+ A +E+ +D G
Sbjct: 710 AGDMQRAEKVIEEMVDVG 727
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 1/249 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + E++KE S + + L+ LY K G K +I +EM++ I ++ TY++ +
Sbjct: 400 KCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLI 459
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++D + A + EEM R G + D ++ L + + G ++A L++++
Sbjct: 460 NGFIHLHDFANAFAIFEEMLRSG-LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERM 518
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
A++ +I Y G++ +R + ++Y +I LV + A
Sbjct: 519 QPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVS 578
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ T + +++ YA G + A E + + G + +E
Sbjct: 579 VLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACC 638
Query: 244 RNGDMKLAV 252
++G M+ A+
Sbjct: 639 KSGRMQSAL 647
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 127/337 (37%), Gaps = 44/337 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L+ +M+E + ++S+M Y + K + + +K P +Y
Sbjct: 364 ERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCL 423
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ A + +EM+ G + + T+S L + ++ F A +E+
Sbjct: 424 LNLYVKIGKVAKALSISKEMESCG-IKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 482
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + Y LI + + GN+ I ++ +N ++ +I+
Sbjct: 483 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE------------ 530
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
YA G +++A + + RR G P T+
Sbjct: 531 -----------------------GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 567
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+R ++ AV L+K G P+ T MR + D+ A + +K++
Sbjct: 568 VRKHKVQRAVSVLDKMSIAG------ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 621
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVM--LRRLKMEKV 337
L V ++E L+R +GR + R + +K+
Sbjct: 622 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 658
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA K+KE L + +L+ K+G + A+ +EM I +++ YN+ +
Sbjct: 610 KAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 669
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A D+ AE ++++MK DG V + T+++ + +AG ++AE+ ++E+ +
Sbjct: 670 DGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 728
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
++ Y LI + + + + ++LA SY ++ L++
Sbjct: 729 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLS 779
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A+ +M + ++ +N L+ +A+ G + ++++MK + P+ +TY +
Sbjct: 644 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSY 703
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A D+ AE+VIEEM G + + T++ L + L ++A + +E++
Sbjct: 704 INACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG 762
Query: 123 AHRDLSAYQFLIT 135
D ++Y L+T
Sbjct: 763 LKPDEASYHCLVT 775
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 133/332 (40%), Gaps = 43/332 (12%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L++ MK N+ S F L+ Y + G + M+ +PD +++ + L+
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLS 232
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
S A+ + +K R D ++NL + AG +AE+ KE++ ++
Sbjct: 233 RKRRASEAQSFFDSLK--DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNV 290
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y +I + G +S + ++ +
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADM---------------------------------- 316
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+SGCA I N+M + K GR E ++ + ++ G +P+ T+ + + R+ +
Sbjct: 317 LDSGCAPNAITFNNLM-RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDEN 375
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
++ AV L I K ++ T T R+ E+++DV+GA + +A +
Sbjct: 376 LENAVKVLNTMIK------KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPN 429
Query: 308 VEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEV 339
+ L+R + + T V+ + +M+ EV
Sbjct: 430 TVTYNILMRMFVGSKSTDMVLKMKKEMDDKEV 461
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ + + G + + +EMK + I P+ YTY++ + AL IS A V +M
Sbjct: 258 YTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML 317
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A + TF+NL ++V+AG EK + +++ D Y FLI + + NL
Sbjct: 318 DSG-CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENL 376
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMI-QVLVNLKDLPGAEKCF-KEWESGC----ATYDI 197
++ ++ + N S N I + + +D+ GA + + K E+ C TY+I
Sbjct: 377 ENAVKVLNTM-IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNI 435
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ + +G+ + + L+ +E+ ++ +PN T+ + + G
Sbjct: 436 -LMRMFVGSKSTDMVLKMKKEMDDKE----VEPNVNTYRLLVTMFCGMG 479
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 100/227 (44%), Gaps = 6/227 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A + M + +++ FN+LM ++ K G EK+ + +MK PD+ TYN +
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A ++ A +V+ M + + + +TF+ + + A R ++
Sbjct: 368 EAHCRDENLENAVKVLNTMIK-KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC 426
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y L+ ++ + + V ++ + + + PN +Y ++ + + A
Sbjct: 427 EPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVN--TYRLLVTMFCGMGHWNNA 484
Query: 182 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
K FKE E C T + + +++ + G+L+ EEL E+ ++G
Sbjct: 485 YKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/260 (17%), Positives = 104/260 (40%), Gaps = 2/260 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE + ++MK + + ++ ++ + G + + +M S P++ T+N M
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R +V +MK+ G D T++ L + E A + L + +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLG-CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC 391
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ S + + + +++ +R++ + A ++Y ++++ V K K
Sbjct: 392 EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLK 451
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERARRRGADPNAKTWEIFSDYY 242
KE + ++ +++ + G NA +L KE + P+ +E+
Sbjct: 452 MKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQL 511
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
R G +K + +EK I G
Sbjct: 512 RRAGQLKKHEELVEKMIQKG 531
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 45/226 (19%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
+ YN + V A +I+ MK V TF+ L YV AGL +A
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRN-VEISIETFTILIRRYVRAGLASEAVHCFN 210
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVNL 175
+E+ D A+ +I+ + SE + SL+ F P+ I Y N+++
Sbjct: 211 RMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDV--IVYTNLVR----- 263
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ + G + AE++ + + G +PN T+
Sbjct: 264 ------------------------------GWCRAGEISEAEKVFKEMKLAGIEPNVYTY 293
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
I D R G + A D +D+G P++ T MR
Sbjct: 294 SIVIDALCRCGQISRAHDVFADMLDSG------CAPNAITFNNLMR 333
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 102/236 (43%), Gaps = 1/236 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L E+MK L ++ +NS++ Y K G + +EMK+ S PD TYN
Sbjct: 150 EAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTL 209
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + EMK+ G + + ++S L + + + ++A + ++
Sbjct: 210 INCFCKFGKLPKGLEFFREMKQSG-LKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG 268
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y L+ Y + GNLS+ +R+ + ++Y +I L +++ + AE
Sbjct: 269 LVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAE 328
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ F + + ++ +I + K ++ A EL + + RG P+ + F
Sbjct: 329 ELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTF 384
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 123/300 (41%), Gaps = 7/300 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A KMK + + N L+ +A+ G + + ++M + P +TYN
Sbjct: 78 MFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYN 137
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + DI A + EEMK G + D T++++ Y + G + +E+++
Sbjct: 138 IMIDCMCKEGDIEAASGLFEEMKFRGLI-PDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ Y LI + + G L + +R ++ + +SY ++ +
Sbjct: 197 MSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQ 256
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K + + + ++ AY K G L +A L + + G + N T+ D
Sbjct: 257 ALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALID 316
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+K A + K + G +P+ + + F + K++D A L+ +K
Sbjct: 317 GLCDVERIKEAEELFGKMVTAG------VIPNLASYTALIHGFVKAKNMDRALELLDEMK 370
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 98/238 (41%), Gaps = 6/238 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L KM + + + +L+ + K + ++ ++ EMK I PD Y +
Sbjct: 325 KEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTF 384
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +L + I A+ V+ EM+ G + A+ ++ L Y ++ +E E
Sbjct: 385 IWSLCGLEKIEAAKVVMNEMQEKG-IKANTFIYTTLMDAYFKSE--NPSEGLHLLEEMLE 441
Query: 123 AHRDLSAYQFLITLYGQTGN--LSEVYRIWRSLRLAFPNTANIS-YLNMIQVLVNLKDLP 179
+++A F + + G N +S+ + + F AN + Y MI L +
Sbjct: 442 LDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVE 501
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A F++ D +I K+G + A L+++ G + A+ ++
Sbjct: 502 AATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGARFGDL 559
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 7/258 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A ALL++MK+ + + +N L+ ++ +++ + +P TYN
Sbjct: 488 DNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSI 547
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A V ++M+ G + + T+++ Y G + A + L ++ R
Sbjct: 548 INGFVKAGMMGSAFTVYQQMREKG-LPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---LAFPNTANISYLNMIQVLVNLKDLP 179
D+ AY LI + Q GN+S ++ L LA PNT + Y ++I NL +
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLA-PNT--VVYNSLITGYKNLNMMK 663
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
K ++ G D +I ++K+G + A EL +G P+A T+ +
Sbjct: 664 EVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALT 723
Query: 240 DYYLRNGDMKLAVDCLEK 257
R+GD+ A LE+
Sbjct: 724 HGLCRSGDIDGAKKLLEE 741
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 49/337 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A AL +M+ + F++LM+ K G E + EM + I PD Y +
Sbjct: 174 KDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALA 233
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + D A R++ EMK G D+ T+ + + V+ G E+A R E+ +
Sbjct: 234 ITALCKLGDGGRALRMLREMKEVGFDTCDF-TYRTMVDVLVKTGRMEEALRVNDEMRDAG 292
Query: 123 AHRDLSA-----------------------------------YQFLITLYGQTGNLSEVY 147
D+ Y LI Q G + Y
Sbjct: 293 KKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAY 352
Query: 148 RIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMI 204
+ R + + P+T +S + ++ L+N + A F+E +SG D+ N +I
Sbjct: 353 ELCRQMTGQGLLPSTFELSLV--LKGLLNDRRWKDAVCLFEEMADSGLP--DVFTYNNLI 408
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
+ + +L A L +R ++ G P+ T+ Y + G M AV + G
Sbjct: 409 HWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG-- 466
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ P+ T T MR + +KD D A L+ +K+
Sbjct: 467 ----FKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/238 (18%), Positives = 105/238 (44%), Gaps = 1/238 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A + ++M+E L + + + S + Y +TG + ++ +++ + PD YN
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ++S A +++ + +DG +A + +++L + Y + ++ + + +
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDG-LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIK 674
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D S Y LI + + GN++ ++ + ++ + L D+ G
Sbjct: 675 GGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDG 734
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A+K +E ++ + N++I Y ++ +L+ A L + G P+ T++I
Sbjct: 735 AKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDIL 792
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 119/321 (37%), Gaps = 43/321 (13%)
Query: 33 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 92
+ G +K + ++M ++P ++ ++ ++ L A + EEM G D
Sbjct: 344 QVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG--LPDV 401
Query: 93 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
T++NL + +A +A ++ ++ Y L+ Y + G + E +++
Sbjct: 402 FTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSE 461
Query: 153 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCA----TYDIRVT------- 200
+ + ++Y+ +++ + KD A E ++G + TY++ +
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR 521
Query: 201 -----------------------NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
N +I + K G + +A + ++ R +G PN T+
Sbjct: 522 VCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTS 581
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
F D Y R G +A+ L G P + F QE ++ A L
Sbjct: 582 FIDGYCRTGCSDMALKMLNDVRRRG------LQPDIVAYNALINGFCQEGNMSHALQLLV 635
Query: 298 ILKKAVDDLGVEVFEPLIRTY 318
IL K V+ LI Y
Sbjct: 636 ILLKDGLAPNTVVYNSLITGY 656
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 9 LEKMKELNLGFSSM----------PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 58
L MKE++ + SM + +L+ ++K G+ + EM A +PD++T
Sbjct: 659 LNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFT 718
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ L DI GA++++EEM+R V + ++ L + Y+ ++A R E+
Sbjct: 719 FTALTHGLCRSGDIDGAKKLLEEMRRLD-VRPNVFIYNMLINGYLRDCKLQEAFRLHDEM 777
Query: 119 ENRNAHRDLSAYQFLIT 135
N D + Y L++
Sbjct: 778 LNMGIQPDDTTYDILVS 794
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 144 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 203
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + I A + +EM G V + TF+ L + + G + A K++ +++
Sbjct: 204 GLCKESKIDDANELFDEMLVKGLVP-NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 262
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A +
Sbjct: 263 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEH 322
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D V +I +EG +AE++ G P+A+T+ + + + +
Sbjct: 323 RKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 382
Query: 245 NGDM 248
GD+
Sbjct: 383 KGDV 386
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 89/236 (37%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L +S+ F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 212 DDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 271
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM G + D T++ L + G + A K + N
Sbjct: 272 IYGLCKKGDLKQAHHLIDEMSMKG-LKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQEN 330
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + G + AE
Sbjct: 331 TRLDDVVYTALISGLCREGXSVD-----------------------------------AE 355
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E S D R ++I + K+G + +L + +R G P+ T+ +
Sbjct: 356 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 411
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 80/197 (40%), Gaps = 1/197 (0%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + + G + +++ L + Y+ G ++ R
Sbjct: 126 YFFNILMHRFCKDGDIRIAQSVFDAITKWG-LRPSVVSYNTLMNGYIRLGDLDEGFRLKS 184
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ D+ Y LI + + + ++ + + ++++ +I
Sbjct: 185 AMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNG 244
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ A + +K+ S + D+ N +I K+G L+ A L + +G P+ T+
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYT 304
Query: 237 IFSDYYLRNGDMKLAVD 253
D ++GD+ A +
Sbjct: 305 TLIDGCCKDGDLDTAFE 321
>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 426
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM+ + +++L+ L K K +I +K S I PD YN
Sbjct: 24 LFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVVYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V D +++ L ++YVE F +A E+
Sbjct: 84 SMINVFGKAKLFREARSLICEMRTXG-VMPDTVSYTTLLTMYVENKKFIEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ S+R +SY +++V + +
Sbjct: 143 IKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PNA T+
Sbjct: 203 AXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A EK +G
Sbjct: 263 IWGKVGKLDRAAMLFEKLRSSG 284
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 5/262 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A+ L M++L + + + +N+L+ +Y+ + + + M+ I + TYN
Sbjct: 164 MAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYN 223
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
M + A +I+EM+ G + + T+S + SI+ + G ++A ++L +
Sbjct: 224 SMMMIYGKTLEHEKANNLIQEMQSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFEKLRS 282
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D YQ +I Y + G +S R+ L+ P+ NI IQ+L +
Sbjct: 283 SGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELKT--PD--NIPRDTAIQILAGSGRMEE 338
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F++ DI V MI ++K + N E+ ++ R G P++ + +
Sbjct: 339 ATWVFRQAIDAGEVKDITVFEQMIDLFSKYRKYSNVVEVFDKMRGLGYFPDSNVIALVLN 398
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y + D + A D + D G
Sbjct: 399 AYGKLHDFEKANDVYLEMQDEG 420
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +++ ++++++++ K G ++ + +++++S I D Y
Sbjct: 236 EKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +S A+R++ E+K + D T LA +G E+A ++ +
Sbjct: 296 IVAYERAGLVSHAKRLLHELKTPDNIPRD-TAIQILAG----SGRMEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVN----LK 176
+D++ ++ +I L+ + S V ++ +R FP++ N+I +++N L
Sbjct: 351 EVKDITVFEQMIDLFSKYRKYSNVVEVFDKMRGLGYFPDS------NVIALVLNAYGKLH 404
Query: 177 DLPGAEKCFKEWES-GCATYD 196
D A + E + GC D
Sbjct: 405 DFEKANDVYLEMQDEGCVFSD 425
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 132/311 (42%), Gaps = 28/311 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA L M E FN+++ + K+ EK + + ++ + D+ TYNV
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVI 201
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A V++EM G + + TT++ + + AG A E++ R+
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERG-INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y ++ +G G + ++ + P+ A +Y MIQVL ++
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA--TYNAMIQVLCKKDNVEN 318
Query: 181 AEKCFKE-----WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A F+E +E TY NV+I G EEL +R G +PN +T+
Sbjct: 319 AVVMFEEMVRRGYEPNVTTY-----NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT-----FMRHFEQEKDVD 290
+ YY +++ A+ EK G GD +P+ +T F+R ++ V
Sbjct: 374 NMMIRYYSECSEVEKALGLFEK---MGSGD---CLPNLDTYNILISGMFVRKRSEDMVVA 427
Query: 291 GAEGFL-EILK 300
G + F EIL+
Sbjct: 428 GNQAFAKEILR 438
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 117/291 (40%), Gaps = 8/291 (2%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+L+ +M+ L +G S F + YA G P+K + M D ++N + L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A + ++ GR + D T++ + + + KA LKE+ R + +
Sbjct: 172 CKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPN 229
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
L+ Y ++ + + G + + + ++ ++Y ++ ++ A F
Sbjct: 230 LTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFD 289
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E + N MI K+ +ENA + E RRG +PN T+ + G
Sbjct: 290 EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ + +++ + G P+ +T +R++ + +V+ A G E
Sbjct: 350 EFSRGEELMQRMENEG------CEPNFQTYNMMIRYYSECSEVEKALGLFE 394
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 1/214 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KA +L++M E + + +N+++ + + G EMK D TY
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +I A V +EM R+G V T++ + + + E A +E+ R
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREG-VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+++ Y LI G S + + + +Y MI+ ++ A
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 215
F++ SG ++ N++I R E+
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 112/286 (39%), Gaps = 50/286 (17%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ L ++M L + + + + K G+P K + +EMKA PD TYNV +
Sbjct: 436 AKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN 495
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A ++++M+ +G + D T++++ ++ +GL KAE ++ + H
Sbjct: 496 GLCKLGNFDDANELVQKMRLEG-IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIH 554
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y LI Y G RL F A+K
Sbjct: 555 PSVVTYTVLIHSYAVRG------------RLDF-----------------------AKKY 579
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF----SD 240
F E + + ++ N +I KE ++ A L +G PN T+ I S+
Sbjct: 580 FDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSN 639
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 286
+KL D L++ I P S T M+H ++
Sbjct: 640 LQYWQDALKLYKDMLDREIK----------PDSCTHSALMKHLSKD 675
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 138/327 (42%), Gaps = 19/327 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ L+E+M L L S+ +N L+ + K E+ + +EM +P TYN
Sbjct: 259 DRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTI 318
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M +L + +S A R ++ M + + D +++ L Y G F +A EL ++N
Sbjct: 319 MYSLCRLGRVSDARRYLDVMVNED-LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI +TGNL + + +++ +++ + +LP A+
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK 437
Query: 183 KCFKEWES-----GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ F E S C Y R+ + K G A +KE + G P+ T+ +
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGEL-----KLGNPSKAFGMKEEMKAEGFPPDLITYNV 492
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR-HFEQEKDVDGAEGFL 296
+ + G+ A + ++K R +G VP T + + H E F
Sbjct: 493 LINGLCKLGNFDDANELVQKM----RLEG--IVPDHVTYTSIIHAHLISGLLRKAEEVFS 546
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGR 323
++LKK + V + LI +YA GR
Sbjct: 547 DMLKKGIHP-SVVTYTVLIHSYAVRGR 572
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 3/233 (1%)
Query: 5 AEALL--EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
AEALL +++ NL S + +N+L+ +TG+ + + +M + PD T+ +
Sbjct: 364 AEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTIL 423
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R + ++ A+ + +EM G + D ++ ++ G KA +E++
Sbjct: 424 VRGFCQMGNLPMAKELFDEMLSRG-LKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEG 482
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL Y LI + GN + + + +RL +++Y ++I + L AE
Sbjct: 483 FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ F + + V+I +YA GRL+ A++ + + +G PN T+
Sbjct: 543 EVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITY 595
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 113/263 (42%), Gaps = 3/263 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + E + M + + + + FN++M K G + ++ M+ P+ +YN
Sbjct: 187 MVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYN 246
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
V + L+ + A+ +IE+M G +V+A T++ L + + +FE+A +E+
Sbjct: 247 VLVNGLSGKGEFDRAKELIEQMSMLGLKVSAH--TYNPLIRGFCKKEMFEEANDLRREML 304
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
R A + Y ++ + G +S+ R + +SY +I L +
Sbjct: 305 GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F E S + N +I + G L+ A+ +K+ + G P+ T+ I
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
+ + G++ +A + ++ + G
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRG 447
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 125/285 (43%), Gaps = 11/285 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+E+ +L MK + + +N+++++ G + + + QEMK+ PD T+N
Sbjct: 436 SEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNT 495
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A AE++ +EM G T++ L + G + AE +K+++N+
Sbjct: 496 LITASGRCGSDIDAEKIYDEMLEAG-FTPSVATYNALLNALARRGDWRTAESVIKDMKNK 554
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLK--D 177
++Y ++ Y + G + + RI + + FP+ + L +L N K
Sbjct: 555 GFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTL----ILANFKCRA 610
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
L G E+ F+ + D+ V N M+ ++++ + A E+ + G P+ T+
Sbjct: 611 LAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNS 670
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
D Y R G+ A + L + ++ GD + + I+ F R
Sbjct: 671 LMDLYARGGECWKAEEILRELQNS--GDKSDLISYNTVIKGFCRQ 713
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 147/350 (42%), Gaps = 14/350 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
E+A A+ EKM E L + + +N ++ +Y K G KI ++ EM++ + D +T +
Sbjct: 226 ERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCST 285
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + A+ +K G A T++ L ++ +AG++ +A +KE+E+
Sbjct: 286 VISACGREGLLDEAKEFFVGLKSQG-YAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDN 344
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N D Y L+ Y + G E + ++ ++Y MI + A
Sbjct: 345 NCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKA 404
Query: 182 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ + ESGCA ++ N ++G K+ + E ++ + G PN TW
Sbjct: 405 LSLYDQMKESGCAP-NVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLS 463
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ-EKDVDGAEGFLEIL 299
G K ++ G + P +T T + + D+D + + E+L
Sbjct: 464 MCGNKGMHKYVKRVFQEMKSCG------FEPDRDTFNTLITASGRCGSDIDAEKIYDEML 517
Query: 300 KKAVDDLGVEVFEPLIRTYAAAG--RTSPVMLRRLKMEKVEVSEASKKLL 347
+ V + L+ A G RT+ +++ +K + + SE S L+
Sbjct: 518 EAGFTP-SVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLI 566
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 1/256 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE++++ MK S ++ ++ YAK G+ + I I +++ I P +
Sbjct: 544 AESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLIL 603
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A ++G ER + +++ G D F+++ S++ + ++A + ++
Sbjct: 604 ANFKCRALAGMERAFQALQKHG-YKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQ 662
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y L+ LY + G + I R L+ + + ISY +I+ + A +
Sbjct: 663 PDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRT 722
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E S I N +G YA +G +E+ + PN T++I D Y +
Sbjct: 723 LSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCK 782
Query: 245 NGDMKLAVDCLEKAID 260
K A+D + D
Sbjct: 783 AKKFKEAMDFVSTITD 798
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 132/317 (41%), Gaps = 42/317 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ AL++ M E + +++ + +++ Y + +K ++ +MK S P+ TYN
Sbjct: 367 EEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAI 426
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + +++ +MK DG A + T++ + S+ G+ + +R +E+++
Sbjct: 427 LGMLGKKSQSEEMMKILCDMKVDG-CAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCG 485
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + LIT G+ G S++ AE
Sbjct: 486 FEPDRDTFNTLITASGRCG--SDI---------------------------------DAE 510
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K + E T + N ++ A A+ G AE + + + +G P+ ++ + + Y
Sbjct: 511 KIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSY 570
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G +K ++ +EK I G PS +RT + + + + G E + L+K
Sbjct: 571 AKGGYVK-GINRIEKDIYDGH-----IFPSWMLLRTLILANFKCRALAGMERAFQALQKH 624
Query: 303 VDDLGVEVFEPLIRTYA 319
+ VF ++ ++
Sbjct: 625 GYKPDLVVFNSMLSMFS 641
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 96/242 (39%), Gaps = 1/242 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE + ++M E S +N+L+ A+ G ++I++MK P +Y++ +
Sbjct: 509 AEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILN 568
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A + G R IE+ DG + W L + ERA + L+
Sbjct: 569 SYAKGGYVKGINR-IEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYK 627
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL + +++++ + + I ++ ++Y +++ + + AE+
Sbjct: 628 PDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEI 687
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E ++ D+ N +I + ++G + A RG P T+ F Y
Sbjct: 688 LRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAA 747
Query: 245 NG 246
G
Sbjct: 748 KG 749
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 43/243 (17%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV----NDISGAERVI 79
+ +++ Y++ G E+ AI ++M S + P TYNV + + N I G ++
Sbjct: 212 YTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILG---LL 268
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
+EM+ G + D T S + S GL ++A+ L+++ Y L+ ++G+
Sbjct: 269 DEMRSKG-LGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGK 327
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
G SE I KE E D
Sbjct: 328 AGIYSEALSI-----------------------------------MKEMEDNNCPPDAVT 352
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
N ++ AY + G E L + G PNA T+ + Y R + A+ ++
Sbjct: 353 YNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMK 412
Query: 260 DTG 262
++G
Sbjct: 413 ESG 415
>gi|115440379|ref|NP_001044469.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|20804913|dbj|BAB92593.1| drought-inducible protein 1OS [Oryza sativa Japonica Group]
gi|37179506|gb|AAN05726.2| drought-inducible protein 1OS [Oryza sativa Indica Group]
gi|113534000|dbj|BAF06383.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|125527974|gb|EAY76088.1| hypothetical protein OsI_04014 [Oryza sativa Indica Group]
gi|125572269|gb|EAZ13784.1| hypothetical protein OsJ_03709 [Oryza sativa Japonica Group]
gi|215704731|dbj|BAG94759.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717015|dbj|BAG95378.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 434
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 38/240 (15%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS--SIMPDSYTYNVWMRALAAVNDISGAER 77
S+M FNSL+ Y + G E + A +E+ S S++P Y+YN+ ++AL V D+S A
Sbjct: 161 STMTFNSLLAAYVEAGEFEALAAAFKEIPVSNPSVVPSVYSYNILLQALCKVPDLSAALD 220
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
+ M++ G ++ D TF+ L + + G + AE+ + + RN D Y +
Sbjct: 221 TMTLMEKSG-ISPDLVTFNTLLNGFYNHGDMDGAEKVWEMITERNMVPDAKNYNAKLRGL 279
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
G + + + + P ISY
Sbjct: 280 VAQGRIEDAVAVVEKMEKDGPKPDTISY-------------------------------- 307
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
N +I Y K+GRLE A++L E G N T+ ++ G++ A+ C +
Sbjct: 308 ---NELIRGYCKDGRLEEAKKLFEDMAENGYVANRGTYHTLIPCLVKAGELDYALKCCHE 364
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 6/184 (3%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG--QTGNLSEVYRIWR 151
TF++L + YVEAG FE A KE+ N S Y + I L + +LS
Sbjct: 164 TFNSLLAAYVEAGEFEALAAAFKEIPVSNPSVVPSVYSYNILLQALCKVPDLSAALDTMT 223
Query: 152 SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
+ + + +++ ++ N D+ GAEK ++ D + N + +G
Sbjct: 224 LMEKSGISPDLVTFNTLLNGFYNHGDMDGAEKVWEMITERNMVPDAKNYNAKLRGLVAQG 283
Query: 212 RLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAIDTGRGDGG 267
R+E+A + E+ + G P+ ++ Y ++G + KL D E RG
Sbjct: 284 RIEDAVAVVEKMEKDGPKPDTISYNELIRGYCKDGRLEEAKKLFEDMAENGYVANRGTYH 343
Query: 268 KWVP 271
+P
Sbjct: 344 TLIP 347
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE + E + E N+ + +N+ + G E A++++M+ PD+ +YN +R
Sbjct: 253 AEKVWEMITERNMVPDAKNYNAKLRGLVAQGRIEDAVAVVEKMEKDGPKPDTISYNELIR 312
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A+++ E+M +G V A+ T+ L V+AG + A + E+ +N
Sbjct: 313 GYCKDGRLEEAKKLFEDMAENGYV-ANRGTYHTLIPCLVKAGELDYALKCCHEIYGKNLR 371
Query: 125 RDLSAYQFLIT 135
D Q ++T
Sbjct: 372 VDCFVLQEVVT 382
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A + KMK++ + + + +N+++ K G ++ + EM + I D Y+YN
Sbjct: 191 TRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNS 250
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +V A ++++EM G+V D TF+ L + G +A + + R
Sbjct: 251 MIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKR 310
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
D+ +Y L+ Y +G++ E +++ + R A PN ISY +I ++ +
Sbjct: 311 GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNV--ISYCTLINGYCKVRMVD 368
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A E + D N ++ +K GR +L E R G + T+ +
Sbjct: 369 EAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLL 428
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA--EGFLE 297
D Y ++ A+ + I+ G S IRT+ +DG G L+
Sbjct: 429 DDYFKHEKFDKALALFQHIIEIG---------ISPNIRTY------NILLDGLCKSGRLK 473
Query: 298 ILKKAVDDLGVEVFEPLIRTY 318
K+ L + +P IRTY
Sbjct: 474 YAKEIFQLLSAKGCQPNIRTY 494
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 127/317 (40%), Gaps = 43/317 (13%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTY 59
+ ++A L +M E + +NS++ + G + ++ EM + PD YT+
Sbjct: 225 LVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTF 284
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N+ + L + +S A V+ M + G D +++ L + Y +G +A++ ++
Sbjct: 285 NILIDGLCKLGRVSEAYNVVAVMIKRGW-KPDIVSYNALMNGYCLSGSVGEAKQVFDKMV 343
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL----------- 166
R A ++ +Y LI Y + + E + + + P+T + L
Sbjct: 344 ERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSL 403
Query: 167 ----------------NMIQVLVNLKDLPGAEK------CFKEWESGCATYDIRVTNVMI 204
++I V L D EK F+ + +IR N+++
Sbjct: 404 YEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILL 463
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
K GRL+ A+E+ + +G PN +T+ I + G + A L K ++
Sbjct: 464 DGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVN---- 519
Query: 265 DGGKWVPSSETIRTFMR 281
++P+ T T +R
Sbjct: 520 --NNYLPNYITFDTIVR 534
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 20/306 (6%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A +L+ M L + + + +N+L+ K+G E+ ++EM +S +PDS TY
Sbjct: 618 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 677
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + A +++ E+K G D T++ L ++G E+A L+E+ +
Sbjct: 678 LVYALCRASRTDDALQLVSELKSFGW-DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGK 736
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW-----RSLRLAFPNTANISYLNMIQVLVNLK 176
H D+ Y LI + G+L E R+ R R PN ++Y +I L +
Sbjct: 737 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNV--VTYSVLINGLCKVG 794
Query: 177 DLPGAEKCFKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA---DPN 231
+ A + +E +S +I N + K+ + A EL R+ R G+ P+
Sbjct: 795 RIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELM-RSLRDGSLRVSPD 853
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
T+ D + G A + + I G +VP+ T M + ++
Sbjct: 854 TVTFSTLIDGLCKCGQTDEACNVFDDMI------AGGYVPNVVTYNVLMNGLCKTDKMER 907
Query: 292 AEGFLE 297
A +E
Sbjct: 908 AHAMIE 913
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 104/256 (40%), Gaps = 6/256 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A AL E+M NL M F +L+ K G E I+ M + P+ TYN
Sbjct: 584 EQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 643
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L I A + +EEM G V D T+ +L A + A + + EL++
Sbjct: 644 VHGLCKSGRIEEACQFLEEMVSSGCV-PDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y L+ ++G + + + + ++Y +I L DL A
Sbjct: 703 WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR 762
Query: 183 KCFKEWE---SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD--PNAKTWEI 237
+ + S C ++ +V+I K GR++ A EL + R+ D PN T+
Sbjct: 763 RLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNS 822
Query: 238 FSDYYLRNGDMKLAVD 253
F D + M A +
Sbjct: 823 FLDGLCKQSMMAEACE 838
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 108/251 (43%), Gaps = 10/251 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+ A L+ ++K ++ +N L+ K+G E+ +++EM PD TYN
Sbjct: 688 TDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNT 747
Query: 62 WMRALAAVNDISGAERVIEEM-KRDGRVAA-DWTTFSNLASIYVEAGLFEKAERALKELE 119
+ +L D+ A R+ +M R R + T+S L + + G ++A ++E+
Sbjct: 748 LIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMM 807
Query: 120 NRNAH--RDLSAYQFLITLYGQTGNLSEVYRIWRSLR----LAFPNTANISYLNMIQVLV 173
++ ++ Y + + ++E + RSLR P+T +++ +I L
Sbjct: 808 RKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDT--VTFSTLIDGLC 865
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
A F + +G ++ NV++ K ++E A + E +G P+
Sbjct: 866 KCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925
Query: 234 TWEIFSDYYLR 244
T+ + D + +
Sbjct: 926 TYSVLVDAFCK 936
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 98/246 (39%), Gaps = 5/246 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AEALL+ M + + + FN + +K G + + M ++PD T+N+ +
Sbjct: 519 QAEALLDAMPDPD----TYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI 574
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ A + EEM + D TF L +AG E A L + N
Sbjct: 575 AGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 633
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ Y L+ ++G + E + + + +I+Y +++ L A +
Sbjct: 634 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 693
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E +S D N+++ K G+ E A + E +G P+ T+ D
Sbjct: 694 LVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLC 753
Query: 244 RNGDMK 249
+ GD++
Sbjct: 754 KAGDLE 759
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 7/238 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L E++ E + +N+L+ K G E+ + +M + S +P+ TY+V + L
Sbjct: 238 LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLC 297
Query: 68 AVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAERALKELENRN--AH 124
V I A +I+EM R V + T+++ + + +A ++ L + +
Sbjct: 298 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 357
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAE 182
D + LI + G + E ++ + PN I+Y ++ L + A
Sbjct: 358 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV--ITYNALVNGLCKADKMERAH 415
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ T D+ +V++ A+ K R++ A EL RG PN T+ D
Sbjct: 416 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 10/247 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS---SIMPDSYT 58
TE+A +LE+M + +N+L+ K G E+ + +M + +P+ T
Sbjct: 723 TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVT 782
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDG-RVAADWTTFSNLASIYVEAGLFEKAERALKE 117
Y+V + L V I A +I+EM R V + T+++ + + +A ++
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842
Query: 118 LENRN--AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLV 173
L + + D + LI + G E ++ + PN ++Y ++ L
Sbjct: 843 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNV--VTYNVLMNGLC 900
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+ A + T D+ +V++ A+ K ++ A EL RG PN
Sbjct: 901 KTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVV 960
Query: 234 TWEIFSD 240
T+ D
Sbjct: 961 TFNSIID 967
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 121/343 (35%), Gaps = 52/343 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA------------------ 65
FN + L K+G P K + + P+ +TY+ +RA
Sbjct: 114 FNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRI 173
Query: 66 -------------LAAVNDISGAERVIE----EMKRDGRVAADWTTFSNLASIYVEAGLF 108
L ++ R +E EM RDG VA T++ + + ++
Sbjct: 174 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDG-VAPTIVTYNTIINGLCKSNEL 232
Query: 109 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW--RSLRLAFPNTANISYL 166
+EL R H D+ Y LI + G+L E R+ S R PN ++Y
Sbjct: 233 GAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNV--VTYS 290
Query: 167 NMIQVLVNLKDLPGAEKCFKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
+I L + + A + +E +S +I N + K+ A EL R+
Sbjct: 291 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSL 349
Query: 225 RRGA---DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
R G+ P+ T+ D + G + A + I G +VP+ T +
Sbjct: 350 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI------AGGYVPNVITYNALVN 403
Query: 282 HFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
+ ++ A +E + V + L+ + A R
Sbjct: 404 GLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 446
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD+Y +N + L+ + D+S A + E++ + D TF+ L + +AG FE+A
Sbjct: 1024 PDTYAFNCCINGLSKLGDVSRALHRMLELE----LVPDKVTFNILIAGACKAGNFEQASA 1079
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
+E+ +N D+ + LI + G + + I
Sbjct: 1080 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 136/303 (44%), Gaps = 8/303 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+++A LLE+M L ++ + L+ ++K G+ +++M +++ PD + YN
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ L+ V + AE ++++ G V D T+S L Y + G EKA++ L+++ N
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVP-DEFTYSGLIHGYCKTGNLEKADQLLRQMLNS 587
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y L+ Y ++ + +V I +S+ + N Y +I+ L +++ A
Sbjct: 588 GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVA 647
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E E D+ + + +I K +E A L + + G +P + D
Sbjct: 648 FMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDG 707
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV-DGAEGFLEILK 300
+ R+GD+ A + + + G VP+ T + + D+ D + + E+L
Sbjct: 708 FCRSGDISRARNVFDSILAKG------LVPNCVTYTALIDGNCKNGDITDAFDLYKEMLD 761
Query: 301 KAV 303
+ +
Sbjct: 762 RGI 764
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA+ LL +M L ++ + L+ Y K+ EK+ +I+Q M S PD++ Y +
Sbjct: 575 EKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIV 634
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R L+ ++ A V+ E++++G V D +S+L S + EKA L E+
Sbjct: 635 IRNLSRSENMEVAFMVLTEVEKNGLVP-DLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y LI + ++G++S ++ S+ + PN ++Y +I D+
Sbjct: 694 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNC--VTYTALIDGNCKNGDITD 751
Query: 181 AEKCFKEW---------------ESGCATY-------------------DIRVTNVMIGA 206
A +KE +GC+ ++ + N ++
Sbjct: 752 AFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHG 811
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWE 236
+ K G+L+ E+L R PNA+T E
Sbjct: 812 FCKRGKLQETEKLLHVMMDREIVPNAQTVE 841
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 118/261 (45%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +A +L++M + + + +++L+ K G + +++EM + PD++TYN
Sbjct: 364 TAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNP 423
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M+ +D GA ++ EM+ G + + ++ + + + G ++A L+E+ +
Sbjct: 424 LMQGHFQQHDKDGAFELLNEMRNSG-ILPNVYSYGIMINGLCQNGESKEAGNLLEEMISE 482
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y LI + + GN+S + A + Y ++I+ L + + A
Sbjct: 483 GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEA 542
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ + + + D + +I Y K G LE A++L + G PNA T+ +
Sbjct: 543 EEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEG 602
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y ++ D + L+ + +G
Sbjct: 603 YFKSNDYEKVSSILQSMLGSG 623
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 121/311 (38%), Gaps = 40/311 (12%)
Query: 47 MKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR---------------------- 84
M+ + I+PD YTY+ ++ A D A++V EEM+R
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 85 ------------DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQF 132
D ++ D T+ L + + ++A+ L E+ ++ Y
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353
Query: 133 LITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGC 192
L+ + + G +E + I + + A I Y N+I+ L + L A K KE
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
D N ++ + ++ + A EL R G PN ++ I + +NG+ K A
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473
Query: 253 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFE 312
+ LE+ I G P++ + +E ++ A LE + KA + +
Sbjct: 474 NLLEEMISEG------LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYN 527
Query: 313 PLIRTYAAAGR 323
LI+ + GR
Sbjct: 528 SLIKGLSTVGR 538
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 107/255 (41%), Gaps = 1/255 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A+ + E+M+ + + + +N +++ ++G E+ +EM + PD++TY
Sbjct: 260 DAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGAL 319
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L + + A+ +++EM G + + + L +++ G +A LKE+ +
Sbjct: 320 MNGLCKGSRLKEAKALLDEMSCSG-LKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAG 378
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + G L ++ + + +Y ++Q D GA
Sbjct: 379 VQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAF 438
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E + ++ +MI + G + A L E G PNA + +
Sbjct: 439 ELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH 498
Query: 243 LRNGDMKLAVDCLEK 257
+ G++ LA + LEK
Sbjct: 499 SKEGNISLACEALEK 513
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 130/314 (41%), Gaps = 7/314 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
A A E M+ + ++ F SL+ YA G + ++EMK+ I TY++
Sbjct: 268 HHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSIL 327
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ND A+ + +E K + +SN+ + ++G ++AE ++E+E
Sbjct: 328 ISGYGKTNDAQSADNLFKEAKTK-LDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG 386
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y ++ Y + + ++ L+ ISY +I + V + +P A
Sbjct: 387 IDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAI 446
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE ES ++ + +++I + NA + E + G P+ + + + +
Sbjct: 447 AISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAF 506
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G+M A+ E R + PS+ T R + F D+ A L++++++
Sbjct: 507 CKMGNMDRAIRIFE------RMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRS 560
Query: 303 VDDLGVEVFEPLIR 316
V + LI
Sbjct: 561 GCAPTVMTYNALIH 574
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 122/302 (40%), Gaps = 13/302 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F ++ YAK G A + M+A I P+++ + + A A D+ GA +EEMK
Sbjct: 254 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMK 313
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + T+S L S Y + + A+ KE + + + + Y +I + Q+GN+
Sbjct: 314 SEG-IEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNM 372
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE--SGCATYDIRVT- 200
+ R + + Y +M+ ++D +KC +E C ++
Sbjct: 373 DRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQD---EKKCLIVFERLKECGFKPTIISY 429
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
+I Y K G++ A + + G N KT+ + + ++ D A E I
Sbjct: 430 GCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIK 489
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
+G P + F + ++D A E ++K F P+I +A
Sbjct: 490 SG------LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAV 543
Query: 321 AG 322
AG
Sbjct: 544 AG 545
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/352 (17%), Positives = 138/352 (39%), Gaps = 42/352 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K + E++KE + + + L+ LY K G K AI +EM++ I ++ TY++
Sbjct: 408 KKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSML 467
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++D + A + E+M + G + D ++ L + + G ++A R + ++
Sbjct: 468 INGFIHLHDFANAFSIFEDMIKSG-LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKER 526
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK------ 176
++ +I + G++ + +R + ++Y +I LV
Sbjct: 527 MQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAV 586
Query: 177 -----------------------------DLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
D+ A + F + + D+ + ++ A
Sbjct: 587 SVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRAC 646
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
K GR+++A + + N + I D + R GD+ A D L++ + G
Sbjct: 647 CKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDG----- 701
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
P+ T +++ + D+ AE ++ + V+ F LI+ +A
Sbjct: 702 -IPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWA 752
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 112/264 (42%), Gaps = 9/264 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L+ +M+E + ++S+M Y +K + + +K P +Y
Sbjct: 373 DRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCL 432
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V + A + +EM+ G + + T+S L + ++ F A +++
Sbjct: 433 INLYVKVGKVPKAIAISKEMESHG-IKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSG 491
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + Y L+ + + GN+ RI+ ++ +N ++ +I+ D+ +
Sbjct: 492 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDM---K 548
Query: 183 KCFKEWE----SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ F + SGCA + N +I ++ ++E A + ++ G PN T+ I
Sbjct: 549 RAFDTLDLMRRSGCAP-TVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTII 607
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTG 262
Y +GD+ A + K ++G
Sbjct: 608 MRGYAASGDIGKAFEYFTKIKESG 631
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 123/298 (41%), Gaps = 7/298 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A ++ E M + L +N L+ + K G+ ++ I + M+ + P + T+ +
Sbjct: 480 AFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIE 539
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A D+ A ++ M+R G A T++ L V EKA L ++
Sbjct: 540 GFAVAGDMKRAFDTLDLMRRSG-CAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIA 598
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y ++ Y +G++ + + + ++ + Y +++ + A
Sbjct: 599 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 658
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E + + N++I +A+ G + A +L ++ + G PN T+ + + +
Sbjct: 659 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCK 718
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
GDM+ A + +++ D G P+ +T T ++ + + D A E +K A
Sbjct: 719 AGDMQRAENVIQEMADVG------LKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSA 770
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 102/260 (39%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A + E+M++ + S+ F ++ +A G ++ + M+ S P TYN
Sbjct: 513 DRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNAL 572
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + + A V+++M G +A + T++ + Y +G KA +++
Sbjct: 573 IHGLVRKHQVEKAVSVLDKMSIAG-IAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESG 631
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y+ L+ ++G + + R + Y +I D+ A
Sbjct: 632 LKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAA 691
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K+ + +I I A K G ++ AE + + G PN KT+ +
Sbjct: 692 DLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGW 751
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
R A+ C E+ G
Sbjct: 752 ARVSLPDRALKCFEEMKSAG 771
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A+ +M + ++ +N L+ +A+ G + ++++MK I P+ +T+ +
Sbjct: 653 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSY 712
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A D+ AE VI+EM G + + TF+ L + L ++A + +E+++
Sbjct: 713 INACCKAGDMQRAENVIQEMADVG-LKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAG 771
Query: 123 AHRDLSAYQFLIT 135
D +AY L+T
Sbjct: 772 LKPDEAAYHCLVT 784
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 36/168 (21%)
Query: 2 TEKAEALLEKM-----------------------------------KELNLGFSSMPFNS 26
EKA ++L+KM KE L + +
Sbjct: 582 VEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYET 641
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+ K+G + A+ +EM I +++ YN+ + A D+ A ++++MK DG
Sbjct: 642 LLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDG 701
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
+ + TF++ + +AG ++AE ++E+ + ++ + LI
Sbjct: 702 -IPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLI 748
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+L+E M+ L S F ++ YA+ ++ ++M + + D YN + L
Sbjct: 182 SLVEAMRCRGL-LSKDTFRLIVRRYARARKVKEAVETFEKMSSFGLKADLSDYNWLIDVL 240
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ + A + +EMKR+GR D T++ L + + +E+ + D
Sbjct: 241 SKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPD 300
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ AY LI+ + ++G E +++R + + Y +I L + + L A K F+
Sbjct: 301 VVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFE 360
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
++ ++ N ++GAY + + ++A ++ + R+ G PNA+T++I Y +++
Sbjct: 361 LSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQ 420
Query: 247 DMKLAVDCLEK 257
++ A + ++
Sbjct: 421 KIEEAYNVFQR 431
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/240 (17%), Positives = 101/240 (42%), Gaps = 2/240 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L++ + K+G ++ + +EM+A+ MP + Y + + L + + A + E K
Sbjct: 304 YGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSK 363
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + T + + Y + F+ A + + E+ + Y ++ ++ +
Sbjct: 364 ASG-FPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKI 422
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E Y +++ + + +Y M+ + + + + A K +K+ + + + + +
Sbjct: 423 EEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSL 482
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I E RLE A + +G P + + + + G + LA D K +DT R
Sbjct: 483 INGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQDMALK-LDTLR 541
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 142/341 (41%), Gaps = 48/341 (14%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI---PAIIQEMKASSIMPDSYTYN 60
KAE +E MK + + + +N+L+ Y K G K+ A ++EM A+ I P+ T+N
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFN 277
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGR--------------------------------- 87
+ +++ A++ EEM++ G
Sbjct: 278 TLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL 337
Query: 88 -VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
+ + T++ L + + + + ++A + ++ + ++ + +I Y + G + E
Sbjct: 338 GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 397
Query: 147 YRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
+ + S+ PN + +Y +I L +DL A++ E E+ D+ N++I
Sbjct: 398 FSLCSSMLDEGILPNVS--TYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 455
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
K + NAE+L G PN T+ D Y G +K A++ R
Sbjct: 456 DGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV------RTRM 509
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVD 304
+ + P+ T ++ + + ++ A G L E+L+K ++
Sbjct: 510 EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 110/294 (37%), Gaps = 44/294 (14%)
Query: 13 KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDI 72
K+ S N L++ K + + +EM I + T+N+++ L +
Sbjct: 157 KDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKL 216
Query: 73 SGAERVIEEMKRDGRVAADWTTFSNLASIYVE---AGLFEKAE----------------- 112
+ AE IE+MK G ++ + T++ L Y + AG KAE
Sbjct: 217 NKAEDAIEDMKAWG-ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVT 275
Query: 113 ------------------RALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSL 153
+A +E++ + ++ Y LI G L E +W + +
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335
Query: 154 RLAF-PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
L PN ++Y +I K + A K F + ++ N MI AY KEG
Sbjct: 336 GLGLKPNI--VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 393
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG-RGD 265
+E L G PN T+ R D++ A + L + + G +GD
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGD 447
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 36/237 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A + + + + L + + FN+++ Y K G E+ ++ M I+P+ TYN
Sbjct: 358 MMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYN 417
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L D+ A+ ++ EM+ G + D T++ L + AE+ L E+ N
Sbjct: 418 CLIAGLCRKQDLQAAKELLNEMENKG-LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y L+ Y G L + +
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM--------------------------- 509
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
EK + + TY NV+I Y K +LE A L +G +PN T++I
Sbjct: 510 -EK--ERKQPNVVTY-----NVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 558
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 16/154 (10%)
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
++ LV + E +KE ++ N+ I + G+L AE+ E + G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230
Query: 228 ADPNAKTWEIFSDYYLRNGD---MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 284
PN T+ D Y + G M A +++ + K P+ T T + F
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEML------ANKICPNEVTFNTLIDGFC 284
Query: 285 QEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
++++V A KKA +++ + +P I TY
Sbjct: 285 KDENVAAA-------KKAFEEMQKQGLKPNIVTY 311
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 133/298 (44%), Gaps = 16/298 (5%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +++++ Y + G +K+ +I+ MK + P+SY Y + L + ++ AE E
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M R G + D ++ L + + G A + E+ +R+ D+ Y +I+ + Q G
Sbjct: 342 MIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVT 200
++ E +++ + ++++ +I + A + ++GC+ ++
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTY 459
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
+I KEG L++A EL + G PN T+ + ++G+++ AV +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV----- 514
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
G + + T T M + + ++D A+ EILK+ + + +P I T+
Sbjct: 515 -GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ---EILKEMLG----KGLQPTIVTF 564
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL +M ++ L + +NS++ K+G+ E+ ++ E +A+ + D+ TY
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A ++ A+ +++EM G + TF+ L + + G+ E E+ L + +
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + + L+ Y NL I++ + +Y N+++ +++ A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E + + + +V+I + K + A E+ ++ RR G + + ++ FSD
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Query: 243 LRNGDMKLAVDCLEKAID 260
+ VD +++ I+
Sbjct: 712 YKGKRPDTIVDPIDEIIE 729
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 12/251 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E EA E +++ L ++ + +L+ + K G EM + I PD TY
Sbjct: 332 LAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + D+ A ++ EM G + D TF+ L + Y +AG + A R +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE----VYRIWR-SLRLAFPNTANISYLNMIQVLVNL 175
++ Y LI + G+L ++ +W+ L+ PN +Y +++ L
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ---PNI--FTYNSIVNGLCKS 504
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
++ A K E+E+ D ++ AY K G ++ A+E+ + +G P T+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 236 EIFSDYYLRNG 246
+ + + +G
Sbjct: 565 NVLMNGFCLHG 575
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 1/264 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +M ++ + + ++++ + + G + + EM + PDS T+ +
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A RV M + G + + T++ L + G + A L E+
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y ++ ++GN+ E ++ A N ++Y ++ ++ A++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
KE I NV++ + G LE+ E+L +G PNA T+ Y
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGK 268
++K A + G G GK
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGK 632
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/261 (18%), Positives = 101/261 (38%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A + + E+ + ++ +N ++ + G ++ ++ M+ PD +Y+
Sbjct: 227 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 286
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ++ ++IE MKR G + + + ++ + +AE A E+ +
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y LI + + G++ + + + ++Y +I + D+ A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K F E D +I Y K G +++A + + G PN T+ D
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ GD+ A + L + G
Sbjct: 466 LCKEGDLDSANELLHEMWKIG 486
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E E LL M + ++ FNSL+ Y + + AI ++M + + PD TY
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ ++ A + +EMK G + +T+S L +++ F +A ++
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKG-FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 121 RNAHRDLSAYQFL 133
D + F
Sbjct: 695 EGLAADKEIFDFF 707
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 117/262 (44%), Gaps = 5/262 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AEAL+++M E + + + +++ K G + ++++M S I D Y +
Sbjct: 28 EAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKADVVIYTAII 87
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L S A+ + EM G + + T++ + G + AE+ L+++ N
Sbjct: 88 DRLCKDGHHSKAQNLFTEMHDKG-IFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNV 146
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ + LI + + G +SE ++R + R FP+T I+Y ++I L A
Sbjct: 147 DPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDT--ITYNSLIDGFCKHSRLDDA 204
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F S + ++ N +IG + R+++ +L RRG P++ ++
Sbjct: 205 KHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHG 264
Query: 242 YLRNGDMKLAVDCLEKAIDTGR 263
+ + GD+ A D ++ I R
Sbjct: 265 FCQAGDLNAAQDLFQEMISQVR 286
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 110/276 (39%), Gaps = 7/276 (2%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ FN+LM + G + A++ M + P+ TY + + + D A ++ +
Sbjct: 11 VAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRK 70
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M + + AD ++ + + G KA+ E+ ++ ++ Y +I G
Sbjct: 71 MD-ESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYG 129
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
++ ++ R + + + +++ +I V + AE+ ++E D N
Sbjct: 130 KWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYN 189
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+I + K RL++A+ + + +G PN T R + + L + +
Sbjct: 190 SLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRR 249
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
G VP S + T + F Q D++ A+ +
Sbjct: 250 G------LVPDSVSYNTLIHGFCQAGDLNAAQDLFQ 279
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 139/342 (40%), Gaps = 44/342 (12%)
Query: 17 LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 76
+G S + N++M+ + K G + + M + ++ DS++YN+ + L + A
Sbjct: 267 VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEAL 326
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
++M++ G V D T++ LA ++ GL A + ++++ + + DL Y LI
Sbjct: 327 GFTDDMEKHG-VEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICG 385
Query: 137 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAEKCFKEWESGCATY 195
+ Q GN+ E ++ R L+ N+ + NM + L + + A F E E+
Sbjct: 386 HCQMGNIEEALKL-RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA----------------------- 232
D V +++I KEG ++ A +L E+ R + P+
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504
Query: 233 KTW------------EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
TW I D Y+R + A+ K I+ G PS T T +
Sbjct: 505 DTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERG------ITPSVVTFNTLI 558
Query: 281 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
F + D+ A LE+++ V + L+ Y G
Sbjct: 559 NGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVG 600
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 119/317 (37%), Gaps = 52/317 (16%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
S +N L+ G ++ +M+ + PD TYN + + +SGA +V++
Sbjct: 306 SFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQ 365
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKA----------------------------- 111
+M G + D T++ L + + G E+A
Sbjct: 366 KMLLQG-LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKV 424
Query: 112 ---ERALK---ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 163
E AL E+E D Y LI + G + Y+++ +RL FP+
Sbjct: 425 GRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH---- 480
Query: 164 SYLNMIQVLVNL---KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 220
+ VL+ L ++ A F W D+ + N+MI Y + + A +L
Sbjct: 481 -HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLY 539
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
+ RG P+ T+ + + R GD+ A K ++ R G VPS T T M
Sbjct: 540 YKMIERGITPSVVTFNTLINGFCRRGDLMEA----RKMLEVIRLKG--LVPSVVTYTTLM 593
Query: 281 RHFEQEKDVDGAEGFLE 297
+ + ++ FL
Sbjct: 594 NAYCEVGNMQEMFHFLH 610
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +LE ++ L S + + +LM Y + G+ +++ + EM+A++++P TY V +
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ L N + + +++E M G + D T++ + + + KA + + N
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKG-LLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNC 687
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y+ LI G+L +V R+ S+ +Y+ +I+ + A
Sbjct: 688 DPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALG 747
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F + + IR + +I K G + A+ G P+ + + + +
Sbjct: 748 YFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFH 807
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+ G+ + L + +G
Sbjct: 808 QQGNNSSVFEFLAMVVKSG 826
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/299 (16%), Positives = 114/299 (38%), Gaps = 7/299 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L KM E + S + FN+L+ + + G + +++ ++ ++P TY M
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V ++ + EM+ + V T++ L ++ + L+ + +
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANA-VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGL 652
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y +I + + +++ +++ + L + ++Y +I L DL ++
Sbjct: 653 LPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDR 712
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E T +I A+ +G++ A + +G + + + +
Sbjct: 713 MVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLC 772
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G + A + G P E +T + F Q+ + FL ++ K+
Sbjct: 773 KRGLITEAKYFFVMMLSEG------VTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKS 825
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 7/215 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL+ + + G + ++ +EMK + I P+ YTY++ + AL I+ A V EM
Sbjct: 255 YTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEM- 313
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
D + TF+NL +++ AG EK + +++ DL Y FLI + + NL
Sbjct: 314 LDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNL 373
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVT 200
E ++ S+ PN + S+ + + + +D+ GA + F E GC +
Sbjct: 374 GEAIKVLNSMAKNDCTPNAS--SFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTV-TY 430
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
N+++ +A + +LK+ +PN T+
Sbjct: 431 NILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTY 465
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 134/325 (41%), Gaps = 12/325 (3%)
Query: 18 GF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
GF S P+N ++ L K +I MKA ++ T+++ +R + A
Sbjct: 143 GFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEA 202
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
M+ G AD FSN+ SI + +A+ L+++ D+ Y L+
Sbjct: 203 VHAFNRMEDYG-CNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK-FEPDVIVYTSLVH 260
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCAT 194
+ + G++SE ++R +++A + +Y +I L + A F E ++GC
Sbjct: 261 GWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNP 320
Query: 195 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 254
+ N +I + + GR E ++ + +R + T+ + + ++ ++ A+
Sbjct: 321 NSVTFNN-LIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKV 379
Query: 255 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 314
L + D P++ + R + +DV+GA +K+ + L
Sbjct: 380 LN---SMAKND---CTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNIL 433
Query: 315 IRTYAAAGRTSPVMLRRLKMEKVEV 339
+R +A + + +M++ EV
Sbjct: 434 MRMFAVPKSADMIFKLKKEMDEEEV 458
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEK + +MK L + +N L+ + K + + ++ M + P++ ++N
Sbjct: 338 TEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNP 397
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
R +A D++GA R+ MK G + T++ L ++ + + KE++
Sbjct: 398 IFRCIAKSQDVNGAHRMFARMKEVG-CKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEE 456
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ + Y+ LI LY G+ + Y +R +
Sbjct: 457 EVEPNFNTYRELIALYCGMGHWNHAYMFFREM 488
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 134/329 (40%), Gaps = 20/329 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + +M L + +NS M K G ++ I M A P+ TY +
Sbjct: 203 EEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGIL 262
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + MK DG + A+ F+ L Y + G+ ++A L E++ +
Sbjct: 263 LHGYATEGCFADMMSFFNTMKGDG-IVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y LI+ + G L++ + + PNT + Y ++IQ DL
Sbjct: 322 LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT--VVYHSLIQGFCTHGDLVK 379
Query: 181 A-EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A E ++ +G +I N ++ + KEGR+ +A + + + G + +
Sbjct: 380 AKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLI 439
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR-HFEQEKDVDGAEGFLEI 298
D Y G+M A L+ I G G P + T T + +F+ + DG F E+
Sbjct: 440 DGYCLVGEMGKAFSVLDAMISAGIG------PDTFTYNTLVNGYFKSGRIDDGLNLFREM 493
Query: 299 LKKAVDDLGVE---VFEPLIRTYAAAGRT 324
K + V + + L R AGRT
Sbjct: 494 SDKKIKPTTVTYNIILDGLFR----AGRT 518
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 124/312 (39%), Gaps = 30/312 (9%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+++ + K G K + EM +PD T+N + AL + AE ++ +M
Sbjct: 119 YNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMV 178
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G V + T++++ Y G +E+A + +E+ R D+ ++ + + G
Sbjct: 179 DNG-VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRS 237
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG--AEKCFKEWESGCATY---- 195
E I+ S+ + PN L L G E CF + S T
Sbjct: 238 KEAAEIFYSMAAKGHRPNIVTYGIL-----------LHGYATEGCFADMMSFFNTMKGDG 286
Query: 196 ---DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
+ V ++I AYAK G ++ A + + +G P+ T+ R G + AV
Sbjct: 287 IVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAV 346
Query: 253 DCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD-VDGAEGFLEILKKAVDDLGVEVF 311
D + I TG P++ + ++ F D V E E++ + + F
Sbjct: 347 DKFNQMIGTG------VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFF 400
Query: 312 EPLIRTYAAAGR 323
++ + GR
Sbjct: 401 NSIVHSICKEGR 412
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 102/257 (39%), Gaps = 2/257 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+ MK + + + F L+ YAK G ++ I+ EM+ + PD +TY+ + AL
Sbjct: 277 SFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISAL 336
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR- 125
+ ++ A +M G V + + +L + G KA+ + E+ N R
Sbjct: 337 CRMGRLADAVDKFNQMIGTG-VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRP 395
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
+++ + ++ + G + + + I+ ++ + I + +I + ++ A
Sbjct: 396 NIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVL 455
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
S D N ++ Y K GR+++ L + P T+ I D R
Sbjct: 456 DAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRA 515
Query: 246 GDMKLAVDCLEKAIDTG 262
G A L + I G
Sbjct: 516 GRTVAAQKMLHEMIGCG 532
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 3/211 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+L+ Y G K +++ M ++ I PD++TYN + I + EM
Sbjct: 435 FNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMS 494
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
D ++ T++ + AG A++ L E+ L Y ++ +
Sbjct: 495 -DKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCT 553
Query: 144 SEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
E +++ L NI+ LN MI + ++ A+ F + +
Sbjct: 554 DEAIVMFQKL-CTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGI 612
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAK 233
MI KEG +E A+ + + G P ++
Sbjct: 613 MIRNLLKEGSVEEADNMFSSMEKSGCAPCSR 643
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 82/210 (39%), Gaps = 1/210 (0%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM-KRDGRVAADWTTFS 96
+ + +++ M +PD+++Y + ++ L N A ++ M K +G + D T++
Sbjct: 61 DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
+ + + G KA E+ + D+ + +I + + + R +
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180
Query: 157 FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
++Y +MI L A K F+E DI N + + K GR + A
Sbjct: 181 GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEA 240
Query: 217 EELKERARRRGADPNAKTWEIFSDYYLRNG 246
E+ +G PN T+ I Y G
Sbjct: 241 AEIFYSMAAKGHRPNIVTYGILLHGYATEG 270
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 83/193 (43%), Gaps = 6/193 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++L+ M +G + +N+L+ Y K+G + + +EM I P + TYN+ +
Sbjct: 450 KAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIIL 509
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L A++++ EM G + T++ + ++A ++L N
Sbjct: 510 DGLFRAGRTVAAQKMLHEMIGCGTTVS-LPTYNIILKGLCRNNCTDEAIVMFQKLCTMNV 568
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGA 181
+++ +I E ++ ++ + PN + +Y MI+ L+ + A
Sbjct: 569 KFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNAS--TYGIMIRNLLKEGSVEEA 626
Query: 182 EKCFKEWE-SGCA 193
+ F E SGCA
Sbjct: 627 DNMFSSMEKSGCA 639
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 3/240 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N++++ ++K + + M++ PD TYN+ + +L + + A V++E+
Sbjct: 134 YNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELL 193
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+DG T++ L + G +A EL +R DL Y +I + G
Sbjct: 194 KDG-CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGME 252
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNV 202
R L N +SY +++ +N E+ K+ SGC ++ ++
Sbjct: 253 DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEP-NVVTHSI 311
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+I ++ +EGR+ A + E + +G P++ +++ + + G + LA++ LEK + G
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 7/226 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+++ K G ++ ++ + A PD +YN+ +R+ + ER++++M
Sbjct: 239 YNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMV 298
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + T S L S + G +A L+ ++ + D +Y LI+ + + G L
Sbjct: 299 LSG-CEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRL 357
Query: 144 SEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVT 200
+ P+ N Y ++ L A F++ E GC +R
Sbjct: 358 DLAIEYLEKMVSDGCLPDIVN--YNTILATLCKFGCADLALDVFEKLDEVGCPP-TVRAY 414
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
N M A G A E+ R+G DP+ T+ R+G
Sbjct: 415 NTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDG 460
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 103/270 (38%), Gaps = 8/270 (2%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD ++ ++ A RV+E ++ G D +++ + S + +A + A +
Sbjct: 95 PDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGD--PDVYSYNAMISGFSKANQIDSANQ 152
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+ +R D+ Y +I G L + + L + I+Y +I+ +
Sbjct: 153 VFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATI 212
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+ A + F E S D+ N +I KEG + A + RG +P+
Sbjct: 213 LEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVV 272
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
++ I +L + ++ + +G P+ T + F +E V A
Sbjct: 273 SYNILLRSFLNKSRWEDGERLMKDMVLSG------CEPNVVTHSILISSFCREGRVREAV 326
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
LE++K+ ++PLI + GR
Sbjct: 327 NVLEVMKEKGLTPDSYSYDPLISAFCKEGR 356
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 149/375 (39%), Gaps = 47/375 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA L +M + ++ +N+L+ Y+ TG ++ + +EM+ SI+PD T ++
Sbjct: 284 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 343
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M +L I A V + M G+ +
Sbjct: 344 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 403
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
A D+ TF+ L Y G+ +KA E+ + D+ Y+ +I + G + +
Sbjct: 404 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 463
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ + +Y +IQ L A++ E + DI + +I
Sbjct: 464 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 523
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K GR+ +A+ + + G P+A + + D Y G M+ A+ + + G
Sbjct: 524 KLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------ 577
Query: 269 WVPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV 327
P+ T + + + +D G F E+L++ + + ++ +I AGRT P
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTI-LYSIIIDGLFQAGRTVPA 636
Query: 328 MLRRLKMEKVEVSEA 342
KM+ E++E+
Sbjct: 637 -----KMKFHEMTES 646
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 15/267 (5%)
Query: 4 KAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A+ LL M E S + +N+++ + K G K + +EM I PD TYN
Sbjct: 213 QADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 272
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + AE + +M + +W T++NL Y G +++A R KE+
Sbjct: 273 VVHALCKARAMDKAEAFLRQMVNKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRH 331
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------VLVNL 175
+ D+ L+ + G + E ++ ++ + N SY M+ LV++
Sbjct: 332 SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDM 391
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
DL F D NV+I AYA G L+ A + R G P+ T+
Sbjct: 392 TDL------FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 445
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTG 262
R G M A++ + ID G
Sbjct: 446 RTVIAALCRIGKMDDAMEKFNQMIDQG 472
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 117/284 (41%), Gaps = 18/284 (6%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA-DWTTFS 96
E + ++ +PD ++Y++ +++L A+ ++ M G V + + ++
Sbjct: 177 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 236
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--R 154
+ + + G KA KE+ R DL Y ++ + + + R + +
Sbjct: 237 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 296
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 214
PN N +Y N+I + A + FKE D+ ++++G+ K G+++
Sbjct: 297 RVLPN--NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 354
Query: 215 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 274
A ++ + +G +P+ ++ I + Y G + VD + D GDG P
Sbjct: 355 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL---VD-MTDLFDLMLGDG--IAPDFY 408
Query: 275 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
T ++ + +D A I+ + D GV +P + TY
Sbjct: 409 TFNVLIKAYANCGMLDKA----MIIFNEMRDHGV---KPDVVTY 445
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/246 (17%), Positives = 88/246 (35%), Gaps = 36/246 (14%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + +M++ + + + +++ + G + +M + PD Y YN
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A+ +I E+ +G + D FS++ + + G A+ N
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNG-MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 540
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H D Y L+ Y G + + R++ ++ A G
Sbjct: 541 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA-----------------------G 577
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E ++ V ++ Y K GR++ L +RG P+ + I D
Sbjct: 578 IEP------------NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 625
Query: 241 YYLRNG 246
+ G
Sbjct: 626 GLFQAG 631
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 3/230 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + + + L ++ ++ LM Y G EK + M ++ I P+ Y +
Sbjct: 531 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 590
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ I + EM + G + +S + +AG A+ E+
Sbjct: 591 GYCKIGRIDEGLSLFREMLQRG-IKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEK 183
D+ Y ++ + E +++ LR A NI LN MI + + + A+
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELR-AMNVKINIITLNTMIDGMFQTRRVEEAKD 708
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
F ++ ++MI KEG +E AE++ + G +PN++
Sbjct: 709 LFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 758
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 108/294 (36%), Gaps = 7/294 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ L+ ++ + + F+S++ K G I + PD+ Y++ M
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V + A RV + M G + + + L + Y + G ++ +E+ R
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAG-IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 613
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y +I Q G + + + +Y +++ L + A
Sbjct: 614 KPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 673
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
FKE + +I N MI + R+E A++L R PN T+ I +
Sbjct: 674 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLI 733
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G ++ A D + G P+S + +R ++ ++ A +L
Sbjct: 734 KEGLVEEAEDMFSSMQNAG------CEPNSRLLNHVVRELLKKNEIVRAGAYLS 781
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 125/295 (42%), Gaps = 11/295 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
++++K L ++ + +++ + A E+ + +MK +P+ + Y+ + A A
Sbjct: 239 FVQELKYNGLQMDTVIYGTILAVCASHNRCEEAESYFSQMKNEGHLPNVFHYSSLLNAYA 298
Query: 68 AVNDISGAERVIEEMKRDGRVAAD--WTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
+ + AE ++++MK G V WTT L +YV GLFEK+++ L ELE
Sbjct: 299 SSGNYKKAEELVQDMKSLGLVPNKVIWTT---LLKVYVRGGLFEKSQQLLLELETLGYAE 355
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D Y L+ + G + E + ++ + +Y MI + L A++
Sbjct: 356 DEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVKSDGYAYSIMISAYCRGRLLEEAKQLA 415
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
KE+E+ YD+ + N M+ AY + G +E+ + + P+ T+ I Y+ +
Sbjct: 416 KEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMRKMDELAISPSYCTFHILIKYFCKQ 475
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
LA +E G P E + H + K A +LK
Sbjct: 476 KLYLLAYQTMEDMHRKGHQ------PEEELCSMLIFHLGKAKAYTEAFSVYTMLK 524
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 56/300 (18%), Positives = 110/300 (36%), Gaps = 45/300 (15%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND-ISGAERVIEEMK 83
NS+++ ++G + + +MK + + PD+ TY+ + D S ++E+K
Sbjct: 185 NSVLSCLVRSGKFDISLKLFHKMKQNGLTPDTITYSTLLSGCIKAKDGYSKTLDFVQELK 244
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + D + + ++ E+AE +++N ++ Y L+ Y +GN
Sbjct: 245 YNG-LQMDTVIYGTILAVCASHNRCEEAESYFSQMKNEGHLPNVFHYSSLLNAYASSGNY 303
Query: 144 S---EVYRIWRSLRLAFPNTA---------------------------------NISYLN 167
E+ + +SL L PN + Y
Sbjct: 304 KKAEELVQDMKSLGLV-PNKVIWTTLLKVYVRGGLFEKSQQLLLELETLGYAEDEMPYCL 362
Query: 168 MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
++ L + A F E + D ++MI AY + LE A++L + +
Sbjct: 363 LMDGLSKAGRVDEARSFFDEMKEKNVKSDGYAYSIMISAYCRGRLLEEAKQLAKEFEAKY 422
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
+ Y R GDM+ + + K D PS T +++F ++K
Sbjct: 423 DKYDVVILNTMLCAYCRAGDMESVMQTMRKM------DELAISPSYCTFHILIKYFCKQK 476
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A A+ ++M L +G +N+ + K G+ E ++ +M+A + P+ TY+
Sbjct: 69 EDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTL 128
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A ++ E+MK R+ D ++ L +IYV+AG + + E+E
Sbjct: 129 IDGYSKLEKYEEALKLCEKMK-SMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELG 187
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+D Y LI YG+ G L V + + +R + ++Y +I + A
Sbjct: 188 IEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAF 247
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +++ D+ + + I AK G +E A L G PN T+ D +
Sbjct: 248 NVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAF 307
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 97/226 (42%), Gaps = 42/226 (18%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FNSL+ ++ GH E A+ EM I D YTYN ++ A+ ++ A +V+ +M+
Sbjct: 55 FNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDME 114
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR---DLSAYQFLITLYGQT 140
G V + T+S L Y + EK E ALK E + R D Y L+ +Y +
Sbjct: 115 AKG-VKPNVVTYSTLIDGYSK---LEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKA 170
Query: 141 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
G +E+ AN V +++L G EK D
Sbjct: 171 GKYAEI--------------AN--------VCDEMEEL-GIEK------------DTVTY 195
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
N +I Y K+GRL+ L + R+RG P+ T+ D Y + G
Sbjct: 196 NSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAG 241
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/211 (18%), Positives = 81/211 (38%), Gaps = 2/211 (0%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEMKRDGRVAADWTTFSNLAS 100
+++ MK + + P + +YN + A D+ +M +DG + D TF++L +
Sbjct: 2 GVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDG-LCPDRKTFNSLLA 60
Query: 101 IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNT 160
G E A E+ + RD+ Y I + GN+ ++ +
Sbjct: 61 ACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKP 120
Query: 161 ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 220
++Y +I L+ A K ++ +S D N ++ Y K G+ +
Sbjct: 121 NVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVC 180
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
+ G + + T+ + Y + G + +
Sbjct: 181 DEMEELGIEKDTVTYNSLINGYGKQGRLDIV 211
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E +L ++M L +++ +N L++ + G + A++ EM + ++PD +TY++
Sbjct: 248 EAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL 307
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L+ D + + ++G D+T S L + + G AE L+ L N
Sbjct: 308 FDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTC-SILLNGLCKDGKVSIAEEVLQSLVNAG 366
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
Y LI Y QTG L + + ++ +I+Y +I L + + A+
Sbjct: 367 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 426
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
E + + N +I AY + G+LE + + G PN ++ + +
Sbjct: 427 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAF 486
Query: 243 LRNGDMKLAVDCLE 256
+NG + AV L+
Sbjct: 487 CKNGKIPEAVAILD 500
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +L +M+E L + + + S++ + K G + AI+ +M ++P++ YN
Sbjct: 458 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 517
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A ++E+MK +G ++ T++ L +AE + L N
Sbjct: 518 IDAYVEHGPNDQAFILVEKMKSNG-ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 576
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D +Y LI+ GN+ + + + + + +Y +I L L E
Sbjct: 577 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEME 636
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERARRR 226
+++ + N+M+ AY+K G AE+L KE ++R
Sbjct: 637 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 105/248 (42%), Gaps = 9/248 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
A+ LL +M++ + + FN+L+ Y +TG EK ++ EM+ + + P+ +Y +
Sbjct: 424 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 483
Query: 64 RALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
A I A ++++M +D V + ++ + YVE G ++A ++++++
Sbjct: 484 NAFCKNGKIPEAVAILDDMFHKD--VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 541
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANISYLNMIQVLVNLKDLP 179
+ Y LI +SE I SL RL P+ +SY +I ++
Sbjct: 542 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL-IPDA--VSYNTLISACCYRGNID 598
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + +R + +I GRL E L ++ + P+ I
Sbjct: 599 KALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMV 658
Query: 240 DYYLRNGD 247
+ Y + G+
Sbjct: 659 EAYSKYGN 666
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 128/323 (39%), Gaps = 42/323 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ L E+MK + S + +NSL+ + G E+ ++ EM + PD T+NV
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A++++ M G + D T+++L + G A + ++
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESG-IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 350
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------------ 170
D+ +Y LI Y +T + E +++ + L I+Y ++++
Sbjct: 351 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 410
Query: 171 VLVNLKDLPG-----------------------AEKCFKEWESGCATYDIRVTNVMIGAY 207
L ++ G A K F E +S +I N +I
Sbjct: 411 KLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 470
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
K G+LE A EL E+ G +PN T+ I + R G + A ++K G
Sbjct: 471 CKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG----- 525
Query: 268 KWVPSSETIRTFMRHFEQEKDVD 290
P T T MR F + ++
Sbjct: 526 -CTPDIITYNTLMRGFYESNKLE 547
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 11/232 (4%)
Query: 19 FSSMP----------FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
F SMP +N L+ Y+KT E+ + EM P+ TY+ ++ +
Sbjct: 343 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 402
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+ A+++ MK G +T L + LFE A + EL++ N ++
Sbjct: 403 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFE-AMKLFTELKSSNFKLEIE 461
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI + G L + ++ L ++Y MI + A ++
Sbjct: 462 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 521
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E+ T DI N ++ + + +LE +L R ++ P+A T I D
Sbjct: 522 EANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 573
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 122/303 (40%), Gaps = 15/303 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN L++ AK H ++ ++ +M+ S + D T N+ + L VN + +
Sbjct: 72 FNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGIL 131
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R G + + T++ L +A R ++ D+ Y LI TGN+
Sbjct: 132 RRGY-SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNI 190
Query: 144 SEVYRIWRSL-----RLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDI 197
+ ++ + + R N I+Y ++ L + A++ F+E ++ I
Sbjct: 191 NIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSI 250
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
N +I + G+ E ++ L + +G P+ T+ + D + G + A L
Sbjct: 251 ISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV 310
Query: 258 AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLEILKKAVDDLGVEVFEPLIR 316
I++G VP T + + F D++ A E F+ + K + V + LI
Sbjct: 311 MIESG------IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEP-DVISYNVLIN 363
Query: 317 TYA 319
Y+
Sbjct: 364 GYS 366
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 112/255 (43%), Gaps = 1/255 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A L E+M + + +++ + SL+ + K G E I +EM PD N
Sbjct: 493 VDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNA 552
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+M + + + EE+K G + D ++S L V+AG + ++ +
Sbjct: 553 YMDCVFKAGETGKGRALFEEIKSRGFIP-DVMSYSILIHGLVKAGFARETYELFYAMKEQ 611
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D AY I + ++G +++ Y++ ++ ++Y ++I L + L A
Sbjct: 612 GCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEA 671
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E +S ++ + + +I + K GR++ A + E ++G PN TW D
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 731
Query: 242 YLRNGDMKLAVDCLE 256
++ ++ A+ C +
Sbjct: 732 LVKAEEINEALVCFQ 746
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 16/320 (5%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +M+EL S F +++ ++A+ G + +++ EMK++ + D YNV +
Sbjct: 220 LFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFG 279
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-NRNAHRD 126
+ A + E+K G + D T++++ + + ++A +++E NRN
Sbjct: 280 KAGKVDMAWKFFHEIKSHGLLPDD-VTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338
Query: 127 LSAYQFLITLYGQTGNLSEVYRIW--RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
AY +I YG G E Y + + R P+ I+Y ++ L L A +
Sbjct: 339 Y-AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSV--IAYNCILTCLGKKGRLGEALRT 395
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F+E + A ++ NV+I K G +E A ++++ + G PN T I D +
Sbjct: 396 FEEMKKDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCK 454
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWV-PSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
L++A G K P T + + ++ VD A E + +
Sbjct: 455 AKK-------LDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSD 507
Query: 304 DDLGVEVFEPLIRTYAAAGR 323
V+ LI+++ GR
Sbjct: 508 KIPNAVVYTSLIKSFFKCGR 527
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 132/302 (43%), Gaps = 9/302 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A +LL++MK L + +N + + K G + E+K+ ++PD TY
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L N + A + E+M+++ V + ++ + Y AG F++A L+ + R
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAY-AYNTMIMGYGSAGKFDEAYSLLERQKARG 368
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTANISYLNMIQVLVNLKDLPGA 181
+ AY ++T G+ G L E R + ++ A PN + +Y +I +L ++ A
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLS--TYNVLIDMLCKAGEVEAA 426
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K + ++ N+MI K +L+ A + E + P+ T+ D
Sbjct: 427 FKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDG 486
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ G + A E+ +D+ + V + I++F + +E DG + F E++ +
Sbjct: 487 LGKQGRVDDAYRLYEQMLDSDKIPNA--VVYTSLIKSFFKCGRKE---DGHKIFKEMIHR 541
Query: 302 AV 303
Sbjct: 542 GC 543
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 116/275 (42%), Gaps = 9/275 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T K AL E++K M ++ L+ K G + + MK + D++ YN
Sbjct: 563 TGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNT 622
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ ++ A +++EEMK GR T+ ++ + ++A +E ++
Sbjct: 623 FIDGFCKSGKVNKAYQLLEEMKTKGR-QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPG 180
++ Y LI +G+ G + E Y I L + T N+ N ++ LV +++
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL-MQKGLTPNVYTWNCLLDALVKAEEINE 740
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A CF+ ++ T + +++I + + A + +++G PN T+
Sbjct: 741 ALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIA 800
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 275
+ G++ A E+ + +GG VP S +
Sbjct: 801 GLAKAGNIAEASSLFERF----KANGG--VPDSAS 829
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 12/239 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E+ K L + + ++SL+ + K G ++ I++E+ + P+ YT+N
Sbjct: 669 DEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 728
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL +I+ A + MK + + + T+S L + F KA +E++ +
Sbjct: 729 LDALVKAEEINEALVCFQNMK-NLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQG 787
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG 180
+ Y +I + GN++E ++ + P++A SY +I+ L +
Sbjct: 788 LKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSA--SYNAIIEGLSYSRRAME 845
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA----EELKERARRRGADPNAKTW 235
A K F+E + ++ A K+ LE A L+E A+ + A A++W
Sbjct: 846 AYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKSQHA---ARSW 901
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 15/267 (5%)
Query: 4 KAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A+ LL M E S + +++++ + K G K + +EM I PD TY+
Sbjct: 200 QADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSS 259
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + AE + +M G + +WT ++NL Y G +++A R KE+
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWT-YNNLIYGYSSTGQWKEAVRVFKEMRRH 318
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------VLVNL 175
+ D+ L+ + G + E ++ ++ + N SY M+ LV++
Sbjct: 319 SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDM 378
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
DL F DI NV+I AYA G L+ A + R G P+ T+
Sbjct: 379 TDL------FDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTG 262
R G M A++ + ID G
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQG 459
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 139/359 (38%), Gaps = 42/359 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA L +M + ++ +N+L+ Y+ TG ++ + +EM+ SI+PD T ++
Sbjct: 271 DKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 330
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M +L I A V + M G+ +
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 390
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
A D TF+ L Y G+ +KA E+ + D+ Y+ +I + G + +
Sbjct: 391 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ + +Y +IQ L A++ E + DI + +I
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K GR+ +A+ + + G P A + + D Y G M+ A+ + + G
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------ 564
Query: 269 WVPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSP 326
P+ T + + + +D G F E+L+K + + ++ +I AGRT P
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI-LYNIIIDGLFEAGRTVP 622
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 36/231 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA + + M + + + + +L+ Y K G ++ ++ +EM I P + YN+
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ EM G +A + T++ + + F++A KEL N
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESG-IAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMN 669
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ +I QT + E ++ A+IS ++ +V
Sbjct: 670 VKINIITLNTMIAGMFQTRRVEEAKDLF----------ASISRSGLVPCVV--------- 710
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
TY I +TN++ KEG +E AE++ + G +P+++
Sbjct: 711 -----------TYSIMITNLI-----KEGLVEEAEDMFSSMQNAGCEPDSR 745
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/237 (16%), Positives = 88/237 (37%), Gaps = 1/237 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + +M++ + + + +++ + G + +M + PD Y Y+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A+ +I E+ +G + D FS++ + + G A+ N
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNG-MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H Y L+ Y G + + R++ ++ A ++ Y ++ + +
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
F+E + N++I + GR A+ G N T+ I
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNI 644
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 52/294 (17%), Positives = 106/294 (36%), Gaps = 7/294 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ L+ ++ + + F+S++ K G I + P + Y++ M
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V + A RV + M G + + + L + Y + G ++ +E+ +
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAG-IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y +I + G + + + +Y +++ L + A
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIF 660
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
FKE + +I N MI + R+E A++L R G P T+ I +
Sbjct: 661 LFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLI 720
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G ++ A D + G P S + +R ++ ++ A +L
Sbjct: 721 KEGLVEEAEDMFSSMQNAG------CEPDSRLLNHVVRELLKKNEIVRAGAYLS 768
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 124/288 (43%), Gaps = 11/288 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ALL +M LN+ + + FN L+ + K G +++ M + PD TYN
Sbjct: 167 KEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSL 226
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M + ++ A ++ + M G D ++S L + Y +A ++A++ E+ ++
Sbjct: 227 MYGYSMWTEVVEARKLFDVMITKG-CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPG 180
+ + +Y LI Q G L E +++++ PN +Y ++ L
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNL--YTYAILLDGFCKQGYLGK 343
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F+ +S ++ + N+++ A K G L++A EL G PN + + +
Sbjct: 344 AFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIIN 403
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+ G + A++ D G P + +R F Q KD
Sbjct: 404 GLCKEGLLDEALEAFRNMEDDG------CPPDEFSYNVIIRGFLQHKD 445
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 101/242 (41%), Gaps = 1/242 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ MK ++ + + SL+ ++ A++ EM + +IMP+ T+NV +
Sbjct: 137 IFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFC 196
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ AE V++ M G V D T+++L Y +A + + + D+
Sbjct: 197 KEGKVLAAEGVLKTMTEMG-VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDV 255
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+Y LI Y + + E +++ + N+SY +I L L L A+ FK
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN 315
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ ++ +++ + K+G L A L + PN + I + ++G+
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375
Query: 248 MK 249
+K
Sbjct: 376 LK 377
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 97/245 (39%), Gaps = 1/245 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A L +KM+E + + +++L+ K + I MKA I P +TY
Sbjct: 96 TALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTS 155
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ L + A ++ EM + + TF+ L + + G AE LK +
Sbjct: 156 LIQGLCNFSRWKEASALLNEMTSL-NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEM 214
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y L+ Y + E +++ + SY +I K + A
Sbjct: 215 GVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEA 274
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ F E +T + N +I + GRL A++L + G PN T+ I D
Sbjct: 275 KQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDG 334
Query: 242 YLRNG 246
+ + G
Sbjct: 335 FCKQG 339
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 88/229 (38%), Gaps = 36/229 (15%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
++L K +L L + + F +L+ K G + + +M A PD YTY + L
Sbjct: 31 SVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGL 90
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ + + A AGLF+K E A +L +
Sbjct: 91 CKIGETALA-----------------------------AGLFKKMEEAGCQL-------N 114
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y LI + ++E I+ ++ + +Y ++IQ L N A
Sbjct: 115 VVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN 174
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
E S ++ NV++ + KEG++ AE + + G +P+ T+
Sbjct: 175 EMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTY 223
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A ++L KM +L S + F SL+ + +++ M S P+ YN +
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L +++ A ++ EM++ G + AD T++ L + +G + A R L+++ R+ +
Sbjct: 185 GLCKNGELNIALELLNEMEKKG-LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ + LI ++ + GNL E +++ + + + N++Y ++I L L A+K
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F S ++ N +I + K ++ +L +R G + + T+ Y +
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 245 NGDMKLAVD 253
G +++A+D
Sbjct: 364 VGKLRVALD 372
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 5/244 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +L M + ++ + F +L+ ++ K G+ ++ + +EM SS+ P++ TYN +
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + A++ + M G + T++ L S + + + ++ + + + +
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKG-CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y LI Y Q G L I W R P+ I++ ++ L ++ A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI--ITHCILLHGLCVNGEIESAL 406
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F + I N+MI K ++E A EL R G P+A+T+ I
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 243 LRNG 246
+NG
Sbjct: 467 CKNG 470
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 42/279 (15%)
Query: 13 KELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
K + LGF S + SL+ + + ++ +++ M +P+ YN + L
Sbjct: 664 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 723
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
D++ A V M++ G + AD T++ L S +G + A R L+++ R ++ +
Sbjct: 724 DLNNALEVFYCMEKKG-IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 782
Query: 131 QFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
LI + + GNL E +++ + R PN +Y ++I L A+ F
Sbjct: 783 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNV--FTYNSLINGFCIHGCLGDAKYMFDLM 840
Query: 189 ES-GC----ATYDIRVT------------------------------NVMIGAYAKEGRL 213
S GC TY+ +T N +I Y + G+L
Sbjct: 841 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
A+++ R G P+ T+ I D NG ++ A+
Sbjct: 901 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 939
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +N+L+T + K+ E + EM ++ D++TYN + ++ A++V
Sbjct: 850 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 909
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M D V+ D T++ L G EKA +++L+ D+ Y +I +T
Sbjct: 910 MV-DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 968
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
L E + ++RSL I+Y+ MI L
Sbjct: 969 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1000
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 97/231 (41%), Gaps = 1/231 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL M + + + + F +L+ + K G+ + + +EM S++P+ +TYN +
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A+ + + M G D T++ L + + ++ E + E+ +
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKG-CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 881
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y LI Y Q G L+ +++ + + ++Y ++ L N + A
Sbjct: 882 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 941
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
++ + DI N++I + +L+ A L R+G P+A +
Sbjct: 942 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 992
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 38/286 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A AL +M S + F L+T A E + Q+M+ I D Y++ +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 63 MRALAAVNDISGAERVIEEMKRDG-------------------RVAADWT---------- 93
+ + +S A V+ +M + G R+ ++
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 94 -----TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
++ L + G A L E+E + D+ Y L+T +G S+ R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ R + N +++ +I V V +L A++ +KE + N +I
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEI----FSDYYLRNGDMKL 250
GRL +A++ + +G PN T+ F + + + MKL
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A ++L KM +L S + F SL+ + +++ M S P+ YN +
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L +++ A ++ EM++ G + AD T++ L + +G + A R L+++ R+ +
Sbjct: 185 GLCKNGELNIALELLNEMEKKG-LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ + LI ++ + GNL E +++ + + + N++Y ++I L L A+K
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F S ++ N +I + K ++ +L +R G + + T+ Y +
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 245 NGDMKLAVD 253
G +++A+D
Sbjct: 364 VGKLRVALD 372
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 5/244 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +L M + ++ + F +L+ ++ K G+ ++ + +EM SS+ P++ TYN +
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + A++ + M G + T++ L S + + + ++ + + + +
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKG-CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y LI Y Q G L I W R P+ I++ ++ L ++ A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI--ITHCILLHGLCVNGEIESAL 406
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F + I N+MI K ++E A EL R G P+A+T+ I
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 243 LRNG 246
+NG
Sbjct: 467 CKNG 470
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 38/286 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A AL +M S + F L+T A E + Q+M+ I D Y++ +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 63 MRALAAVNDISGAERVIEEMKRDG-------------------RVAADWT---------- 93
+ + +S A V+ +M + G R+ ++
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 94 -----TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
++ L + G A L E+E + D+ Y L+T +G S+ R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ R + N +++ +I V V +L A++ +KE + N +I
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEI----FSDYYLRNGDMKL 250
GRL +A++ + +G PN T+ F + + + MKL
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 152/352 (43%), Gaps = 10/352 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A + + KMKE + S + ++ L++ +AKTG+ E QE K ++ Y
Sbjct: 363 EEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNI 422
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ AE ++ EM+ +G + A + + Y G +K + +
Sbjct: 423 IYAYCQRCNMDKAEALVREMEEEG-IDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECG 481
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + Y LI LY + G +S+ + + + A +Y +I + LKD A
Sbjct: 482 LNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAF 541
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F++ D+ + N +I A+ G+++ A + +++ P +T+ +
Sbjct: 542 AIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGF 601
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R G+MK A+D D R G +P+ T + +++ ++ AE L+ + A
Sbjct: 602 ARKGEMKKALD----VFDMMRMSG--CIPTVHTYNALILGLVEKRKMEKAEQILDEMTLA 655
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVM--LRRLKMEKVEVSEAS-KKLLEAIC 351
+ ++ YA+ G T +L+ E +++ + + LL+A C
Sbjct: 656 GVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACC 707
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 144/354 (40%), Gaps = 42/354 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K + E+ KE L S + + L+ LYAK G K + +EM+ + I + TY++
Sbjct: 468 DKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSML 527
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + D + A + E++ +DG + D ++N+ + + G ++A +KE++ +
Sbjct: 528 INGFLKLKDWANAFAIFEDLIKDG-IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQR 586
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ +I + + G + + ++ +R++ +Y +I LV + + AE
Sbjct: 587 HKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAE 646
Query: 183 KCFKEW-----------------------ESGCA-TY-----------DIRVTNVMIGAY 207
+ E ++G A TY D+ ++ A
Sbjct: 647 QILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKAC 706
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
K GR+++A + + + N + I D + R GD+ A D +++ G
Sbjct: 707 CKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQ--- 763
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
P T +F+ + D+ A +E +K V+ + LI +A A
Sbjct: 764 ---PDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARA 814
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 106/255 (41%), Gaps = 1/255 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +++M++ ++ F ++ +A+ G +K + M+ S +P +TYN
Sbjct: 573 DRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNAL 632
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + AE++++EM G V+ + T++ + Y G KA +L +
Sbjct: 633 ILGLVEKRKMEKAEQILDEMTLAG-VSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEG 691
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y+ L+ ++G + + + + Y +I D+ A
Sbjct: 692 LQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAA 751
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
++ + DI I A +K G ++ A + E + G PN KT+ + +
Sbjct: 752 DLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGW 811
Query: 243 LRNGDMKLAVDCLEK 257
R + A+ C E+
Sbjct: 812 ARASLPEKALSCFEE 826
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 117/299 (39%), Gaps = 7/299 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ ++ Y + G + ++M+A I P S+ Y + A A D+ A + +MK
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + T+S L S + + G E A+ +E + +++ + Y +I Y Q N+
Sbjct: 374 EEG-IEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNM 432
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + R + + Y M+ + D F+ ++ + +
Sbjct: 433 DKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCL 492
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I YAK G++ A E+ + G N KT+ + + +L+ D A E I
Sbjct: 493 INLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIK--- 549
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
DG K P + F +D A ++ ++K F P+I +A G
Sbjct: 550 -DGIK--PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKG 605
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A+ ++M N+ ++ +N L+ +A+ G + ++Q+MK + PD +TY +
Sbjct: 713 QSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSF 772
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + D+ A + IEEMK G V + T++ L + + A L EKA +E++
Sbjct: 773 INACSKAGDMQRATKTIEEMKSVG-VKPNVKTYTTLINGWARASLPEKALSCFEEMKLSG 831
Query: 123 AHRDLSAYQFLIT 135
D + Y L+T
Sbjct: 832 LKPDRAVYHCLMT 844
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KA K+++ L + +L+ K+G + A+ +EM A +I +++ YN+
Sbjct: 677 TGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNI 736
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A DI A ++++MKR+G V D T+++ + +AG ++A + ++E+++
Sbjct: 737 LIDGWARRGDIWEAADLMQQMKREG-VQPDIHTYTSFINACSKAGDMQRATKTIEEMKSV 795
Query: 122 NAHRDLSAYQFLI 134
++ Y LI
Sbjct: 796 GVKPNVKTYTTLI 808
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 109/297 (36%), Gaps = 7/297 (2%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
P Y + + D+ A E+M+ G + ++NL Y E+A
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARG-IEPSSHVYTNLIHAYAVGRDMEEALS 367
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+++++ L Y L++ + +TGN ++ + + I Y N+I
Sbjct: 368 CVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYC 427
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
++ AE +E E I + + M+ Y G + + ER + G +P+
Sbjct: 428 QRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVI 487
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ + Y + G + A++ ++ G K T + F + KD A
Sbjct: 488 TYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMK------TYSMLINGFLKLKDWANAF 541
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
E L K V ++ +I + G+ + +M+K ++ + I
Sbjct: 542 AIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPII 598
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F+ ++ +Y K+G + + +M I + T+N M ++S + ++M+
Sbjct: 252 FHMMIYMYKKSGDYAQARKLFAQMSERGIPQSTVTFNSLMSFEGDYKEVSS---IYDQMQ 308
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R G + D ++S L Y +A E+A +E+ + +Y L+ + +G +
Sbjct: 309 RAG-LKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLV 367
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +++++R SY M+ VN D+ GAEK F+ + ++ V +
Sbjct: 368 EEAQTVFKTMRRHRVEPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTL 427
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
+ Y+K +E + ER R +G +PN + D + RN D AV
Sbjct: 428 MKGYSKLDNVEKVMRVYERMRMQGVEPNQTIFTTIMDVHGRNSDFGNAV 476
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
++ ++M+ L + ++ L+ Y K E+ A+ +EM + I P +YN+ + A
Sbjct: 302 SIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAF 361
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A + A+ V + M+R RV D +++ + YV A + AE+ + ++ +
Sbjct: 362 AISGLVEEAQTVFKTMRRH-RVEPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPN 420
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y L+ Y + N+ +V R++ +R+ + ++ V D A F
Sbjct: 421 VVVYGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQTIFTTIMDVHGRNSDFGNAVIWFN 480
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E E+ D + N+++ + A EL
Sbjct: 481 EMETRGYPPDKKAKNILLSLAKTPEEQQEANEL 513
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 29/335 (8%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
FS M F L+T Y K G + +++ M P + M A AE V
Sbjct: 139 FSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALMEAYGRAKQYRKAEAV 198
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHR-DLSAYQFLIT 135
M+ G + T L S+ VE +++AE ++L E R + D + +I
Sbjct: 199 FHRMQTSGPEPSPITYQIILKSL-VEGDKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMIY 257
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES----- 190
+Y ++G+ ++ +++ A +S + Q V L E +KE S
Sbjct: 258 MYKKSGDYAQARKLF----------AQMSERGIPQSTVTFNSLMSFEGDYKEVSSIYDQM 307
Query: 191 --GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
D+ +++I AY K R E A + E G P K++ I D + +G
Sbjct: 308 QRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISG-- 365
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 308
V+ + T R + P + T + + D+DGAE F +K+ V
Sbjct: 366 --LVEEAQTVFKTMRRH--RVEPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNV 421
Query: 309 EVFEPLIRTYAAAGRTSPVM--LRRLKMEKVEVSE 341
V+ L++ Y+ VM R++M+ VE ++
Sbjct: 422 VVYGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQ 456
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA L+EKM+E +L S+ ++ ++ + G ++ + EMK I P S +N
Sbjct: 201 LYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKEALSWFAEMKRLEIKPASSNFN 260
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ D+ G RVI EMK+ G DW T Y AGL + L L +
Sbjct: 261 TLISLYGKAKDVEGIVRVITEMKKYG-CKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRD 319
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y L+ +Y + E RI+ ++R A ++I + + G
Sbjct: 320 AGWVEETGSYGTLLHVYLKCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDG 379
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A+ FKE + T + + MI Y G ++ AE L R + + + +
Sbjct: 380 AKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAEGLFHSLRSSVKRLDIFAYNVMIN 439
Query: 241 YYLR 244
Y+R
Sbjct: 440 VYMR 443
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 136/327 (41%), Gaps = 20/327 (6%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++AE L ++ +N ++ +Y + PE + + M+ ++PD+YTY+
Sbjct: 412 VKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKVYKLMEEDHLLPDAYTYHS 471
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R N + AE + + R+ V D + + + + E+ + +E+ +
Sbjct: 472 MLRMCQKCNLPAQAEEIYWRL-RNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDV 530
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLP 179
+ +I LYG+ G + E R ++L+LA F + IS+ ++ +D P
Sbjct: 531 GYVPYNITFNVMIDLYGKAG-MPE--RAHKALKLAQQFGSADKISFSTLVHAYAKKQDFP 587
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
E E ++ + N ++ AY K G++E ++ R G + ++ I
Sbjct: 588 NMEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILI 647
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ Y +N + +E T + +G VP T T +R + D A +
Sbjct: 648 NTYGKN----YMIAEMETLFRTMQEEG--VVPDRWTYNTIIRTYGFADYPDRAVYWF--- 698
Query: 300 KKAVDDLGVE----VFEPLIRTYAAAG 322
KA+ D G+ + L+ T+ AG
Sbjct: 699 -KAMQDAGISPDRVTYMILVSTFERAG 724
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 117/319 (36%), Gaps = 47/319 (14%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
KM+E FN+L+ +K + + Q M + ++P TY++ +
Sbjct: 37 KMQEDECEPDQYTFNTLIMSASKANYVDYATITFQLMLQTGVLPSILTYSMMLLLYQRHR 96
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
++ AE V M G A +S + ++Y GLFEK+E+ + E+ N D +
Sbjct: 97 KVAEAESVFSHMLNSGVQAV--VAYSVMIALYNREGLFEKSEQIVTEMRRNNVTPDRDNW 154
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
+ YGQ G + E RI ++ + + + Y
Sbjct: 155 LKQLNTYGQQGKIEEAERIMDTVEESGMSLGLVGY------------------------- 189
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
N MI AY K + A L E+ R P++ T+ R G +K
Sbjct: 190 ----------NSMITAYGKACLYDKAARLVEKMREEDLVPDSITYSCMIGACGRVGKLKE 239
Query: 251 AVDCLE--KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGV 308
A+ K ++ P+S T + + + KDV+G + +KK
Sbjct: 240 ALSWFAEMKRLEIK--------PASSNFNTLISLYGKAKDVEGIVRVITEMKKYGCKPDW 291
Query: 309 EVFEPLIRTYAAAGRTSPV 327
+ + +R Y AG V
Sbjct: 292 QTLDAAVRAYDRAGLIKDV 310
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 157/418 (37%), Gaps = 82/418 (19%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A + +MK L + +S FN+L++LY K E I +I EMK PD T +
Sbjct: 238 KEALSWFAEMKRLEIKPASSNFNTLISLYGKAKDVEGIVRVITEMKKYGCKPDWQTLDAA 297
Query: 63 MRAL---AAVNDISG--------------------------------AERVIEEMKRDGR 87
+RA + D++ A R+ M++ G
Sbjct: 298 VRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYLKCNLPKEALRIFLAMRKAGM 357
Query: 88 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
++ S L + +A +F+ A+ KE++ L + +I +YG G++ E
Sbjct: 358 APKEYMCRS-LICTFRDAEMFDGAKSVFKEMQVAGVTPSLESSCTMIYVYGMNGDVKEAE 416
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAEKCFKEWE-----SGCATY------ 195
++ SLR + +Y MI V + D+P GA K +K E TY
Sbjct: 417 GLFHSLRSSVKRLDIFAYNVMINVYMRC-DMPEGAIKVYKLMEEDHLLPDAYTYHSMLRM 475
Query: 196 ------------------------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
D + N ++ AK LE +L + G P
Sbjct: 476 CQKCNLPAQAEEIYWRLRNSDVELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPY 535
Query: 232 AKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDG 291
T+ + D Y + G + A L+ A G D + T + + +++D
Sbjct: 536 NITFNVMIDLYGKAGMPERAHKALKLAQQFGSAD-------KISFSTLVHAYAKKQDFPN 588
Query: 292 AEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
E L ++ A +E + ++ Y AG+ V +L R++ + + AS +L
Sbjct: 589 MEAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNIL 646
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
EA L +M+ G S +NS++ Y K G EK+ ++ M+ S + D +YN+ +
Sbjct: 590 EAALWEMQNAGYGSSLEAYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLASYNILINT 649
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
I+ E + M+ +G V W T++ + Y A ++A K +++
Sbjct: 650 YGKNYMIAEMETLFRTMQEEGVVPDRW-TYNTIIRTYGFADYPDRAVYWFKAMQDAGISP 708
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLA 156
D Y L++ + + GN+ E R W LR++
Sbjct: 709 DRVTYMILVSTFERAGNIDEAAR-W-CLRMS 737
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNV 61
++AEAL+ +MKE + +N+L+ Y G PE+ ++QEM K + P+ T+N+
Sbjct: 77 KEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNM 136
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++A A + A VI M+ G V D +++ LA ++ + G AE + E++N
Sbjct: 137 LIKAWAHDKNPEKARNVISMMRAAG-VGPDVVSYNTLAQLFAKLGKPWDAENVITEMQNV 195
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y +I Y G + E R+ +++ + + ++++
Sbjct: 196 YLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKV 255
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+K FK E+ D++ +++ A+ G ++ A+ + R + P+ + I
Sbjct: 256 DKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKG 315
Query: 242 YLRNG 246
Y R G
Sbjct: 316 YSRQG 320
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 144/334 (43%), Gaps = 19/334 (5%)
Query: 3 EKAEALLEKM-KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A LL++M K++N + FN L+ +A +PEK +I M+A+ + PD +YN
Sbjct: 112 EEAMKLLQEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNT 171
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + AE VI EM+ + + + T+ + + Y+ AG +++ R ++ ++
Sbjct: 172 LAQLFAKLGKPWDAENVITEMQ-NVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMD 230
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ + L+ Y ++ +V ++++ L F ++ +I L
Sbjct: 231 GISPTIAVFNHLVKGYSESMKPHKVDKVFK-LMENFGVKPDVQTFGLIMNAWCSTGLIDE 289
Query: 182 EKC----FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
K KE++ D+ ++++ Y+++GR E E PN T+
Sbjct: 290 AKAVLLRMKEYD---LQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTT 346
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y M A+ ++ P+ +T RT + F++ + AE LE
Sbjct: 347 VISGYCSLAQMDDAMRVFQEM------RSRSVFPNMQTFRTLIWGFKEARWPRRAEEILE 400
Query: 298 ILKKA--VDDL-GVEVFEPLIRTYAAAGRTSPVM 328
++KA DL +E+ R+ A G V+
Sbjct: 401 YIRKAGFTPDLECIELVADCWRSIGADGEADRVL 434
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 119/284 (41%), Gaps = 8/284 (2%)
Query: 41 PAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS 100
P ++Q+M+ +++PD+ +N + + AE ++ EMK G ++++ L
Sbjct: 45 PLLLQQMEEDNVIPDAIFFNTLLNGYCEAGKMKEAEALVLEMKERG-CPLITSSYNTLIK 103
Query: 101 IYVEAGLFEKAERALKEL-ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPN 159
Y G E+A + L+E+ ++ N+ + + LI + N + + +R A
Sbjct: 104 GYGLDGQPEEAMKLLQEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVG 163
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+SY + Q+ L AE E ++ + R ++I Y G+++ + L
Sbjct: 164 PDVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRL 223
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTF 279
ER + G P T +F ++ ++ + ++K G K P +T
Sbjct: 224 IERMKMDGISP---TIAVF-NHLVKGYSESMKPHKVDKVFKLMENFGVK--PDVQTFGLI 277
Query: 280 MRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
M + +D A+ L +K+ V + L++ Y+ GR
Sbjct: 278 MNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGR 321
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 35 GHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTT 94
G ++ + ++ ++ P TY + + +L + + ++++M+ D V D
Sbjct: 4 GDHRQVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDN-VIPDAIF 62
Query: 95 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
F+ L + Y EAG ++AE + E++ R S+Y LI YG G E ++ + +
Sbjct: 63 FNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMA 122
Query: 155 LAFPNTANISYLNM-IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
+ N NM I+ + K+ A + D+ N + +AK G+
Sbjct: 123 KDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKP 182
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
+AE + + PN +T+ I + Y+ G + ++ +E+
Sbjct: 183 WDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIER 226
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A+A+L +MKE +L M ++ L+ Y++ G PE+ A + M ++ P+ TY
Sbjct: 286 LIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYT 345
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ++ + A RV +EM R V + TF L + EA +AE L+ +
Sbjct: 346 TVISGYCSLAQMDDAMRVFQEM-RSRSVFPNMQTFRTLIWGFKEARWPRRAEEILEYIRK 404
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
DL + + + G E R+
Sbjct: 405 AGFTPDLECIELVADCWRSIGADGEADRV 433
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 7/286 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A A+L++M +S +N ++ K G ++ ++QEMK+ PD TYN
Sbjct: 401 MWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYN 460
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + + AE + + +G V A+ T++ L + +G +++ R E+
Sbjct: 461 TIIYHLCNNDQMDEAEHIFGNLLEEG-VVANGITYNTLIHALLHSGRWQEGLRLANEMVL 519
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ +Y LI + GN+ + + N SY +I L +
Sbjct: 520 HGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRD 579
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + KE + T DI N +I K G A L E+ P+ T+ I
Sbjct: 580 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 639
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 286
++ + + A L+KA+ G VP+ T +++F ++
Sbjct: 640 WHCKVRLLDDASMLLDKAVS------GGIVPNERTWGMMVQNFVRQ 679
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 118/295 (40%), Gaps = 40/295 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A A+L ++ E+N+ N+++ G + + + M + PD +TYN+
Sbjct: 302 DEAYAMLGRVPEVNVVM----LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNIL 357
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L + A R+++EM+ G A + T+S L + G+++ A L ++ +
Sbjct: 358 MHGLCKLGRCGSAVRMLDEMEEKG-CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKG 416
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I G+ G L E R+ + ++ +Y +I L N + AE
Sbjct: 417 FSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAE 476
Query: 183 KCFKE-------------------------WESGC----------ATYDIRVTNVMIGAY 207
F W+ G D+ N +I A
Sbjct: 477 HIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKAL 536
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEG ++ + L E +G PN ++ + + + G ++ A++ ++ ++ G
Sbjct: 537 CKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
A+++ M +PD+ Y + AL A ++ A +++EM G AAD TF+++
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG-CAADVNTFNDVVLG 259
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
G +A R + + + Y FL+ +T E Y + L
Sbjct: 260 LCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM-----LGRVPEV 314
Query: 162 NISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 220
N+ LN +I+ + L A + ++ S D+ N+++ K GR +A +
Sbjct: 315 NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRML 374
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNG 246
+ +G PN T+ + RNG
Sbjct: 375 DEMEEKGCAPNIVTYSTLLHSFCRNG 400
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 114/295 (38%), Gaps = 12/295 (4%)
Query: 4 KAEALLEKM-KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+A LL++M + + S +N++++ A+ + + M + P ++T+ V
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
RAL + A ++ M R G V D + + V G +A L E+
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCV-PDAVLYQTVIHALVAQGGVAEAATLLDEMLLMG 245
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D++ + ++ G++ E R+ + + + ++Y +++ L + A
Sbjct: 246 CAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY 305
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
++ + N +I EG+L A EL E +G P+ T+ I
Sbjct: 306 AMLGRVPE----VNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G AV L++ + G P+ T T + F + D A L+
Sbjct: 362 CKLGRCGSAVRMLDEMEEKG------CAPNIVTYSTLLHSFCRNGMWDDARAMLD 410
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 132/315 (41%), Gaps = 9/315 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
A A E M+ + ++ F SL+ YA + +EMKA I TY++
Sbjct: 294 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSIL 353
Query: 63 MRALAAVNDISGAERVIEEMKRD-GRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +ND A+ + +E K + G + + +SN+ + ++G ++AE + E+E
Sbjct: 354 ISGFGKINDTQSADNLFKEAKTNLGDL--NGIIYSNIIHAHCQSGNMDRAEELVHEMEED 411
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ AY ++ Y + + ++ L+ + ISY +I + V + + A
Sbjct: 412 GIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKA 471
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
KE ES ++ + +++I + NA + E + G P+ + + +
Sbjct: 472 IAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEA 531
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ + G+M A+ LEK + PS+ R + F D+ A L+++++
Sbjct: 532 FCKMGNMDRAIRILEKM------QKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRR 585
Query: 302 AVDDLGVEVFEPLIR 316
+ V + LI
Sbjct: 586 SGCAPTVMTYNALIH 600
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 7/299 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F ++ YAK G A + M+A I P+++ + + A A D+ GA EEMK
Sbjct: 280 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMK 339
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + T+S L S + + + A+ KE + + Y +I + Q+GN+
Sbjct: 340 AEG-IELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNM 398
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + + +Y +M+ ++D F+ + C T I +
Sbjct: 399 DRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCL 458
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I Y K G++ A + + G N KT+ + ++ D A E+ + +G
Sbjct: 459 INLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSG- 517
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P + F + ++D A LE ++K F P+I +A AG
Sbjct: 518 -----LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAG 571
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 145/354 (40%), Gaps = 42/354 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K + E++KE S + + L+ LY K G K AI +EM++S I ++ TY++
Sbjct: 434 KKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSML 493
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ++D + A R+ EEM + G + D ++ L + + G ++A R L++++
Sbjct: 494 ISGFIHLHDFTNAFRIFEEMLKSG-LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKER 552
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN-------- 174
A++ +I + G++ I +R + ++Y +I L+
Sbjct: 553 MQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAV 612
Query: 175 ---------------------------LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
D+ A + F + + G D+ + ++ A
Sbjct: 613 SVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRAC 672
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
K GR+++A + + N + I D + R GD+ A D +++ + G
Sbjct: 673 CKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDG----- 727
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
P+ T +++ + D+ A+ ++ + ++ + LI+ +A A
Sbjct: 728 -VPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARA 780
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/326 (19%), Positives = 122/326 (37%), Gaps = 42/326 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L+ +M+E + ++S+M Y +K + + +K P +Y
Sbjct: 399 DRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCL 458
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ A + +EM+ G + + T+S L S ++ F A R +E+
Sbjct: 459 INLYVKIGKVAKAIAISKEMESSG-IKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSG 517
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + Y LI + + GN+ RI ++ +N ++ +I+
Sbjct: 518 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE------------ 565
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+A G ++ A ++ + RR G P T+
Sbjct: 566 -----------------------GFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGL 602
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+R ++ AV L K G P+ T MR + D+ A + +K+
Sbjct: 603 IRKNQVERAVSVLNKMSIAG------ITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEG 656
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVM 328
L V ++E L+R +GR +
Sbjct: 657 GLKLDVYIYETLLRACCKSGRMQSAL 682
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA K+KE L + +L+ K+G + A+ +EM + I +++ YN+ +
Sbjct: 645 KAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILI 704
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A D+ A ++++MK DG V + T+++ + +AG ++A+ + E+ +
Sbjct: 705 DGWARRGDVWEAADLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGL 763
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
+L Y LI + + + + ++LA +Y ++ L++
Sbjct: 764 KPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVTSLLS 814
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A+ +M + ++ +N L+ +A+ G + ++++MK + P+ +TY +
Sbjct: 679 QSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSY 738
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A D+ A+ VI+EM G + + T++ L + A L ++A + +E++
Sbjct: 739 INACCKAGDMQRAQTVIDEMSDVG-LKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAG 797
Query: 123 AHRDLSAYQFLIT 135
D +AY L+T
Sbjct: 798 LKPDEAAYHCLVT 810
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 124/287 (43%), Gaps = 15/287 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++E+ +L MK + + +N+++ + K G + + + +EMK PD T+N
Sbjct: 448 LSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFN 507
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A ++ EEM + G + T++ L + G ++ AE + ++ N
Sbjct: 508 TLISAYGRCGSNNDAAKMHEEMIKAG-FSPCINTYNALLNALARRGDWKAAESVILDMRN 566
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLK-- 176
+ ++Y ++ Y + GN+ + I +S+ FP+ + L VL N K
Sbjct: 567 KGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTL----VLANFKCR 622
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
L G E+ F+ + D+ + N M+ +AK + A E+ G P+ T
Sbjct: 623 SLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHN 682
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK--WVPSSETIRTFMR 281
D Y R GD A E+ + + GGK V + I+ F R
Sbjct: 683 SLMDMYARGGDCWKA----EEVLRMLQTSGGKPDLVSYNTVIKGFCR 725
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 132/323 (40%), Gaps = 23/323 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
+A + E+M E L S + +N ++ +Y K G +KI ++ EM++ + D +T +
Sbjct: 239 HRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCST 298
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A I A +K +G T++ L ++ +AG+F +A L E+E
Sbjct: 299 VLSACGREGLIDEAREFFSGLKSEGYKPGT-VTYNALLHVFGKAGIFSEALSVLSEMEEN 357
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
N D Y ++ Y + G E + ++ + PN ++Y +I + D+
Sbjct: 358 NCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNA--VTYTTIINAYGRVGDID 415
Query: 180 GAEKCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + F + E GC ++ N ++G K+ E ++ + G PN TW
Sbjct: 416 KALEMFDQMMELGCVP-NVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTM 474
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ-EKDVDGAEGFLE 297
+ G K + + G + P +T T + + + + D A+ E
Sbjct: 475 LAMCGKKGMHKYVNQVFREMKNCG------FEPDRDTFNTLISAYGRCGSNNDAAKMHEE 528
Query: 298 ILKKAVDDLGVEVFEPLIRTYAA 320
++K F P I TY A
Sbjct: 529 MIKAG--------FSPCINTYNA 543
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 131/298 (43%), Gaps = 7/298 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++L +M+E N ++ +N ++ Y + G E+ +I M + IMP++ TY +
Sbjct: 346 EALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTII 405
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V DI A + ++M G V + T++ + + + L E+ + L ++
Sbjct: 406 NAYGRVGDIDKALEMFDQMMELGCV-PNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGC 464
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + ++ + G+ G V +++R ++ ++ +I A K
Sbjct: 465 SPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAK 524
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E + I N ++ A A+ G + AE + R +G P+ ++ + Y
Sbjct: 525 MHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYA 584
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ G++K ++ +EK+I G PS +RT + + + + G E + L+K
Sbjct: 585 KGGNVK-GIEMIEKSIYD-----GDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQK 636
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 140/324 (43%), Gaps = 20/324 (6%)
Query: 6 EALLEKMKELNLGFSS-------MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 58
E L+++ +E G S + +N+L+ ++ K G + +++ EM+ ++ PD+ T
Sbjct: 306 EGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVT 365
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
YN + A VI+ M G + + T++ + + Y G +KA ++
Sbjct: 366 YNEVVAAYVRAGFHEEGAVVIDAMASKG-IMPNAVTYTTIINAYGRVGDIDKALEMFDQM 424
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+++ Y ++ + G+ E+ +I ++L + +I++ M+ +
Sbjct: 425 MELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMH 484
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ F+E ++ D N +I AY + G +A ++ E + G P T+
Sbjct: 485 KYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNAL 544
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH-FEQEKDVDGAEGFLE 297
+ R GD K A E I R G + SET + M H + + +V G +E
Sbjct: 545 LNALARRGDWKAA----ESVILDMRNKGFR---PSETSYSLMVHSYAKGGNVKG----IE 593
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAA 321
+++K++ D + L+RT A
Sbjct: 594 MIEKSIYDGDIFPSWMLLRTLVLA 617
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 107/263 (40%), Gaps = 13/263 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM- 63
AE+++ M+ S ++ ++ YAK G+ + I I + + I P WM
Sbjct: 557 AESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPS------WML 610
Query: 64 -RALAAVN----DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
R L N ++G ER + +++ G D +++ SI+ + ++++A L+ +
Sbjct: 611 LRTLVLANFKCRSLTGMERAFQALQKHG-YKPDLVLCNSMLSIFAKNNMYDRAHEMLRLI 669
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ DL + L+ +Y + G+ + + R L+ + +SY +I+ +
Sbjct: 670 HDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLM 729
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ E S I N I YA +G ++ PN T++I
Sbjct: 730 QEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIV 789
Query: 239 SDYYLRNGDMKLAVDCLEKAIDT 261
+D Y + A+D + K D
Sbjct: 790 ADGYCKARRYDEAIDFVSKIKDV 812
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 90/240 (37%), Gaps = 37/240 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-DISGAERVIEEM 82
+ +++ Y++TG + I + M S + P TYNV + + +++EM
Sbjct: 225 YTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEM 284
Query: 83 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 142
+ G + D T S + S GL ++A L++ Y L+ ++G+ G
Sbjct: 285 RSRG-LDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGI 343
Query: 143 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
SE + + E+ C D N
Sbjct: 344 FSEALSVLSEME----------------------------------ENNCPP-DAVTYNE 368
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
++ AY + G E + + +G PNA T+ + Y R GD+ A++ ++ ++ G
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG 428
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 118/262 (45%), Gaps = 3/262 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A LL +M + + + + SL++ K G ++ + M PD YNV
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + D+ A R+ EEM G + +T +++L S + G F + + K++ +
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFT-YNSLLSGFSRKGEFGRVQSLFKDMLRQ 221
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPG 180
++ + L+ + + G++ E +R++ +R L P +SY +++ + +
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV-VSYNTLMRGMCSKGKPHE 280
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A++ +E DI N++I Y+K G L++A +L + G +P+A ++ D
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
R G + A + I G
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANG 362
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 100/236 (42%), Gaps = 3/236 (1%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
+++ ++ +N L+ + AK+G + + +M + +P++YTY +R+L
Sbjct: 10 QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFE 69
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
A V M G + + ++S L + ++A L E+ + ++ Y L
Sbjct: 70 EARSVFRGMAAQG-CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL 128
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-WESGC 192
++ + G L E ++ + + Y +I D+ A + F+E E GC
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ N ++ ++++G + L + R+G PN T+ D + + GDM
Sbjct: 189 IP-TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 1/216 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L E+M E + +NSL++ +++ G ++ ++ ++M +P+ +T+N +
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ D+ A R+ EM+ G D +++ L G +A+R L+E+
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLG-CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ +Y LI Y ++G L +++ + + SY +I L + A
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFV 353
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
FK+ + + D V ++ + RL + EL
Sbjct: 354 VFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCEL 389
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 6/157 (3%)
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
Y +L+ Q E ++R + + SY +I L + + A + E
Sbjct: 55 YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
G ++ ++ K G+L+ A +L R RG P+ + + D + + GDM
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174
Query: 250 LAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQE 286
A E+ ++ G +P+ T + + F ++
Sbjct: 175 EAYRLFEEMLEKG------CIPTVFTYNSLLSGFSRK 205
>gi|225428586|ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Vitis vinifera]
Length = 492
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+LM + + G EK+ I EM P++Y+Y+V M A + E++ EEM
Sbjct: 248 FNALMVCFYRDGGVEKVEEIWAEMGEWDCNPNAYSYSVLMAAFCDEGRMGEVEKLWEEM- 306
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
R ++ D ++ + + G E+ E +E+E Y+ LI Y + G++
Sbjct: 307 RMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSGIQSTCVTYEHLINGYCEIGDV 366
Query: 144 SEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK------EWESGCATYD 196
+++ + R F A + MI +L N + + A K + E+ +Y+
Sbjct: 367 DSAVLLYKDMCRKGFRAEAR-TVDGMILLLCNNRRVHEALKLLRVAMGNVEFAPRGKSYE 425
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
+I + +EG++E A +L+ +G P + + F D Y++ G+ ++A
Sbjct: 426 -----TLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYMKQGNKEIA 475
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 22/232 (9%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
TF+ L + G EK E E+ + + + +Y L+ + G + EV ++W +
Sbjct: 247 TFNALMVCFYRDGGVEKVEEIWAEMGEWDCNPNAYSYSVLMAAFCDEGRMGEVEKLWEEM 306
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-----SGCATYDIRVTNVMIGAYA 208
R+ ++Y +I + ++ E+ F+E E S C TY+ +I Y
Sbjct: 307 RMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSGIQSTCVTYE-----HLINGYC 361
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
+ G +++A L + R+G A+T + N + A+ L A+ +
Sbjct: 362 EIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVHEALKLLRVAMGN-----VE 416
Query: 269 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
+ P ++ T ++ F + EG +E K ++ + F+P + Y+A
Sbjct: 417 FAPRGKSYETLIKGFCE-------EGKMEEASKLQSEMVGKGFKPTLEIYSA 461
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+KM++ + + +++L+ L K K +I +K S PD YN +
Sbjct: 4 LQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGK 63
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V + T++S L ++YVE F +A E+ DL+
Sbjct: 64 AKLFREARSLISEMKTAG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLT 122
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ G E +++ +R +SY +++V + + A F+
Sbjct: 123 TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLM 182
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N MI Y K E A L + + RG +PN+ T+ + + G +
Sbjct: 183 QRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKL 242
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 243 DRAAMLFQKLRSSG 256
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 15/238 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS++ +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 174 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 233
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 234 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 292
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 293 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEAKDITVFERMIHLLSKYKKYSNVV 347
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + D V V++ AY K + A ++ + G +FSD
Sbjct: 348 EVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGC--------VFSD 397
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + +N+++ ++ K + ++I EMK + +MP++ +Y+ +
Sbjct: 34 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 93
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V EM R+ + D TT + + +Y + G+ ++A++ +
Sbjct: 94 TMYVENKKFLEALSVFSEM-REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 152
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y L+ +YG E ++R ++ ++Y +MI + + A
Sbjct: 153 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANN 212
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E +S + + +I + K G+L+ A L ++ R G + + ++ Y
Sbjct: 213 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYE 272
Query: 244 RNG 246
R G
Sbjct: 273 RAG 275
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 208 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 267
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 268 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 322
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I V++N L
Sbjct: 323 EAKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS------NVIAVVLNAYGKL 375
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
++ A + E E GC D
Sbjct: 376 QEFDKANDVYMEMQEVGCVFSD 397
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 139/338 (41%), Gaps = 31/338 (9%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA L +M E + + NS++ K +K +I+Q+M S I PD +TY++
Sbjct: 226 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 285
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + AERV+E+M G + T+++L Y +G++ ++ R K++ +
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAG-TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 344
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP---------NTANISYLNMIQVL 172
+ I + G +E I+ S+ L P N + + Y + V
Sbjct: 345 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVW 404
Query: 173 VNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
V ++ F + + V N++I AYA+ G ++ A + E + +G P+
Sbjct: 405 VMWHNI------FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 458
Query: 233 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET-----IRTFMRHFEQEK 287
T+ R G + A+ +D G VP SE I+ H E
Sbjct: 459 VTFATVISSLCRIGRLDDALHKFNHMVDIG-------VPPSEAVYGCLIQGCCNHGEL-- 509
Query: 288 DVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
V E E++ K + GV+ F +I GR +
Sbjct: 510 -VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVA 546
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 120/299 (40%), Gaps = 40/299 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE +LE+M E +S+ +NSL+ Y+ +G + + ++M + ++P N +
Sbjct: 297 DKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSF 356
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------- 87
+ AL + A+ + + M G
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLT 416
Query: 88 --VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
+A + F+ L + Y G+ +KA ++++N+ D + +I+ + G L +
Sbjct: 417 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 476
Query: 146 -VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVM 203
+++ + + P + + Y +IQ N +L A++ E ++ + +
Sbjct: 477 ALHKFNHMVDIGVPPSEAV-YGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 535
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I KEGR+ +++ + + G PN T+ + Y G+M+ A L+ G
Sbjct: 536 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 594
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A ALL+ M + + + + +L+ Y K G + + ++M + P S Y++
Sbjct: 581 EEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSII 640
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+++ EM G + T L + ++A L++L N
Sbjct: 641 LHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGL-CRNNCTDEANMLLEKLFAMN 699
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGA 181
D+ + +I+ + G E ++ ++ + NI +Y MI L+ + A
Sbjct: 700 VKFDIITFNIVISAMFKVGRRQEAKELFDAIS-TYGLVPNIQTYSMMITNLIKEESYEEA 758
Query: 182 EKCFKEWESGCATYDIRVTNVMI 204
+ F E D R+ N ++
Sbjct: 759 DNLFISVEKSGHASDSRLLNHIV 781
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A LLEK+ +N+ F + FN +++ K G ++ + + ++P+ TY++
Sbjct: 685 TDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSM 744
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A+ + +++ G A+D +++ + + KA L +
Sbjct: 745 MITNLIKEESYEEADNLFISVEKSGH-ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 803
Query: 122 NAHRDLSAYQFLITLYGQTGNLSE 145
N + S L +L+ + G E
Sbjct: 804 NLTLEASTISLLASLFSREGKYRE 827
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 6/269 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 57
+++A LL M + + G S P + +++ + K G +K + EM I+PD
Sbjct: 174 SQEALELLHMMAD-DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVV 232
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
TYN + AL + A V+ M ++G V D T++++ Y +G ++A LK+
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ + D+ Y L+ + G E +I+ S+ +Y ++Q
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
L D V +++I AYAK+G+++ A + + R++G +PNA T+
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
++G ++ A+ E+ ID G G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 111/295 (37%), Gaps = 36/295 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA +L M + + M +NS++ Y +G P++ +++M++ + PD TY++
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L A ++ + M + G + + TT+ L Y G + L +
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNT-------------------- 160
H D + LI Y + G + + ++ +R PN
Sbjct: 367 IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 161 -------------ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
NI Y ++I L AE+ E + N +I ++
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEGR+ +E+L E R G PN T+ + Y G M A+ L + G
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 4/255 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A + KM++ L +++ + +++ + K+G E ++M + P + YN
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L N AE +I EM G + + F+++ + + G ++E+ + +
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRG-ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ Y LI Y G + E ++ + ++Y +I + + A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
FKE ES + DI N+++ + R A+EL R G T+ I
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 242 YLRNGDMKLAVDCLE 256
+N KL D L+
Sbjct: 626 LCKN---KLTDDALQ 637
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 102/244 (41%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L+ +M + + +++ FNS++ + K G + + + M + P+ TYN
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A +++ M G + + T+S L + Y + E A KE+E+
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y ++ QT + ++ + + +Y ++ L K A
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+ + R N+MI A K GR + A++L G PN T+ + ++
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696
Query: 243 LRNG 246
+ G
Sbjct: 697 IGQG 700
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 97/242 (40%), Gaps = 9/242 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL M + L +++ +++L+ Y K E + +EM++S + PD TYN+
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L + A+ + + G + +T++ + + L + A + + L +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESG-TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI----SYLNMIQVLVNLKDL 178
+ + +I + G E + L +AF + + +Y M + ++ L
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEA----KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ F E T D + N ++ + G + A + A T +F
Sbjct: 703 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLF 762
Query: 239 SD 240
D
Sbjct: 763 ID 764
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 130/326 (39%), Gaps = 28/326 (8%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
LL MK+ + S + +N+++ A+ G E + + EM+ I PD TYN + A
Sbjct: 191 LLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGAC 250
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A AE V M G + D T+S L + + EK L+E+E D
Sbjct: 251 AHRGLGDEAEMVFRTMNESG-IVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPD 309
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG---- 180
+++Y L+ Y + G++ E ++R ++ A N A S VL+NL G
Sbjct: 310 ITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYS------VLLNLYGKHGRYDD 363
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE--IF 238
F E + D N++I + + G + L +PN +T+E IF
Sbjct: 364 VRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIF 423
Query: 239 S--DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ L K+ + EK + VPSS+ + F Q + A
Sbjct: 424 ACGKGGLYEDAKKILLHMNEKGV----------VPSSKAYTGVIEAFGQAALYEEALVMF 473
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAG 322
+ + + VE + LI +A G
Sbjct: 474 NTMNEVGSNPTVETYNSLIHAFARGG 499
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/344 (18%), Positives = 144/344 (41%), Gaps = 8/344 (2%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
L +M+ + + +N+L+ A G ++ + + M S I+PD TY+ ++
Sbjct: 226 GLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTF 285
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+N + ++ EM+ G + D T+++ L Y E G ++A ++++ +
Sbjct: 286 GKLNRLEKVSELLREMECGGNL-PDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVAN 344
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y L+ LYG+ G +V ++ ++++ + +Y +IQV F
Sbjct: 345 AATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFH 404
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ +++ +I A K G E+A+++ +G P++K + + + +
Sbjct: 405 DMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAA 464
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
+ A+ + G P+ ET + + F + AE L + ++
Sbjct: 465 LYEEALVMFNTMNEVGSN------PTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKR 518
Query: 307 GVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
V F +I + G+ + ++MEK E ++ LEA+
Sbjct: 519 DVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANC-EPNELTLEAV 561
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 122/296 (41%), Gaps = 21/296 (7%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
++TL + G +K + EM ++ ++ Y+Y + A + ++ MK++
Sbjct: 140 MITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQE- 198
Query: 87 RVAADWTTFSNLASIYVEAGL-FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
RV+ T++ + + GL +E E+ + D+ Y L+ G E
Sbjct: 199 RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDE 258
Query: 146 VYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++R++ + P+ SYL +Q L L + +E E G DI NV+
Sbjct: 259 AEMVFRTMNESGIVPDINTYSYL--VQTFGKLNRLEKVSELLREMECGGNLPDITSYNVL 316
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC-LEKAIDTG 262
+ AYA+ G ++ A + + + G NA T+ + + Y ++G D LE +
Sbjct: 317 LEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNT 376
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
D G + + I+ F G G+ + + D+ E EP ++TY
Sbjct: 377 DPDAGTY---NILIQVF-----------GEGGYFKEVVTLFHDMAEENVEPNMQTY 418
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 95/244 (38%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A + +M+ ++ ++ L+ LY K G + + + EMK S+ PD+ TYN+
Sbjct: 327 KEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNIL 386
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + +M + V + T+ L + GL+E A++ L + +
Sbjct: 387 IQVFGEGGYFKEVVTLFHDMAEE-NVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKG 445
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
AY +I +GQ E ++ ++ N +Y ++I AE
Sbjct: 446 VVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAE 505
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
D+ N +I A+ + G+ E A + + +PN T E Y
Sbjct: 506 AILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIY 565
Query: 243 LRNG 246
G
Sbjct: 566 CSAG 569
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A + M E+ + +NSL+ +A+ G ++ AI+ M S + D +++N
Sbjct: 465 LYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFN 524
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + EM++ + T + SIY AGL ++ E +E++
Sbjct: 525 GVIEAFRQGGQYEEAVKSYVEMEK-ANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKA 583
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
+ Y ++ LY + L++ Y +
Sbjct: 584 SGILPSVMCYCMMLALYAKNDRLNDAYNL 612
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 141/359 (39%), Gaps = 42/359 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA L +M + ++ +N+L+ Y+ TG ++ + +EM+ SI+PD T ++
Sbjct: 271 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 330
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M +L I A V + M G+ +
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
A D+ TF+ L Y G+ +KA E+ + D+ Y+ +I + G + +
Sbjct: 391 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 450
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ + +Y +IQ L A++ E + DI + +I
Sbjct: 451 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K GR+ +A+ + + G P+A + + D Y G M+ A+ + + G
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG------ 564
Query: 269 WVPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSP 326
P+ T + + + +D G F E+L++ + + ++ +I AGRT P
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTI-LYSIIIDGLFQAGRTVP 622
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 15/267 (5%)
Query: 4 KAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A+ LL M E S + +N+++ + K G K + +EM I PD TYN
Sbjct: 200 QADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 259
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + AE + +M + +W T++NL Y G +++A R KE+
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRH 318
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------VLVNL 175
+ D+ L+ + G + E ++ ++ + N SY M+ LV++
Sbjct: 319 SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDM 378
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
DL F D NV+I AYA G L+ A + R G P+ T+
Sbjct: 379 TDL------FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTG 262
R G M A++ + ID G
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQG 459
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 117/284 (41%), Gaps = 18/284 (6%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA-DWTTFS 96
E + ++ +PD ++Y++ +++L A+ ++ M G V + + ++
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 223
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--R 154
+ + + G KA KE+ R DL Y ++ + + + R + +
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 283
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 214
PN N +Y N+I + A + FKE D+ ++++G+ K G+++
Sbjct: 284 RVLPN--NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341
Query: 215 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 274
A ++ + +G +P+ ++ I + Y G + VD + D GDG P
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL---VD-MTDLFDLMLGDG--IAPDFY 395
Query: 275 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
T ++ + +D A I+ + D GV +P + TY
Sbjct: 396 TFNVLIKAYANCGMLDKA----MIIFNEMRDHGV---KPDVVTY 432
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/246 (17%), Positives = 88/246 (35%), Gaps = 36/246 (14%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + +M++ + + + +++ + G + +M + PD Y YN
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A+ +I E+ +G + D FS++ + + G A+ N
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNG-MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H D Y L+ Y G + + R++ ++ A G
Sbjct: 528 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA-----------------------G 564
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E ++ V ++ Y K GR++ L +RG P+ + I D
Sbjct: 565 IEP------------NVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 612
Query: 241 YYLRNG 246
+ G
Sbjct: 613 GLFQAG 618
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 13/235 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + + + L ++ ++ LM Y G EK + M ++ I P+ Y +
Sbjct: 518 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 577
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ I + EM + G + +S + +AG A+ E+
Sbjct: 578 GYCKIGRIDEGLSLFREMLQRG-IKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 636
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEK 183
D+ Y ++ + E +++ LR A NI LN MI + + + A+
Sbjct: 637 MDICTYNIVLRGLFKNRCFDEAIFLFKELR-AMNVKINIITLNTMIDGMFQTRRVEEAKD 695
Query: 184 CFKEWE-----SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
F TY I +TN++ KEG +E AE++ + G +PN++
Sbjct: 696 LFASISRSRLVPSVVTYSIMITNLI-----KEGLVEEAEDMFSSMQNAGCEPNSR 745
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 108/293 (36%), Gaps = 7/293 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ L+ ++ + + F+S++ K G I + PD+ Y++ M
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V + A RV + M G + + + L + Y + G ++ +E+ R
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAG-IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 600
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y +I Q G + + + +Y +++ L + A
Sbjct: 601 KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 660
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
FKE + +I N MI + R+E A++L R P+ T+ I +
Sbjct: 661 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLI 720
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ G ++ A D + G P+S + +R ++ ++ A +L
Sbjct: 721 KEGLVEEAEDMFSSMQNAG------CEPNSRLLNHVVRELLKKNEIVRAGAYL 767
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 108/247 (43%), Gaps = 1/247 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A + E+M+E + +++ F +L+ + K G+ + +EM I D YN
Sbjct: 331 QDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNAL 390
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L V D+ A ++EEM+ +G + D T++ L + + G + A +E+ +
Sbjct: 391 ANGLCRVRDLKAANDIVEEMRNNG-LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEG 449
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ ++G + RI + A N +Y +I D+
Sbjct: 450 VALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGF 509
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K KE ++ + NV++ + G+++NA+ L G P+ T+ I D +
Sbjct: 510 KLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGH 569
Query: 243 LRNGDMK 249
++G ++
Sbjct: 570 CKHGKVR 576
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 1/243 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+LM+ K A+ M + + PD YTY +M+ L I A + EEM+
Sbjct: 282 FNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMR 341
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + F+ L + + G +E+ R DL AY L + +L
Sbjct: 342 ERG-VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDL 400
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
I +R ++Y +I +L A + +E D +
Sbjct: 401 KAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTL 460
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I +K GR ++E + G +P+ T+ + D + +N D+K L++ + GR
Sbjct: 461 ISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGR 520
Query: 264 GDG 266
G
Sbjct: 521 KPG 523
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKI---PAIIQEMKASSIMPDSYTYN 60
KAE ++E +K + + +N+L+ + K G K+ AI++EM A+ I P+ T+N
Sbjct: 218 KAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFN 277
Query: 61 VWMRALAAVNDISGAERVIEEMKRDG----------------------RVAADW------ 92
+ ++ A+ EEM+R G A W
Sbjct: 278 TLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGL 337
Query: 93 ------TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
TF+ L + + + + ++A + ++ ++ + + +I + + G + E
Sbjct: 338 GLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEG 397
Query: 147 YRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
+ + S+ FPN + +Y +I L +++ A+K E E+ D+ N++I
Sbjct: 398 FALHNSMLDEGIFPNVS--TYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILI 455
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAV 252
G + K+G AE+L G PN T+ D Y G++K A+
Sbjct: 456 GGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 36/237 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A L + + E +L +++ FN+++ + K G E+ A+ M I P+ TYN
Sbjct: 358 MIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYN 417
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L ++ A++++ EM+ + + AD T++ L + + G KAE+ L E+ N
Sbjct: 418 CLIAGLCRNQNVRAAKKLLNEME-NYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLN 476
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y L+ Y GNL ++ +
Sbjct: 477 VGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQME-------------------------- 510
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
KE + ++ NV+I + K G+LE+A L +G +PN T+++
Sbjct: 511 -----KEGKRA----NVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDV 558
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 6/232 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA---AVNDISGAERVIE 80
FN + K G K +I+++KA P+ TYN + + + A+ +++
Sbjct: 203 FNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILK 262
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
EM + ++ + TF+ L + + A+ A +E++ + ++ Y LI
Sbjct: 263 EMLAN-KICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNN 321
Query: 141 GNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
G L E +W + + NI N +I K + A K F + +
Sbjct: 322 GKLDEAIALWDKM-VGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAIT 380
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
N MI A+ K G +E L G PN T+ RN +++ A
Sbjct: 381 FNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAA 432
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 1/249 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L ++M L +++ +N L++ + G + A++ EM + ++PD +TY++ L+
Sbjct: 120 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
D + + ++G D+T S L + + G AE L+ L N
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTC-SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 238
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI Y QTG L + + ++ +I+Y +I L + + A+ E
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + N +I AY + G+LE + + G PN ++ + + +NG
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358
Query: 248 MKLAVDCLE 256
+ AV L+
Sbjct: 359 IPEAVAILD 367
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 107/255 (41%), Gaps = 5/255 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE +L+ + L + + +N+L+ Y +TG E + +MK+ I PD TYN +
Sbjct: 222 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 281
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L I+ A+ ++ EM+ +G V TF+ L Y G EK L E++
Sbjct: 282 GLCKAERITNAQDLLMEMQDNG-VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 340
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ +Y ++ + + G + E I + + PN Y +I V A
Sbjct: 341 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ--VYNAIIDAYVEHGPNDQAF 398
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
++ +S + I N++I + ++ AEE+ P+A ++
Sbjct: 399 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 458
Query: 243 LRNGDMKLAVDCLEK 257
G++ A+D ++
Sbjct: 459 CYRGNIDKALDLQQR 473
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +L +M+E L + + + S++ + K G + AI+ +M ++P++ YN
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 384
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A ++E+MK +G ++ T++ L +AE + L N
Sbjct: 385 IDAYVEHGPNDQAFILVEKMKSNG-ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D +Y LI+ GN+ + + + + + +Y +I L L E
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 503
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERARRR 226
+++ + N+M+ AY+K G AE+L KE ++R
Sbjct: 504 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/234 (17%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + +MK ++ + +N+L+ K ++ EM+ + + P T+N
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 314
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + V+ EM+ +G + + ++ ++ + + + G +A L ++ +++
Sbjct: 315 IDAYGRTGQLEKCFIVLSEMQENG-LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 373
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I Y + G + + + ++ + + ++Y +I+ L N + AE
Sbjct: 374 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 433
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ + D N +I A G ++ A +L++R + G +T+
Sbjct: 434 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 487
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 8/292 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + A A+L++M +S +N ++ K G ++ ++QEMK+ PD TYN
Sbjct: 398 MWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYN 457
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + + AE + + +G V A+ T++ L + G +++ R E+
Sbjct: 458 TMIYHLCNNDLMEEAEHIFRNLIEEG-VVANGITYNTLIHALLRNGRWQEGLRLASEMLL 516
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ +Y LI + GN+ + + N SY +I L +
Sbjct: 517 HGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRD 576
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + KE + T DI N +I K G A L E+ P+ T+ I
Sbjct: 577 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 636
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF-EQEKDVDG 291
++ + + A L+KAI G VP+ T +++F Q +++G
Sbjct: 637 WHCKVRLLDDAAMLLDKAIS------GGIVPNERTWGMMVQNFVRQTVNLEG 682
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/295 (18%), Positives = 119/295 (40%), Gaps = 40/295 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A A+L ++ E+N+ + N+++ G + + + M + PD +TY++
Sbjct: 299 DEACAMLGRLPEVNV----VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSIL 354
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L + A R+++EM+ G A + T+S L + G+++ A L ++ +
Sbjct: 355 MHGLCKLGRFGSAVRMLDEMEEKG-CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKG 413
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I + G L + R+ + ++ +Y MI L N + AE
Sbjct: 414 FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAE 473
Query: 183 KCFKE-------------------------WESGC----------ATYDIRVTNVMIGAY 207
F+ W+ G D+ N +I A
Sbjct: 474 HIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKAL 533
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEG ++ + L E +G PN ++ + + + G ++ A++ ++ ++ G
Sbjct: 534 CKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 106/250 (42%), Gaps = 1/250 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L++M+E + + +++L+ + + G + A++ +M A +S YN + AL
Sbjct: 370 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALC 429
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ A R+++EMK G D T++ + L E+AE + L +
Sbjct: 430 KDGKLDQATRLVQEMKSQG-CKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANG 488
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI + G E R+ + L ISY +I+ L ++ + +E
Sbjct: 489 ITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEE 548
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + N++I K G++ +A EL + +G P+ T+ + + G
Sbjct: 549 MVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 608
Query: 248 MKLAVDCLEK 257
A++ LEK
Sbjct: 609 THAALNLLEK 618
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
A+++ M +PD+ Y + AL A ++ A +++EM G AAD TF++L
Sbjct: 198 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG-CAADVNTFNDLVLG 256
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
G +A R + + + + Y FL+ +T E + L P
Sbjct: 257 LCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRL----PEV- 311
Query: 162 NISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELK 220
N+ LN +I+ + L A + ++ S D+ ++++ K GR +A +
Sbjct: 312 NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRML 371
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNG 246
+ +G PN T+ + RNG
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNG 397
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 114/301 (37%), Gaps = 24/301 (7%)
Query: 4 KAEALLEKM-KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+A LL++M + + S +N +++ A+ + + M + P ++T+ V
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
RAL + A ++ M R G V D + + V G +A L E+
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCV-PDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D++ + L+ G + E R+ + + ++Y ++Q L
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCR-------- 294
Query: 183 KCFKEWESGCATY------DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
++ + CA ++ + N +I EG+L A EL E +G P+ T+
Sbjct: 295 --TRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYS 352
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
I + G AV L++ + G P+ T T + F + D A L
Sbjct: 353 ILMHGLCKLGRFGSAVRMLDEMEEKG------CAPNIVTYSTLLHSFCRNGMWDDARAML 406
Query: 297 E 297
+
Sbjct: 407 D 407
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 90/273 (32%), Gaps = 30/273 (10%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL++M + FN L+ G + ++ M MP TY +
Sbjct: 230 EAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLL 289
Query: 64 RALAAVN---------------DISGAERVIEEMKRDGRVA---------------ADWT 93
+ L ++ VI +G++A D
Sbjct: 290 QGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVH 349
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
T+S L + G F A R L E+E + ++ Y L+ + + G + + +
Sbjct: 350 TYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 409
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
+ + Y +I L L A + +E +S DI N MI +
Sbjct: 410 LAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLM 469
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E AE + G N T+ LRNG
Sbjct: 470 EEAEHIFRNLIEEGVVANGITYNTLIHALLRNG 502
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 142 AQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLIN 201
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + TF+ L + + G + A K++ +++
Sbjct: 202 GLCKESKMDDANELFDEMLVKGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 260
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A +
Sbjct: 261 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEH 320
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I +EGR +AE++ G P+A+T+ + + + +
Sbjct: 321 RKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 380
Query: 245 NGDM 248
GD+
Sbjct: 381 XGDV 384
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 210 DDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 269
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM G + D T++ L + + G + A K + N
Sbjct: 270 IYGLCKKGDLKQAHHLIDEMSVKG-LKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQEN 328
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G RS+ AE
Sbjct: 329 IRLDEVAYTALISGXCQEG---------RSV--------------------------DAE 353
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E S D R ++I + K G + +L + +R G P+ T+ +
Sbjct: 354 KMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVL 409
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 133/303 (43%), Gaps = 11/303 (3%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +++++ Y + G +K+ +I+ MK + P+SY Y + L + ++ AE E
Sbjct: 725 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 784
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M R G + D ++ L + + G A + E+ +R+ D+ Y +I+ + Q G
Sbjct: 785 MIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 843
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVT 200
++ E +++ + ++++ +I + A + ++GC+ ++
Sbjct: 844 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP-NVVTY 902
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
+I KEG L++A EL + G PN T+ + ++G+++ AV +
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV----- 957
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAVDDLGVEVFEPLIRTYA 319
G + + T T M + + ++D A+ L E+L K + V F L+ +
Sbjct: 958 -GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV-TFNVLMNGFC 1015
Query: 320 AAG 322
G
Sbjct: 1016 LHG 1018
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL +M ++ L + +NS++ K+G+ E+ ++ E +A+ + D+ TY
Sbjct: 916 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 975
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A ++ A+ +++EM G + TF+ L + + G+ E E+ L + +
Sbjct: 976 MDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + + L+ Y NL I++ + +Y N+++ +++ A
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 1094
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+E + + + +V+I + K + A E+ ++ RR G + + ++ FSD
Sbjct: 1095 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 1154
Query: 243 LRNGDMKLAVDCLEKAID 260
+ VD +++ I+
Sbjct: 1155 YKGKRPDTIVDPIDEIIE 1172
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 12/251 (4%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E EA E +++ L ++ + +L+ + K G EM + I PD TY
Sbjct: 775 LAEAEEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + D+ A ++ EM G + D TF+ L + Y +AG + A R +
Sbjct: 834 AIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 892
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE----VYRIWR-SLRLAFPNTANISYLNMIQVLVNL 175
++ Y LI + G+L ++ +W+ L+ PN +Y +++ L
Sbjct: 893 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ---PNI--FTYNSIVNGLCKS 947
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
++ A K E+E+ D ++ AY K G ++ A+E+ + +G P T+
Sbjct: 948 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 1007
Query: 236 EIFSDYYLRNG 246
+ + + +G
Sbjct: 1008 NVLMNGFCLHG 1018
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/264 (18%), Positives = 102/264 (38%), Gaps = 1/264 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +M ++ + + ++++ + + G + + EM + PDS T+ +
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A RV M + G + + T++ L + G + A L E+
Sbjct: 873 GYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y ++ ++GN+ E ++ A N ++Y ++ ++ A++
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
KE I NV++ + G LE+ E+L +G PNA T+ Y
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 1051
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGK 268
++K A + G G GK
Sbjct: 1052 RNNLKAATAIYKDMCSRGVGPDGK 1075
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/261 (18%), Positives = 101/261 (38%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T A + + E+ + ++ +N ++ + G ++ ++ M+ PD +Y+
Sbjct: 670 TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYST 729
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ++ ++IE MKR G + + + ++ + +AE A E+ +
Sbjct: 730 VVNGYCRFGELDKVWKLIEVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 788
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D Y LI + + G++ + + + ++Y +I + D+ A
Sbjct: 789 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 848
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K F E D +I Y K G +++A + + G PN T+ D
Sbjct: 849 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 908
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ GD+ A + L + G
Sbjct: 909 LCKEGDLDSANELLHEMWKIG 929
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E E LL M + ++ FNSL+ Y + + AI ++M + + PD TY
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ ++ A + +EMK G + +T+S L +++ F +A ++
Sbjct: 1079 NLVKGHCKARNMKEAWFLFQEMKGKG-FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 1137
Query: 121 RNAHRDLSAYQFL 133
D + F
Sbjct: 1138 EGLAADKEIFDFF 1150
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 129/317 (40%), Gaps = 37/317 (11%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE + +MK LNL P+N ++ +Y + +K+ A+ E+ + + PD++TY + +R
Sbjct: 90 AEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDKVRAMYDELSSLGVAPDAHTYLIVLR 149
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + G E A+ F + E +
Sbjct: 150 AKQKIGGFDGIE-------------AEVRKFLD---------------------EQLTSR 175
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ L Y+ ++ +Y +L+ + + L F ++ SY ++ L ++ AE+
Sbjct: 176 QPLFIYECMLRIYTLLRDLTAIENLRSILLKTFKKFSSSSYNCLLDAYRQLGEVERAERL 235
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F E + T +I+ MI YA GR+E A EL ++ R G + + + Y+
Sbjct: 236 FNEIGNKF-TLNIQSYRAMIAVYASNGRMEKANELYKQLFRAGFECHPAIYHAMVAGYID 294
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
D A+ KA D R G P T +R ++ D AE + LK+
Sbjct: 295 ARDHSNALIQYGKAWD--RSLLGHPKPLRATTLLVLRVLAEQGDFSRAESIVRDLKRERQ 352
Query: 305 DLGVEVFEPLIRTYAAA 321
VEV+ L++ Y A
Sbjct: 353 GSDVEVYNWLLKAYIKA 369
>gi|302822123|ref|XP_002992721.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
gi|300139462|gb|EFJ06202.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
Length = 449
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 110/297 (37%), Gaps = 40/297 (13%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
P TYN+ RA A AE + E+ R + D TF+ + Y + GL+ E
Sbjct: 167 PSLATYNMLTRACAQAGLTDKAEALFLELLRRDDLKPDAYTFNGIMDAYAKKGLYRDMEY 226
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
LKE+ DL + LI YG+ G+ ++ R ++S LV
Sbjct: 227 KLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKS-------------------LV 267
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
NL SGC N M+ +Y + L E++ R G P+
Sbjct: 268 NL--------------SGCKP-SATTFNSMLASYGQSRELGKMEQVLVRMDMAGLGPDLT 312
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ Y R G++ C +K + + P T+ +R + + VD AE
Sbjct: 313 TFNTLMSSYGRAGELDTMRKCFDKMVRS------PVKPQVSTLDVLLRAYAEHGLVDEAE 366
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
K V + L + Y + + + KME+ V + LL+A+
Sbjct: 367 ALFINASKLDIKPAVSSYLILFKAYGEERQLDKMTVLMSKMEQSGVESGQEFLLQAL 423
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 36/243 (14%)
Query: 1 MTEKAEAL-LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
+T+KAEAL LE ++ +L + FN +M YAK G + ++EM + PD T+
Sbjct: 184 LTDKAEALFLELLRRDDLKPDAYTFNGIMDAYAKKGLYRDMEYKLKEMSEHGVRPDLVTF 243
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
NV + A D ER + + TTF+++ + Y ++ K E+ L ++
Sbjct: 244 NVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASYGQSRELGKMEQVLVRMD 303
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
DL+ + L++ YG+ G L +
Sbjct: 304 MAGLGPDLTTFNTLMSSYGRAGELDTM--------------------------------- 330
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
KCF + + +V++ AYA+ G ++ AE L A + P ++ I
Sbjct: 331 --RKCFDKMVRSPVKPQVSTLDVLLRAYAEHGLVDEAEALFINASKLDIKPAVSSYLILF 388
Query: 240 DYY 242
Y
Sbjct: 389 KAY 391
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 142/329 (43%), Gaps = 18/329 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 57
+++A LL M + + G S P +N+++ + K G +K + EM I+PD
Sbjct: 179 SQEALELLHMMAD-DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVV 237
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
TY+ + AL + A V+ M ++G V D T++++ Y +G ++A LK+
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNL 175
+ + ++ Y L+ + G +E +I+ S+ R P+ A +Y ++Q
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA--TYRTLLQGYATK 354
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
L D V N++I AYAK+ +++ A + + R+ G +PN +
Sbjct: 355 GALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCY 414
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
D ++G + A+ E+ ID G P+ + + D AE
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQMIDEG------LTPNIIVYTSLIHGLCTCDKWDKAEEL 468
Query: 296 -LEILKKAVDDLGVEVFEPLIRTYAAAGR 323
LE+L + + L F +I ++ GR
Sbjct: 469 ILEMLDRGI-CLNTIFFNSIIDSHCKEGR 496
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 108/252 (42%), Gaps = 11/252 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+ +M + + +++ FNS++ + K G + + M + PD TYN
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A +++ M G V D T+ L + Y + A KE+ +
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVG-VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV--NLKDLPG 180
++ Y ++ T + ++ S+ + +Y ++ L NL D
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD--- 638
Query: 181 AEKCFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ + +++ C T + R N+MIGA K GR++ A++L G P+ +T+ +
Sbjct: 639 --EALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Query: 238 FSDYYLRNGDMK 249
++ + G ++
Sbjct: 697 MAENLIEQGSLE 708
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 144/352 (40%), Gaps = 30/352 (8%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE +M E+ + + + + G EK +I+EM + +PDS TY+ +
Sbjct: 71 AERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIG 130
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A ++ +EMKR+G + D T++ L + + GL E+A E++
Sbjct: 131 YLCNASKVEKAFQLFQEMKRNG-ITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCA 189
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL-----------NMIQV 171
++ Y LI Y +T LS I+ + PN + L Q+
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQI 249
Query: 172 LVNLK----DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
+K D+P + F+ +S ++ ++ K +++ A +L E G
Sbjct: 250 YARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEG 309
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
+PN ++ D + + G + A + K + G P+ T + + ++K
Sbjct: 310 CEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCS------PNVYTYSSLIDKLFKDK 363
Query: 288 DVDGAEGFLEILKKAVDDL---GVEVFEPLIRTYAAAGRTSPVMLRRLKMEK 336
+D A L++L K +++ V ++ ++ G+T L ME+
Sbjct: 364 RLDLA---LKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE 412
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 9/235 (3%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND------IS 73
S M FNSL+ Y ++G ++++M P YN+ + + + D I
Sbjct: 10 SPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIG 69
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
AER EM G V + N G FEKA ++E+ ++ D S Y +
Sbjct: 70 LAERAYNEMLEMG-VVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKV 128
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GC 192
I + + +++++ ++ +Y ++ + + A F E + GC
Sbjct: 129 IGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGC 188
Query: 193 ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
A ++ +I AY K +L A E+ E G PN T+ D + + G+
Sbjct: 189 AP-NVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 111/278 (39%), Gaps = 24/278 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA ++ +M S ++ ++ EK + QEMK + I PD YTY
Sbjct: 104 EKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTL 163
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V I A +EM++DG A + T++ L Y++ +A + + +
Sbjct: 164 LDRFCKVGLIEQARNWFDEMQQDG-CAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-------------------LAFPNTANI 163
++ Y LI + + G + +I+ ++ L PN +
Sbjct: 223 CVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNV--V 280
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+Y ++ L + A + GC I + + +I + K G+L+ A+E+ +
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQI-IYDALIDGFCKVGKLDEAQEVFTK 339
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
G PN T+ D ++ + LA+ L K ++
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLE 377
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 126/320 (39%), Gaps = 26/320 (8%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A ++M++ + + + +L+ Y KT + I + M ++ +P+ TY
Sbjct: 172 LIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYT 231
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLA-------SIYVEAGLFEKAER 113
+ + A ++ MK D D + + ++ L + +
Sbjct: 232 ALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCK 291
Query: 114 ALKELENRNAHRDLS---------AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI- 163
A K E R+ +S Y LI + + G L E ++ + L + N+
Sbjct: 292 AHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM-LGHGCSPNVY 350
Query: 164 SYLNMIQVLVNLKDLPGAEKCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+Y ++I L K L A K K E+ CA ++ + M+ K G+ + A L
Sbjct: 351 TYSSLIDKLFKDKRLDLALKVLTKMLENSCAP-NVVIYTEMVDGLCKVGKTDEAYRLMLM 409
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
+G PN T+ D + + G + ++ L+ + T +G P+ T R + H
Sbjct: 410 MEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQ--LMTSKG----CAPNFITYRVLINH 463
Query: 283 FEQEKDVDGAEGFLEILKKA 302
+D A LE +K+
Sbjct: 464 CCAAGLLDDAHKLLEEMKQT 483
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A L+ M+E + + + +++ + K G ++ ++Q M + P+ TY V
Sbjct: 400 TDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRV 459
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE--AGLFEKAERALKELE 119
+ A + A +++EEMK+ W + +E + F + L EL
Sbjct: 460 LINHCCAAGLLDDAHKLLEEMKQ-----TYWPKHIGMYRKVIEGFSHEFVASLGLLAELS 514
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLS---EVYRIWRSLRLAFPNTANISYLNMIQVL 172
+ L Y+ LI + + G L E++ S A+ NT Y+++I+ L
Sbjct: 515 EDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNT----YVSLIESL 566
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 1/249 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L ++M L +++ +N L++ + G + A++ EM + ++PD +TY++ L+
Sbjct: 72 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
D + + ++G D+T S L + + G AE L+ L N
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTC-SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI Y QTG L + + ++ +I+Y +I L + + A+ E
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + N +I AY + G+LE + + G PN ++ + + +NG
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310
Query: 248 MKLAVDCLE 256
+ AV L+
Sbjct: 311 IPEAVAILD 319
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 107/255 (41%), Gaps = 5/255 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE +L+ + L + + +N+L+ Y +TG E + +MK+ I PD TYN +
Sbjct: 174 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 233
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L I+ A+ ++ EM+ +G V TF+ L Y G EK L E++
Sbjct: 234 GLCKAERITNAQDLLMEMQDNG-VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 292
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ +Y ++ + + G + E I + + PN Y +I V A
Sbjct: 293 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ--VYNAIIDAYVEHGPNDQAF 350
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
++ +S + I N++I + ++ AEE+ P+A ++
Sbjct: 351 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 410
Query: 243 LRNGDMKLAVDCLEK 257
G++ A+D ++
Sbjct: 411 CYRGNIDKALDLQQR 425
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +L +M+E L + + + S++ + K G + AI+ +M ++P++ YN
Sbjct: 277 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 336
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A ++E+MK +G ++ T++ L +AE + L N
Sbjct: 337 IDAYVEHGPNDQAFILVEKMKSNG-ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D +Y LI+ GN+ + + + + + +Y +I L L E
Sbjct: 396 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 455
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERARRR 226
+++ + N+M+ AY+K G AE+L KE ++R
Sbjct: 456 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/234 (17%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + +MK ++ + +N+L+ K ++ EM+ + + P T+N
Sbjct: 207 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 266
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + V+ EM+ +G + + ++ ++ + + + G +A L ++ +++
Sbjct: 267 IDAYGRTGQLEKCFIVLSEMQENG-LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 325
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I Y + G + + + ++ + + ++Y +I+ L N + AE
Sbjct: 326 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 385
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ + D N +I A G ++ A +L++R + G +T+
Sbjct: 386 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 439
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ +A+ALL++M L + + + +L+ + + G+ ++ +I+EM A+ + P+ TY+
Sbjct: 308 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 367
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R L + + A ++++M RD D T++ + + + A R L E+EN
Sbjct: 368 LVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA 426
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ Y +I Q+G + + + Y +I ++ A
Sbjct: 427 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 486
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F + D+ N +I +K GR+E + + + + RG PN T+
Sbjct: 487 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 546
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
YL+NGD++ A +++ +DTG
Sbjct: 547 YLKNGDLESAEQLVQRMLDTG 567
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 149/349 (42%), Gaps = 30/349 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+++M + L + + + L+ Y K+ EK+ + + M +M D+ Y +
Sbjct: 554 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 613
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L++ ++ A RV+ ++++G V D +S+L S + EKA L E+ +
Sbjct: 614 IHNLSSSGNMEAAFRVLSGIEKNGSV-PDVHVYSSLISGLCKTADREKAFGILDEMSKKG 672
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y LI ++G++S ++ S+ + PN ++Y ++I + D+
Sbjct: 673 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC--VTYTSLIDGSCKVGDISN 730
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E + T D V +V+ + G LE A L E RG + ++ D
Sbjct: 731 AFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVD 789
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI----------------RTFMRHFE 284
+ + G M+ + L + GRG VP++ TI T +
Sbjct: 790 GFCKRGKMQETLKLLH--VIMGRG----LVPNALTIENIISGLSEAGKLSEVHTIFVELQ 843
Query: 285 QEKDVDGAEGFLEILKKAVDD--LGVEVFEPLIRTYAAAGRTSPVMLRR 331
Q+ A F + ++ + ++V + +IR + G ++ R
Sbjct: 844 QKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLR 892
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 111/255 (43%), Gaps = 1/255 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A+ +L +M+E G +++ +N L+ ++G E+ ++M+ ++PD +TY
Sbjct: 239 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGAL 298
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+ +++EM + + ++NL ++ G ++A + +KE+
Sbjct: 299 INGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 357
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y L+ + G + + + + I+Y +I+ A
Sbjct: 358 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 417
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E E+ + ++ ++MI + G E A +L E +G PNA + Y
Sbjct: 418 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 477
Query: 243 LRNGDMKLAVDCLEK 257
R G++ LA + +K
Sbjct: 478 CREGNVSLACEIFDK 492
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 19/234 (8%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL+ K G + EM A+ I PD++ Y+V ++ D+ A +IEEM
Sbjct: 715 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 774
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A ++F+NL + + G ++ + L + R + + +I+ + G L
Sbjct: 775 LRGH--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 832
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
SEV+ I+ L+ +A + ++ ++N +P + V + M
Sbjct: 833 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-----------------LDVVDDM 875
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
I + KEG L+ A L++ + A ++ D R G + A++ L++
Sbjct: 876 IRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 929
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 118/260 (45%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++++M + + + +++L+ K G ++ ++++M S PD+ TYN+
Sbjct: 344 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A R++ EM+ G ++ + T+S + ++G EKA L+E+ +
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAG-ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 462
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI+ Y + GN+S I+ + Y ++I L + + +
Sbjct: 463 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 522
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F + + + + +I Y K G LE+AE+L +R G PN + + Y
Sbjct: 523 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 582
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
++ D++ + +D G
Sbjct: 583 FKSDDIEKVSSTFKSMLDQG 602
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 1/249 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L ++M L +++ +N L++ + G + A++ EM + ++PD +TY++ L+
Sbjct: 257 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 316
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
D + + ++G D+T S L + + G AE L+ L N
Sbjct: 317 RNGDSKAMLSLFGKYLKNGVTIGDYTC-SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 375
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI Y QTG L + + ++ +I+Y +I L + + A+ E
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ + N +I AY + G+LE + + G PN ++ + + +NG
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495
Query: 248 MKLAVDCLE 256
+ AV L+
Sbjct: 496 IPEAVAILD 504
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 107/255 (41%), Gaps = 5/255 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE +L+ + L + + +N+L+ Y +TG E + +MK+ I PD TYN +
Sbjct: 359 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 418
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L I+ A+ ++ EM+ +G V TF+ L Y G EK L E++
Sbjct: 419 GLCKAERITNAQDLLMEMQDNG-VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 477
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ +Y ++ + + G + E I + + PN Y +I V A
Sbjct: 478 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ--VYNAIIDAYVEHGPNDQAF 535
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
++ +S + I N++I + ++ AEE+ P+A ++
Sbjct: 536 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 595
Query: 243 LRNGDMKLAVDCLEK 257
G++ A+D ++
Sbjct: 596 CYRGNIDKALDLQQR 610
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK +L +M+E L + + + S++ + K G + AI+ +M ++P++ YN
Sbjct: 462 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 521
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A A ++E+MK +G ++ T++ L +AE + L N
Sbjct: 522 IDAYVEHGPNDQAFILVEKMKSNG-ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D +Y LI+ GN+ + + + + + +Y +I L L E
Sbjct: 581 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 640
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL-KERARRR 226
+++ + N+M+ AY+K G AE+L KE ++R
Sbjct: 641 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/234 (17%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + +MK ++ + +N+L+ K ++ EM+ + + P T+N
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + V+ EM+ +G + + ++ ++ + + + G +A L ++ +++
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENG-LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 510
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I Y + G + + + ++ + + ++Y +I+ L N + AE
Sbjct: 511 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 570
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ + D N +I A G ++ A +L++R + G +T+
Sbjct: 571 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH 624
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 14/289 (4%)
Query: 9 LEKMKELNLGFS------SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
LEKM ++ + S + FN L+ G + + + EM+ + P+ T+
Sbjct: 202 LEKMTQVFVDISNYGSPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTL 261
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L+ + + A R+ E+M + + + + ++ L + G A + +E+ N
Sbjct: 262 IYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSN 321
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI+ + G EV I R + ++Y +I DL A
Sbjct: 322 VKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAH 381
Query: 183 KCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E E GC D+ N +IG KEG+L+ A +L E RRG P+ ++ I D
Sbjct: 382 RVMDEMVEKGCKP-DVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDG 440
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
+K A L++ I G +VP +E+I + QE +++
Sbjct: 441 LCEMMQLKEATSILDEMIFKG------YVPRNESINKLVDRLCQECNME 483
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L E+M N+ S +++L++ K G E++ I++EM + PD+ TYN +
Sbjct: 310 AFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIIN 369
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
ND+ A RV++EM G D +F+ + + G +KA L+++ R
Sbjct: 370 GHCKENDLESAHRVMDEMVEKG-CKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCP 428
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRI 149
D+ +Y+ + + L E I
Sbjct: 429 PDVLSYRIIFDGLCEMMQLKEATSI 453
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+KM++ + + +++L+ L K K +I +K S PD YN +
Sbjct: 39 LQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGK 98
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V + T++S L ++YVE F +A E+ DL+
Sbjct: 99 AKLFREARSLISEMKTAG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLT 157
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ G E +++ +R +SY +++V + + A F+
Sbjct: 158 TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLM 217
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N M+ Y K E A L + + RG +PN+ T+ + + G +
Sbjct: 218 QRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKL 277
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 278 DRAAMLFQKLRSSG 291
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + A +++M++D +V D +SNL +
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIEL 60
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 159
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 61 SRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 120
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
T SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 121 TT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
R+ G +PN ++ Y GD +L
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 206
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 15/238 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM++ + P+S TY+ +
Sbjct: 209 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTII 268
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 269 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 327
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 328 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVI 382
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + D V +++ AY K + A ++ + G +FSD
Sbjct: 383 EVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGC--------VFSD 432
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + +N+++ ++ K + ++I EMK + +MP++ +Y+ +
Sbjct: 69 KAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 128
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V EM R+ + D TT + + +Y + G+ ++A++ +
Sbjct: 129 TMYVENKKFLEALSVFSEM-REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 187
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y L+ +YG E ++R ++ ++Y +M+ + + A
Sbjct: 188 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN 247
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E +S + + +I + K G+L+ A L ++ R G + + ++ Y
Sbjct: 248 LIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYE 307
Query: 244 RNG 246
R G
Sbjct: 308 RAG 310
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 243 EKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 302
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 303 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 357
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ ++I +++N L
Sbjct: 358 EVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGY-FPDS------DVIAIVLNAYGKL 410
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
++ A + E E GC D
Sbjct: 411 QEFDKANDVYMEMQEVGCVFSD 432
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 8/279 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L +MKE L + + +N LM Y++ PE + +++ EM P++ +YN
Sbjct: 395 EEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLGFQPNARSYNCL 454
Query: 63 MRALAAVNDIS-GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A +S AE MK+ G + A +++++L Y +G +EKA A +++
Sbjct: 455 ISAYGRQKKMSEKAEDAFLRMKKGG-IKATSSSYTSLICAYAVSGQYEKAHIAYLDMKRE 513
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L Y L+ ++ + GN ++ W+S+ +++ ++ L A
Sbjct: 514 GLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQA 573
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ N+++ AYAK G+ +L + P++ T+
Sbjct: 574 RDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYA 633
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
Y R D A ++ + G+ VP +++ R +
Sbjct: 634 YARVRDFSRAFYYHKQMVRNGQ------VPDAKSYRKLL 666
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 5/180 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M+EKAE +MK+ + +S + SL+ YA +G EK +MK + P TY
Sbjct: 464 MSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYT 523
Query: 61 VWMRALAAVNDISGAERVIEEMKR--DGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ + E+++E K D +V TF + + GLF +A + E
Sbjct: 524 ALLDIFRRAGN---TEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 580
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
Y L+ Y + G ++ ++ + + +++Y +I ++D
Sbjct: 581 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 640
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 7/253 (2%)
Query: 3 EKAEALLEKM---KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
++AEA+ E + K + F+ ++ +Y K G + + +M I + T+
Sbjct: 229 KEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTF 288
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N M ++S + ++M+R + D ++S L Y +A E+A +E+
Sbjct: 289 NSLMSFETNYKEVSS---IYDQMQRTA-LKPDVVSYSLLIKAYGKARREEEALAVFEEML 344
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ +Y LI + +G + E + +++++R SY M+ VN D+
Sbjct: 345 DAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMD 404
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
GAEK F+ + ++ V ++ Y+K +E + ER R +G +PN +
Sbjct: 405 GAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIM 464
Query: 240 DYYLRNGDMKLAV 252
D + RN D AV
Sbjct: 465 DVHGRNSDFGNAV 477
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 138/328 (42%), Gaps = 15/328 (4%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
FS M F L+T Y K G + +++ M P + M A AE V
Sbjct: 140 FSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAV 199
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHR-DLSAYQFLIT 135
M+ G T+ + +VE +++AE ++L E R + + D + +I
Sbjct: 200 FRRMQTSG-PEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIY 258
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
+Y + G+ ++ +++ + + +++ +++ N K++ + + +
Sbjct: 259 MYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETNYKEVSS---IYDQMQRTALKP 315
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D+ +++I AY K R E A + E G P K++ I D + +G ++ A
Sbjct: 316 DVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVF 375
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
KA+ R + P + T + + D+DGAE F +K+ V V+ L+
Sbjct: 376 -KAMRRHRVE-----PDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLM 429
Query: 316 RTYAAAGRTSPVM--LRRLKMEKVEVSE 341
+ Y+ VM R++M+ VE ++
Sbjct: 430 KGYSKLNNVERVMRVYERMRMQGVEPNQ 457
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 1/213 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
++ ++M+ L + ++ L+ Y K E+ A+ +EM + + P +YN+ + A
Sbjct: 303 SIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAF 362
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A + A V + M+R RV D +++ + YV A + AE+ + ++ +
Sbjct: 363 AISGLVEEAHTVFKAMRRH-RVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPN 421
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y L+ Y + N+ V R++ +R+ Y ++ V D A FK
Sbjct: 422 VVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFK 481
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E E+ D + N+++ E A EL
Sbjct: 482 EMEARGYPADKKAKNILLSLAKTPEEQEEANEL 514
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 92 WTTFSN-----LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
W FS L + Y + G F +AER LK + + + + L+ YG+ +
Sbjct: 137 WWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKA 196
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW---ESGCATYDIRVTNVM 203
++R ++ + P + ++Y +++ V AE F++ + D ++ ++M
Sbjct: 197 EAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMM 256
Query: 204 IGAYAKEGRLENAEELKERARRRG 227
I Y K G A +L + RG
Sbjct: 257 IYMYKKAGDYAQARKLFAQMSERG 280
>gi|356558071|ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Glycine max]
Length = 647
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ ++ I D+ YN AL + IS + E+MK+DG D T++ L S +
Sbjct: 425 LLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGP-PPDIFTYNILISSF 483
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
AG + A + +ELEN + D+ +Y LI G+ G++ E + ++ ++ N
Sbjct: 484 GRAGRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDV 543
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +I+ + A + F E + T ++ N+++ + GR A +L +
Sbjct: 544 VTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAVDLYAK 603
Query: 223 ARRRGADPNAKTWEIF 238
+++G P++ T+ +
Sbjct: 604 LKQQGLTPDSITYAVL 619
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/247 (17%), Positives = 101/247 (40%), Gaps = 4/247 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A AL + M + + +N+++ AK +K + +M + I P+ +TY+V
Sbjct: 282 TDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRMVDKAVLLFSKMVENDIQPNEFTYSV 341
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L A ++ + +++ K+ + ++ + G +A R + N
Sbjct: 342 ILNLLVAEGKLNKLDNIVDISKK----YINKQIYAYFVRTLSKVGHASEAHRLFCNMWNF 397
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ D A ++ G ++E + + T I Y + L LK +
Sbjct: 398 HDKGDKDACMSMLESLCSAGKMTEAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHI 457
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+++ + DI N++I ++ + GR++ A + E P+ ++ +
Sbjct: 458 HDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINC 517
Query: 242 YLRNGDM 248
+NGD+
Sbjct: 518 LGKNGDV 524
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 10/255 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA L KM E ++ + ++ ++ L G K+ I+ ++ I Y Y
Sbjct: 316 MVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGKLNKLDNIV-DISKKYINKQIYAY- 373
Query: 61 VWMRALAAVNDISGAERVIEEM---KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
++R L+ V S A R+ M G A + +L S AG +A L +
Sbjct: 374 -FVRTLSKVGHASEAHRLFCNMWNFHDKGDKDACMSMLESLCS----AGKMTEAIDLLNK 428
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ + D Y + T G+ +S ++ ++ ++ P +Y +I
Sbjct: 429 IHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGR 488
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ A K F+E E+ D+ N +I K G ++ A + + +G +P+ T+
Sbjct: 489 VDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYST 548
Query: 238 FSDYYLRNGDMKLAV 252
+ + + +++A
Sbjct: 549 LIECFGKTDKVEMAC 563
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 110/250 (44%), Gaps = 4/250 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ E MK + + ++ + K+ ++ A+ Q M A P+ YN + ALA
Sbjct: 253 VFEDMKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALA 312
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ A + +M + + + T+S + ++ V G K + + ++ + ++ +
Sbjct: 313 KGRMVDKAVLLFSKMVEND-IQPNEFTYSVILNLLVAEGKLNKLDNIV-DISKKYINKQI 370
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
AY F+ TL + G+ SE +R++ ++ + ++M++ L + + A +
Sbjct: 371 YAY-FVRTL-SKVGHASEAHRLFCNMWNFHDKGDKDACMSMLESLCSAGKMTEAIDLLNK 428
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
T D + N + A + ++ + +L E+ ++ G P+ T+ I + R G
Sbjct: 429 IHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGR 488
Query: 248 MKLAVDCLEK 257
+ +AV E+
Sbjct: 489 VDIAVKFFEE 498
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 7/253 (2%)
Query: 3 EKAEALLEKM---KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
++AEA+ E + K + F+ ++ +Y K G + + +M I + T+
Sbjct: 229 KEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTF 288
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N M ++S + ++M+R + D ++S L Y +A E+A +E+
Sbjct: 289 NSLMSFETDYKEVSN---IYDQMQRTA-LKPDVVSYSLLIKAYGKARREEEALAVFEEML 344
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ +Y LI + +G + E + +++++R SY M+ VN D+
Sbjct: 345 DAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMD 404
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
GAEK F+ + ++ V ++ Y+K +E + ER R +G +PN +
Sbjct: 405 GAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIM 464
Query: 240 DYYLRNGDMKLAV 252
D + RN D AV
Sbjct: 465 DVHGRNSDFGNAV 477
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 138/328 (42%), Gaps = 15/328 (4%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
FS M F L+T Y K G + +++ M P + M A AE V
Sbjct: 140 FSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAV 199
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHR-DLSAYQFLIT 135
M+ G T+ + +VE +++AE ++L E R + + D + +I
Sbjct: 200 FRRMQTSG-PEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIY 258
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY 195
+Y + G+ ++ +++ + + +++ +++ + K++ + + +
Sbjct: 259 MYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETDYKEVSN---IYDQMQRTALKP 315
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D+ +++I AY K R E A + E G P K++ I D + +G ++ A
Sbjct: 316 DVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVF 375
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
KA+ R + P + T + + D+DGAE F +K+ V V+ L+
Sbjct: 376 -KAMRRHRVE-----PDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLM 429
Query: 316 RTYAAAGRTSPVM--LRRLKMEKVEVSE 341
+ Y+ VM R++M+ VE ++
Sbjct: 430 KGYSKLNNVERVMRVYERMRMQGVEPNQ 457
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ ++M+ L + ++ L+ Y K E+ A+ +EM + + P +YN+ + A A
Sbjct: 304 IYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFA 363
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ A V + M+R RV D +++ + YV A + AE+ + ++ ++
Sbjct: 364 ISGLVEEAHTVFKAMRRH-RVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNV 422
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y L+ Y + N+ V R++ +R+ Y ++ V D A FKE
Sbjct: 423 VVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKE 482
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E+ D + N+++ E A EL
Sbjct: 483 MEARGYPADKKAKNILLSLAKTPEEQEEANEL 514
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 92 WTTFSN-----LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
W FS L + Y + G F +AER LK + + + + L+ YG+ +
Sbjct: 137 WWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKA 196
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW---ESGCATYDIRVTNVM 203
++R ++ + P + ++Y +++ V AE F++ + D ++ ++M
Sbjct: 197 EAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMM 256
Query: 204 IGAYAKEGRLENAEELKERARRRG 227
I Y K G A +L + RG
Sbjct: 257 IYMYKKAGDYAQARKLFAQMSERG 280
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 132/354 (37%), Gaps = 43/354 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTY 59
+ + A LL + + L S +L++ G + A+ E A I P + Y
Sbjct: 243 LPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAY 302
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N ++ + + AE+V++EM + G VA D T+S L Y AG +E A LKE+E
Sbjct: 303 NALLKGYVRIGSLKNAEQVLDEMSQCG-VAPDEATYSLLVDAYTRAGRWESARILLKEME 361
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ ++ + G+ + + + R ++ + Y MI L
Sbjct: 362 ADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLG 421
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR--------------- 224
A F + D+ N +I A+ K GR + A EL E R
Sbjct: 422 HAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMI 481
Query: 225 --------------------RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
+G PN T+ D Y R+G K A+DC+E +
Sbjct: 482 NLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAM----KA 537
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
DG K PS + + Q D A ++ +K ++ + V LI +
Sbjct: 538 DGLK--PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF 589
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGA---ERVIEEMKRDGRVAADWTTFSNLA 99
++ ++ +PD +Y+ + +L D A ER++ ++ R+ R+ D FS+L
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDL-RESRLEPDAPLFSDLI 235
Query: 100 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-- 157
S + A L + A L + +A LI+ G G ++E ++ LA
Sbjct: 236 SAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEI 295
Query: 158 -PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
P T +Y +++ V + L AE+ E D ++++ AY + GR E+A
Sbjct: 296 KPRTR--AYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353
Query: 217 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
L + G P++ + + GD + A L + +G
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 9/262 (3%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
E+KA + PD +Y + L + AE + +M+ + V + ++ + Y
Sbjct: 5 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA-YNTMIMGY 63
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL-AFPNTA 161
AG FE A + L+ L R + ++ ++T G+ + E ++ ++ A PN++
Sbjct: 64 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSS 123
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+Y +I +L + A + E E ++ N+M+ K +LE A ++ E
Sbjct: 124 --TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
A +RG +P+ T+ D + G + A EK +D G V + IR F
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH--NANPVVYTSLIRNFFI 239
Query: 282 HFEQEKDVDGAEGFLEILKKAV 303
H +E DG + F E++++
Sbjct: 240 HGRKE---DGHKIFKELIRRGC 258
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 4/237 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A LLE+++E S + FNS++T K ++ ++ + MK + P+S TYN+
Sbjct: 70 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNII 128
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A R+++EM+ + + T + + +A E+A + + R
Sbjct: 129 IDMLCLGGRVEEAYRILDEMEH-ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 187
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ D Y LI G+ G + E YR++ + A N + Y ++I+
Sbjct: 188 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 247
Query: 183 KCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K FKE GC D+ + N + K G +E + E R G P+ +++ I
Sbjct: 248 KIFKELIRRGCKP-DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 110/257 (42%), Gaps = 5/257 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
++A L EKM L+ G ++ P + SL+ + G E I +E+ PD
Sbjct: 208 VDEAYRLFEKM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 265
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N +M + ++ + E+++ G + D ++S L +AG + ++
Sbjct: 266 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLP-DVRSYSILIHGLTKAGQARETSNIFHAMK 324
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ D AY ++ + ++G + + Y I ++ +Y ++ L + L
Sbjct: 325 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 384
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F+E +S ++ + + +I + K GR++ A + E ++G PN TW
Sbjct: 385 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444
Query: 240 DYYLRNGDMKLAVDCLE 256
D ++ ++ A+ C +
Sbjct: 445 DALVKAEEINEALVCFQ 461
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E+ K + + + ++SL+ + K G ++ I++EM + P+ YT+N
Sbjct: 384 DEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSL 443
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL +I+ A + MK + + + T+S L + + KA ++++ +
Sbjct: 444 LDALVKAEEINEALVCFQSMK-EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 502
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYL 166
++ Y +I+ + GN+++ Y ++ + P+ A+ + L
Sbjct: 503 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNAL 548
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 92/240 (38%), Gaps = 3/240 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A +L++M+ +L + + N ++ K E+ I + PD TY
Sbjct: 138 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 197
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + A R+ E+M G A+ +++L + G E + KEL R
Sbjct: 198 LIDGLGKKGQVDEAYRLFEKMLDAGH-NANPVVYTSLIRNFFIHGRKEDGHKIFKELIRR 256
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPG 180
DL+ + + G + + I+ +R ++ ++ SY +I L
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR-SYGFLPDVRSYSILIHGLTKAGQARE 315
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F + D R N ++ + K G++ A E+ E + + P T+ D
Sbjct: 316 TSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVD 375
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 142/330 (43%), Gaps = 18/330 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 57
+++A LL M + + G S P +N+++ + K G +K + EM I+PD
Sbjct: 179 SQEALELLHMMAD-DRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVV 237
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
TY+ + AL + A V+ M ++G V D T++++ Y +G ++A LK+
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNL 175
+ + ++ Y L+ + G +E +I+ S+ R P+ A +Y ++Q
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA--TYRTLLQGYATK 354
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
L D V N++I AYAK+ +++ A + + R+ G +PN +
Sbjct: 355 GALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCY 414
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
D ++G + A+ E+ ID G P+ + + D AE
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQMIDEG------LTPNIIVYTSLIHGLCTCDKWDKAEEL 468
Query: 296 -LEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
LE+L + + L F +I ++ GR
Sbjct: 469 ILEMLDRGI-CLNTIFFNSIIDSHCKEGRV 497
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 108/252 (42%), Gaps = 11/252 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAE L+ +M + + +++ FNS++ + K G + + M + PD TYN
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A +++ M G V D T+ L + Y + A KE+ +
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVG-VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV--NLKDLPG 180
++ Y ++ T + ++ S+ + +Y ++ L NL D
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTD--- 638
Query: 181 AEKCFKEWESGCAT---YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ + +++ C T + R N+MIGA K GR++ A++L G P+ +T+ +
Sbjct: 639 --EALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696
Query: 238 FSDYYLRNGDMK 249
++ + G ++
Sbjct: 697 MAENLIEQGSLE 708
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 149/349 (42%), Gaps = 30/349 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+++M + L + + + L+ Y K+ EK+ + + M +M D+ Y +
Sbjct: 576 ESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGIL 635
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L++ ++ A RV+ ++++G V D +S+L S + EKA L E+ +
Sbjct: 636 IHNLSSSGNMEAAFRVLSGIEKNGSV-PDVHVYSSLISGLCKTADREKAFGILDEMSKKG 694
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y LI ++G++S ++ S+ + PN ++Y ++I + D+
Sbjct: 695 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC--VTYTSLIDGSCKVGDISN 752
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + E + T D V +V+ + G LE A L E RG + ++ D
Sbjct: 753 AFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVD 811
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI----------------RTFMRHFE 284
+ + G M+ + L + GRG VP++ TI T +
Sbjct: 812 GFCKRGKMQETLKLLH--VIMGRG----LVPNALTIENIISGLSEAGKLSEVHTIFVELQ 865
Query: 285 QEKDVDGAEGFLEILKKAVDD--LGVEVFEPLIRTYAAAGRTSPVMLRR 331
Q+ A F + ++ + ++V + +IR + G ++ R
Sbjct: 866 QKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLR 914
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ +A+ALL++M L + + + +L+ + + G+ ++ +I+EM A+ + P+ TY+
Sbjct: 330 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 389
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R L + + A ++++M RD D T++ + + + A R L E+EN
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA 448
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ Y +I Q+G + + + Y +I ++ A
Sbjct: 449 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 508
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F + D+ N +I +K GR+E + + + + RG PN T+
Sbjct: 509 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHG 568
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
YL+NGD++ A +++ +DTG
Sbjct: 569 YLKNGDLESAEQLVQRMLDTG 589
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 111/255 (43%), Gaps = 1/255 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A+ +L +M+E G +++ +N L+ ++G E+ ++M+ ++PD +TY
Sbjct: 261 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGAL 320
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A+ +++EM + + ++NL ++ G ++A + +KE+
Sbjct: 321 INGLCKSRRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 379
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y L+ + G + + + + I+Y +I+ A
Sbjct: 380 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAF 439
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E E+ + ++ ++MI + G E A +L E +G PNA + Y
Sbjct: 440 RLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY 499
Query: 243 LRNGDMKLAVDCLEK 257
R G++ LA + +K
Sbjct: 500 CREGNVSLACEIFDK 514
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 19/234 (8%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL+ K G + EM A+ I PD++ Y+V ++ D+ A +IEEM
Sbjct: 737 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 796
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A ++F+NL + + G ++ + L + R + + +I+ + G L
Sbjct: 797 LRGH--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 854
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
SEV+ I+ L+ +A + ++ ++N +P + V + M
Sbjct: 855 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-----------------LDVVDDM 897
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
I + KEG L+ A L++ + A ++ D R G + A++ L++
Sbjct: 898 IRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 951
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 118/260 (45%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++++M + + + +++L+ K G ++ ++++M S PD+ TYN+
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A R++ EM+ G ++ + T+S + ++G EKA L+E+ +
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAG-ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 484
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI+ Y + GN+S I+ + Y ++I L + + +
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 544
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K F + + + + +I Y K G LE+AE+L +R G PN + + Y
Sbjct: 545 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 604
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
++ D++ + +D G
Sbjct: 605 FKSDDIEKVSSTFKSMLDQG 624
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 5/262 (1%)
Query: 5 AEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
A ALL K++E +G P +++L+ Y K + ++ EM+ ++ TYN
Sbjct: 224 AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYN 283
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + L + A ++M+ G V D T+ L + ++ +A+ L E+
Sbjct: 284 VLIAGLCRSGAVEEAFGFKKDMEDYGLVP-DGFTYGALINGLCKSRRSNEAKALLDEMSC 342
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y LI + + GN E +++ + + A I+Y N+++ L + +
Sbjct: 343 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 402
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A K+ D N++I + + ++A L G PN T+ I
Sbjct: 403 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH 462
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
++G+ + A D LE+ G
Sbjct: 463 GLCQSGEPEKASDLLEEMTTKG 484
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+KM++ + + +++L+ L K K +I +K S PD YN +
Sbjct: 38 LQKMEQDQVPGDLVLYSNLIELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGK 97
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V + T++S L ++Y E F +A E+ DL+
Sbjct: 98 AKLFREARSLISEMKTAG-VMPNTTSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLT 156
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ G E +++ +R +SY +++V + + A F+
Sbjct: 157 TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLM 216
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N MI Y K E A L + + RG +PN+ T+ + + G +
Sbjct: 217 QRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKL 276
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 277 DRAAMLFQKLRSSG 290
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 8/211 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + A +++M++D +V D +SNL +
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIEL 59
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 159
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 60 SRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 119
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
T SY ++ + K A F E D+ N+MI Y + G + A++L
Sbjct: 120 TT--SYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
R+ G +PN ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 205
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS++ +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 208 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 267
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
+ A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 268 SIWGKXGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 326
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 327 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVI 381
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V V++ AY K + A ++
Sbjct: 382 EVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDV 418
>gi|357444861|ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 1430
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 114/269 (42%), Gaps = 42/269 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ K+ EK +++EMK I P +TYN L D+S A +++EM
Sbjct: 464 YNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVMLKEMG 523
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G W + L +KEL + R + A +FL + Q G L
Sbjct: 524 SCGH--GPWIKHTTLL---------------VKELCDHG--RVIEACEFLDNM-TQQGFL 563
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
++ +SY I LVN++++ A K FK+ S D+ NV+
Sbjct: 564 PDI----------------VSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVL 607
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I K R AE+L +RG P+ T+ +F D + +NG++ A+ L + +
Sbjct: 608 IRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDKAMAHLFRMTKEDK 667
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
VPS T T + F +E+ D A
Sbjct: 668 ------VPSVVTYTTLVDGFCKEERPDDA 690
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 124/343 (36%), Gaps = 39/343 (11%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYN 60
+KA L+E+M E + S F L+ + K +K + +M + S PD Y+
Sbjct: 246 VDKAFELVERMGECGMRLSEKTFCVLIHGFVKESRVDKALQLFDKMRREDSFTPDVSLYD 305
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + L D A + EMK G V D + L S + ++
Sbjct: 306 VLIGGLCKNKDTDRAISLFSEMKEFG-VRPDIGILTKLISCFSDSKSMVSRLLEEIPEGE 364
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL----------------------RLAFP 158
+ + Y L+T Y G + E YR+ R + R+ FP
Sbjct: 365 EDEQTLVLIYNALLTCYVNDGLMDEAYRLIRMMIQSKSSTDSDENRMDVFFKTVKRMVFP 424
Query: 159 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 218
N + S + I + L A F + I + N +I + K RLE + E
Sbjct: 425 NITSFSIV--IDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYE 482
Query: 219 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT 278
L + G +P T+ + D+ A L+ + G G W+ + +
Sbjct: 483 LLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVMLK---EMGSCGHGPWIKHTTLL-- 537
Query: 279 FMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
++ V A FL D++ + F P I +Y+AA
Sbjct: 538 -VKELCDHGRVIEACEFL-------DNMTQQGFLPDIVSYSAA 572
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 110/264 (41%), Gaps = 17/264 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE +M + + + +S G EK ++I+EM +PD+ TY+
Sbjct: 387 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 446
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + + A + EEMKR G V AD T++ + + +AGL E+A + E+
Sbjct: 447 KVLNYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL------------ 166
++ Y LI Y + +S ++ ++ PN S L
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 565
Query: 167 --NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
+ + + KD+P + FK+++ ++ ++ + K R+E A +L +
Sbjct: 566 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 625
Query: 225 RRGADPNAKTWEIFSDYYLRNGDM 248
G +PN ++ D + G +
Sbjct: 626 MEGCEPNQIVYDALIDGLCKVGKL 649
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 21/272 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND------ISGAER 77
FNSL+ Y +G ++++M MP YN+ + ++ D + AE+
Sbjct: 334 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEK 393
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
EM G V + S+ AG +EKA ++E+ + D S Y ++
Sbjct: 394 AYSEMLAAG-VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 452
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYD 196
+ + ++ ++ +Y M+ + A K F E E GC T +
Sbjct: 453 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC-TPN 511
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
+ +I AY K ++ A EL E G PN T+ D + + G ++ A E
Sbjct: 512 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 571
Query: 257 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+ G K VP + +F+Q D
Sbjct: 572 RMC------GSKDVPDVDM------YFKQYDD 591
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 110/295 (37%), Gaps = 51/295 (17%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ + K+ E+ ++ M P+ Y+ + L V + A+ V EM
Sbjct: 601 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 660
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A T+S+L Y + + A + L ++ + ++ Y +I + G
Sbjct: 661 EHG-FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 719
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E Y++ + + E GC ++ M
Sbjct: 720 DEAYKLMQMME----------------------------------EKGCQP-NVVTYTAM 744
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I + G++E EL ER +G PN T+ + D+ +NG + +A + LE+ T
Sbjct: 745 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT-- 802
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
W + R + F +E F+E L +D++G + P + Y
Sbjct: 803 ----HWPTHTAGYRKVIEGFNKE--------FIESL-GLLDEIGQDDTAPFLSVY 844
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 136/323 (42%), Gaps = 23/323 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
++A A+ E+MK+ L S + +N ++ +Y K G +KI ++ EM+ + D +T +
Sbjct: 249 KQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCST 308
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A I+ A+ E+K G T++ L ++ +AG++ +A LKE+E+
Sbjct: 309 VISACGREGLINEAKEFFVELKSSG-YEPGTVTYNALLQVFGKAGIYSEALNILKEMEDN 367
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
N D Y L+ Y + G E + ++ + PN ++Y +I
Sbjct: 368 NCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNA--VTYTTVINAYGRAGKEV 425
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + F + +SGC ++ N ++ K+ R E ++ R G PN TW
Sbjct: 426 KALQLFNQMKKSGCVP-NVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTL 484
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ-EKDVDGAEGFLE 297
G K + + G + P +T T + + + ++D A+ + E
Sbjct: 485 LAMCGDKGKHKFVNHVFREMKNCG------FEPGKDTFNTLISAYGRCGSELDAAKMYDE 538
Query: 298 ILKKAVDDLGVEVFEPLIRTYAA 320
++K F P TY A
Sbjct: 539 MMKAG--------FTPCATTYNA 553
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 129/301 (42%), Gaps = 22/301 (7%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +N+L+ + G + + + +EMK P T+N + A A ++ +E
Sbjct: 479 ITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDE 538
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M + G TT++ L + G ++ AE L ++ N+ + +++ ++ Y + G
Sbjct: 539 MMKAGFTPC-ATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGG 597
Query: 142 NLSEVYRIWRSLR--LAFPNTANISYLNMIQVLVNLK--DLPGAEKCFKEWESGCATYDI 197
N+ + RI + + FP+ + L +L N K + G E+ F+E D+
Sbjct: 598 NVRGLERIGKDIYDGQIFPSWVLLRTL----ILANFKCRAVRGMERAFEELMKNGYKPDM 653
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
+ N M+ +AK E A+++ + R G P+ T+ + Y R G+ A + L+
Sbjct: 654 VIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKG 713
Query: 258 AIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRT 317
I + G+ V + I+ F R +G ++ + + ++ P I T
Sbjct: 714 LIKS--GESPDLVSYNTIIKGFCR-----------QGLMQEAIRVMSEMTTRGICPCIFT 760
Query: 318 Y 318
Y
Sbjct: 761 Y 761
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 1/249 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE++L M+ + F+ ++ YAK G+ + I +++ I P +
Sbjct: 567 AESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLIL 626
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + G ER EE+ ++G D F+++ SI+ + ++E+A++ L +
Sbjct: 627 ANFKCRAVRGMERAFEELMKNG-YKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQ 685
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y L+ +Y + G + I + L + + +SY +I+ + A +
Sbjct: 686 PDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRV 745
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E + I N + YA G +E+ ++ PN T++I D Y +
Sbjct: 746 MSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCK 805
Query: 245 NGDMKLAVD 253
+ A+D
Sbjct: 806 ARKYQDAMD 814
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 17/278 (6%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
++ +N+L+ ++ K G + I++EM+ ++ DS TYN + A VI+
Sbjct: 338 TVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVID 397
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
M R G V + T++ + + Y AG KA + +++ ++ Y ++ L G+
Sbjct: 398 TMTRKG-VMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKK 456
Query: 141 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE-----WESGCATY 195
E+ +I +R+ I++ ++ + + F+E +E G T+
Sbjct: 457 SRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTF 516
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
N +I AY + G +A ++ + + G P A T+ + R GD K A
Sbjct: 517 -----NTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAA---- 567
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
E + R G K P+ + + + + +V G E
Sbjct: 568 ESVLLDMRNKGFK--PNETSFSLMLHCYAKGGNVRGLE 603
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 127/325 (39%), Gaps = 17/325 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K LL++M+ L F +++++ + G + E+K+S P + TYN
Sbjct: 285 DKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNAL 344
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ S A +++EM+ D D T++ L + YV AG +E+ + + +
Sbjct: 345 LQVFGKAGIYSEALNILKEME-DNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKG 403
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I YG+ G + +++ ++ + N+ N I L+ K +E
Sbjct: 404 VMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKS-GCVPNVCTYNSILALLGKKS--RSE 460
Query: 183 KCFKEWE----SGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ K +GC R+T N ++ +G+ + + + G +P T+
Sbjct: 461 EMIKILSDMRINGCPPN--RITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNT 518
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
Y R G A ++ + G + P + T + + D AE L
Sbjct: 519 LISAYGRCGSELDAAKMYDEMMKAG------FTPCATTYNALLNALARRGDWKAAESVLL 572
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAG 322
++ F ++ YA G
Sbjct: 573 DMRNKGFKPNETSFSLMLHCYAKGG 597
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 130/312 (41%), Gaps = 7/312 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L++M++ N S+ +N L+ Y + G E+ +I M +MP++ TY + A
Sbjct: 360 ILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYG 419
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
A ++ +MK+ G V + T++++ ++ + E+ + L ++ +
Sbjct: 420 RAGKEVKALQLFNQMKKSGCV-PNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNR 478
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ L+ + G G V ++R ++ ++ +I A K + E
Sbjct: 479 ITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDE 538
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
T N ++ A A+ G + AE + R +G PN ++ + Y + G+
Sbjct: 539 MMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGN 598
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
++ ++ + K I G+ PS +RT + + + V G E E L K
Sbjct: 599 VR-GLERIGKDIYD-----GQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPD 652
Query: 308 VEVFEPLIRTYA 319
+ +F ++ +A
Sbjct: 653 MVIFNSMLSIFA 664
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A+ +L+ ++E L + +NSLM +YA+ G K I++ + S PD +YN
Sbjct: 668 MYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYN 727
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A RV+ EM G + T++ S Y G+F + + + +
Sbjct: 728 TIIKGFCRQGLMQEAIRVMSEMTTRG-ICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQ 786
Query: 121 RNAHRDLSAYQFLITLY 137
+N + Y+ ++ Y
Sbjct: 787 KNCKPNELTYKIIVDGY 803
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 105/270 (38%), Gaps = 9/270 (3%)
Query: 16 NLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
N GF FN+L++ Y + G + EM + P + TYN + ALA D
Sbjct: 506 NCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWK 565
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
AE V+ +M+ G + T+FS + Y + G ER K++ + + L
Sbjct: 566 AAESVLLDMRNKG-FKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTL 624
Query: 134 ITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 193
I + + + R + L + + +M+ + A+K
Sbjct: 625 ILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGL 684
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
D+ N ++ YA+ G AEE+ + + G P+ ++ + R G M+ A+
Sbjct: 685 QPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIR 744
Query: 254 CLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
+ + T RG P T TF+ +
Sbjct: 745 VMSEM--TTRG----ICPCIFTYNTFVSGY 768
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
+ D+R ++ AY++ G+ + A + ER + G P+ T+ + D Y G M + D
Sbjct: 229 SLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVY---GKMGRSWD 285
Query: 254 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 313
+ +D R +G ++ T T + +E ++ A+ F LK + + G +
Sbjct: 286 KILDLLDEMRNEGLQF--DEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNA 343
Query: 314 LIRTYAAAG 322
L++ + AG
Sbjct: 344 LLQVFGKAG 352
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 1/237 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A+ LL M + + + +++LM Y G + I M + P+ Y+YN+
Sbjct: 236 VKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNI 295
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + A ++ EM V D T+++L ++G A + E+ +R
Sbjct: 296 MINGLCKCKRVDEAMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGRITSALNLMNEMHHR 354
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y L+ + NL + ++ ++ +Y +I L L A
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 414
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ F+ D+ VMI KEG + A +K + G PNA T+EI
Sbjct: 415 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 471
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 134/313 (42%), Gaps = 8/313 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +LL++M N+ +N L+ K G+ ++ ++ M I P TY+ M
Sbjct: 204 AFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMD 263
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
V ++ A+++ M + G V + +++ + + + ++A L+E+ ++N
Sbjct: 264 GYCLVGEVQNAKQIFHAMVQMG-VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV 322
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y LI ++G ++ + + ++Y +++ L ++L A
Sbjct: 323 PDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATAL 382
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F + + + +I K GRL+NA+EL + +G + T+ + +
Sbjct: 383 FMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 442
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKKAV 303
G A+ AI + D G +P++ T +R ++ + D AE L E++ K +
Sbjct: 443 EGMFDEAL-----AIKSKMEDNG-CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Query: 304 DDLGVEVFEPLIR 316
L +V + ++
Sbjct: 497 LVLDFKVADVFVQ 509
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 76/203 (37%), Gaps = 1/203 (0%)
Query: 46 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
EM A I PD+ TY + + + GA +++EM + ++ L + +
Sbjct: 175 EMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK-NINPGVYIYNILINALCKE 233
Query: 106 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 165
G ++A+ L + + Y L+ Y G + +I+ ++ N SY
Sbjct: 234 GNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSY 293
Query: 166 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
MI L K + A +E D N +I K GR+ +A L
Sbjct: 294 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 353
Query: 226 RGADPNAKTWEIFSDYYLRNGDM 248
RG + T+ D +N ++
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNL 376
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 1/247 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A + E+M E L +++ +L+ + K G + EM + D YN
Sbjct: 201 QDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNAL 260
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V D+ A ++EEM++DG + D T++ L + G + A +E+ +
Sbjct: 261 VNGFCRVRDMKAANDIVEEMRKDG-LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEG 319
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + G + RI + A N +Y +I D+
Sbjct: 320 VALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGF 379
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K KE ++ I NV++ + G+++NA+ L G PN T+ I D +
Sbjct: 380 KHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGH 439
Query: 243 LRNGDMK 249
++G ++
Sbjct: 440 CKHGKVR 446
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 3/244 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+LM+ K A+ M + I PD YTY +++ L I A + EEM
Sbjct: 152 FNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC 211
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + + L + + G E+ R DL AY L+ + + ++
Sbjct: 212 ERG-LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDM 270
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNV 202
I +R ++Y +I +L A + +E + G A D+ T
Sbjct: 271 KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT-A 329
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+I +K GR +AE + G P+ T+ + D + +NGD+K L++ + G
Sbjct: 330 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 389
Query: 263 RGDG 266
+ G
Sbjct: 390 KNPG 393
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ + + + I++EM+ + PD TY + ++ A + +EM
Sbjct: 257 YNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMS 316
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G VA D T++ L S +AG AER L E+ D + Y +I + + G++
Sbjct: 317 DEG-VALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDV 375
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNV 202
++ + ++ N ++Y ++ +L + A+ + G DI N+
Sbjct: 376 KTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDI-TYNI 434
Query: 203 MIGAYAKEGRLENAEELK 220
++ + K G++ + EELK
Sbjct: 435 LLDGHCKHGKVRDTEELK 452
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 106/240 (44%), Gaps = 1/240 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A AL ++M L +G +N+ + K G+ E ++ +M+A ++ P+ TY+
Sbjct: 321 EDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDMEAKNVKPNVVTYSTL 380
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A ++ E+MK G + D ++ + +IYV+AG + + E+E+
Sbjct: 381 IDGYSKLEKYDEALKLYEKMKSLG-IQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSG 439
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+D Y LI YG+ G L V + + +R + ++Y +I + A
Sbjct: 440 IEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAF 499
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +++ D+ + + I AK G +E A L G PN T+ D +
Sbjct: 500 NVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAF 559
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FNSL++ ++ GH E A+ EM I D YTYN ++ A+ +I A +V+ +M+
Sbjct: 307 FNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDME 366
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
V + T+S L Y + +++A + +++++ D Y ++ +Y + G
Sbjct: 367 AK-NVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKY 425
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E I ++ + + G EK D N +
Sbjct: 426 GE-----------------------IAIVCDEMEDSGIEK------------DTVTYNSL 450
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
I Y K+GRL+ L + RRRG P+ T+ D Y + G
Sbjct: 451 INGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAG 493
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 8/279 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L +MKE L + + +N LM Y++ PE + +++ EM P++ +YN
Sbjct: 395 EEAEGLFAEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLGFQPNARSYNCL 454
Query: 63 MRALAAVNDIS-GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A +S AE MK+ G + A +++++L Y +G +EKA A +++
Sbjct: 455 ISAYGRQKKMSEKAEDAFLRMKKGG-IKATSSSYTSLICAYAVSGQYEKAHIAYLDMKRE 513
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L Y L+ ++ + GN ++ W+S+ +++ ++ L A
Sbjct: 514 GLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQA 573
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E+ N+++ AYAK G+ +L + P++ T+
Sbjct: 574 RDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYA 633
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
Y R D A ++ + G+ VP +++ R +
Sbjct: 634 YARVRDFSRAFYYHKQMVRNGQ------VPDAKSYRKLL 666
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 5/180 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M+EKAE +MK+ + +S + SL+ YA +G EK +MK + P TY
Sbjct: 464 MSEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYT 523
Query: 61 VWMRALAAVNDISGAERVIEEMKR--DGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ + E+++E K D +V TF + + GLF +A + E
Sbjct: 524 ALLDIFRRAGN---TEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 580
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
Y L+ Y + G ++ ++ + + +++Y +I ++D
Sbjct: 581 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 640
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 133/302 (44%), Gaps = 10/302 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L +KM E+ L +++ +N+L+ Y G E+ + EM IMP TYN+
Sbjct: 260 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 319
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + A+ +I+EM++ G + D T++ L + Y G ++A E+ ++
Sbjct: 320 VHALFMEGRMGEADDMIKEMRKKG-IIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
Y LI + + + E ++ + + I + MI ++ A
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE + D N ++ +EG++E A L + + RG P+ ++ Y
Sbjct: 439 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGY 498
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R GD+K A ++ + G + P+ T ++ + ++ D AE E+LK+
Sbjct: 499 GRRGDIKDAFXVRDEMLSIG------FNPTLLTYNALIKCLCKNQEGDLAE---ELLKEM 549
Query: 303 VD 304
V+
Sbjct: 550 VN 551
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 17/303 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA + M+ L + + +N+++ Y+ G+ E I+ M+ I PDSYTY
Sbjct: 190 KKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 249
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A + ++M G V + T++ L Y G E+A E+ +
Sbjct: 250 ISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+S Y L+ G + E + + +R I+Y +L+N G
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY----NILINGYSRCGNA 364
Query: 183 KCFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K + + + I T+V +I ++ R++ A++L E+ +G P+ +
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE-TIRTFMRHFEQEKDVDGAEGFLE 297
D + NG+++ A L K +D K VP E T T M+ +E V+ A L+
Sbjct: 425 IDGHCANGNVERAF-MLLKEMDR------KSVPPDEVTFNTLMQGRCREGKVEEARMLLD 477
Query: 298 ILK 300
+K
Sbjct: 478 EMK 480
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A LL++M ++ + FN+LM + G E+ ++ EMK I PD +YN
Sbjct: 434 VERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNT 493
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ DI A V +EM G T++ L + + AE LKE+ N+
Sbjct: 494 LISGYGRRGDIKDAFXVRDEMLSIG-FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552
Query: 122 NAHRDLSAYQFLITLYGQTGNLSE 145
D S Y LI G L E
Sbjct: 553 GISPDDSTYLSLIEGMGNVDTLVE 576
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 8/165 (4%)
Query: 158 PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAE 217
PN +SY +I + ++ GA + D +I KEGRLE A
Sbjct: 206 PNV--VSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 263
Query: 218 ELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIR 277
L ++ G PNA T+ D Y GD++ A ++ + G +PS T
Sbjct: 264 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG------IMPSVSTYN 317
Query: 278 TFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ E + A+ ++ ++K + LI Y+ G
Sbjct: 318 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362
>gi|356565780|ref|XP_003551115.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 622
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 139/322 (43%), Gaps = 12/322 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTYNV 61
E A+ +++KMKE L S+ +N+L+ Y G P++ ++ M ++ P+ T N+
Sbjct: 217 EDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESIKLLDLMSIEGNVKPNLKTCNM 276
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+RAL + S A V+ +M G + D +F+ +A Y + G + E + E+
Sbjct: 277 LIRALCKMEHTSEAWNVVYKMTTSG-MQPDVVSFNTVAISYAQNGKTVQVEAMILEMRRN 335
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYR-IWRSLRLAFPNTANISYLN-MIQVLVNLKDLP 179
+ +I+ Y + G + E R ++R L N+ LN ++ V+ D
Sbjct: 336 GLKPNDRTCTIIISGYCREGKVREALRFVYRIKDLGL--QPNLIILNSLVNGFVDTMDRD 393
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
G + E D+ + ++ A+++ G LE +E+ + G P+ + I +
Sbjct: 394 GVNEVLNLMEEFYIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDGHAYSILA 453
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y+R +M+ A + L +G P+ T M + +D A + +
Sbjct: 454 KGYVRAQEMEKAEELLTVMTKSGVQ------PNVVIFTTVMSGWCSVGRMDNAMRVFDKM 507
Query: 300 KKAVDDLGVEVFEPLIRTYAAA 321
+ ++ FE LI YA A
Sbjct: 508 GEFGVSPNLKTFETLIWGYAEA 529
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 119/302 (39%), Gaps = 18/302 (5%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA---VNDISGAERVIEE-- 81
+M + K+G P++ I Q + P TY + AL I ++EE
Sbjct: 136 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQ 195
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
MK D R F+ L + + E G E A++ +++++ Y LI YG G
Sbjct: 196 MKPDSRF------FNALVNAFAEFGNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAG 249
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
E ++ + + N+ NM I+ L ++ A + + D+
Sbjct: 250 KPDESIKLLDLMSIEGNVKPNLKTCNMLIRALCKMEHTSEAWNVVYKMTTSGMQPDVVSF 309
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N + +YA+ G+ E + RR G PN +T I Y R G ++ A+ + + D
Sbjct: 310 NTVAISYAQNGKTVQVEAMILEMRRNGLKPNDRTCTIIISGYCREGKVREALRFVYRIKD 369
Query: 261 TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
G P+ + + + F D DG L ++++ V + ++ ++
Sbjct: 370 LGLQ------PNLIILNSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITYSTIMNAWSQ 423
Query: 321 AG 322
AG
Sbjct: 424 AG 425
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +A ++ KM + + FN++ YA+ G ++ A+I EM+ + + P+ T +
Sbjct: 287 TSEAWNVVYKMTTSGMQPDVVSFNTVAISYAQNGKTVQVEAMILEMRRNGLKPNDRTCTI 346
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A R + +K G + + ++L + +V+ + L +E
Sbjct: 347 IISGYCREGKVREALRFVYRIKDLG-LQPNLIILNSLVNGFVDTMDRDGVNEVLNLMEEF 405
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y ++ + Q G L + I+ ++ + +Y + + V +++ A
Sbjct: 406 YIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDGHAYSILAKGYVRAQEMEKA 465
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
E+ ++ + ++ + GR++NA + ++ G PN KT+E
Sbjct: 466 EELLTVMTKSGVQPNVVIFTTVMSGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFE 520
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +K E +L M E ++ S+ +NSLM +Y++ G EK +I+ E+K+S + PD Y+YN
Sbjct: 620 MVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYN 679
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ EMK G V D T++ YV +FE+A ++ L
Sbjct: 680 TVIYAYGRKGQMKEASRLFSEMKCSG-VKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVT 738
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ + + ++ Y + G + E +L +P +
Sbjct: 739 QGCRPNERTFNSILQGYSRHGRMVEAKSFLSNLPKIYPGIS 779
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +L++M+ S + +NSL++ Y K G E+ + QEM+ + PD TY
Sbjct: 307 EEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTL 366
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L V I A EM R+G + + T++ L ++ G F + +L +
Sbjct: 367 ISGLDRVGKIDAALATYSEMVRNG-CSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAG 425
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + L++++GQ G SEV +++ ++ A +Y+++I A
Sbjct: 426 YVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 485
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ +K DI N ++ A A+ GR E AE+L R P+ ++
Sbjct: 486 EIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSY 538
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 127/316 (40%), Gaps = 48/316 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL++ Y++ G ++ I + M + I PD TYN + ALA AE++ EM
Sbjct: 468 YVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMV 527
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEK--------------------------------- 110
D D ++S+L Y A +K
Sbjct: 528 -DRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNL 586
Query: 111 --AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS---Y 165
E+A +EL R D++ ++++YG+ + +V + L L N+ N S Y
Sbjct: 587 PETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEV---LSLMMENSINHSAATY 643
Query: 166 LNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
+++ + L D E E +S D N +I AY ++G+++ A L +
Sbjct: 644 NSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 703
Query: 226 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ 285
G P+ T+ IF Y+ N + A+D + + G P+ T + ++ + +
Sbjct: 704 SGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQG------CRPNERTFNSILQGYSR 757
Query: 286 EKDVDGAEGFLEILKK 301
+ A+ FL L K
Sbjct: 758 HGRMVEAKSFLSNLPK 773
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWM 63
A A+ ++M + + + + +N + Y+K P +++ A++ MK I D YTYN +
Sbjct: 203 AVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLI 262
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +V +EMK G D TF++L +Y +A E+A LK +EN
Sbjct: 263 SCCRRRGLHREAAQVFDEMKAAG-FEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGC 321
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y LI+ Y + G L E + + + ++Y +I L + + A
Sbjct: 322 TPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALA 381
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E +GC+ ++ N +I + G+ + + R G P+ TW +
Sbjct: 382 TYSEMVRNGCSP-NLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVF 440
Query: 243 LRNG 246
+NG
Sbjct: 441 GQNG 444
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 39/241 (16%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV--IEE 81
+ +L++ +++ G A+ Q M + P TYNV A + ++ + E V ++
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMS-VPWKEVVALVDS 245
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
MK DG + D T++ L S GL +A + E++ D + L+ +YG+
Sbjct: 246 MKEDG-IERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKAR 304
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E I VL +++ +GC T + N
Sbjct: 305 KHEEA----------------------IGVLKRMEN------------AGC-TPSVVTYN 329
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+I AY K+G LE A ELK+ RG P+ T+ R G + A+ + +
Sbjct: 330 SLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRN 389
Query: 262 G 262
G
Sbjct: 390 G 390
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 118/282 (41%), Gaps = 7/282 (2%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
KM+E ++ +N L+ L ++G + + + M + P T++ M A
Sbjct: 184 KMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRR 243
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
D + ++EEM+ G + + T++ + AG ++A R +K +E+ D+ Y
Sbjct: 244 DTETVKSLLEEMESLG-LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTY 302
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
LI G L + ++ ++ + ++Y+ M+ + DL ++ + E E+
Sbjct: 303 TVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEA 362
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
D+ +++ A K G ++ A L + R++G PN T+ LR +
Sbjct: 363 DGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDD 422
Query: 251 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
A+D G VP++ T F+ + + D A
Sbjct: 423 ALDLFNNMETLG------VVPTAYTYILFIDFYGKSGRSDKA 458
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 127/336 (37%), Gaps = 13/336 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE ++LLE+M+ L L + + + + + G ++ I++ M+ PD TY V
Sbjct: 245 TETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTV 304
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + A + +MK D T+ + + + G + + E+E
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSH-KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEAD 363
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLP 179
D+ + L+ + GN+ E + + +R PN +Y +I L+ + L
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLH--TYNTLISGLLRVNRLD 421
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A F E+ + I Y K GR + A E E+ + RG PN
Sbjct: 422 DALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASL 481
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
G ++ E + R P S T M+ + + VD A L +
Sbjct: 482 YSLAEMGRLR------EAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDM 535
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLK 333
+ + + V LI T AGR M RLK
Sbjct: 536 SENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLK 571
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 114/301 (37%), Gaps = 42/301 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L M+ L + ++ + + Y K+G +K ++MK I P+ N
Sbjct: 421 DDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNAS 480
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +LA + + A+ + +K +G +A D T++ + Y +AG ++A L ++
Sbjct: 481 LYSLAEMGRLREAKVIFNRLKSNG-LAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ 539
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ LI + G + E ++++ LKD+ A
Sbjct: 540 CEPDIIVINSLINTLYKAGRVDEAWKMF----------------------CRLKDMKLAP 577
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
TY N +I KEG+++ A EL G PN T+ D
Sbjct: 578 TV--------VTY-----NTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCL 624
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+N ++ LA+ L K +P T T + EK V A +KK
Sbjct: 625 CKNDEVDLALKMLYKMTTM------NCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM 678
Query: 303 V 303
+
Sbjct: 679 L 679
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L +MK +N L+ + K+G ++ + ++M SS P++ T+N+
Sbjct: 807 EMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNII 866
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L N + A + ++ G + T+ L +++G E+A+ +E+ +
Sbjct: 867 IANLVKSNSLDKALDLFYDLV-SGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + Y LI +G+TG+++ +++ + SY +++ L + A
Sbjct: 926 CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDAL 985
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
F++ + D N+MI + R+E A L + + RG +P+ T+
Sbjct: 986 HYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTY 1038
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 96/219 (43%), Gaps = 3/219 (1%)
Query: 19 FSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 76
FS P + L+ K+G E+ + +EM P++ YN+ + D++ A
Sbjct: 891 FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTAC 950
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
+ + M R+G + D ++++L EAG + A ++L+ + D AY +I
Sbjct: 951 ELFKRMVREG-IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDG 1009
Query: 137 YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYD 196
G++ + E ++ ++ N +Y ++I L + A K ++E + +
Sbjct: 1010 LGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPN 1069
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ N +I Y+ G ++A + +R G PN T+
Sbjct: 1070 VFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 109 EKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM 168
E A E++N D+ Y L+ +G++G ++E++ ++ + + I++ +
Sbjct: 807 EMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNII 866
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
I LV L A F + SG + ++ K GRLE A+EL E G
Sbjct: 867 IANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGC 926
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
PN + I + + + GD+ A + ++ + G P ++ + + +
Sbjct: 927 RPNNAIYNILINGFGKTGDVNTACELFKRMVREG------IRPDLKSYTSLVGCLCEAGR 980
Query: 289 VDGAEGFLEILKKA 302
VD A + E LK+
Sbjct: 981 VDDALHYFEKLKQT 994
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 6/250 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++KA EKMK + + + N+ + A+ G + I +K++ + PDS TYN+
Sbjct: 455 SDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNM 514
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M+ + + A ++ +M + + D ++L + +AG ++A + L++
Sbjct: 515 MMKCYSKAGQVDEAIELLSDMSEN-QCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDM 573
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+ Y LI G+ G + ++ S+ PNT I++ ++ L ++
Sbjct: 574 KLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT--ITFNTILDCLCKNDEVD 631
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A K + + D+ N +I E R+ +A L + ++ P+ T
Sbjct: 632 LALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLL 690
Query: 240 DYYLRNGDMK 249
++NG M+
Sbjct: 691 PGVVKNGLME 700
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 92/222 (41%), Gaps = 3/222 (1%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
I+ K + P +YN + V++ A + EMK G A D T++ L
Sbjct: 776 VFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG-CAPDVFTYNLLLDA 834
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
+ ++G + +++ + + + +I ++ +L + ++ L +
Sbjct: 835 HGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPT 894
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELK 220
+Y ++ L+ L A++ F+E + GC + + N++I + K G + A EL
Sbjct: 895 PCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNN-AIYNILINGFGKTGDVNTACELF 953
Query: 221 ERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+R R G P+ K++ G + A+ EK TG
Sbjct: 954 KRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 38/167 (22%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A EK+K+ L S+ +N ++ ++ E+ + EM++ I PD +TYN
Sbjct: 981 VDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNS 1040
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L AG+ E+A + +EL+
Sbjct: 1041 LILNLGV------------------------------------AGMVEQAGKLYEELQFI 1064
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYL 166
++ Y LI Y +GN Y +++ + + PNT + L
Sbjct: 1065 GLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 39/286 (13%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTG--HPEKIPAIIQEMKASSIMPDSYTYNV 61
KA+ L++ M++ + FN+L+ K+G P ++ ++ S + PD+ TYN
Sbjct: 243 KAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNT 302
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-- 119
+ A + +++ GA +V E+M+ R D T++ + S+Y GL +AER ELE
Sbjct: 303 LLSACSRDSNLDGAVKVFEDMEAH-RCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK 361
Query: 120 ------------------NRNAH---------------RDLSAYQFLITLYGQTGNLSEV 146
RN +D Y +I +YG+ G L
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 147 YRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++++ ++ L+ N I+Y +I L A E ++ + +I
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
YAK G+ E AE+ R G P+ + + D LR + + A
Sbjct: 482 GYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 149/349 (42%), Gaps = 12/349 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMP-FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A ++ + + F+ P + ++ Y K +K +++ ++ S PD T+N
Sbjct: 733 ETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNS 792
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A A A + M RDG + L ++ V+ G E+ ++EL++
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVD-GRLEELYVVVEELQDM 851
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
S+ ++ + + GN+ EV +I+ S++ A Y MI++L K + A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E E E ++ + N M+ Y + ++ +R + G +P+ T+
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILK 300
Y R+ + +++ + G P +T ++ + F ++K ++ AE F E+L
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLD------PKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
K + L + +++ +G S +L+ +K +E + A+ LL
Sbjct: 1026 KGL-KLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K + +++KE L +N+L+ +Y + PE+ ++Q+M+ + P TY
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + AE++ EE+ G + D + + + I ++G KAE+ L+ ++N
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
L+ L+ Y +GN E ++ +L+ + Y ++I + KD
Sbjct: 1063 IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM--KLAVDC 254
++V N M+G Y++ G+ A+EL + R+RG P+ ++ + L++G + LAV+
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 255 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 314
L+ ++G P + T T + ++ ++DGA K +D+ +P
Sbjct: 285 LDMVRNSG------LRPDAITYNTLLSACSRDSNLDGA-------VKVFEDMEAHRCQPD 331
Query: 315 IRTYAA 320
+ TY A
Sbjct: 332 LWTYNA 337
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 14 ELNL-GF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
EL L GF ++ +NSL+ +A+ + EK+ + Q+M+ D TYN +
Sbjct: 357 ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQG 416
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
+ A ++ ++MK D T++ L +A +A + E+ + L Y
Sbjct: 417 QLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTY 476
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
LI Y + G E + + + N++Y M+ VL+ + A +++ S
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEE 218
T + +MI KE R ++ ++
Sbjct: 537 DGHTPSYTLYELMILGLMKENRSDDIQK 564
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL+ MK + + + LM Y+ +G+P++ ++ +K + + + Y+ +
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVI 1109
Query: 64 RALAAVNDI-SGAERVIEEMKRDGRVAAD---WTTFSNLASIYVE 104
A D SG ER++ EMK++G + D WT F AS E
Sbjct: 1110 DAYLRSKDYNSGIERLL-EMKKEG-LEPDHRIWTCFVRAASFSKE 1152
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 39/286 (13%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTG--HPEKIPAIIQEMKASSIMPDSYTYNV 61
KA+ L++ M++ + FN+L+ K+G P ++ ++ S + PD+ TYN
Sbjct: 243 KAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNT 302
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE-- 119
+ A + +++ GA +V E+M+ R D T++ + S+Y GL +AER ELE
Sbjct: 303 LLSACSRDSNLDGAVKVFEDMEAH-RCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK 361
Query: 120 ------------------NRNAH---------------RDLSAYQFLITLYGQTGNLSEV 146
RN +D Y +I +YG+ G L
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLA 421
Query: 147 YRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++++ ++ L+ N I+Y +I L A E ++ + +I
Sbjct: 422 LQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALIC 481
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
YAK G+ E AE+ R G P+ + + D LR + + A
Sbjct: 482 GYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 149/349 (42%), Gaps = 12/349 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMP-FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A ++ + + F+ P + ++ Y K +K +++ ++ S PD T+N
Sbjct: 733 ETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNS 792
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A A A + M RDG + L ++ V+ G E+ ++EL++
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVD-GRLEELYVVVEELQDM 851
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
S+ ++ + + GN+ EV +I+ S++ A Y MI++L K + A
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
E E E ++ + N M+ Y + ++ +R + G +P+ T+
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILK 300
Y R+ + +++ + G P +T ++ + F ++K ++ AE F E+L
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLD------PKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKLL 347
K + L + +++ +G S +L+ +K +E + A+ LL
Sbjct: 1026 KGL-KLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+K + +++KE L +N+L+ +Y + PE+ ++Q+M+ + P TY
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + AE++ EE+ G + D + + + I ++G KAE+ L+ ++N
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
L+ L+ Y +GN E ++ +L+ + Y ++I + KD
Sbjct: 1063 IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM--KLAVDC 254
++V N M+G Y++ G+ A+EL + R+RG P+ ++ + L++G + LAV+
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 255 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 314
L D R G + P + T T + ++ ++DGA K +D+ +P
Sbjct: 285 L----DMVRNSGLR--PDAITYNTLLSACSRDSNLDGA-------VKVFEDMEAHRCQPD 331
Query: 315 IRTYAA 320
+ TY A
Sbjct: 332 LWTYNA 337
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 14 ELNL-GF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
EL L GF ++ +NSL+ +A+ + EK+ + Q+M+ D TYN +
Sbjct: 357 ELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQG 416
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
+ A ++ ++MK D T++ L +A +A + E+ + L Y
Sbjct: 417 QLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTY 476
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
LI Y + G E + + + N++Y M+ VL+ + A +++ S
Sbjct: 477 SALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEE 218
T + +MI KE R ++ ++
Sbjct: 537 DGHTPSYTLYELMILGLMKENRSDDIQK 564
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE LL+ MK + + + LM Y+ +G+P++ ++ +K + + + Y+ +
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVI 1109
Query: 64 RALAAVNDI-SGAERVIEEMKRDGRVAAD---WTTFSNLASIYVE 104
A D SG ER++ EMK++G + D WT F AS E
Sbjct: 1110 DAYLRSKDYNSGIERLL-EMKKEG-LEPDHRIWTCFVRAASFSKE 1152
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 149/375 (39%), Gaps = 47/375 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA L +M + ++ +N+L+ Y+ TG ++ + +EM+ SI+PD T ++
Sbjct: 274 DKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSML 333
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M +L I A V + M G+ +
Sbjct: 334 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 393
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
A D+ TF+ L Y G+ +KA E+ + D+ Y+ +I + G + +
Sbjct: 394 APDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAME 453
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ + +Y +IQ L A++ E + DI + +I
Sbjct: 454 KFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 513
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K GR+ +A+ + + G P+A + + D Y G M+ A+ + + G
Sbjct: 514 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG------ 567
Query: 269 WVPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV 327
P+ T + + + +D G F E+L++ + + ++ +I AGRT P
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTI-LYSIIIDGLFEAGRTVPA 626
Query: 328 MLRRLKMEKVEVSEA 342
KM+ E++E+
Sbjct: 627 -----KMKFHEMTES 636
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 15/267 (5%)
Query: 4 KAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A+ LL M E S + +N+++ + K G K + +EM I PD TYN
Sbjct: 203 QADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS 262
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + AE + +M + +W T++NL Y G +++A R KE+
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVNKRVLPNNW-TYNNLIYGYSSTGQWKEAVRVFKEMRRH 321
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------VLVNL 175
+ D+ L+ + G + E ++ ++ + N SY M+ LV++
Sbjct: 322 SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDM 381
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
DL F D NV+I AYA G L+ A + R G P+ T+
Sbjct: 382 TDL------FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 435
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTG 262
R G M A++ + ID G
Sbjct: 436 RTVIAALCRIGKMDDAMEKFNQMIDQG 462
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 117/284 (41%), Gaps = 18/284 (6%)
Query: 38 EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAA-DWTTFS 96
E + ++ +PD ++Y++ +++L A+ ++ M G V + + ++
Sbjct: 167 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 226
Query: 97 NLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--R 154
+ + + G KA KE+ R DL Y ++ + + + R + +
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 214
PN N +Y N+I + A + FKE D+ ++++G+ K G+++
Sbjct: 287 RVLPN--NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 344
Query: 215 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 274
A ++ + +G +P+ ++ I + Y G + VD + D GDG P
Sbjct: 345 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL---VD-MTDLFDLMLGDG--IAPDFY 398
Query: 275 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
T ++ + +D A I+ + D GV +P + TY
Sbjct: 399 TFNVLIKAYANCGMLDKA----MIIFNEMRDHGV---KPDVVTY 435
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 13/235 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + + + L ++ +N LM Y G EK + M ++ I P+ Y +
Sbjct: 521 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 580
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ I + EM + G + +S + EAG A+ E+
Sbjct: 581 GYCKIGRIDEGLSLFREMLQRG-IKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEK 183
D+ Y ++ + E +++ LR A NI LN MI + + + A+
Sbjct: 640 MDICTYNIVLRGLFKNRCFDEAIFLFKELR-AMNVKINIITLNTMIDGMFQTRRVEEAKD 698
Query: 184 CFKEWE-----SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
F TY I +TN++ KEG +E AE++ + G +PN++
Sbjct: 699 LFASISRSRLVPSVVTYSIMITNLI-----KEGLVEEAEDMFSSMQNAGCEPNSR 748
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/240 (16%), Positives = 83/240 (34%), Gaps = 36/240 (15%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + +M++ + + + +++ + G + +M + PD Y YN
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A+ +I E+ +G + D FS++ + + G A+ N
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNG-MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 530
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H D Y L+ Y G + + R++ ++ A + Y
Sbjct: 531 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY--------------- 575
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ Y K GR++ L +RG P+ + I D
Sbjct: 576 --------------------GTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 615
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 108/293 (36%), Gaps = 7/293 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ L+ ++ + + F+S++ K G I + PD+ YN+ M
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V + A RV + M G + + + L + Y + G ++ +E+ R
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAG-IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGI 603
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y +I + G + + + +Y +++ L + A
Sbjct: 604 KPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 663
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
FKE + +I N MI + R+E A++L R P+ T+ I +
Sbjct: 664 LFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLI 723
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ G ++ A D + G P+S + +R ++ ++ A +L
Sbjct: 724 KEGLVEEAEDMFSSMQNAG------CEPNSRLLNHVVRELLKKNEIVRAGAYL 770
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 110/264 (41%), Gaps = 17/264 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE +M + + + +S G EK ++I+EM +PD+ TY+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + + A + EEMKR G V AD T++ + + +AGL E+A + E+
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL------------ 166
++ Y LI Y + +S ++ ++ PN S L
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 167 --NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
+ + + KD+P + FK+++ ++ ++ + K R+E A +L +
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 225 RRGADPNAKTWEIFSDYYLRNGDM 248
G +PN ++ D + G +
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKL 690
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 21/272 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND------ISGAER 77
FNSL+ Y +G ++++M MP YN+ + ++ D + AE+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
EM G V + S+ AG +EKA ++E+ + D S Y ++
Sbjct: 435 AYSEMLAAG-VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYD 196
+ + ++ ++ +Y M+ + A K F E E GC T +
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC-TPN 552
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
+ +I AY K ++ A EL E G PN T+ D + + G ++ A E
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 257 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+ G K VP + +F+Q D
Sbjct: 613 RMC------GSKDVPDVDM------YFKQYDD 632
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 110/295 (37%), Gaps = 51/295 (17%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ + K+ E+ ++ M P+ Y+ + L V + A+ V EM
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A T+S+L Y + + A + L ++ + ++ Y +I + G
Sbjct: 702 EHG-FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E Y++ + + E GC ++ M
Sbjct: 761 DEAYKLMQMME----------------------------------EKGCQP-NVVTYTAM 785
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I + G++E EL ER +G PN T+ + D+ +NG + +A + LE+ T
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT-- 843
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
W + R + F +E F+E L +D++G + P + Y
Sbjct: 844 ----HWPTHTAGYRKVIEGFNKE--------FIESL-GLLDEIGQDDTAPFLSVY 885
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 121/275 (44%), Gaps = 11/275 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ K G + + ++++++ S+ PD Y + L + A + EM
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G ++ + T++ L + G ++A L E++ +N + D+ + LI G+ G +
Sbjct: 261 VKG-ISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKI 319
Query: 144 SEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E ++ ++ FPN ++Y ++I L L A K+ + D+
Sbjct: 320 DEAISLFEEMKHKNMFPNI--VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYT 377
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+++ A K GRLENA++ + +G N +T+ + + + G +D K
Sbjct: 378 ILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM--- 434
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+G +P + T +T + ++ + D AE FL
Sbjct: 435 ---EGKGCMPDAITFKTIICALFEKDENDKAEKFL 466
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 119/311 (38%), Gaps = 7/311 (2%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N L+ + H ++ + PD+ T N ++ L +I A +++
Sbjct: 132 NILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVA 191
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G D ++ L + +AG + R L++LE + D+ Y +I + +
Sbjct: 192 QG-FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVG 250
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
+ ++ + + + +Y +I + +L A E + D+ N++I
Sbjct: 251 DACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 310
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
A KEG+++ A L E + + PN T+ D +N ++ A+ +K + G
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG-- 368
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
P + + + ++ A+ F + L L V + +I AG
Sbjct: 369 ----IQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 424
Query: 325 SPVMLRRLKME 335
VM + KME
Sbjct: 425 GDVMDLKSKME 435
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L E+MK N+ + + + SL+ K H E+ A+ ++MK I PD Y+Y +
Sbjct: 320 DEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTIL 379
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + A++ + + G + T++ + + +AGLF ++E +
Sbjct: 380 LDALCKGGRLENAKQFFQHLLVKG-YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKG 438
Query: 123 AHRDLSAYQFLIT 135
D ++ +I
Sbjct: 439 CMPDAITFKTIIC 451
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +LL +MK N+ FN L+ K G ++ ++ +EMK ++ P+ TY
Sbjct: 285 KEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSL 344
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + + A + ++MK G + D +++ L + G E A++ + L +
Sbjct: 345 IDGLCKNHHLERAIALCKKMKEQG-IQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKG 403
Query: 123 AHRDLSAYQFLITLYGQTGNLSEV 146
H ++ Y +I + G +V
Sbjct: 404 YHLNVRTYNVMINGLCKAGLFGDV 427
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 110/264 (41%), Gaps = 17/264 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE +M + + + +S G EK ++I+EM +PD+ TY+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + + A + EEMKR G V AD T++ + + +AGL E+A + E+
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL------------ 166
++ Y LI Y + +S ++ ++ PN S L
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 167 --NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
+ + + KD+P + FK+++ ++ ++ + K R+E A +L +
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 225 RRGADPNAKTWEIFSDYYLRNGDM 248
G +PN ++ D + G +
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKL 690
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 21/272 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND------ISGAER 77
FNSL+ Y +G ++++M MP YN+ + ++ D + AE+
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
EM G V + S+ AG +EKA ++E+ + D S Y ++
Sbjct: 435 AYSEMLAAG-VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 138 GQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYD 196
+ + ++ ++ +Y M+ + A K F E E GC T +
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC-TPN 552
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLE 256
+ +I AY K ++ A EL E G PN T+ D + + G ++ A E
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 257 KAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+ G K VP + +F+Q D
Sbjct: 613 RMC------GSKDVPDVDM------YFKQYDD 632
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 110/295 (37%), Gaps = 51/295 (17%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +L+ + K+ E+ ++ M P+ Y+ + L V + A+ V EM
Sbjct: 642 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G A T+S+L Y + + A + L ++ + ++ Y +I + G
Sbjct: 702 EHG-FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E Y++ + + E GC ++ M
Sbjct: 761 DEAYKLMQMME----------------------------------EKGCQP-NVVTYTAM 785
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I + G++E EL ER +G PN T+ + D+ +NG + +A + LE+ T
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT-- 843
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
W + R + F +E F+E L +D++G + P + Y
Sbjct: 844 ----HWPTHTAGYRKVIEGFNKE--------FIESL-GLLDEIGQDDTAPFLSVY 885
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 3/264 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +A + E M E + + +++LM Y ++ + M P YN
Sbjct: 296 MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYN 355
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + ++ A+ ++ EM D + D T+S L + +AG + A++ KE+ +
Sbjct: 356 ILINGHCKSRRLNEAKTLLSEM-YDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS 414
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y L+ + G+L E +R+ ++++ + Y +IQ + N L
Sbjct: 415 YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEA 474
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F + VMI KEG A E+ + G PN+ T+ +
Sbjct: 475 ARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQ 534
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRG 264
+LRNGD AV +E+ + GRG
Sbjct: 535 GFLRNGDPSNAVRLIEEMV--GRG 556
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/319 (17%), Positives = 123/319 (38%), Gaps = 7/319 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L +++ ++ S + + +++ K GH ++++M+ PD YN +
Sbjct: 160 AVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVID 219
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+L + A EM G + + T+S++ + G +A K++ RN
Sbjct: 220 SLCKDRRANEAMYFFSEMVDQG-IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ + L+ + G + E R++ + +Y ++ + A+K
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F +RV N++I + K RL A+ L R P+ T+ + +
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
G ++A ++ G +P S T + + +D A L+ ++++
Sbjct: 399 AGRPQVAQKLFKEMCSYG------LLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI 452
Query: 305 DLGVEVFEPLIRTYAAAGR 323
+ + ++ LI+ G+
Sbjct: 453 EPHICIYNILIQGMCNFGK 471
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 98/245 (40%), Gaps = 50/245 (20%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+A+ LL +M + +L ++ +++LM + + G P+ + +EM + ++PDS TY++
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + G ++A R LK ++
Sbjct: 428 LDGLC------------------------------------KHGHLDEAFRLLKAMQESK 451
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI G L ++ +L + + ++Y MI L LK+ E
Sbjct: 452 IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGL--LKEGLSNE 509
Query: 183 KC--FKEW-ESGC----ATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
C F++ +GC TY NV I + + G NA L E RG ++ T+
Sbjct: 510 ACEMFRKMVVNGCLPNSCTY-----NVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTF 564
Query: 236 EIFSD 240
++ D
Sbjct: 565 QMLLD 569
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 124/349 (35%), Gaps = 50/349 (14%)
Query: 17 LGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN-- 70
LG +P FN L+ K H + ++ ++M S+I P+ YT + + L N
Sbjct: 61 LGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRD 120
Query: 71 -----------------------------------DISGAERVIEEMKRDGRVAADWTTF 95
I A ++ +E+ + G A T+
Sbjct: 121 HVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG-FAPSLITY 179
Query: 96 SNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE-VYRIWRSLR 154
+ + + G A + LK++E + D+ AY +I + +E +Y +
Sbjct: 180 TTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVD 239
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLE 214
P ++Y +++ NL L A FK+ + +++ KEG +
Sbjct: 240 QGIPPNV-VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298
Query: 215 NAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSE 274
A + E G +P+A T+ D Y M A +K D G G + PS
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEA----QKLFDIMVGKG--FAPSVR 352
Query: 275 TIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ + + ++ A+ L + + L++ + AGR
Sbjct: 353 VYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
A +EM+ S I P+SYT N+ + A + + A V EEM G + + +++ L +
Sbjct: 224 AFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMG-FSPNVASYNTLIAG 282
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
Y GL A + +E D+ + L+ + + G L E +++ ++ +
Sbjct: 283 YCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPT 342
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
++Y +I + + F+E DI N +I KEG+ + A L
Sbjct: 343 TVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVR 402
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMR 281
+G PNA T+ + A + I + + P +T R +
Sbjct: 403 ELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSS------FTPCDQTFRMLLS 456
Query: 282 HFEQEKDVDGAEGFLE 297
F + +D DGA LE
Sbjct: 457 TFCENEDYDGAVQLLE 472
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+L+ + K G ++ + EMK S+ P + TYN+ + + + R+ EEM
Sbjct: 311 FNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMS 370
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT--G 141
R +V AD T++ L + G +KA ++EL+ + + S + LI YGQ
Sbjct: 371 R-FQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI--YGQCVQK 427
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
++I++S+ + + ++ ++ +D GA + +E + D+
Sbjct: 428 QSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLY 487
Query: 202 VMIGAYAKEGRLENAEEL 219
+ + G+++ A L
Sbjct: 488 ELCAGLGQCGKVKTAMML 505
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 3/166 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA + E+M + + +N+L+ Y G + M+ + + PD T+N
Sbjct: 255 DKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTL 314
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V + A ++ EMK ++ T++ L + Y +AG E R +E+
Sbjct: 315 VNGFCKVGKLQEASKLFGEMK-GMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQ 373
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL 166
D+ Y LI + G + + R L + PN + S L
Sbjct: 374 VKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSAL 419
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L +MK ++L +++ +N L+ Y+K G+ E + +EM + D TYN
Sbjct: 325 QEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNAL 384
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
+ L A ++ E+ G V + +TFS L IY + + +++ERA +
Sbjct: 385 ILGLCKEGKTKKAAYLVRELDEKGLV-PNASTFSAL--IYGQC-VQKQSERAFQ 434
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + L S + FN+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 144 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 203
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + TF+ L + ++G + A K++ +++
Sbjct: 204 GLCKESKMDDANELFDEMLDKGLV-PNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLS 262
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A +
Sbjct: 263 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEH 322
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I +EGR +AE++ G P+ T+ + + + +
Sbjct: 323 RKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCK 382
Query: 245 NGDM 248
GD+
Sbjct: 383 KGDV 386
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M + L + + F +L+ + K+G + I ++M + S+ PD TYN
Sbjct: 212 DDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTL 271
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM G + D T++ L + G E A K + N
Sbjct: 272 IYGLCKKGDLKQAHDLIDEMSMKG-LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEN 330
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G YL+ AE
Sbjct: 331 IRLDDVAYTALISGLCQEGR----------------------YLD-------------AE 355
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E S D ++I + K+G + +L + +R G P+ T+ +
Sbjct: 356 KVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 411
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + G + +F+ L + Y+ G ++ R
Sbjct: 126 YFFNILMHRFCKEGDIRVAQSVFNAITKWG-LRPSVVSFNTLMNGYIRLGDLDEGFRLKS 184
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
+ D+ Y LI + + + ++ + + PN +++ +I
Sbjct: 185 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPN--GVTFTTLIDGHCK 242
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ A +L + +G P+ T
Sbjct: 243 SGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 302
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GD++ A +
Sbjct: 303 YTTLIDGCCKEGDLETAFE 321
>gi|168056841|ref|XP_001780426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695174|dbj|BAD67152.1| PpPPR_38 [Physcomitrella patens]
gi|162668102|gb|EDQ54716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+T+ +LE MK + S+ +N+L+ +++K PEK A++Q M+A D TY
Sbjct: 299 LTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYT 358
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
M A + AE ++ EMKR G + ++ L S Y AG AER L+ ++N
Sbjct: 359 SVMEAYSRNKQPLMAESMMGEMKRAG-IQPGPVSYGVLISAYCRAGRLGDAERILRAMQN 417
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNTANISYLNMIQV 171
+ Y +I+ Y S+ R++++++ P+ A Y+ M Q+
Sbjct: 418 AKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAAEDCYIRMQQL 470
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 24/243 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L M ++ + P+ +L+ Y K G + + I++ MKAS + + YN
Sbjct: 267 EEAEKTLSDMLDVGI-VDDRPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTL 325
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A V++ M+ DG D T++++ Y AE + E++
Sbjct: 326 INIHSKAEAPEKARAVLQLMQADG-CQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAG 384
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+Y LI+ Y + G L + RI R+++ A Y MI + K AE
Sbjct: 385 IQPGPVSYGVLISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAE 444
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI----F 238
+ F+ + C R + AE+ R ++ G PNA T++I +
Sbjct: 445 RMFQTMQD-CGL-----------------RPDAAEDCYIRMQQLGCKPNAVTYKILLKAY 486
Query: 239 SDY 241
+DY
Sbjct: 487 TDY 489
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 86/216 (39%), Gaps = 2/216 (0%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L++ Y G P + +Q +A + PD+ Y + A A AE+ + +M G
Sbjct: 221 LISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVG 280
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
V D ++ L + Y +AGL + + L+ ++ + Y LI ++ + +
Sbjct: 281 IV--DDRPYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKA 338
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
+ + ++ I+Y ++++ K AE E + V+I A
Sbjct: 339 RAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISA 398
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
Y + GRL +AE + + P + + + Y
Sbjct: 399 YCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGY 434
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 102/274 (37%), Gaps = 42/274 (15%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
LE +LN S +NS + K G I + + + + PD +Y ++
Sbjct: 136 LEDDSQLN---SVKDYNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGK 192
Query: 69 VNDISGAERVIEEMKRDGRVAADW-------TTFSN------------------------ 97
+ + V M+R+ R D +T+ N
Sbjct: 193 LKSYNKVTDVFSRMQRN-RCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAI 251
Query: 98 ----LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
L Y + GL+E+AE+ L ++ + D Y L+ YG+ G V +I ++
Sbjct: 252 AYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD-RPYAALVAAYGKAGLTDNVNKILETM 310
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGR 212
+ + + Y +I + + A + ++ GC +I T+VM AY++ +
Sbjct: 311 KASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVM-EAYSRNKQ 369
Query: 213 LENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
AE + +R G P ++ + Y R G
Sbjct: 370 PLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAG 403
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S I+PD YN
Sbjct: 24 LFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKAISIFSRLKRSGIVPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V D ++S L ++YVE F +A E+
Sbjct: 84 SMINVFGKAKLFREARSLISEMRMVG-VVPDTVSYSTLLTMYVENQKFLEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ E +++ S+R +SY +++V + +
Sbjct: 143 IKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + RG +PNA T+
Sbjct: 203 AIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAMLFQKLRSSG 284
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +N++M +Y KT EK +IQEM + I P++ TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSG-VEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + M+ + K P
Sbjct: 321 IPRDTA-----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMVDLFSKYKKYPNVV 375
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F++ D V +++ AY K + A ++
Sbjct: 376 EVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDV 412
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 4/197 (2%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
P YTY+ + A +++M++D RV D +SNL + + + KA
Sbjct: 7 PXRYTYSTLITHFGKEGLFDDALSWLQKMEQD-RVPGDLVLYSNLIELSRKLYDYSKAIS 65
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
L+ DL AY +I ++G+ E + +R+ +SY ++ + V
Sbjct: 66 IFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYV 125
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+ A F E D+ N+MI Y + + A++L R+ G +PN
Sbjct: 126 ENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVV 185
Query: 234 TWEIFSDYYLRNGDMKL 250
++ Y GD +L
Sbjct: 186 SYNTLLRVY---GDAEL 199
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/243 (18%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + + +NS++ ++ K + ++I EM+ ++PD+ +Y+ +
Sbjct: 62 KAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLL 121
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V EM R+ + D TT + + +Y + + ++A++ +
Sbjct: 122 TMYVENQKFLEALSVFAEM-REIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGI 180
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y L+ +YG E ++R ++ ++Y M+ + + A
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E S + + +I + K G+L+ A L ++ R G + + ++ Y
Sbjct: 241 LIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYE 300
Query: 244 RNG 246
R G
Sbjct: 301 RAG 303
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ ++ L Y + N+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFERMVDLFSKYKKYPNVVEVFEKMRGLGY-FPDS------NVIALVLNAYGKL 403
Query: 176 KDLPGAEKCFKEWES-GCATYD 196
+ A + E + GC D
Sbjct: 404 HEFDKANDVYLEMQDEGCVFSD 425
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 111/259 (42%), Gaps = 1/259 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + +++ + +L + + FN+L+ Y K G+ + + M+ S PD +TY+ +
Sbjct: 259 AQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALIN 318
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
AL N + GA R+ EM G + D F+ L + G + + + +++ ++
Sbjct: 319 ALCKENKMDGAHRLFYEMCERGLIPND-VIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQ 377
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ Y L+ + + G+L I + ++Y +I D+ A +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEI 437
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
KE + D + +I KEGR+ +AE R G P+ T+ + D + +
Sbjct: 438 RKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCK 497
Query: 245 NGDMKLAVDCLEKAIDTGR 263
GD + L++ G
Sbjct: 498 KGDAQTGFKLLKEMQSDGH 516
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 1/245 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L +M E L + + F +L+ +++ G + + Q+M + + PD YN
Sbjct: 327 DGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ A +++ M R G + D T++ L + G + A KE++
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRG-LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNG 445
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + LI + G + + R R + A +++Y M+ D
Sbjct: 446 IELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K KE +S ++ NV++ K G+++NA+ L + G P+ T+ + +
Sbjct: 506 KLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGH 565
Query: 243 LRNGD 247
R+ +
Sbjct: 566 HRHAN 570
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F++L+ K G ++EM + + PD TY + M A D ++++EM+
Sbjct: 453 FSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
DG + + T++ L + + G + A+ L + N D Y L+ + + N
Sbjct: 513 SDGHI-PNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANA 571
Query: 144 SEVYR 148
S+ Y+
Sbjct: 572 SKHYK 576
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 101/239 (42%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FNSL+ + G ++ + EM +I PD YT+++ + AL +I+ A+ ++ M
Sbjct: 237 FNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMM 296
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ G V D T+S+L Y KA+ + +Y +I G+ +
Sbjct: 297 KQG-VIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMV 355
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +++ + ++Y ++I L L + A + E + DI N +
Sbjct: 356 DEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSL 415
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I K ++ A L ++ + +G P+ T+ I D + G +K A D + + G
Sbjct: 416 IDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG 474
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 36/235 (15%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
KA+ + M L + + +N ++ K ++ ++ +EM I PD+ TYN
Sbjct: 320 VNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNS 379
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + IS A ++++EM +G + AD T+++L + + +KA +K+++++
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNG-IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQ 438
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ Y LI + G L +++ L +
Sbjct: 439 GIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLI-------------------------- 472
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
K + TY N+MI KEG AE L + G P+A T+E
Sbjct: 473 ----KGYSVNAWTY-----NIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYE 518
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 124/294 (42%), Gaps = 7/294 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L +M N+ F+ L+ K G+ + ++ M ++PD TY+
Sbjct: 251 KEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSL 310
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M VN+++ A+ V M R G VA +++ + + + + ++A KE+ +
Sbjct: 311 MDGYCLVNEVNKAKHVFSTMSRLG-VAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG 369
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI + G +S +++ + ++Y ++I VL + A
Sbjct: 370 IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAI 429
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K+ + + N++I K GRL+NA+++ + +G NA T+ I +
Sbjct: 430 ALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGL 489
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ G A L K + G +P + T T +R ++ + + AE L
Sbjct: 490 CKEGLFNEAEVLLSKMENNG------IIPDAVTYETIIRALFRKDENEKAEKLL 537
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 3/219 (1%)
Query: 45 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 104
EM I PD T+N + V + A + EM + D TFS L +
Sbjct: 223 SEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLK-NINPDVYTFSILVDALCK 281
Query: 105 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANI 163
G +A+ L + + D+ Y L+ Y +++ ++ ++ RL A+
Sbjct: 282 DGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAH- 340
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
SY MI L +K + A FKE D N +I K GR+ A +L +
Sbjct: 341 SYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM 400
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
G + T+ D +N + A+ ++K D G
Sbjct: 401 HNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA AL++K+K+ + S +N L+ K G + + Q++ +++TYN+
Sbjct: 426 DKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIM 485
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ L + AE ++ +M+ +G + D T+ + EKAE+ L+E+
Sbjct: 486 INGLCKEGLFNEAEVLLSKMENNG-IIPDAVTYETIIRALFRKDENEKAEKLLREM 540
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 28/311 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA L M E FN+++ + K+ EK + + ++ + D+ TYNV
Sbjct: 137 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVI 195
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + V++EM G + + TT++ + + AG A E++ R+
Sbjct: 196 LNGWCLIKRTPKTLEVLKEMVERG-INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 254
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y ++ +G G + ++ + P+ A +Y MIQVL ++
Sbjct: 255 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA--TYNAMIQVLCKKDNVEN 312
Query: 181 AEKCFKE-----WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A F+E +E TY NV+I G EEL +R G +PN +T+
Sbjct: 313 AVVMFEEMVRRGYEPNVTTY-----NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 367
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRT-----FMRHFEQEKDVD 290
+ YY +++ A+ EK G GD +P+ +T F+R ++ V
Sbjct: 368 NMMIRYYSECSEVEKALGLFEK---MGSGD---CLPNLDTYNILISGMFVRKRSEDMVVA 421
Query: 291 GAEGFL-EILK 300
G + F EIL+
Sbjct: 422 GNQAFAKEILR 432
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 116/291 (39%), Gaps = 8/291 (2%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+L+ +M+ L +G S F + YA G P+K + M D ++N + L
Sbjct: 106 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 165
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A + ++ GR + D T++ + + + K LKE+ R + +
Sbjct: 166 CKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPN 223
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
L+ Y ++ + + G + + + ++ ++Y ++ ++ A F
Sbjct: 224 LTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFD 283
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E + N MI K+ +ENA + E RRG +PN T+ + G
Sbjct: 284 EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 343
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ + +++ + G P+ +T +R++ + +V+ A G E
Sbjct: 344 EFSRGEELMQRMENEG------CEPNFQTYNMMIRYYSECSEVEKALGLFE 388
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 81/214 (37%), Gaps = 1/214 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T K +L++M E + + +N+++ + + G EMK D TY
Sbjct: 205 TPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 264
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +I A V +EM R+G V T++ + + + E A +E+ R
Sbjct: 265 VVHGFGVAGEIKRARNVFDEMIREG-VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 323
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+++ Y LI G S + + + +Y MI+ ++ A
Sbjct: 324 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 383
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 215
F++ SG ++ N++I R E+
Sbjct: 384 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 417
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 120/281 (42%), Gaps = 14/281 (4%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
M +N+++ Y TG + ++ M + PD+YTYN +R L A V+++
Sbjct: 121 MSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDD 177
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M R G V D T++ L + +++A + L E+ ++ D+ Y ++ Q G
Sbjct: 178 MLRRGCVP-DVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEG 236
Query: 142 NLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
+ + +SL PNT +SY +++ L + AEK E ++
Sbjct: 237 RVDDAMEFLKSLPSYGCEPNT--VSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
N++I + G +E A E+ ++ + G PN+ ++ + + M A+ +E +
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 354
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+G P + T + + +VD A L LK
Sbjct: 355 SSG------CYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 108/263 (41%), Gaps = 7/263 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL++M++ + +N ++ + G + ++ + + P++ +YN+
Sbjct: 204 KQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIV 263
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L AE+++ EM R GR + TF+ L S GL E A L ++
Sbjct: 264 LKGLCTAERWEDAEKLMAEMSRKGR-PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y ++ + + + + +P+ +SY ++ L ++
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDI--VSYNTLLTALCRGGEVDA 380
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + + + GC I N +I K G+ E A EL +G P+ T+ S
Sbjct: 381 AVELLHQLKDKGCTPVLISY-NTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTIS 439
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
R G ++ A+ K D G
Sbjct: 440 SGLCREGRIEEAIKAFCKVQDMG 462
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 12/251 (4%)
Query: 50 SSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFE 109
+S PD +YN + + A R++ M + D T++ L G +
Sbjct: 114 ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME----PDTYTYNTLIRGLCGRGRTD 169
Query: 110 KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
A L ++ R D+ Y L+ + + ++ +R ++Y ++
Sbjct: 170 NALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVV 229
Query: 170 QVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + A + K S GC + V+ G E R E+AE+L R+G
Sbjct: 230 NGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAE-RWEDAEKLMAEMSRKGR 288
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
PN T+ + + R G ++ A++ L++ G P+S + + F ++K
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG------CTPNSLSYNPILHAFCKQKK 342
Query: 289 VDGAEGFLEIL 299
+D A F+E++
Sbjct: 343 MDRAMAFVELM 353
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 100/230 (43%), Gaps = 7/230 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A +L+++ + +S+ +N ++ + K ++ A ++ M +S PD +YN
Sbjct: 307 LVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYN 366
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ AL ++ A ++ ++K G +++ + +AG E+A L E+
Sbjct: 367 TLLTALCRGGEVDAAVELLHQLKDKGCTPV-LISYNTVIDGLTKAGKTEEALELLNEMVT 425
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAF-PNTANISYLNMIQVLVNLKDL 178
+ D+ Y + + + G + E + + ++ + PNT + Y ++ L +
Sbjct: 426 KGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNT--VLYNAILLGLCKRRAT 483
Query: 179 PGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
A F S GC + T ++I A EG ++ A E+ RG
Sbjct: 484 HSAIDLFTYMVSNGCMPNESTYT-ILIEGLAYEGLVKEAREMMAELCSRG 532
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 12/252 (4%)
Query: 6 EALLEKMKELNLGFSS-------MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 58
E L+E+ +L FSS + +N+++ K G ++ ++ EM + P++ T
Sbjct: 305 EGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAAT 364
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
YN + + ++I A+ + +EM R G V D +FS+L + G +A +E+
Sbjct: 365 YNTLLVEICRRDNILEAQEIFDEMSRRG-VLPDLVSFSSLIGVLARNGHLYQALMHFREM 423
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLK 176
E D Y LI + + G LS+ ++ + R F + ++Y + L K
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV--VTYNTFLNGLCKKK 481
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A+ F E D +I Y K+G ++ A L E R P+ T+
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYN 541
Query: 237 IFSDYYLRNGDM 248
D + + G+M
Sbjct: 542 TLIDGFCKAGEM 553
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 133/320 (41%), Gaps = 7/320 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ + ++M + + F+SL+ + A+ GH + +EM+ S I+PD+ Y + +
Sbjct: 380 EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILI 439
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+S A ++ +EM G D T++ + + +F A+ E+ R
Sbjct: 440 DGFCRNGALSDALKMRDEMLARG-CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D + LI Y + GN+ + ++ ++ ++Y +I ++ A++
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ + D ++ + G L A L ++ +G PN T Y
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
R+GDM A + L K I G +P S + T + + +E +++ A + ++K
Sbjct: 619 RSGDMPKAYEYLSKMISNG------IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
Query: 304 DDLGVEVFEPLIRTYAAAGR 323
+ + ++ + A G+
Sbjct: 673 LQFNIITYNLILNGFCAEGK 692
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 108/249 (43%), Gaps = 1/249 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A+ L +M E + F +L+ Y K G+ +K + + M +++ PD TYN
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYN 541
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ++ A+ + ++M R + D ++ + + + +GL +A ++
Sbjct: 542 TLIDGFCKAGEMGRAKELWDDMIRKD-IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +L LI Y ++G++ + Y + + SY +I + +L
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A E E ++I N+++ + EG+++ AE++ + G +P+ T+ +
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720
Query: 241 YYLRNGDMK 249
++ +MK
Sbjct: 721 GHVSQDNMK 729
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L KM + S +N+L+ Y K + EK +I EM+ + + TYN+ +
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
A + AE+V+ +M G + D T+S+L + +V ++A R E+ R
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIG-INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 46/89 (51%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+ +M++ L F+ + +N ++ + G ++ ++++M I PD TY+
Sbjct: 659 EKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSL 718
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAAD 91
+ + +++ A R +EM + G V D
Sbjct: 719 INGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 139/336 (41%), Gaps = 13/336 (3%)
Query: 5 AEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+AL +E+ GF + F++ + + GH + ++ M PD YTY+
Sbjct: 283 GDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTV 342
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L ++ A+ ++ +M G D TTF+ L E+A +EL +
Sbjct: 343 INCLCNNGELEEAKGIVNQMVDSG-CLPDTTTFNTLIVALCTENQLEEALDLARELTVKG 401
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ + LI + G+ R++ ++ + ++Y +I L + L A
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKAL 461
Query: 183 KCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
KE E SGC + N +I K R+E AEE+ ++ G NA T+ D
Sbjct: 462 DLLKEMEVSGCPQSTV-TYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDG 520
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ A + +++ I G P++ T + + H+ ++ ++ A L+ +
Sbjct: 521 LCNAERIDDAAELVDQMISEG------LQPNNVTYNSILTHYCKQGNISKAADILQTMTA 574
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKME 335
++ V + LI A RT +LR ++M+
Sbjct: 575 NGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMK 610
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 36/260 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A+ ++ +M + + FN+L+ E+ + +E+ + P+ YT+N+
Sbjct: 353 EEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNIL 412
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL V D A R+ EEMK G D T++ L +G KA LKE+E
Sbjct: 413 INALCKVGDPHLAVRLFEEMKSSG-CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ + ++Y +I L + + AE
Sbjct: 472 CPQ-----------------------------------STVTYNTIIDGLCKRRRIEEAE 496
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F + + + N +I R+++A EL ++ G PN T+ +Y
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHY 556
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G++ A D L+ G
Sbjct: 557 CKQGNISKAADILQTMTANG 576
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 103/275 (37%), Gaps = 38/275 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+T+ A+ + + + EM + I PD T+N + AL A ++EEM
Sbjct: 164 YNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
VA D TTF+ L +VE G E A R + LI Y + G +
Sbjct: 224 -SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRV 282
Query: 144 S--------EVYRIWRSLRLAFPNTAN---------------------------ISYLNM 168
E+ + R+ F N +Y +
Sbjct: 283 GDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTV 342
Query: 169 IQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
I L N +L A+ + +SGC D N +I A E +LE A +L +G
Sbjct: 343 INCLCNNGELEEAKGIVNQMVDSGCLP-DTTTFNTLIVALCTENQLEEALDLARELTVKG 401
Query: 228 ADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
PN T+ I + + GD LAV E+ +G
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L+++M L +++ +NS++T Y K G+ K I+Q M A+ D TY
Sbjct: 528 DDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATL 587
Query: 63 MRALAAVNDISGAERVIEEMKRDG 86
+ L A +++ M+ G
Sbjct: 588 INGLCKARRTQAALKLLRGMRMKG 611
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 9 LEKMKELNLGFSSMPF-------NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
L+ +K + F M F NSL+ + G E++ + + MK + + P +TYN
Sbjct: 113 LDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNF 172
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L I AERV+E M+ +G++ D T++ + Y + G +KA +++E R
Sbjct: 173 LLNGLVNSVFIESAERVLEVME-NGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELR 231
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---LAFPNTANISYLNMIQVLVN-LKD 177
N D Y LI G+ ++ + L P A Y +I L K
Sbjct: 232 NVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHA---YSLVIGGLCKEGKC 288
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ G K + GC ++ + +I + AK G + A L ER ++ G +P+ T+ +
Sbjct: 289 VEGYAVFEKMIQKGCKV-NVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGV 347
Query: 238 FSDYYLRNGDMKLAVDCLE 256
+ ++G + A++ LE
Sbjct: 348 VVNCMCKSGRLDEAMEYLE 366
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 111/295 (37%), Gaps = 36/295 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE +LE M+ +G + +N+++ Y + G +K ++M+ ++ PD TY
Sbjct: 184 ESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTL 243
Query: 63 MRALAAVNDISGAERVIEEMK-------------------RDGRVAADWTTFSNL----- 98
++A A D + EM ++G+ + F +
Sbjct: 244 IQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGC 303
Query: 99 ---ASIYV-------EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
+IY + G +A + ++ D+ Y ++ ++G L E
Sbjct: 304 KVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAME 363
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNVMIGAY 207
R+ + Y ++I L + AEK F+E + GC D N +I A
Sbjct: 364 YLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPP-DSYCYNALIDAL 422
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
AK G+ + A +R G D T+ I + R + A+ + ID G
Sbjct: 423 AKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKG 477
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 8/215 (3%)
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
++SA LI +G G + E+ +WR ++ + +Y ++ LVN + AE+
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+ E+G D+ N MI Y + G+ + A E R P+ T+
Sbjct: 191 EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAE 250
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 305
GD L + L +D + G +P ++ K V+G F ++++K
Sbjct: 251 GDFDLCLS-LYHEMD----ENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGC-K 304
Query: 306 LGVEVFEPLIRTYAAAGRTSPVML--RRLKMEKVE 338
+ V ++ LI + A G ML R+K E +E
Sbjct: 305 VNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLE 339
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 88/251 (35%), Gaps = 1/251 (0%)
Query: 12 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
MKE + S +N L+ + E +++ M+ I PD TYN ++ V
Sbjct: 158 MKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGK 217
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
A +M+ VA D T+ L G F+ E++ AY
Sbjct: 218 TQKAFEKFRDMELR-NVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYS 276
Query: 132 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 191
+I + G E Y ++ + Y +I ++ A F+ +
Sbjct: 277 LVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKE 336
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
D+ V++ K GRL+ A E E R G NA + D + G + A
Sbjct: 337 GLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEA 396
Query: 252 VDCLEKAIDTG 262
E+ + G
Sbjct: 397 EKLFEEMVKKG 407
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 92/256 (35%), Gaps = 36/256 (14%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A+ EKM + + + +L+ AK G+ + + + MK + PD TY V + +
Sbjct: 293 AVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCM 352
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A +E + +G VA + +S+L +AG +AE+ +E+ + D
Sbjct: 353 CKSGRLDEAMEYLEFCRVNG-VAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPD 411
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
Y LI + G E LAF FK
Sbjct: 412 SYCYNALIDALAKCGKTDEA--------LAF---------------------------FK 436
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E + +MI +E + E A ++ + +G P A + S +G
Sbjct: 437 RMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSG 496
Query: 247 DMKLAVDCLEKAIDTG 262
+ A L++ G
Sbjct: 497 KVARACKLLDELAPMG 512
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 144/355 (40%), Gaps = 42/355 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
A A E M+ + ++ F SL+ YA + ++EMK+ + TY++
Sbjct: 280 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSIL 339
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-- 120
+ A +ND A+ + +E K + + +SN+ + ++G E+AE + E+E
Sbjct: 340 ISGFAKINDSQSADNLFKEAKTK-LSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDG 398
Query: 121 ------------------RNAHRDLS---------------AYQFLITLYGQTGNLSEVY 147
+N ++ L +Y L+ LY + G +++
Sbjct: 399 IDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKAL 458
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
I + + N +Y +I ++L D A F+E D + N++I A+
Sbjct: 459 SISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAF 518
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
K G ++ A + E+ ++ P+ + + + Y GDMK A+D L+ +G
Sbjct: 519 CKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSG----- 573
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
VP+ T + ++ V A L+ + A + ++R YAA+G
Sbjct: 574 -CVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG 627
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 110/258 (42%), Gaps = 1/258 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A+ E+M L +N L+ + K G+ ++ I+++M+ + P + + +
Sbjct: 492 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 551
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A D+ A ++ M+R G V T++ L V ++A L ++
Sbjct: 552 GYAVAGDMKSALDTLDLMRRSGCVPT-VMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 610
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y ++ Y +G++ + + + ++ + Y +++ + A
Sbjct: 611 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 670
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E + + N++I +A+ G + AE+L ++ + G PN T+ + + +
Sbjct: 671 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 730
Query: 245 NGDMKLAVDCLEKAIDTG 262
GDM+ A +E+ +D G
Sbjct: 731 AGDMQRAEKVIEEMVDVG 748
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 1/249 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + E++KE S + + L+ LY K G K +I +EM++ I ++ TY++ +
Sbjct: 421 KCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLI 480
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
++D + A + EEM R G + D ++ L + + G ++A L++++
Sbjct: 481 NGFIHLHDFANAFAIFEEMLRSG-LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERM 539
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
A++ +I Y G++ +R + ++Y +I LV + A
Sbjct: 540 QPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVS 599
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ T + +++ YA G + A E + + G + +E
Sbjct: 600 VLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACC 659
Query: 244 RNGDMKLAV 252
++G M+ A+
Sbjct: 660 KSGRMQSAL 668
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 127/337 (37%), Gaps = 44/337 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L+ +M+E + ++S+M Y + K + + +K P +Y
Sbjct: 385 ERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCL 444
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++ A + +EM+ G + + T+S L + ++ F A +E+
Sbjct: 445 LNLYVKIGKVAKALSISKEMESCG-IKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 503
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + Y LI + + GN+ I ++ +N ++ +I+
Sbjct: 504 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE------------ 551
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
YA G +++A + + RR G P T+
Sbjct: 552 -----------------------GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL 588
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+R ++ AV L+K G P+ T MR + D+ A + +K++
Sbjct: 589 VRKHKVQRAVSVLDKMSIAG------ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 642
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVM--LRRLKMEKV 337
L V ++E L+R +GR + R + +K+
Sbjct: 643 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKI 679
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA K+KE L + +L+ K+G + A+ +EM I +++ YN+ +
Sbjct: 631 KAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 690
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A D+ AE ++++MK DG V + T+++ + +AG ++AE+ ++E+ +
Sbjct: 691 DGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGL 749
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
++ Y LI + + + + ++LA SY ++ L++
Sbjct: 750 KPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLS 800
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A+ +M + ++ +N L+ +A+ G + ++++MK + P+ +TY +
Sbjct: 665 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSY 724
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A D+ AE+VIEEM G + + T++ L + L ++A + +E++
Sbjct: 725 INACCKAGDMQRAEKVIEEMVDVG-LKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG 783
Query: 123 AHRDLSAYQFLIT 135
D ++Y L+T
Sbjct: 784 LKPDEASYHCLVT 796
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 12/252 (4%)
Query: 6 EALLEKMKELNLGFSS-------MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYT 58
E L+E+ +L FSS + +N+++ K G ++ ++ EM + P++ T
Sbjct: 305 EGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAAT 364
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
YN + + ++I A+ + +EM R G V D +FS+L + G +A +E+
Sbjct: 365 YNTLLVEICRRDNILEAQEIFDEMSRRG-VLPDLVSFSSLIGVLARNGHLYQALMHFREM 423
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLK 176
E D Y LI + + G LS+ ++ + R F + ++Y + L K
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV--VTYNTFLNGLCKKK 481
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
A+ F E D +I Y K+G ++ A L E R P+ T+
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYN 541
Query: 237 IFSDYYLRNGDM 248
D + + G+M
Sbjct: 542 TLIDGFCKAGEM 553
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 133/320 (41%), Gaps = 7/320 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ + ++M + + F+SL+ + A+ GH + +EM+ S I+PD+ Y + +
Sbjct: 380 EAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILI 439
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+S A ++ +EM G D T++ + + +F A+ E+ R
Sbjct: 440 DGFCRNGALSDALKMRDEMLARG-CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D + LI Y + GN+ + ++ ++ ++Y +I ++ A++
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ + D ++ + G L A L ++ +G PN T Y
Sbjct: 559 LWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYC 618
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
R+GDM A + L K I G +P S + T + + +E +++ A + ++K
Sbjct: 619 RSGDMPKAYEYLSKMISNG------IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672
Query: 304 DDLGVEVFEPLIRTYAAAGR 323
+ + ++ + A G+
Sbjct: 673 LQFNIITYNLILNGFCAEGK 692
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 108/249 (43%), Gaps = 1/249 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M A+ L +M E + F +L+ Y K G+ +K + + M +++ PD TYN
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYN 541
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ ++ A+ + ++M R + D ++ + + + +GL +A ++
Sbjct: 542 TLIDGFCKAGEMGRAKELWDDMIRKD-IIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +L LI Y ++G++ + Y + + SY +I + +L
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A E E ++I N+++ + EG+++ AE++ + G +P+ T+ +
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720
Query: 241 YYLRNGDMK 249
++ +MK
Sbjct: 721 GHVSQDNMK 729
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L KM + S +N+L+ Y K + EK +I EM+ + + TYN+ +
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLIL 684
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
A + AE+V+ +M G + D T+S+L + +V ++A R E+ R
Sbjct: 685 NGFCAEGKMQEAEQVLRKMIEIG-INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 46/89 (51%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+ +M++ L F+ + +N ++ + G ++ ++++M I PD TY+
Sbjct: 659 EKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSL 718
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAAD 91
+ + +++ A R +EM + G V D
Sbjct: 719 INGHVSQDNMKEAFRFHDEMLQRGLVPDD 747
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 132/354 (37%), Gaps = 43/354 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTY 59
+ + A LL + + L S +L++ G + A+ E A I P + Y
Sbjct: 243 LPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAY 302
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N ++ + + AE+V++EM + G VA D T+S L Y AG +E A LKE+E
Sbjct: 303 NALLKGYVRIASLKNAEQVLDEMSQCG-VAPDEATYSLLVDAYTRAGRWESARILLKEME 361
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ ++ + G+ + + + R ++ + Y MI L
Sbjct: 362 ADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLG 421
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR--------------- 224
A F + D+ N +I A+ K GR + A EL E R
Sbjct: 422 HAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMI 481
Query: 225 --------------------RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRG 264
+G PN T+ D Y R+G K A+DC+E +
Sbjct: 482 NLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAM----KA 537
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
DG K PS + + Q D A ++ +K ++ + V LI +
Sbjct: 538 DGLK--PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF 589
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 9/226 (3%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGA---ERVIEEMKRDGRVAADWTTFSNLA 99
++ ++ +PD +Y+ + +L D A ER++ ++ R+ R+ D FS+L
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDL-RESRLEPDAPLFSDLI 235
Query: 100 SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-- 157
S + A L + A L + +A LI+ G G ++E ++ LA
Sbjct: 236 SAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEI 295
Query: 158 -PNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA 216
P T +Y +++ V + L AE+ E D ++++ AY + GR E+A
Sbjct: 296 KPRTR--AYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353
Query: 217 EELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
L + G P++ + + GD + A L + +G
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASG 399
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 116/274 (42%), Gaps = 10/274 (3%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
SL+ KTG K +++ ++ S +PD TYNV + +I A ++++ M
Sbjct: 150 SLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS-- 207
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
V+ D T++ + ++G ++A L R + D+ Y LI + + +
Sbjct: 208 --VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQ 265
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++ +R ++Y +I + L A + S ++ N+++
Sbjct: 266 AMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILR 325
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
+ GR +AE+ R+G P+ T+ I ++ R G + A+D LEK G
Sbjct: 326 SMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG--- 382
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
P+S + + ++K ++ A +L+I+
Sbjct: 383 ---CTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 141/320 (44%), Gaps = 23/320 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KA ++E +++ + +N L++ Y KTG +I + +Q + S+ PD TYN
Sbjct: 161 TWKATRVMEILEDSGAVPDVITYNVLISGYCKTG---EIGSALQLLDRMSVSPDVVTYNT 217
Query: 62 WMRALAAVNDISGAERVIE-EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+R L + A V++ +M+R+ D T++ L + +A + L E+ +
Sbjct: 218 ILRTLCDSGKLKEAMEVLDRQMQRE--CYPDVITYTILIEATCKESGVGQAMKLLDEMRD 275
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI-QVLVNLKDLP 179
+ D+ Y LI + G L E R + ++ N+ N+I + + +
Sbjct: 276 KGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMP-SYGCQPNVITHNIILRSMCSTGRWM 334
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
AEK E GC+ + N++I ++G + A ++ E+ + G PN+ ++
Sbjct: 335 DAEKFLAEMIRKGCSP-SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPL 393
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
++ M+ A++ L+ + G P T T + ++ VD A +EI
Sbjct: 394 LHALCKDKKMERAIEYLDIMVSRG------CYPDIVTYNTLLTALCKDGKVDVA---VEI 444
Query: 299 LKKAVDDLGVEVFEPLIRTY 318
L + LG + P++ TY
Sbjct: 445 LNQ----LGSKGCSPVLITY 460
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 103/267 (38%), Gaps = 36/267 (13%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL++M++ + +N L+ K G ++ + M + P+ T+N+ +
Sbjct: 265 QAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIIL 324
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLF--------------- 108
R++ + AE+ + EM R G + TF+ L + GL
Sbjct: 325 RSMCSTGRWMDAEKFLAEMIRKG-CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGC 383
Query: 109 -----------------EKAERALKELE---NRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
+K ERA++ L+ +R + D+ Y L+T + G +
Sbjct: 384 TPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 443
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
I L + I+Y +I L + A K E + DI + ++G +
Sbjct: 444 ILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLS 503
Query: 209 KEGRLENAEELKERARRRGADPNAKTW 235
+EG+++ A G PNA T+
Sbjct: 504 REGKVDEAIAFFHDLEEMGVKPNAITY 530
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRAL 66
+L M L + +++ +N+++ + K E++ +++ EM ++ S PD T+N ++RA
Sbjct: 220 ILADMSCLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFNTFIRAY 279
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
I E+ +E + G + D T++++ S Y +AG+++K + L +E R
Sbjct: 280 GNSEQIEKMEKWYKEFQLMG-IEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPT 338
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ +I +G+ GN+ E+ +++++ +++Y +++ DL + +
Sbjct: 339 IVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILR 398
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ E+ D + N +I Y + G + EL + P+ T+
Sbjct: 399 QIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITF 447
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NS+++ Y K G +K+ +++ M+ P T N + + +I E + MK
Sbjct: 307 YNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMK 366
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + T+ +L + Y ++G EK + L+++EN + D + LI +YGQ GN+
Sbjct: 367 FQG-MKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCLINVYGQAGNV 425
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVL 172
++ ++ ++ I++ MI+ L
Sbjct: 426 RKMGELFLEMKENKCVPDGITFATMIRAL 454
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 131/322 (40%), Gaps = 44/322 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTYNV 61
E+A L E M L S + +L++ Y ++G K + + EMK+ S PD +TY++
Sbjct: 144 EQASLLFEIMFSEGLKPSIDVYTALVSAYGQSGLLHKAISTVDEMKSISDCKPDVHTYSI 203
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL-EN 120
+ + ++++ +M G + + T++ + + + +A +FE+ E L E+ E+
Sbjct: 204 LIDCCTRLRRFDLLKKILADMSCLG-ITCNTVTYNTIINGFGKAKMFEQMESLLLEMIES 262
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ DL + I YG + + ++
Sbjct: 263 DSCPPDLITFNTFIRAYGNSEQIEKM---------------------------------- 288
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
EK +KE++ DI N MI +Y K G + + + +R P T D
Sbjct: 289 -EKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKRFFSPTIVTMNTIID 347
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ R G+ ++ +E+ + G K P+S T + + + + D++ + L ++
Sbjct: 348 SFGRAGN----IEEMEEYFKNMKFQGMK--PNSVTYCSLVNAYGKSGDLEKVDSILRQIE 401
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
+ +F LI Y AG
Sbjct: 402 NSDVVPDTPLFNCLINVYGQAG 423
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ E + MK + +S+ + SL+ Y K+G EK+ +I+++++ S ++PD+ +N
Sbjct: 356 EEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKVDSILRQIENSDVVPDTPLFNCL 415
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ ++ + EMK + + D TF+ + G+ E A+R LEN+
Sbjct: 416 INVYGQAGNVRKMGELFLEMK-ENKCVPDGITFATMIRALKAQGMTEDAQR----LENK 469
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/149 (18%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +K +++L M++ + + N+++ + + G+ E++ + MK + P+S TY
Sbjct: 319 MYDKMKSVLNFMEKRFFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYC 378
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A D+ + ++ +++ + V D F+ L ++Y +AG K E++
Sbjct: 379 SLVNAYGKSGDLEKVDSILRQIE-NSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKE 437
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D + +I G + R+
Sbjct: 438 NKCVPDGITFATMIRALKAQGMTEDAQRL 466
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 131/301 (43%), Gaps = 10/301 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A +LEKMKE+ L +++ +N+L+ Y G K EM +I+P TYN+
Sbjct: 323 EEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLL 382
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL + A+ +I++M G + D T++ L + Y G +KA E+ ++
Sbjct: 383 IHALFLEGKMDEADGMIKDMGDSG-IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG 441
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L Y LI + + + ++ + + I + +I +L A
Sbjct: 442 IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAF 501
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE + D N ++ +EG++E A EL + +RRG P+ ++ Y
Sbjct: 502 ALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGY 561
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ GD+ A ++ + G + P+ T ++ + + D AE E+LK+
Sbjct: 562 SKRGDINDAFTIRDEMLSIG------FNPTLLTYNALIQGLCKNQQGDLAE---ELLKEM 612
Query: 303 V 303
V
Sbjct: 613 V 613
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 9/300 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN++++L+ K E + + EM I YT+N+ + L + A+ I M+
Sbjct: 204 FNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSME 263
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T++ + Y G E A L ++NR D Y LI+ + G L
Sbjct: 264 NLG-VKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKL 322
Query: 144 SEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
E I ++ + TA ++Y +I N DL A E + N+
Sbjct: 323 EEASGILEKMKEIGLLPTA-VTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNL 381
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+I A EG+++ A+ + + G P++ T+ I + Y R G+ K A + ++ I G
Sbjct: 382 LIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG 441
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P+ T + + + + A+ E + + + +F LI + A G
Sbjct: 442 ------IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANG 495
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 103/263 (39%), Gaps = 5/263 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE L +M L + + FN ++ + K G +K I M+ + P+ TYN
Sbjct: 217 TETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNT 276
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + + GA V++ MK G V D T+ +L S + G E+A L++++
Sbjct: 277 VIHGYCSRGRVEGARMVLDIMKNRG-VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEI 335
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEV--YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
Y LI Y G+L + YR R P + +Y +I L +
Sbjct: 336 GLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVS--TYNLLIHALFLEGKMD 393
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A+ K+ D N++I Y + G + A L + +G P T+
Sbjct: 394 EADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLI 453
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
+ MK A D EK I G
Sbjct: 454 YVLSKRNRMKAADDLFEKIIREG 476
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 7/299 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA+ + M+ L + + + +N+++ Y G E ++ MK + PDSYTY
Sbjct: 253 KKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSL 312
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A ++E+MK G + T++ L Y G KA E+ R
Sbjct: 313 ISGMCKGGKLEEASGILEKMKEIGLLPT-AVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+S Y LI G + E + + + + +I+Y +I + A
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
E S + +I +K R++ A++L E+ R GA P+ + D +
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
NG++ A L++ D VP T T M+ +E V+ A L+ +K+
Sbjct: 492 CANGNLDRAFALLKEM------DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKR 544
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ALL++M + N+ + +N+LM + G E+ +++EMK I PD +YN
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + DI+ A + +EM G T++ L + + AE LKE+ ++
Sbjct: 558 ISGYSKRGDINDAFTIRDEMLSIG-FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKG 616
Query: 123 AHRDLSAYQFLITLYGQTGNLSE 145
D S Y LI G+ + SE
Sbjct: 617 ITPDDSTYFSLIEGIGKVDDSSE 639
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 145/362 (40%), Gaps = 49/362 (13%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN L+ AK E+ + +M ++ PD YTY + +R+L + I ++ E M
Sbjct: 103 FNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMT 162
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + T+ ++ + AG ++A +++ + D Y LI +G+TG L
Sbjct: 163 AQG-CQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQL 221
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCAT-------- 194
+ R +F N ++Y +++ L D+ G + F + ++ G +
Sbjct: 222 ERAFDFVGKSR-SFTN--EVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAIL 278
Query: 195 --------------------------YDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
YDI N ++ +K GR+E A EL + + +G
Sbjct: 279 IERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGL 338
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
+ + T+ I + R G + A L + + G P+ T T + + + +
Sbjct: 339 NADTVTYNILINGLGRAGKLDAAGALLLEMEENG------CAPNIITYNTLISSYGKWSN 392
Query: 289 VDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKK 345
+ A FLE+ ++ V V + LI + AGRT + R +K E + +
Sbjct: 393 LSAATRLFLEMKERGVAP-NVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYN 451
Query: 346 LL 347
LL
Sbjct: 452 LL 453
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 5/243 (2%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +NSL++ + G + + + +MKA ++ + TY + + L + ++ E
Sbjct: 238 VTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLE 297
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M D + D T +N+ +AG E A ++++ + + D Y LI G+ G
Sbjct: 298 MV-DNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAG 356
Query: 142 NLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
L + + PN I+Y +I +L A + F E + ++
Sbjct: 357 KLDAAGALLLEMEENGCAPNI--ITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVS 414
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
+ +I + K GR + A L + G PN T+ + D +R G A++ L +
Sbjct: 415 YSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMR 474
Query: 260 DTG 262
D G
Sbjct: 475 DAG 477
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 101/247 (40%), Gaps = 4/247 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ + L+E M++ + FN+L+ +Y + EK + P +YTY+
Sbjct: 12 DDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSM 71
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ D+ + ++M + + D TTF+ L +A E+A ++ N
Sbjct: 72 IQVFMKGGDVQNGLLMYKQMLK-AKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLN 130
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y LI G G + V +++ S+ +Y +++ + + A
Sbjct: 131 VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEAC 190
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F++ D N++I A+ K G+LE A + ++R + N T+
Sbjct: 191 DIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSR---SFTNEVTYNSLLSSL 247
Query: 243 LRNGDMK 249
R GD++
Sbjct: 248 GRKGDIQ 254
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 14/239 (5%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A + ++M + L ++ +N L+ + KTG E+ + + ++ + TYN
Sbjct: 186 VDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRS---FTNEVTYNS 242
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE----AGLFEKAERALKE 117
+ +L DI G + +MK G V+ + T +I +E AG E + E
Sbjct: 243 LLSSLGRKGDIQGLMELFGQMKAKGLVSNELTY-----AILIERLGWAGRVEDVWQLYLE 297
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ + + D+ ++ + G + + +++ ++ N ++Y +I L
Sbjct: 298 MVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGK 357
Query: 178 LPGAEKCFKEWE-SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
L A E E +GCA +I N +I +Y K L A L + RG PN ++
Sbjct: 358 LDAAGALLLEMEENGCAP-NIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY 415
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A L + MK L ++ +N L+ + G + A++ EM+ + P+ TYN
Sbjct: 323 VEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNT 382
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + +++S A R+ EMK G VA + ++S+L + +AG + A +E++
Sbjct: 383 LISSYGKWSNLSAATRLFLEMKERG-VAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAE 441
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
+ Y LI + G R +R
Sbjct: 442 GCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMR 474
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 79/197 (40%), Gaps = 1/197 (0%)
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
L A +R++E M++D R D F+ L IY EA + EKA + L
Sbjct: 5 LGAARRYDDVQRLVESMQKD-RTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRP 63
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
Y +I ++ + G++ +++ + A + ++ +I L + A F
Sbjct: 64 TAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVF 123
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+ + D+ ++I + GR++ +L E +G PN T+ +
Sbjct: 124 GDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSA 183
Query: 246 GDMKLAVDCLEKAIDTG 262
G + A D ++ + G
Sbjct: 184 GRVDEACDIFQQMVQKG 200
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L +MKE + + + ++SL+ + K G + ++ +EMKA P+ TYN+ +
Sbjct: 396 ATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLID 455
Query: 65 ALAAVNDISGAERVIEEMKRDG 86
L A + EM+ G
Sbjct: 456 CLIRAGRFGAAMEYLREMRDAG 477
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE + E+M+E N+ ++S+++ + G+ ++ A+ EM I+P+++TY
Sbjct: 304 EEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGAL 363
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + AE ++ EM+ G V + F+ Y G ++A R +E +
Sbjct: 364 IGGVCKAGQMEAAEILLLEMQSKG-VDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKG 422
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D+ Y L + E I S+ + PN +++ I++ +L
Sbjct: 423 INADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNV--VTFTMFIEIYCKEGNLAE 480
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
AE+ F++ E +I N +I AY K+ +++ A ++K +G P+ T+
Sbjct: 481 AERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTY 535
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 130/296 (43%), Gaps = 12/296 (4%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIM-PDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
++ + + G EK ++ EM I+ P+ +TYN + A D G + +++ M+++
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
+V T+S L Y +G E+AE+ +E+ +N D+ Y +I+ + GN+
Sbjct: 282 -QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKR 340
Query: 146 VYRIW--RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ ++ S R PN +Y +I + + AE E +S ++ + N
Sbjct: 341 AFALFDEMSQRDIVPNAH--TYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTT 398
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ Y + G+++ A L+ ++G + + T+ I L NG KL K I
Sbjct: 399 MDGYCRRGKMDEALRLQAIMEKKGINADVFTYNI-----LANGLCKLHRYDEAKCILNSM 453
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
+ G P+ T F+ + +E ++ AE ++K + + + LI Y
Sbjct: 454 VEKGVK-PNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYC 508
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 5/235 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE LL +M+ + + + FN+ M Y + G ++ + M+ I D +TYN+
Sbjct: 374 EAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNIL 433
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L ++ A+ ++ M G V + TF+ IY + G +AER +++E +
Sbjct: 434 ANGLCKLHRYDEAKCILNSMVEKG-VKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
++ Y LI Y + + + ++I + + P+ S L + +V D
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVD--E 550
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A K F E T ++ MI +KEGR + A +L + + G P+ + +
Sbjct: 551 ALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVF 605
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 3/259 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
+ +L+ M++ + FS ++ L+ Y+ +G E+ I +EM+ +I D Y Y+ +
Sbjct: 271 VDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMIS 330
Query: 65 ALAAVNDISGAERVIEEM-KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ ++ A + +EM +RD + + T+ L +AG E AE L E++++
Sbjct: 331 WSRRLGNMKRAFALFDEMSQRD--IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGV 388
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+L + + Y + G + E R+ + N +Y + L L A+
Sbjct: 389 DLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKC 448
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
++ + I Y KEG L AE L ++G PN T+ D Y
Sbjct: 449 ILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYC 508
Query: 244 RNGDMKLAVDCLEKAIDTG 262
+ +K A + I+ G
Sbjct: 509 KKEKVKQAHKIKSEMINKG 527
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 129/317 (40%), Gaps = 37/317 (11%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE + +MK LNL P+N ++ +Y + +K+ A+ E+ + + PD++TY + +R
Sbjct: 90 AEDTMSEMKSLNLITRVEPYNIMLDMYKRKNEDDKVRAMYDELSSLGVAPDAHTYLIVLR 149
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + G E A+ F + E +
Sbjct: 150 AKQKIGGFDGIE-------------AEVRKFLD---------------------EQLTSR 175
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ L Y+ ++ +Y +L+ + + L F ++ SY ++ L ++ AE+
Sbjct: 176 QPLFIYECMLRIYTLLRDLAAIENLRSILLKTFKKFSSSSYNCLLDSYRQLGEVERAERL 235
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F E + T +I+ MI YA GR+E A EL ++ R G + + + Y+
Sbjct: 236 FNEIGNKF-TLNIQSYRAMIAVYASNGRMEKANELYKQLFRAGFECHPAIYHAMVAGYID 294
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
D A+ KA D R G P T +R ++ D AE + LK+
Sbjct: 295 ARDHSNALIQYGKAWD--RSLLGHPKPLRATTLLVLRVLAEQGDFSRAESIVRDLKRERQ 352
Query: 305 DLGVEVFEPLIRTYAAA 321
VEV+ L++ Y A
Sbjct: 353 GSDVEVYNWLLKAYIKA 369
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 130/326 (39%), Gaps = 28/326 (8%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
LL MK+ + S + +N+++ A+ G E + + EM+ I PD TYN + A
Sbjct: 193 LLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGAC 252
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A AE V M G + D T+S L + + EK L+E+E+ D
Sbjct: 253 AHRGLGDEAEMVFRTMNESG-IVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPD 311
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG---- 180
+++Y L+ Y + G++ E ++R ++ A N A S VL+NL G
Sbjct: 312 ITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYS------VLLNLYGKHGRYDD 365
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE--IF 238
F E + D N++I + + G + L +PN +T+E IF
Sbjct: 366 VRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIF 425
Query: 239 S--DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
+ L K+ + EK I VPSS+ + F Q + A
Sbjct: 426 ACGKGGLYEDAKKILLHMNEKGI----------VPSSKAYTGVIEAFGQAALYEEALVVF 475
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAG 322
+ + + VE + I +A G
Sbjct: 476 NTMNEVGSNPTVETYNSFIHAFARGG 501
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 150/353 (42%), Gaps = 26/353 (7%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
L +M+ + + +N+L+ A G ++ + + M S I+PD TY+ ++
Sbjct: 228 GLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTF 287
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+N + ++ EM+ G + D T+++ L Y E G ++A ++++ +
Sbjct: 288 GKLNRLEKVSELLREMESGGNL-PDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVAN 346
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y L+ LYG+ G +V I+ ++++ + +Y +IQV G FK
Sbjct: 347 AATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVF-------GEGGYFK 399
Query: 187 EWESGCATYDIRVTNV---------MIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
E + +D+ NV +I A K G E+A+++ +G P++K +
Sbjct: 400 EVVT--LFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTG 457
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ + + + A+ + G P+ ET +F+ F + AE L
Sbjct: 458 VIEAFGQAALYEEALVVFNTMNEVGSN------PTVETYNSFIHAFARGGLYKEAEAILS 511
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
+ ++ V F +I+ + G+ + ++MEK E ++ LE +
Sbjct: 512 RMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANC-EPNELTLEVV 563
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 122/299 (40%), Gaps = 21/299 (7%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ ++TL + G +K + EM ++ + Y Y + A + ++ MK
Sbjct: 139 YTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMK 198
Query: 84 RDGRVAADWTTFSNLASIYVEAGL-FEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 142
++ RV+ T++ + + GL +E E+ + D+ Y L+ G
Sbjct: 199 QE-RVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGL 257
Query: 143 LSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
E ++R++ + P+ SYL +Q L L + +E ESG DI
Sbjct: 258 GDEAEMVFRTMNESGIVPDINTYSYL--VQTFGKLNRLEKVSELLREMESGGNLPDITSY 315
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC-LEKAI 259
NV++ AYA+ G ++ A ++ + + G NA T+ + + Y ++G D LE +
Sbjct: 316 NVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKV 375
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
D G + + I+ F G G+ + + D+ E EP + TY
Sbjct: 376 SNTDPDAGTY---NILIQVF-----------GEGGYFKEVVTLFHDMVEENVEPNMETY 420
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 1/223 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
++ L+ LY K G + + I EMK S+ PD+ TYN+ ++ + +M
Sbjct: 350 YSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMV 409
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ V + T+ L + GL+E A++ L + + AY +I +GQ
Sbjct: 410 EE-NVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALY 468
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E ++ ++ N +Y + I AE D+ N +
Sbjct: 469 EEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGV 528
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
I A+ + G+ E A + + +PN T E+ Y G
Sbjct: 529 IKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAG 571
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A + M E+ + +NS + +A+ G ++ AI+ M S + D +++N
Sbjct: 467 LYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFN 526
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++A A + EM++ + T + S+Y AGL +++E +E++
Sbjct: 527 GVIKAFRQGGQYEEAVKSYVEMEK-ANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKA 585
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
+ Y ++ LY + L++ Y +
Sbjct: 586 SGILPSVMCYCLMLALYAKNDRLNDAYNL 614
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 82/213 (38%), Gaps = 1/213 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
L M E N+ + + L+ K G E I+ M I+P S Y + A
Sbjct: 403 TLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAF 462
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A V M G T+++ + GL+++AE L + RD
Sbjct: 463 GQAALYEEALVVFNTMNEVGS-NPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRD 521
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ ++ +I + Q G E + + + A ++ ++ V + + +E+ F+
Sbjct: 522 VHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQ 581
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E ++ + +M+ YAK RL +A L
Sbjct: 582 EIKASGILPSVMCYCLMLALYAKNDRLNDAYNL 614
>gi|302823876|ref|XP_002993586.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
gi|300138598|gb|EFJ05361.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
Length = 451
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 110/297 (37%), Gaps = 40/297 (13%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
P TYN+ RA A AE + E+ R + D TF+ + Y + GL+ E
Sbjct: 169 PSLATYNMLTRACAQAGLTDKAEALFLELLRREDLKPDAYTFNGIMDAYAKKGLYRDMEY 228
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
LKE+ DL + LI YG+ G+ ++ R ++S LV
Sbjct: 229 KLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKS-------------------LV 269
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
NL SGC N M+ +Y + L E++ R G P+
Sbjct: 270 NL--------------SGCKP-SATTFNSMLASYGQSRELGKMEQVLVRMDMAGLGPDLT 314
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ Y R G++ C +K + + P T+ +R + + VD AE
Sbjct: 315 TFNTLMSSYGRAGELDTMRKCFDKMVRS------PVKPQVSTLDVLLRAYAEHGLVDEAE 368
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAI 350
K V + L + Y + + + KME+ V + LL+A+
Sbjct: 369 ALFINASKLDIKPAVSSYLILFKAYGEERQLDKMTVLMSKMEQSGVESGQEFLLQAL 425
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 36/243 (14%)
Query: 1 MTEKAEAL-LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
+T+KAEAL LE ++ +L + FN +M YAK G + ++EM + PD T+
Sbjct: 186 LTDKAEALFLELLRREDLKPDAYTFNGIMDAYAKKGLYRDMEYKLKEMSEHGVRPDLVTF 245
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
NV + A D ER + + TTF+++ + Y ++ K E+ L ++
Sbjct: 246 NVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLASYGQSRELGKMEQVLVRMD 305
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
DL+ + L++ YG+ G L +
Sbjct: 306 MAGLGPDLTTFNTLMSSYGRAGELDTM--------------------------------- 332
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
KCF + + +V++ AYA+ G ++ AE L A + P ++ I
Sbjct: 333 --RKCFDKMVRSPVKPQVSTLDVLLRAYAEHGLVDEAEALFINASKLDIKPAVSSYLILF 390
Query: 240 DYY 242
Y
Sbjct: 391 KAY 393
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 19/270 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA L M E FN+++ + K+ EK + + ++ + D+ TYNV
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVI 201
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A V++EM G + + TT++ + + AG A E++ R+
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERG-INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ Y ++ +G G + ++ + P+ A +Y MIQVL ++
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA--TYNAMIQVLCKKDNVEN 318
Query: 181 AEKCFKE-----WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A F+E +E TY NV+I G EEL +R G +PN +T+
Sbjct: 319 AVVMFEEMVRRGYEPNVTTY-----NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
+ YY +++ A+ EK G GD
Sbjct: 374 NMMIRYYSECSEVEKALGLFEK---MGSGD 400
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 117/291 (40%), Gaps = 8/291 (2%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+L+ +M+ L +G S F + YA G P+K + M D ++N + L
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A + ++ GR + D T++ + + + KA LKE+ R + +
Sbjct: 172 CKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPN 229
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
L+ Y ++ + + G + + + ++ ++Y ++ ++ A F
Sbjct: 230 LTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFD 289
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E + N MI K+ +ENA + E RRG +PN T+ + G
Sbjct: 290 EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ + +++ + G P+ +T +R++ + +V+ A G E
Sbjct: 350 EFSRGEELMQRMENEG------CEPNFQTYNMMIRYYSECSEVEKALGLFE 394
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 99/264 (37%), Gaps = 4/264 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T KA +L++M E + + +N+++ + + G EMK D TY
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +I A V +EM R+G V T++ + + + E A +E+ R
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREG-VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+++ Y LI G S + + + +Y MI+ ++ A
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN---AEELKERARRRGADPNAKTWEIF 238
F++ SG ++ N++I R E+ A +L RG P T+
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRV 449
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTG 262
+ L G+ A + L +G
Sbjct: 450 LNGLLLTGNQAFAKEILRLQSKSG 473
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 133/330 (40%), Gaps = 23/330 (6%)
Query: 4 KAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+A+ LL M E S + +N+++ + K G K + +EM I PD TY+
Sbjct: 202 QADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 261
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ AL + AE + +M G + +WT ++NL Y G +++A R KE+ +
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNKGVLPDNWT-YNNLIYGYSSTGQWKEAVRVFKEMRRQ 320
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ------VLVNL 175
+ D+ A L+ + G + E ++ ++ + N SY M+ LV++
Sbjct: 321 SILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDM 380
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
DL F I NV+I AYA G L+ A + R G P+ T+
Sbjct: 381 TDL------FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTY 434
Query: 236 EIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF 295
R G M A++ + ID G VP ++ F + A+
Sbjct: 435 MTVIAALCRIGKMDDAMEKFNQMIDQG------VVPDKYAYHCLIQGFCTHGSLLKAKEL 488
Query: 296 L-EILKKAVDDLGVEVFEPLIRTYAAAGRT 324
+ EI+ + L + F +I GR
Sbjct: 489 ISEIMNNGM-RLDIVFFGSIINNLCKLGRV 517
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 133/359 (37%), Gaps = 42/359 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KAEA L +M + + +N+L+ Y+ TG ++ + +EM+ SI+PD N
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
M +L I A V + M G+ +
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
A TF+ L Y G+ +KA E+ + + Y +I + G + +
Sbjct: 393 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ + +Y +IQ L A++ E + DI +I
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
K GR+ +A+ + + G P+A + + D Y G M+ A+ + + G
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG------ 566
Query: 269 WVPSSETIRTFMRHFEQEKDVD-GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSP 326
P+ T + + + +D G F E+L+K + + ++ +I AGRT P
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI-LYNIIIDGLFEAGRTVP 624
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 103/264 (39%), Gaps = 7/264 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMK--ASSIMPDSYTYN 60
E + LL + EL +N L+ G + +++ M + PD YN
Sbjct: 166 EALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ D++ A + +EM + G + D T+S++ +A +KAE L+++ N
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRG-IPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDL 178
+ D Y LI Y TG E R+++ +R P+ ++ L + L +
Sbjct: 285 KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL--MGSLCKYGKI 342
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A F D+ +M+ YA +G L + +L + G P T+ +
Sbjct: 343 KEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVL 402
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTG 262
Y G + A+ + D G
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHG 426
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/294 (19%), Positives = 107/294 (36%), Gaps = 7/294 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA+ L+ ++ + + F S++ K G I + PD+ YN+ M
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V + A RV + M G + + + L + Y + G ++ +E+ +
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAG-IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
Y +I + G + + + +Y +++ L + A
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
FKE + DI N MI + R+E A++L R G P A T+ I +
Sbjct: 663 LFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLI 722
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G ++ A D + G P S + +R ++ ++ A +L
Sbjct: 723 KEGLVEEAEDMFSSMQNAG------CEPDSRLLNHVVRELLKKNEIVRAGAYLS 770
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 36/231 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA + + M + + + + +L+ Y K G ++ ++ +EM I P + YN+
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A+ EM G +A + T+S + + F++A KEL N
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESG-IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMN 671
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ +I QT + E ++ A+IS ++ V
Sbjct: 672 VKIDIITLNTMIAGMFQTRRVEEAKDLF----------ASISRSGLVPCAV--------- 712
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
TY I +TN++ KEG +E AE++ + G +P+++
Sbjct: 713 -----------TYSIMITNLI-----KEGLVEEAEDMFSSMQNAGCEPDSR 747
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/237 (16%), Positives = 88/237 (37%), Gaps = 1/237 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA + +M++ + + + +++ + G + +M ++PD Y Y+
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A+ +I E+ +G + D F ++ + + G A+ N
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNG-MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H D Y L+ Y G + + R++ ++ A + Y ++ + +
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
F+E + N++I + GR A+ G N T+ I
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSI 646
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 7/269 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSI-MPDSYTYNVWMRAL 66
LL+ K+ L ++ FN + + K+G E A+++EMK SSI P+ TY+ M L
Sbjct: 177 LLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGL 236
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A + EEM ++ D T++ L + + G ++A++ ++ +++ +
Sbjct: 237 CESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPN 296
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y L++ + + G L E + +++ + Y +I + A +
Sbjct: 297 VFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLE 356
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
E + DI NV++ + EGR E A + R G N ++ I + + G
Sbjct: 357 EMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKG 416
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSET 275
D+ A++ L + RG +VP T
Sbjct: 417 DLDKALELL--GLTLSRG----FVPHHAT 439
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLR---LAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ I + ++G+L + + + ++ +++PN I+Y ++ L L A + F+
Sbjct: 193 FNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNL--ITYSTLMDGLCESGRLKEAIELFE 250
Query: 187 EWESGCATY-DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
E S D NV+I ++ G+++ A+++ E + G PN + + +
Sbjct: 251 EMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKE 310
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 305
G ++ A+D E+ + G K TI + +F + +D A LE +K+
Sbjct: 311 GRLEEAMDAFEEM----KIFGLKQDTVGYTI--LINYFCRFGRIDEAMALLEEMKETKCK 364
Query: 306 LGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVSEASKKL-LEAIC 351
+ L+R + GRT ML RL E + +++AS ++ L ++C
Sbjct: 365 ADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLC 413
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A+ ++E MK + +++LM+ + K G E+ +EMK + D+ Y +
Sbjct: 278 VDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTI 337
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ I A ++EEMK + + AD T + L + G E+A L L +
Sbjct: 338 LINYFCRFGRIDEAMALLEEMK-ETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSE 396
Query: 122 NAHRDLSAYQFLITLYGQTGNL 143
+ + ++Y+ ++ Q G+L
Sbjct: 397 GIYLNKASYRIVLNSLCQKGDL 418
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 95/252 (37%), Gaps = 4/252 (1%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
++ +N L+ ++ G ++ I++ MK++ P+ + Y+ M + A E
Sbjct: 262 ALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFE 321
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
EMK G + D ++ L + + G ++A L+E++ D+ L+ +
Sbjct: 322 EMKIFG-LKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGE 380
Query: 141 GNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
G E + L SY ++ L DL A + S +
Sbjct: 381 GRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATS 440
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
N ++ K G ++A G P +W + ++ R + LA + L++
Sbjct: 441 NELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELTA 500
Query: 261 TGRGDGGKWVPS 272
D +VPS
Sbjct: 501 NECED---FVPS 509
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 9/249 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L ++M E N+ + + +N ++ + K G+ K ++ +M ++PD+YTY + +L
Sbjct: 528 LFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLC 587
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ + A++ I+++ R+ + +S L Y + G A +E+ R DL
Sbjct: 588 STGRVCEAKKFIDDLHRE-HFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDL 646
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI + + S V+ + +++ + Y +MI +K F
Sbjct: 647 VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMID---GYSKAGSVKKAFGI 703
Query: 188 W----ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
W + GC T +I +I K G ++ AE L + + PN T+ F D+
Sbjct: 704 WDIMIDEGC-TPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLA 762
Query: 244 RNGDMKLAV 252
R G M+ AV
Sbjct: 763 REGSMEKAV 771
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 120/321 (37%), Gaps = 7/321 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E ++++M EL + +SL+ + G ++ +K MP + YN
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNAL 372
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +L AE + +EM G A D T+S L + G + A L ++
Sbjct: 373 INSLCKDGKFDEAELLFKEMGEKGLCAND-VTYSILIDSFCRRGKLDTAIHFLGKMIMAG 431
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + + GNLS + + +SY ++I N L A
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAF 491
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + E + +I A + R+ +A L + + PN T+ + + +
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGH 551
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G+ A + L + + G VP + T R + V A+ F++ L +
Sbjct: 552 CKEGNTVKAFELLNQMVQKG------LVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE 605
Query: 303 VDDLGVEVFEPLIRTYAAAGR 323
L + L+ Y GR
Sbjct: 606 HFKLNEMCYSALLHGYCKEGR 626
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/259 (16%), Positives = 105/259 (40%), Gaps = 2/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ ++ + + + M +++L+ Y K G + +EM + D Y V +
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
D S +++ M D R+ D ++++ Y +AG +KA + +
Sbjct: 654 DGTIKEQDTSAVFGLLKNM-HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGC 712
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ Y LI + G + + +W+ + ++ +++Y + L + A +
Sbjct: 713 TPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQ 772
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ G + N+++ + K GR+E A +L + P+ T+
Sbjct: 773 LHNDMLKGLLANTVSY-NILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCC 831
Query: 244 RNGDMKLAVDCLEKAIDTG 262
R G++ A++ + ++ G
Sbjct: 832 RRGNLDGAIEFWDTMLNKG 850
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 97/244 (39%), Gaps = 38/244 (15%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + ++M + L + + + SL++ Y G + + EM I P++YT+ +
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
AL N ++ A R+ +EM + + + T++ + + + G KA L ++ +
Sbjct: 515 ALFRANRMTDAFRLFDEM-LEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLV 573
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y+ LI+ TG + E + L R F LN E
Sbjct: 574 PDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFK-------LN--------------EM 612
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
C+ + ++ Y KEGRL +A + +RG D + + + D +
Sbjct: 613 CY---------------SALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTI 657
Query: 244 RNGD 247
+ D
Sbjct: 658 KEQD 661
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 91/240 (37%), Gaps = 6/240 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T LL+ M + L + + S++ Y+K G +K I M P+ TY
Sbjct: 662 TSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTT 721
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L + AE + +EM + T+ G EKA + ++ +
Sbjct: 722 LINELCKAGLMDKAELLWKEMLVSNS-TPNHVTYCCFLDHLAREGSMEKAVQLHNDML-K 779
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+ +Y L+ + + G + E ++ + FP+ I+Y +I +L
Sbjct: 780 GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDC--ITYSTIIYQCCRRGNLD 837
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
GA + + + D N +I G L A EL++ RRG PN T + S
Sbjct: 838 GAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLS 897
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 9/325 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E + LL +MK+ L + +N+++ K G K ++EM + PD TYN
Sbjct: 293 MFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYN 352
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + ++ AE+++E+ R G +A + T++ L Y + G + KA L E+
Sbjct: 353 TLINHFCSRGEVEEAEKLLEQTIRRG-LAPNKLTYTPLVHGYCKQGEYTKATDYLIEMST 411
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAFPNTANISYLNMIQVLVNLKDLP 179
D+ +Y LI G + I R + ANI Y ++ L L
Sbjct: 412 SGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANI-YNVLMNGLFKKGKLS 470
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A+ E D V ++ + + G L+ A++L + +G DP + +
Sbjct: 471 MAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMI 530
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ ++G M A+ C++K VP T T + + ++ +++ ++
Sbjct: 531 KGFSKSGMMDNAILCIDKM------RRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLM 584
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRT 324
K V + LI Y G T
Sbjct: 585 VKQNCKPNVVTYTSLINGYCRKGET 609
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 7/298 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+AE LLE+ L + + + L+ Y K G K + EM S + D +Y
Sbjct: 364 VEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGA 423
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L ++ A + + M G + D ++ L + + G A+ L E+ ++
Sbjct: 424 LIHGLVVAGEVDTALTIRDRMMNRG-ILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQ 482
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N D Y L+ + + GNL E ++++ + + + Y MI+ + A
Sbjct: 483 NIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNA 542
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
C + DI + +I Y K+ + ++ ++ PN T+ +
Sbjct: 543 ILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLING 602
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
Y R G+ K+A EK R G K PS T + F +E + A + E++
Sbjct: 603 YCRKGETKMA----EKLFSMMRSHGLK--PSVVTYSILIGSFCKEAKLGKAVSYFELM 654
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 95/241 (39%), Gaps = 7/241 (2%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEM----KASSIMPDSYTYNVWMRALAAVNDISGA 75
S+ NSL+ L K E + EM I D+YT ++ ++ L I
Sbjct: 168 STYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDG 227
Query: 76 ERVIEEMKRDGRVAADWTTFSN-LASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
++IE R G+ F N L Y + G E A + K+L+ + L + L+
Sbjct: 228 IKLIES--RWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLV 285
Query: 135 TLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 194
+ + G + + ++ + Y N+I L A+ KE C
Sbjct: 286 NGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCE 345
Query: 195 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 254
D+ N +I + G +E AE+L E+ RRG PN T+ Y + G+ A D
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405
Query: 255 L 255
L
Sbjct: 406 L 406
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 106/280 (37%), Gaps = 45/280 (16%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA L +M L + + +L+ G + I M I+PD+ YNV M
Sbjct: 401 KATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLM 460
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL----- 118
L +S A+ ++ EM D +A D ++ L ++ G ++A++ + +
Sbjct: 461 NGLFKKGKLSMAKVMLTEM-LDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGL 519
Query: 119 ----------------------------ENRNAHR--DLSAYQFLITLYGQTGNLSEVYR 148
+ R AH D+ + +I Y + N++ V +
Sbjct: 520 DPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLK 579
Query: 149 IWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
I+ + + PN ++Y ++I + AEK F S + +++IG+
Sbjct: 580 IFGLMVKQNCKPNV--VTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGS 637
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ KE +L A E PN + +YL NG
Sbjct: 638 FCKEAKLGKAVSYFELMLINKCTPNDAAF-----HYLVNG 672
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 146/364 (40%), Gaps = 32/364 (8%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + +E+MK L + + ++ L+ Y KT E + +E K + Y+ +
Sbjct: 307 ALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIH 366
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A ++ AE ++ EM+ DG + A + ++ Y A +K + L+
Sbjct: 367 AHCQSGNMDRAEELVREMEEDG-IDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFR 425
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ +Y LI LY + G + + + + + N +Y +I ++L D A
Sbjct: 426 PSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSI 485
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F++ D + N+++ A+ K G ++ A + ER ++ P+ +T+ + +
Sbjct: 486 FEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAV 545
Query: 245 NGDMKLAVDCL----------------------------EKAIDT-GRGDGGKWVPSSET 275
GDMK A+D L E+A+ + P+ T
Sbjct: 546 AGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHT 605
Query: 276 IRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM--LRRLK 333
MR + D+ A + +K++ L V ++E L+R +GR + R +
Sbjct: 606 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 665
Query: 334 MEKV 337
+K+
Sbjct: 666 FQKI 669
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 118/299 (39%), Gaps = 7/299 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F ++ YAK G A + M+A I P+++ + + A A D+ GA +EEMK
Sbjct: 256 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 315
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G + T+S L + Y + E A++ KE + + + + Y +I + Q+GN+
Sbjct: 316 SEG-LEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNM 374
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ R + + Y +M+ +D F+ + I +
Sbjct: 375 DRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCL 434
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I Y K G++ A + + G N KT+ + + ++ D A E I +G
Sbjct: 435 INLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSG- 493
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
P + F + ++D A E +KK F P+I +A AG
Sbjct: 494 -----LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAG 547
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 131/314 (41%), Gaps = 7/314 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
A A E M+ + ++ F SL+ YA + ++EMK+ + TY++
Sbjct: 270 HHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSIL 329
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ND A+++ +E K + +SN+ + ++G ++AE ++E+E
Sbjct: 330 IAGYGKTNDAESADKLFKEAKTK-LDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG 388
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y ++ Y + + ++ L+ + ISY +I + V + +P A
Sbjct: 389 IDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKAL 448
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE ES ++ + +++I + NA + E + G P+ + + + +
Sbjct: 449 AVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAF 508
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ G+M A+ E R + PS+ T R + F D+ A L++++++
Sbjct: 509 CKMGNMDRAIRIFE------RMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRS 562
Query: 303 VDDLGVEVFEPLIR 316
V + LI
Sbjct: 563 GCAPTVMTYNALIH 576
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 109/261 (41%), Gaps = 3/261 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++AE L+ +M+E + ++S+M Y +K + + +K P +Y
Sbjct: 375 DRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCL 434
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + A V +EM+ G + + T+S L + ++ F A +++
Sbjct: 435 INLYVKIGKVPKALAVSKEMESHG-IKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSG 493
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D + Y L+ + + GN+ RI+ ++ +N ++ +I+ D+ A
Sbjct: 494 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRAL 553
Query: 183 KCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
SGCA + N +I ++ ++E A + ++ G PN T+ I
Sbjct: 554 DTLDLMRRSGCAP-TVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRG 612
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y +GD+ A + K ++G
Sbjct: 613 YAASGDIGKAFEYFTKIKESG 633
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 123/298 (41%), Gaps = 7/298 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A ++ E M + L +N L+ + K G+ ++ I + MK + P + T+ +
Sbjct: 482 AFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIE 541
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A D+ A ++ M+R G A T++ L + E+A L ++
Sbjct: 542 GFAVAGDMKRALDTLDLMRRSG-CAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIA 600
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y ++ Y +G++ + + + ++ + Y +++ + A
Sbjct: 601 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 660
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E + + N++I +A+ G + A +L ++ + G PN T+ + + +
Sbjct: 661 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCK 720
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
GDM+ A + +++ D G P+ +T T ++ + + D A E +K A
Sbjct: 721 AGDMQRAENVIQEMADVG------LKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSA 772
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A A+ +M + ++ +N L+ +A+ G + ++++MK I P+ +T+ +
Sbjct: 655 QSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSY 714
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A D+ AE VI+EM G + + TF+ L + + L ++A + +E+++
Sbjct: 715 INACCKAGDMQRAENVIQEMADVG-LKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAG 773
Query: 123 AHRDLSAYQFLIT 135
D +AY L+T
Sbjct: 774 LKPDEAAYHCLVT 786
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA K+KE L + +L+ K+G + A+ +EM I +++ YN+ +
Sbjct: 621 KAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 680
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A D+ A ++++MK DG + + TF++ + +AG ++AE ++E+ +
Sbjct: 681 DGWARRGDVWEAADLMKQMKEDG-IPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGL 739
Query: 124 HRDLSAYQFLI 134
++ + LI
Sbjct: 740 KPNVKTFTTLI 750
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 135/320 (42%), Gaps = 44/320 (13%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E L+KM + + + + +NS++ K +K ++ M S +MPD TYN +
Sbjct: 101 EGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
+ A +++M+ DG V D T+++L + G +A + + R
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDG-VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP 219
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
D++ Y L+ Y G L E++ + L L N + ++
Sbjct: 220 DITTYGTLLQGYATKGALVEMHGL---LDLMVRNGIHPNH-------------------- 256
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
V ++++ AYAK+ ++E A + + R++G +PNA T+ D ++
Sbjct: 257 ------------YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKS 304
Query: 246 GDMKLAVDCLEKAIDTG-RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
G ++ A+ E+ ID G R D + ++ F + + E E FLE+L + +
Sbjct: 305 GRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE------ELFLEMLDRGI- 357
Query: 305 DLGVEVFEPLIRTYAAAGRT 324
L F +I ++ GR
Sbjct: 358 CLSTIFFNSIIDSHCKEGRV 377
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 108/276 (39%), Gaps = 10/276 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+KA +L M + + M +NS++ + +G P++ +++M++ + PD TYN
Sbjct: 132 VDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNS 191
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M L + A ++ + M + G + D TT+ L Y G + L +
Sbjct: 192 LMDYLCKNGRCTEARKIFDSMTKRG-LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 250
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
H + + L+ Y + + E ++ +R N ++Y +I VL + A
Sbjct: 251 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDA 310
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F++ D V N +I + + E AEEL RG + + D
Sbjct: 311 MLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDS 370
Query: 242 YLRNG---------DMKLAVDCLEKAIDTGRGDGGK 268
+ + G D+ + + I GR D K
Sbjct: 371 HCKEGRVIESGKLFDLMVRIGVKPDIITLGRNDEAK 406
>gi|302772380|ref|XP_002969608.1| hypothetical protein SELMODRAFT_91676 [Selaginella moellendorffii]
gi|300163084|gb|EFJ29696.1| hypothetical protein SELMODRAFT_91676 [Selaginella moellendorffii]
Length = 408
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS-IMPDSYTYN 60
+ A L+ + ++N +S+ N +MT K G PE + ++KA+ + D TYN
Sbjct: 207 VDAAHTLVRDLMKMNFYPNSLTLNVIMTRLNKVGKPEVALELYYDLKAAGGFVHDLITYN 266
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + L V + A + EE+K + R+ D T++ + + G + +KE+E
Sbjct: 267 IIIDLLGKVGKVDEAWKAFEELKLEQRLVPDHYTYNTIVVRMAKVGRLQACFELIKEMEG 326
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
RN D S+Y L+ +G+ G++ + + R ++ + + +N +Q LVN
Sbjct: 327 RNVSLDRSSYCNLVEAFGRAGHIDQACSMLREMK----ASGHSPQMNTLQTLVN 376
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N ++ K G ++ +EM PD YTYN M + ++ + +V EEM
Sbjct: 89 YNVVINSLCKLGKVDEALKYTREMSEKGYPPDVYTYNFVMEGIGNTTNLEASAKVFEEMV 148
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ + + TF+ L + +AG +A ++++ + A++ L+ +G++G +
Sbjct: 149 AN-KCQPNIVTFNVLLDTFCKAGKTAQAADLVRKMVSYGCSPGERAFRILMDAFGRSGEV 207
Query: 144 SEVYRIWRSL-RLAF-PNTANISYLNMIQVLVNLKDLP--GAEKCFKEWESGCATYDIRV 199
+ + R L ++ F PN+ LN+I +N P E + +G +D+
Sbjct: 208 DAAHTLVRDLMKMNFYPNSLT---LNVIMTRLNKVGKPEVALELYYDLKAAGGFVHDLIT 264
Query: 200 TNVMIGAYAKEGRLENA----EELKERAR 224
N++I K G+++ A EELK R
Sbjct: 265 YNIIIDLLGKVGKVDEAWKAFEELKLEQR 293
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 13/228 (5%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN L+ + K G + ++++M + P + + M A ++ A ++ ++
Sbjct: 159 FNVLLDTFCKAGKTAQAADLVRKMVSYGCSPGERAFRILMDAFGRSGEVDAAHTLVRDLM 218
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH----RDLSAYQFLITLYGQ 139
+ T L I K E AL+ + A DL Y +I L G+
Sbjct: 219 KMNFYPNSLT----LNVIMTRLNKVGKPEVALELYYDLKAAGGFVHDLITYNIIIDLLGK 274
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF---KEWESGCATYD 196
G + E ++ + L+L + N I +V + + + CF KE E + D
Sbjct: 275 VGKVDEAWKAFEELKLEQRLVPDHYTYNTI--VVRMAKVGRLQACFELIKEMEGRNVSLD 332
Query: 197 IRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
++ A+ + G ++ A + + G P T + ++ R
Sbjct: 333 RSSYCNLVEAFGRAGHIDQACSMLREMKASGHSPQMNTLQTLVNHARR 380
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTA 161
V+AG F+ K + D AY +I + G + E + R + +P
Sbjct: 62 VKAGCFQVVPLIFKNMIWAGNKPDRFAYNVVINSLCKLGKVDEALKYTREMSEKGYPPDV 121
Query: 162 NISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+Y +++ + N +L + K F+E + +I NV++ + K G+ A +L
Sbjct: 122 -YTYNFVMEGIGNTTNLEASAKVFEEMVANKCQPNIVTFNVLLDTFCKAGKTAQAADLVR 180
Query: 222 RARRRGADPNAKTWEIFSDYYLRNGDMKLA 251
+ G P + + I D + R+G++ A
Sbjct: 181 KMVSYGCSPGERAFRILMDAFGRSGEVDAA 210
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 122/257 (47%), Gaps = 1/257 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA ++E M E + + + L+ K G+ ++++M+ + ++ TYN
Sbjct: 2 KKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSL 61
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+R L +++ + ++++++ G V ++T L + Y E G+ E A + L E+ +
Sbjct: 62 VRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNE-AMKLLDEIIAKG 120
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+L +Y L+T + G E R +R L N +SY +++ L + A
Sbjct: 121 WQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEAN 180
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E +S + + N++IG+ A GR+E+A E+ + R P+A T+ +
Sbjct: 181 QLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHL 240
Query: 243 LRNGDMKLAVDCLEKAI 259
+ G + L + CL++ I
Sbjct: 241 CKEGKLDLVIKCLDQMI 257
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 57/303 (18%), Positives = 117/303 (38%), Gaps = 9/303 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+A + + + +N ++ G E+ ++ EM + P TYN+
Sbjct: 141 TEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNI 200
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +LA I A V++EM R TT++ + + + G + + L ++ +
Sbjct: 201 LIGSLAFHGRIEHAFEVLDEMVR-ASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHH 259
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + + + L Q G + E + I ++L ++ + Y +I L + A
Sbjct: 260 RCNPNEGTFNAIAVLCKQ-GRVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPA 318
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E D + +I EG L+ A E+ P +
Sbjct: 319 FQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILG 378
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD-GAEGFLEILK 300
+ ++G L++D LE ++ G + P+ T + E++ + AE E+L
Sbjct: 379 FCKSGRTDLSLDILEMMVEKG------YTPNETTYTIIVEGIAHEEEKELAAEVLKELLL 432
Query: 301 KAV 303
+ V
Sbjct: 433 RQV 435
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 3/245 (1%)
Query: 4 KAEALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
KA+A+ M+ L + + +NS+M Y +G EK I ++M + I PD TYN
Sbjct: 58 KAQAMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNS 117
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M L + A ++ + M + G + D TT+ L Y G + L +
Sbjct: 118 LMDYLCKNGKCTEARKIFDSMVKRG-LKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D + LI Y + + EV ++ +R ++Y +I L L L A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F++ T ++ V +I A + E AEEL +G +PN + D
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296
Query: 242 YLRNG 246
+ G
Sbjct: 297 LCKEG 301
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 129/309 (41%), Gaps = 27/309 (8%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+++ K G +K EM + PD+ TYN + AL+ + A V+ M
Sbjct: 14 YNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM- 72
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
V + T++++ Y +G EKA +++ + D+ Y L+ + G
Sbjct: 73 ----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQ------VLVNLKDLPGAEKCFKEWESGCATY 195
+E +I+ S+ R P+ +Y ++ LV + DL ++G
Sbjct: 129 TEARKIFDSMVKRGLKPDIT--TYGTLLHGYASKGALVEMHDLLALM-----VQNG-MQL 180
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D V N++I AY K+ +++ + + R++G PNA + D + G + A+
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
E+ ID +G V + I + + EK E EIL + ++ + F ++
Sbjct: 241 EQMID--KGLTPNVVVYTSLIHALCTYDKWEK---AEELIFEILDQGINP-NIVFFNTIL 294
Query: 316 RTYAAAGRT 324
+ GR
Sbjct: 295 DSLCKEGRV 303
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 107/284 (37%), Gaps = 11/284 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+EKA + KM + + +NSLM K G + I M + PD TY
Sbjct: 93 SEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGT 152
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A+ + ++ M ++G + D F+ L Y + ++ ++ +
Sbjct: 153 LLHGYASKGALVEMHDLLALMVQNG-MQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQ 211
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+ Y+ +I + G L + + + + PN + Y ++I L
Sbjct: 212 GLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNV--VVYTSLIHALCTYDKWE 269
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE+ E +I N ++ + KEGR+ +++L + G +P+ T+
Sbjct: 270 KAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLI 329
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
D Y G M A+ L + G P S T T + +
Sbjct: 330 DGYCLAGKMDGAMKLLTGMVSVG------LKPDSVTYSTLINGY 367
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 93/231 (40%), Gaps = 1/231 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL M + + FN L+ Y K +++ + +M+ + P++ Y + L
Sbjct: 169 LLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLC 228
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ + A E+M G + + +++L +EKAE + E+ ++ + ++
Sbjct: 229 KLGRLDDAMLNFEQMIDKG-LTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNI 287
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ ++ + G + E +++ L N I+Y +I + GA K
Sbjct: 288 VFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTG 347
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
S D + +I Y K R+E+A L + G +P+ T+ I
Sbjct: 348 MVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNII 398
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/252 (17%), Positives = 96/252 (38%), Gaps = 1/252 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ KM++ L +++ + +++ K G + ++M + P+ Y + AL
Sbjct: 204 VFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALC 263
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ AE +I E+ G + + F+ + + G ++++ L + + D+
Sbjct: 264 TYDKWEKAEELIFEILDQG-INPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDV 322
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y LI Y G + ++ + +++Y +I + + A FKE
Sbjct: 323 ITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKE 382
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
ES DI N+++ + R A+EL R G T+ I + +
Sbjct: 383 MESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNS 442
Query: 248 MKLAVDCLEKAI 259
+ + C +
Sbjct: 443 LMMHFGCFRTYV 454
>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 426
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S MPD YN
Sbjct: 24 LFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGFMPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V + ++S L ++YVE F +A E+
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAG-VMPNTASYSTLLTMYVENKKFLEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ +R +SY +++V + +
Sbjct: 143 IKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PN+ T+
Sbjct: 203 AIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAMLFQKLRSSG 284
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 168
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA--SYSTL 120
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 229 DPNAKTWEIFSDYYLRNGDMKL 250
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 47/232 (20%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P+S TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAY---------------------------------QFLITLYGQTGNLSEVYRI 149
RD++ + +L + Y + GN+ EV+
Sbjct: 321 IPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIYLFSKYKKYGNVVEVFDK 380
Query: 150 WRSLRLAFPNTANISYLNMIQVLVN----LKDLPGAEKCFKEW-ESGCATYD 196
R L FP++ N+I +++N L + A + E E GC D
Sbjct: 381 MRGLGY-FPDS------NVIALVLNAYGKLHEFDKANDVYMEMQEVGCVFSD 425
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 41/269 (15%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
A ++KM+EL S + FN L+ L++ + IP I+ +MKA + TYN+ M+
Sbjct: 179 AYMKKMRELGHPISYLVFNRLIILHSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIE 238
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A ++I G +V EMK+ +V + ++ LA+ + A L+ AE ++ +E +
Sbjct: 239 ANEHNIEGLVKVFGEMKQQ-QVEPNEVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNN 297
Query: 127 LSAYQFLITLYGQTGNLSE-------------------------VYRIWRSLR-LAFPNT 160
S LI LYG G ++ +++ W +L+ L
Sbjct: 298 WSTLDVLIILYGYLGKPTDLEPLVRNKVKKRVEINRAIQFNDICLFQTWEALKTLELGKG 357
Query: 161 ANIS------------YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
IS L+++++ D+ AEK F+E ++ T V N +I AY
Sbjct: 358 LTISTRIRKSIPWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYV 417
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEI 237
K + L R GA P+A+T+ +
Sbjct: 418 KAKVYD--PNLLRRMILGGARPDAETYSL 444
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 134/346 (38%), Gaps = 30/346 (8%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F++LM K + + + +++EM++ + P+ YTY + +R L I A R+++ M
Sbjct: 232 FSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD 291
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
DG D T++ L A + A ++++ + D Y L+ + G+L
Sbjct: 292 DDG-CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHL 350
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+V +IW + +++ ++ L + A ++ N +
Sbjct: 351 DKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTL 410
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA----- 258
I + RL++A +L G +P A T+ + DY+ ++G A++ EK
Sbjct: 411 ISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGI 470
Query: 259 --------------IDTGRGDGGK----------WVPSSETIRTFMRHFEQEKDVDGAEG 294
+ GR K P S T M+ + + VD A
Sbjct: 471 APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIK 530
Query: 295 FLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 340
L + K + V V LI T AGR +ME++ ++
Sbjct: 531 LLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLA 576
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 110/250 (44%), Gaps = 1/250 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A + LEKM+E ++ +N L+ ++G ++ + + M + + P T++ M
Sbjct: 177 QAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALM 236
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A +I ++EEM+ G + + T++ + G ++A R +K +++
Sbjct: 237 VASGKRRNIKTVMGLLEEMESMG-LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGC 295
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y LI L + ++ ++ + ++Y+ ++ + L EK
Sbjct: 296 GPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEK 355
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ E E+ D+ +++ A K GR+ A +L + R++G PN T+ L
Sbjct: 356 IWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLL 415
Query: 244 RNGDMKLAVD 253
R + A+D
Sbjct: 416 RANRLDDALD 425
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 42/299 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L M+ L + ++ + L+ + K+GHP K ++MKA I P+ N
Sbjct: 421 DDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNAS 480
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ +LA + + A+ + E+K G +A D T++ + Y + G ++A + L E+
Sbjct: 481 LYSLAEMGRLGEAKAMFNELKSSG-LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ 539
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ LI + G + E ++++ + +N+ +V
Sbjct: 540 CEPDVIVINSLIDTLYKAGRVEEAWQMF----------CRMEEMNLAPTVV--------- 580
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
TY N+++ KEG+++ A +L E G PN T+ D
Sbjct: 581 -----------TY-----NILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCL 624
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+N ++ LA+ K P T T + F ++ + A +KK
Sbjct: 625 CKNDEVDLALKMFYKMTTM------NCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKK 677
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 3/231 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L KMK + + + +L+ ++ GH +K+ I EM+A PD T+ +
Sbjct: 316 DDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTIL 375
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL I+ A +++ M++ G V + T++ L S + A + A +E+
Sbjct: 376 VNALCKAGRINEAFDLLDTMRKQG-VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNM-IQVLVNLKDLPGA 181
Y LI +G++G+ + + ++ A NI N + L + L A
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMK-ARGIAPNIVACNASLYSLAEMGRLGEA 493
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNA 232
+ F E +S D N+M+ Y+K G+++ A +L + +P+
Sbjct: 494 KAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDV 544
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 93/234 (39%), Gaps = 1/234 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E A L E+MK + +NSL+ + K+G ++ + EM P++ TYN+
Sbjct: 806 VEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNM 865
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L N + A + + G + TF L +++G + A + +
Sbjct: 866 VISNLVKSNRLDKAMDLYYNLV-SGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHY 924
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + Y L+ YG+ G++ ++ + SY ++ +L + A
Sbjct: 925 GCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDA 984
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
F++ + D+ N+MI + R E A L + RG P+ T+
Sbjct: 985 LHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTY 1038
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 100/245 (40%), Gaps = 11/245 (4%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+P ++ + KT + ++ K + P YN+ + V+++ A + EE
Sbjct: 758 IPIIKVLCKHKKTSVARNV--FVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEE 815
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
MK G A D T+++L + ++G + E+ R + Y +I+ ++
Sbjct: 816 MKSAG-CAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSN 874
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR--- 198
L + ++ +L + ++ +I L+ L A + F G Y R
Sbjct: 875 RLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMF----DGMVHYGCRPNS 930
Query: 199 -VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
+ N+++ Y K G ++ A E +R + G P+ K++ I D G + A+ EK
Sbjct: 931 AIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEK 990
Query: 258 AIDTG 262
G
Sbjct: 991 LKQAG 995
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 7/221 (3%)
Query: 19 FSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAE 76
FS P F L+ K+G + + M P+S YN+ + + + A
Sbjct: 891 FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTAC 950
Query: 77 RVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITL 136
+ M ++G + D +++ L I AG + A ++L+ DL AY +I
Sbjct: 951 EFFKRMVKEG-IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMING 1009
Query: 137 YGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCAT 194
G++ E ++ + R P+ +Y ++I L + + A K ++E +
Sbjct: 1010 LGRSQRTEEALSLFHEMQNRGIVPDL--YTYNSLILNLGIVGMIEEAGKIYEELQFIGLK 1067
Query: 195 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
++ N +I Y G E A + ++ G DPN T+
Sbjct: 1068 PNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 44 IQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV 103
+++K + + PD YN+ + L A + EM+ G + D T+++L
Sbjct: 988 FEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG-IVPDLYTYNSLILNLG 1046
Query: 104 EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNTA 161
G+ E+A + +EL+ ++ Y LI Y +GN Y I++ + + PNT
Sbjct: 1047 IVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTG 1106
Query: 162 NISYL 166
+ L
Sbjct: 1107 TFAQL 1111
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A EK+K+ L + +N ++ ++ E+ ++ EM+ I+PD YTYN
Sbjct: 981 VDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNS 1040
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ L V I A ++ EE++ G + + T++ L Y +G E A K++
Sbjct: 1041 LILNLGIVGMIEEAGKIYEELQFIG-LKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096
>gi|125583699|gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japonica Group]
Length = 482
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 6/262 (2%)
Query: 4 KAEALLEKMKELNLGFSSM-PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
KA EKMK ++ ++ +N L+ +A+ G +++ + +++ S + PD YTYN
Sbjct: 165 KALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGV 224
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A I+ E V+ MK + + D TF+ L Y F+K E+ K L
Sbjct: 225 MDAYGKNGMITEMESVLVRMKSN-QCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSK 283
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-PNTANISYLNMIQVLVNLKDLPG 180
+ +IT YG+ + + + + F PN L M+ + +
Sbjct: 284 EKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDC--VSR 341
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F E S + N M+ AY G A++L + ++GA P+A T+++
Sbjct: 342 ARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYK 401
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y + D KL L++ G
Sbjct: 402 AYTKANDKKLIQKLLKRMNSQG 423
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 92/239 (38%), Gaps = 11/239 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND----ISGAERVI 79
++ L+++ + G + +M+ S PD+ YN + D ++ A
Sbjct: 111 YSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTHLHSRDKSKALAKALGYF 170
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
E+MK R + T++ L + +AG ++ + K+L+ D+ Y ++ YG+
Sbjct: 171 EKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVMDAYGK 230
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
G ++E+ + ++ I++ +I + E+ FK
Sbjct: 231 NGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKEKPTHPT 290
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
N MI Y K E AE + ++ G PN T E Y DC+ +A
Sbjct: 291 FNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMY-------AYCDCVSRA 342
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 20/277 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMP--------FNSLMTLYAKTGHPEKIPAIIQEMKASSI 52
+ + ALL+K E+ F +P + SL+ YA+ E+ A++ +MKA+ +
Sbjct: 143 LGRQGPALLDKCLEV---FHDLPADSRTALSYTSLIAAYARNALHEEARALLDQMKAAGV 199
Query: 53 MPDSYTYNVWMRALAAVND----ISGAERVIEEMKRD--GRVAADWTTFSNLASIYVEAG 106
P + TYN + A A D + EM+ D V D TT++ L +
Sbjct: 200 APTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDVSPAVRPDLTTYNTLLAAAAVRS 259
Query: 107 LFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL 166
L ++AE L+ + D ++Y+ ++ + + G+LS V ++R + +YL
Sbjct: 260 LNDQAEMLLRAMLEAGVLPDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYL 319
Query: 167 NMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
+++ + A ++ ++ GCA V++ Y ++GR + EL R R
Sbjct: 320 GLMEAHTRVGATAEAVAVLRQMQADGCAP-TAATYRVLLDLYGRQGRFDGVRELF-REMR 377
Query: 226 RGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
P+ T+ + + G K V+ + TG
Sbjct: 378 TAVPPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTG 414
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 103/243 (42%), Gaps = 9/243 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP----EKIPAIIQEMK---ASSIM 53
+ E+A ALL++MK + ++ +N+++ A+ P + + + EM+ + ++
Sbjct: 183 LHEEARALLDQMKAAGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDVSPAVR 242
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
PD TYN + A A + AE ++ M G V D ++ ++ + AG +
Sbjct: 243 PDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAG-VLPDTASYRHIVDAFARAGDLSRVAE 301
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+E+ + D SAY L+ + + G +E + R ++ +Y ++ +
Sbjct: 302 LFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLLDLYG 361
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
G + F+E + D NV+ + G + EL R G +P+ +
Sbjct: 362 RQGRFDGVRELFREMRTAVPP-DTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDME 420
Query: 234 TWE 236
T E
Sbjct: 421 TCE 423
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 109/308 (35%), Gaps = 39/308 (12%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +A A+L +M+ ++ + L+ LY + G + + + +EM+ +++ PD+ TYNV
Sbjct: 331 TAEAVAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMR-TAVPPDTATYNV 389
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ +M R G + D T + + GL E A L +
Sbjct: 390 LFSVFGDGGFFKEVVELFHDMLRTG-IEPDMETCEGVLVACGQGGLHEDAREVLDYITKE 448
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVY---------------RIWRSLRLAFP-------- 158
AY L+ G E Y + SL F
Sbjct: 449 GMVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLANVFAKGGLFQEA 508
Query: 159 --------NTANI-----SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
N+A I S+ +I+ L A K + E D R ++
Sbjct: 509 ESIFSRMTNSAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLN 568
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AY G ++ ++E E + A P+ + + Y RN A D LE+ + T R
Sbjct: 569 AYCIAGVIDESKEQFEEIQSNMAVPSIIAYCMMLSLYARNDRWADAYDLLEE-MKTNRAS 627
Query: 266 GGKWVPSS 273
V +S
Sbjct: 628 STHQVIAS 635
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS-IMPDSYTY 59
M E+A M E+ + +NSL ++AK G ++ +I M S+ I + ++
Sbjct: 469 MYEEAYVAFNMMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMTNSAGIQKNKDSF 528
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + A + A + EM R R D + + + Y AG+ ++++ +E++
Sbjct: 529 DALIEAYCQGAQLDDAVKAYMEM-RKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIQ 587
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
+ A + AY +++LY + ++ Y + ++ ++ + +MIQ
Sbjct: 588 SNMAVPSIIAYCMMLSLYARNDRWADAYDLLEEMKTNRASSTHQVIASMIQ 638
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + TF+ L + + G + A K++ +++
Sbjct: 221 GLCKESKMDDANELFDEMLVKGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEH 339
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I +EGR +AE++ G P+A+T+ + + + +
Sbjct: 340 RKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 399
Query: 245 NGDM 248
GD+
Sbjct: 400 KGDV 403
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 229 DDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 288
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM G + D T++ L + G + A K + N
Sbjct: 289 IYGLCKKGDLKQAHHLIDEMSVKG-LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 347
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G RS+ AE
Sbjct: 348 IRLDEVAYTALISGLCQEG---------RSV--------------------------DAE 372
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E S D R ++I + K+G + +L + +R G P+ T+ +
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVL 428
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + + G + +++ L + Y+ G ++ R
Sbjct: 143 YFFNILMHRFCKDGDIRJAQSVFDAITKWG-LRPSVVSYNTLMNGYIRLGDLDEGFRLKS 201
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ D+ Y LI + + + ++ + + +++ +I
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ A + +K+ S + D+ N +I K+G L+ A L + +G P+ T+
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 321
Query: 237 IFSDYYLRNGDMKLAVD 253
D + GD+ A +
Sbjct: 322 TLIDGCCKEGDLDSAFE 338
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + FN+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 142 AQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLIN 201
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + TF+ L + + G + A K++ +++
Sbjct: 202 GLCKESKMDDANELFDEMLDKGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 260
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y L + G+L + + + + + I+Y +I D+ A +
Sbjct: 261 PDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEH 320
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D V +I +EGR +AE++ G PN T+ + + + +
Sbjct: 321 QKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCK 380
Query: 245 NGDM 248
GD+
Sbjct: 381 KGDV 384
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M + L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 210 DDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 269
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
L D+ A +I+EM G + D T++ L + G E A K + N
Sbjct: 270 TYGLCKKGDLKQAHDLIDEMSMKG-LKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQEN 328
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D Y LI+ Q G + ++ R +
Sbjct: 329 IRLDDVVYTALISGLCQEGRSVDAEKMLREM 359
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + + G + +F+ L + Y+ G ++ R
Sbjct: 124 YFFNILMHRFCKEGDIRLAQSVFDAITKWG-LRPSVVSFNTLMNGYIRLGDLDEGFRLKN 182
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
+ D+ Y LI + + + ++ + + PN +++ +I
Sbjct: 183 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPN--GVTFTTLIDGHCK 240
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N + K+G L+ A +L + +G P+ T
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 300
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GDM+ A +
Sbjct: 301 YTTLIDGCCKEGDMETAFE 319
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 13/320 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKAE L ++ + + ++ FN+LM + G + +I M + PD +YN
Sbjct: 429 EKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTL 488
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ I A ++++ + G + D T++ L Y +A + A +E+ +
Sbjct: 489 VDGHCLTGRIDEAAKLLDVIVSIG-LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKG 547
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y ++ QTG SE ++ S+ + NI N+I + L +
Sbjct: 548 LTPDVVTYNTILHGLFQTGRFSEAKELYLSM-INSRTQMNIYTYNII--INGLCKNNFVD 604
Query: 183 KCFKEWESGCA---TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
+ FK + S C+ DI N+MIGA K GR E+A +L G P+ +T+ + +
Sbjct: 605 EAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIA 664
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ ++ G ++ +D L A++ + G P+S + +R D++ A +L L
Sbjct: 665 ENLIKEGSLE-ELDELFSAME----ENGT-APNSRMLNALVRWLLHRGDINRAGAYLSKL 718
Query: 300 KKAVDDLGVEVFEPLIRTYA 319
+ L LI Y+
Sbjct: 719 DEKNFSLEASTTSMLISIYS 738
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/361 (18%), Positives = 127/361 (35%), Gaps = 44/361 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A+ + + M + + ++ + L+ Y G +++ ++QEM + PD Y Y
Sbjct: 217 MVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYA 276
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + L + A + + + R G + + T + L Y G + L +
Sbjct: 277 VLLDYLCKNGRCTEARNIFDSVIRKG-IKPNVTIYGILLHGYATEGSLSEMHSFLDLMVG 335
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D + + Y + + E I+ +R + ++Y +I L L +
Sbjct: 336 NGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDD 395
Query: 181 AEKCFKEWESGCATYDIRV-----------------------------------TNVMIG 205
A F + T DI V N ++
Sbjct: 396 AVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMC 455
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
+EGR+ A+ L + R G P+ ++ D + G + A L+ + G
Sbjct: 456 NLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIG--- 512
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
P T T + + + + +D A F E+L K + V + ++ GR
Sbjct: 513 ---LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTP-DVVTYNTILHGLFQTGRF 568
Query: 325 S 325
S
Sbjct: 569 S 569
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 100/264 (37%), Gaps = 6/264 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA---SSIMPDSYTY 59
E + LL +M E ++ L+ + E+ ++ M S P+ TY
Sbjct: 146 EATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTY 205
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ L + A+ V + M G V + T++ L Y+ G +++ + L+E+
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKG-VRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMS 264
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS-LRLAFPNTANISYLNMIQVLVNLKDL 178
D Y L+ + G +E I+ S +R I Y ++ L
Sbjct: 265 THGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTI-YGILLHGYATEGSL 323
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ D + N+M AYAK+ ++ A + ++ R++ PN T+
Sbjct: 324 SEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGAL 383
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTG 262
D + G + AV + ID G
Sbjct: 384 IDALCKLGRVDDAVLKFNQMIDEG 407
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 139/323 (43%), Gaps = 23/323 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
++A L KMKE+ L + + +N ++ +Y K G ++I ++ EM++ + D +T +
Sbjct: 232 KRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCST 291
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + A + + E+K +G T++++ ++ +AG++ +A LKE+E+
Sbjct: 292 VISACGREGMLDEARKFLAELKFNGYKPGT-VTYNSMLQVFGKAGIYTEALSILKEMEDN 350
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
N D Y L Y + G L E + ++ + PN I+Y +I
Sbjct: 351 NCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNA--ITYTTVIDAYGKAGRED 408
Query: 180 GAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + F + GCA ++ N ++ K+ R E+ ++ + G PN TW
Sbjct: 409 DALRLFSLMKDLGCAP-NVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 467
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ-EKDVDGAEGFLE 297
G L + + G + P +T T + + + +VD A+ + E
Sbjct: 468 LAVCSEEGKHNYVNKVLREMKNCG------FEPDKDTFNTLISAYARCGSEVDSAKMYGE 521
Query: 298 ILKKAVDDLGVEVFEPLIRTYAA 320
++K F P + TY A
Sbjct: 522 MVKSG--------FTPCVTTYNA 536
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 117/299 (39%), Gaps = 44/299 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L MK+L + +NS++ + K E + ++ EMK + P+ T+N
Sbjct: 408 DDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTM 467
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGL--------------- 107
+ + + +V+ EMK G D TF+ L S Y G
Sbjct: 468 LAVCSEEGKHNYVNKVLREMKNCG-FEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSG 526
Query: 108 --------------------FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
++ AE ++++ + + ++Y L+ Y + GN+ +
Sbjct: 527 FTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIE 586
Query: 148 RIWRSLR--LAFPNTANISYLNMIQVLVNLK--DLPGAEKCFKEWESGCATYDIRVTNVM 203
++ + + FP+ + L VL N K L G E+ F + + D+ V N M
Sbjct: 587 KVEKEIYDGHVFPSWILLRTL----VLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSM 642
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ +A+ A E+ G PN T+ D Y+R G+ A + L+ ++G
Sbjct: 643 LSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSG 701
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 124/295 (42%), Gaps = 11/295 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A L ++K ++ +NS++ ++ K G + +I++EM+ ++ PDS TYN
Sbjct: 301 MLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYN 360
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ VI+ M G V + T++ + Y +AG + A R +++
Sbjct: 361 ELAATYVRAGFLDEGMAVIDTMTSKG-VMPNAITYTTVIDAYGKAGREDDALRLFSLMKD 419
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDL 178
++ Y ++ + G+ +V ++ ++L PN A ++ M+ V
Sbjct: 420 LGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRA--TWNTMLAVCSEEGKH 477
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E ++ D N +I AYA+ G ++ ++ + G P T+
Sbjct: 478 NYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNAL 537
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
+ R GD K A E I R G K P+ + + + + +V G E
Sbjct: 538 LNALARRGDWKAA----ESVIQDMRTKGFK--PNENSYSLLLHCYSKAGNVKGIE 586
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 130/298 (43%), Gaps = 7/298 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++L++M++ N S+ +N L Y + G ++ A+I M + +MP++ TY +
Sbjct: 339 EALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVI 398
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A A R+ MK G A + T++++ ++ + E + L E++
Sbjct: 399 DAYGKAGREDDALRLFSLMKDLG-CAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGC 457
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ + + ++ + + G + V ++ R ++ ++ +I + K
Sbjct: 458 APNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAK 517
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ E T + N ++ A A+ G + AE + + R +G PN ++ + Y
Sbjct: 518 MYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYS 577
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ G++K ++ +EK I G PS +RT + + + + G E + L+K
Sbjct: 578 KAGNVK-GIEKVEKEIYDGH-----VFPSWILLRTLVLTNHKCRHLRGMERAFDQLQK 629
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 133/334 (39%), Gaps = 20/334 (5%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL++M+ L +++++ + G ++ + E+K + P + TYN ++
Sbjct: 273 LLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFG 332
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ A +++EM+ D D T++ LA+ YV AG ++ + + ++ +
Sbjct: 333 KAGIYTEALSILKEME-DNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNA 391
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD-LPGAEKCFK 186
Y +I YG+ G + R++ SL N+ N + ++ K K
Sbjct: 392 ITYTTVIDAYGKAGREDDALRLF-SLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLC 450
Query: 187 EWE-SGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
E + +GCA R T N M+ ++EG+ ++ + G +P+ T+ Y R
Sbjct: 451 EMKLNGCAPN--RATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYAR 508
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
G + + + +G + P T + + D AE ++ ++
Sbjct: 509 CGSEVDSAKMYGEMVKSG------FTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGF 562
Query: 305 DLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVE 338
+ L+ Y+ AG + EKVE
Sbjct: 563 KPNENSYSLLLHCYSKAGNVKGI-------EKVE 589
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KA +L + E L + +N LM LY + G K +++ ++ S PD +YN
Sbjct: 651 MFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYN 710
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + A V+ EM G + T++ S Y LF++A ++ +
Sbjct: 711 TVIKGFCRKGLMQEAIGVLSEMTTKG-IQPTIVTYNTFLSGYAGMELFDEANEVIRFMIE 769
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSE 145
N Y+ L+ Y + G E
Sbjct: 770 HNCRPSELTYKILVDGYCKAGKYEE 794
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 78/223 (34%), Gaps = 35/223 (15%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ +++ YA+TG ++ + +MK + P TYNV +
Sbjct: 218 YTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVY----------------- 260
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G++ W ++ L E+ ++ D +I+ G+ G L
Sbjct: 261 --GKMGRSW----------------DRILELLDEMRSKGLELDEFTCSTVISACGREGML 302
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + L+ ++Y +M+QV A KE E D N +
Sbjct: 303 DEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNEL 362
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
Y + G L+ + + +G PNA T+ D Y + G
Sbjct: 363 AATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAG 405
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A + E+MK + +N+L+ +Y K+ P++ ++ EM+ + P TYN
Sbjct: 294 LHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYN 353
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + A + +M G D T++ L S + AG E A +E+ N
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRN 412
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + I +YG G ++ +I+ + + + +++ ++ V
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
FKE + + N +I AY++ G E A + R G P+ T+
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 109/259 (42%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K +L+EKMK + + +N+L+T + ++ + +EMKA+ D TYN +
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALL 321
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ A +V+ EM+ +G + T+++L S Y G+ ++A ++ +
Sbjct: 322 DVYGKSHRPKEAMKVLNEMELNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y L++ + + G + I+ +R A ++ I++ N K
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMK 440
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F E + DI N ++ + + G + + +R G P +T+ Y
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 244 RNGDMKLAVDCLEKAIDTG 262
R G + A+ + +D G
Sbjct: 501 RCGSFEQAMTVYRRMLDAG 519
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 129/322 (40%), Gaps = 14/322 (4%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L ++E + SL++ +A +G + + ++M+ P TYNV +
Sbjct: 192 AANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILN 251
Query: 65 ALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ N I+ ++E+MK DG +A D T++ L + L ++A + +E++
Sbjct: 252 VFGKMGTPWNKITS---LVEKMKSDG-IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y L+ +YG++ E ++ + L + + ++Y ++I L
Sbjct: 308 AGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + + D+ ++ + + G++E+A + E R G PN T+ F
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIK 427
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y G VD + K D G P T T + F Q G + +K
Sbjct: 428 MYGNRGKF---VDMM-KIFDEINVCG--LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
+A E F LI Y+ G
Sbjct: 482 RAGFVPERETFNTLISAYSRCG 503
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 48/338 (14%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + ++MK FN+L++ Y++ G E+ + + M + + PD TYN
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY---------------VEA 105
+ ALA +E+V+ EM+ DGR + T+ +L Y V +
Sbjct: 529 TVLAALARGGMWEQSEKVLAEME-DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 106 GLFE--------------------KAERALKELENRNAHRDLSAYQFLITLYGQ---TGN 142
G+ E +AERA EL+ R D++ ++++YG+ G
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGK 647
Query: 143 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
+EV + R P+ A +Y +++ + D +E+ +E + DI N
Sbjct: 648 ANEVLDYMKE-RGFTPSMA--TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+I AY + R+ +A + R G P+ T+ F Y + + A+ + I G
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
P+ T + + + + D A+ F+E L+
Sbjct: 765 ------CRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KA +L+ MKE S +NSLM +++++ K I++E+ A I PD +YN
Sbjct: 644 MVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ EM RD + D T++ Y +FE+A ++ +
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEM-RDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+ + Y ++ Y + E LR P+ L +++ +V
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIV 815
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 121/332 (36%), Gaps = 71/332 (21%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A L +M E + +L++ + + G E I +EM+ + P+ T+N
Sbjct: 364 MLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFN 423
Query: 61 VWMR-------------------------------ALAAVNDISGAER----VIEEMKRD 85
+++ L AV +G + V +EMKR
Sbjct: 424 AFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G V + TF+ L S Y G FE+A + + + DLS Y ++ + G +
Sbjct: 484 GFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 146 VYRI---------------WRSLRLAFPNTANISYLN--------------------MIQ 170
++ + SL A+ N I ++ ++
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
V LP AE+ F E + + DI N M+ Y + + A E+ + + RG P
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTP 662
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ T+ + R+ D + + L + + G
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKG 694
>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 811
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 12/291 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L E++ + + + +NSL+ Y G ++IP IIQ M+ + PD TY +
Sbjct: 306 EEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTIL 365
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ +V +++ G + + T+S L + + G+F + + L E+ N
Sbjct: 366 IAGHCESGDVEEGMKVRKDVLDQG-LQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIG 424
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANISYLNMIQVLVNLKDLP 179
D+ AY LI Y + G + + ++ ++ + P + N + +++ L L
Sbjct: 425 LDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLN--HFSILLGLCKKGLLV 482
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + D+ NV+I YAK G + NA L ++ G P T
Sbjct: 483 EARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLL 542
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
Y + GD++LA +G +P++ T T M + +V+
Sbjct: 543 YGYCKIGDLQLAESYFRAIQLSG------LLPTAVTYTTLMDALSEAGEVN 587
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 92/217 (42%), Gaps = 1/217 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E L E KE M FN LM+ G + + + M ++PD YT++
Sbjct: 236 EALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTL 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L V + A + E + ++G + + T+++L + Y GL ++ + ++ + +
Sbjct: 296 IHGLCKVGSMEEALDLFERVTKEG-MELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQG 354
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL Y LI + ++G++ E ++ + + ++Y ++ L +
Sbjct: 355 VEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEID 414
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E + D+ +++I Y K G +E A ++
Sbjct: 415 NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQV 451
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
NSL+ Y K G + + + ++ S ++P + TY M AL+ +++ + +EM
Sbjct: 539 NSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVA 598
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
R+ A+ T+S + + F++A LK+++++ + D Y LI + ++ N+
Sbjct: 599 K-RIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQ 657
Query: 145 EVYRI 149
+ I
Sbjct: 658 MAFHI 662
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + TF+ L + + G + A K++ +++
Sbjct: 221 GLCKESKMDDANELFDEMLVKGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 279
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEH 339
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I +EGR +AE++ G P+A+T+ + + + +
Sbjct: 340 RKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 399
Query: 245 NGDM 248
GD+
Sbjct: 400 KGDV 403
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 229 DDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 288
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM G + D T++ L + G + A K + N
Sbjct: 289 IYGLCKKGDLKQAHHLIDEMSVKG-LKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 347
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G RS+ AE
Sbjct: 348 IRLDEVAYTALISGLCQEG---------RSV--------------------------DAE 372
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E S D R ++I + K+G + +L + +R G P+ T+ +
Sbjct: 373 KMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + + G + +++ L + Y+ G ++ R
Sbjct: 143 YFFNILMHRFCKDGDIRLAQSVFDAITKWG-LRPSVVSYNTLMNGYIRLGDLDEGFRLKS 201
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ D+ Y LI + + + ++ + + +++ +I
Sbjct: 202 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 261
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ A + +K+ S + D+ N +I K+G L+ A L + +G P+ T+
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 321
Query: 237 IFSDYYLRNGDMKLAVD 253
D + GD+ A +
Sbjct: 322 TLIDGCCKEGDLDSAFE 338
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 13/158 (8%)
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+SY ++ + L DL + + D+ +V+I KE ++++A EL +
Sbjct: 178 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
+G PN T+ D + +NG + LA++ ++ + P T T +
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS------PDLITYNTLIYG 291
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
++ D+ A +D++ V+ +P TY
Sbjct: 292 LCKKGDLKQAHHL-------IDEMSVKGLKPDKITYTT 322
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 112/253 (44%), Gaps = 5/253 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+ A LL KM++ L + +N+++ K H + + +EM+ I P+ TY+
Sbjct: 32 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 91
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L S A R++ +M + ++ D TFS L +V+ G +AE+ E+ R
Sbjct: 92 LISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 150
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+ + Y LI + L E +++ + + FP+ ++Y +I+ K +
Sbjct: 151 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV--VTYNTLIKGFCKYKRVE 208
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
+ F+E + N++I + G + A+E+ + G PN T+
Sbjct: 209 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 268
Query: 240 DYYLRNGDMKLAV 252
D +NG ++ A+
Sbjct: 269 DGLCKNGKLEKAM 281
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/318 (18%), Positives = 129/318 (40%), Gaps = 7/318 (2%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
AL+++M + + ++ K G + ++ +M+ + P YN + L
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A + +EM+ G + + T+S+L S G + A R L ++ R + D
Sbjct: 62 CKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ + LI + + G L E +++ + + + ++Y ++I L A++ F+
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
S D+ N +I + K R+E E+ +RG N T+ I + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240
Query: 247 DMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDL 306
D +A + ++ + G P+ T T + + ++ A E L+++ +
Sbjct: 241 DCDMAQEIFKEMVSDG------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294
Query: 307 GVEVFEPLIRTYAAAGRT 324
+ + +I AG+
Sbjct: 295 TIYTYNIMIEGMCKAGKV 312
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L ++M + ++ S + ++SL+ + ++ + + M + PD TYN +
Sbjct: 139 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 198
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + V EM + G V + T++ L +AG + A+ KE+ +
Sbjct: 199 KGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ Y L+ + G L + ++ L+ + +Y MI+ + +
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F D+ N MI + ++G E A+ L + + G PN+ + L
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377
Query: 244 RNGD 247
R+GD
Sbjct: 378 RDGD 381
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 1/238 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ + E M + + +N+L+ + K E+ + +EM ++ ++ TYN+
Sbjct: 173 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 232
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L D A+ + +EM DG V + T++ L + G EKA + L+
Sbjct: 233 IQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I + G + + + ++ +L L ++Y MI A+
Sbjct: 292 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 351
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
FKE + + N +I A ++G E + EL + R G +A T + ++
Sbjct: 352 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + +L S + FN+LM Y K G ++ + M+AS + PD YTY+V +
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM +G V + TF+ L + + G + A K++ +++
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + I+Y +I DL E
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL---ETA 330
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F E+ +IR+ +V +I +EGR +AE++ G P T+ + +
Sbjct: 331 F-EYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389
Query: 241 YYLRNGDM 248
+ + GD+
Sbjct: 390 EFCKKGDV 397
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M + L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A+ +I+EM G + D T++ L + G E A K++ N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKG-LKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D AY LI+ Q G + ++ R +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 87/205 (42%), Gaps = 5/205 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M + +I A+ V + + + + +F+ L + Y++ G ++ R
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
++ D+ Y LI + + + ++ + PN +++ +I
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ A++L + +G P+ T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAI 259
+ D + GD++ A + +K I
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKKMI 338
>gi|125541147|gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group]
Length = 482
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 6/262 (2%)
Query: 4 KAEALLEKMKELNLGFSSM-PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
KA EKMK ++ ++ +N L+ +A+ G +++ + +++ S + PD YTYN
Sbjct: 165 KALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGV 224
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A I+ E V+ MK + + D TF+ L Y F+K E+ K L
Sbjct: 225 MDAYGKNGMITEMESVLVRMKSN-QCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSK 283
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-PNTANISYLNMIQVLVNLKDLPG 180
+ +IT YG+ + + + + F PN L M+ + +
Sbjct: 284 EKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYCDC--VSR 341
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F E S + N M+ AY G A++L + ++GA P+A T+++
Sbjct: 342 ARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTYKLLYK 401
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
Y + D KL L++ G
Sbjct: 402 AYTKANDKKLIQKLLKRMNSQG 423
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 93/239 (38%), Gaps = 11/239 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND----ISGAERVI 79
++ L+++ + G + +M+ S PD+ YN + A D ++ A
Sbjct: 111 YSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGAHLHSRDKSKALAKALGYF 170
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
E+MK R + T++ L + +AG ++ + K+L+ D+ Y ++ YG+
Sbjct: 171 EKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSPDIYTYNGVMDAYGK 230
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
G ++E+ + ++ I++ +I + E+ FK
Sbjct: 231 NGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVFKSLLRSKEKPTHPT 290
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
N MI Y K E AE + ++ G PN T E Y DC+ +A
Sbjct: 291 FNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMY-------AYCDCVSRA 342
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+KM++ + + +++L+ L K K +I +K S PD YN +
Sbjct: 38 LQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGK 97
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V + T++S L ++YVE F +A E+ DL+
Sbjct: 98 AKLFREARSLISEMKTAG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLT 156
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ G E +++ +R +SY +++V + + A F+
Sbjct: 157 TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLM 216
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N M+ Y K E A L + + RG +PN+ T+ + + G +
Sbjct: 217 QRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKL 276
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 277 DRAAMLFQKLRSSG 290
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + A +++M++D +V D +SNL +
Sbjct: 1 GLFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIEL 59
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 159
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 60 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 119
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
T SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 120 TT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
R+ G +PN ++ Y GD +L
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 205
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 208 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 267
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 268 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 326
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 327 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKXSNVV 381
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V +++ AY K + A ++
Sbjct: 382 EVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDV 418
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 302 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 356
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ ++I +++N L
Sbjct: 357 EVKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGY-FPDS------DVIAIVLNAYGKL 409
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
++ A + E E GC D
Sbjct: 410 QEFDKANDVYMEMQEVGCVFSD 431
>gi|255661206|gb|ACU25772.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 399
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L++M++ ++ + +++L+ L K K +I +K S I PD YN +
Sbjct: 5 LQEMEQDHVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIXPDLVAYNSMINVFGK 64
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V D ++S L ++YVE F +A E+ DL+
Sbjct: 65 AKLFKEARSLIXEMKTAG-VMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSFDLT 123
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ E +++ S+R ISY +++V + + A F+
Sbjct: 124 TCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAJHLFRLM 183
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ ++ N M+ Y K E A L + RG +PNA T+
Sbjct: 184 QRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITY 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
++EM++D V D +SNL + + + KA L+ DL AY +I ++G
Sbjct: 5 LQEMEQD-HVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIXPDLVAYNSMINVFG 63
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+ E + ++ A +SY ++ + V + A F E ++D+
Sbjct: 64 KAKLFKEARSLIXEMKTAGVMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSFDLT 123
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
N+MI Y + + A++L R+ G +PN ++ Y GD +L
Sbjct: 124 TCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLLRVY---GDAEL 172
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/264 (18%), Positives = 113/264 (42%), Gaps = 9/264 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ ++A +L+ +MK + ++ +++L+T+Y + + ++ EM+ D T N
Sbjct: 67 LFKEARSLIXEMKTAGVMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSFDLTTCN 126
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + ++ A+++ M++ G + + +++ L +Y +A LF +A + ++
Sbjct: 127 IMIDVYGQLDMAKEADKLFWSMRKIG-IEPNVISYNTLLRVYGDAELFGEAJHLFRLMQR 185
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
+N +++ Y ++ +YG+T + + + + R PN I+Y +
Sbjct: 186 KNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNA--ITYSTIXXXXXXXXXX 243
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
S D + MI AY + G + +A+ L +R P I
Sbjct: 244 XXXXXXXXXXRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL 303
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTG 262
+ R G ++ A +AID G
Sbjct: 304 A----RAGRIEEATWVFRQAIDAG 323
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +N++M +Y KT EK +IQEM I P++ TY+
Sbjct: 175 EAJHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIX 234
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
+ G V D + + Y AGL A+R L EL+ N
Sbjct: 235 XXXXXXXXXXXXXXXXXXXRSSG-VDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 293
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + + G + E ++R A + MI + K
Sbjct: 294 IPRDTA-----IHILARAGRIEEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVV 348
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V +++ AY K + A ++
Sbjct: 349 EVFDKMRGFGYFPDSNVIALVLNAYGKLHEFDRANDV 385
>gi|255661210|gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K + I PD YN
Sbjct: 24 LFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V D ++S L ++YVE F +A E+
Sbjct: 84 SMINVFGKAKLFREARSLISEMREAG-VVPDTVSYSTLLTMYVENQKFLEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ E +++ S+R +SY +++V + +
Sbjct: 143 IKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + RG +PNA T+
Sbjct: 203 AIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAMLFQKLRSSG 284
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A L+ DL AY +I ++G+ E + +R A +SY ++
Sbjct: 63 AISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLT 122
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ V + A F E D+ N+MI Y + + A++L R+ G +P
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEP 182
Query: 231 NAKTWEIFSDYYLRNGDMKL 250
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 116/289 (40%), Gaps = 11/289 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ +M+E+ N ++ +Y + ++ + M+ I P+ +YN +
Sbjct: 132 EALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLL 191
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R A + M+R + + T++ + IY + EKA ++E+ NR
Sbjct: 192 RVYGDAELFGEAIHLFRLMQRKD-IEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGI 250
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y +I+++G+ G L +++ LR + ++ Y MI + A++
Sbjct: 251 EPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKR 310
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E + +++ GA GR+E A + +A G + +E D +
Sbjct: 311 LLHELKRPDNIPRDTAIHILAGA----GRIEEATWVFRQAIDAGEVKDITVFERMIDLFS 366
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+ V+ EK RG G + P S I + + + + D A
Sbjct: 367 KYKKYPNVVEVFEKM----RGLG--YFPDSNVISLVLNAYGKLHEFDXA 409
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGY-FPDS------NVISLVLNAYGKL 403
Query: 176 KDLPGAEKCFKEWES-GCATYD 196
+ A + + + GC D
Sbjct: 404 HEFDXANDMYMDMQDEGCVFSD 425
>gi|255551975|ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543667|gb|EEF45195.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 875
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 117/244 (47%), Gaps = 2/244 (0%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
+ + FN ++ Y + EK + M++ ++PD +Y+ ++ LA+ + A+
Sbjct: 536 LTVLEFNVMIKAYGFGKNYEKACDLFDSMESHGVVPDKCSYSSLVQILASADLPDKAKHY 595
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+++M+ G V+ D + + S +V+ G E AE KE+ + D+ Y LI +
Sbjct: 596 LKKMQEAGLVS-DCVQYCAVISSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYGVLINAFA 654
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+G + E +++ A + Y ++I++ + L A++ +K +S +
Sbjct: 655 DSGCVKEAISYIDAMKGAGLPGNTVIYNSLIKLYTKVGYLREAQETYKLLQSSDVGPETY 714
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
+N MI Y+++ ++ AEE+ E +R+G D N T+ + Y R G + A+ ++
Sbjct: 715 SSNCMIDLYSEQSMVKPAEEIFESMKRKG-DANEFTYAMMLCMYKRLGWFEQAIQIAKQM 773
Query: 259 IDTG 262
+ G
Sbjct: 774 RELG 777
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 126/299 (42%), Gaps = 42/299 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ L++KM+EL + +N L+ ++AK + + MK + PD +Y
Sbjct: 382 EEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDLVSYRTL 441
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA----------- 111
+ A + + ++ AE ++ EM G + D T S L +Y+EAG+ EK+
Sbjct: 442 LYAFSIRHMVNDAENLVSEMDEKG-IEIDEYTQSALTRMYIEAGMLEKSWLWFWRFHLAG 500
Query: 112 --------------------ERALKELENRNAHRDLSAYQF--LITLYGQTGNLSEVYRI 149
+ A + R L+ +F +I YG N + +
Sbjct: 501 NMSSECYSANIDAYGERGHVKEAARVFACRLEQNKLTVLEFNVMIKAYGFGKNYEKACDL 560
Query: 150 WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF--KEWESGCATYDIRVTNVMIGAY 207
+ S+ SY +++Q+L + DLP K + K E+G + ++ V I ++
Sbjct: 561 FDSMESHGVVPDKCSYSSLVQILAS-ADLPDKAKHYLKKMQEAGLVSDCVQYCAV-ISSF 618
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
K G+LE AEE+ + P+ + + + + +G +K A+ ID +G G
Sbjct: 619 VKLGKLEMAEEVYKEMVGFDVKPDIIVYGVLINAFADSGCVKEAIS----YIDAMKGAG 673
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 4/267 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA+ L+KM+E L + + ++++ + K G E + +EM + PD Y
Sbjct: 588 LPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYG 647
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V + A A + A I+ MK G + + +++L +Y + G +A+ K L++
Sbjct: 648 VLINAFADSGCVKEAISYIDAMKGAG-LPGNTVIYNSLIKLYTKVGYLREAQETYKLLQS 706
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + + +I LY + + I+ S++ + +Y M+ + L
Sbjct: 707 SDVGPETYSSNCMIDLYSEQSMVKPAEEIFESMKRK-GDANEFTYAMMLCMYKRLGWFEQ 765
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + K+ E G TY + NV+ G YA +GR + A + G P+ T++
Sbjct: 766 AIQIAKQMRELGLLTYLLSYNNVL-GLYALDGRFKEAVGTFKEMVGAGIQPDDCTFKSLG 824
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDG 266
++ G K AV LE R G
Sbjct: 825 IVLVKCGISKQAVGKLEATTKKDRHSG 851
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 107/274 (39%), Gaps = 34/274 (12%)
Query: 14 ELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDIS 73
ELN+ + +N ++ + K + + EM I P + TY + +
Sbjct: 201 ELNV----IHYNIMIRILGKAKQWRYLECLCNEMSFKRISPINSTYGTLIDVYSKGGLRE 256
Query: 74 GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR-------- 125
A +E+M + G + D T + +Y +AG F+KAE K+ R A R
Sbjct: 257 KALDWLEKMNKQG-MEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSLREALRHKVTGKAS 315
Query: 126 ---------DLS----AYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQ 170
D+S Y +I YG+ G + E I+ + + P T +++ MI
Sbjct: 316 VRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTT--VTFNTMIH 373
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ N L ++ E D R N++I +AK + A +R ++ P
Sbjct: 374 ICGNQGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKDQLQP 433
Query: 231 NAKTWEI----FSDYYLRNGDMKLAVDCLEKAID 260
+ ++ FS ++ N L + EK I+
Sbjct: 434 DLVSYRTLLYAFSIRHMVNDAENLVSEMDEKGIE 467
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 105/274 (38%), Gaps = 46/274 (16%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP----------------------- 37
+T KA +E +++++ SS +N+++ Y K G
Sbjct: 310 VTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTFN 369
Query: 38 ------------EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
E++ ++Q+M+ PD+ TYN+ + A NDI+ A + MK+D
Sbjct: 370 TMIHICGNQGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKKD 429
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
++ D ++ L + + AE + E++ + D L +Y + G L +
Sbjct: 430 -QLQPDLVSYRTLLYAFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAGMLEK 488
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT----N 201
+ + LA N ++ Y I + A + F C ++T N
Sbjct: 489 SWLWFWRFHLA-GNMSSECYSANIDAYGERGHVKEAARVF-----ACRLEQNKLTVLEFN 542
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
VMI AY E A +L + G P+ ++
Sbjct: 543 VMIKAYGFGKNYEKACDLFDSMESHGVVPDKCSY 576
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 4/238 (1%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
KMKE+ + + +N+++ +Y K G P KI A++Q+MK + PD TYN + A
Sbjct: 204 KMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAG 263
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
+ A + EE+K G D T++ L +Y ++ ++A LK++E+ + +
Sbjct: 264 SLYEEALDLFEEIKVAG-FRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVT 322
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW- 188
Y L++ Y + G L + + R + +Y ++ VN A + F+E
Sbjct: 323 YNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMR 382
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ GC +I N +I Y G+ E ++ + + P+ TW + +NG
Sbjct: 383 KVGCKP-NICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNG 439
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 1/233 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++M+ + S + +NSL++ Y + G E + ++M I PD YTY
Sbjct: 302 KEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTL 361
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A V EEM++ G + TF+ L +Y + G FE+ + KE++
Sbjct: 362 LSGFVNAGKEELAMEVFEEMRKVG-CKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCK 420
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ + L+ ++GQ G SEV ++ ++ + ++ +I A
Sbjct: 421 CSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAM 480
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+K + D+ N ++ A+ G E +E++ + G PN T+
Sbjct: 481 AAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTY 533
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 9/246 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E++E +L +MK+ + + ++SL+ YA E++ A+ +E+ + +I T+ V
Sbjct: 512 EQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIK----THAVL 567
Query: 63 MRALAAVND----ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
++ L VN + ER E ++ G ++ D TT + + SIY + KA L +
Sbjct: 568 LKTLVLVNSKVDLLVETERAFLEFRKRG-ISPDVTTSNAMLSIYGRKKMVPKANEILNFM 626
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
L++Y L+ +Y +T N + +I+R + ISY +I +
Sbjct: 627 YESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMM 686
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A++ +E + D+ N I AYA + A ++ ++G PN T+
Sbjct: 687 DEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSI 746
Query: 239 SDYYLR 244
D+Y +
Sbjct: 747 VDWYCK 752
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 137/324 (42%), Gaps = 18/324 (5%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A L E++K ++ +N+L+ +Y K+ P++ ++++M+++S P TYN
Sbjct: 265 LYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYN 324
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A V++ D + D T++ L S +V AG E A +E+
Sbjct: 325 SLVSAYVRGGLLEDA-LVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRK 383
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + LI +YG G E+ ++++ +++ + +++ ++ V
Sbjct: 384 VGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSE 443
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F+E + + N +I AY + G + A +R G P+ T+
Sbjct: 444 VSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLA 503
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
R G + + EK + + G K P+ T + + + ++V+ E
Sbjct: 504 TLARGGLWEQS----EKVLAEMKDGGCK--PNEVTYSSLLHAYANGREVERMNALAE--- 554
Query: 301 KAVDDLGVEVFEPLIRTYAAAGRT 324
E++ I+T+A +T
Sbjct: 555 --------EIYSGTIKTHAVLLKT 570
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 123/303 (40%), Gaps = 8/303 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + E+M+++ + FN+L+ +Y G E++ + +E+K PD T+N
Sbjct: 372 ELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTL 431
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ S V EEMKR R A + TF+ L S Y G F++A A K +
Sbjct: 432 LAVFGQNGMDSEVSGVFEEMKR-SRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAG 490
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DLS Y ++ + G + ++ ++ ++Y +++ N +++
Sbjct: 491 VSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMN 550
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+E SG + ++ +K L E R+RG P+ T Y
Sbjct: 551 ALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIY 610
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKK 301
R + A + L ++G S + + M + + ++ +E F EIL K
Sbjct: 611 GRKKMVPKANEILNFMYESG------LTLSLTSYNSLMYMYSRTENFHKSEQIFREILDK 664
Query: 302 AVD 304
++
Sbjct: 665 GIE 667
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 115/297 (38%), Gaps = 36/297 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + E+MK FN+L++ Y + G ++ A + M + + PD TYN
Sbjct: 440 MDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYN 499
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYV----------------- 103
+ LA +E+V+ EMK DG + T+S+L Y
Sbjct: 500 AVLATLARGGLWEQSEKVLAEMK-DGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYS 558
Query: 104 ------------------EAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
+ L + ERA E R D++ ++++YG+ + +
Sbjct: 559 GTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPK 618
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
I + + + SY +++ + ++ +E+ F+E D+ N++I
Sbjct: 619 ANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIY 678
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
AY + ++ A+ + E + P+ T+ F Y + A+D + I G
Sbjct: 679 AYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQG 735
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KA +L M E L S +NSLM +Y++T + K I +E+ I PD +YN
Sbjct: 615 MVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYN 674
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A + + A+R+IEEMK V D T++ + Y +F +A ++ +
Sbjct: 675 IVIYAYCRNDMMDEAKRIIEEMKVPAPV-PDVVTYNTFIAAYAADSMFVEAIDVIRYMIK 733
Query: 121 RNAHRDLSAYQFLITLY 137
+ + + Y ++ Y
Sbjct: 734 QGCKPNHNTYNSIVDWY 750
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 131/344 (38%), Gaps = 31/344 (9%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
++++ KTG + +++ ++A D Y Y + A A A +V +MK G
Sbjct: 150 IVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVG 209
Query: 87 RVAADWTTFSNLASIYVEAGL-FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
T++ + ++Y + G+ + K +++++ DL Y LI+ E
Sbjct: 210 -CEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEE 268
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
++ +++A ++Y ++ V + A + K+ ES + N ++
Sbjct: 269 ALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVS 328
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG--- 262
AY + G LE+A LK + +G P+ T+ ++ G +LA++ E+ G
Sbjct: 329 AYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKP 388
Query: 263 -----------RGDGGKW---------------VPSSETIRTFMRHFEQEKDVDGAEGFL 296
GD GK+ P T T + F Q G
Sbjct: 389 NICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVF 448
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 340
E +K++ + F LI Y G M +M + VS
Sbjct: 449 EEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVS 492
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 105/260 (40%), Gaps = 3/260 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K AL++ MK L +N+L++ E+ + +E+K + PD+ TYN +
Sbjct: 233 KIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALL 292
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V+++M+ + T+++L S YV GL E A +++ ++
Sbjct: 293 DVYGKSRRPKEAMEVLKQMESNS-FRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGI 351
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAE 182
D+ Y L++ + G ++ +R NI N +I++ +
Sbjct: 352 KPDVYTYTTLLSGFVNAGKEELAMEVFEEMR-KVGCKPNICTFNALIKMYGDRGKFEEMV 410
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K FKE + + DI N ++ + + G + E +R P T+ Y
Sbjct: 411 KVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAY 470
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
R G A+ ++ ++ G
Sbjct: 471 GRCGSFDQAMAAYKRMLEAG 490
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 110/244 (45%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 220
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + F+ L + + G + A K++ +++
Sbjct: 221 GLCKESKMDDANELFDEMLVKGLVP-NGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 279
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L +V+ + + + I+Y +I DL A +
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 339
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K+ D +I +EGR +AE++ G P+A+T+ + + + +
Sbjct: 340 RKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCK 399
Query: 245 NGDM 248
GD+
Sbjct: 400 KGDV 403
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L + + F +L+ + K G + I ++M + S++PD TYN
Sbjct: 229 DDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTL 288
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ +I+EM G + D T++ L + G + A K++ N
Sbjct: 289 IYGLCKKGDLKQVHHLIDEMSMKG-LKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQEN 347
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G + ++ R + LN V LK
Sbjct: 348 IRLDEVAYTALISGLCQEGRSVDAEKMLREM------------LN-----VGLKP----- 385
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
D R ++I + K+G + +L + +R G P+ T+ +
Sbjct: 386 -------------DARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 135/318 (42%), Gaps = 6/318 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L +M++ ++ +N L YA+ G E+ + M + ++P+++TYN M A
Sbjct: 302 VLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYG 361
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
V + A + ++MK+ G V + T++ + + + F L E+ +
Sbjct: 362 NVGKVDEALALFDQMKKTGFV-PNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNR 420
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ ++ + G+ G V R+ +R + +Y +I A K + E
Sbjct: 421 VTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNE 480
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
S T I N ++ +++G A+ + + R +G PN +++ + Y + G+
Sbjct: 481 MTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGN 540
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLG 307
+ + +E + G G + PS +RT + + + +DG E + +K +
Sbjct: 541 VA-GIAAIENEV---YGSGAVF-PSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPD 595
Query: 308 VEVFEPLIRTYAAAGRTS 325
+ +F ++ YA G S
Sbjct: 596 LVIFNSMLSIYAKNGMYS 613
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 132/325 (40%), Gaps = 15/325 (4%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
ALL++M+ + ++++ + G ++ A +++KA P TYN ++
Sbjct: 231 ALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVF 290
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ + A RV+ EM+++G D T++ LA Y AG FE+A R L + ++ +
Sbjct: 291 GKAGNYTEALRVLGEMEQNG-CQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPN 349
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGA--EK 183
Y ++T YG G + E ++ + + F N++ N++ ++ K E
Sbjct: 350 AFTYNTVMTAYGNVGKVDEALALFDQMKKTGF--VPNVNTYNLVLGMLGKKSRFTVMLEM 407
Query: 184 CFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ SGC RVT N M+ K G + + E R G + + T+ Y
Sbjct: 408 LGEMSRSGCTPN--RVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAY 465
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R G A + G + P T + ++ D A+ + ++
Sbjct: 466 GRCGSRTNAFKMYNEMTSAG------FTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTK 519
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPV 327
+ + L++ YA G + +
Sbjct: 520 GFKPNEQSYSLLLQCYAKGGNVAGI 544
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 103/236 (43%), Gaps = 6/236 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
E+A L +++ + + + +N ++ +Y + G +I A++ EM+A+ + PD +T +
Sbjct: 191 ERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTAST 250
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + A E++K G A T++ L ++ +AG + +A R L E+E
Sbjct: 251 VIAACCRDGLVDEAVAFFEDLKARGH-APCVVTYNALLQVFGKAGNYTEALRVLGEMEQN 309
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
D Y L Y + G E R ++ + PN +Y ++ N+ +
Sbjct: 310 GCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNA--FTYNTVMTAYGNVGKVD 367
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
A F + + ++ N+++G K+ R E+ R G PN TW
Sbjct: 368 EALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 423
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 98/220 (44%), Gaps = 1/220 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ + ++ G +I+ +M+ P+ +Y++ ++ A +++G + E+
Sbjct: 493 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVY 552
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V W L + + E A +E++ R + DL + ++++Y + G
Sbjct: 553 GSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMY 612
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTNV 202
S+ ++ S++ + + I+Y +++ + + AEK + + S D+ N
Sbjct: 613 SKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNT 672
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+I + K+G ++ A+ + G P A T+ Y
Sbjct: 673 VINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGY 712
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 45/249 (18%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + +LE M+ + S +N+L+ Y + G + EM ++ P TYN
Sbjct: 435 MEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYN 494
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L+ D S A+ ++ +M+ G F+ E+
Sbjct: 495 ALLNVLSRQGDWSTAQSIVSKMRTKG---------------------FKPNEQ------- 526
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---LAFPNTANISYLNMIQVLVNLK- 176
+Y L+ Y + GN++ + I + FP+ + L V+ N K
Sbjct: 527 --------SYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTL----VIANFKC 574
Query: 177 -DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
L G E F+E ++ D+ + N M+ YAK G A E+ + +R G P+ T+
Sbjct: 575 RRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITY 634
Query: 236 EIFSDYYLR 244
D Y +
Sbjct: 635 NSLMDMYAK 643
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FNS++++YAK G K + +K S + PD TYN M A ++ AE+++ ++K
Sbjct: 599 FNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLK 658
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ D +++ + + + + GL ++A+R L E+ Y L+ Y
Sbjct: 659 CSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMF 718
Query: 144 SE 145
SE
Sbjct: 719 SE 720
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM-PDSYTY 59
M KA + + +K L + +NSLM +YAK + I+ ++K S M PD +Y
Sbjct: 611 MYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSY 670
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERAL 115
N + + A+RV+ EM DG +A T+ L Y +F +A +
Sbjct: 671 NTVINGFCKQGLVKEAQRVLSEMVADG-MAPCAVTYHTLVGGYSSLEMFSEAREVI 725
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 95/265 (35%), Gaps = 30/265 (11%)
Query: 71 DISGAERVIEEMKRDGRVAA----------------DWTTFSNLASIYVEAGLFEKAERA 114
D S E V+ + R+G+ A D ++ + AG +E+A
Sbjct: 137 DASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALEL 196
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTG-NLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
EL + L Y ++ +YG+ G + + + +R A + +I
Sbjct: 197 FAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACC 256
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+ A F++ ++ + N ++ + K G A + + G P+A
Sbjct: 257 RDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAV 316
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAE 293
T+ + Y R G + A CL+ G +P++ T T M + VD A
Sbjct: 317 TYNELAGTYARAGFFEEAARCLDTMASKG------LLPNAFTYNTVMTAYGNVGKVDEAL 370
Query: 294 GFLEILKKAVDDLGVEVFEPLIRTY 318
+ +KK F P + TY
Sbjct: 371 ALFDQMKKT-------GFVPNVNTY 388
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 196 DIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCL 255
D+R ++ A ++ GR E A EL RR+G P T+ + D Y R G + L
Sbjct: 173 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVAL 232
Query: 256 EKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLI 315
+D R G + P T T + ++ VD A F E LK V + L+
Sbjct: 233 ---LDEMRAAGVE--PDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALL 287
Query: 316 RTYAAAG 322
+ + AG
Sbjct: 288 QVFGKAG 294
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 106/235 (45%), Gaps = 1/235 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A + E+MK + FN+L+ +Y K+ P++ +++EM+ S P TYN
Sbjct: 303 LYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYN 362
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + A + ++M G + D T++ L S + +AG+ E A R E+
Sbjct: 363 SLISAYARDGLLREAMELKDQMVEKG-IKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRA 421
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + LI ++G G +E+ +++ + + +++ ++ V
Sbjct: 422 AGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSE 481
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
FKE + + N +I AY++ G + A + +R G P+ ++
Sbjct: 482 VSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSY 536
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K L+ MK + +N+L++ + E+ + +EMK S PD T+N +
Sbjct: 271 KISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLL 330
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V++EM+ G + T+++L S Y GL +A ++ +
Sbjct: 331 DVYGKSRRPKEAMEVLKEMEFSG-FSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGI 389
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y L++ + + G RI+ +R A ++ +I++ N K
Sbjct: 390 KPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMK 449
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+E E DI N ++ + + G + + +R G P T+ Y
Sbjct: 450 VFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYS 509
Query: 244 RNGDMKLAVDCLEKAIDTG 262
R G + A+ ++ ++ G
Sbjct: 510 RCGSFQQAMAVYKRMLEAG 528
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 125/297 (42%), Gaps = 37/297 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + ++MK FN+L++ Y++ G ++ A+ + M + + PD +YN
Sbjct: 478 MDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYN 537
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY---------------VEA 105
+ ALA +E+V EMK DGR + T+ +L Y + +
Sbjct: 538 AVLAALARGGLWEQSEKVFAEMK-DGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYS 596
Query: 106 GLFE--------------------KAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
GL E + E A +EL+ + + DLS +I +YG+ +++
Sbjct: 597 GLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGS-PDLSTLNAMIAIYGRRQMVAK 655
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
I + + + + +Y +++ + ++ +E+ KE + D+ N +I
Sbjct: 656 ANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIF 715
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
AY + GR+++A + + G P+ T+ F Y + + A+ + I G
Sbjct: 716 AYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHG 772
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 100/278 (35%), Gaps = 37/278 (13%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYA-------------------------------- 32
A ++L +++ + SL+T YA
Sbjct: 201 ASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILN 260
Query: 33 ---KTGHP-EKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRV 88
K G P KI ++ MK+S + PD YTYN + + A +V EEMK G
Sbjct: 261 VYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSG-F 319
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
+ D TF+ L +Y ++ ++A LKE+E + Y LI+ Y + G L E
Sbjct: 320 SPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAME 379
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ + +Y ++ A + F E + +I N +I +
Sbjct: 380 LKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHG 439
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
GR ++ E P+ TW + +NG
Sbjct: 440 NRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNG 477
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 132/324 (40%), Gaps = 10/324 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E A + +M+ + FN+L+ ++ G ++ + +E++ + PD T+N
Sbjct: 408 MDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWN 467
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ S V +EMKR G V + TF+ L S Y G F++A K +
Sbjct: 468 TLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERDTFNTLISAYSRCGSFQQAMAVYKRMLE 526
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DLS+Y ++ + G + +++ ++ ++Y +++ N K++
Sbjct: 527 AGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIER 586
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+E SG + ++ +K L E E +++G+ P+ T
Sbjct: 587 MHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGS-PDLSTLNAMIA 645
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EIL 299
Y R + A + L ++G + PS T + M + ++ + +E L EIL
Sbjct: 646 IYGRRQMVAKANEILNFMNESG------FSPSLATYNSLMYMHSRSENFERSEEVLKEIL 699
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGR 323
K + + + +I Y GR
Sbjct: 700 AKGLKPDLIS-YNTVIFAYCRNGR 722
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 1/161 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M KA +L M E S +NSLM +++++ + E+ +++E+ A + PD +YN
Sbjct: 652 MVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYN 711
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A + A R+ MK G V D T++ + Y LFE A ++ +
Sbjct: 712 TVIFAYCRNGRMKDASRIFSYMKTYGLV-PDVITYNTFVASYAADSLFEDAIGVVRYMIK 770
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTA 161
R+ + Y ++ Y + ++ SL P+
Sbjct: 771 HGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQLDPHVT 811
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 95/222 (42%), Gaps = 3/222 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +A L ++M E + + +L++ + K G E I EM+A+ P+ T+N
Sbjct: 373 LLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFN 432
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++ + +V EE++ A D T++ L +++ + G+ + KE++
Sbjct: 433 ALIKMHGNRGRFAEMMKVFEEIE-ICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 491
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ + LI+ Y + G+ + +++ + A SY ++ L
Sbjct: 492 AGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQ 551
Query: 181 AEKCFKEWESG-CATYDIRVTNVMIGAYAKEGRLENAEELKE 221
+EK F E + G C ++ + ++ AYA +E L E
Sbjct: 552 SEKVFAEMKDGRCKPNELTYCS-LLHAYANSKEIERMHTLAE 592
>gi|218184750|gb|EEC67177.1| hypothetical protein OsI_34045 [Oryza sativa Indica Group]
Length = 755
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 12/291 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L E++ + + + +NSL+ Y G ++IP IIQ M+ + PD TY +
Sbjct: 250 EEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTIL 309
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ +V +++ G + + T+S L + + G+F + + L E+ N
Sbjct: 310 IAGHCESGDVEEGMKVRKDVLDQG-LQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIG 368
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANISYLNMIQVLVNLKDLP 179
D+ AY LI Y + G + + ++ ++ + P + N + +++ L L
Sbjct: 369 LDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLN--HFSILLGLCKKGLLV 426
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + D+ NV+I YAK G + NA L ++ G P T
Sbjct: 427 EARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLL 486
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
Y + GD++LA + +AI +P++ T T M + +V+
Sbjct: 487 YGYCKIGDLQLA-ESYFRAIQL-----SGLLPTAVTYTTLMDALSEAGEVN 531
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
NSL+ Y K G + + + ++ S ++P + TY M AL+ +++ + +EM
Sbjct: 483 NSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVA 542
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
R+ A+ T+S + + F++A LK+++++ + D Y LI + ++ N+
Sbjct: 543 K-RIKANAVTYSVVVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQ 601
Query: 145 EVYRI 149
+ I
Sbjct: 602 MAFHI 606
>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
Length = 829
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 12/291 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L E++ + + + +NSL+ Y G ++IP IIQ M+ + PD TY +
Sbjct: 324 EEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTIL 383
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ +V +++ G + + T+S L + + G+F + + L E+ N
Sbjct: 384 IAGHCESGDVEEGMKVRKDVLDQG-LQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIG 442
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANISYLNMIQVLVNLKDLP 179
D+ AY LI Y + G + + ++ ++ + P + N + +++ L L
Sbjct: 443 LDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLN--HFSILLGLCKKGLLV 500
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + D+ NV+I YAK G + NA L ++ G P T
Sbjct: 501 EARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLL 560
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
Y + GD++LA +G +P++ T T M + +V+
Sbjct: 561 YGYCKIGDLQLAESYFRAIQLSG------LLPTAVTYTTLMDALSEAGEVN 605
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 92/217 (42%), Gaps = 1/217 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E L E KE M FN LM+ G + + + M ++PD YT++
Sbjct: 254 EALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTL 313
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L V + A + E + ++G + + T+++L + Y GL ++ + ++ + +
Sbjct: 314 IHGLCKVGSMEEALDLFERVTKEG-MELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQG 372
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL Y LI + ++G++ E ++ + + ++Y ++ L +
Sbjct: 373 VEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEID 432
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E + D+ +++I Y K G +E A ++
Sbjct: 433 NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQV 469
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
NSL+ Y K G + + + ++ S ++P + TY M AL+ +++ + +EM
Sbjct: 557 NSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVA 616
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
R+ A+ T+S + + F++A LK+++++ + D Y LI + ++ N+
Sbjct: 617 K-RIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQ 675
Query: 145 EVYRI 149
+ I
Sbjct: 676 MAFHI 680
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 102/229 (44%), Gaps = 1/229 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E + L +M+E+ L + +NSL+ Y K G E++ ++ EMK +PD TYN
Sbjct: 247 ENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGL 306
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A EMK +G + + T+S L + + G+ + A + L ++
Sbjct: 307 INCYCKFEKMPRAFEYFSEMKNNG-LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y LI + GNL+E +++ + A ++Y ++ L + AE
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
+ F+ + + +V ++ Y K R+E+A ++ ++ P+
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 474
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 15/272 (5%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
F+ L +++ + G E+ M+ +P + + N + L+ + + +M
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G +A T++ + + G E + R ++ D+ Y LI YG+ G+L
Sbjct: 223 GAG-IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
EV ++ ++ I+Y +I + +P A + F E ++ ++ + +
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLE--- 256
I A+ KEG ++ A +L RR G PN T+ D + G++ KL D L+
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401
Query: 257 -------KAIDTGRGDGGKWVPSSETIRTFMR 281
A+ G G+ + + E R+ ++
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 433
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 6/209 (2%)
Query: 94 TFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
F L S++VE GL E+A + N + FL+ ++GN V + + +
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221
Query: 154 RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRL 213
A + +Y MI L DL + + F + + D+ N +I Y K G L
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281
Query: 214 ENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSS 273
E L + G P+ T+ + Y + M A + + + G P+
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK------PNV 335
Query: 274 ETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
T T + F +E + GA L +++
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRT 364
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE + M + + + + +L+ Y K E I+++M +I PD Y +
Sbjct: 423 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII 482
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + + ++EEMK G ++A+ + + Y +AG A +E+++
Sbjct: 483 WGHCSQRKLEETKLILEEMKSRG-ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 541
Query: 124 HRDLSAYQFLITLYGQTGNLS-EVYRIWRSLRLAF-PNTANISYLNMIQVLVNLKDLPGA 181
+ Y LI + G + V R L L PN A Y ++I L + A
Sbjct: 542 EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVA--VYTSLIDGLCXNNCIESA 599
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+K F E + T DI +I K G L+ A L R + + +
Sbjct: 600 KKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSG 659
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
+ + G++ A + I+ G
Sbjct: 660 FSQCGELHQARKFFNEMIEKG 680
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 5/225 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ + +LE+MK + + + +++ Y K G QEM+ + TY V
Sbjct: 492 EETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVL 551
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A M G + + +++L E A++ E++ R
Sbjct: 552 IDGLCEAGIVELAVDYFCRMLSLG-LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRG 610
Query: 123 AHRDLSAYQFLITLYGQTGNLSE-VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D++A+ LI + GNL E + I R LA ++ Y +++ +L A
Sbjct: 611 MTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHV-YTSLVSGFSQCGELHQA 669
Query: 182 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR 225
K F E E G ++ + ++ Y K G+L+ A ELK R
Sbjct: 670 RKFFNEMIEKGILPEEV-LCICLLREYYKRGQLDEAIELKNEMER 713
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 11/325 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L KM L +++ +N+L+ G E I + M + +P + TYN
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEI 418
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + DI A + ++M + G + + T++ L Y + G A R L+ ++
Sbjct: 419 IKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + + G L ++ + + +++Y +I NL + A
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 183 KCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F K ESG + NVMI ++K + AE + ++G PN T+ F D
Sbjct: 538 ALFWKMVESGNLPSS-QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF--LEIL 299
RNG LA + + + P+ T + + QE + AE + L L
Sbjct: 597 LCRNGRTGLAFKIFHEM------EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRT 324
+ V+ + L++ GR
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRC 675
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 5/260 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A+ ++M + +S+ +++L+ G E+ +++EM I P YTY + +
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+L S A ++ +MK+ G V + TF+ L S G FE A ++
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVP-NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
Y LI G + I W + P+T +Y +I+ + D+ A
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ--TYNEIIKCFCLMGDIQKAM 432
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F + ++ ++ N +I Y K+G L NA L E + G P+A T+ +
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
R G ++ A ++ G
Sbjct: 493 SRGGKLEHATSLFYGMMEHG 512
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 117/293 (39%), Gaps = 13/293 (4%)
Query: 12 MKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
+K LN G S + FN+++ + K G ++ I+ + P+++TY +
Sbjct: 191 IKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRN 250
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
+++ A + + M +DG + T+S L + G E+A L+E+ + +
Sbjct: 251 HNLDLAFAMFDRMVKDG-CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYT 309
Query: 130 YQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y + G SE + + R PN ++ +I L A + +
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ--TFTALISGLSRDGKFEIAIGLYHK 367
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ N +I EGR E A + + G+ P+ +T+ + GD
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
++ A+ +K + G P+ T T + + ++ +++ A LEI+K
Sbjct: 428 IQKAMVIFDKMLKAGSS------PNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 17/268 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ A LL +M++ G + P +N + K+G + +++ MK + PD T+N
Sbjct: 35 QAAMDLLREMEQ-QPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFN 93
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A++V++EM+R G AA+ T++ L + AG ++ A+ ++
Sbjct: 94 TLIAGLCKAGRLDEAQQVLDEMERSG-FAANLVTYNTLINGLSSAG---RSGEAVLVMQG 149
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL---AFPNTANISYLNMIQVLVNLKD 177
D Y +I + ++G + Y ++ P+T +Y +I L +
Sbjct: 150 MTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT--FTYSILINGLCKSSN 207
Query: 178 LPGAEKCFKEW---ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
L A++ +E + CA+ + N ++ Y K L+ A EL G P+ T
Sbjct: 208 LRKADELLQEMIGRKDCCAS--VVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVT 265
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ D R GD+ LEK + G
Sbjct: 266 YSTIIDGLCRCGDVDKGFALLEKMVSRG 293
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 4/262 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ +L++M+ + + +N+L+ + G + ++Q M + PD+ TYN
Sbjct: 106 DEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAI 162
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
+ +I A +EEMK+ + D T+S L + ++ KA+ L+E+ R
Sbjct: 163 IHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRK 222
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + A+ L+ Y + +L + S+ ++Y +I L D+
Sbjct: 223 DCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKG 282
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ S D+ V++ K G++ A L +R G PNA T+ + D
Sbjct: 283 FALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDG 342
Query: 242 YLRNGDMKLAVDCLEKAIDTGR 263
+ + +A D L D GR
Sbjct: 343 LCKIDKLDMANDLLTSIRDKGR 364
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 109/248 (43%), Gaps = 19/248 (7%)
Query: 55 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
D+YTY V +RA ++ A ++ EM++ +A + ++ ++G +A
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLV 173
+K +++ D+ + LI + G L E ++ + R F AN+ N L+
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGF--AANLVTYN---TLI 131
Query: 174 N-LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA----EELKERARRRGA 228
N L + + + T D + N +I + K G ++ A EE+K+RA G
Sbjct: 132 NGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRA---GC 188
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
P+ T+ I + ++ +++ A + L++ I GR D S T + + + +D
Sbjct: 189 SPDTFTYSILINGLCKSSNLRKADELLQEMI--GRKD---CCASVVAFNTLVDGYCKAQD 243
Query: 289 VDGAEGFL 296
+D A L
Sbjct: 244 LDRARELL 251
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 9/137 (6%)
Query: 165 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
Y + L +P A + K + G D+ N +I K GRL+ A+++ +
Sbjct: 57 YNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME 116
Query: 225 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 284
R G N T+ + G AV ++ G P ++T + F
Sbjct: 117 RSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ---------GMTTTPDTQTYNAIIHGFC 167
Query: 285 QEKDVDGAEGFLEILKK 301
+ ++D A GFLE +K+
Sbjct: 168 KSGEIDRAYGFLEEMKQ 184
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEALL +M+ L L + +N+L+ T H ++ +M + + TY +
Sbjct: 102 TLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYML 161
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A + + V+ EMKR G + D +S L +Y + G+++KA + E++
Sbjct: 162 LLNAYARAGRLEDSWWVLGEMKRRG-IRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQEL 220
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y LI +G+ G L++ +++ + ++ ++I+ + + A
Sbjct: 221 GVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRA 280
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F + D ++ +I ++G+ + ++L R RG + + + D
Sbjct: 281 LRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDI 340
Query: 242 YLRNGDMKLAVDCL 255
Y + G + A DC+
Sbjct: 341 YGQYGHFRDAHDCV 354
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 36/245 (14%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL M+ L S + L+ A+ G + A++ EM+ + PD+ YN + L
Sbjct: 73 LLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLL 132
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ + A+R++ +M DG VA + T+ L + Y AG E + L E++ R D
Sbjct: 133 STAHLRLADRLLLQMADDG-VARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDT 191
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ Y L+ LY G +W+ A + M ++ V L
Sbjct: 192 AGYSTLVRLYRDNG-------MWKK--------ATDLIMEMQELGVEL------------ 224
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
D+++ N +I + K G+L +A ++ ++ G P+ TW ++ R G+
Sbjct: 225 --------DVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGN 276
Query: 248 MKLAV 252
K A+
Sbjct: 277 TKRAL 281
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 113/280 (40%), Gaps = 7/280 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L +MK + + +++L+ LY G +K +I EM+ + D YN +
Sbjct: 178 VLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFG 237
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ A +V ++M +G V D TT+++L + G ++A R ++ + D
Sbjct: 238 KYGQLADARKVFDKMCAEG-VKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDP 296
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ +I+ G+ G E+ +++ +R + Y ++ + A C
Sbjct: 297 KIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAA 356
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
++ + V+ AYA++G E + + G +PN + + + G
Sbjct: 357 LKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGR 416
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEK 287
A+ L+ D+G P T T M+ F + K
Sbjct: 417 HLEALAVLQHIKDSGMS------PDVVTYTTLMKAFMRAK 450
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 104/253 (41%), Gaps = 19/253 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA L+ +M+EL + +N L+ + K G + +M A + PD T+N
Sbjct: 206 MWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWN 265
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+R V + A R M+ +G + D F + S E G +++ ++ + N
Sbjct: 266 SLIRWHCRVGNTKRALRFFAAMQEEG-MYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRN 324
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--------AFPNTAN-ISYLNMIQV 171
R + Y L+ +YGQ G+ + + +L+ F AN + + +
Sbjct: 325 RGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQ 384
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
VN+ L AE ++ + N++I A+ GR A + + + G P+
Sbjct: 385 TVNVLQLMEAEGI---------EPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPD 435
Query: 232 AKTWEIFSDYYLR 244
T+ ++R
Sbjct: 436 VVTYTTLMKAFMR 448
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/195 (17%), Positives = 75/195 (38%), Gaps = 1/195 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T++A M+E + F ++++ + G ++I + M+ + Y V
Sbjct: 277 TKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAV 336
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + +K + + + F LA+ Y + GL E+ L+ +E
Sbjct: 337 LVDIYGQYGHFRDAHDCVAALKAEN-LQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAE 395
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+L LI +G G E + + ++ + + ++Y +++ + K
Sbjct: 396 GIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKV 455
Query: 182 EKCFKEWESGCATYD 196
+ +KE E T D
Sbjct: 456 SEVYKEMEGAGCTPD 470
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S MPD YN
Sbjct: 24 LFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V + ++S L ++YVE F +A E+
Sbjct: 84 AMINVFGXAKLFREARSLISEMRTAG-VMPNTASYSTLLTMYVENKKFLEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ +R +SY +++V + +
Sbjct: 143 IKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PN+ T+
Sbjct: 203 AIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAVLFQKLRSSG 284
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 168
A L+ DL AY +I ++G E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTA--SYSTL 120
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 229 DPNAKTWEIFSDYYLRNGDMKL 250
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D I AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILAGAGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + GN+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS------NVIALVLNAYGKL 403
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
+ A + E E GC D
Sbjct: 404 HEFDKANDVYMEMQEVGCVFSD 425
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P+S TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAVLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD++ I + G + E ++R A + MI + K
Sbjct: 321 IPRDIA-----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V +++ AY K + A ++
Sbjct: 376 EVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDV 412
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + ALLE+M L +S +N ++ K G ++ +IQEM++ PD +YN
Sbjct: 396 MWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYN 455
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + AE + E + +G V A+ T++ + + G ++ A R KE+
Sbjct: 456 TIIYHLCNNEQMEEAEHMFENLLEEG-VVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D+ +Y LI + GN+ + + N+SY +I L + +
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD 574
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + K+ + DI N +I K G + A L E+ P+ T+ I
Sbjct: 575 ALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634
Query: 241 YYLR 244
++ +
Sbjct: 635 WHCK 638
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 118/261 (45%), Gaps = 7/261 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A A+L ++ ELN+ FN+++ G + + + M PD++TY++
Sbjct: 297 DEARAMLGRVPELNVVL----FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L + IS A R++ EM++ G A + T++ + + + G+++ L+E+ +
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKG-FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 411
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I + G + E + + +R N SY +I L N + + AE
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAE 471
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+ E G I N +I A ++GR ++A L + G + ++
Sbjct: 472 HMFENLLEEGVVANGI-TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKA 530
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
++G++ ++ LE+ + G
Sbjct: 531 MCKDGNVDRSLVLLEEMAEKG 551
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 109/301 (36%), Gaps = 23/301 (7%)
Query: 28 MTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR 87
+ LY + H +++P P ++T+ V RAL + + A ++ M R G
Sbjct: 159 LALYRRMVHRDRVP------------PTTFTFGVAARALCRLGRANEALALLRGMARHGC 206
Query: 88 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
V D + + + G +A L E+ D++ + ++ G + E
Sbjct: 207 V-PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAA 265
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
R+ + ++Y ++Q L ++ A ++ + N +IG
Sbjct: 266 RLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE----LNVVLFNTVIGGC 321
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGG 267
EG+L A EL E +G P+A T+ I + G + AV L + G
Sbjct: 322 LAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKG----- 376
Query: 268 KWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPV 327
+ P+ T + F + D LE + L + + +I GR
Sbjct: 377 -FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEA 435
Query: 328 M 328
M
Sbjct: 436 M 436
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 98/262 (37%), Gaps = 11/262 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A LL +M + F+ ++ G + ++ M MP TY +
Sbjct: 228 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 287
Query: 64 RALAAVNDISGAERVIEEMKRDGRVA-ADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L V A ++ GRV + F+ + + G +A + + +
Sbjct: 288 QGLCRVRQADEARAML------GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAF-PNTANISYLNMIQVLVNLKDLPG 180
D Y L+ + G +S R+ R + + F PN ++Y ++
Sbjct: 342 CQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNV--VTYTIVLHSFCKNGMWDD 399
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+E + T + + N MI A K+GR++ A L + R +G +P+ ++
Sbjct: 400 TRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIY 459
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ N M+ A E ++ G
Sbjct: 460 HLCNNEQMEEAEHMFENLLEEG 481
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 123/306 (40%), Gaps = 15/306 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A + ++M+ L S NS++ A+TG A+ ++M+ + +PD +T +
Sbjct: 190 DGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIM 249
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+A V + A +EEM + G V + + + + Y E G A R L L R
Sbjct: 250 AKAYCKVKGVVHALEFVEEMTKMG-VEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRG 308
Query: 123 AHRDLSAYQFLITLYGQTGNLSE----VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
++ Y L+ Y N+ E V I ++ +L + +N + ++D
Sbjct: 309 FSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMED- 367
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + E ++ V N+MI Y K GR+ A + G P+ ++
Sbjct: 368 --AARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSL 425
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA-EGFLE 297
D Y + G M A + + G + ++ T ++ F +D A +
Sbjct: 426 VDGYCKKGLMNKAFETYNTMLRNG------FAATTLTYNALLKGFCSLGSIDDALRLWFL 479
Query: 298 ILKKAV 303
+LKK +
Sbjct: 480 MLKKGI 485
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 14/256 (5%)
Query: 3 EKAEALLEKM-KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+AE +++++ K L F +++ Y + G E ++ EM S + + + YN+
Sbjct: 330 EEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNI 389
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKA-ERALKELEN 120
+ + + A ++ EM G V D ++++L Y + GL KA E L N
Sbjct: 390 MINGYCKLGRMVEAHNILHEMTGVG-VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRN 448
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
A L+ Y L+ + G++ + R+W + + PN + S L L
Sbjct: 449 GFAATTLT-YNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTL-----LDGFFKS 502
Query: 179 PGAEKCFKEWESGCA---TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
EK W+ A + N +I K R+ AEEL ++ ++ P+ T+
Sbjct: 503 GKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITY 562
Query: 236 EIFSDYYLRNGDMKLA 251
Y + GDM A
Sbjct: 563 RTLFSGYCKIGDMDRA 578
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 8/258 (3%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L+E KE + FS+ F+ L+ A G + + EM+ + N + LA
Sbjct: 162 LVEVYKEFS--FSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLA 219
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
D+ V E+M+R G + D T + +A Y + A ++E+ +L
Sbjct: 220 QTGDLGATVAVFEQMQRAGAL-PDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNL 278
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
AY ++ Y + G ++ R+ SL R PN ++Y +++ N K++ AE
Sbjct: 279 VAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNI--VTYTLLVKGYCNEKNMEEAEGVV 336
Query: 186 KEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+E ++ D V +I Y + GR+E+A L N + I + Y +
Sbjct: 337 QEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCK 396
Query: 245 NGDMKLAVDCLEKAIDTG 262
G M A + L + G
Sbjct: 397 LGRMVEAHNILHEMTGVG 414
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 116/292 (39%), Gaps = 39/292 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++A +L +++ NLGF+ FNSL+T + K+ I+ EM + P++ Y
Sbjct: 576 DRASRILNELE--NLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYG 633
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ D+ A + EM G V + S+L S + G F++A L+ L
Sbjct: 634 ALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFIC-SSLVSCFYRKGKFDEANLVLQNLVG 692
Query: 121 RNAHRDLSAYQ--------FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVL 172
+ D+SA + F+ T+ G GN +W + I + +L
Sbjct: 693 TDMIPDISAPRLEIGKVANFIDTVAG--GNHHSAKIMWNIVIFGLCKLGRIE--DAKNLL 748
Query: 173 VNLKD--LPGAEKCFKEWESGCAT-------YDIRVT-------------NVMIGAYAKE 210
+LKD + GC+ +D+R T N +I K
Sbjct: 749 ADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKS 808
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
G L A L ++ +G PNA T+ D + ++G + A ++ I+ G
Sbjct: 809 GELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEG 860
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 8/239 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A LL +M + L + +N ++ Y K G + I+ EM + PD+Y+YN
Sbjct: 366 EDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSL 425
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA-LKELENR 121
+ ++ A M R+G AA T++ L + G + A R L+
Sbjct: 426 VDGYCKKGLMNKAFETYNTMLRNG-FAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKG 484
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPG 180
A ++S L + ++G + +W+ LA N + N +I L ++ +P
Sbjct: 485 IAPNEISCSTLLDGFF-KSGKTEKALNLWKE-TLARGLAKNTTTFNTVINGLCKIERMPE 542
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE+ + + DI + Y K G ++ A + G P T E F+
Sbjct: 543 AEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAP---TIEFFN 598
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 111/287 (38%), Gaps = 27/287 (9%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEKA L ++ L ++ FN+++ K + ++ +MK PD TY
Sbjct: 505 TEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRT 564
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ D+ A R++ E++ G A F++L + + A K L E+ NR
Sbjct: 565 LFSGYCKIGDMDRASRILNELENLG-FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNR 623
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW---------------RSLRLAFPNTANISYL 166
+ AY LI + + G+L Y ++ SL F
Sbjct: 624 GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683
Query: 167 NMI-QVLVNLKDLP---------GAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLEN 215
N++ Q LV +P G F + +G + ++ N++I K GR+E+
Sbjct: 684 NLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIED 743
Query: 216 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
A+ L + +G + T+ +G + +A D + + G
Sbjct: 744 AKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVG 790
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 104/239 (43%), Gaps = 16/239 (6%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA-VNDISGAERVIEEMK 83
+SL++ + + G ++ ++Q + + ++PD + + +A ++ ++G
Sbjct: 668 SSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNH------ 721
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
++ + F + G E A+ L +L+++ D Y LI +G +
Sbjct: 722 HSAKIMWNIVIFG-----LCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFV 776
Query: 144 SEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGAEKCFKE-WESGCATYDIRVTN 201
+ + R L+ T NI +Y ++I L +L A FK+ W G + I N
Sbjct: 777 DVAFDL-RDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAI-TYN 834
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
+I + K+G + A +LK+R G P T+ I + G M+ A+ L++ I+
Sbjct: 835 TLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIE 893
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+++ L+ G L +++ +R + S +++ L DL F++
Sbjct: 174 ASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQ 233
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ A D +M AY K + +A E E + G + N + + Y G
Sbjct: 234 MQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQ 293
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK----AV 303
A + +D+ G G + P+ T ++ + EK+++ AEG ++ ++K V
Sbjct: 294 TNDA----RRMLDSLPGRG--FSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVV 347
Query: 304 DDLGVEVFEPLIRTYAAAGR 323
D+ VF +I Y GR
Sbjct: 348 DE---AVFGAVINGYCQMGR 364
>gi|255661178|gb|ACU25758.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 352
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S MPD YN
Sbjct: 24 LFDAALSWLQKMEQDRVPGDLVLYSNLIELSXKLCDYSKAISIFSRLKRSGFMPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V + ++S L ++YVE F +A E+
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAG-VMPNTASYSTLLTMYVENKKFLEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ +R +SY +++V + +
Sbjct: 143 IKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PN+ T+
Sbjct: 203 AIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAMLFQKLRSSG 284
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSXKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 168
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA--SYSTL 120
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 229 DPNAKTWEIFSDYYLRNGDMKL 250
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P+S TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAY 130
RD++ +
Sbjct: 321 IPRDIAIH 328
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 75/166 (45%), Gaps = 1/166 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ +M+E+ N ++ +Y + G ++ + M+ I P+ +YN +
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLL 191
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R A + M+R + + T++++ IY + EKA ++E++NR
Sbjct: 192 RVYGDAELFGEAIHLFRLMQRKN-IEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGI 250
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
+ Y +I+++G+ G L +++ LR + + Y MI
Sbjct: 251 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMI 296
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A+ L M+++ + + + +N+L+ +Y + + + M+ +I + TYN
Sbjct: 164 MAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 223
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
M + A +I+EM+ G + + T+S + SI+ + G ++A ++L +
Sbjct: 224 SMMMIYGKTLEHEKANNLIQEMQNRG-IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 282
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
D YQ +I Y + G ++ R+ L+
Sbjct: 283 SGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELK 316
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 50/89 (56%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAAD 91
+ A ++ A+R++ E+KR + D
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRD 324
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S PD YN
Sbjct: 26 LFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 85
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EMK G V + ++S L ++YVE F +A E+
Sbjct: 86 AMINVFGKAKLFREARSLISEMKXSG-VMPNTASYSTLLTMYVENKKFLEALSVFSEMRE 144
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ +R +SY +++V + +
Sbjct: 145 VKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGE 204
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N MI Y K E A L + + RG +PN+ T+
Sbjct: 205 AIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIIS 264
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 265 IWGKVGKLDRAAMLFQKLRSSG 286
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 46 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
EM+ ++ PD YTY+ + A +++M++D RV D +SNL + +
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKL 59
Query: 106 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 163
+ KA L+ DL AY +I ++G+ E + ++ + PNTA
Sbjct: 60 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTA-- 117
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 118 SYSTLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 177
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKL 250
R+ G +PN ++ Y GD +L
Sbjct: 178 RKMGIEPNVVSYNTLLRVY---GDAEL 201
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS++ +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 204 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 263
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 264 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 322
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 323 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVV 377
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V +++ AY K + A ++
Sbjct: 378 EVFDKMRGLGYFPDSDVIALVLNAYGKLHEFDKANDV 414
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 238 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 297
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 298 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 352
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANIS 164
+D++ ++ +I L Y + N+ EV+ R L FP++ I+
Sbjct: 353 EVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGY-FPDSDVIA 396
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 127/301 (42%), Gaps = 7/301 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A L+++M ++ +N+L+ Y + G E+ + +EM A S +PD TY
Sbjct: 275 VDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTC 334
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R + + A ++E MK + D T+S + + Y A F +A ++E+ R
Sbjct: 335 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N + Y LI + G ++ + +++ P+ ++Y +I+ L A
Sbjct: 395 NVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK--PDV--VTYTIVIEGLCGTDRTEEA 450
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+E + + N +IGA + G ++ A +L G +P T+ +
Sbjct: 451 LTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEG 510
Query: 242 YLRNGDMKLAVDCLEKAIDTGR--GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
+ R G M++A + E + VP + +R + +++D A +E L
Sbjct: 511 FSRTGRMEIAYELFEVMRRKAKKSSSAANLVP-EQAFSALIRGLCKAREIDKAMAVVEEL 569
Query: 300 K 300
+
Sbjct: 570 R 570
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 14/247 (5%)
Query: 52 IMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-VAADWTTFSNLASIYVEAGLFEK 110
+ P+ TYNV + L S A V++EM RDG+ VA D T+S + + + + G ++
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDR 63
Query: 111 AERALKELENRNAHR-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
A L+E+ R+ D+ Y ++ + G + + R ++L ++ +I
Sbjct: 64 ACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 123
Query: 170 QVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRR--G 227
N + + A K +KE + D ++ +I +E R+ A EL + R G
Sbjct: 124 TGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDG 183
Query: 228 A-DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT-GRGDGGKWVPSSETIRTFMRHFEQ 285
A P+ T+ D + ++G+ LEKA+ G +G K VP+ T + + +
Sbjct: 184 AWKPDVVTYTALIDGFCKSGN-------LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCK 236
Query: 286 EKDVDGA 292
D+D A
Sbjct: 237 AGDLDQA 243
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 120/305 (39%), Gaps = 12/305 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMK-ASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM 82
+N ++ K K +++EM+ S+ PD TY+ + ++ A ++ EM
Sbjct: 12 YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 71
Query: 83 -KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
RDG +A D T++++ G ++A ++E++ + D + LIT +
Sbjct: 72 VTRDG-MAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW---ESGCATYDIR 198
+ E ++++ + + +S +I L + + A + F+E E G D+
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
+I + K G LE A ++ R PN T+ + GD+ A+D +
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
G VP+ T T + VD A ++ + + L+ Y
Sbjct: 251 TSKG------CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304
Query: 319 AAAGR 323
GR
Sbjct: 305 CRLGR 309
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 144/367 (39%), Gaps = 46/367 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E L E + + + + S++ + G ++ +++EMK + PD +T++
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120
Query: 61 V----WMRA-------------------LAAVND---ISGA--ERVIE---------EMK 83
W A L AV+ I+G ER I EM+
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
DG D T++ L + ++G EKA + L +E R ++ Y L+ + G+L
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+ ++R + + PN ++Y +I L + A E + C D N
Sbjct: 241 DQALDLFRRMTSKGCVPNV--VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYN 298
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
++ Y + GR+E A++L + + P+ T+ + ++ A LE + T
Sbjct: 299 ALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN-MKT 357
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
G V S + + R ++ V+ AE E++ + V V + LI A
Sbjct: 358 AAGIDPDVVTYSIVVAGYSR---AKRFVEAAEFIQEMIARNVAPNAV-TYSSLIDGLCKA 413
Query: 322 GRTSPVM 328
GR + M
Sbjct: 414 GRVNHAM 420
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 98/254 (38%), Gaps = 35/254 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA +L M+ + + ++SL+ K G ++ + + M + +P+ TY
Sbjct: 206 EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL 265
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A + + A +++EM AD +++ L Y G E+A++ KE+ ++
Sbjct: 266 IHGLCAAHKVDAARLLMDEMTATC-CPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKS 324
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y L+ + L E + L N+K G +
Sbjct: 325 CLPDRITYTCLVRGFCNASRLEEARFL----------------------LENMKTAAGID 362
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
D+ ++++ Y++ R A E + R PNA T+ D
Sbjct: 363 P------------DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410
Query: 243 LRNGDMKLAVDCLE 256
+ G + A++ L+
Sbjct: 411 CKAGRVNHAMEVLK 424
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 128/322 (39%), Gaps = 11/322 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E++ +LE+M FN +M +A++ + EK + Q M S PD+ +Y++
Sbjct: 27 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 86
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ LA + + + +++ EM G+ + +S+L +A + A E+
Sbjct: 87 IHGLAKIGKLDESLKILSEMVMRGQTPS-MQAYSSLVRALAKARRVDHASSLFDEMIRGG 145
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
H D + LI Q G + + ++ + PN Y ++ L + L
Sbjct: 146 HHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVP--VYNVLLHGLCSSGQLEQ 203
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F E +S + D+ N ++ A K R+E +L E R G PN T+
Sbjct: 204 ANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIH 263
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
R G+++ A++ ++ G P+ T T + + + V A E +
Sbjct: 264 GLCRTGELEKALEVFGSMLEAG------CKPNKYTYTTLISGLCRAEKVIQARELFEKMT 317
Query: 301 KAVDDLGVEVFEPLIRTYAAAG 322
+A + LI Y G
Sbjct: 318 QACIPPDAVAYNSLIAGYCKRG 339
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 93/229 (40%), Gaps = 1/229 (0%)
Query: 12 MKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVND 71
M++ N+ + ++S++ K PE+ +++EM A+ PD + +N M+ A N+
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 72 ISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQ 131
+ A V + M G D ++ L + G +++ + L E+ R + AY
Sbjct: 61 MEKAREVYQHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119
Query: 132 FLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESG 191
L+ + + ++ + + + + +I L + A + FK+
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179
Query: 192 CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
++ V NV++ G+LE A L + P+ T+ D
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLD 228
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 82/216 (37%), Gaps = 35/216 (16%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
+ ++M + I PD+ YN + + AE++ EM + TF+ L +
Sbjct: 312 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 371
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+ G +A + E+ + D Y+ LI + L E +++ +R
Sbjct: 372 CKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMR-------- 423
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
EK F C ++ +G K G ++ A + E
Sbjct: 424 -------------------EKKFLLDPVSCVSF--------VGGLCKTGNIDQAYAVFEA 456
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
R+ GA PN +T+ I S+ ++ G ++ A +E A
Sbjct: 457 TRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPA 492
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 9/248 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + +L S + FN+LM Y K G ++ + M+AS + PD YTY+V +
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM +G V + TF+ L + + G + A K++ +++
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + I+Y +I DL A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA--- 330
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E+ +IR+ +V +I +EGR +AE++ G P T+ + +
Sbjct: 331 -FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389
Query: 241 YYLRNGDM 248
+ + GD+
Sbjct: 390 EFCKKGDV 397
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 2/191 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M + L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A+ +I+EM G + D T++ L + G E A K + N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKG-LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G + ++ R + +Y +I D+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 183 KCFKEWE-SGC 192
K KE + GC
Sbjct: 402 KLLKEMQRDGC 412
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/199 (18%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M + +I A+ V + + + + +F+ L + Y++ G ++ R
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
++ D+ Y LI + + + ++ + PN +++ +I
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ A++L + +G P+ T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GD++ A +
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L E+MKEL +S +NSL+ YA+ G EK + M+ +PD YTYN
Sbjct: 188 DEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTV 247
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + AE V EM+R G D T++ + Y + +A LK ++
Sbjct: 248 IDMCGRGGLFAEAEGVFLEMQRKG-CTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAG 306
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL Y L+ G+ G+ SE +I+ L+ A + +S+ +I + L AE
Sbjct: 307 CTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAE 366
Query: 183 KCFKEWE-SGCATYDIRVTNVMIGAYAKEG 211
+ + E +GC +M +Y+ G
Sbjct: 367 RAWVEMRATGCVPNATAYCGLM-NSYSHHG 395
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 100/240 (41%), Gaps = 1/240 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
L E+MK+ + + + +N ++ + I++EMKA + +P+ +Y + +L
Sbjct: 122 GLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSL 181
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ A + EEMK GR WT +++L Y G +EKA +E+ D
Sbjct: 182 GRSGRLDEAVELFEEMKELGRSPNSWT-YNSLLKAYAREGRYEKAMCLFVGMEDEGCIPD 240
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
L Y +I + G+ G +E ++ ++ ++Y M+ A K
Sbjct: 241 LYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLK 300
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ T D+ N+++ A K G A ++ + G PN ++ + Y R G
Sbjct: 301 TMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLG 360
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 8/242 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + E M + + S + +L++ YAK G ++ A+ + MK P+ TYN +
Sbjct: 49 AREIFEGMSKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLIN 108
Query: 65 ALAA----VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
A + D+ G + EEMK+ G V + T++ + + V LF+ A + LKE++
Sbjct: 109 ACTKRAYRLPDLVG---LFEEMKQAG-VQPNDITYNCMVNACVCLSLFDTASQILKEMKA 164
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
N ++ +Y +I G++G L E ++ ++ + + +Y ++++
Sbjct: 165 VNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEK 224
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F E D+ N +I + G AE + +R+G P+ T+ D
Sbjct: 225 AMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLD 284
Query: 241 YY 242
Y
Sbjct: 285 AY 286
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 107/250 (42%), Gaps = 1/250 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A +L++MK +N + + + +++ ++G ++ + +EMK P+S+TYN
Sbjct: 151 LFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYN 210
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
++A A A + M+ +G + D T++ + + GLF +AE E++
Sbjct: 211 SLLKAYAREGRYEKAMCLFVGMEDEGCI-PDLYTYNTVIDMCGRGGLFAEAEGVFLEMQR 269
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D Y ++ Y + + ++++ A +Y ++
Sbjct: 270 KGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASE 329
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + F E ++ + ++ + +I Y + G E AE R G PNA + +
Sbjct: 330 AMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMN 389
Query: 241 YYLRNGDMKL 250
Y +G K+
Sbjct: 390 SYSHHGMYKV 399
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 9/231 (3%)
Query: 75 AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLI 134
A + E M + G VA ++ L S Y + GL ++A + ++ + ++ Y LI
Sbjct: 49 AREIFEGMSKAG-VAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLI 107
Query: 135 TLYGQTG-NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCA 193
+ L ++ ++ ++ A +I+Y M+ V L A + KE ++
Sbjct: 108 NACTKRAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNC 167
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
++ MI + + GRL+ A EL E + G PN+ T+ Y R G + A+
Sbjct: 168 LPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAM- 226
Query: 254 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEG-FLEILKKAV 303
+ G D G +P T T + + AEG FLE+ +K
Sbjct: 227 ----CLFVGMEDEG-CIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGC 272
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+KM++ + + +++L+ L K K +I +K S MPD YN +
Sbjct: 35 LQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGK 94
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V + ++S L ++YVE F +A E+ DL+
Sbjct: 95 AKLFREARALISEMKTAG-VMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLT 153
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ G E +++ +R +SY +++V + + A F+
Sbjct: 154 TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLM 213
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N M+ Y K E A L + + RG +PN+ T+ + + G +
Sbjct: 214 QRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKL 273
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 274 DRAAMLFQKLRSSG 287
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 8/207 (3%)
Query: 46 EMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEA 105
EM+ ++ PD YTY+ + A +++M++D RV D +SNL + +
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKL 60
Query: 106 GLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANI 163
+ KA L+ DL AY +I ++G+ E + ++ A PNTA
Sbjct: 61 CDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTA-- 118
Query: 164 SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 119 SYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKL 250
R+ G +PN ++ Y GD +L
Sbjct: 179 RKMGIEPNVVSYNTLLRVY---GDAEL 202
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 15/238 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P+S TY+ +
Sbjct: 205 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 264
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL++ N
Sbjct: 265 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDN 323
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI + K
Sbjct: 324 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANVV 378
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + D V +++ AY K L+ A ++ + G IFSD
Sbjct: 379 EVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQEVGC--------IFSD 428
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+K + D T LA AG E+A ++ +
Sbjct: 299 IVAYERAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 353
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I +++N L
Sbjct: 354 EVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGY-FPDS------NVIALVLNAYGKL 406
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
+L A + E E GC D
Sbjct: 407 HELDKANDVYMEMQEVGCIFSD 428
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 17/268 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ A LL +M++ G + P +N + K+G + +++ MK + PD T+N
Sbjct: 35 QAAMDLLREMEQ-QPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFN 93
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L + A++V++EM+R G AA+ T++ L + AG ++ A+ ++
Sbjct: 94 TLIAGLCKAGRLDEAQQVLDEMERSG-FAANLVTYNTLINGLSSAG---RSGEAVLVMQG 149
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL---AFPNTANISYLNMIQVLVNLKD 177
D Y +I + ++G + Y ++ P+T +Y +I L +
Sbjct: 150 MTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT--FTYSILINGLCKSSN 207
Query: 178 LPGAEKCFKEW---ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
L A++ +E + CA+ + N ++ Y K L+ A EL G P+ T
Sbjct: 208 LRKADELLQEMIGRKDCCAS--VVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVT 265
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ D R GD+ LEK + G
Sbjct: 266 YSTIIDGLCRCGDVDKGFALLEKMVSRG 293
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 4/262 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ +L++M+ + + +N+L+ + G + ++Q M + PD+ TYN
Sbjct: 106 DEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAI 162
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR- 121
+ +I A +EEMK+ + D T+S L + ++ KA+ L+E+ R
Sbjct: 163 IHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRK 222
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + A+ L+ Y + +L + S+ ++Y +I L D+
Sbjct: 223 DCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKG 282
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
++ S D+ V++ K G++ A L +R G PNA T+ + D
Sbjct: 283 FALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDG 342
Query: 242 YLRNGDMKLAVDCLEKAIDTGR 263
+ + +A D L D GR
Sbjct: 343 LCKIDKLDMANDLLTSIRDKGR 364
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 109/248 (43%), Gaps = 19/248 (7%)
Query: 55 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
D+YTY V +RA ++ A ++ EM++ +A + ++ ++G +A
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLV 173
+K +++ D+ + LI + G L E ++ + R F AN+ N L+
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGF--AANLVTYN---TLI 131
Query: 174 N-LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENA----EELKERARRRGA 228
N L + + + T D + N +I + K G ++ A EE+K+RA G
Sbjct: 132 NGLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRA---GC 188
Query: 229 DPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
P+ T+ I + ++ +++ A + L++ I GR D S T + + + +D
Sbjct: 189 SPDTFTYSILINGLCKSSNLRKADELLQEMI--GRKD---CCASVVAFNTLVDGYCKAQD 243
Query: 289 VDGAEGFL 296
+D A L
Sbjct: 244 LDRARELL 251
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 9/137 (6%)
Query: 165 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
Y + L +P A + K + G D+ N +I K GRL+ A+++ +
Sbjct: 57 YNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEME 116
Query: 225 RRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFE 284
R G N T+ + G AV ++ G P ++T + F
Sbjct: 117 RSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ---------GMTTTPDTQTYNAIIHGFC 167
Query: 285 QEKDVDGAEGFLEILKK 301
+ ++D A GFLE +K+
Sbjct: 168 KSGEIDRAYGFLEEMKQ 184
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 14/281 (4%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
M +N+++ Y TG + ++ +M + PDSYTYN +R L A V+++
Sbjct: 125 MAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLDD 181
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M R G V D T++ L + +++A + L E+ + D+ Y ++ Q G
Sbjct: 182 MLRRGCVP-DVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEG 240
Query: 142 NLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
+ + +SL PNT +SY +++ L + AEK E ++
Sbjct: 241 RVDDAIEFLKSLPSHGCEPNT--VSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
N++I + G +E A E+ ++ + G PN+ ++ + + M A+ +E +
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
G P + T + + +VD A L LK
Sbjct: 359 SRG------CYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 393
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 117/298 (39%), Gaps = 17/298 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L+E M L + P +L+ +G + ++ ++ PD YN
Sbjct: 76 EEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AACEPDVMAYNAM 130
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A R++ +M + D T++ L G A L ++ R
Sbjct: 131 VAGYCVTGQLDAARRLVADMPME----PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRG 186
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y L+ + + ++ +R I+Y ++ + + A
Sbjct: 187 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAI 246
Query: 183 KCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ K S GC + V+ G E R E+AE+L ++G PN T+ + +
Sbjct: 247 EFLKSLPSHGCEPNTVSYNIVLKGLCTAE-RWEDAEKLMAEMSQKGYPPNVVTFNMLISF 305
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 299
R G ++ A++ L++ G P+S + + F ++K +D A F+E++
Sbjct: 306 LCRRGLVEPAMEVLDQIPKYG------CTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 106/263 (40%), Gaps = 7/263 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL++M+ + +N ++ + G + ++ + + P++ +YN+
Sbjct: 208 KQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIV 267
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L AE+++ EM + G + TF+ L S GL E A L ++
Sbjct: 268 LKGLCTAERWEDAEKLMAEMSQKG-YPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y ++ + + + + R +P+ +SY ++ L ++
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDI--VSYNTLLTALCRGGEVDA 384
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + + + GC I N +I K G+ + A EL +G P+ T+ S
Sbjct: 385 AVELLHQLKDKGCTPVLISY-NTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTIS 443
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
R ++ A+ K D G
Sbjct: 444 SGLCREDRIEEAIRAFCKVQDMG 466
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 100/245 (40%), Gaps = 7/245 (2%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIE 80
S +N+L+ G ++ +M +PD TY + + A + A ++++
Sbjct: 156 SYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLD 215
Query: 81 EMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQT 140
EM+ G A D T++ + + + G + A LK L + + +Y ++
Sbjct: 216 EMRAKG-CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA 274
Query: 141 GNLSEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDL--PGAEKCFKEWESGCATYDI 197
+ ++ + + +P N+ NM+ + + L P E + + GC +
Sbjct: 275 ERWEDAEKLMAEMSQKGYP--PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSL 332
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
N ++ A+ K+ +++ A E RG P+ ++ R G++ AV+ L +
Sbjct: 333 SY-NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391
Query: 258 AIDTG 262
D G
Sbjct: 392 LKDKG 396
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/133 (18%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A +L+++ + +S+ +N ++ + K ++ A ++ M + PD +YN
Sbjct: 311 LVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYN 370
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ AL ++ A ++ ++K G +++ + +AG ++A L E+
Sbjct: 371 TLLTALCRGGEVDAAVELLHQLKDKGCTPV-LISYNTVIDGLTKAGKTKEALELLNEMVT 429
Query: 121 RNAHRDLSAYQFL 133
+ D+ Y +
Sbjct: 430 KGLQPDIITYSTI 442
>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 426
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+KM++ + + +++L+ L K K +I +K S PD YN +
Sbjct: 32 LQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKNSGYTPDLVAYNAMIIVFGK 91
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V + T++S L ++YVE F +A E+ DL+
Sbjct: 92 AKLFREARSLISEMKTAG-VIPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLT 150
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ G E +++ +R +SY +++V + + A F+
Sbjct: 151 TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLM 210
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N MI Y K E A L + + RG +PN+ T+ + + G +
Sbjct: 211 QRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKL 270
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 271 DRAAMLFQKLRSSG 284
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D +V D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 168
A L+N DL AY +I ++G+ E + ++ A PNT SY +
Sbjct: 63 AISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTT--SYSTL 120
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 229 DPNAKTWEIFSDYYLRNGDMKL 250
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 15/238 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS++ +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 321 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVV 375
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + D V +++ AY K + A ++ + G +FSD
Sbjct: 376 EVFDKMRGLGYFPDSNVIAIVLNAYGKLHEFDKANDVYMEMQEVGC--------VFSD 425
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 236 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGY-FPDS------NVIAIVLNAYGKL 403
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
+ A + E E GC D
Sbjct: 404 HEFDKANDVYMEMQEVGCVFSD 425
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 111/245 (45%), Gaps = 5/245 (2%)
Query: 4 KAEALLEKMKELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
KA ++ ++K N G++ + +N+++ ++ K + ++I EMK + ++P++ +Y+
Sbjct: 62 KAISIFSRLK--NSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYST 119
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A V EM R+ + D TT + + +Y + G+ ++A++ +
Sbjct: 120 LLTMYVENKKFLEALSVFSEM-REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ +Y L+ +YG E ++R ++ ++Y +MI + + A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 238
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+E +S + + +I + K G+L+ A L ++ R G + + ++
Sbjct: 239 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 298
Query: 242 YLRNG 246
Y R G
Sbjct: 299 YERAG 303
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM+ Y + G ++ + M AS + PD YTY+V +
Sbjct: 144 AQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 203
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + A + +EM G V TF+ L + + G + A K++ +++
Sbjct: 204 GLCKEXKMDEANELFDEMLVXGLVPXG-VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 262
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + GBL + + + + L I+Y +I DL A +
Sbjct: 263 PDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEH 322
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I +EGR +AE++ G P+ +T+ + + + +
Sbjct: 323 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCK 382
Query: 245 NGDM 248
GD+
Sbjct: 383 KGDV 386
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 90/236 (38%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L ++M L + F +L+ + K G + I ++M + S++PD TYN
Sbjct: 212 DEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTL 271
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L B+ A +I EM G D T++ L + G + A K + N
Sbjct: 272 IYGLCKKGBLKQAHVLIXEMSLKGX-KPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 330
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G RS+ AE
Sbjct: 331 IRLDDVAYTALISGLCQEG---------RSV--------------------------DAE 355
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E S D R ++I + K+G + +L + +R G P+ T+ +
Sbjct: 356 KMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 411
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/209 (18%), Positives = 79/209 (37%), Gaps = 1/209 (0%)
Query: 45 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 104
QE+ Y +N+ M +I A+ V + + + G + +++ L S Y+
Sbjct: 114 QEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWG-LRPSVVSYNTLMSGYIR 172
Query: 105 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 164
G ++ R + D+ Y LI + + E ++ + + ++
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVT 232
Query: 165 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
+ +I + A + +K+ S D+ N +I K+G L+ A L
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMS 292
Query: 225 RRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
+G P+ T+ D + GD+ A +
Sbjct: 293 LKGXKPDKITYTTLIDGCCKEGDLDTAFE 321
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 142 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 201
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + TF+ L + + G + A K++ +++
Sbjct: 202 GLCKESKMDDANELFDEMLVKGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 260
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A +
Sbjct: 261 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEH 320
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I +EGR +AE++ G P+++T+ + + + +
Sbjct: 321 RKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCK 380
Query: 245 NGDM 248
GD+
Sbjct: 381 KGDV 384
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 210 DDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 269
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM + D T++ L + G + A K + N
Sbjct: 270 IYGLCKKGDLKQAHHLIDEMSMK-ELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQEN 328
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G + ++ R + LN V LK
Sbjct: 329 IRLDEVAYTALISGLCQEGRSVDAEKMLREM------------LN-----VGLKP----- 366
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
D R ++I + K+G + +L + +R G P+ T+ +
Sbjct: 367 -------------DSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 409
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/197 (17%), Positives = 77/197 (39%), Gaps = 1/197 (0%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + + G + +++ L + Y+ G ++ R
Sbjct: 124 YFFNILMHRFCKDGDIRVAQSVFDAITKWG-LRPSVVSYNTLMNGYIRLGDLDEGFRLKS 182
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ D+ Y LI + + + ++ + + +++ +I
Sbjct: 183 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 242
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ A + +K+ S + D+ N +I K+G L+ A L + + P+ T+
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYT 302
Query: 237 IFSDYYLRNGDMKLAVD 253
D + GD+ A +
Sbjct: 303 TLIDGCCKEGDLDSAFE 319
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 13/283 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +A ALLE MK + ++ +N ++T K G ++ ++ M +S PD YTYN+
Sbjct: 20 TRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNI 79
Query: 62 WMRALAAVNDISGAERVIEEMK-RDGRVAADWTTFSNLASIYVEAG----LFEKAERALK 116
+ AL V + A+ ++E M+ RD D T++ L G E+A R +
Sbjct: 80 LINALCKVGRLEDAQGLVEMMQARD--CPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFE 137
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN---ISYLNMIQVLV 173
E+ ++ Y +I + + ++ L L N ++Y +I
Sbjct: 138 EMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKV---LDLMHENGCAFDLVTYNMLINRFA 194
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
+ A F E + D+ N ++ + K G++E A +L + RG PN +
Sbjct: 195 KAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGR 254
Query: 234 TWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETI 276
T+ +D L+ G M+ A L + G D +V TI
Sbjct: 255 TYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTI 297
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A+ +L+ M E F + +N L+ +AK G +K + EM +PD TYN
Sbjct: 163 MDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYN 222
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A ++ EMK G + + T++++ ++AG + A L E+
Sbjct: 223 SVVDGFCKAGKVEEANKLFAEMKARG-IFPNGRTYTSITDACLKAGRMQDAHAYLVEMR- 280
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ D +Y LI+ + G +++ R +
Sbjct: 281 KEGLVDAISYVALISTICKLGKGKLGFQLLREM 313
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 113/248 (45%), Gaps = 9/248 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 161 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLIN 220
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A ++ +EM G V + TF+ L + + G + A K++ +++
Sbjct: 221 GLCKESKMDDANKLFDEMLEKGLV-PNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLL 279
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A
Sbjct: 280 PDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAF-- 337
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E +IR+ +V +I +EGR +AE++ G P+ +T+ + +
Sbjct: 338 --EHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIIN 395
Query: 241 YYLRNGDM 248
+ + GD+
Sbjct: 396 EFCKKGDV 403
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 94/236 (39%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M E L +S+ F +L+ + K G + I ++M + S++PD TYN
Sbjct: 229 DDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNAL 288
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM G + D T++ L + G + A K + N
Sbjct: 289 IYGLCKKGDLKQAHDLIDEMSMXG-LKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQEN 347
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G RS+ AE
Sbjct: 348 IRLDDVAYTALISGLCQEG---------RSV--------------------------DAE 372
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E S D R ++I + K+G + +L + +R G P+ T+ +
Sbjct: 373 KMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + + G + +++ L + Y+ G ++ R
Sbjct: 143 YFFNILMHRFCKEGDIRVAQSVFDAITKWG-LRPSVVSYNTLMNGYIRLGDLDEGFRLKS 201
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
+ H D+ Y LI + + + +++ + + PN+ + L
Sbjct: 202 AMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNG 261
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
DL A + +K+ S D+ N +I K+G L+ A +L + G P+ T
Sbjct: 262 WVDL--AMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKIT 319
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GD+ A +
Sbjct: 320 YTTLIDGCCKEGDLDTAFE 338
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 144/330 (43%), Gaps = 22/330 (6%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E AE +L+KM++ ++ + + F+S++ YAK G K ++++M +IMP+ + Y +
Sbjct: 392 VEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAI 451
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A +EMK G + + F L + +G ++A+ +K++ ++
Sbjct: 452 LLDGYFRTGQHEAAAGFYKEMKSWG-LEENNIIFDILLNNLKRSGGMKEAQSLIKDILSK 510
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ D+ Y L+ Y + GN S + + + ++Y + + L+ L
Sbjct: 511 GIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK 570
Query: 182 EKCFKEWESG----CATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ E G C TY N ++ Y +G+ ENA +L + G PN T+ I
Sbjct: 571 SVFSRMIELGLTPDCVTY-----NSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNI 625
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
+ G ++ + L + + G +VP+ + ++ + + + A+ L+
Sbjct: 626 LIGGLCKTGAIEKVISVLHEMLAVG------YVPTPIIHKFLLKAYSRSRK---ADAILQ 676
Query: 298 ILKKAVD---DLGVEVFEPLIRTYAAAGRT 324
I KK VD +L V+ LI G T
Sbjct: 677 IHKKLVDMGLNLNQMVYNTLITVLCRLGMT 706
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 138/346 (39%), Gaps = 11/346 (3%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
+++ +M EL L + +NS+M Y G E ++ EMK+ +MP+ TYN+ +
Sbjct: 570 KSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGG 629
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
L I V+ EM G V L Y + + + K+L + +
Sbjct: 630 LCKTGAIEKVISVLHEMLAVGYVPTP-IIHKFLLKAYSRSRKADAILQIHKKLVDMGLNL 688
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
+ Y LIT+ + G + + + + + ++Y +I+ + A +
Sbjct: 689 NQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTY 748
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+ + +I N ++ + G + +A++L R RG PNA T+ I + R
Sbjct: 749 SQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRV 808
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 305
G+ + ++ + I G ++P++ T ++ + + + A L +
Sbjct: 809 GNKRDSIKLYCEMITKG------FIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRI 862
Query: 306 LGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKKLLEAIC 351
++ LI + P M R LK+ +KKLL +C
Sbjct: 863 PNSSTYDVLICGWCKL-SCQPEMDRLLKL---SYQNEAKKLLREMC 904
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
Query: 33 KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 92
K G ++ + Q + +++P+ TY + V D+ AE V+++M+++ V +
Sbjct: 353 KAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKE-HVLPNV 411
Query: 93 TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
TFS++ + Y + G+ KA L+++ N ++ Y L+ Y +TG ++
Sbjct: 412 VTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKE 471
Query: 153 LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGR 212
++ NI + ++ L + A+ K+ S D+ + ++ Y KEG
Sbjct: 472 MKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGN 531
Query: 213 ----LENAEELKER 222
L +E+ E+
Sbjct: 532 ESAALSVVQEMTEK 545
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
MT+KA +L +M + + +N+L+ Y H EK +M S I P+ TYN
Sbjct: 705 MTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYN 764
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ L+ + A++++ EM+ G V + TT++ L S + G + + E+
Sbjct: 765 ALLEGLSTNGLMRDADKLVSEMRERGLV-PNATTYNILVSGHGRVGNKRDSIKLYCEMIT 823
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYL 166
+ Y LI Y + G + + + + R PN++ L
Sbjct: 824 KGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVL 871
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 60/356 (16%), Positives = 124/356 (34%), Gaps = 55/356 (15%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
F + +N+++ + K G ++ ++ EM + DS T N+ ++ + + AE +
Sbjct: 73 FDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWI 132
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+ + G V D + L Y E GL +A +++ D+ Y L+ +
Sbjct: 133 MGNLVGGG-VPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFC 191
Query: 139 QTGNLSEVYRI-----------------------WRSLRLAFPNTANISYLNMIQVLVNL 175
+ G+L++ + W LR P +++ +I
Sbjct: 192 KRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTV--VTWTTLIAAYCKH 249
Query: 176 KDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ + +++ D+ + ++ + G+L A L G DPN ++
Sbjct: 250 RGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSY 309
Query: 236 EIFSDYYLRNG-------------------DMKLAVDCLEKAIDTGRGDGGK-------- 268
L++G D+ L ++ G+ +
Sbjct: 310 TTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILK 369
Query: 269 --WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
VP+ T + + DV+ AE L+ ++K V F +I YA G
Sbjct: 370 LNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKG 425
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 110/282 (39%), Gaps = 30/282 (10%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + AE ++ + + ++ N+L+ Y + G + ++++ + + PD TYN
Sbjct: 125 LVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYN 184
Query: 61 VWMRALAAVNDISGAERVIEEM---KRDGRVAA-------DWTTFSNLASIYVEAGLFEK 110
+ A D++ AE V+ E+ +RD W +L V
Sbjct: 185 TLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIA 244
Query: 111 AERALKELENRNAHRDLSAYQFLI-------------TLYG--QTGNLSEVYRIWRSLRL 155
A ++R S Y+ +I LYG + G L+E + R +
Sbjct: 245 AY-----CKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYN 299
Query: 156 AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLEN 215
+ ++SY +I L+ + A + + D+ + M+ K G+ +
Sbjct: 300 MGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKE 359
Query: 216 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
AEE+ + + PN T+ D + + GD++ A L+K
Sbjct: 360 AEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQK 401
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ + K + ++ M++ PD+ TYN+ + +L + + A +V++++
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
D T++ L + G ++A + L E+ +R D+ Y +I + G +
Sbjct: 217 SDN-CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + R+L L ISY +++ L+N EK + S ++ +++
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I ++G++E A L + + +G P+A +++ + R G + +A++ LE I G
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 109/276 (39%), Gaps = 14/276 (5%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ EM + + PD +TYN +R + + A +I ++ G D +++ L
Sbjct: 246 LLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKG-CEPDVISYNILLRAL 304
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
+ G +E+ E+ + ++ + ++ Y LIT + G + E + + ++
Sbjct: 305 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 364
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
SY +I L A + + S DI N ++ K G+ + A E+ +
Sbjct: 365 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 424
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
G PN+ ++ +GD A+ + + + G P T + +
Sbjct: 425 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGID------PDEITYNSMISC 478
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
+E VD A E+L VD E F P + TY
Sbjct: 479 LCREGMVDKA---FELL---VDMRSCE-FHPSVVTY 507
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 103/243 (42%), Gaps = 15/243 (6%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+ E L+ KM + + ++ L+T + G E+ +++ MK + PD+Y+Y+
Sbjct: 311 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 370
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A + A +E M DG D ++ + + + G ++A +L
Sbjct: 371 IAAFCREGRLDVAIEFLETMISDG-CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN------ISYLNMIQVLVNLK 176
+ S+Y + + +G+ R+L + +N I+Y +MI L
Sbjct: 430 CSPNSSSYNTMFSALWSSGDK------IRALHMILEMVSNGIDPDEITYNSMISCLCREG 483
Query: 177 DLPGAEKCFKEWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ A + + S C + VT N+++ + K R+E+A ++ + G PN T+
Sbjct: 484 MVDKAFELLVDMRS-CEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTY 542
Query: 236 EIF 238
+
Sbjct: 543 TVL 545
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++L+ L K K +I +K S I PD YN + A +I EMK
Sbjct: 47 YSNLIELSRKLCDYSKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMK 106
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V D ++S L ++YVE F +A E+ DL+ +I +YGQ
Sbjct: 107 TAG-VXPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMA 165
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +++ S+R ISY +++V + + A F+ + ++ N M
Sbjct: 166 KEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTM 225
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ Y K E A L + G +PNA T+ + + G + A +K +G
Sbjct: 226 MMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSG 284
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 4/200 (2%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ P+ YTY+ + A ++ M++D RV D +SNL + + + K
Sbjct: 4 ALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A L+ D AY +I ++G+ E + ++ A +SY ++
Sbjct: 63 AISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLT 122
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ V + A F E + D+ N+MI Y + + A++L R+ G +P
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEP 182
Query: 231 NAKTWEIFSDYYLRNGDMKL 250
N ++ Y GD +L
Sbjct: 183 NVISYNTLLRVY---GDAEL 199
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +N++M +Y KT EK +IQEM I P++ TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAXLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + + + G + E ++R A + MI + K
Sbjct: 321 IPRDTAXH-----ILAGAGRIEEATWVFRQAIDAGEVKDITVFSRMIDLFSKYKKYANVV 375
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V +++ AY K + A +
Sbjct: 376 EVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAHXV 412
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D I AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRD-----TAXHILAGAGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ + +I L Y + N+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGLGY-FPDS------NVIALVLNAYGKL 403
Query: 176 KDLPGAEKCFKEWES-GCATYD 196
+ A + + GCA D
Sbjct: 404 HEFDKAHXVYMNMQDEGCAFSD 425
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 11/325 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A L KM L +++ +N+L+ G E I + M + +P + TYN
Sbjct: 359 EIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEI 418
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + DI A + ++M + G + + T++ L Y + G A R L+ ++
Sbjct: 419 IKCFCLMGDIQKAMVIFDKMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + + G L ++ + + +++Y +I NL + A
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 183 KCF-KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F K ESG + NVMI ++K + AE + ++G PN T+ F D
Sbjct: 538 ALFWKMVESGNLPSS-QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGF--LEIL 299
RNG LA + + + P+ T + + QE + AE + L L
Sbjct: 597 LCRNGRTGLAFKIFHEM------EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650
Query: 300 KKAVDDLGVEVFEPLIRTYAAAGRT 324
+ V+ + L++ GR
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRC 675
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 5/260 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A+ ++M + +S+ +++L+ G E+ +++EM I P YTY + +
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+L S A ++ +MK+ G V + TF+ L S G FE A ++
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVP-NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRI--WRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
Y LI G + I W + P+T +Y +I+ + D+ A
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ--TYNEIIKCFCLMGDIQKAM 432
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F + ++ ++ N +I Y K+G L NA L E + G P+A T+ +
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
R G ++ A ++ G
Sbjct: 493 SRGGKLEHATSLFYGMMEHG 512
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 117/293 (39%), Gaps = 13/293 (4%)
Query: 12 MKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
+K LN G S + FN+++ + K G ++ I+ + P+++TY +
Sbjct: 191 IKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRN 250
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
+++ A + + M +DG + T+S L + G E+A L+E+ + +
Sbjct: 251 HNLDLAFAMFDRMVKDG-CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYT 309
Query: 130 YQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
Y + G SE + + R PN ++ +I L A + +
Sbjct: 310 YTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ--TFTALISGLSRDGKFEIAIGLYHK 367
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ N +I EGR E A + + G+ P+ +T+ + GD
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
++ A+ +K + G P+ T T + + ++ +++ A LEI+K
Sbjct: 428 IQKAMVIFDKMLKAGSS------PNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 148/356 (41%), Gaps = 12/356 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E L E + + + + S++ + G ++ +++EMK + PD +T++
Sbjct: 93 MDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 152
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A ++ +E+ D T++ L + ++G EKA + L +E
Sbjct: 153 ALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 212
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDL 178
R ++ Y L+ + G+L + ++R + + PN ++Y +I L +
Sbjct: 213 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV--VTYTTLIHGLCAAHKV 270
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A E + C D N ++ Y + GR+E A++L + + P+ T+
Sbjct: 271 DAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCL 330
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+ ++ A LE + T G V S + + R ++ V+ AE E+
Sbjct: 331 VRGFCNASRLEEARFLLEN-MKTAAGIDPDVVTYSIVVAGYSR---AKRFVEAAEFIQEM 386
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAGRTSPVM--LRRLKMEKVEVSEAS-KKLLEAIC 351
+ + V V + LI AGR M L+ + ++VE S + ++ A+C
Sbjct: 387 IARNVAPNAV-TYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALC 441
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 21/301 (6%)
Query: 31 YAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGR-VA 89
+ K ++ A ++M+ + P+ TYNV + L S A V++EM RDG+ VA
Sbjct: 17 FCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVA 74
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNA-HRDLSAYQFLITLYGQTGNLSEVYR 148
D T+S + + + + G ++A L+E+ R+ D+ Y ++ + G +
Sbjct: 75 PDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACE 134
Query: 149 IWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE------WESGCATYDIRVTNV 202
+ R ++L ++ +I N + + A K +KE W+ TY
Sbjct: 135 MVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTY-----TA 189
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+I + K G LE A ++ R PN T+ + GD+ A+D + G
Sbjct: 190 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 249
Query: 263 RGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
VP+ T T + VD A ++ + + L+ Y G
Sbjct: 250 ------CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303
Query: 323 R 323
R
Sbjct: 304 R 304
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 10/228 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+ A L+++M ++ +N+L+ Y + G E+ + +EM S +PD TY
Sbjct: 270 VDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTC 329
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+R + + A ++E MK + D T+S + + Y A F +A ++E+ R
Sbjct: 330 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 389
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N + Y LI + G + + +++ + ++ ++I L L D+ A
Sbjct: 390 NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEA 449
Query: 182 EKCF-----KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
K E G TY ++ +++ GR+E A EL E R
Sbjct: 450 WKLLVAMAAHGLEPGMVTY-----TTLLEGFSRTGRMEIAYELFEVMR 492
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 104/249 (41%), Gaps = 6/249 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA +L M+ + + ++SL+ K G ++ + + M + +P+ TY
Sbjct: 201 EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL 260
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A + + A +++EM D +++ L Y G E+A++ KE+ ++
Sbjct: 261 IHGLCAAHKVDAARLLMDEMTATC-CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF---PNTANISYLNMIQVLVNLKDLP 179
D Y L+ + L E + +++ A P+ ++Y ++ K
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV--VTYSIVVAGYSRAKRFV 377
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + +E + + + +I K GR+++A E+ + + +P+ T+
Sbjct: 378 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVI 437
Query: 240 DYYLRNGDM 248
R GDM
Sbjct: 438 GALCRLGDM 446
>gi|255661208|gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K + I PD YN
Sbjct: 24 LFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGIKPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V D ++S L ++YVE F +A E+
Sbjct: 84 SMINVFGKAKLFREARSLISEMREAG-VVPDTVSYSTLLTMYVENQKFLEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ E +++ S+R +SY +++V + +
Sbjct: 143 IKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + RG +PNA T+
Sbjct: 203 AIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAMLFQKLRSSG 284
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 4/200 (2%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A L+ DL AY +I ++G+ E + +R A +SY ++
Sbjct: 63 AISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLT 122
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ V + A F E D+ N+MI Y + + A++L R+ G +P
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEP 182
Query: 231 NAKTWEIFSDYYLRNGDMKL 250
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M + +++ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANI 163
+D++ ++ +I L+ + V ++ +R L + + +N+
Sbjct: 351 EVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFSDSNV 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 115/289 (39%), Gaps = 11/289 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ +M+E+ N ++ +Y + ++ + M+ I P+ +YN +
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLL 191
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R A + M+R + + T++ + IY + EKA ++E+ NR
Sbjct: 192 RVYGDAELFGEAIHLFRLMQRKD-IEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGI 250
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y +I+++G+ G L +++ LR + ++ Y MI + A++
Sbjct: 251 EPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKR 310
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E + +++ GA GR+E A + +A G + +E D +
Sbjct: 311 LLHELKRPDNIPRDTAIHILAGA----GRIEEATWVFRQAIDAGEVKDITVFERMIDLFS 366
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+ V+ EK RG G + S I + + + + D A
Sbjct: 367 KYKKYPNVVEVFEKM----RGLG--YFSDSNVISLVLNAYGKLHEFDKA 409
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + +L S + FN+LM Y K G ++ + M+AS + PD YTY+V +
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM +G V + TF+ L + + G + A K++ +++
Sbjct: 215 GLCKESKMDDANELFDEMIDNGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + I+Y +I DL E
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL---ETA 330
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F E+ +IR+ +V +I +EGR +AE++ G P T+ + +
Sbjct: 331 F-EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389
Query: 241 YYLRNGDM 248
+ + GD+
Sbjct: 390 EFCKKGDV 397
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M + L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 223 DDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A+ +I+EM G + D T++ L + G E A K + N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKG-LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D AY LI+ Q G + ++ R +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/199 (18%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M + +I A+ V + + + + +F+ L + Y++ G ++ R
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
++ D+ Y LI + + + ++ + PN +++ +I
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ A++L + +G P+ T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GD++ A +
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332
>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
Length = 818
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 12/291 (4%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+A L E++ + + + +NSL+ Y G ++IP IIQ M+ + PD TY +
Sbjct: 306 EEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTIL 365
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ D+ +V +++ G + + T+S L + + G+F + + L E+ N
Sbjct: 366 IAGHCESGDVEEGMKVRKDVLDQG-LQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIG 424
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL---RLAFPNTANISYLNMIQVLVNLKDLP 179
D+ AY LI Y + G + + ++ ++ + P + N + +++ L L
Sbjct: 425 LDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLN--HFSILLGLCKKGLLV 482
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + D+ NV+I YAK G + NA L ++ G P T
Sbjct: 483 EARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLL 542
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
Y + GD++LA +G +P++ T T M + +V+
Sbjct: 543 YGYCKIGDLQLAESYFRAIQLSG------LLPTAVTYTTLMDALSEAGEVN 587
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 92/217 (42%), Gaps = 1/217 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E L E KE M FN LM+ G + + + M ++PD YT++
Sbjct: 236 EALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTL 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L V + A + E + ++G + + T+++L + Y GL ++ + ++ + +
Sbjct: 296 IHGLCKVGSMEEALDLFERVTKEG-MELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQG 354
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL Y LI + ++G++ E ++ + + ++Y ++ L +
Sbjct: 355 VEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEID 414
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E + D+ +++I Y K G +E A ++
Sbjct: 415 NLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQV 451
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
NSL+ Y K G + + + ++ S ++P + TY M AL+ +++ + +EM
Sbjct: 539 NSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVA 598
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
R+ A+ T+S + + F++A LK+++++ + D Y LI + ++ N+
Sbjct: 599 K-RIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQ 657
Query: 145 EVYRI 149
+ I
Sbjct: 658 MAFHI 662
>gi|449457827|ref|XP_004146649.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 204
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
N + A+ + LY + G E++RIW + N +++MI L L D+ GA
Sbjct: 11 NVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLFVLDDIKGA 68
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER---ARRRGADPNAKTWEIF 238
E+ +KEWE+ +YD+R+ N+++ AY + G +E AE L RR+ + ++W
Sbjct: 69 ERIYKEWETQKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFS---VESWCYL 125
Query: 239 SDYYLRNGDMKLAVDCLEKA 258
+ YL+ + AV+ L+ A
Sbjct: 126 ASGYLQKDQLPQAVETLKLA 145
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +K+E LL +K+ GF+ FN + LYA+ G ++I I K I +
Sbjct: 1 MLKKSEGLLANVKKK--GFA---FNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISM 55
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ +L ++DI GAER+ +E + +++ D + L Y AGL EKAE L E+
Sbjct: 56 I--TSLFVLDDIKGAERIYKEWETQ-KLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVI 112
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ ++ +L + Y Q L + + P+ N + L +D+
Sbjct: 113 VRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAFLDGKQDVEE 172
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEG 211
EK ++ R + ++GA E
Sbjct: 173 TEKVVNLLREKDDSHPARAHDYIVGAIMTES 203
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 131/331 (39%), Gaps = 10/331 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NSL++ K G EK I+Q+M P++ TYN + AL N+I A + +
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D TF+ L + + A +E++N+ D Y LI L
Sbjct: 361 SKG-LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRL 419
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + + + + + Y +I L + + AE+ F + E + N +
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I K R+E A +L ++ G P+ T+ Y+ R GD++ A D ++ G
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG- 538
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
P T T + + VD A L ++ L + P+I+ R
Sbjct: 539 -----CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593
Query: 324 TSPVM-LRRLKMEKVEVSEA--SKKLLEAIC 351
T M L R MEK + +A K + +C
Sbjct: 594 TKEGMRLFREMMEKSDPPDALTHKIVFRGLC 624
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 137/328 (41%), Gaps = 13/328 (3%)
Query: 18 GFS--SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
GFS + FNSL+ + + G+ I+ M PD YTYN + + + + A
Sbjct: 258 GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKA 317
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
++++M + + T++ L S + E A + L ++ D+ + LI
Sbjct: 318 IEILQQMILR-ECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQ 376
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCAT 194
+ N ++ ++ +Y +I L + L A KE E SGCA
Sbjct: 377 GLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCAR 436
Query: 195 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 254
+ V N +I K R+E+AEE+ ++ G ++ T+ D +N ++ A
Sbjct: 437 NAV-VYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQL 495
Query: 255 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 314
+++ I G P T + + +F + D++ A ++ + + + + L
Sbjct: 496 MDQMIMEG------LKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTL 549
Query: 315 IRTYAAAGR--TSPVMLRRLKMEKVEVS 340
I AGR + +LR ++M+ + ++
Sbjct: 550 IGGLCRAGRVDVASKLLRSVQMKGIVLT 577
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 106/245 (43%), Gaps = 13/245 (5%)
Query: 23 PFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE- 81
P +L+ ++ + I +++++K+S +P++ T+ +++ ++I +++E
Sbjct: 57 PNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENE 116
Query: 82 --MKRDGRVAADWTTFSNLA-SIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
K D T F N+A + VE + E ++ N D+S + LI
Sbjct: 117 LGFKPD-------TNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALC 169
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDI 197
+ L + + I++ ++Q + DL GA K K+ GC ++
Sbjct: 170 KAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNV 229
Query: 198 RVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
V V++ + KEGR+E A G P+ T+ + + R G++ A+D ++
Sbjct: 230 SV-KVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288
Query: 258 AIDTG 262
I+ G
Sbjct: 289 MIEKG 293
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE + ++M+ L + SS+ +N+L+ K E+ ++ +M + PD +TYN
Sbjct: 455 EDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSL 514
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V DI A +++ M +G D T+ L AG + A + L+ ++ +
Sbjct: 515 LTYFCRVGDIEKAGDIVQTMASNG-CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 573
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
AY +I E R++R +
Sbjct: 574 IVLTPHAYNPVIQALFMRKRTKEGMRLFREM 604
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 97/272 (35%), Gaps = 38/272 (13%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
E L KM + FN L+ K +++EM + PD T+ M+
Sbjct: 142 VEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQ 201
Query: 65 ALAAVNDISGAERVIEEM-------------------KRDGRV---------------AA 90
D++GA ++ ++M ++GRV +
Sbjct: 202 GFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSP 261
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
D TF++L + + G A + + + D+ Y LI+ + G + I
Sbjct: 262 DQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEIL 321
Query: 151 RS--LRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYA 208
+ LR PNT ++Y +I L ++ A + S D+ N +I
Sbjct: 322 QQMILRECSPNT--VTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLC 379
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ A E+ E + +G P+ T+ I D
Sbjct: 380 LSKNQDIAMEMFEEMKNKGCKPDEFTYSILID 411
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 118/289 (40%), Gaps = 12/289 (4%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE A LL++M + + NSLM Y G +K+ I M + + PD Y+Y++
Sbjct: 126 TELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSI 185
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ V I A + +EM G V + T++ L +A A+ +++
Sbjct: 186 FINGYCKVEKIDEAMELFDEMSHRG-VVPNAVTYNTLIKALCQALRPRDAQVLFRKMCAC 244
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
D+ AY L+ + + GNL E+ +++ + RL P+ + Y +I + + +
Sbjct: 245 GLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDL--VVYTIIINGMCRSRKVK 302
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A++ D+ ++ +EG + A L + G P + ++ +
Sbjct: 303 DAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLL 362
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
L++ D V + + D G + RTF++ F D
Sbjct: 363 QGCLQHNDTSTVVQLIHEMADRG-------FYADAVTRTFLKDFLPGND 404
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 9/278 (3%)
Query: 13 KELNLGFSS--MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
K L GF + F +L+ + G E +++EM +PD T N MR +
Sbjct: 100 KTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQG 159
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAY 130
I ++ M G + D ++S + Y + ++A E+ +R + Y
Sbjct: 160 KIDKVRKIFHLMVSKG-LKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTY 218
Query: 131 QFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
LI Q + ++R + + ++Y ++ +L F+E +
Sbjct: 219 NTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQR 278
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
D+ V ++I + ++++A+E+ R G P+ T+ D R G +
Sbjct: 279 RLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIE 338
Query: 251 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKD 288
A+ K + G +P S + ++ Q D
Sbjct: 339 ALRLFRKMEEDG------CMPGSCSYNVLLQGCLQHND 370
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+KM++ + + +++L+ L K K +I +K S PD YN +
Sbjct: 39 LQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGK 98
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V + T++S L ++YVE F +A E+ DL+
Sbjct: 99 AKLFREARSLISEMKTAG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLT 157
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ G E +++ +R +SY +++V + + A F+
Sbjct: 158 TCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLM 217
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N M+ Y K E A L + + RG +PN+ T+ + + G +
Sbjct: 218 QRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKL 277
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 278 DRAAMLFQKLRSSG 291
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + A +++M++D +V D +SNL +
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-QVPGDLVLYSNLIEL 60
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 159
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 61 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPN 120
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
T SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 121 TT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
R+ G +PN ++ Y GD +L
Sbjct: 179 FWGMRKMGIEPNVVSYNTLLRVY---GDAEL 206
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 17/239 (7%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 209 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 268
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 269 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 327
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYL-NMIQVLVNLKDLPGA 181
RD + I + G + E ++R + NI+ MI +L K
Sbjct: 328 IPRDTA-----IHILAGAGRIEEATYVFRQ-AIDAGEVKNIAVFERMIHLLSKYKKYANV 381
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + D V V++ AY K + A ++ + G +FSD
Sbjct: 382 VEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGC--------VFSD 432
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 243 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 302
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 303 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 357
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
++++ ++ +I L Y + N+ EV+ R L FP++ N+I V++N L
Sbjct: 358 EVKNIAVFERMIHLLSKYKKYANVVEVFDKMRGLGY-FPDS------NVIAVVLNAYGKL 410
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
++ A + E E GC D
Sbjct: 411 QEFDKANDVYMEMQEVGCVFSD 432
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 137/328 (41%), Gaps = 19/328 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A LL+ M + N + + +++ K E+ ++Q+M+ + P+ YTYN
Sbjct: 340 EDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNAL 399
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L AV A ++ M++ G V + T++ L + ++A+ E R
Sbjct: 400 IQGLCAVRRPEEALELVTLMEQGG-VPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARG 458
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y L+ Y + L E I + + +++Y +IQ LV LP A
Sbjct: 459 LKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDAL 518
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ E E+ + N++ A+ G ++A R + RG +A SDYY
Sbjct: 519 RMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSA------SDYY 572
Query: 243 L------RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
L G+M+ A L + I+ G + P+ T T ++ F ++ +D A+ L
Sbjct: 573 LAIHCLSTAGEMEEAQALLYEMINKG------YSPNLTTYNTMIKGFCRQGRLDDADAML 626
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRT 324
+ + + LI+ + GRT
Sbjct: 627 NFMIENGIGPDTGSYNILIKEFHNQGRT 654
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 108/297 (36%), Gaps = 36/297 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M E+A +L+KM+E + +N+L+ PE+ ++ M+ + P+ YTY
Sbjct: 373 MIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYT 432
Query: 61 VWMRALAAV-----------------------------NDISGAERVIEEMK-----RDG 86
+ L + N R+IE M
Sbjct: 433 ILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQN 492
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
D T++ L V+ A R E+EN+ + L + GN +
Sbjct: 493 DCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDA 552
Query: 147 YRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+R ++ F +A+ YL I L ++ A+ E + + ++ N MI
Sbjct: 553 SIFYRRMKDRGFAYSASDYYL-AIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIK 611
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ ++GRL++A+ + G P+ ++ I + G + A A++ G
Sbjct: 612 GFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERG 668
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 5/212 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ Y + + I++EM + PD TY ++ L N + A R+ +EM+
Sbjct: 466 YNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEME 525
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G ++ T + LA G + A + +++R S Y I G +
Sbjct: 526 NKG-YDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEM 584
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E + + + PN +Y MI+ L A+ D N
Sbjct: 585 EEAQALLYEMINKGYSPNLT--TYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYN 642
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAK 233
++I + +GR ++A++L A RG N K
Sbjct: 643 ILIKEFHNQGRTQDADQLYATALERGVVLNPK 674
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S MPD YN
Sbjct: 24 LFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V + ++S L ++YVE F +A E+
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAG-VTPNTASYSTLLTMYVENKKFLEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ +R +SY +++V + +
Sbjct: 143 IKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PN+ T+
Sbjct: 203 AIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAMLFQKLRSSG 284
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 168
A L+ DL AY +I ++G+ E + +R A PNTA SY +
Sbjct: 63 AISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTA--SYSTL 120
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 229 DPNAKTWEIFSDYYLRNGDMKL 250
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P+S TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSG-VDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD++ I + G + E ++R A + MI + K
Sbjct: 321 IPRDIA-----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V +++ AY K + A ++
Sbjct: 376 EVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDV 412
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D I AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILAGAGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + GN+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS------NVIALILNAYGKL 403
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
+ A + E E GC D
Sbjct: 404 HEFDKANDVYMEMQEVGCVFSD 425
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 107/253 (42%), Gaps = 1/253 (0%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
++M E + + +N L+ G + +++EM + PD +TYN+ +
Sbjct: 168 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 227
Query: 70 NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSA 129
++ A + E M R G V A T+++L + G ++ ++ E R DL
Sbjct: 228 GNVKKALEIFENMSRRG-VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 286
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
Y LI + +GN+ + I + +++Y +++ L L + A K E
Sbjct: 287 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 346
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
D+ N +I Y+ +G +++A ++ +G +P T+ +NG
Sbjct: 347 KRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 406
Query: 250 LAVDCLEKAIDTG 262
A + +++ ++ G
Sbjct: 407 DAENMVKEMVENG 419
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 2/218 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA + E M + + + + SL+ +K G ++ + E I PD YN
Sbjct: 231 KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 290
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + + +I A ++ EM++ R+A D T++ L G ++A + + E+ R
Sbjct: 291 INSHSTSGNIDRAFEIMGEMEKK-RIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 349
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL Y LI+ Y G++ + RI + N ++Y +IQ L AE
Sbjct: 350 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 409
Query: 183 KCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
KE E+G D +++ G ++ R + E L
Sbjct: 410 NMVKEMVENGITPDDSTYISLIEGLTTEDERAIDDERL 447
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 128/324 (39%), Gaps = 19/324 (5%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTYNVW 62
+A LL +M N ++ +N+++ + G + I++EM+ I P+ YTY
Sbjct: 59 RALELLRQMPRPN----AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTV 114
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V + A +V +EM G V + ++ L Y + G + A + R
Sbjct: 115 ISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERG 174
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
++ Y L+ G +E Y + + +Y +L+N G
Sbjct: 175 VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY----NILINGHCKEGNV 230
Query: 183 KCFKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K E + +R T V +I A +K+G+++ ++L + A RRG P+ +
Sbjct: 231 KKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 290
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEI 298
+ + +G++ A + + G + + P T T MR VD A ++
Sbjct: 291 INSHSTSGNIDRAFEIM------GEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 344
Query: 299 LKKAVDDLGVEVFEPLIRTYAAAG 322
+ K + + LI Y+ G
Sbjct: 345 MTKRGIQPDLVTYNTLISGYSMKG 368
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 97/234 (41%), Gaps = 9/234 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A AL M L L + FN ++ G P + ++++M P++ TYN +
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ + A ++ EM+ G +A + T+ + S + + G ++A + E+ +
Sbjct: 81 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140
Query: 125 R-DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE- 182
+ + Y LI Y G L ++R + ++ N++ V D G E
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTAL-LYRDRMVERGVAMTVATYNLL-VHALFMDGRGTEA 198
Query: 183 -KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ +E D+ N++I + KEG ++ A E+ E RRG T+
Sbjct: 199 YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 252
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 133/321 (41%), Gaps = 13/321 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEM- 82
FN+L+ K GH + I+ M PD YTYN + L + ++ A +++M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357
Query: 83 KRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGN 142
RD + + T++ L S + E+A + L ++ D+ + LI T N
Sbjct: 358 TRD--CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 143 LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE-SGCATYDIRVTN 201
++ +R +Y +I L + L A K+ E SGCA + N
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR-SVITYN 474
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT 261
+I + K ++ AEE+ + G N+ T+ D ++ ++ A +++ I
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIME 534
Query: 262 GRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAA 321
G+ P T + + HF + D+ A ++ + + + + LI A
Sbjct: 535 GQK------PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 322 GR--TSPVMLRRLKMEKVEVS 340
GR + +LR ++M+ + ++
Sbjct: 589 GRVEVASKLLRSIQMKGIALT 609
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++M+ S + +N+L+ + K + I EM+ + +S TYN
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A +++++M +G+ D T+++L + + G +KA ++ + +
Sbjct: 512 IDGLCKSRRVEDASQLMDQMIMEGQ-KPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y LI+ + G + ++ RS+++ +Y +IQ L + A
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI 630
Query: 183 KCFKE 187
F+E
Sbjct: 631 NLFRE 635
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 125/311 (40%), Gaps = 9/311 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKAS-SIMPDSYTYNVWMRAL 66
+LE MK + PF L+ YA+ ++I ++ M + PD++ YN + L
Sbjct: 105 ILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLL 164
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
N++ E +M G + D +TF+ L A A L+++ + D
Sbjct: 165 VDGNNLKLVEIAHAKMSVWG-IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ ++ Y + G+L RI + + +N+S ++ + A +
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 187 EWESGCATYDIRVT-NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
E + + + T N ++ K G +++A E+ + + G DP+ T+ +
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 246 GDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDD 305
G++K AV+ L++ I P++ T T + +E V+ A +L
Sbjct: 344 GEVKEAVEFLDQMITR------DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
Query: 306 LGVEVFEPLIR 316
V F LI+
Sbjct: 398 PDVCTFNSLIQ 408
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE + ++M+ + +S+ +N+L+ K+ E ++ +M PD +TYN +
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
DI A +++ M +G D T+ L S +AG E A + L+ ++ +
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNG-CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
AY +I + +E ++R +
Sbjct: 607 ALTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 94/252 (37%), Gaps = 4/252 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+LE M L F ++M Y + G + I ++M + + NV +
Sbjct: 211 MLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ A I+EM D TF+ L + +AG + A + + D+
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
Y +I+ + G + E + R PNT ++Y +I L + A +
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNT--VTYNTLISTLCKENQVEEATELA 388
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+ S D+ N +I A EL E R +G +P+ T+ + D
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 246 GDMKLAVDCLEK 257
G + A++ L++
Sbjct: 449 GKLDEALNMLKQ 460
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 7/194 (3%)
Query: 105 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 164
+G F+ + L++++N S + LI Y Q E+ + + F +
Sbjct: 96 SGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTH 155
Query: 165 YLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
+ N M+ +LV+ +L E + D+ NV+I A + +L A + E
Sbjct: 156 FYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
G P+ KT+ Y+ GD+ A+ E+ ++ G W S+ ++ + F
Sbjct: 216 PSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEF----GCSW--SNVSVNVIVHGF 269
Query: 284 EQEKDVDGAEGFLE 297
+E V+ A F++
Sbjct: 270 CKEGRVEDALNFIQ 283
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 8/296 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA LE+M+ + + + + +N L+ Y E +I EM PD +Y
Sbjct: 223 EKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTV 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L I ++E+M +D ++ D T++ L + + G ++A L+E E R
Sbjct: 283 MGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERG 342
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y ++ + G + I + + ++Y ++ L + + A+
Sbjct: 343 FQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAK 402
Query: 183 KCFKE-WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
K ++ ++ GC + T ++ G LE A E+ + PNA T+ +
Sbjct: 403 KMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLE-AREMMNTSEEDWWTPNAITYSVVMHG 461
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
R G + A D + + + G + P+ I ++ E+ ++ A+ F+E
Sbjct: 462 LRREGKLSEACDVVREMLTKG------FFPTPVEINLLIKSLCLEQKMNEAKKFME 511
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 135/323 (41%), Gaps = 23/323 (7%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHP-EKIPAIIQEMKASSIMPDSYTYNV 61
++A + EKMKE L + + +N ++ +Y K G I ++ EM++ + D +T
Sbjct: 254 KRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTT 313
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A + A R +++K +G T++++ ++ +AG++ +A LKE+E+
Sbjct: 314 VISACGREGILDEARRFFDDLKLNGYKPGT-ATYNSMLQVFGKAGVYTEALNILKEMEDN 372
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
N D Y L+ Y + G E + ++ + PN I+Y +I D
Sbjct: 373 NCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNA--ITYTTVINAYGKAGDAD 430
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + F + E GC NV++ K R E+ ++ + G P+ TW
Sbjct: 431 KALEVFGQMKELGCVPNVCTYNNVLV-LLGKRSRSEDMIKILCDMKLNGCPPDRITWNTM 489
Query: 239 SDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQ-EKDVDGAEGFLE 297
G K L + + G + P ET T + + + +VD A+ + E
Sbjct: 490 LAVCGEKGKQKFVSQVLREMKNCG------FEPDKETFNTLISAYGRCGSEVDVAKMYGE 543
Query: 298 ILKKAVDDLGVEVFEPLIRTYAA 320
++ F P I TY A
Sbjct: 544 MVAAG--------FTPCITTYNA 558
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/296 (18%), Positives = 127/296 (42%), Gaps = 10/296 (3%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ A+ G+ + +++ +M+ P+ +Y++ + + ++ G E+V E+
Sbjct: 556 YNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEI- 614
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
DG V W L + + ERA +L+N D+ +++++ + L
Sbjct: 615 YDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKL 674
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+ + + + ++ ++Y ++I + + D AE+ K+ ++ + D+ N +
Sbjct: 675 EKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTV 734
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I + K+G ++ A + G P T+ F Y NG A + + I+ G
Sbjct: 735 IKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHG- 793
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK---AVDDLGVEVFEPLIR 316
+P+ T + + + + K A F+ +K+ + DD ++ IR
Sbjct: 794 -----CMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDISFDDQSLKKLASCIR 844
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 120/299 (40%), Gaps = 44/299 (14%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA + +MKEL + +N+++ L K E + I+ +MK + PD T+N
Sbjct: 430 DKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTM 489
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY----------------VEAG 106
+ +V+ EMK G D TF+ L S Y V AG
Sbjct: 490 LAVCGEKGKQKFVSQVLREMKNCG-FEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAG 548
Query: 107 L-------------------FEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
++ AE + ++ + + ++Y L+ Y + GN+ +
Sbjct: 549 FTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLE 608
Query: 148 RIWRSLR--LAFPNTANISYLNMIQVLVNLK--DLPGAEKCFKEWESGCATYDIRVTNVM 203
++ + FP+ + L VL N K L G E+ F + ++ D+ V N M
Sbjct: 609 KVEMEIYDGHVFPSWMLLRTL----VLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINSM 664
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ + + +LE A E+ + G PN T+ D Y R GD A + L+ ++G
Sbjct: 665 LSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 105/242 (43%), Gaps = 1/242 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L++M++ N ++ +N L+ Y + G ++ A+I M + +MP++ TY + A
Sbjct: 365 ILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYG 424
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
D A V +MK G V + T++N+ + + E + L +++ D
Sbjct: 425 KAGDADKALEVFGQMKELGCV-PNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDR 483
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ ++ + G+ G V ++ R ++ ++ +I K + E
Sbjct: 484 ITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGE 543
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ T I N ++ A A+ G + AE + R++G PN ++ + Y + G+
Sbjct: 544 MVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGN 603
Query: 248 MK 249
++
Sbjct: 604 VR 605
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA +L+ + L + + +NSL+ LYA+ G K ++++++ S I PD +YN
Sbjct: 675 EKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTV 734
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ + A R++ EM +G V TF+ S Y GLF +A+ ++ +
Sbjct: 735 IKGFCKKGLVQEAIRILSEMTANG-VQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHG 793
Query: 123 AHRDLSAYQFLITLY 137
+ Y+ +I Y
Sbjct: 794 CMPNELTYKIVIDGY 808
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 88/237 (37%), Gaps = 35/237 (14%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
+++ YA+TG ++ I ++MK + + P TYNV +
Sbjct: 242 TVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVY------------------- 282
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G++ W+ L L E+ ++ D +I+ G+ G L E
Sbjct: 283 GKMGRAWSMILEL----------------LDEMRSKGLEFDEFTCTTVISACGREGILDE 326
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
R + L+L +Y +M+QV A KE E D N ++
Sbjct: 327 ARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVA 386
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
AY + G + + + +G PNA T+ + Y + GD A++ + + G
Sbjct: 387 AYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELG 443
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 194 TYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVD 253
+ D++ ++ AYA+ G+ + A E+ E+ + G DP T+ + D Y G M A
Sbjct: 234 SLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVY---GKMGRAWS 290
Query: 254 CLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEP 313
+ + +D R G ++ T T + +E +D A F + LK G +
Sbjct: 291 MILELLDEMRSKGLEF--DEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNS 348
Query: 314 LIRTYAAAG 322
+++ + AG
Sbjct: 349 MLQVFGKAG 357
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 105/240 (43%), Gaps = 1/240 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A + ++M L G +N+ + K G+ ++ +M+A++ P+ TY+
Sbjct: 332 EDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTL 391
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M + + A ++ E+MK R+ D ++ L +IYV+ G +++ +E+E
Sbjct: 392 MDGFSKLEKYDEALKLREKMK-SLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLG 450
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+D Y LI YG+ G L V + + +R + ++Y +I + A
Sbjct: 451 IEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAF 510
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ +++ D+ + + I AK G +E A L + + G PN T+ D +
Sbjct: 511 NVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAF 570
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L EKMK L + + +N+L+ +Y KTG ++I + +EM+ I D+ TYN
Sbjct: 402 DEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSL 461
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + ++++M+ G VA T+S L IY +AG+ A + +
Sbjct: 462 INGYGKQGRLDMVAFLVQDMRAQG-VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESG 520
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIW-RSLRLAF-PNTANISYLNMIQVLVNLKDLPG 180
D+ + I + G + + +++ PN ++Y +I D G
Sbjct: 521 LKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNV--VTYNTII-------DAFG 571
Query: 181 AEKCFKEWESGCATYDI---------RVTNVMI--GAYAKEGRLENAE------ELKERA 223
K F E +S I RVTN +I G A + R+ ++ EL ++
Sbjct: 572 KSKIFTEEDSDIGDMGIVGVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELFQKM 631
Query: 224 RRRGADPNAKTWE 236
++G PN T+
Sbjct: 632 VQQGVRPNVVTFS 644
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 8/250 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIP-AIIQEMKASSIMPDSYTY 59
+ +A +LE MK L +++ +N+++ K G + ++M + PD T+
Sbjct: 259 LATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTF 318
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N + A + + A V +EM G D T++ + G A + + ++E
Sbjct: 319 NSLLAACSRAGHLEDARTVFDEMIHLGS-GRDIYTYNTFVDAICKCGNMGLALQVVLDME 377
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRI---WRSLRLAFPNTANISYLNMIQVLVNLK 176
NA ++ Y L+ + + E ++ +SLR+ + Y ++ + V
Sbjct: 378 ANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDR---VCYNTLLAIYVKTG 434
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+E E D N +I Y K+GRL+ L + R +G P+ T+
Sbjct: 435 KYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYS 494
Query: 237 IFSDYYLRNG 246
D Y + G
Sbjct: 495 TLIDIYSKAG 504
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 11/299 (3%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L+ + K PEK + Q M + D +Y + A + + A ++EEMK
Sbjct: 163 LIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEMKNTP 222
Query: 87 RVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
D T+S L ++ F+K + L ++ NR + Y LI YG+ SE+
Sbjct: 223 GCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARKFSEM 282
Query: 147 YRIWRSL---RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
I + R P+ ++ + ++ N+ + EKC++++++ +++ N++
Sbjct: 283 ESILVEMLADRYCQPDVWTMN--STLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFNIL 340
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ +Y K + + E ++ T+ I D + + GD+K +E R
Sbjct: 341 LDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGKAGDLKQ----MEYLFRLMR 396
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAG 322
+ K PS T+ + +R + + + G L ++ + L F L+ YA G
Sbjct: 397 SERIK--PSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVFFNCLVDAYARLG 453
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 108/245 (44%), Gaps = 2/245 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS-IMPDSYTYNV 61
+K ++LL M + +++ +N+L+ Y K ++ +I+ EM A PD +T N
Sbjct: 245 DKIQSLLSDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNS 304
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+RA + I E+ E+ + G + + TF+ L Y +A ++K ++ ++
Sbjct: 305 TLRAFGNIGQIETMEKCYEKFQNAG-IQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKY 363
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ + + +I +G+ G+L ++ ++R +R + ++ ++++
Sbjct: 364 HYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKI 423
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ E+ D N ++ AYA+ G L + + E ++ G P+ T+
Sbjct: 424 SGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKT 483
Query: 242 YLRNG 246
Y G
Sbjct: 484 YTYKG 488
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++ E L M+ + S + SL+ YA+ G PEKI +++ ++ S ++ D+ +N
Sbjct: 386 KQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVFFNCL 445
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
+ A A + ++ + V+E MK++G D T+ + Y G+ A + L+EL
Sbjct: 446 VDAYARLGCLAEMKGVLEMMKQNG-CKPDIVTYRTMIKTYTYKGMDSHA-KELREL 499
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + +L S + FN+LM Y K G ++ + M+AS + PD YTY+V +
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM +G V + TF+ L + + G + A K++ +++
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + I+Y +I DL E
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDL---ETA 330
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
F E+ +IR+ +V +I +EGR +AE++ G P T+ + +
Sbjct: 331 F-EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389
Query: 241 YYLRNGDM 248
+ + GD+
Sbjct: 390 EFCKKGDV 397
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M + L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A+ +I+EM G + D T++ L + G E A K + N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKG-LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D AY LI+ Q G + ++ R +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/199 (18%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M + +I A+ V + + + + +F+ L + Y++ G ++ R
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
++ D+ Y LI + + + ++ + PN +++ +I
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ A++L + +G P+ T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GD++ A +
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 110/295 (37%), Gaps = 36/295 (12%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA +L M + + M +NS++ Y +G P++ +++M++ + PD TY++
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M L A ++ + M + G + + TT+ L Y G + L +
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 366
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF--PNT-------------------- 160
H D + LI Y G + + ++ +R PN
Sbjct: 367 IHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Query: 161 -------------ANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
NI Y ++I L AE+ E + N +I ++
Sbjct: 427 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 486
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
KEGR+ +E+L E R G PN T+ + Y G M A+ L + G
Sbjct: 487 CKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 6/269 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMP----FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSY 57
+++A LL M + + G S P + +++ + K G +K + EM I+PD
Sbjct: 174 SQEALELLHMMAD-DRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVV 232
Query: 58 TYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE 117
TYN + AL + A V+ M ++G V D T++++ Y +G ++A LK+
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKD 177
+ + D+ Y L+ + G E +I+ S+ +Y ++Q
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
L D V +++I AYA +G+++ A + + R++G +PNA T+
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
++G ++ A+ E+ ID G G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 4/255 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
++A + KM++ L +++ + +++ + K+G E ++M + P + YN
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L N AE +I EM G + + F+++ + + G ++E+ + +
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRG-ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
++ Y LI Y G + E ++ + ++Y +I + + A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
FKE ES + DI N+++ + R A+EL R G T+ I
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 242 YLRNGDMKLAVDCLE 256
+N KL D L+
Sbjct: 626 LCKN---KLTDDALQ 637
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 102/244 (41%), Gaps = 1/244 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE L+ +M + + +++ FNS++ + K G + + + M + P+ TYN
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ + A +++ M G + + T+S L + Y + E A KE+E+
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y ++ QT + ++ + + +Y ++ L K A
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F+ + R N+MI A K GR + A++L G PN T+ + ++
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696
Query: 243 LRNG 246
+ G
Sbjct: 697 IGQG 700
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 97/242 (40%), Gaps = 9/242 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL M + L +++ +++L+ Y K E + +EM++S + PD TYN+
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L + A+ + + G + +T++ + + L + A + + L +
Sbjct: 588 LQGLFQTRRTAAAKELYVRITESG-TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI----SYLNMIQVLVNLKDL 178
+ + +I + G E + L +AF + + +Y M + ++ L
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEA----KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
++ F E T D + N ++ + G + A + A T +F
Sbjct: 703 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLF 762
Query: 239 SD 240
D
Sbjct: 763 ID 764
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 9/248 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + +L S + FN+LM Y K G ++ + M+AS + PD YTY+V +
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM +G V + TF+ L + + G + A K++ +++
Sbjct: 215 GLCKESKMDDANELFDEMLDNGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + I+Y +I DL A
Sbjct: 274 ADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA--- 330
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E+ +IR+ +V +I +EGR +AE++ G P T+ + +
Sbjct: 331 -FEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN 389
Query: 241 YYLRNGDM 248
+ + GD+
Sbjct: 390 EFCKKGDV 397
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M + L + + F +L+ + K G + I ++M + S+ D TYN
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A+ +I+EM G + D T++ L + G E A K + N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKG-LKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D AY LI+ Q G + ++ R +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/199 (18%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M + +I A+ V + + + + +F+ L + Y++ G ++ R
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
++ D+ Y LI + + + ++ + PN +++ +I
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ A++L + +G P+ T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVD 253
+ D + GD++ A +
Sbjct: 314 YTTLIDGNCKEGDLETAFE 332
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 113/263 (42%), Gaps = 2/263 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+AE L +MK + + FN LM Y++ PE + ++ EM+ + + P++ +Y
Sbjct: 390 VEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTC 449
Query: 62 WMRALAAVNDISG-AERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A ++S A +MK+DG + +++ L Y +G EKA A + ++
Sbjct: 450 LISAYGKQKNMSDMAADAFLKMKKDG-IKPTSHSYTALIHAYSVSGWHEKAYAAFENMQR 508
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ Y L+ + + G+ + +IW+ +R +++ ++
Sbjct: 509 EGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMRRYKVEGTRVTFNTLVDGFAKHGHYKE 568
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A ++ + + N+++ AYA+ G+ EL E P++ T+
Sbjct: 569 ARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVTYSTMIY 628
Query: 241 YYLRNGDMKLAVDCLEKAIDTGR 263
+LR D A ++ + +G+
Sbjct: 629 AFLRVRDFSQAFFYHQEMVKSGQ 651
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A ++ K + L + M +N LM YA+ G K+P +++EM A ++ PDS TY+
Sbjct: 567 KEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVTYSTM 626
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ A V D S A +EM + G+V D+ ++ L +I
Sbjct: 627 IYAFLRVRDFSQAFFYHQEMVKSGQV-IDFNSYQKLRAI 664
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 128/328 (39%), Gaps = 28/328 (8%)
Query: 27 LMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDG 86
L L K +K+ + + + D + YN + L + A +V E M+ D
Sbjct: 239 LFPLLGKARMGDKLMLLFTNLPSGREFRDVHVYNAAISGLLSSGRCEDAWKVYESMEADN 298
Query: 87 RVAADWTTFSNLASIYVEAGLFEK-AERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
V D T S + + + G K A + +++ + LI + G +SE
Sbjct: 299 -VLPDHVTCSIMVIVMRKLGHSAKDAWQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSE 357
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
I L ++ I Y ++ + AE F E ++ + N+++
Sbjct: 358 ALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMY 417
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK-LAVDCLEKAIDTGRG 264
AY+++ + E E+L + G PNAK++ Y + +M +A D K +
Sbjct: 418 AYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKM----KK 473
Query: 265 DGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA---- 320
DG K P+S + + + G+ E A +++ E +P I TY A
Sbjct: 474 DGIK--PTSHSYTALIHAY-------SVSGWHEKAYAAFENMQREGIKPSIETYTALLDA 524
Query: 321 ---AGRTSPVM-----LRRLKMEKVEVS 340
AG T +M +RR K+E V+
Sbjct: 525 FRRAGDTQTLMKIWKLMRRYKVEGTRVT 552
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+L+ +AK GH ++ +I + + P TYN+ M A A S ++EEM
Sbjct: 553 FNTLVDGFAKHGHYKEARDVISKFANVGLHPTVMTYNMLMNAYARGGQHSKLPELLEEMA 612
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFL 133
+ D T+S + ++ F +A +E+ D ++YQ L
Sbjct: 613 AHN-LKPDSVTYSTMIYAFLRVRDFSQAFFYHQEMVKSGQVIDFNSYQKL 661
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 131/331 (39%), Gaps = 21/331 (6%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTY 59
M KA A+ ++K ++ +NS++ + G EK+ + EM PD+ TY
Sbjct: 170 MISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTY 229
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGR--VAADWTTFS----NLASIYVEAGLFEKAER 113
+ + A + A ++ EMK +G A +T L +++ GLFE
Sbjct: 230 SALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFE---- 285
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
E+ ++ D+ Y LI G+ G L E Y + +R + NMI L
Sbjct: 286 ---EMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLG 342
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA-YAKEGRLENAEELKERARRRGADPNA 232
L A K F+E E+ + N +I A + + R+ ER + G P+
Sbjct: 343 KAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSP 402
Query: 233 KTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
T+ I D + + + A+ LE+ + G + P + + + K D A
Sbjct: 403 FTYSILIDGFCKTNRTEKAMMLLEEMDEKG------FPPCPAAYCSLIDALGKAKRYDLA 456
Query: 293 EGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
+ LK+ V+ +I+ AGR
Sbjct: 457 NELFQELKENCGSSSARVYAVMIKHLGKAGR 487
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 125/332 (37%), Gaps = 45/332 (13%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL +MK+ + ++ + LM L K + + +EM+ PD +TY +R L
Sbjct: 248 LLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLG 307
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ A EM+R+G D +N+ + +AG + A + +E+E +
Sbjct: 308 KAGRLDEAYNFFHEMRREG-CRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSV 366
Query: 128 SAYQFLI-TLYGQTGNLSEVY-----------------------------RIWRSLRL-- 155
Y +I L+ +SE+ R +++ L
Sbjct: 367 VTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLE 426
Query: 156 -----AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
FP +Y ++I L K A + F+E + C + RV VMI K
Sbjct: 427 EMDEKGFP-PCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKA 485
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
GRL++A +L + R G PN + R G + A+ + + D G +
Sbjct: 486 GRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHG------CI 539
Query: 271 PSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
P + + + D A G L +K++
Sbjct: 540 PDINSYNIILNALAKTGGPDRAMGMLCNMKQS 571
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L + +N+LM+ A+ G ++ ++ M+ +PD +YN+
Sbjct: 489 DDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNII 548
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ ALA A ++ MK+ + D +++ + AG+FE+A + +KE+
Sbjct: 549 LNALAKTGGPDRAMGMLCNMKQSA-IKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIG 607
Query: 123 AHRDLSAYQFLITLYGQT 140
DL Y ++ G+
Sbjct: 608 FDYDLITYSSILEAIGKV 625
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 5/210 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
TEKA LLE+M E GF P + SL+ K + + QE+K + + Y
Sbjct: 418 TEKAMMLLEEMDE--KGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVY 475
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
V ++ L + A + +EM R G + ++ L S AG+ ++A ++ ++
Sbjct: 476 AVMIKHLGKAGRLDDAVDLFDEMNRLG-CTPNVYAYNALMSGLARAGMLDEALTTMRRMQ 534
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ D+++Y ++ +TG + +++ + +SY ++ L +
Sbjct: 535 DHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFE 594
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
A K KE + YD+ + ++ A K
Sbjct: 595 EAAKLMKEMNAIGFDYDLITYSSILEAIGK 624
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A + +M++ +N ++ AKTG P++ ++ MK S+I PD+ +YN
Sbjct: 522 MLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYN 581
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 98
+ AL+ A ++++EM G D T+S++
Sbjct: 582 TVLGALSHAGMFEEAAKLMKEMNAIG-FDYDLITYSSI 618
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 130/335 (38%), Gaps = 12/335 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E + +LEK EL++ +NSL++ K G ++ I+ M + P++ TYN
Sbjct: 323 EMMDFMLEKGFELDV----YTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTL 378
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L N + A + + G V D TF++L E A +E++ +
Sbjct: 379 IGTLCKENHVEAATELARVLTSKG-VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI L E + + + L+ + Y +I L + AE
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F + E + N +I K R+E A +L ++ G P+ T+ Y+
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYF 557
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
+ GD+K A D ++ G P T T + + VD A L ++
Sbjct: 558 CQQGDIKRAADIVQNMTLNG------CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMK 611
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPVM-LRRLKMEK 336
L + + P+I+ RT M L R MEK
Sbjct: 612 GMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEK 646
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 86/213 (40%), Gaps = 5/213 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N ++L K + + + +M A ++ PD T+N+ +RAL + + A ++E+M
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D TF+ L ++E E A R + + + L+ + G +
Sbjct: 227 NYG-LRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRI 285
Query: 144 SEVYRIWRSLRLAFPNTANISYL-NMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNV 202
E R P+ + L N + ++K G E E G D+ N
Sbjct: 286 EEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQ--GLEMMDFMLEKG-FELDVYTYNS 342
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+I K G ++ A E+ R +PN T+
Sbjct: 343 LISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 44/260 (16%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGH--PEKIPAIIQEMKASSIMPDSYTYNVWMR 64
LL +M + F + YA + H E P + + ++ PD+ YNV +
Sbjct: 113 TLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALS 172
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L N + E + +M D V D +TF+ L +A A L+++ N
Sbjct: 173 LLVKANKLKLVETLHSKMVADA-VPPDVSTFNILIRALCKAHQLRPAILMLEDMPN---- 227
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
YG LR P+ ++ ++Q + D+ GA +
Sbjct: 228 ------------YG--------------LR---PDEK--TFTTLMQGFIEEADVEGALR- 255
Query: 185 FKEW--ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
KE ESGC + V NV++ KEGR+E A L+ G P+ T+ +
Sbjct: 256 IKELMVESGCELTSVSV-NVLVNGLCKEGRIEEA--LRFIYEEEGFCPDQVTFNALVNGL 312
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
R G +K ++ ++ ++ G
Sbjct: 313 CRTGHIKQGLEMMDFMLEKG 332
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 2/212 (0%)
Query: 53 MPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAE 112
+P ++ + + L D S A + + +A + F L AG F+
Sbjct: 53 LPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSML 112
Query: 113 RALKELENRNAHRDLSAYQFLITLYGQTGNL-SEVYRIWRSLRLAFPNTANISYLNM-IQ 170
L+++ + D S + + Y + +L +E+ ++ + F + + N+ +
Sbjct: 113 TLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALS 172
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+LV L E + + D+ N++I A K +L A + E G P
Sbjct: 173 LLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRP 232
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ KT+ ++ D++ A+ E +++G
Sbjct: 233 DEKTFTTLMQGFIEEADVEGALRIKELMVESG 264
>gi|357493977|ref|XP_003617277.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518612|gb|AET00236.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 502
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 126/303 (41%), Gaps = 45/303 (14%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE + +M + + + F+S++ ++++ G + A ++MK ++PD+ Y + +
Sbjct: 194 EAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 253
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
ND+SGA +V EM V D T++ L + + + A+ KE+ R
Sbjct: 254 NGYCRNNDVSGALKVRNEMVERSCVM-DVVTYNTLLNGLCRGKMLDDADELFKEMVERGV 312
Query: 124 HRDLSAYQFLITLYGQTGNLSEVY----------------RIWRSL--RLAFPNTANISY 165
D LI Y + GN+++ +WR + R FP+ + S
Sbjct: 313 FPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISREIFPHYISFSI 372
Query: 166 L------------NMIQVLVNLKDLPGAEKCFKEWES-----GCATY---------DIRV 199
L ++I+ + ++ A S C TY D+
Sbjct: 373 LINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINRLLPDLVT 432
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
N ++G +++ GR++ AE + + +G +P+ T+ + Y+ +MK A ++ +
Sbjct: 433 YNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEAFRVHDEML 492
Query: 260 DTG 262
G
Sbjct: 493 QRG 495
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 112/299 (37%), Gaps = 22/299 (7%)
Query: 32 AKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAAD 91
A G K+ + EM+A + P +TYN + L A+ V+++M G D
Sbjct: 117 ALLGSIVKVRVYLSEMEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVG-FCPD 175
Query: 92 WTTFSNLASIYVEAGLFEK-----AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEV 146
TF+ + VE+ F K AER E+ DL ++ +I ++ + G L
Sbjct: 176 AATFN---PVLVES--FRKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRA 230
Query: 147 YRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
+ ++ + Y +I D+ GA K E D+ N ++
Sbjct: 231 LAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNG 290
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
+ L++A+EL + RG P+ T Y ++G+M A+ E +
Sbjct: 291 LCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEK 350
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTS 325
K + R H+ IL LG+ V E LI+ Y AG S
Sbjct: 351 AKELWRDMISREIFPHYIS----------FSILINGFCSLGL-VSESLIKGYLRAGNVS 398
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 8/245 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K L +M+ L +N+L+ K G E ++ +M PD+ T+N +
Sbjct: 124 KVRVYLSEMEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVL 183
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
D+ AERV EM + G V D +FS++ ++ G +A ++++
Sbjct: 184 VESFRKEDVWEAERVFNEMLQCG-VVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGL 242
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y LI Y + ++S ++ + ++Y ++ L K L A++
Sbjct: 243 VPDTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADE 302
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK-TW------E 236
FKE D +I Y K+G + A L E R AK W E
Sbjct: 303 LFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISRE 362
Query: 237 IFSDY 241
IF Y
Sbjct: 363 IFPHY 367
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 124/286 (43%), Gaps = 16/286 (5%)
Query: 18 GFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAER 77
G M +N+++ Y G + ++ +M + PD+YTYN +R L S A
Sbjct: 131 GPDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALA 187
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V+E+M R G D T++ L + +++A + L E+ ++ D+ Y ++
Sbjct: 188 VLEDMFRRG-CLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGI 246
Query: 138 GQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCAT 194
Q G + + ++L PNT +SY +++ L + AEK +E GC
Sbjct: 247 CQEGRVEDAMEFLKNLPSYGCEPNT--VSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304
Query: 195 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 254
++ N++I + G +E A E+ E+ + G PN+ ++ + + + A++
Sbjct: 305 -NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEF 363
Query: 255 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+E + G P + T + + +VD A L LK
Sbjct: 364 VELMVSRG------CYPDIVSYNTLLTALCRNGEVDVAIELLHQLK 403
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 110/263 (41%), Gaps = 7/263 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A LL++M + + +N ++ + G E ++ + + P++ +YN+
Sbjct: 218 KQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIV 277
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L AE+++EEM G + TF+ L S GL E A L+++
Sbjct: 278 LKGLFTAERWEDAEKLMEEMAHKG-CPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYG 336
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPG 180
+ +Y L+ + + + + + R +P+ +SY ++ L ++
Sbjct: 337 CTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDI--VSYNTLLTALCRNGEVDV 394
Query: 181 AEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
A + + + GC+ I N +I K G+ + A EL + +G P+ T+ +
Sbjct: 395 AIELLHQLKDKGCSPVLISY-NTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIA 453
Query: 240 DYYLRNGDMKLAVDCLEKAIDTG 262
R ++ AV K D G
Sbjct: 454 SGLCREDRIEEAVRTFCKVQDMG 476
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 88/236 (37%), Gaps = 1/236 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L+E+M + + FN L++ + G E ++++M P+S +YN
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A I A +E M G D +++ L + G + A L +L+++
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRG-CYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKG 406
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
L +Y +I + G E + + I+Y + L + A
Sbjct: 407 CSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAV 466
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
+ F + + + N ++ K NA +L G PN T+ I
Sbjct: 467 RTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTIL 522
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 99/229 (43%), Gaps = 5/229 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E A +LE+M + +S+ +N L+ + K K ++ M + PD +YN
Sbjct: 321 LVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYN 380
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ AL ++ A ++ ++K G + +++ + +AG ++A L E+ +
Sbjct: 381 TLLTALCRNGEVDVAIELLHQLKDKG-CSPVLISYNTVIDGLTKAGKTKEALELLDEMTS 439
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR-LAFPNTANISYLNMIQVLVNLKDLP 179
+ D+ Y + + + + E R + ++ + TA + Y ++ L ++
Sbjct: 440 KGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAAL-YNAILLGLCKRRETH 498
Query: 180 GAEKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
A F SGC + T +++ A EG ++ A EL + RG
Sbjct: 499 NAIDLFAYMISSGCMPNESTYT-ILVEGLAYEGLVKEARELFAQLCSRG 546
>gi|410110083|gb|AFV61121.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
cujabensis]
Length = 359
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++L+ L K K +I +K S PD YN + A +I EMK
Sbjct: 7 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 66
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T++S L ++YVE F +A E+ DL+ +I +YGQ G
Sbjct: 67 TXG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMA 125
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +++ +R +SY +++V + + A F+ + ++ N M
Sbjct: 126 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 185
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I Y K E A L + + RG +PN+ T+ + + G + A +K +G
Sbjct: 186 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 244
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 7/149 (4%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS++ +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 162 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 221
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 222 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 280
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWR 151
RD + I + G + E ++R
Sbjct: 281 IPRDTA-----IHILAGAGRIEEATYVFR 304
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 106/243 (43%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + +N+++ ++ K + ++I EMK +MP++ +Y+ +
Sbjct: 22 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTXGVMPNTTSYSTLL 81
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V EM R+ + D TT + + +Y + G+ ++A++ +
Sbjct: 82 TMYVENKKFLEALSVFSEM-REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 140
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y L+ +YG E ++R ++ ++Y +MI + + A
Sbjct: 141 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANN 200
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E +S + + +I + K G+L+ A L ++ R G + + ++ Y
Sbjct: 201 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYE 260
Query: 244 RNG 246
R G
Sbjct: 261 RAG 263
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 90/175 (51%), Gaps = 15/175 (8%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 196 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 255
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 256 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 310
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I V++N
Sbjct: 311 EVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS------NVIAVVLN 358
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 7/163 (4%)
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D +SNL + + + KA L+ DL AY +I ++G+ E +
Sbjct: 2 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSL 61
Query: 150 WRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
++ PNT SY ++ + V K A F E D+ N+MI Y
Sbjct: 62 ISEMKTXGVMPNTT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 119
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
+ G + A++L R+ G +PN ++ Y GD +L
Sbjct: 120 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY---GDAEL 159
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++L+ L K K +I +K S PD YN + A +I EMK
Sbjct: 7 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 66
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T++S L ++YVE F +A E+ DL+ +I +YGQ G
Sbjct: 67 TAG-VXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMA 125
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +++ +R +SY +++V + + A F+ + ++ N M
Sbjct: 126 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 185
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I Y K E A L + + RG +PN+ T+ + + G + A +K +G
Sbjct: 186 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 244
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS++ +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 162 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 221
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 222 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 280
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 281 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVV 335
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V V++ AY K + A ++
Sbjct: 336 EVFDKMRGLGYFPDSNVITVVLNAYGKLQEFDKANDV 372
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 196 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 255
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 256 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 310
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I V++N L
Sbjct: 311 EVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGY-FPDS------NVITVVLNAYGKL 363
Query: 176 KDLPGAEKCFKEW-ESGC 192
++ A + E E GC
Sbjct: 364 QEFDKANDVYMEMQEVGC 381
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 106/243 (43%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + +N+++ ++ K + ++I EMK + + P++ +Y+ +
Sbjct: 22 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVXPNTTSYSTLL 81
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V EM R+ + D TT + + +Y + G+ ++A++ +
Sbjct: 82 TMYVENKKFLEALSVFSEM-REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 140
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y L+ +YG E ++R ++ ++Y +MI + + A
Sbjct: 141 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANN 200
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E +S + + +I + K G+L+ A L ++ R G + + ++ Y
Sbjct: 201 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYE 260
Query: 244 RNG 246
R G
Sbjct: 261 RAG 263
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 7/163 (4%)
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D +SNL + + + KA L+ DL AY +I ++G+ E +
Sbjct: 2 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSL 61
Query: 150 WRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
++ A PNT SY ++ + V K A F E D+ N+MI Y
Sbjct: 62 ISEMKTAGVXPNTT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 119
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
+ G + A++L R+ G +PN ++ Y GD +L
Sbjct: 120 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY---GDAEL 159
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 12/263 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
N+L+ + + G E+ ++ +K++ + PD+ TYN +A AA ++ E +I +MK
Sbjct: 173 MNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMK 232
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+ R+ + T++ L S Y + G+ E+ + L L+ H D+ A+ L+ Y Q +
Sbjct: 233 -NARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQEND- 290
Query: 144 SEVYRIWRSLRLAFPNTAN---ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
+ ++ L L N +Y ++ + A+ E + D+R
Sbjct: 291 -QQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAF 349
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
++ Y + GR AE L + G PN + + G M A+ LE ++
Sbjct: 350 AILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLE 409
Query: 261 TGRGDGGKWVPSSETIRTFMRHF 283
G P+ T++T + F
Sbjct: 410 RGEA------PNLNTVQTLVWGF 426
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 54 PDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAER 113
P Y V + + A +S A++++++M+ + +A D F+ + + + G E+A R
Sbjct: 49 PSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMR 108
Query: 114 ALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
++E+ +N S Y LI YG G + ++ ++ +L
Sbjct: 109 VVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQL------------------VLHLLN 150
Query: 174 NLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAK 233
++ P +E + A ++R N ++ A+ +EGRLE A + + G P+A
Sbjct: 151 KTRNSPSSEDGLEP----VARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAV 206
Query: 234 TWEIFSDYYLRNG 246
T+ + Y G
Sbjct: 207 TYNTLAKAYAAAG 219
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 127/334 (38%), Gaps = 53/334 (15%)
Query: 4 KAEALLEKMKELN-LGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+A+ LL++M+E + L S+ FN+++ + G E+ ++QEM+ + P + TYN
Sbjct: 69 EAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQEMRQKNCRPTTSTYNTL 128
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVA------------ADWTTFSNLASIYVEAGLFEK 110
++ A++++ + R + + T + L + + G E+
Sbjct: 129 IKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMNTLLNAWCREGRLEE 188
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A R + +++ D Y L Y G ++E+ ++I
Sbjct: 189 AWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELE-------------------DLIA 229
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ N + P ++R ++I Y + G E +L R + G P
Sbjct: 230 DMKNARLKP----------------NLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHP 273
Query: 231 NAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVD 290
+ + Y + D +L LE +D +G + P T T M + D
Sbjct: 274 DVVAFNTLLKGYSQENDQQLK---LEMVLDLMAANGVR--PDVTTYSTIMNWWSSAGMAD 328
Query: 291 GAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
A+ L +++ V F L + Y +GRT
Sbjct: 329 KAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRT 362
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
E L+ MK L + + L++ Y + G PE+ ++ +K + PD +N ++
Sbjct: 225 EDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKG 284
Query: 66 LAAVNDIS-GAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ ND E V++ M +G V D TT+S + + + AG+ +KA+ L E++
Sbjct: 285 YSQENDQQLKLEMVLDLMAANG-VRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVK 343
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRL 155
D+ A+ L Y ++G E + + + L
Sbjct: 344 PDVRAFAILAKGYVRSGRTHEAESLLQDMSL 374
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S PD YN
Sbjct: 24 LFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EMK G V D ++S L ++YVE F +A E+
Sbjct: 84 AMINVFGKAKLFREARSLISEMKTAG-VTPDTASYSTLLTMYVENKKFLEALSIFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ +R +SY +++V + +
Sbjct: 143 IKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PN+ T+
Sbjct: 203 AIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAMLFQKLRSSG 284
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 168
A L+ DL AY +I ++G+ E + ++ A P+TA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTA--SYSTL 120
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 229 DPNAKTWEIFSDYYLRNGDMKL 250
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P+S TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSG-VDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD++ I + G + E ++R A + MI + K
Sbjct: 321 IPRDIA-----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V +++ AY K + A ++
Sbjct: 376 EVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDV 412
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D I AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILAGAGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + GN+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGY-FPDS------NVIALVLNAYGKL 403
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
+ A + E E GC D
Sbjct: 404 HEFDKANDVYMEMQEVGCVFSD 425
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 115/309 (37%), Gaps = 15/309 (4%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ L+ YA+ G A + M+AS I P+ + Y + A A D+ GA EEM
Sbjct: 20 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 79
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + F ++ S Y AG E AE ++ + N Y ++ Y Q GN+
Sbjct: 80 SQG-IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 138
Query: 144 SEVYRIWRSL-RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE--SGCATYDIRVT 200
V + + F + Y ++ ++D EKC + C T
Sbjct: 139 ETVEALLAQMEEEGFQGNLGL-YTTVLNGFAEIRD---EEKCLSFFHRLKACGLSPTAAT 194
Query: 201 -NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
++ + K G + A ++ E + G PN + + D Y R GD A E +
Sbjct: 195 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 254
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYA 319
G P + F + +D A G LE ++ +E + ++ Y
Sbjct: 255 SAG------LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYV 308
Query: 320 AAGRTSPVM 328
G +
Sbjct: 309 KGGNIQKAL 317
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 110/260 (42%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EK + ++K L ++ + ++ L+ K G+ K I++EM + P+ Y +
Sbjct: 174 EKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMI 233
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
M A D + A +V E+M G + D ++ L + +AG +KA L+ +E
Sbjct: 234 MDGYARGGDFTAAFKVWEDMVSAG-LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANR 292
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y ++ Y + GN+ + ++ ++ A +SY +++ L + + A
Sbjct: 293 LLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENAR 352
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
E + + R + YA+ G +E A + +R ++ + +
Sbjct: 353 LMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKAC 412
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
++G M+ A + ++ D G
Sbjct: 413 CKSGAMQRAAEVFQQITDAG 432
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 147/353 (41%), Gaps = 12/353 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E A A E+M + + F S+++ YA G+ E ++ KA +++P YN
Sbjct: 69 EGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSI 128
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++A ++ E ++ +M+ +G + ++ + + + E EK L+
Sbjct: 129 VQAYCQAGNMETVEALLAQMEEEG-FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 187
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y ++ L+ + GN+++ I + + + Y ++ D A
Sbjct: 188 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 247
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K +++ S DI + N+++ A+ K GR++ A + E P +T+ D Y
Sbjct: 248 KVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGY 307
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL-EILKK 301
++ G+++ A++ ++ G P + + + + + ++ A L E+L
Sbjct: 308 VKGGNIQKALEVFDRIKTAG------LRPGVVSYNSLLSGLAKARQMENARLMLNEMLAN 361
Query: 302 AVDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVEVS-EASKKLLEAIC 351
V + L YA AG M +R+K E + + A LL+A C
Sbjct: 362 GVVP-NERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACC 413
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 107/260 (41%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA +LE ++ L + + S++ Y K G+ +K + +K + + P +YN
Sbjct: 279 DKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSL 338
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ LA + A ++ EM +G V + +++ L Y AG EKA + ++ N
Sbjct: 339 LSGLAKARQMENARLMLNEMLANG-VVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN 397
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ AY L+ ++G + +++ + A I+Y M+ +L A
Sbjct: 398 LAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKAR 457
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + D I A + G E E R + + NA+T+ +
Sbjct: 458 DLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGW 517
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
L D A+ C E+A +G
Sbjct: 518 LAAADPDQAISCYEQAKASG 537
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 149/344 (43%), Gaps = 13/344 (3%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKA-SSIMPDSYTY 59
M KA ++ ++K ++ +N+L+ + GH EKI + E+ + + PD+ TY
Sbjct: 174 MVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITY 233
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + A + A R+ +EMK +G + ++ + ++Y + E A R ++E++
Sbjct: 234 SALISAFGKLERYDFAFRLFDEMKENGLHPTE-KIYTTILAMYFKLNKVEAALRLVEEMK 292
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKD 177
+ + Y LI G+ G + + Y ++ ++ P+ I+ N+I +L
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLIN--NLINILGRAGR 350
Query: 178 LPGAEKCFKEWES-GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
L A K F + +S CA + V+ + + A E+ + G P++ T+
Sbjct: 351 LEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYA 410
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
I D + + ++ A+ LE+ + G + P + + + K + A
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKG------FPPCPAAYCSLIDSLGRAKRYEAANELF 464
Query: 297 EILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKMEKVEVS 340
+ LK+ V+ +I+ + GR S + +M+K+ S
Sbjct: 465 QELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCS 508
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 4/251 (1%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAI-IQEMKASSIMPDSYTYNV 61
E A L KM L + + +N+++ ++ P A+ ++MKA+ I P S+TY +
Sbjct: 352 EDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAI 411
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ N + A ++EEM G + +L A +E A +EL+
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFPPCP-AAYCSLIDSLGRAKRYEAANELFQELKEN 470
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
Y +I +G G LS+ ++ ++ + +Y ++ ++ + A
Sbjct: 471 CGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEA 530
Query: 182 EKCFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ E+GC T DI+ N+++ AK G + A E+ + + P+A ++
Sbjct: 531 HSLMRNMRENGC-TPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILS 589
Query: 241 YYLRNGDMKLA 251
R G ++A
Sbjct: 590 CLSRAGMFEMA 600
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A +L+ M+E N ++ AKTG P++ + +MK S IMPD+ +YN
Sbjct: 526 MIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYN 585
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNL 98
+ L+ A +++ EMK G D T+S++
Sbjct: 586 TILSCLSRAGMFEMAAKLMREMKLKG-FEYDSITYSSI 622
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 5/197 (2%)
Query: 2 TEKAEALLEKMKELNLGFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
EKA LLE+M E GF P + SL+ + E + QE+K + + Y
Sbjct: 422 VEKALLLLEEMDEK--GFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVY 479
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
V ++ +S A + EMK+ G + D T++ L S + AG+ ++A ++ +
Sbjct: 480 AVMIKHFGNCGRLSDAVDLFCEMKKLG-CSPDVYTYNALMSGMIRAGMIDEAHSLMRNMR 538
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
D+ ++ ++ +TG ++ ++ + +SY ++ L
Sbjct: 539 ENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFE 598
Query: 180 GAEKCFKEWESGCATYD 196
A K +E + YD
Sbjct: 599 MAAKLMREMKLKGFEYD 615
>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
macrophylla]
Length = 381
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++L+ L K K +I +K S PD YN + A +I EMK
Sbjct: 7 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 66
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T++S L ++YVE F +A E+ DL+ +I +YGQ G
Sbjct: 67 TAG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMA 125
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +++ +R +SY +++V + + A F+ + ++ N M
Sbjct: 126 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 185
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I Y K E A L + + RG +PN+ T+ + + G + A +K +G
Sbjct: 186 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 244
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS++ +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 162 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 221
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 222 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 280
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 281 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKXKKYSNVV 335
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V ++ AY K + A ++
Sbjct: 336 EVFNKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDV 372
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + +N+++ ++ K + ++I EMK + +MP++ +Y+ +
Sbjct: 22 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 81
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V EM R+ + D TT + + +Y + G+ ++A++ +
Sbjct: 82 TMYVENKKFLEALSVFSEM-REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 140
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y L+ +YG E ++R ++ ++Y +MI + + A
Sbjct: 141 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANN 200
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E +S + + +I + K G+L+ A L ++ R G + + ++ Y
Sbjct: 201 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYE 260
Query: 244 RNG 246
R G
Sbjct: 261 RAG 263
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 196 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 255
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 256 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 310
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPG 180
+D++ ++ +I L + S V ++ +R FP++ I+ ++ L++
Sbjct: 311 EVKDITVFERMIHLLSKXKKYSNVVEVFNKMRGLGYFPDSDVIA--XVLNAYGKLQEFDK 368
Query: 181 AEKCFKEW-ESGC 192
A + E E GC
Sbjct: 369 ANDVYMEMQEVGC 381
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 7/163 (4%)
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D +SNL + + + KA L+ DL AY +I ++G+ E +
Sbjct: 2 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSL 61
Query: 150 WRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
++ A PNT SY ++ + V K A F E D+ N+MI Y
Sbjct: 62 ISEMKTAGVMPNTT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 119
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
+ G + A++L R+ G +PN ++ Y GD +L
Sbjct: 120 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY---GDAEL 159
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 3/259 (1%)
Query: 3 EKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EK L+KMK + + + +N L+ +A++G +++ A+ +++ S + PD YT+N
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A I E V+ M R D TF+ L Y + FEK E+ K L
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L + +I YG+ + + +++ + + I+Y MI + + A
Sbjct: 308 KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRA 367
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F+E N M+ Y + G A++L A P+A T++
Sbjct: 368 REIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 427
Query: 242 YLRNGDMKLAVDCLEKAID 260
Y + DMK V L K ++
Sbjct: 428 YTK-ADMKEQVQILMKKME 445
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 4/244 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA-ERV---I 79
++ L+++ K G + EMK S PD+ YN + A D + A E+V +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
++MK R + T++ L + ++G ++ K+L+ D+ + ++ YG+
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
G + E+ + +R I++ +I ++ E+ FK +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
N MI Y K ++ AE + ++ P+ T+E Y G + A + E+
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 260 DTGR 263
++ R
Sbjct: 376 ESDR 379
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/255 (18%), Positives = 95/255 (37%), Gaps = 15/255 (5%)
Query: 78 VIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLY 137
V M++ D +S L S+ + G A E++N D S Y LIT +
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 138 GQTGNLSEVYRIWR-------SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES 190
T + ++ R + PN ++Y +++ + FK+ +
Sbjct: 179 LHTRDKAKALEKVRGYLDKMKGIERCQPNV--VTYNILLRAFAQSGKVDQVNALFKDLDM 236
Query: 191 GCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
+ D+ N ++ AY K G ++ E + R R P+ T+ + D Y + + +
Sbjct: 237 SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEK 296
Query: 251 AVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEV 310
+ + + K P+ T + + ++ + + +D AE + +
Sbjct: 297 MEQTFKSLMRS------KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 311 FEPLIRTYAAAGRTS 325
+E +I Y G S
Sbjct: 351 YECMIMMYGYCGSVS 365
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 1/254 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
L+KM++ + + +++L+ L K K +I +K S PD YN +
Sbjct: 39 LQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGK 98
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
A +I EMK G V + ++S L ++YVE F +A E+ DL+
Sbjct: 99 AKLFREARALISEMKTAG-VMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLT 157
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
+I +YGQ G E +++ +R T +SY +++V + + A F+
Sbjct: 158 TCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLM 217
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
+ ++ N M+ Y K E A L + + RG +PN+ T+ + + G +
Sbjct: 218 QRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKL 277
Query: 249 KLAVDCLEKAIDTG 262
A +K +G
Sbjct: 278 DRAAMLFQKLRSSG 291
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 8/211 (3%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
+ EM+ ++ PD YTY+ + A +++M++D RV D +SNL +
Sbjct: 2 GLFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIEL 60
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPN 159
+ + KA L+ DL AY +I ++G+ E + ++ A PN
Sbjct: 61 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPN 120
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
TA SY ++ + V K A F E D+ N+MI Y + G + A++L
Sbjct: 121 TA--SYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 178
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
R+ G + N ++ Y GD +L
Sbjct: 179 FWGMRKMGIETNVVSYNTLLRVY---GDAEL 206
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 15/238 (6%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P+S TY+ +
Sbjct: 209 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 268
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL++ N
Sbjct: 269 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDN 327
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI + K A
Sbjct: 328 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANAV 382
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+ F + D V +++ AY K L+ A ++ + G +FSD
Sbjct: 383 EVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQEVGC--------VFSD 432
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 243 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 302
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+K + D T LA AG E+A ++ +
Sbjct: 303 IVAYERAGLVAHAKRLLHELKSPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 357
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N EV+ R L FP++ N+I +++N L
Sbjct: 358 EVKDITVFERMIHLFSKYKKYANAVEVFDKMRGLGY-FPDS------NVIALVLNAYGKL 410
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
+L A + E E GC D
Sbjct: 411 HELDKANDVYMEMQEVGCVFSD 432
>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
brasiliensis]
Length = 382
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++L+ L K K +I +K S PD YN + A +I EMK
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 67
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T++S L ++YVE F +A E+ DL+ +I +YGQ G
Sbjct: 68 TAG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMA 126
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +++ +R +SY +++V + + A F+ + ++ N M
Sbjct: 127 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 186
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
I Y K E A L + + RG +PN+ T+ + + G + A +K +G
Sbjct: 187 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 245
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS++ +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 222
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 223 SIWGKVGKLDRAAMLFQKLRSSG-VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDN 281
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 282 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYXNVV 336
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V V++ AY K + A ++
Sbjct: 337 EVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDV 373
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KA ++ ++K + +N+++ ++ K + ++I EMK + +MP++ +Y+ +
Sbjct: 23 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 82
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V EM R+ + D TT + + +Y + G+ ++A++ +
Sbjct: 83 TMYVENKKFLEALSVFSEM-REIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 141
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ +Y L+ +YG E ++R ++ ++Y +MI + + A
Sbjct: 142 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANN 201
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+E +S + + +I + K G+L+ A L ++ R G + + ++ Y
Sbjct: 202 LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYE 261
Query: 244 RNG 246
R G
Sbjct: 262 RAG 264
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D +
Sbjct: 197 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 256
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 257 IVAYERAGLVAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 311
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I V++N L
Sbjct: 312 EVKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGY-FPDS------NVIAVVLNAYGKL 364
Query: 176 KDLPGAEKCFKEW-ESGC 192
++ A + E E GC
Sbjct: 365 QEFDKANDVYMEMQEVGC 382
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 7/163 (4%)
Query: 90 ADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRI 149
D +SNL + + + KA L+ DL AY +I ++G+ E +
Sbjct: 3 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSL 62
Query: 150 WRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
++ A PNT SY ++ + V K A F E D+ N+MI Y
Sbjct: 63 ISEMKTAGVMPNTT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVY 120
Query: 208 AKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
+ G + A++L R+ G +PN ++ Y GD +L
Sbjct: 121 GQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY---GDAEL 160
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K+E ++ ++ NL + FNS ++ G+ K + Q+M ++PD ++Y M
Sbjct: 306 KSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMM 365
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
V DIS A + + +M + G + T++ L + G E AE + +
Sbjct: 366 AGYCKVKDISNALKYLGKMLKRG-IRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGL 424
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ +Y L+ YG+ G+L + + + +R A + ++Y +I L+ + A+
Sbjct: 425 VPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKD 484
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
E + D+ +IG ++ +G E A L +P+ T + Y
Sbjct: 485 ILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYC 544
Query: 244 RNGDMKLAVDCLEKAIDTG 262
R M A K +D G
Sbjct: 545 RTRCMAEANVLFHKMLDAG 563
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E AE L ++M L + +N+LM Y K GH +K ++ M+++ + PD TYN+
Sbjct: 410 EMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNIL 469
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L ++ A+ +++E+ R G + D TF+N+ + G FE+A + +
Sbjct: 470 IHGLIKRGLVNEAKDILDELTRRG-FSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHH 528
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ L+ Y +T ++E ++ + A I Y ++I +L ++ A
Sbjct: 529 LEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDA 587
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 109/248 (43%), Gaps = 4/248 (1%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L++MK LG ++ + ++ Y G+ + ++ EMK I PD Y + + +L
Sbjct: 208 FLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLC 267
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ + A ++ +M + G V D + S++ Y + G K+E A+ LE N ++
Sbjct: 268 KMSLLKEATSILFKMTQMG-VFLDSVSVSSVVDGYCKVG---KSEEAMDVLEVFNLSPNI 323
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ I+ GN+ + ++++ + SY M+ +KD+ A K +
Sbjct: 324 FVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGK 383
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
+ ++I + K G +E AE L +R G P+ ++ + Y + G
Sbjct: 384 MLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGH 443
Query: 248 MKLAVDCL 255
++ A + L
Sbjct: 444 LQKAFELL 451
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 1/247 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A + E+M E L +++ +L+ + K G + EM + D YN
Sbjct: 329 QDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNAL 388
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ V D+ A ++EEM++DG + D T++ L + G + A +E+ +
Sbjct: 389 VNGFCRVRDMKAANDIVEEMRKDG-LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEG 447
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D Y LI+ + G + RI + A N +Y +I D+
Sbjct: 448 VALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGF 507
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
K KE ++ I NV++ + G+++NA+ L G PN T+ I D +
Sbjct: 508 KHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGH 567
Query: 243 LRNGDMK 249
++G ++
Sbjct: 568 CKHGKVR 574
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 3/244 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
FN+LM+ K A+ M + I PD YTY +++ L I A + EEM
Sbjct: 280 FNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC 339
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + + + L + + G E+ R DL AY L+ + + ++
Sbjct: 340 ERG-LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDM 398
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCATYDIRVTNV 202
I +R ++Y +I +L A + +E + G A D+ T
Sbjct: 399 KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT-A 457
Query: 203 MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+I +K GR +AE + G P+ T+ + D + +NGD+K L++ + G
Sbjct: 458 LISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKG 517
Query: 263 RGDG 266
+ G
Sbjct: 518 KNPG 521
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 3/199 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N+L+ + + + I++EM+ + PD TY + ++ A + +EM
Sbjct: 385 YNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMS 444
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
+G VA D T++ L S +AG AER L E+ D + Y +I + + G++
Sbjct: 445 DEG-VALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDV 503
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWES-GCATYDIRVTNV 202
++ + ++ N ++Y ++ +L + A+ + G DI N+
Sbjct: 504 KTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDI-TYNI 562
Query: 203 MIGAYAKEGRLENAEELKE 221
++ + K G++ + EELK
Sbjct: 563 LLDGHCKHGKVRDTEELKS 581
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ ++ I D+ YN + AL + S + E+MK+DG + D +++ L S +
Sbjct: 424 LLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG-PSPDIFSYNILISSF 482
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
AG E+A + +ELEN + D+ ++ LI G+ G++ E + ++ +R +
Sbjct: 483 GRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDV 542
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +I+ + A + F E + + +I N+++ + GR A +L +
Sbjct: 543 VTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAK 602
Query: 223 ARRRGADPNAKTWEIF 238
+++G P++ T+ +
Sbjct: 603 LKQQGLTPDSITYAVL 618
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 99/236 (41%), Gaps = 3/236 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ AK +++ + ++MK PD YTY + +R + + + +EM
Sbjct: 263 YNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMT 322
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL--ENRNAHRDLSAYQFLITLYGQTG 141
G + ++ + + +K ++ E N + S Y +L+ + G
Sbjct: 323 EKG-YTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLG 381
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
+ SE +R++ ++ +Y++M++ L + A + + D + N
Sbjct: 382 HASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYN 441
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEK 257
++ A K + + +L E+ ++ G P+ ++ I + R G ++ AV E+
Sbjct: 442 TVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEE 497
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 135/321 (42%), Gaps = 7/321 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A + E+MK + +N+L+ +Y K+ P + +++EM+AS P TYN
Sbjct: 306 LYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + A + +M + G + D T++ L S + + G + A + +E+
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKG-IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + LI ++G GN E+ +++ +++ +++ ++ V
Sbjct: 425 AGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSE 484
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
FKE + + N +I AY++ G + A + R G P+ T+
Sbjct: 485 VSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLA 544
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
R G + + L + D G+ P+ T + + + K+V+ E +
Sbjct: 545 ALARGGLWEQSEKVLAEMKD------GRCKPNELTYCSLLHAYANGKEVERMSALAEEIY 598
Query: 301 KAVDDLGVEVFEPLIRTYAAA 321
+ + + + L+ Y+ +
Sbjct: 599 SGIIEPQAVLLKTLVLVYSKS 619
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 135/335 (40%), Gaps = 42/335 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + ++MK FN+L++ Y++ G ++ AI + M + + PD TYN
Sbjct: 481 MDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYN 540
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS-------------------- 100
+ ALA +E+V+ EMK DGR + T+ +L
Sbjct: 541 AVLAALARGGLWEQSEKVLAEMK-DGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYS 599
Query: 101 ---------------IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
+Y ++ L + ERA EL + D++ ++++YG+ +S+
Sbjct: 600 GIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSK 659
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
I ++ + + +Y +++ + + +E +E + DI N +I
Sbjct: 660 TNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIF 719
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AY + GR++ A + + G P+ T+ F Y + A+D ++ I G
Sbjct: 720 AYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNG--- 776
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
P+ T + + F + D A F+ L+
Sbjct: 777 ---CKPNQNTYNSLIDWFCKLNRRDEASSFISNLR 808
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K L++ MK + +N+L++ + E+ + +EMKA+ PD TYN +
Sbjct: 274 KIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALL 333
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V++EM+ G A T+++L S Y GL ++A ++ +
Sbjct: 334 DVYGKSRRPREAMEVLKEMEASG-FAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGI 392
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y L++ + +TG +++ +R+A ++ +I++ N + K
Sbjct: 393 KPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMK 452
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+E + DI N ++ + + G + + +R G P T+ Y
Sbjct: 453 VFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYS 512
Query: 244 RNGDMKLAVDCLEKAIDTG 262
R G A+ + +D G
Sbjct: 513 RCGFFDQAMAIYRRMLDAG 531
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 43/257 (16%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +LL ++ + + SL+T YA G + + ++++ P TYNV +
Sbjct: 204 AASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILN 263
Query: 65 ALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + I+G +++ MK G VA D T++ L S L+E+A +E++
Sbjct: 264 VYGKMGMPWSKIAG---LVDSMKSSG-VAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA 319
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y L+ +YG++ E
Sbjct: 320 AGFSPDKVTYNALLDVYGKSRRPRE----------------------------------- 344
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + KE E+ I N +I AYA++G L+ A ELK + ++G P+ T+
Sbjct: 345 AMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLS 404
Query: 241 YYLRNGDMKLAVDCLEK 257
+ + G A+ E+
Sbjct: 405 GFEKTGKDDYAMKVFEE 421
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 5/257 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+ A LL KM++ L + +N+++ K H + + +EM+ I P+ TY+
Sbjct: 851 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 910
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L S A R++ +M + ++ D TFS L +V+ G +AE+ E+ R
Sbjct: 911 LISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+ + Y LI + L E +++ + + FP+ ++Y +I+ K +
Sbjct: 970 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV--VTYNTLIKGFCKYKRVE 1027
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
+ F+E + N++I + G + A+E+ + G PN T+
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 1087
Query: 240 DYYLRNGDMKLAVDCLE 256
D +NG ++ A+ E
Sbjct: 1088 DGLCKNGKLEKAMVVFE 1104
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 131/321 (40%), Gaps = 7/321 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A AL+++M + + ++ K G + ++ +M+ + P YN +
Sbjct: 818 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + A + +EM+ G + + T+S+L S G + A R L ++ R
Sbjct: 878 DGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 936
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ D+ + LI + + G L E +++ + + + ++Y ++I L A++
Sbjct: 937 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 996
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+ S D+ N +I + K R+E E+ +RG N T+ I
Sbjct: 997 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 1056
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ GD +A + ++ + G P+ T T + + ++ A E L+++
Sbjct: 1057 QAGDCDMAQEIFKEMVSDG------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110
Query: 304 DDLGVEVFEPLIRTYAAAGRT 324
+ + + +I AG+
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKV 1131
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L ++M + ++ S + ++SL+ + ++ + + M + PD TYN +
Sbjct: 958 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 1017
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + V EM + G V + T++ L +AG + A+ KE+ +
Sbjct: 1018 KGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 1076
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ Y L+ + G L + ++ L+ + +Y MI+ + +
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 1136
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F D+ N MI + ++G E A+ L + + G PN+ + L
Sbjct: 1137 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 1196
Query: 244 RNGD 247
R+GD
Sbjct: 1197 RDGD 1200
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 1/238 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ + E M + + +N+L+ + K E+ + +EM ++ ++ TYN+
Sbjct: 992 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L D A+ + +EM DG V + T++ L + G EKA + L+
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I + G + + + ++ +L L ++Y MI A+
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 1170
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
FKE + + N +I A ++G E + EL + R G +A T + ++
Sbjct: 1171 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 1228
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 103/248 (41%), Gaps = 1/248 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +L++KM E+ + +N+++ KT +E++ I P+ TY +
Sbjct: 277 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 336
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + S A R++ +M + ++ + T+S L +V+ G +A+ +E+ +
Sbjct: 337 GLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 395
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ Y LI + E +++ + +SY +I K + K
Sbjct: 396 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 455
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F+E + N +I + + G ++ A+E + G P+ T+ I
Sbjct: 456 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 515
Query: 245 NGDMKLAV 252
NG+++ A+
Sbjct: 516 NGELEKAL 523
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 1/193 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ +M I P+ TY+ + A + A+ + EEM R + D T+S+L +
Sbjct: 350 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSIDPDIVTYSSLINGL 408
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
++A + + ++ D+ +Y LI + + + + +++R + +
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +IQ D+ A++ F + + + DI N+++G G LE A + E
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528
Query: 223 ARRRGADPNAKTW 235
++R D + T+
Sbjct: 529 MQKREMDLDIVTY 541
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 3/232 (1%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A LL M + + + + +++L+ + K G + + +EM SI PD TY+ +
Sbjct: 347 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 406
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + I A ++ + M G AD +++ L + + +A E + +E+ R
Sbjct: 407 GLCLHDRIDEANQMFDLMVSKG-CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGAEK 183
+ Y LI + Q G++ + + + F + +I +Y ++ L + +L A
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALV 524
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
F++ + DI +I K G++E A L +G P+ T+
Sbjct: 525 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 576
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/320 (17%), Positives = 124/320 (38%), Gaps = 7/320 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A ++L KM +L + SL+ + + +++ +M PD YN +
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+L ++ A +E++R G + + T++ L + + + A R L ++ +
Sbjct: 302 SLCKTKRVNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 360
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y L+ + + G + E ++ + + ++Y ++I L + A +
Sbjct: 361 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 420
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F S D+ N +I + K R+E+ +L +RG N T+ + +
Sbjct: 421 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 480
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVD 304
GD+ A + + D P T + +++ A E ++K
Sbjct: 481 AGDVDKAQEFFSQM------DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 534
Query: 305 DLGVEVFEPLIRTYAAAGRT 324
DL + + +IR G+
Sbjct: 535 DLDIVTYTTVIRGMCKTGKV 554
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 1/152 (0%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +N+L+ + K E + +EM ++ ++ TYN ++ D+ A+ +
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M G ++ D T++ L + G EKA ++++ R D+ Y +I +TG
Sbjct: 494 MDFFG-ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 552
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLNMIQVLV 173
+ E + ++ SL L ++Y M+ L
Sbjct: 553 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 584
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/216 (18%), Positives = 91/216 (42%), Gaps = 1/216 (0%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
S + FN L++ K + + ++ ++M+ I D YT+N+ + +S A ++
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 246
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
+M + G D T +L + + A + ++ D+ AY +I +
Sbjct: 247 GKMLKLG-YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
T +++ + ++ + ++Y ++ L N A + + T ++
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTW 235
+ ++ A+ K G++ A+EL E R DP+ T+
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E L +M + L +++ +N+L+ + + G +K +M I PD +TYN+
Sbjct: 449 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 508
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L ++ A + E+M++ + D T++ + + G E+A L +
Sbjct: 509 LLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 567
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
D+ Y +++ G L EV ++ ++
Sbjct: 568 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 600
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 120/322 (37%), Gaps = 44/322 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA + E M++ + + + +++ KTG E+ ++ + + PD TY
Sbjct: 520 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 579
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK------AERALK 116
M L + E + +MK++G + D T I + A L +K A LK
Sbjct: 580 MSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--GDITLSAELIKKMLSCGYAPSLLK 637
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
++++ + LS L +G S YR S L LK
Sbjct: 638 DIKSGVCKKALS------LLRAFSGKTSYDYREKLSR----------------NGLSELK 675
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
L A F E I + ++ A AK + + L E+ + G N T+
Sbjct: 676 -LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734
Query: 237 IFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFL 296
I + + R + LA+ L K + G + P+ T+ + + + K + A
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLG------YEPNIVTLSSLLNGYCHSKRISEAVAL- 787
Query: 297 EILKKAVDDLGVEVFEPLIRTY 318
VD + V ++P T+
Sbjct: 788 ------VDQMFVTGYQPNTVTF 803
>gi|125556718|gb|EAZ02324.1| hypothetical protein OsI_24426 [Oryza sativa Indica Group]
gi|125598467|gb|EAZ38247.1| hypothetical protein OsJ_22623 [Oryza sativa Japonica Group]
Length = 478
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AEALL +M+ L L + +N+L+ T H ++ +M + + TY +
Sbjct: 102 TLEAEALLLEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRRTYML 161
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A + + V+ EMKR G + D +S L +Y + G+++KA + E++
Sbjct: 162 LLNAYARAGRLEDSWWVLGEMKRRG-IRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQEL 220
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y LI +G+ G L++ +++ + ++ ++I+ + + A
Sbjct: 221 GVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRA 280
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F + D ++ +I ++G+ + ++L R RG + + + D
Sbjct: 281 LRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDI 340
Query: 242 YLRNGDMKLAVDCL 255
Y + G + A DC+
Sbjct: 341 YGQYGHFRDAHDCV 354
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 36/245 (14%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
LL M+ L S + L+ A+ G + A++ EM+ + PD+ YN + L
Sbjct: 73 LLADMQAAGLRPSGAAYARLIRALARAGRTLEAEALLLEMRRLGLRPDAAHYNALLEGLL 132
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
+ + A+R++ +M DG VA + T+ L + Y AG E + L E++ R D
Sbjct: 133 STAHLRLADRLLLQMADDG-VARNRRTYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDT 191
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ Y L+ LY G +W+ +++ +++L G E
Sbjct: 192 AGYSTLVRLYRDNG-------MWK---------------KATDLIMEMQEL-GVE----- 223
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
D+++ N +I + K G+L +A ++ ++ G P+ TW ++ R G+
Sbjct: 224 -------LDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGN 276
Query: 248 MKLAV 252
K A+
Sbjct: 277 TKRAL 281
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 115/285 (40%), Gaps = 7/285 (2%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+L +MK + + +++L+ LY G +K +I EM+ + D YN +
Sbjct: 178 VLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFG 237
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
++ A +V ++M +G V D TT+++L + G ++A R ++ + D
Sbjct: 238 KYGQLADARKVFDKMCAEG-VKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDP 296
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKE 187
+ +I+ G+ G E+ +++ +R + Y ++ + A C
Sbjct: 297 KIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYAVLVDIYGQYGHFRDAHDCVAA 356
Query: 188 WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
++ + V+ AYA++G E + + G +PN + + + G
Sbjct: 357 LKAENLQLSPSIFCVLANAYAQQGLCEQTVNVLQLMEAEGIEPNLVMLNLLINAFGTAGR 416
Query: 248 MKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
A+ L+ D+G P T T M+ F + K + A
Sbjct: 417 HLEALAVLQHIKDSGMS------PDVVTYTTLMKAFMRAKKFEKA 455
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 104/253 (41%), Gaps = 19/253 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M +KA L+ +M+EL + +N L+ + K G + +M A + PD T+N
Sbjct: 206 MWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWN 265
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+R V + A R M+ +G + D F + S E G +++ ++ + N
Sbjct: 266 SLIRWHCRVGNTKRALRFFAAMQEEG-MYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRN 324
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRL--------AFPNTAN-ISYLNMIQV 171
R + Y L+ +YGQ G+ + + +L+ F AN + + +
Sbjct: 325 RGLKESGAVYAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCEQ 384
Query: 172 LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPN 231
VN+ L AE ++ + N++I A+ GR A + + + G P+
Sbjct: 385 TVNVLQLMEAEGI---------EPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPD 435
Query: 232 AKTWEIFSDYYLR 244
T+ ++R
Sbjct: 436 VVTYTTLMKAFMR 448
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 5/257 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T+ A LL KM++ L + +N+++ K H + + +EM+ I P+ TY+
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L S A R++ +M + ++ D TFS L +V+ G +AE+ E+ R
Sbjct: 297 LISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLP 179
+ + Y LI + L E +++ + + FP+ ++Y +I+ K +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV--VTYNTLIKGFCKYKRVE 413
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
+ F+E + N++I + G + A+E+ + G PN T+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 240 DYYLRNGDMKLAVDCLE 256
D +NG ++ A+ E
Sbjct: 474 DGLCKNGKLEKAMVVFE 490
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 131/321 (40%), Gaps = 7/321 (2%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A AL+++M + + ++ K G + ++ +M+ + P YN +
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + A + +EM+ G + + T+S+L S G + A R L ++ R
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ D+ + LI + + G L E +++ + + + ++Y ++I L A++
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+ S D+ N +I + K R+E E+ +RG N T+ I
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ GD +A + ++ + G P+ T T + + ++ A E L+++
Sbjct: 443 QAGDCDMAQEIFKEMVSDG------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 304 DDLGVEVFEPLIRTYAAAGRT 324
+ + + +I AG+
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKV 517
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE L ++M + ++ S + ++SL+ + ++ + + M + PD TYN +
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + V EM + G V + T++ L +AG + A+ KE+ +
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
++ Y L+ + G L + ++ L+ + +Y MI+ + +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F D+ N MI + ++G E A+ L + + G PN+ + L
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 244 RNGD 247
R+GD
Sbjct: 583 RDGD 586
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 1/238 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A+ + E M + + +N+L+ + K E+ + +EM ++ ++ TYN+
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
++ L D A+ + +EM DG V + T++ L + G EKA + L+
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
+ Y +I + G + + + ++ +L L ++Y MI A+
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
FKE + + N +I A ++G E + EL + R G +A T + ++
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
>gi|242078445|ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
gi|241940341|gb|EES13486.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
Length = 602
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 7/253 (2%)
Query: 3 EKAEALLEKM---KELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
++AEA+ E + K + F+ ++ +Y K G + + +M I + T+
Sbjct: 227 KEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERKIPLSTVTF 286
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
N M ++S + ++M+R G + D ++S L Y +A E+A +E+
Sbjct: 287 NSLMSFETDYKEVSS---IYDQMQRAG-MKPDVVSYSLLIKAYGKARREEEALAVFEEML 342
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
+ +Y L+ + +G + E +++++R SY M+ VN D+
Sbjct: 343 DAGVRPTRKSYNILLDAFAISGLVDEANTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMN 402
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
GAEK F+ + ++ V ++ Y+K +E + ER R +G +PN +
Sbjct: 403 GAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKVMRVYERMRIQGVEPNQTIYTTIM 462
Query: 240 DYYLRNGDMKLAV 252
D + RN D AV
Sbjct: 463 DAHGRNSDFGNAV 475
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 92/213 (43%), Gaps = 1/213 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
++ ++M+ + + ++ L+ Y K E+ A+ +EM + + P +YN+ + A
Sbjct: 301 SIYDQMQRAGMKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAF 360
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
A + A V + M+R RV D +++ + YV A AE+ + +++ +
Sbjct: 361 AISGLVDEANTVFKAMRRH-RVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPN 419
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ Y L+ Y + N+ +V R++ +R+ Y ++ D A FK
Sbjct: 420 VVVYGTLMKGYSKLNNVEKVMRVYERMRIQGVEPNQTIYTTIMDAHGRNSDFGNAVIWFK 479
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
E E+ D + N+++ + A EL
Sbjct: 480 EMEARGYPPDQKAKNILLSLANTPEEQQEANEL 512
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 106/261 (40%), Gaps = 5/261 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+AE +L+ M + S + LM Y + K A+ + M+ S P TY + +
Sbjct: 158 RAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTSGPEPSPVTYQIIL 217
Query: 64 RALAAVNDISGAERVIEEMKRDGRVA--ADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++L + AE + E++ + R + D F + +Y +AG + +A + ++ R
Sbjct: 218 KSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSER 277
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
+ L++ + EV I+ ++ A +SY +I+ + A
Sbjct: 278 KIPLSTVTFNSLMSF---ETDYKEVSSIYDQMQRAGMKPDVVSYSLLIKAYGKARREEEA 334
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
F+E + N+++ A+A G ++ A + + RR +P+ ++
Sbjct: 335 LAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFKAMRRHRVEPDLCSYTTMVLA 394
Query: 242 YLRNGDMKLAVDCLEKAIDTG 262
Y+ DM A + D G
Sbjct: 395 YVNASDMNGAEKFFRRIKDDG 415
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 95 FSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
F L + Y + G F +AER LK + + + + L+ YG+ + ++R ++
Sbjct: 143 FLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQ 202
Query: 155 LAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATY---DIRVTNVMIGAYAKEG 211
+ P + ++Y +++ LV AE F++ + T D ++ ++MI Y K G
Sbjct: 203 TSGPEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAG 262
Query: 212 RLENAEEL 219
A +L
Sbjct: 263 DYAQARKL 270
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ M I+ D YN+ AL + +S + ++MK +G + D T++ + S Y
Sbjct: 357 LLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNG-IIPDVFTYNIMISSY 415
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
GL +KA + +E + D+ Y LI G+ G+L E + +++ ++ +
Sbjct: 416 GRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDV 475
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+Y +I+ + A F E S T +I N+++ + G+ E A +L E
Sbjct: 476 FTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYET 535
Query: 223 ARRRGADPNAKTWEIF 238
+++G P++ T+ I
Sbjct: 536 MKQQGLIPDSITYSIL 551
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +KMK + +N +++ Y + G +K + + M+ASS PD TYN + L
Sbjct: 392 LFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLG 451
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
D+ A + +EM+ G D T+S L + ++ E A E+ + ++
Sbjct: 452 KHGDLDEAHMLFKEMQEKG-YDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNI 510
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLR 154
Y L+ + G E ++++ +++
Sbjct: 511 VTYNILLDCLERRGKTEEAHKLYETMK 537
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/358 (18%), Positives = 131/358 (36%), Gaps = 45/358 (12%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
K + E+M+ +N L+ AK G ++ + ++MK +PD+YTY +
Sbjct: 144 VSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTI 203
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRV--------------------------------- 88
+R S +EM G V
Sbjct: 204 LIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEND 263
Query: 89 -AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
+ T+S I G + L ++ +R +R S Y +L+ ++G+ SE +
Sbjct: 264 CQPNQFTYSITLDILATEGQLHRLNEVL-DICSRFMNR--SIYSYLVKSLCKSGHASEAH 320
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNL-KDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
++ + + ++++M++VL N K L + E G T D+ + N++ A
Sbjct: 321 NVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVT-DVGMYNMVFSA 379
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
K ++ L ++ + G P+ T+ I Y R G + A + E +
Sbjct: 380 LGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM------EA 433
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
P T + + + D+D A + +++ D V + LI + + +
Sbjct: 434 SSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKV 491
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/331 (16%), Positives = 125/331 (37%), Gaps = 37/331 (11%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T K + ++M + + FN+++ K +K+ ++ +M + P+ +TY++
Sbjct: 214 TSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSI 273
Query: 62 WMRALAA---------VNDI-------SGAERVIEEMKRDGRVA---------------A 90
+ LA V DI S +++ + + G +
Sbjct: 274 TLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKG 333
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
D F ++ + A +A L + + D+ Y + + G+ +S + ++
Sbjct: 334 DRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLF 393
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
++ +Y MI + + A + F+ E+ D+ N +I K
Sbjct: 394 DKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKH 453
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
G L+ A L + + +G DP+ T+ I + + ++ +++A ++ I G
Sbjct: 454 GDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEG------CT 507
Query: 271 PSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
P+ T + E+ + A E +K+
Sbjct: 508 PNIVTYNILLDCLERRGKTEEAHKLYETMKQ 538
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA L E M+ + + +NSL+ K G ++ + +EM+ PD +TY+
Sbjct: 420 LVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYS 479
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + N + A + +EM +G + T++ L G E+A + + ++
Sbjct: 480 ILIECFGKSNKVEMACSLFDEMISEG-CTPNIVTYNILLDCLERRGKTEEAHKLYETMKQ 538
Query: 121 RNAHRDLSAYQFL 133
+ D Y L
Sbjct: 539 QGLIPDSITYSIL 551
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 9/248 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
++++ + +++ L S + FN+LM Y + G +K + M AS + PD YTY+V +
Sbjct: 155 SQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + EM G V + TF+ L + + G + A K++ +++
Sbjct: 215 GLCKESKMDEANELFXEMLDKGLV-PNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + I+Y +I DL A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAF-- 331
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E+ +IR+ +V +I +EGR +AE++ G P++ T+ + +
Sbjct: 332 --EYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIIN 389
Query: 241 YYLRNGDM 248
+ + GD+
Sbjct: 390 EFCKKGDV 397
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 1/187 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L +M + L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 223 DEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I EM G + D T++ L + G E A K + N
Sbjct: 283 IYGLCKKGDLKQARNLINEMSMKG-LKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G + ++ R + + +Y +I D+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGS 401
Query: 183 KCFKEWE 189
K KE +
Sbjct: 402 KLLKEMQ 408
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 86/206 (41%), Gaps = 5/206 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M +I ++ V + +++ G + +F+ L + Y+ G +K R
Sbjct: 137 YFFNILMHRFCKEGEIRLSQSVFDAIRKWG-LRPSVVSFNTLMNGYIRQGDLDKGFRLKS 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
+ D+ Y LI + + E ++ + + PN +++ +I
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ A L +G P+ T
Sbjct: 254 NGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAID 260
+ D ++GD++ A + ++ I+
Sbjct: 314 YTTLIDGSCKDGDLETAFEYRKRMIE 339
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 42/81 (51%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAV 69
++M E N+ + + +L++ + G +++EM + + PDS TY + +
Sbjct: 335 KRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKK 394
Query: 70 NDISGAERVIEEMKRDGRVAA 90
D+ ++++EM+RDG V +
Sbjct: 395 GDVWTGSKLLKEMQRDGHVPS 415
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 3/259 (1%)
Query: 3 EKAEALLEKMKEL-NLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
EK L+KMK + + + +N L+ +A++G +++ A+ +++ S + PD YT+N
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
M A I E V+ M R D TF+ L Y + FEK E+ K L
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
L + +I YG+ + + +++ + + I+Y MI + + A
Sbjct: 308 KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRA 367
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
+ F+E N M+ Y + G A++L A P+A T++
Sbjct: 368 REIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 427
Query: 242 YLRNGDMKLAVDCLEKAID 260
Y + DMK V L K ++
Sbjct: 428 YTK-ADMKEQVQILMKKME 445
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 4/244 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA-ERV---I 79
++ L+++ K G + EMK S PD+ YN + A D + A E+V +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQ 139
++MK R + T++ L + ++G ++ K+L+ D+ + ++ YG+
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 140 TGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
G + E+ + +R I++ +I ++ E+ FK +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
N MI Y K ++ AE + ++ P+ T+E Y G + A + E+
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVG 375
Query: 260 DTGR 263
++ R
Sbjct: 376 ESDR 379
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 91/242 (37%), Gaps = 15/242 (6%)
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
D +S L S+ + G A E++N D S Y LIT + T + ++
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 151 R-------SLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
R + PN ++Y +++ + FK+ + + D+ N +
Sbjct: 192 RGYLDKMKGIERCQPNV--VTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
+ AY K G ++ E + R R P+ T+ + D Y + + + + + +
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS-- 307
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGR 323
K P+ T + + ++ + + +D AE + + +E +I Y G
Sbjct: 308 ----KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 324 TS 325
S
Sbjct: 364 VS 365
>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
pusilla]
Length = 381
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 1/239 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+++L+ L K K +I +K S PD YN + A +I EMK
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 67
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T++S L ++YVE F +A E+ DL+ +I +YGQ G
Sbjct: 68 TAG-VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMA 126
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E +++ +R +SY +++V + + A F+ + ++ N M
Sbjct: 127 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 186
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ Y K E A L + + RG +PN+ T+ + + G + A +K TG
Sbjct: 187 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTG 245
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM++ I P+S TY+ +
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 222
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D F + Y AGL A+R L EL+ N
Sbjct: 223 SIWGKVGKLDRAAMLFQKLRSTG-VEIDQILFQTMIVXYERAGLIAHAKRLLHELKRPDN 281
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI +L K
Sbjct: 282 IPRDTA-----IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANVV 336
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + D V V++ AY K + A ++
Sbjct: 337 EVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDV 373
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q+++++ + D +
Sbjct: 197 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTM 256
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ I+ A+R++ E+KR + D T LA AG E+A ++ +
Sbjct: 257 IVXYERAGLIAHAKRLLHELKRPDNIPRD-TAIHILAG----AGRIEEATYVFRQAIDAG 311
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + N+ EV+ R L FP++ N+I V++N L
Sbjct: 312 EVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGY-FPDS------NVIAVVLNAYGKL 364
Query: 176 KDLPGAEKCFKEWE 189
++ A + E +
Sbjct: 365 QEFDKANDVYMEMQ 378
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 7/165 (4%)
Query: 88 VAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
V D +SNL + + + KA L+ DL AY +I ++G+ E
Sbjct: 1 VPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREAR 60
Query: 148 RIWRSLRLA--FPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
+ ++ A PNT SY ++ + V K A F E D+ N+MI
Sbjct: 61 SLISEMKTAGVMPNTT--SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMID 118
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKL 250
Y + G + A++L R+ G +PN ++ Y GD +L
Sbjct: 119 VYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVY---GDAEL 160
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 157 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLIN 216
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + TF+ L + + G + A K + +++
Sbjct: 217 GLCKESKMDDANELFDEMLVKGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLL 275
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A +
Sbjct: 276 PDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEH 335
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I +EGR +AE++ G PN +T+ + + + +
Sbjct: 336 RKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCK 395
Query: 245 NGDM 248
GD+
Sbjct: 396 KGDV 399
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L + + F +L+ + K G + I + M + S++PD TYN
Sbjct: 225 DDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTL 284
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM G + D T++ L + G + A K + N
Sbjct: 285 IYGLCKKGDLKQAHHLIDEMSMKG-LKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 343
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G RS+ AE
Sbjct: 344 IXLDDVAYTALISGLCQEG---------RSV--------------------------DAE 368
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K +E S + R ++I + K+G + +L + +R G P+ T+ +
Sbjct: 369 KMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 424
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 76/197 (38%), Gaps = 1/197 (0%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + + G + +++ L + Y+ G ++ R
Sbjct: 139 YFFNILMHRFCKDGDIRVAQSVFDAITKWG-LRPSVVSYNTLMNGYIRLGDLDEGFRLKS 197
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ D+ Y LI + + + ++ + + +++ +I
Sbjct: 198 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 257
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ A + +K S D+ N +I K+G L+ A L + +G P+ T+
Sbjct: 258 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYT 317
Query: 237 IFSDYYLRNGDMKLAVD 253
D + GD+ A +
Sbjct: 318 TLIDGCCKEGDLDTAFE 334
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%)
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+SY ++ + L DL + + D+ +V+I KE ++++A EL +
Sbjct: 174 VSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 233
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
+G PN T+ D + +NG + LA++ ++ +
Sbjct: 234 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRML 270
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 36/268 (13%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +LL+KM++ + + +N+++ K H + A+ +M+ I PD +TYN +
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L S A R++ M + ++ + TFS L +V+ G +AE+ E+ R+
Sbjct: 299 CLCNYGRWSDASRLLSNMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN-------------------- 162
D+ Y LI + L E ++ + + FPN
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 163 -------------ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAK 209
++Y +IQ L D A+K FK+ S DI ++++ K
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 210 EGRLENAEELKERARRRGADPNAKTWEI 237
G+LE A + E ++ +P+ T+ I
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 133/318 (41%), Gaps = 20/318 (6%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMT-LYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
A AL+++M E+ ++ FN+L+ L+ E + A++ +M PD TY +
Sbjct: 169 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGAVV 227
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L DI A ++++M++ G++ AD ++ + + + A ++E +
Sbjct: 228 NGLCKRGDIDLALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI 286
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGA 181
D+ Y LI+ G S+ R+ ++ R PN S L I V L A
Sbjct: 287 RPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSAL--IDAFVKEGKLVEA 344
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDY 241
EK + E DI + +I + RL+ A+ + E + PN T+
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 242 YLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
+ + ++ ++ + G V ++ T T ++ Q D D A+ +I KK
Sbjct: 405 FCKAKRVEEGMELFREMSQRG------LVGNTVTYNTLIQGLFQAGDCDMAQ---KIFKK 455
Query: 302 AVDDLGVEVFEPLIRTYA 319
V D GV P I TY+
Sbjct: 456 MVSD-GV---PPDIITYS 469
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 124/300 (41%), Gaps = 8/300 (2%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A A+L KM +L + +SL+ Y + A++ +M PD+ T+N +
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIH 193
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L N S A ++++M + G D T+ + + + G + A LK++E
Sbjct: 194 GLFLHNKASEAVALVDQMVQRG-CQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D+ Y +I + ++ + + ++ + +Y ++I L N A +
Sbjct: 253 ADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRL 312
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
++ + +I A+ KEG+L AE+L + +R DP+ T+ + +
Sbjct: 313 LSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 245 NGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDV-DGAEGFLEILKKAV 303
+ + A E I P+ T T ++ F + K V +G E F E+ ++ +
Sbjct: 373 HDRLDEAKHMFELMISK------DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 126/344 (36%), Gaps = 50/344 (14%)
Query: 20 SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVI 79
S + FN L++ AK + + ++ + M+ I D Y+YN+ + + + A V+
Sbjct: 79 SIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 80 EEMKRDGRVAADWTTFSNLASIYVEA------------------------------GLF- 108
+M + G D T S+L + Y + GLF
Sbjct: 139 GKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 109 -EKAERA---LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 164
KA A + ++ R DL Y ++ + G++ + + + +
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 165 YLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERAR 224
Y +I L K + A F + E+ D+ N +I GR +A L
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 225 RRGADPNAKTWEIFSDYYLRNGDM----KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFM 280
R +PN T+ D +++ G + KL + ++++ID P T + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID----------PDIFTYSSLI 367
Query: 281 RHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
F +D A+ E++ V + LI+ + A R
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ ++++ + + G E+ A+ +EMK +PDS YN +RA D + + +I+EM+
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMR 597
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKA 111
G V D +T S + ++ + G EK+
Sbjct: 598 SCGFV-GDASTISMVINM-LHDGRLEKS 623
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 107/239 (44%), Gaps = 4/239 (1%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ + G E + EM + PD TY + + A+ ++ A +++++M
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMV 321
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G V + T ++++ ++ + G A ++++ + D + Y +++ + G+L
Sbjct: 322 ARG-VEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDL 380
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
R + ++ T ++Y +I L +L AEK +E + D V+
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVL 440
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+ Y K G++ A ++ +RG PN T+ SD + GD++ A + L + + G
Sbjct: 441 VDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 1/241 (0%)
Query: 9 LEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAA 68
++M+ L + + +L+ + G ++ ++QEM A + D TY V +
Sbjct: 387 FDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCK 446
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
++ A +V M + G VA + T++ L+ + G + A L E+ N+ +
Sbjct: 447 RGKMAEAFQVHNTMVQRG-VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW 188
Y LI + G L + R + A +Y +I L +L A +E
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565
Query: 189 ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDM 248
I NV++ + GR+E ++L E + PNA T+ Y +M
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625
Query: 249 K 249
K
Sbjct: 626 K 626
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A LL +M L ++ +NSL+ K G+ ++ + +M A+ + PD YTY
Sbjct: 486 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTL 545
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ AL ++ A +++EM +G + T++ L + + +G E ++ L+ + +N
Sbjct: 546 IDALCKSGELDRAHDLLQEMLDNG-IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
H + + Y L+ Y N+ I++ +
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGM 635
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 135/321 (42%), Gaps = 7/321 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ E+A + E+MK + +N+L+ +Y K+ P + +++EM+AS P TYN
Sbjct: 306 LYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYN 365
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A A + A + +M + G + D T++ L S + + G + A + +E+
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKG-IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRV 424
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
++ + LI ++G GN E+ +++ +++ +++ ++ V
Sbjct: 425 AGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSE 484
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
FKE + + N +I AY++ G + A + R G P+ T+
Sbjct: 485 VSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLA 544
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
R G + + L + D G+ P+ T + + + K+V+ E +
Sbjct: 545 ALARGGLWEQSEKVLAEMKD------GRCKPNELTYCSLLHAYANGKEVERMSALAEEIY 598
Query: 301 KAVDDLGVEVFEPLIRTYAAA 321
+ + + + L+ Y+ +
Sbjct: 599 SGIIEPQAVLLKTLVLVYSKS 619
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 135/335 (40%), Gaps = 42/335 (12%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M + + ++MK FN+L++ Y++ G ++ AI + M + + PD TYN
Sbjct: 481 MDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYN 540
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLAS-------------------- 100
+ ALA +E+V+ EMK DGR + T+ +L
Sbjct: 541 AVLAALARGGLWEQSEKVLAEMK-DGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYS 599
Query: 101 ---------------IYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
+Y ++ L + ERA EL + D++ ++++YG+ +S+
Sbjct: 600 GIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSK 659
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
I ++ + + +Y +++ + + +E +E + DI N +I
Sbjct: 660 TNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIF 719
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
AY + GR++ A + + G P+ T+ F Y + A+D ++ I
Sbjct: 720 AYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIK----- 774
Query: 266 GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ P+ T + + F + D A F+ L+
Sbjct: 775 -NECKPNQNTYNSLIDWFCKLNRRDEANSFISNLR 808
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K L++ MK + +N+L++ + E+ + +EMKA+ PD TYN +
Sbjct: 274 KIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALL 333
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
A V++EM+ G A T+++L S Y GL ++A ++ +
Sbjct: 334 DVYGKSRRPREAMEVLKEMEASG-FAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGI 392
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y L++ + +TG +++ +R+A ++ +I++ N + K
Sbjct: 393 KPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMK 452
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
F+E + DI N ++ + + G + + +R G P T+ Y
Sbjct: 453 VFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYS 512
Query: 244 RNGDMKLAVDCLEKAIDTG 262
R G A+ + +D G
Sbjct: 513 RCGFFDQAMAIYRRMLDAG 531
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 43/257 (16%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A +LL ++ + + SL+T YA G + + ++++ P TYNV +
Sbjct: 204 AASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILN 263
Query: 65 ALAAV----NDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + I+G +++ MK G VA D T++ L S L+E+A +E++
Sbjct: 264 VYGKMGMPWSKIAG---LVDSMKSSG-VAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKA 319
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D Y L+ +YG++ E
Sbjct: 320 AGFSPDKVTYNALLDVYGKSRRPRE----------------------------------- 344
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A + KE E+ I N +I AYA++G L+ A ELK + ++G P+ T+
Sbjct: 345 AMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLS 404
Query: 241 YYLRNGDMKLAVDCLEK 257
+ + G A+ E+
Sbjct: 405 GFEKTGKDDYAMKVFEE 421
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 127/336 (37%), Gaps = 25/336 (7%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
K LEKM+E + +N+L+ Y + G E + + M +MPD +Y
Sbjct: 272 VNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTS 331
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
MR L + + A ++ M G + D ++ L Y + G+ ++A L E+
Sbjct: 332 LMRGLCRLGRVREAHQLFHRMIDRG-MDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGI 390
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
H D + L+ YG+ G L + ++ A+ Y +I L +D P A
Sbjct: 391 GIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCR-EDRPFA 449
Query: 182 EKCFKE--WESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
K E E D + N +I ++ + + A LK R P T+
Sbjct: 450 AKSLLERILEDSFQP-DSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTY---- 504
Query: 240 DYYLRNGDMKLAVDCLEKAIDTGRGDG-------GKWVPSSETIRTFMRHFEQEKDVDGA 292
K + C+ + + G+G + +P E R + + +E + D A
Sbjct: 505 ---------KSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKA 555
Query: 293 EGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 328
E L K E F L++ Y G + +M
Sbjct: 556 ESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLM 591
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 14/312 (4%)
Query: 45 QEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVE 104
++M +P+ N + LA + + + EEM R G V ++ TF+ L +
Sbjct: 210 KKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIG-VHSNAYTFNILTYVLCR 268
Query: 105 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTAN 162
G K L+++E D+ Y LI Y + G L + + +++ + R P+
Sbjct: 269 DGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDL-- 326
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+SY ++++ L L + A + F D+ + N +IGAY K+G L+ A L
Sbjct: 327 VSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHE 386
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
G P++ T I + Y R G + A++ + + G + + + +
Sbjct: 387 MIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLG------VTVAHDIYKYLIIS 440
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKM---EKVEV 339
+E A+ LE + + +++ LI ++ + S +L +L+M
Sbjct: 441 LCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPT 500
Query: 340 SEASKKLLEAIC 351
++ K L+ +C
Sbjct: 501 TDTYKSLIHCMC 512
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + +L S + FN+LM Y K G ++ + M+AS + PD YTY+V +
Sbjct: 155 AQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM D + + TF+ L + + G + A K++ +++
Sbjct: 215 GLCKESKMDDANELFDEM-LDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + I+Y +I DL A K
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKY 333
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I +EGR +AE++ G P T+ + + + +
Sbjct: 334 RKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCK 393
Query: 245 NGDM 248
GD+
Sbjct: 394 KGDV 397
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M + L + + F +L+ + K G + I ++M + S+ PD TYN
Sbjct: 223 DDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A+ +I+EM G + D T++ L + G E A + K + N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKG-LKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D AY LI+ Q G + ++ R +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/197 (18%), Positives = 83/197 (42%), Gaps = 5/197 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M + +I A+ V + + + + +F+ L + Y++ G ++ R
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITK-WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKN 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
++ D+ Y LI + + + ++ + PN +++ +I
Sbjct: 196 AMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S + D+ N +I K+G L+ A++L + +G P+ T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLA 251
+ D + GD++ A
Sbjct: 314 YTTLIDGNCKEGDLETA 330
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 1/236 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L +M + L + + F +L+ + TG + I Q+M + PD TYN
Sbjct: 312 DDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTL 371
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L V D+ A++++ EM + G + D T++ L + G E A KE+
Sbjct: 372 INGLCKVGDLREAKKLVIEMTQRG-LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D A+ LI+ + + G + E R R + A + +Y +I D+
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGF 490
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
K KE + + NV++ K+G+++NA L + G P+ T+ I
Sbjct: 491 KLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL 546
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 125/305 (40%), Gaps = 11/305 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A+ L ++ + L + + FN+L+ Y K+G+ ++ + + M + + PD +TY+V +
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L + A ++ EM G V D TF+ L + + G + +++ +
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPND-VTFTTLINGHCVTGRADLGMEIYQQMLRKGV 361
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D+ Y LI + G+L E ++ + +Y +I DL A +
Sbjct: 362 KPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALE 421
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
KE D +I + +EG++ AE G P+ T+ + +
Sbjct: 422 IRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFC 481
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
+ GD+K L++ + DG VP T + ++ + A L+ A+
Sbjct: 482 KKGDVKTGFKLLKEM----QCDG--HVPGVVTYNVLLNGLCKQGQMKNANMLLD----AM 531
Query: 304 DDLGV 308
+LGV
Sbjct: 532 LNLGV 536
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 5/223 (2%)
Query: 42 AIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASI 101
A +E+ PD +NV M L + I+ A+ + E+ + G + +F+ L +
Sbjct: 211 AFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG-LRPTVVSFNTLING 269
Query: 102 YVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPN 159
Y ++G ++ R + + D+ Y LI + G L + +++ + R PN
Sbjct: 270 YCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN 329
Query: 160 TANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ L + DL G E + G D+ N +I K G L A++L
Sbjct: 330 DVTFTTLINGHCVTGRADL-GMEIYQQMLRKG-VKPDVITYNTLINGLCKVGDLREAKKL 387
Query: 220 KERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
+RG P+ T+ + D + GD++ A++ ++ + G
Sbjct: 388 VIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + +N+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 143 AQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 202
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + +EM G V + TF+ L + + G + A K++ +++
Sbjct: 203 GLCKESKMDDANELFDEMLVKGLV-PNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLL 261
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + + I+Y +I DL A +
Sbjct: 262 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEH 321
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I +EGR +AE++ G P+A+T+ + + + +
Sbjct: 322 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCK 381
Query: 245 NGDM 248
GD+
Sbjct: 382 KGDV 385
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A L ++M L + + F +L+ + K G + I ++M + S++PD TYN
Sbjct: 211 DDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTL 270
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM G + D T++ L + G + A K + N
Sbjct: 271 IYGLCKKGDLKQAHDLIDEMSMKG-LKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQEN 329
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
D AY LI+ Q G + ++ R +
Sbjct: 330 IRLDDVAYTALISGLCQEGRSVDAEKMLREM 360
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M DI A+ V + + + G + +++ L + Y+ G ++ R
Sbjct: 125 YFFNILMHRFCKERDIRVAQSVFDAITKWG-LRPSVVSYNTLMNGYIRLGDLDEGFRLKS 183
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLK 176
+ D+ Y LI + + + ++ + + +++ +I
Sbjct: 184 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNG 243
Query: 177 DLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE 236
+ A + +K+ S D+ N +I K+G L+ A +L + +G P+ T+
Sbjct: 244 RVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 303
Query: 237 IFSDYYLRNGDMKLAVD 253
D + GD+ A +
Sbjct: 304 ALIDGCCKEGDLDTAFE 320
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+SY ++ + L DL + + D+ +V+I KE ++++A EL +
Sbjct: 160 VSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 219
Query: 223 ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRH 282
+G PN T+ D + +NG + LA++ ++ + +P T T +
Sbjct: 220 MLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQS------LLPDLITYNTLIYG 273
Query: 283 FEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAA 320
++ D+ A +D++ ++ +P TY A
Sbjct: 274 LCKKGDLKQAHDL-------IDEMSMKGLKPDKITYTA 304
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 8/252 (3%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
+EKA + ++MK+ ++ + ++ +Y K P + EMK P+ TY
Sbjct: 251 SEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTA 310
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ A A AE V EEM++ G D ++ L Y AGL + A +E+
Sbjct: 311 LVNAFAREGLCEKAEEVFEEMQQAGH-EPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 369
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
D ++Y L+ YG+ G E ++ L+ S++ ++ ++
Sbjct: 370 GCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARC 429
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARR-------RGADPNAKT 234
E+ + D N M+ AY + GRL++ E L R GA P+ T
Sbjct: 430 EEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTST 489
Query: 235 WEIFSDYYLRNG 246
+ + + Y R G
Sbjct: 490 YNVLVNVYGRAG 501
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 14/301 (4%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
+ +MK + + + +L+ +A+ G EK + +EM+ + PD Y YN M A +
Sbjct: 292 VFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYS 351
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
GA + M+ G D +++ L Y AGL ++AE A +EL+ + +
Sbjct: 352 RAGLPQGASEIFSLMEHMG-CEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTM 410
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLRLA------FPNTANISYLNMIQVLVNLKDLPGA 181
++ L++ + ++GN++ + L + F A ++ L +++ L GA
Sbjct: 411 KSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGA 470
Query: 182 -EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E+ + G A D NV++ Y + G L+ E RG + TW
Sbjct: 471 MERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIG 530
Query: 241 YYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
Y R + ++ E+ +D G P + T + + E+ V+ + +
Sbjct: 531 AYARKKEYGRCLEIFEEMVDAG------CYPDAGTAKVLLAACSDERQVEQVTAIVRSMH 584
Query: 301 K 301
K
Sbjct: 585 K 585
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 92/223 (41%), Gaps = 1/223 (0%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+N L+ Y + K +I + + +P TY + +RA + AE VI EM+
Sbjct: 168 YNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQ 227
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
++G + T ++ ++A EKA + ++ + Y +I +YG+
Sbjct: 228 KNG-LPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQP 286
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
+++ ++ +Y ++ AE+ F+E + D+ N +
Sbjct: 287 MSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNAL 346
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
+ AY++ G + A E+ G +P+ ++ I D Y R G
Sbjct: 347 MEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAG 389
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 104/251 (41%), Gaps = 20/251 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ EKAE + E+M++ +N+LM Y++ G P+ I M+ PD +YN
Sbjct: 320 LCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYN 379
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + A AE +E+K+ G + + L S + ++G + E + +L
Sbjct: 380 ILVDAYGRAGLHQEAEAAFQELKQQG-MRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHK 438
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR---------LAFPNTANISYLNMIQV 171
D A ++ YG+ G L ++ R+ ++ A P+T+ + V
Sbjct: 439 SGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYN------V 492
Query: 172 LVNLKDLPG----AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
LVN+ G E F+ + D+ IGAYA++ E+ E G
Sbjct: 493 LVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAG 552
Query: 228 ADPNAKTWEIF 238
P+A T ++
Sbjct: 553 CYPDAGTAKVL 563
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 107/246 (43%), Gaps = 3/246 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
KAE++ + E + + + L+ Y +G + +I EM+ + + P + YN ++
Sbjct: 183 KAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYL 242
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L A V + MK++ R + T++ + ++Y +A + + E++
Sbjct: 243 DGLLKARCSEKAVEVYQRMKKE-RCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGC 301
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP-GAE 182
++ Y L+ + + G + ++ ++ A + ++ N + + LP GA
Sbjct: 302 KPNICTYTALVNAFAREGLCEKAEEVFEEMQQA-GHEPDVYAYNALMEAYSRAGLPQGAS 360
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ F E D N+++ AY + G + AE + +++G P K+ + +
Sbjct: 361 EIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAH 420
Query: 243 LRNGDM 248
++G++
Sbjct: 421 AKSGNV 426
>gi|296424573|ref|XP_002841822.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638071|emb|CAZ86013.1| unnamed protein product [Tuber melanosporum]
Length = 1048
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 2/242 (0%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+PFNSLM YA+ G ++ + ++PD+Y+YN+ + A A D+ G R ++E
Sbjct: 490 LPFNSLMFAYARRGELGEVVKCFDAIPKFGLVPDNYSYNILINAYAKAQDVDGVLRRVQE 549
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
M +A D T+ L ++ + G E +R + Y L+ Y G
Sbjct: 550 MIA-AELAPDTYTYGVLMTLAADRGDVENTKRYFNLAVDSGVEPTEPMYLALMASYVTVG 608
Query: 142 NLSEVYRIWRSLRLAFPNTANISYLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVT 200
+L + SL A P N ++ L D + +D
Sbjct: 609 DLESAGHLLESLVQAEPRRDTTVLWNELLSSYAVLCDPERLNMTYHRMREAMVGFDQYTY 668
Query: 201 NVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
+++ A G++E AE++ + G PN+ + I ++RN D+ K ++
Sbjct: 669 AILMHALCLIGKVETAEQVLDSLGAEGIKPNSIHYAIIMVAHMRNMDLAQVWATFNKMVN 728
Query: 261 TG 262
G
Sbjct: 729 CG 730
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 91/234 (38%), Gaps = 1/234 (0%)
Query: 26 SLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRD 85
+L+ LY + + + ++ + I P+S+ +N +RA + D G + V ++
Sbjct: 389 ALIQLYREKRDADAVKIYLEFREIPVIKPNSHLFNGALRAFRNLLDFRGMQMVFDDWFTT 448
Query: 86 GRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSE 145
G D + L S G + L + R +L + L+ Y + G L E
Sbjct: 449 GS-QPDKQAYYILISEMARHGEARVVKELLDQFLERFDPEELLPFNSLMFAYARRGELGE 507
Query: 146 VYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIG 205
V + + ++ N SY +I +D+ G + +E + D V++
Sbjct: 508 VVKCFDAIPKFGLVPDNYSYNILINAYAKAQDVDGVLRRVQEMIAAELAPDTYTYGVLMT 567
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
A G +EN + A G +P + Y+ GD++ A LE +
Sbjct: 568 LAADRGDVENTKRYFNLAVDSGVEPTEPMYLALMASYVTVGDLESAGHLLESLV 621
>gi|224169626|ref|XP_002339288.1| predicted protein [Populus trichocarpa]
gi|222874812|gb|EEF11943.1| predicted protein [Populus trichocarpa]
Length = 140
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 209 KEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGK 268
+EG +E E L +RA G DPNAKTW F YLRNG A++ ++K + G +
Sbjct: 14 QEGLVEKVETLIDRAISIGGDPNAKTWYHFETGYLRNGQTLKAMEAMKKEVVVS---GRR 70
Query: 269 WVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRTSPVM 328
W PS+E++ T + + ++E D++ + F+E+L++ D + +++ E L+ +S V+
Sbjct: 71 WKPSNESLATCLEYLKEEGDLEKVKDFMELLRRN-DIISLDIQERLLNHIKDTDSSSDVL 129
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ M I+ D YN+ AL + +S + ++MK +G + D T++ + S Y
Sbjct: 357 LLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNG-IIPDVFTYNIMISSY 415
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
GL +KA + +E + D+ Y LI G+ G+L E + +++ ++ +
Sbjct: 416 GRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDV 475
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+Y +I+ + A F E S T +I N+++ + G+ E A +L E
Sbjct: 476 FTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYET 535
Query: 223 ARRRGADPNAKTWEIF 238
+++G P++ T+ I
Sbjct: 536 MKQQGLIPDSITYSIL 551
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +KMK + +N +++ Y + G +K + + M+ASS PD TYN + L
Sbjct: 392 LFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLG 451
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
D+ A + +EM+ G D T+S L + ++ E A E+ + ++
Sbjct: 452 KHGDLDEAHMLFKEMQEKG-YDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNI 510
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLR 154
Y L+ + G E ++++ +++
Sbjct: 511 VTYNILLDCLERRGKTEEAHKLYETMK 537
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/358 (18%), Positives = 131/358 (36%), Gaps = 45/358 (12%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
K + E+M+ +N L+ AK G ++ + ++MK +PD+YTY +
Sbjct: 144 VSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTI 203
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRV--------------------------------- 88
+R S +EM G V
Sbjct: 204 LIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEND 263
Query: 89 -AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
+ T+S I G + L ++ +R +R S Y +L+ ++G+ SE +
Sbjct: 264 CQPNQFTYSITLDILATEGQLHRLNEVL-DICSRFMNR--SIYSYLVKSLCKSGHASEAH 320
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNL-KDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
++ + + ++++M++VL N K L + E G T D+ + N++ A
Sbjct: 321 NVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVT-DVGMYNMVFSA 379
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
K ++ L ++ + G P+ T+ I Y R G + A + E +
Sbjct: 380 LGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM------EA 433
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
P T + + + D+D A + +++ D V + LI + + +
Sbjct: 434 SSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKV 491
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/331 (16%), Positives = 125/331 (37%), Gaps = 37/331 (11%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T K + ++M + + FN+++ K +K+ ++ +M + P+ +TY++
Sbjct: 214 TSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSI 273
Query: 62 WMRALAA---------VNDI-------SGAERVIEEMKRDGRVA---------------A 90
+ LA V DI S +++ + + G +
Sbjct: 274 TLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKG 333
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
D F ++ + A +A L + + D+ Y + + G+ +S + ++
Sbjct: 334 DRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLF 393
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
++ +Y MI + + A + F+ E+ D+ N +I K
Sbjct: 394 DKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKH 453
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
G L+ A L + + +G DP+ T+ I + + ++ +++A ++ I G
Sbjct: 454 GDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEG------CT 507
Query: 271 PSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
P+ T + E+ + A E +K+
Sbjct: 508 PNIVTYNILLDCLERRGKTEEAHKLYETMKQ 538
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA L E M+ + + +NSL+ K G ++ + +EM+ PD +TY+
Sbjct: 420 LVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYS 479
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + N + A + +EM +G + T++ L G E+A + + ++
Sbjct: 480 ILIECFGKSNKVEMACSLFDEMISEG-CTPNIVTYNILLDCLERRGKTEEAHKLYETMKQ 538
Query: 121 RNAHRDLSAYQFL 133
+ D Y L
Sbjct: 539 QGLIPDSITYSIL 551
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 9/257 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + FN+LM Y + G ++ + M AS + PD YTY+V +
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + ++ A + EM G V + TF+ L + + G + A K++ ++
Sbjct: 215 GLCKESKMNEANDLFNEMLDKGLV-PNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFL 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + +R+ I+Y +I DL A
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAF-- 331
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E IR+ +V +I +EGR +AE++ G P+ T+ + +
Sbjct: 332 --ELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIIN 389
Query: 241 YYLRNGDMKLAVDCLEK 257
+ + D+K A L++
Sbjct: 390 EFCKKEDVKTAAKLLKE 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 86/205 (41%), Gaps = 5/205 (2%)
Query: 57 YTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALK 116
Y +N+ M +I A+ V + + + G + +F+ L + Y+ G ++ +
Sbjct: 137 YFFNILMHRFCKEGEIWIAQSVFDSITKWG-LRPSVVSFNTLMNGYIRLGDLDQGFKLKN 195
Query: 117 ELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVN 174
+ D+ Y LI + ++E ++ + + PN +++ +I
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPN--GVTFTTLIDGHCK 253
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ A + +K+ S C D+ N +I K+G L+ A++L + R +G P+ T
Sbjct: 254 NGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKIT 313
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAI 259
+ D + GD+ A + E +
Sbjct: 314 YTTLIDGNCKEGDLDSAFELRETMV 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L +M + L + + F +L+ + K G + ++M + +PD TYN +
Sbjct: 224 EANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLI 283
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
L D+ A+ +++EM+ G + D T++ L + G + A + + +
Sbjct: 284 YGLCKKGDLKQAQDLLDEMRMKG-LKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESI 342
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D AY LI+ Q G ++ ++ R + N +Y +I +D+ A K
Sbjct: 343 RLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAK 402
Query: 184 CFKEWE 189
KE +
Sbjct: 403 LLKEMQ 408
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ ++ I D+ YN + AL + S + E+MK+DG + D +++ L S +
Sbjct: 488 LLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGP-SPDIFSYNILISSF 546
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
AG E+A + +ELEN + D+ ++ LI G+ G++ E + ++ +R +
Sbjct: 547 GRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDV 606
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
++Y +I+ + A + F E + + +I N+++ + GR A +L +
Sbjct: 607 VTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAK 666
Query: 223 ARRRGADPNAKTWEIF 238
+++G P++ T+ +
Sbjct: 667 LKQQGLTPDSITYAVL 682
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 1/164 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T L EKMK+ +N L++ + + G E+ I +E++ SS PD ++N
Sbjct: 517 TSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNS 576
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ L DI A +EM+ +G ++ D T+S L + + E A R E+
Sbjct: 577 LINCLGKNGDIDEAHMRFKEMREEG-LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAE 635
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISY 165
++ Y L+ ++G +E ++ L+ +I+Y
Sbjct: 636 GCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITY 679
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/248 (17%), Positives = 104/248 (41%), Gaps = 6/248 (2%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+++ L ++M E + + +N+++ A +K + +M ++ P+ +T++V
Sbjct: 344 DESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVI 403
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L A + + V+E + + + ++ L + G +A R L + +
Sbjct: 404 LNVLVAEGQLGRLDEVVEVSNK----FMNKSIYAYLVRTLSKLGHASEAHRLLHLQYDWS 459
Query: 123 AHR--DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
H D AY ++ G +E + + +T + Y ++ L LK
Sbjct: 460 FHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSD 519
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
+++ + + DI N++I ++ + GR+E A ++ E P+ ++ +
Sbjct: 520 LHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLIN 579
Query: 241 YYLRNGDM 248
+NGD+
Sbjct: 580 CLGKNGDI 587
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM+E + + +++L+ L K + +I +K S I PD YN
Sbjct: 24 LFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIFSRLKRSGIAPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A ++ EM+ G V D ++ L ++YVE F +A E+
Sbjct: 84 SMINVFGKAKLFREARALVSEMRTAG-VMPDTVSYCTLLTMYVENQKFLEALSLFSEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ S+R +SY +++V + +
Sbjct: 143 IQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PNA T+
Sbjct: 203 AIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEK 257
+ + G + A +K
Sbjct: 263 IWGKVGKLDRAAMLFQK 279
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 4/200 (2%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M+ D RV D +SNL + + + +
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEED-RVPGDLVLYSNLIELSRKLCDYSR 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQ 170
A L+ DL AY +I ++G+ E + +R A +SY ++
Sbjct: 63 AISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLT 122
Query: 171 VLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADP 230
+ V + A F E ++D+ N+MI Y + G + A++L R+ G +P
Sbjct: 123 MYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEP 182
Query: 231 NAKTWEIFSDYYLRNGDMKL 250
N ++ Y GD +L
Sbjct: 183 NVVSYNTLLRVY---GDAEL 199
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P++ TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G + D + + Y AGL A+R L+EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRCSG-IEIDQVLYQTMIVAYERAGLVAHAKRLLQELKRPDN 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD + I + G + E ++R A + MI + K P
Sbjct: 321 IPRDTA-----IHILAGAGRIEEATWVFRQAVEAGEVKDITVFERMINLFSKHKKYPNVV 375
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F + V +++ AY K + A +
Sbjct: 376 EVFDKMRGLGYFPHSNVIALVLNAYGKLHEFDKANSV 412
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M++ + +++ ++++++++ K G ++ + Q+++ S I D Y
Sbjct: 236 EKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R+++E+KR + D T LA AG E+A ++
Sbjct: 296 IVAYERAGLVAHAKRLLQELKRPDNIPRD-TAIHILAG----AGRIEEATWVFRQAVEAG 350
Query: 123 AHRDLSAYQFLITLYGQTG---NLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L+ + N+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFERMINLFSKHKKYPNVVEVFDKMRGLGY-FPHS------NVIALVLNAYGKL 403
Query: 176 KDLPGAEKCFKEWES-GCATYD 196
+ A + E + GCA D
Sbjct: 404 HEFDKANSVYMEMQDEGCAFSD 425
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 7 ALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRAL 66
+L+E M+ L S F ++ YA+ ++ ++M + D YN + L
Sbjct: 200 SLVEAMRCRGL-LSKDTFRLIVRRYARARKVKEAVETFEKMAGFGLKADLSDYNWLIDVL 258
Query: 67 AAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRD 126
+ + A + +EMKR+GR D T++ L + + +E+ + D
Sbjct: 259 SKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPD 318
Query: 127 LSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
+ AY LI+ + ++G E +++R + + Y +I L + + L A K F+
Sbjct: 319 VVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFE 378
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
++ ++ N ++GAY + + ++A ++ + R+ G PN++T++I + +++
Sbjct: 379 LSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKS 437
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/246 (15%), Positives = 100/246 (40%), Gaps = 1/246 (0%)
Query: 6 EALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRA 65
+++ ++M + L + + L++ + K+G ++ + +EM+ + MP + Y + +
Sbjct: 304 KSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLING 363
Query: 66 LAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHR 125
L + + A + E K G + T + + Y + F+ A + + E+
Sbjct: 364 LGSEERLDEALKYFELSKASG-FPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGP 422
Query: 126 DLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCF 185
+ Y ++ ++ + E Y +++ + +Y M+ + + + + A K +
Sbjct: 423 NSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVW 482
Query: 186 KEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRN 245
+ + + + + +I E RLE A + RG P + + + +
Sbjct: 483 NQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEG 542
Query: 246 GDMKLA 251
G + LA
Sbjct: 543 GRISLA 548
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 1/262 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ + A + L+KM++ + + +++L+ L K K +I +K S PD YN
Sbjct: 24 LFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 83
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ A +I EM+ G V D ++S L ++YVE F +A E+
Sbjct: 84 AMINVFGKAKLFREARSLISEMRTAG-VTPDTASYSTLLTMYVENKKFLEALSVFAEMRE 142
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
DL+ +I +YGQ G E +++ +R +SY +++V + +
Sbjct: 143 IKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGE 202
Query: 181 AEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
A F+ + ++ N M+ Y K E A L + + RG +PN+ T+
Sbjct: 203 AIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIIS 262
Query: 241 YYLRNGDMKLAVDCLEKAIDTG 262
+ + G + A +K +G
Sbjct: 263 IWGKVGKLDRAAMLFQKLRSSG 284
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 168
A L+ DL AY +I ++G+ E + +R A P+TA SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTA--SYSTL 120
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 229 DPNAKTWEIFSDYYLRNGDMKL 250
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P+S TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSG-VDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
RD++ I + G + E ++R A + MI + K
Sbjct: 321 IPRDIA-----IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVV 375
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEEL 219
+ F E D V +++ AY K + A ++
Sbjct: 376 EVFDEMRGLGYFPDSNVIALVLNAYGKLHEFDKANDV 412
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A ++ A+R++ E+KR + D I AG E+A ++ +
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRDIAI-----HILAGAGRIEEATWVFRQAIDAG 350
Query: 123 AHRDLSAYQFLITL---YGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN----L 175
+D++ ++ +I L Y + GN+ EV+ R L FP++ N+I +++N L
Sbjct: 351 EVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGY-FPDS------NVIALVLNAYGKL 403
Query: 176 KDLPGAEKCFKEW-ESGCATYD 196
+ A + E E GC D
Sbjct: 404 HEFDKANDVYMEMQEVGCVFSD 425
>gi|255661168|gb|ACU25753.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 352
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 1/260 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+ A + L+KM++ + + +++L+ L K K +I +K S PD YN
Sbjct: 26 DAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 85
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ A +I EM+ G V + T++S L ++YVE F +A E+
Sbjct: 86 INVFGKAKLFREARSLISEMRTAG-VTPNTTSYSTLLTMYVENKKFLEALSVFAEMREIK 144
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
DL+ +I +YGQ G E +++ +R +SY +++V + + A
Sbjct: 145 CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAI 204
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
F+ + ++ N M+ Y K E A L + + RG +PN+ T+ +
Sbjct: 205 HLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIW 264
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G + A +K +G
Sbjct: 265 GKVGKLDRAAMLFQKLRSSG 284
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 51 SIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEK 110
++ PD YTY+ + A +++M++D RV D +SNL + + + K
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQD-RVPGDLVLYSNLIELSRKLCDYSK 62
Query: 111 AERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLA--FPNTANISYLNM 168
A L+ DL AY +I ++G+ E + +R A PNT SY +
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTT--SYSTL 120
Query: 169 IQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGA 228
+ + V K A F E D+ N+MI Y + G + A++L R+ G
Sbjct: 121 LTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGI 180
Query: 229 DPNAKTWEIFSDYYLRNGDMKL 250
+PN ++ Y GD +L
Sbjct: 181 EPNVVSYNTLLRVY---GDAEL 199
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A L M+ N+ + + +NS+M +Y KT EK +IQEM+ I P+S TY+ +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN-RN 122
V + A + ++++ G V D + + Y AGL A+R L EL+ N
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSG-VDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDN 320
Query: 123 AHRDLSAY 130
RD++ +
Sbjct: 321 IPRDIAIH 328
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A ++ +M+E+ N ++ +Y + G ++ + M+ I P+ +YN +
Sbjct: 132 EALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLL 191
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
R A + M+R + + T++++ IY + EKA ++E++NR
Sbjct: 192 RVYGDAELFGEAIHLFRLMQRKN-IEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGI 250
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMI 169
+ Y +I+++G+ G L +++ LR + + + Y MI
Sbjct: 251 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMI 296
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A+ L M+++ + + + +N+L+ +Y + + + M+ +I + TYN
Sbjct: 164 MAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 223
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
M + A +I+EM+ G + + T+S + SI+ + G ++A ++L +
Sbjct: 224 SMMMIYGKTLEHEKANNLIQEMQNRG-IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 282
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
D YQ +I Y + G ++ R+ L+
Sbjct: 283 SGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELK 316
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 50/89 (56%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
EKA L+++M+ + +S+ ++++++++ K G ++ + Q++++S + D Y
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTM 295
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAAD 91
+ A ++ A+R++ E+KR + D
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRD 324
>gi|449444598|ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27270-like [Cucumis sativus]
Length = 1062
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 155/361 (42%), Gaps = 29/361 (8%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
K + L +M E+ + FS + ++ K GH E+ + EMK +P+ TYN+ +
Sbjct: 277 KVKELWMQMVEIGVTFSDFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFIPEEVTYNLLI 336
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ R+ ++M+ V +++T S+L +++ + G + KA E+E++
Sbjct: 337 SLSIKRENSDEVLRLYKDMRDKDIVPSNYTC-SSLLTLFYKNGDYSKALSLFSEMESKKV 395
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
D Y LI +YG+ G + ++ + + T SYL M QV +N ++ A
Sbjct: 396 VVDEVIYGLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALD 455
Query: 184 CFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYL 243
+ +S V + Y + + +AE + + G P+A++ + YL
Sbjct: 456 IIELMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGL-PDARSCIYILNLYL 514
Query: 244 RNGDMKLAVDCLEKAID---TGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILK 300
+ +D + KA D R DG V E + +R + +E + AE +E++K
Sbjct: 515 K-------LDLVNKAKDFIAHIRKDG--VVFDEELYKLVLRVYCKEGLSEDAEILIELMK 565
Query: 301 K---AVDDLGVEVF------------EPLIRTYAAAGRTSPVMLRRLKMEKVEVSEASKK 345
K VD+ +E F E I Y + M+ RL + +VS+ +K
Sbjct: 566 KDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQPDHIALDMILRLYLANGDVSKRNKI 625
Query: 346 L 346
L
Sbjct: 626 L 626
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +A L ++M E + + +N ++ +YA G E+ +++ M+ +I+PDS+TY
Sbjct: 859 THEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIVPDSFTYFS 918
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+RA S AE++I M+ G + + L S +AG+ KAER EL+
Sbjct: 919 LIRAYTQSCKYSEAEKIINSMQEKG-IPTTCAHYDLLLSALAKAGMIRKAERVYDELQTA 977
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 152
D++ + L+ Y G + E + + S
Sbjct: 978 GLSPDVTCNRTLMRGYLDYGYVREGIKFFES 1008
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 113/252 (44%), Gaps = 1/252 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE +M E+ L + +++ YA+ GH + + + +K I+P +N +
Sbjct: 208 AEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKTMLSFYSAVKDRGIVPPIAVFNFMLS 267
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+L + + + +M G +D+T ++ + + V+ G E+A + E++N
Sbjct: 268 SLQKKGLHAKVKELWMQMVEIGVTFSDFT-YTVVINSLVKEGHSEEAFKVFNEMKNCGFI 326
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y LI+L + N EV R+++ +R +N + +++ + D A
Sbjct: 327 PEEVTYNLLISLSIKRENSDEVLRLYKDMRDKDIVPSNYTCSSLLTLFYKNGDYSKALSL 386
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
F E ES D + ++I Y K G E+A + E + G + K++ + +L
Sbjct: 387 FSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEMEQLGLLTDEKSYLAMAQVHLN 446
Query: 245 NGDMKLAVDCLE 256
+ + + A+D +E
Sbjct: 447 SRNFEKALDIIE 458
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 117/261 (44%), Gaps = 9/261 (3%)
Query: 2 TEKAEALLEKMKELNLGF--SSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTY 59
+E+A + +MK N GF + +N L++L K + +++ + ++M+ I+P +YT
Sbjct: 310 SEEAFKVFNEMK--NCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMRDKDIVPSNYTC 367
Query: 60 NVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELE 119
+ + D S A + EM+ +V D + L IY + GL+E A + +E+E
Sbjct: 368 SSLLTLFYKNGDYSKALSLFSEMESK-KVVVDEVIYGLLIRIYGKLGLYEDAHKTFEEME 426
Query: 120 NRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLP 179
D +Y + ++ + N + I ++ + +Y+ +Q V +D+
Sbjct: 427 QLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYVMKEDIR 486
Query: 180 GAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFS 239
AE F+ S D R ++ Y K + A++ R+ G + + +++
Sbjct: 487 SAESTFQAL-SKTGLPDARSCIYILNLYLKLDLVNKAKDFIAHIRKDGVVFDEELYKLVL 545
Query: 240 DYYLRNG---DMKLAVDCLEK 257
Y + G D ++ ++ ++K
Sbjct: 546 RVYCKEGLSEDAEILIELMKK 566
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 1/225 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A + E M L + S +N+++++Y + +K + ++S + PD Y +
Sbjct: 792 ASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNLIS 851
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
A + +EM +G V +++ + ++Y AGL E+ E LK +E
Sbjct: 852 CYGKAGKTHEASLLFKEMLEEG-VKPGMVSYNIMVNVYANAGLHEETENLLKAMEQDAIV 910
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D Y LI Y Q+ SE +I S++ T Y ++ L + AE+
Sbjct: 911 PDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCAHYDLLLSALAKAGMIRKAERV 970
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGAD 229
+ E ++ + D+ ++ Y G + + E + D
Sbjct: 971 YDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIKFFESTCKYAGD 1015
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 86/229 (37%), Gaps = 7/229 (3%)
Query: 55 DSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERA 114
D+ +N +++A+ + A R+ E M G + T++ + S+Y +KA
Sbjct: 772 DTVAFNTFIKAMLEGGKLHFASRIYEHMIALG-IVPSIQTYNTMISVYGRGRKLDKAVEM 830
Query: 115 LKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVN 174
+ D AY LI+ YG+ G E +++ + +SY M+ V N
Sbjct: 831 FNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYAN 890
Query: 175 LKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
E K E D +I AY + + AE++ + +G
Sbjct: 891 AGLHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCAH 950
Query: 235 WEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
+++ + G ++ A E+ D + G P RT MR +
Sbjct: 951 YDLLLSALAKAGMIRKA----ERVYDELQTAG--LSPDVTCNRTLMRGY 993
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 127/327 (38%), Gaps = 23/327 (7%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
++E AE L+E MK+ L F F + K EK + I PD +
Sbjct: 553 LSEDAEILIELMKKDEL-FVDNKFMETFSFMFKLDGGEKNESTI----VGYDQPDHIALD 607
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ +R A D+S ++++ + G V T S L + + G KA KEL
Sbjct: 608 MILRLYLANGDVSKRNKILKFIIGKGGV----TVVSQLVANLIREGDSLKAGTLTKELLK 663
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
+ D + LI+LYG+ +++ + + +A T+ + + +MI +
Sbjct: 664 LDCRLDDAIIASLISLYGKERKINQAAEVLAA--VANSCTSTLIFGSMIDAYIKCDKAEE 721
Query: 181 AEKCFKEW-ESGCATYDIRVTNV--MIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
A +KE E G YD+ V ++ G+ AE + + G + + +
Sbjct: 722 ASTLYKELIEKG---YDLGAVAVSRIVNTLTVGGKHRVAENVVRASLNCGLELDTVAFNT 778
Query: 238 FSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLE 297
F L G + A E I G VPS +T T + + + + +D A
Sbjct: 779 FIKAMLEGGKLHFASRIYEHMIALG------IVPSIQTYNTMISVYGRGRKLDKAVEMFN 832
Query: 298 ILKKAVDDLGVEVFEPLIRTYAAAGRT 324
+ + + + LI Y AG+T
Sbjct: 833 AARSSGLSPDEKAYTNLISCYGKAGKT 859
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 43 IIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIY 102
++ M I+ D YN+ AL + +S + ++MK +G + D T++ + S Y
Sbjct: 415 LLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNG-IIPDVFTYNIMISSY 473
Query: 103 VEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTAN 162
GL +KA + +E + D+ Y LI G+ G+L E + +++ ++ +
Sbjct: 474 GRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDV 533
Query: 163 ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKER 222
+Y +I+ + A F E S T +I N+++ + G+ E A +L E
Sbjct: 534 FTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRGKTEEAHKLYET 593
Query: 223 ARRRGADPNAKTWEIF 238
+++G P++ T+ I
Sbjct: 594 MKQQGLIPDSITYSIL 609
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 8 LLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALA 67
L +KMK + +N +++ Y + G +K + + M+ASS PD TYN + L
Sbjct: 450 LFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLG 509
Query: 68 AVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDL 127
D+ A + +EM+ G D T+S L + ++ E A E+ + ++
Sbjct: 510 KHGDLDEAHMLFKEMQEKG-YDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNI 568
Query: 128 SAYQFLITLYGQTGNLSEVYRIWRSLR 154
Y L+ + G E ++++ +++
Sbjct: 569 VTYNILLDCLERRGKTEEAHKLYETMK 595
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/358 (18%), Positives = 131/358 (36%), Gaps = 45/358 (12%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
K + E+M+ +N L+ AK G ++ + ++MK +PD+YTY +
Sbjct: 202 VSKGFQVYEEMRRKGYKLDIFAYNMLLDALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTI 261
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRV--------------------------------- 88
+R S +EM G V
Sbjct: 262 LIRMSGKAGRTSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVEND 321
Query: 89 -AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVY 147
+ T+S I G + L ++ +R +R S Y +L+ ++G+ SE +
Sbjct: 322 CQPNQFTYSITLDILATEGQLHRLNEVL-DICSRFMNR--SIYSYLVKSLCKSGHASEAH 378
Query: 148 RIWRSLRLAFPNTANISYLNMIQVLVNL-KDLPGAEKCFKEWESGCATYDIRVTNVMIGA 206
++ + + ++++M++VL N K L + E G T D+ + N++ A
Sbjct: 379 NVFCRMWNSHEKGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVT-DVGMYNMVFSA 437
Query: 207 YAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDG 266
K ++ L ++ + G P+ T+ I Y R G + A + E +
Sbjct: 438 LGKLKQVSFISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM------EA 491
Query: 267 GKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTYAAAGRT 324
P T + + + D+D A + +++ D V + LI + + +
Sbjct: 492 SSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKV 549
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/331 (16%), Positives = 125/331 (37%), Gaps = 37/331 (11%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T K + ++M + + FN+++ K +K+ ++ +M + P+ +TY++
Sbjct: 272 TSKFLSFFDEMVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSI 331
Query: 62 WMRALAA---------VNDI-------SGAERVIEEMKRDGRVA---------------A 90
+ LA V DI S +++ + + G +
Sbjct: 332 TLDILATEGQLHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKG 391
Query: 91 DWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIW 150
D F ++ + A +A L + + D+ Y + + G+ +S + ++
Sbjct: 392 DRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLF 451
Query: 151 RSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKE 210
++ +Y MI + + A + F+ E+ D+ N +I K
Sbjct: 452 DKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKH 511
Query: 211 GRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWV 270
G L+ A L + + +G DP+ T+ I + + ++ +++A ++ I G
Sbjct: 512 GDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEG------CT 565
Query: 271 PSSETIRTFMRHFEQEKDVDGAEGFLEILKK 301
P+ T + E+ + A E +K+
Sbjct: 566 PNIVTYNILLDCLERRGKTEEAHKLYETMKQ 596
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
+ +KA L E M+ + + +NSL+ K G ++ + +EM+ PD +TY+
Sbjct: 478 LVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYS 537
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + N + A + +EM +G + T++ L G E+A + + ++
Sbjct: 538 ILIECFGKSNKVEMACSLFDEMISEG-CTPNIVTYNILLDCLERRGKTEEAHKLYETMKQ 596
Query: 121 RNAHRDLSAYQFL 133
+ D Y L
Sbjct: 597 QGLIPDSITYSIL 609
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 115/293 (39%), Gaps = 7/293 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+NS+++ K G ++ ++ +M P++ TYN + L N + A + +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
G + D TF++L A +E+ ++ D Y LI G L
Sbjct: 393 SKG-ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 144 SEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + + + L+ + I+Y +I AE+ F E E + + N +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I K R+E+A +L ++ G P+ T+ ++ R GD+K A D ++ G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG- 570
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIR 316
P T T + + V+ A L ++ +L + P+I+
Sbjct: 571 -----CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 41/251 (16%)
Query: 10 EKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEM-KASSIMPDSYTYNVWMRALAA 68
E+M E +S++ N ++ + K G E IQEM PD YT+N + L
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 69 VNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLS 128
+ A +++ M ++G D T++++ S + G ++A L ++ R+ +
Sbjct: 308 AGHVKHAIEIMDVMLQEG-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 129 AYQFLITLYGQTGNLSEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFK 186
Y LI+ + + E + R L + P+ ++ ++IQ L
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVC--TFNSLIQGL-------------- 410
Query: 187 EWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNG 246
C T + RV A EL E R +G +P+ T+ + D G
Sbjct: 411 -----CLTRNHRV----------------AMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 247 DMKLAVDCLEK 257
+ A++ L++
Sbjct: 450 KLDEALNMLKQ 460
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A +L++M+ S + +N+L+ + K + I EM+ + +S TYN
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L + A +++++M +G+ D T+++L + + G +KA ++ + +
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D+ Y LI+ + G + ++ RS+++ N +Y +IQ L + A
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 183 KCFKE 187
F+E
Sbjct: 631 NLFRE 635
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
T +AE + ++M+ + +S+ +N+L+ K+ E ++ +M PD YTYN
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ DI A +++ M +G D T+ L S +AG E A + L+ ++ +
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNG-CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+ AY +I + +E ++R +
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 7/194 (3%)
Query: 105 AGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANIS 164
+G F+ ++ L+++++ S + LI Y Q E+ + + F +
Sbjct: 96 SGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTH 155
Query: 165 YLN-MIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERA 223
+ N M+ +LV+ L E + D+ NV+I A + +L A + E
Sbjct: 156 FYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 224 RRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHF 283
G P+ KT+ Y+ GD+ A+ E+ ++ G W S+ ++ + F
Sbjct: 216 PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF----GCSW--SNVSVNVIVHGF 269
Query: 284 EQEKDVDGAEGFLE 297
+E V+ A F++
Sbjct: 270 CKEGRVEDALNFIQ 283
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 110/239 (46%), Gaps = 5/239 (2%)
Query: 24 FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMK 83
+ SL+ + + G K + +MK + + P+ YTY++ + +L I+ A V EM
Sbjct: 250 YTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMI 309
Query: 84 RDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNL 143
D + TF++L ++V+AG EK + +++ D +Y FLI + + NL
Sbjct: 310 -DAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENL 368
Query: 144 SEVYRIWRSL--RLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTN 201
E ++ ++ + PN + ++ ++ + L D+ GA + + + + + N
Sbjct: 369 DEAVKVLDTMVKKGVAPNAS--TFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYN 426
Query: 202 VMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
+++ +A ++ +LK+ +PN T+ I + G A + +++ ++
Sbjct: 427 ILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVE 485
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TEK + +MK L ++ +N L+ + K + ++ ++ M + P++ T+N
Sbjct: 333 TEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNS 392
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+A ++D++GA R+ +MK + + + T++ L ++ ++ + + KE++
Sbjct: 393 IFGCIAELHDVNGAHRMYAKMK-ELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDES 451
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+++ Y+ LI ++ + G+ + Y + + +
Sbjct: 452 EVEPNVNTYRILILMFCEKGHWNNAYNLMKEM 483
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A + +M + +++ FNSLM ++ K G EK+ + +MK D+ +YN +
Sbjct: 300 RAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLI 359
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ ++ A +V++ M + G VA + +TF+++ E A R +++
Sbjct: 360 ESHCKDENLDEAVKVLDTMVKKG-VAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKC 418
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEK 183
+ Y L+ ++ + ++ V ++ + + + +Y +I + A
Sbjct: 419 MPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYN 478
Query: 184 CFKEW-ESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG 227
KE E C ++ + ++ G+L+ EEL E+ RG
Sbjct: 479 LMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARG 523
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 4/189 (2%)
Query: 59 YNVWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKEL 118
YN + + A +I+ MK G V +TFS L YV AGL +A A +
Sbjct: 146 YNEMIDLAGKLRHFDLAWHLIDLMKSRG-VRITVSTFSVLVRRYVRAGLAAEAVHAFNRM 204
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAF-PNTANISYLNMIQVLVNLKD 177
E+ D ++ +I+ + SE + SL+ F P+ I Y +++ D
Sbjct: 205 EDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEPDV--IVYTSLVHGWCRAGD 262
Query: 178 LPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEI 237
+ AE+ F + + ++ +++I + + G++ A ++ G DPNA T+
Sbjct: 263 IAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNS 322
Query: 238 FSDYYLRNG 246
+++ G
Sbjct: 323 LMRVHVKAG 331
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 133/325 (40%), Gaps = 12/325 (3%)
Query: 18 GFSSMP--FNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGA 75
GF S P +N ++ L K H + +I MK+ + T++V +R + A
Sbjct: 138 GFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEA 197
Query: 76 ERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLIT 135
M+ G D +FS + S + +AE L+++ D+ Y L+
Sbjct: 198 VHAFNRMEDYG-CKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-FEPDVIVYTSLVH 255
Query: 136 LYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEW-ESGCAT 194
+ + G++++ ++ ++ A +Y +I L + A F E ++GC
Sbjct: 256 GWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDP 315
Query: 195 YDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDC 254
+ N ++ + K GR E ++ + +R G + ++ + + ++ ++ AV
Sbjct: 316 NAVTF-NSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKV 374
Query: 255 LEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPL 314
L+ + G P++ T + + DV+GA +K+ + L
Sbjct: 375 LDTMVKKGVA------PNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNIL 428
Query: 315 IRTYAAAGRTSPVMLRRLKMEKVEV 339
+R +A + V+ + +M++ EV
Sbjct: 429 MRMFADSKSIDMVLKLKKEMDESEV 453
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 10/284 (3%)
Query: 11 KMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVN 70
KMKE + N+ ++ PE + + ++M+ + I P+ YT N+ + A +
Sbjct: 175 KMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLG 234
Query: 71 DISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA-HRDLSA 129
+++ A V+E+MK G + + TF++L S Y + GL A + + +N ++
Sbjct: 235 ELNKASEVLEKMKDMG-LCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVT 293
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
+ LI + + G L E R++ ++LA ++Y +I + F+E E
Sbjct: 294 FNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEME 353
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWE-IFSDYYLRNGDM 248
DI N +I KEG+ + A + + + PNA T+ + + +RN
Sbjct: 354 RNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSE 413
Query: 249 KLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+ A + +G + P+ T R F + +D DGA
Sbjct: 414 R-AFLVYRSMVRSG------FSPNENTFRMLASAFCKNEDFDGA 450
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 92/236 (38%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N +++ Y K G K ++++MK + P+ T+N + + A +V + M
Sbjct: 224 NMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMG 283
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
V + TF+ L + + + G +A R E++ N ++ Y LI +GQ GN
Sbjct: 284 KNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSE 343
Query: 145 EVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMI 204
++ + ++Y +I L A KE + G + + +I
Sbjct: 344 MGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALI 403
Query: 205 GAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAID 260
E A + R G PN T+ + + + +N D AV L ++
Sbjct: 404 AGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLE 459
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 109/269 (40%), Gaps = 8/269 (2%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
N L+ ++G P + +M+ + ++PD +T + +A ++ A +EEM+
Sbjct: 187 NRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEG 246
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
G + + + + Y G E A R L+ L+ + ++ Y L+ Y + G +
Sbjct: 247 MG-LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRME 305
Query: 145 EVYRIWRSLRLAFPNTAN-ISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E R+ + ++ + ++Y MI + A + E ++ V N M
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTM 365
Query: 204 IGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGR 263
I K GR+E +++ + G P+ ++ D Y R G M+ A + + G
Sbjct: 366 INGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG- 424
Query: 264 GDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
++ T T ++ F +D A
Sbjct: 425 -----LAATTLTYNTLLKGFCSLHAIDDA 448
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 127/319 (39%), Gaps = 44/319 (13%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASS-IMPDSYTYN 60
TE A +LE ++ L + + + L+ Y K G E+ +++EMK + I+ D Y
Sbjct: 269 TEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYG 328
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
+ + + A RV EM RD + + ++ + + + G E+ ++ L+E+E+
Sbjct: 329 MMINGYCQRGRMDDATRVRNEM-RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387
Query: 121 RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPG 180
D +Y LI Y + G++ + + + R + ++Y +++ +L +
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447
Query: 181 A--------------------------------EKCFKEWESGCA---TYDIRVTNVMIG 205
A E+ W+ A ++ N +I
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507
Query: 206 AYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGD 265
K GR+ AEEL +R + P++ T+ D Y + G + A + K G
Sbjct: 508 GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG--- 564
Query: 266 GGKWVPSSETIRTFMR-HF 283
+ PS E +F+ HF
Sbjct: 565 ---FAPSVEMFNSFITGHF 580
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 2/260 (0%)
Query: 4 KAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWM 63
+A +E+M+ + L + + ++++M Y G E I++ ++ + P+ TY + +
Sbjct: 236 QAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLV 295
Query: 64 RALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNA 123
+ + AERV++EMK G + D + + + Y + G + A R E+ +
Sbjct: 296 KGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGI 355
Query: 124 HRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA-E 182
H +L Y +I + G + EV ++ + + SY +I + A E
Sbjct: 356 HVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFE 415
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
C +G A + N ++ + +++A L +RG PN + D
Sbjct: 416 MCRMMVRNGLAATTL-TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGL 474
Query: 243 LRNGDMKLAVDCLEKAIDTG 262
+ G + A++ ++ + G
Sbjct: 475 FKAGKTEQALNLWKETLARG 494
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 105/284 (36%), Gaps = 27/284 (9%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A L+ KM+ L S FNS +T + K+ I EM A + P+ TY +
Sbjct: 553 ATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIA 612
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN---- 120
++ A + EM +G + + S L S + + G ++A L++L N
Sbjct: 613 GWCKEGNLHEACNLYFEMVNNG-MNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI 671
Query: 121 ----------------------RNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFP 158
N H + +I ++G +++ ++ SLR
Sbjct: 672 PGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRF 731
Query: 159 NTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEE 218
N +Y ++I + A S T +I N +I K G+L A
Sbjct: 732 LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVN 791
Query: 219 LKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
L + + +G PN T+ D Y + G A +K ++ G
Sbjct: 792 LFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 138/376 (36%), Gaps = 35/376 (9%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+A L ++ L + + FN+++ K G + ++ MK PDS TY
Sbjct: 480 TEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRT 539
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
+ + A ++ +M+ G A F++ + + A + K E+ R
Sbjct: 540 LFDGYCKLGQLGTATHLMNKMEHLG-FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIW---------------RSLRLAFPNTANISYL 166
+L Y LI + + GNL E ++ +L F +
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA 658
Query: 167 NMI-QVLVNLKDLPGAEKCFKEWESGCATYDIRVT----------NVMIGAYAKEGRLEN 215
N++ Q LVN+ +PG E + D NV+I K GR+ +
Sbjct: 659 NLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIAD 718
Query: 216 AEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSET 275
A+ L E R + P+ T+ +G + A + + G P+ T
Sbjct: 719 AKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG------LTPNIIT 772
Query: 276 IRTFMRHFEQEKDVDGAEGFLEILK-KAVDDLGVEVFEPLIRTYAAAGRTSPVMLRRLKM 334
+ + + + A L+ K + G+ + LI Y G+T+ + KM
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI-TYNTLIDEYCKEGKTTEAFKLKQKM 831
Query: 335 EKVEVSEASKKLLEAI 350
+ E + KLL+ +
Sbjct: 832 VEEGYMEEAIKLLDQM 847
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 99/242 (40%), Gaps = 28/242 (11%)
Query: 25 NSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKR 84
++LM+ + K G ++ ++Q++ ++P + + ++ V D
Sbjct: 643 SALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIA---------- 692
Query: 85 DGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLS 144
DG + ++ + ++G A+ + L N+ D Y LI +G++
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752
Query: 145 EVYRIWRSLRLAFPNTANI-SYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVM 203
E + + R + L+ T NI +Y ++I L L A F + +S + + N +
Sbjct: 753 EAFSL-RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTL 811
Query: 204 IGAYAKEGR----------------LENAEELKERARRRGADPNAKTWEIFSDYYLRNGD 247
I Y KEG+ +E A +L ++ DPN T+ Y+++G+
Sbjct: 812 IDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGN 871
Query: 248 MK 249
M+
Sbjct: 872 ME 873
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 9/249 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+++ + + + L S + FN+LM+ Y + G ++ + M AS + PD YTY+V +
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + + A + EM +G V + TF+ L + + G + A K+L ++
Sbjct: 215 GLCKESKMDEANELFNEMLDNGLV-PNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFS 273
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y LI + G+L + + + + I+Y +I DL A
Sbjct: 274 PDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAF-- 331
Query: 185 FKEWESGCATYDIRVTNV----MIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSD 240
E+ +IR+ +V +I +EGR +AE++ G P+ T+ + +
Sbjct: 332 --EYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIIN 389
Query: 241 YYLRNGDMK 249
+ + GD+K
Sbjct: 390 EFCKKGDVK 398
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 1/185 (0%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
++A L +M + L + + F +L+ + K G + I +++ + PD TYN
Sbjct: 223 DEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTL 282
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRN 122
+ L D+ A +I+EM + D T++ L + G E A K + N
Sbjct: 283 IFGLCKKGDLKQARDLIDEMSMK-ELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 123 AHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D AY LI+ Q G + ++ R + N +Y +I D+
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGS 401
Query: 183 KCFKE 187
K KE
Sbjct: 402 KLLKE 406
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
+KA ++E MK S + +N+++ Y K G K A+++EM A I P+ T+N+
Sbjct: 246 QKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNIL 305
Query: 63 MRALAAVNDISGAERVIEEMKRDGR----------------------------------V 88
+ +++ A++V EEM+R G +
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365
Query: 89 AADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYR 148
+ T++ L + + + + ++A L ++ R ++ + LI YG+ G + + +
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF- 424
Query: 149 IWRSLRLAFPNTANISYLNMIQV-LVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAY 207
+ RS+ L N+S N + V ++ A K KE E D+ N+++ A
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484
Query: 208 AKEGRLENAEELKER---ARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDTG 262
K+G A L + ++G N T+ + + G ++ A L + ++ G
Sbjct: 485 CKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG 542
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 115/274 (41%), Gaps = 7/274 (2%)
Query: 19 FSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERV 78
S++ N ++ K G + ++ +EM I + T++V + L V A V
Sbjct: 192 LSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV 251
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+E+MK G + T++ + Y +AG KA+ LKE+ + H + + LI +
Sbjct: 252 VEDMKAWG-FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFC 310
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+ N++ +++ ++ ++Y ++I L + L A + ++
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
N +I + K+ L+ A E+ + +RG PN T+ D Y + G M A
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGA 292
+DTG P+ T + F +E +V A
Sbjct: 431 LDTG------VCPNVSTYNCLIVGFCREGNVKEA 458
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 102/247 (41%), Gaps = 1/247 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
E++ ++M +G + + F+ ++ K G +K ++++MKA P TYN +
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
+ A+ +++EM R+ + TF+ L + A++ +E++ +
Sbjct: 273 GYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
++ Y LI G L E + + ++Y +I K L A +
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
+ ++ N +I AY K GR+++A L+ G PN T+ + R
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451
Query: 245 NGDMKLA 251
G++K A
Sbjct: 452 EGNVKEA 458
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 1 MTEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYN 60
M ++A +L+ + + L + + FN+L+ Y K G + + M + + P+ TYN
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYN 443
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKE--- 117
+ ++ A ++ +EM+ +G + AD T++ L + G KA R L E
Sbjct: 444 CLIVGFCREGNVKEARKLAKEMEGNG-LKADLVTYNILVDALCKKGETRKAVRLLDEMTL 502
Query: 118 LENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSL 153
+E + ++ Y LI + G L E R+ +
Sbjct: 503 MEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
TE+ + L ++M NL +++ +N L+ Y ++G + ++MK I P+S TY
Sbjct: 618 TEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTS 677
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ ++ ++ + A+ ++EEM+ +G + + ++ L Y + G K E L+E+ ++
Sbjct: 678 LIKGMSIISRVEEAKLLLEEMRMEG-LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 736
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLR 154
N H + Y +I Y + GN++E R+ +R
Sbjct: 737 NVHPNKITYTVMIGGYARDGNVTEASRLLHEMR 769
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 119/270 (44%), Gaps = 11/270 (4%)
Query: 22 MPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEE 81
+ +N+L++ ++ + EM + PD+YTY++ +R L +N + A + +
Sbjct: 533 VSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGD 592
Query: 82 MKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTG 141
KR+G + D T+S + +A E+ ++ E+ + N + Y LI Y ++G
Sbjct: 593 CKRNGMIP-DVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSG 651
Query: 142 NLSEVYRIWRSLRL--AFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRV 199
LS + ++ PN+A +Y ++I+ + + + A+ +E ++
Sbjct: 652 RLSMALELREDMKHKGISPNSA--TYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFH 709
Query: 200 TNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKAI 259
+I Y K G++ E L + PN T+ + Y R+G++ A L +
Sbjct: 710 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMR 769
Query: 260 DTGRGDGGKWVPSSETIRTFMRHFEQEKDV 289
+ G VP S T + F+ + ++ V
Sbjct: 770 EKG------IVPDSITYKEFIYGYLKQGGV 793
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A+ LLE+M+ L + + +L+ Y K G K+ +++EM + ++ P+ TY V
Sbjct: 688 VEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 747
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAG 106
+ A +++ A R++ EM+ G + D T+ Y++ G
Sbjct: 748 MIGGYARDGNVTEASRLLHEMREKG-IVPDSITYKEFIYGYLKQG 791
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 129/338 (38%), Gaps = 13/338 (3%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE LL++M + + F S++ L + + EM ++ P +
Sbjct: 411 AERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLIS 470
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L S A + + G + D T + L EAG E+ R KE+ R
Sbjct: 471 GLCKHGKHSKAVELWLKFLNKGFLV-DTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFV 529
Query: 125 RDLSAYQFLITLYGQTGN--LSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAE 182
D +Y LI+ G GN L E + + N +Y +I+ L+N+ + A
Sbjct: 530 MDRVSYNTLIS--GCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAI 587
Query: 183 KCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYY 242
+ + + + D+ +VMI K R E ++L + PN + Y
Sbjct: 588 QFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAY 647
Query: 243 LRNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKA 302
R+G + +A++ E G P+S T + ++ V+ A+ LE ++
Sbjct: 648 CRSGRLSMALELREDMKHKG------ISPNSATYTSLIKGMSIISRVEEAKLLLEEMRME 701
Query: 303 VDDLGVEVFEPLIRTYAAAGRTSPV--MLRRLKMEKVE 338
+ V + LI Y G+ V +LR + + V
Sbjct: 702 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 739
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 94/233 (40%), Gaps = 1/233 (0%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNV 61
E+A L KM+E + + + +N+++ +G ++ ++M + P TY++
Sbjct: 268 VEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327
Query: 62 WMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENR 121
++ L I A V++EM G + ++NL +EAG KA + ++
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKG-FPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSK 386
Query: 122 NAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGA 181
S Y LI Y ++G R+ + + N S+ ++I +L + A
Sbjct: 387 GLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSA 446
Query: 182 EKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKT 234
+ E + + +I K G+ A EL + +G + KT
Sbjct: 447 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKT 499
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 127/308 (41%), Gaps = 9/308 (2%)
Query: 21 SMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM--PDSYTYNVWMRALAAVNDISGAERV 78
S+ +++T+ EK A + +KA + + YTYNV ++ L + +E++
Sbjct: 106 SLSAKNIVTVLNNINRWEKALAFFEWLKARPELYEINRYTYNVMLKILRNGRQLELSEKL 165
Query: 79 IEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYG 138
+EEM G + D TFS L + E+A + + +++ D Y +I +YG
Sbjct: 166 VEEMTGRG-IQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYG 224
Query: 139 QTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIR 198
+ G ++E ++ L+ ++Y + V D + +E ++ +
Sbjct: 225 RVGRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPNAV 284
Query: 199 VTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMKLAVDCLEKA 258
+ N ++G +K G++ A+++ R G P T I + Y R G A + E
Sbjct: 285 IMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEVYETL 344
Query: 259 IDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAVDDLGVEVFEPLIRTY 318
G W + M+ + V+ AE L+ +K+A + + + TY
Sbjct: 345 KTEG------WKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTAMNTY 398
Query: 319 AAAGRTSP 326
A G P
Sbjct: 399 ATKGMVDP 406
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 122/261 (46%), Gaps = 9/261 (3%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E +E L+E+M + + F++L+ + PE+ + MK+ I+PD TYN
Sbjct: 160 ELSEKLVEEMTGRGIQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSV 219
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAADW----TTFSNLASIYVEAGLFEKAERALKEL 118
+ V ++ A + E++K + +W T+ +A++Y AG ++ + ++E+
Sbjct: 220 IDMYGRVGRVNEAVELYEKLK-----SVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEM 274
Query: 119 ENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDL 178
+ + + L+ + G +++ +++ +R + + ++ ++++ +
Sbjct: 275 RDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAY 334
Query: 179 PGAEKCFKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIF 238
A + ++ ++ D+ V N ++ A + GR+E AE++ + +R G +P+ T+
Sbjct: 335 DQAFEVYETLKTEGWKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHLTYRTA 394
Query: 239 SDYYLRNGDMKLAVDCLEKAI 259
+ Y G + A +K +
Sbjct: 395 MNTYATKGMVDPARRMFDKVV 415
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 3 EKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVW 62
E+AE +L++MK + + + M YA G + + ++ A + PD+ + V
Sbjct: 370 EQAEDILKEMKRAGCNPDHLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVM 429
Query: 63 MRALAAVNDISGAERVIEEMKRDGRVAAD 91
+RA +I A ++ +EM G + D
Sbjct: 430 IRACKLAGEIEQASKIFDEMMESGCCSPD 458
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 1/242 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
AE L ++M++ L + + F +L+ ++ + +M + PD YN +
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLN 371
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L V D++ A ++++EM+ G + D T++ L Y + G E A K +
Sbjct: 372 GLCKVGDVNKARKLVDEMRMVG-MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
D A+ LI+ + + G + + R R + A + +Y +I ++ K
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
KE + + NV++ K+G+++NA L E G P+ T+ I + + +
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK 550
Query: 245 NG 246
NG
Sbjct: 551 NG 552
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A+ + ++++ L +++ FN+L+ K+ + ++ + + M+ + I PD +TY+V +
Sbjct: 242 AKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIH 301
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L + AE++ +EM++ G + + TF+ L + + A ++
Sbjct: 302 GLCKEGRLDVAEQLFDEMQQRG-LRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVK 360
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
DL Y L+ + G++++ ++ +R+ I+Y +I DL A +
Sbjct: 361 PDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI 420
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLR 244
K D +I + ++GR+ +AE G P+ T+ + D Y +
Sbjct: 421 RKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK 480
Query: 245 NGDMKLAVDCLEKAIDTGRGDG 266
G++K+ L++ G G
Sbjct: 481 KGNVKMGFKLLKEMQINGHKPG 502
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%)
Query: 130 YQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKCFKEWE 189
Y LI + + G++ + I+ +R +S+ +I L ++L + K E
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285
Query: 190 SGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRGADPNAKTWEIFSDYYLRNGDMK 249
D+ +V+I KEGRL+ AE+L + ++RG PN T+ D R+ +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345
Query: 250 LAVDCLEKAIDTG 262
A++ + + G
Sbjct: 346 SAMNTYHQMLTMG 358
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 127/315 (40%), Gaps = 16/315 (5%)
Query: 5 AEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIMPDSYTYNVWMR 64
A AL+ +M+ L LG S L YA G P + M + D +++N +
Sbjct: 120 AWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLD 179
Query: 65 ALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELENRNAH 124
L N + A ++ +K R D +++ LA+ Y A R LKE+ R
Sbjct: 180 ILCKSNRVETAHDLLRTLK--SRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIE 237
Query: 125 RDLSAYQFLITLYGQTGNLSEVYRIWRSLRLAFPNTANISYLNMIQVLVNLKDLPGAEKC 184
+ Y ++ Y ++ + E + + ++ +SY +I ++ A++
Sbjct: 238 PTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRV 297
Query: 185 FKEWESGCATYDIRVTNVMIGAYAKEGRLENAEELKERARRRG-ADPNAKTWEIFSDYYL 243
F E ++ N +I + K+ ++NA + E R G PN T+ +
Sbjct: 298 FDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLC 357
Query: 244 RNGDMKLAVDCLEKAIDTGRGDGGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEILKKAV 303
GDM+ A+ +E+ + G S +T +R+F +++ LE+ K
Sbjct: 358 HVGDMERALGFMERMGEHG------LRASVQTYNVVIRYFCDAGEIEKG---LEVFGKMG 408
Query: 304 DDLGVEVFEPLIRTY 318
D L + P + TY
Sbjct: 409 DGLCL----PNLDTY 419
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 2 TEKAEALLEKMKELNLGFSSMPFNSLMTLYAKTGHPEKIPAIIQEMKASSIM-PDSYTYN 60
+KA+ + ++M + + + +N+L+ ++ K + A+ +EM + P+ T+N
Sbjct: 291 VKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFN 350
Query: 61 VWMRALAAVNDISGAERVIEEMKRDGRVAADWTTFSNLASIYVEAGLFEKAERALKELEN 120
V +R L V D+ A +E M G + A T++ + + +AG EK ++ +
Sbjct: 351 VVIRGLCHVGDMERALGFMERMGEHG-LRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGD 409
Query: 121 RNAHRDLSAYQFLIT 135
+L Y LI+
Sbjct: 410 GLCLPNLDTYNVLIS 424
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,375,083,785
Number of Sequences: 23463169
Number of extensions: 221908749
Number of successful extensions: 708155
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3507
Number of HSP's successfully gapped in prelim test: 4621
Number of HSP's that attempted gapping in prelim test: 641653
Number of HSP's gapped (non-prelim): 41712
length of query: 353
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 210
effective length of database: 9,003,962,200
effective search space: 1890832062000
effective search space used: 1890832062000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)