BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018583
(353 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 178 bits (451), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 127/166 (76%), Gaps = 10/166 (6%)
Query: 158 ASHQEKQSPRFSSSSSFSTGPVITNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKL 217
S +++ S R SSSS V T+K R+RWT +LHE FVE VN+LGG+++ATPKA+LKL
Sbjct: 212 VSSEDQLSGRNSSSS------VATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKL 265
Query: 218 MDSEGLTIFHVKSHLQKYRMAKYVPEFPEGKLE----KRSSLNDLPQIDVKATLQIKEAL 273
+++ GLTI+HVKSHLQKYR A+Y PE E E K +S+ D+ +D+K +++I +AL
Sbjct: 266 LNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVEITQAL 325
Query: 274 QLQLDVQRRLHEQLEIQRKLQLRIEEQGKHLQMLFDQQQKASKDHS 319
+LQ++VQ+RLHEQLEIQR LQL+IE+QG++LQM+F++QQK + S
Sbjct: 326 RLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDNKS 371
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 99/142 (69%), Gaps = 8/142 (5%)
Query: 176 TGPVITN--KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQ 233
+G V+T K R+RWT +LHE+FV+ V +LGG DKATPK I+++M +GLT++H+KSHLQ
Sbjct: 25 SGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ 84
Query: 234 KYRMAKYVPEFPEG----KLEKRSSLNDLPQ-IDVKATLQIKEALQLQLDVQRRLHEQLE 288
K+R+ K P G K R+S D+ + + + + + ++Q++VQRRLHEQLE
Sbjct: 85 KFRLGKQ-PHKEYGDHSTKEGSRASAMDIQRNVASSSGMMSRNMNEMQMEVQRRLHEQLE 143
Query: 289 IQRKLQLRIEEQGKHLQMLFDQ 310
+QR LQLRIE QGK++Q + ++
Sbjct: 144 VQRHLQLRIEAQGKYMQSILER 165
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 148 FDEHQDHRGYASHQEKQSPRFSSSSSFSTGPVITNKTRIRWTQDLHEKFVECVNRLGGAD 207
F+ H HR A + Q PRF++ R+RWT LH FV V LGG +
Sbjct: 139 FNLHNRHRRQA---QPQPPRFTAKRGVRA-------PRMRWTTTLHAHFVHAVQLLGGHE 188
Query: 208 KATPKAILKLMDSEGLTIFHVKSHLQKYRMAK 239
+ATPK++L+LMD + LT+ HVKSHLQ YR K
Sbjct: 189 RATPKSVLELMDVQDLTLAHVKSHLQMYRTIK 220
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 185 RIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRMAK 239
R+RWT +LH FV V+ LGG KATPK +LK+MD +GLTI HVKSHLQ YR ++
Sbjct: 25 RLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSR 79
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 127 NFYKSPEASCINPLGKQYSGPFDEHQDHRGYASHQEKQSPRFSSSSSFSTGPVITNKT-R 185
NF+ P S LG FD H R + F SSS G + + R
Sbjct: 58 NFFNKPLLS----LG------FDHHHQRRSNMFQPQIYGRDFKRSSSSMVGLKRSIRAPR 107
Query: 186 IRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRMAKYVPEFP 245
+RWT LH FV V LGG ++ATPK++L+LM+ + LT+ HVKSHLQ YR K +
Sbjct: 108 MRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKCTDKGS 167
Query: 246 --EGKLEKRS 253
EGK+EK +
Sbjct: 168 PGEGKVEKEA 177
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 185 RIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRMAK 239
R+RWT LH +FV V LGG ++ATPK++L+LMD + LT+ HVKSHLQ YR K
Sbjct: 221 RMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 275
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 185 RIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRMAK 239
R+RWT LH +FV V LGG ++ATPK++L+LMD + LT+ HVKSHLQ YR K
Sbjct: 215 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 269
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 185 RIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRMAK 239
R+RWT LH +FV V LGG ++ATPK++L+LMD + LT+ HVKSHLQ YR K
Sbjct: 326 RMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 380
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRMAKYVP 242
K R+ W+Q+LH+KFV V +LG DKA PK IL LM EGLT +V SHLQKYR+ Y+
Sbjct: 194 KPRVVWSQELHQKFVSAVQQLG-LDKAVPKKILDLMSIEGLTRENVASHLQKYRL--YLK 250
Query: 243 EFPEGK 248
+ EG+
Sbjct: 251 KIDEGQ 256
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 237
K R+ W+ +LH++FV VN+LG DKA PK IL++M+ GLT +V SHLQKYR+
Sbjct: 216 KPRVVWSVELHQQFVAAVNQLG-VDKAVPKKILEMMNVPGLTRENVASHLQKYRI 269
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 237
K R+ W+ +LH++FV VN+LG +KA PK IL+LM+ GLT +V SHLQKYR+
Sbjct: 237 KPRVVWSVELHQQFVAAVNQLG-VEKAVPKKILELMNVPGLTRENVASHLQKYRI 290
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 178 PVITNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 237
P + K+R+ W+ +LH++FV VN+LG DKA PK IL+LM+ GL+ +V SHLQK+R+
Sbjct: 195 PGNSKKSRVVWSIELHQQFVNAVNKLG-IDKAVPKRILELMNVPGLSRENVASHLQKFRL 253
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 237
K R+ WT +LH+KFV VN+LG +KA PK IL LM+ E LT +V SHLQK+R+
Sbjct: 195 KQRVVWTVELHKKFVAAVNQLG-YEKAMPKKILDLMNVEKLTRENVASHLQKFRL 248
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 178 PVITNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 237
P K R+ WT +LH KF+ V+ LG ++A PK IL LM+ + LT +V SHLQK+R+
Sbjct: 178 PTAQKKPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRV 236
Query: 238 A 238
A
Sbjct: 237 A 237
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 167 RFSSSSSFSTGPVITN----KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEG 222
++SSS+S + N K ++ WT +LH +FVE V +LG DKA P IL+LM
Sbjct: 133 KYSSSASSKNNRISNNEGKRKVKVDWTPELHRRFVEAVEQLG-VDKAVPSRILELMGVHC 191
Query: 223 LTIFHVKSHLQKYR 236
LT +V SHLQKYR
Sbjct: 192 LTRHNVASHLQKYR 205
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 180 ITNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYR 236
I K ++ WT +LH KFV+ V +LG DKA P IL++M+ + LT +V SHLQKYR
Sbjct: 144 IKKKPKVDWTPELHRKFVQAVEQLG-VDKAVPSRILEIMNVKSLTRHNVASHLQKYR 199
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 237
K+R+ WT LH +F+ VN LG DKA PK IL +M + LT V SHLQKYRM
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYRM 251
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 237
K+R+ WT LH +F+ VN LG DKA PK IL +M + LT V SHLQKYRM
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYRM 251
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 184 TRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRMAKYVPE 243
R+ W+ +LH KFV VN++G KA PK IL LM+ LT +V SHLQKYR+ Y+
Sbjct: 194 ARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRL--YLSR 251
Query: 244 FPEGK 248
+GK
Sbjct: 252 LEKGK 256
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 18/86 (20%)
Query: 155 RGYASHQEKQSPRFSSSSSFSTGPVITNKTRIRWTQDLHEKFVECVNRLGGADKATPKAI 214
+ H+E++SP T K R++WT +LH KF V ++G +KA PK I
Sbjct: 197 KNTCDHKEEKSP--------------TKKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTI 242
Query: 215 LKLMDSE----GLTIFHVKSHLQKYR 236
LK M E GLT +V SHLQKYR
Sbjct: 243 LKYMQEELNVQGLTRNNVASHLQKYR 268
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYR 236
K ++ WT +LH +FV+ V +LG DKA P IL+LM E LT ++ SHLQKYR
Sbjct: 215 KVKVDWTPELHRRFVQAVEQLG-IDKAVPSRILELMGIECLTRHNIASHLQKYR 267
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAI---LKLMDSEGLTIFHVKSHLQKYRM 237
K R+ WT++LH+KF+E + +GG +KA PK + L+ M EG+T +V SHLQK+R+
Sbjct: 215 KPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRI 272
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 181 TNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYR 236
T++ ++ WT +LH+KFV+ V +LG D+A P IL+LM LT +V SHLQK+R
Sbjct: 294 TSRKKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVGTLTRHNVASHLQKFR 348
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 186 IRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYR 236
+ WT +LH +FV+ V +LG DKA P IL++M + LT ++ SHLQKYR
Sbjct: 183 VDWTPELHRRFVQAVEQLG-IDKAVPSRILEIMGIDSLTRHNIASHLQKYR 232
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 237
K +I+WT LH+ F++ + +G DKA PK IL M LT +V SHLQKYR+
Sbjct: 222 KKKIQWTDSLHDLFLQAIRHIG-LDKAVPKKILAFMSVPYLTRENVASHLQKYRI 275
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYRM 237
K +I WT L + F++ + +G DK PK IL +M+ LT +V SHLQKYR+
Sbjct: 225 KKKIWWTNPLQDLFLQAIQHIG-YDKVVPKKILAIMNVPYLTRENVASHLQKYRL 278
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 188 WTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQKYR 236
W + H KF+ ++ LG D PK+IL++M+ LT V SHLQKY+
Sbjct: 227 WNSERHMKFIAAISILGEED-FRPKSILEIMNDPNLTHRQVGSHLQKYK 274
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 183 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGLTIFHVKSHLQ 233
K R+ W ++LH+ F+ V+ L G ++A PK IL +M + ++ +V SHLQ
Sbjct: 223 KRRVVWDEELHQNFLNAVDFL-GLERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q99LI8|HGS_MOUSE Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus
musculus GN=Hgs PE=1 SV=2
Length = 775
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 48/190 (25%)
Query: 145 SGPFDEHQDHRGYASHQEKQSPRFSSSSSFST--------GPVITNKTRI----RWTQDL 192
SGPF E+Q+ SH++ ++ S+F G ITN + + + +
Sbjct: 388 SGPFSEYQNGESEESHEQFLKALQNAVSTFVNRMKSNHMRGRSITNDSAVLSLFQSINTM 447
Query: 193 HEKFVECVNRL--------GGADKATPKAILKLMDSEGLTIFHVKSHLQKYRMAKYVPEF 244
H + +E +N+L G DK + ++ D+ G + H +K R A
Sbjct: 448 HPQLLELLNQLDERRLYYEGLQDK-----LAQIRDARGALSALREEHREKLRRAAE---- 498
Query: 245 PEGKLEKRSSLNDLPQIDVKATLQIKEALQLQLDVQRRLHEQLEIQRKLQL-RIEEQGKH 303
+ + QI+ A +L++ Q++ E LE+QR+L + R++EQ K
Sbjct: 499 -----------------EAERQRQIQLAQKLEIMRQKK-QEYLEVQRQLAIQRLQEQEKE 540
Query: 304 LQMLFDQQQK 313
QM +QQ++
Sbjct: 541 RQMRLEQQKQ 550
>sp|B2VGR6|SYI_ERWT9 Isoleucine--tRNA ligase OS=Erwinia tasmaniensis (strain DSM 17950 /
Et1/99) GN=ileS PE=3 SV=1
Length = 938
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 208 KATPKAILKLMDSEGLTIFHVKSHLQKYRMAKYVPEFPEGKLEKRSSLNDLPQIDVKATL 267
+ATP+ + MD +GL L++ + +++P++ + ++E + I + T
Sbjct: 416 RATPQWFIS-MDQKGLR----AQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTW 470
Query: 268 QIKEALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKHLQMLFDQQQKASKDHSKPQNLEKV 327
+ AL + D ++ + LE+ K+ LR+E+ G D ++ D N KV
Sbjct: 471 GVPMALFVHKDTEQLHPDSLELMEKVALRVEQDGIQAWWDLDARELMGAD---ADNYVKV 527
Query: 328 PE 329
P+
Sbjct: 528 PD 529
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 18/83 (21%)
Query: 178 PVITNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSEGL-TIFHVKSHLQKYR 236
P K R RWT+D HE+F+E + RL G +A ++ + G T ++SH QK+
Sbjct: 17 PYTITKQRERWTEDEHERFLEAL-RLYG------RAWQRIEEHIGTKTAVQIRSHAQKFF 69
Query: 237 MAKYVPEFPEGKLEKRSSLNDLP 259
KLEK + + +P
Sbjct: 70 T----------KLEKEAEVKGIP 82
>sp|Q9SLB7|LBD16_ARATH LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16
PE=2 SV=1
Length = 245
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 137 INPLGKQYSGPFDEHQDHRGYASHQEKQSPRFSSSSSFS-TGPVITNKTRIRWT 189
++P+G YS P++ HQ + G+ + SP+ S SFS T +T +R T
Sbjct: 145 VSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSNTSSDVTTTANVRET 198
>sp|A4IYN2|MNMG_FRATW tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Francisella tularensis subsp. tularensis (strain
WY96-3418) GN=mnmG PE=3 SV=1
Length = 627
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 238 AKYVPEFPEGKLEKRSSLNDL---PQIDVKATLQIKEA-LQLQLDVQRRLHEQLEIQRKL 293
A+ + +F + K+ + S+L DL P+ID QI E L LQ D + EQ+EI K
Sbjct: 493 ARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDA---VIEQIEISAKY 549
Query: 294 QLRIEEQGKHLQMLFDQQQKA 314
IE Q K ++ +QKA
Sbjct: 550 SGYIERQNKDIEKTATLEQKA 570
>sp|Q0BMJ8|MNMG_FRATO tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Francisella tularensis subsp. holarctica (strain
OSU18) GN=mnmG PE=3 SV=1
Length = 627
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 238 AKYVPEFPEGKLEKRSSLNDL---PQIDVKATLQIKEA-LQLQLDVQRRLHEQLEIQRKL 293
A+ + +F + K+ + S+L DL P+ID QI E L LQ D + EQ+EI K
Sbjct: 493 ARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDA---VIEQIEISAKY 549
Query: 294 QLRIEEQGKHLQMLFDQQQKA 314
IE Q K ++ +QKA
Sbjct: 550 SGYIERQNKDIEKTATLEQKA 570
>sp|Q2A464|MNMG_FRATH tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Francisella tularensis subsp. holarctica (strain LVS)
GN=mnmG PE=3 SV=1
Length = 627
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 238 AKYVPEFPEGKLEKRSSLNDL---PQIDVKATLQIKEA-LQLQLDVQRRLHEQLEIQRKL 293
A+ + +F + K+ + S+L DL P+ID QI E L LQ D + EQ+EI K
Sbjct: 493 ARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDA---VIEQIEISAKY 549
Query: 294 QLRIEEQGKHLQMLFDQQQKA 314
IE Q K ++ +QKA
Sbjct: 550 SGYIERQNKDIEKTATLEQKA 570
>sp|A7NBA3|MNMG_FRATF tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Francisella tularensis subsp. holarctica (strain
FTNF002-00 / FTA) GN=mnmG PE=3 SV=1
Length = 627
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 238 AKYVPEFPEGKLEKRSSLNDL---PQIDVKATLQIKEA-LQLQLDVQRRLHEQLEIQRKL 293
A+ + +F + K+ + S+L DL P+ID QI E L LQ D + EQ+EI K
Sbjct: 493 ARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDA---VIEQIEISAKY 549
Query: 294 QLRIEEQGKHLQMLFDQQQKA 314
IE Q K ++ +QKA
Sbjct: 550 SGYIERQNKDIEKTATLEQKA 570
>sp|A0Q753|MNMG_FRATN tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Francisella tularensis subsp. novicida (strain U112)
GN=mnmG PE=3 SV=1
Length = 627
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 238 AKYVPEFPEGKLEKRSSLNDL---PQIDVKATLQIKEALQLQLDVQ-RRLHEQLEIQRKL 293
A+ + +F + K+ + S+L DL P+ID QI E L L++Q + EQ+EI K
Sbjct: 493 ARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISE---LNLNLQDEAVIEQIEISAKY 549
Query: 294 QLRIEEQGKHLQMLFDQQQKA 314
IE Q K ++ +QKA
Sbjct: 550 SGYIERQNKDIEKTATLEQKA 570
>sp|O14964|HGS_HUMAN Hepatocyte growth factor-regulated tyrosine kinase substrate
OS=Homo sapiens GN=HGS PE=1 SV=1
Length = 777
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 54/218 (24%)
Query: 119 AVPLEIPWNFYKSPEASCINPLGKQYSGPFDEHQDHRGYA--SHQEKQSPRFSSSSSFST 176
A P + N ++ I P G GPF E Q H G + SH++ ++ ++F
Sbjct: 366 AAPTNVVENPLPETDSQPIPPSG----GPFSEPQFHNGESEESHEQFLKALQNAVTTFVN 421
Query: 177 --------GPVITNKTRI----RWTQDLHEKFVECVNRL--------GGADKATPKAILK 216
G ITN + + + +H + +E +N+L G DK + +
Sbjct: 422 RMKSNHMRGRSITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYYEGLQDK-----LAQ 476
Query: 217 LMDSEGLTIFHVKSHLQKYRMAKYVPEFPEGKLEKRSSLNDLPQIDVKATLQIKEALQLQ 276
+ D+ G + H +K R A + + QI+ A +L+
Sbjct: 477 IRDARGALSALREEHREKLRRAAE---------------------EAERQRQIQLAQKLE 515
Query: 277 LDVQRRLHEQLEIQRKLQL-RIEEQGKHLQMLFDQQQK 313
+ Q++ E LE+QR+L + R++EQ K QM +QQ++
Sbjct: 516 IMRQKK-QEYLEVQRQLAIQRLQEQEKERQMRLEQQKQ 552
>sp|Q5NFM8|MNMG_FRATT tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Francisella tularensis subsp. tularensis (strain SCHU
S4 / Schu 4) GN=mnmG PE=3 SV=1
Length = 627
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 238 AKYVPEFPEGKLEKRSSLNDL---PQIDVKATLQIKEA-LQLQLDVQRRLHEQLEIQRKL 293
A+ + +F + K+ + S+L DL P+ID QI E L LQ D + EQ+EI K
Sbjct: 493 ARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDA---VIEQIEISAKY 549
Query: 294 QLRIEEQGKHLQMLFDQQQKA 314
IE Q K ++ +QKA
Sbjct: 550 SGYIERQNKDIEKTATFEQKA 570
>sp|Q14H30|MNMG_FRAT1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Francisella tularensis subsp. tularensis (strain FSC
198) GN=mnmG PE=3 SV=1
Length = 627
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 238 AKYVPEFPEGKLEKRSSLNDL---PQIDVKATLQIKEA-LQLQLDVQRRLHEQLEIQRKL 293
A+ + +F + K+ + S+L DL P+ID QI E L LQ D + EQ+EI K
Sbjct: 493 ARDLEKFLDKKMTRESTLFDLLKRPEIDYSKLQQISELNLNLQDDA---VIEQIEISAKY 549
Query: 294 QLRIEEQGKHLQMLFDQQQKA 314
IE Q K ++ +QKA
Sbjct: 550 SGYIERQNKDIEKTATFEQKA 570
>sp|Q9JJ50|HGS_RAT Hepatocyte growth factor-regulated tyrosine kinase substrate
OS=Rattus norvegicus GN=Hgs PE=1 SV=1
Length = 776
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 49/191 (25%)
Query: 145 SGPFDE-HQDHRGYASHQEKQSPRFSSSSSFST--------GPVITNKTRI----RWTQD 191
SGPF E +Q+ SH++ ++ S+F G ITN + + +
Sbjct: 388 SGPFSEQYQNGESEESHEQFLKALQNAVSTFVNRMKSNHMRGRSITNDSAVLSLFQSINS 447
Query: 192 LHEKFVECVNRL--------GGADKATPKAILKLMDSEGLTIFHVKSHLQKYRMAKYVPE 243
H + +E +NRL G DK + ++ D+ G + H +K R A
Sbjct: 448 THPQLLELLNRLDERRLYYEGLQDK-----LAQIRDARGALSALREEHREKLRRAAE--- 499
Query: 244 FPEGKLEKRSSLNDLPQIDVKATLQIKEALQLQLDVQRRLHEQLEIQRKLQL-RIEEQGK 302
+ + QI+ A +L++ Q++ E LE+QR+L + R++EQ K
Sbjct: 500 ------------------EAERQRQIQLAQKLEIMRQKK-QEYLEVQRQLAIQRLQEQEK 540
Query: 303 HLQMLFDQQQK 313
QM +QQ++
Sbjct: 541 ERQMRLEQQKQ 551
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,621,573
Number of Sequences: 539616
Number of extensions: 5646686
Number of successful extensions: 17409
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 16962
Number of HSP's gapped (non-prelim): 443
length of query: 353
length of database: 191,569,459
effective HSP length: 118
effective length of query: 235
effective length of database: 127,894,771
effective search space: 30055271185
effective search space used: 30055271185
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)