Your job contains 1 sequence.
>018586
MDTEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLR
EHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQK
KISGAIDEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPV
TNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDL
DSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRL
YKRFRRQDHQVEEIGNQNTTGSFDSYKYKELEKMSPNELYQISKSDYRCWCLD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018586
(353 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2086839 - symbol:AT3G27970 species:3702 "Arabi... 1021 4.7e-103 1
TAIR|locus:2066406 - symbol:AT2G48100 species:3702 "Arabi... 1012 4.2e-102 1
TAIR|locus:2170533 - symbol:AT5G40310 species:3702 "Arabi... 993 4.4e-100 1
FB|FBgn0036405 - symbol:CG6833 species:7227 "Drosophila m... 290 1.4e-25 1
ZFIN|ZDB-GENE-120215-216 - symbol:si:ch73-209e20.4 "si:ch... 283 7.7e-25 1
MGI|MGI:2684957 - symbol:Rexo4 "REX4, RNA exonuclease 4 h... 269 4.6e-23 1
TAIR|locus:2086320 - symbol:AT3G15080 species:3702 "Arabi... 265 6.1e-23 1
UNIPROTKB|Q9GZR2 - symbol:REXO4 "RNA exonuclease 4" speci... 265 1.1e-22 1
SGD|S000005440 - symbol:REX4 "Putative RNA exonuclease po... 262 1.3e-22 1
ASPGD|ASPL0000065793 - symbol:AN10955 species:162425 "Eme... 259 2.6e-22 1
UNIPROTKB|F1N5B5 - symbol:REXO4 "Uncharacterized protein"... 260 3.0e-22 1
UNIPROTKB|F1PBR5 - symbol:REXO4 "Uncharacterized protein"... 260 3.6e-22 1
POMBASE|SPBC1604.09c - symbol:SPBC1604.09c "exoribonuclea... 249 3.0e-21 1
CGD|CAL0003518 - symbol:orf19.5220 species:5476 "Candida ... 247 4.9e-21 1
WB|WBGene00012465 - symbol:Y17G7B.12 species:6239 "Caenor... 247 4.9e-21 1
UNIPROTKB|H9KZR7 - symbol:H9KZR7 "Uncharacterized protein... 253 1.2e-20 1
RGD|1306220 - symbol:Rexo4 "REX4, RNA exonuclease 4 homol... 253 2.3e-20 1
UNIPROTKB|F1NQP7 - symbol:Gga.48606 "Uncharacterized prot... 253 2.4e-20 1
UNIPROTKB|I3L751 - symbol:REXO4 "Uncharacterized protein"... 248 1.6e-19 1
UNIPROTKB|E1C018 - symbol:AEN "Uncharacterized protein" s... 227 8.8e-19 1
UNIPROTKB|F1RHI9 - symbol:ISG20L2 "Uncharacterized protei... 236 1.6e-18 1
UNIPROTKB|H9L3P2 - symbol:H9L3P2 "Uncharacterized protein... 232 2.8e-18 1
UNIPROTKB|Q9H9L3 - symbol:ISG20L2 "Interferon-stimulated ... 235 3.2e-18 1
UNIPROTKB|E1BNM5 - symbol:ISG20 "Uncharacterized protein"... 222 3.4e-18 1
UNIPROTKB|G3N2Q8 - symbol:ISG20 "Uncharacterized protein"... 222 3.4e-18 1
UNIPROTKB|E2R7T9 - symbol:REXO4 "Uncharacterized protein"... 238 5.0e-18 1
UNIPROTKB|I3LB04 - symbol:ISG20 "Uncharacterized protein"... 220 5.8e-18 1
ZFIN|ZDB-GENE-070928-8 - symbol:isg20l2 "interferon stimu... 227 1.1e-17 1
MGI|MGI:1915298 - symbol:Aen "apoptosis enhancing nucleas... 229 1.3e-17 1
UNIPROTKB|Q2YDK1 - symbol:ISG20L2 "Interferon-stimulated ... 227 3.6e-17 1
UNIPROTKB|H9L3P1 - symbol:H9L3P1 "Uncharacterized protein... 223 6.2e-17 1
RGD|1305051 - symbol:Aen "apoptosis enhancing nuclease" s... 223 7.5e-17 1
UNIPROTKB|E2R2F5 - symbol:ISG20 "Uncharacterized protein"... 210 8.4e-17 1
UNIPROTKB|F6X5D6 - symbol:ISG20 "Uncharacterized protein"... 210 8.4e-17 1
UNIPROTKB|E2QS77 - symbol:ISG20L2 "Uncharacterized protei... 224 8.7e-17 1
UNIPROTKB|F1SRT3 - symbol:AEN "Uncharacterized protein" s... 221 1.1e-16 1
UNIPROTKB|F8WG03 - symbol:Aen "Apoptosis-enhancing nuclea... 223 1.3e-16 1
RGD|1359413 - symbol:Isg20l2 "interferon stimulated exonu... 223 1.7e-16 1
MGI|MGI:2140076 - symbol:Isg20l2 "interferon stimulated e... 222 2.3e-16 1
UNIPROTKB|Q8WTP8 - symbol:AEN "Apoptosis-enhancing nuclea... 218 2.9e-16 1
UNIPROTKB|J9PA78 - symbol:AEN "Uncharacterized protein" s... 214 9.5e-16 1
RGD|1306407 - symbol:Isg20 "interferon stimulated exonucl... 200 1.1e-15 1
UNIPROTKB|F1PWV6 - symbol:AEN "Uncharacterized protein" s... 214 1.3e-15 1
UNIPROTKB|F1MZX4 - symbol:LOC614749 "Uncharacterized prot... 212 1.8e-15 1
UNIPROTKB|Q5REE2 - symbol:AEN "Apoptosis-enhancing nuclea... 207 8.1e-15 1
UNIPROTKB|Q96AZ6 - symbol:ISG20 "Interferon-stimulated ge... 190 1.5e-14 1
TAIR|locus:2083163 - symbol:SDN1 "small RNA degrading nuc... 208 1.8e-14 1
UNIPROTKB|Q66UW5 - symbol:Isg20 "Interferon-stimulated ge... 185 5.6e-14 1
POMBASE|SPAC637.09 - symbol:SPAC637.09 "ribonuclease H70 ... 202 2.5e-13 1
ASPGD|ASPL0000067196 - symbol:AN7566 species:162425 "Emer... 197 1.1e-12 1
SGD|S000003508 - symbol:RNH70 "3'-5' exoribonuclease" spe... 186 1.3e-11 1
UNIPROTKB|G4MYV4 - symbol:MGG_15523 "Uncharacterized prot... 187 1.6e-11 1
TAIR|locus:2169717 - symbol:SDN2 "small RNA degrading nuc... 183 2.0e-11 1
MGI|MGI:1928895 - symbol:Isg20 "interferon-stimulated pro... 177 2.6e-11 1
WB|WBGene00013244 - symbol:Y56A3A.33 species:6239 "Caenor... 170 3.5e-10 1
UNIPROTKB|H0YMJ6 - symbol:AEN "Apoptosis-enhancing nuclea... 146 1.2e-09 1
DICTYBASE|DDB_G0291590 - symbol:rexo1 "RNA exonuclease 1"... 168 2.0e-09 1
TAIR|locus:2155563 - symbol:SDN3 "small RNA degrading nuc... 162 1.1e-08 1
RGD|1564472 - symbol:RGD1564472 "similar to Transcription... 158 1.4e-08 1
WB|WBGene00015462 - symbol:C05C8.5 species:6239 "Caenorha... 158 2.1e-08 1
FB|FBgn0261548 - symbol:CG42666 species:7227 "Drosophila ... 159 2.5e-08 1
POMBASE|SPAC1782.08c - symbol:rex3 "exonuclease Rex3 (pre... 154 5.1e-08 1
DICTYBASE|DDB_G0281327 - symbol:rexo4 "RNA exonuclease 4"... 146 1.2e-07 1
UNIPROTKB|F1P0Z1 - symbol:REXO1 "Uncharacterized protein"... 152 2.5e-07 1
DICTYBASE|DDB_G0269694 - symbol:pan2 "polyA specific ribo... 156 3.8e-07 2
UNIPROTKB|A0PJM3 - symbol:REXO1L2P "Putative exonuclease ... 143 4.8e-07 2
TAIR|locus:2145244 - symbol:AT5G25800 species:3702 "Arabi... 145 5.5e-07 1
UNIPROTKB|Q8IX06 - symbol:REXO1L1 "Exonuclease GOR" speci... 144 5.5e-07 2
UNIPROTKB|H0YMM4 - symbol:ISG20 "Interferon-stimulated ge... 121 6.3e-07 1
UNIPROTKB|F5GW92 - symbol:REXO1L10P "Protein REXO1L10P" s... 143 7.2e-07 2
TAIR|locus:2083153 - symbol:AT3G50090 species:3702 "Arabi... 128 1.2e-06 2
FB|FBgn0035707 - symbol:CG8368 species:7227 "Drosophila m... 139 3.3e-06 1
ZFIN|ZDB-GENE-061013-448 - symbol:zgc:152968 "zgc:152968"... 142 3.4e-06 1
UNIPROTKB|H3BLY5 - symbol:ISG20 "Interferon-stimulated ge... 112 6.0e-06 1
SGD|S000003062 - symbol:PAN2 "Essential subunit of the Pa... 138 8.1e-06 1
UNIPROTKB|F1SDH3 - symbol:LOC100525449 "Uncharacterized p... 137 1.2e-05 1
CGD|CAL0006310 - symbol:orf19.4948 species:5476 "Candida ... 130 1.5e-05 1
UNIPROTKB|Q8N1G1 - symbol:REXO1 "RNA exonuclease 1 homolo... 136 1.5e-05 1
CGD|CAL0004517 - symbol:orf19.4764 species:5476 "Candida ... 135 1.9e-05 1
UNIPROTKB|E1BDF8 - symbol:LOC788506 "Uncharacterized prot... 134 2.5e-05 1
UNIPROTKB|E2R2J6 - symbol:ZNF319 "Uncharacterized protein... 130 2.5e-05 1
MGI|MGI:1890618 - symbol:Zfp319 "zinc finger protein 319"... 130 2.6e-05 1
RGD|1306198 - symbol:Zfp319 "zinc finger protein 319" spe... 130 2.6e-05 1
UNIPROTKB|Q9P2F9 - symbol:ZNF319 "Zinc finger protein 319... 130 2.6e-05 1
UNIPROTKB|F6XDE4 - symbol:ZNF319 "Uncharacterized protein... 130 2.7e-05 1
UNIPROTKB|G3N1Z7 - symbol:ZNF319 "Uncharacterized protein... 130 2.7e-05 1
ZFIN|ZDB-GENE-030131-1650 - symbol:rexo1 "REX1, RNA exonu... 139 2.7e-05 2
CGD|CAL0006149 - symbol:orf19.6195 species:5476 "Candida ... 129 4.8e-05 1
MGI|MGI:1914182 - symbol:Rexo1 "REX1, RNA exonuclease 1 h... 133 4.9e-05 2
UNIPROTKB|F1N3K9 - symbol:LOC100335177 "Uncharacterized p... 124 6.4e-05 1
ZFIN|ZDB-GENE-030131-3113 - symbol:pan2 "PAN2 poly(A) spe... 130 6.8e-05 1
ZFIN|ZDB-GENE-090406-2 - symbol:znf319 "zinc finger prote... 126 7.4e-05 1
UNIPROTKB|E2QX02 - symbol:REXO1 "Uncharacterized protein"... 135 7.6e-05 2
UNIPROTKB|F1P3T2 - symbol:ZNF319 "Uncharacterized protein... 124 0.00010 1
UNIPROTKB|E1BR93 - symbol:LOC427001 "Uncharacterized prot... 126 0.00010 1
UNIPROTKB|F1P5D1 - symbol:LOC427001 "Uncharacterized prot... 126 0.00011 1
FB|FBgn0033352 - symbol:CG8232 species:7227 "Drosophila m... 128 0.00012 1
ASPGD|ASPL0000070457 - symbol:AN4357 species:162425 "Emer... 119 0.00016 2
UNIPROTKB|F1P8U5 - symbol:F1P8U5 "Uncharacterized protein... 120 0.00017 1
UNIPROTKB|H0Y669 - symbol:ZFP64 "Zinc finger protein 64 h... 98 0.00020 1
WARNING: Descriptions of 21 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2086839 [details] [associations]
symbol:AT3G27970 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:BT033110
EMBL:AB493636 IPI:IPI00533339 RefSeq:NP_189436.2 UniGene:At.50233
ProteinModelPortal:B3LFC1 SMR:B3LFC1 PaxDb:B3LFC1 PRIDE:B3LFC1
EnsemblPlants:AT3G27970.1 GeneID:822421 KEGG:ath:AT3G27970
TAIR:At3g27970 HOGENOM:HOG000237419 OMA:LPKVECA PhylomeDB:B3LFC1
ProtClustDB:CLSN2687545 Genevestigator:B3LFC1 Uniprot:B3LFC1
Length = 357
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 192/357 (53%), Positives = 249/357 (69%)
Query: 1 MDTEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLR 60
MD + + T R+KC ACY+QF + +HL+EHMKISYHS H+P C VC+K +SFESLR
Sbjct: 1 MDYRSSMESSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLR 60
Query: 61 EHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQK 120
EHL GPL K C IFS RGC CM I +SP+S H+E C S+ V T A
Sbjct: 61 EHLIGPLPKQECKNIFSLRGCRFCMTILESPNSRRIHQERCQFSS-VNSGLTTRMAALGL 119
Query: 121 KISGAIDEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPV 180
+ ID + R P+ VA+ C+MVGGGS+G+LDLCARVC+ DE +NVIFHTYV+P + V
Sbjct: 120 RDKAMIDYTSS-RSPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAV 178
Query: 181 TNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDL 240
T+YRYE TG+ E++++AMPLK+V+ KI E L NGE ++ GKAR+LVGHGL+HDL
Sbjct: 179 TSYRYETTGIRPENLRDAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDL 238
Query: 241 DSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRL 300
D L++ YP M+RDTAKY PLMKT+ +S+SLKYLT+ YLGYD+ G+ DPYEDCV+ MRL
Sbjct: 239 DRLQLEYPSSMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRL 298
Query: 301 YKRFRRQDHQVEEI----GNQNTTGSFDSYKYKELEKMSPNELYQISKSDYRCWCLD 353
Y R R Q H++E QN + +++ E E+MSP+E+ IS+SDY CWCLD
Sbjct: 299 YTRMRYQKHKIEAYPLAADAQNRSNQV-AWRQSEAERMSPDEMLSISRSDYYCWCLD 354
>TAIR|locus:2066406 [details] [associations]
symbol:AT2G48100 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=RCA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 EMBL:CP002685 GO:GO:0008270
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AC006072 EMBL:AF386965 EMBL:AY081469
IPI:IPI00546038 PIR:D84923 RefSeq:NP_001031560.1 RefSeq:NP_566124.1
RefSeq:NP_973715.1 UniGene:At.13478 ProteinModelPortal:Q9ZU79
SMR:Q9ZU79 EnsemblPlants:AT2G48100.1 EnsemblPlants:AT2G48100.2
EnsemblPlants:AT2G48100.3 GeneID:819422 KEGG:ath:AT2G48100
TAIR:At2g48100 InParanoid:Q9ZU79 OMA:MRLYKRM PhylomeDB:Q9ZU79
ProtClustDB:CLSN2917359 ArrayExpress:Q9ZU79 Genevestigator:Q9ZU79
Uniprot:Q9ZU79
Length = 344
Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
Identities = 198/358 (55%), Positives = 250/358 (69%)
Query: 1 MDTEAELPKRS--TARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFES 58
MD++ KR + RH+CVACYK F R++HL+EHMKISYHS+HQP+C VC K KSFES
Sbjct: 1 MDSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFES 60
Query: 59 LREHLTGP--LSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNA 116
+REHL P LSK +C IF+ RGC LC+ IF+ +L +HK C LS P P
Sbjct: 61 VREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPL-----GT 115
Query: 117 ESQKKISGAIDEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQP 176
+Q+ S ++ R KA+A+DCEMVGGG++GT+D CA VCLVD+DENVIF T+VQP
Sbjct: 116 STQRNPSSSLAGSRL----KAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQP 171
Query: 177 QLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLL-VGHG 235
LPVT+YR+E+TGLT+ED+K+ MPL+ V++++ L G++ DG RLL VGH
Sbjct: 172 LLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGGQN-------DGAGRLLLVGHD 224
Query: 236 LEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCV 295
L HD+ L++ YP H+LRDTAKY PLMKTNLVS SLKYLT++YLGY IQ G H+ YEDCV
Sbjct: 225 LRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCV 284
Query: 296 SVMRLYKRFRRQDHQVEEIGNQNTTGSFDSYKYKELEKMSPNELYQISKSDYRCWCLD 353
S MRLYKR R Q+H G G +S K +LEKM+ ELYQ S S+YRCWCLD
Sbjct: 285 SAMRLYKRMRDQEHVCS--GKAEGNG-LNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339
>TAIR|locus:2170533 [details] [associations]
symbol:AT5G40310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00096 InterPro:IPR006055 InterPro:IPR007087
InterPro:IPR012337 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 SMART:SM00479 Pfam:PF00929
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AB006702 HOGENOM:HOG000237419
ProtClustDB:CLSN2687545 IPI:IPI00536517 RefSeq:NP_198847.1
UniGene:At.55275 ProteinModelPortal:Q9FNE7 SMR:Q9FNE7
EnsemblPlants:AT5G40310.1 GeneID:834029 KEGG:ath:AT5G40310
TAIR:At5g40310 InParanoid:Q9FNE7 OMA:ITDESEN PhylomeDB:Q9FNE7
Genevestigator:Q9FNE7 Uniprot:Q9FNE7
Length = 348
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 183/345 (53%), Positives = 245/345 (71%)
Query: 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAH 71
T R+KC CY+QF +K+HL+EHM+ISYHSVH+P C +C K +SF+SLREHL GPL K
Sbjct: 3 TCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQE 62
Query: 72 CSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRT 131
C IFS RGC C+ I +SP++ H+E C LS V + A + + ID +
Sbjct: 63 CKNIFSIRGCRFCLTILESPNARRIHQERCQLSN-VTSGLMIRMAALGLRNNSTIDYTSS 121
Query: 132 CRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLT 191
R P+ VA+ C+MVGGGS+G+LDLCARVC+ DE ENV+FHTYV+P +PVTNYRYE+TG+
Sbjct: 122 -RSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIR 180
Query: 192 EEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHM 251
E++++AM LK + K+ E L NGE ++ +GKAR+LVGHGL++ LDSL++ Y M
Sbjct: 181 PENLRDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSM 240
Query: 252 LRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQV 311
+RDTA+Y PLMK++ +S+SLKYLT+ YLGYDI G+ DPYEDCV+ MRLY R R Q H+
Sbjct: 241 IRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQKHRA 300
Query: 312 EEIGNQNTT---GSFDSYKYKELEKMSPNELYQISKSDYRCWCLD 353
E + T +F +++ ELE+MSP EL +S+SDY CWCLD
Sbjct: 301 EAYPLASDTQNHNNFAAWRQNELERMSPEELLDLSRSDYYCWCLD 345
>FB|FBgn0036405 [details] [associations]
symbol:CG6833 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AY060760 RefSeq:NP_001189105.1
RefSeq:NP_648689.1 UniGene:Dm.3871 SMR:Q9VUC3 IntAct:Q9VUC3
STRING:Q9VUC3 EnsemblMetazoa:FBtr0075774 EnsemblMetazoa:FBtr0302433
GeneID:39559 KEGG:dme:Dmel_CG6833 UCSC:CG6833-RA
FlyBase:FBgn0036405 InParanoid:Q9VUC3 OMA:GQEIQTG OrthoDB:EOG4PK0R4
GenomeRNAi:39559 NextBio:814273 Uniprot:Q9VUC3
Length = 290
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 66/177 (37%), Positives = 104/177 (58%)
Query: 129 KRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVT 188
K+ + +AMDCEMVG G N D+ ARV +V+ +V+ YV+P+ VT+YR V+
Sbjct: 109 KKKAHRNRILAMDCEMVGVGHNTRDDMLARVSIVNRMGHVLLDKYVKPRKEVTDYRTSVS 168
Query: 189 GLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP 248
G+ +DI N V+++++++++ R+LVGHGL +DL L + +P
Sbjct: 169 GIRPQDIANGEDFAAVQNEVMKLIHG--------------RILVGHGLRNDLAVLGIRHP 214
Query: 249 DHMLRDTAKYRPLMK--TNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKR 303
H +RDT+ Y+PL K +N + SLK LT+ LG +IQ+G H+ ED + M +Y R
Sbjct: 215 FHDIRDTSHYKPLCKLISNTHTPSLKRLTKAVLGQEIQTGEHNSVEDARAAMGIYNR 271
>ZFIN|ZDB-GENE-120215-216 [details] [associations]
symbol:si:ch73-209e20.4 "si:ch73-209e20.4"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-120215-216 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 EMBL:FP243383 IPI:IPI00613534 RefSeq:XP_002665913.1
ProteinModelPortal:F1QJP9 Ensembl:ENSDART00000121769
GeneID:100333127 KEGG:dre:100333127 Bgee:F1QJP9 Uniprot:F1QJP9
Length = 418
Score = 283 (104.7 bits), Expect = 7.7e-25, P = 7.7e-25
Identities = 66/173 (38%), Positives = 95/173 (54%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
+AVAMDCEMVG G G + ARV LV+ I+ YV+P VT+YR V+G+ +DI
Sbjct: 232 RAVAMDCEMVGVGYKGEDSILARVSLVNHFGKCIYDKYVKPTEKVTDYRTAVSGIRPDDI 291
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
KN +K V+ ++ +IL K R+LVGH + +DL L +++P M+RDT
Sbjct: 292 KNGEDIKTVQKEVAQIL--------------KGRILVGHAIHNDLKILLLDHPKKMIRDT 337
Query: 256 AKYRPL-MKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQ 307
+Y+P K +L+ L R L +Q G H +D + MRLY R+Q
Sbjct: 338 QRYKPFRQKVKSSRPALRNLCRQILNVQVQQGEHSSVQDAQATMRLYTMVRKQ 390
>MGI|MGI:2684957 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2684957
GO:GO:0005730 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 EMBL:AK079733 EMBL:AK138894
EMBL:BC060147 IPI:IPI00407108 RefSeq:NP_997117.2 UniGene:Mm.291874
ProteinModelPortal:Q6PAQ4 SMR:Q6PAQ4 PhosphoSite:Q6PAQ4
PaxDb:Q6PAQ4 PRIDE:Q6PAQ4 DNASU:227656 Ensembl:ENSMUST00000114020
GeneID:227656 KEGG:mmu:227656 UCSC:uc008iwn.1 InParanoid:Q6PAQ4
OMA:EWESIAR ChiTaRS:REXO4 NextBio:378724 Bgee:Q6PAQ4
CleanEx:MM_REXO4 Genevestigator:Q6PAQ4
GermOnline:ENSMUSG00000052406 Uniprot:Q6PAQ4
Length = 432
Score = 269 (99.8 bits), Expect = 4.6e-23, P = 4.6e-23
Identities = 65/191 (34%), Positives = 105/191 (54%)
Query: 119 QKKISGAIDEKRTCRG-PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQ 177
QKK + ++++++ G KA+A+DCEMVG G G + ARV +V++ ++ YV+P
Sbjct: 234 QKKRTISLEKEQAFGGLTKALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPT 293
Query: 178 LPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLE 237
PVT+YR V+G+ E++K + VK ++ E+L K R+LVGH L
Sbjct: 294 EPVTDYRTAVSGIRPENLKQGEEFEVVKKEVAEML--------------KGRILVGHALH 339
Query: 238 HDLDSLRMNYPDHMLRDTAKYRPLM-KTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVS 296
+DL L +++P +RDT K++P + SLK L+ LG +Q H +D +
Sbjct: 340 NDLKVLFLDHPKKKIRDTQKFKPFRSRVKSGRPSLKRLSEKILGIRVQQAEHCSIQDAQA 399
Query: 297 VMRLYKRFRRQ 307
MRLY +R+
Sbjct: 400 AMRLYVMVKRE 410
>TAIR|locus:2086320 [details] [associations]
symbol:AT3G15080 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AY087954 EMBL:BT024904
EMBL:EU682310 EMBL:AK228883 IPI:IPI00522165 RefSeq:NP_566499.1
UniGene:At.39112 ProteinModelPortal:Q8LAA0 STRING:Q8LAA0
PaxDb:Q8LAA0 PRIDE:Q8LAA0 EnsemblPlants:AT3G15080.1 GeneID:820738
KEGG:ath:AT3G15080 TAIR:At3g15080 InParanoid:Q8LAA0 OMA:CPIEDAR
PhylomeDB:Q8LAA0 ProtClustDB:CLSN2688390 Genevestigator:Q8LAA0
Uniprot:Q8LAA0
Length = 275
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 71/220 (32%), Positives = 114/220 (51%)
Query: 89 DSPSSLI-KHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRTCRGPKAVAMDCEMVGG 147
++PSS++ K KE VP L+ ++ DE VAMDCEMVG
Sbjct: 46 ENPSSILGKRKERPDSEVDVPKINPLAPVNDDSSLT---DE---------VAMDCEMVGV 93
Query: 148 GSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDK 207
S GT RV LV++ NV++ +V+P V ++R ++G+ D++ A + + K
Sbjct: 94 -SQGTKSALGRVTLVNKWGNVLYDEFVRPVEHVVDFRTSISGIRPRDLRKAKDFRVAQTK 152
Query: 208 ILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLV 267
+ E++ K ++LVGH L +DL +L + +P +RDT +Y+P +K
Sbjct: 153 VAELI--------------KGKILVGHALHNDLKALLLTHPKKDIRDTGEYQPFLKGK-T 197
Query: 268 SHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQ 307
SLK+L LG DIQ+G H P +D + M LY++ R++
Sbjct: 198 RKSLKHLASEILGADIQNGEHCPIDDARAAMMLYQKNRKE 237
>UNIPROTKB|Q9GZR2 [details] [associations]
symbol:REXO4 "RNA exonuclease 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=NAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
EMBL:CH471090 GO:GO:0003700 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL158826 KO:K01175 EMBL:AF295774 EMBL:AF273304 EMBL:AL136894
EMBL:AK025493 EMBL:AK314333 EMBL:BC009274 IPI:IPI00010653
IPI:IPI00513877 RefSeq:NP_065118.2 UniGene:Hs.438409
ProteinModelPortal:Q9GZR2 SMR:Q9GZR2 IntAct:Q9GZR2 STRING:Q9GZR2
PhosphoSite:Q9GZR2 DMDM:71153418 SWISS-2DPAGE:Q9GZR2 PaxDb:Q9GZR2
PRIDE:Q9GZR2 DNASU:57109 Ensembl:ENST00000371935
Ensembl:ENST00000371942 Ensembl:ENST00000445916
Ensembl:ENST00000453165 Ensembl:ENST00000454825
Ensembl:ENST00000562216 Ensembl:ENST00000568937
Ensembl:ENST00000569763 Ensembl:ENST00000570226 GeneID:57109
KEGG:hsa:57109 UCSC:uc004cdm.3 CTD:57109 GeneCards:GC09M136271
HGNC:HGNC:12820 HPA:HPA047006 MIM:602930 neXtProt:NX_Q9GZR2
PharmGKB:PA37414 HOGENOM:HOG000231626 HOVERGEN:HBG000999
InParanoid:Q9GZR2 OMA:QKEVAEM OrthoDB:EOG4VX263 PhylomeDB:Q9GZR2
GenomeRNAi:57109 NextBio:62959 ArrayExpress:Q9GZR2 Bgee:Q9GZR2
CleanEx:HS_REXO4 Genevestigator:Q9GZR2 GermOnline:ENSG00000148300
Uniprot:Q9GZR2
Length = 422
Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 64/194 (32%), Positives = 109/194 (56%)
Query: 117 ESQKKISGAIDEKRTCRG-PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQ 175
+S+ +S ++ +++ G +A+A+DCEMVG G G + ARV +V++ ++ YV+
Sbjct: 222 QSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVK 281
Query: 176 PQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHG 235
P PVT+YR V+G+ E++K L+ V+ ++ E+L K R+LVGH
Sbjct: 282 PTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEML--------------KGRILVGHA 327
Query: 236 LEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSH--SLKYLTRTYLGYDIQSGVHDPYED 293
L +DL L +++P +RDT KY+P K+ + S SL+ L+ LG +Q H +D
Sbjct: 328 LHNDLKVLFLDHPKKKIRDTQKYKPF-KSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQD 386
Query: 294 CVSVMRLYKRFRRQ 307
+ MRLY +++
Sbjct: 387 AQAAMRLYVMVKKE 400
>SGD|S000005440 [details] [associations]
symbol:REX4 "Putative RNA exonuclease possibly involved in
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005622 "intracellular" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IGI]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 SGD:S000005440
Pfam:PF00929 GO:GO:0005730 EMBL:BK006948 GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0008408
GO:GO:0006364 KO:K01175 GO:GO:0000027 EMBL:Z74822 OrthoDB:EOG4TB7M4
PIR:S66773 RefSeq:NP_014561.1 ProteinModelPortal:Q08237 SMR:Q08237
DIP:DIP-5458N IntAct:Q08237 MINT:MINT-543211 STRING:Q08237
PaxDb:Q08237 EnsemblFungi:YOL080C GeneID:854075 KEGG:sce:YOL080C
CYGD:YOL080c OMA:ALMLSHP NextBio:975698 Genevestigator:Q08237
GermOnline:YOL080C Uniprot:Q08237
Length = 289
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 63/178 (35%), Positives = 97/178 (54%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
K +AMDCE VG G G AR+ +V+ +V+ +V+P+ V +R V+G+ E +
Sbjct: 120 KYIAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHM 179
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
KNA+ KE + K +IL + R+LVGH L+HDL++L +++P +LRDT
Sbjct: 180 KNAITFKEAQKKTADIL--------------EGRILVGHALKHDLEALMLSHPKSLLRDT 225
Query: 256 AKYRPLMKTNLVSH--SLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQV 311
+++ P K SLK LTR L IQ G H ED + M LYK+ + + ++
Sbjct: 226 SRHLPFRKLYAKGKTPSLKKLTREVLKISIQEGEHSSVEDARATMLLYKKEKTEFEKI 283
>ASPGD|ASPL0000065793 [details] [associations]
symbol:AN10955 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:BN001304 GO:GO:0004527
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
ProteinModelPortal:C8VBH1 EnsemblFungi:CADANIAT00000588 OMA:KHMAEAR
Uniprot:C8VBH1
Length = 299
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 66/196 (33%), Positives = 108/196 (55%)
Query: 115 NAESQKKISGAIDEKRTCRGP-----KAVAMDCEMVGGGSNGTLDLC-ARVCLVDEDENV 168
NA + + + + + R P K +AMDCEMVG G + D ARV +V+ + +
Sbjct: 77 NASANETSNAVVSRENEGRSPNVEIGKYIAMDCEMVGIGPDPDNDSALARVSIVNYNGDQ 136
Query: 169 IFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKA 228
++ +YV+P+ VT++R V+G+ + + A L++V+ ++ EIL +
Sbjct: 137 VYDSYVRPKEMVTDWRTHVSGILPKHMAEARSLEQVQKEVAEIL--------------EG 182
Query: 229 RLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKT-NLVSHSLKYLTRTYLGYDIQSGV 287
R+LVGH L +DLD+L +++P +RDT+K+ P K S LK L +LG +IQ+G
Sbjct: 183 RILVGHALRNDLDALLLSHPKRDIRDTSKHPPYRKVAGGGSPRLKILASEFLGLNIQAGA 242
Query: 288 HDPYEDCVSVMRLYKR 303
H ED + M LY+R
Sbjct: 243 HSSMEDAKATMLLYRR 258
>UNIPROTKB|F1N5B5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:DAAA02032345
EMBL:DAAA02032346 IPI:IPI01000627 Ensembl:ENSBTAT00000026283
Uniprot:F1N5B5
Length = 402
Score = 260 (96.6 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 67/191 (35%), Positives = 100/191 (52%)
Query: 119 QKKISGAIDEKRTCRG-PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQ 177
Q + S + ++R G KA+AMDCEMVG G G + ARV LV++ ++ +V+P
Sbjct: 206 QSESSSTLVKERPFGGLTKALAMDCEMVGVGPEGEESVVARVSLVNQHGRCVYDKHVKPT 265
Query: 178 LPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLE 237
PVT+YR V+G+ D+ + V+ ++ E+L K R+LVGH L
Sbjct: 266 QPVTDYRTAVSGVRPADLAQGEEFEVVQREVAELL--------------KGRILVGHALH 311
Query: 238 HDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSH--SLKYLTRTYLGYDIQSGVHDPYEDCV 295
+DL +L + +P +RDT KY+P +T + S SLK L LG +Q H +D
Sbjct: 312 NDLKALFLGHPKKKIRDTQKYKPF-RTQVKSGRPSLKLLAERILGIQVQQAEHCSVQDAQ 370
Query: 296 SVMRLYKRFRR 306
MRLY +R
Sbjct: 371 VAMRLYVLVKR 381
>UNIPROTKB|F1PBR5 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AAEX03006772
Ensembl:ENSCAFT00000031428 Uniprot:F1PBR5
Length = 411
Score = 260 (96.6 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 61/168 (36%), Positives = 93/168 (55%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
+A+AMDCEMVG G G + ARV +V++ ++ YV+P PVT+YR V+G+ E++
Sbjct: 231 RALAMDCEMVGAGPKGEESVAARVSIVNQYGKCVYDKYVKPTQPVTDYRTAVSGIRPENL 290
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
K + V+ ++ ++L K R+LVGH L +DL L +++P +RDT
Sbjct: 291 KQGEKFEVVQKEVADML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDT 336
Query: 256 AKYRPLMKTNLVSH--SLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLY 301
KY+P K+ + S SLK L LG +Q H +D + MRLY
Sbjct: 337 QKYKPF-KSQVKSGRPSLKLLAERILGIQVQQAEHCSIQDAQAAMRLY 383
>POMBASE|SPBC1604.09c [details] [associations]
symbol:SPBC1604.09c "exoribonuclease Rex4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPBC1604.09c Pfam:PF00929 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006364 KO:K01175 OMA:NDIPESQ
PIR:T39505 RefSeq:NP_596631.1 ProteinModelPortal:O94375
STRING:O94375 EnsemblFungi:SPBC1604.09c.1 GeneID:2540203
KEGG:spo:SPBC1604.09c OrthoDB:EOG4TB7M4 NextBio:20801335
Uniprot:O94375
Length = 260
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 83/274 (30%), Positives = 142/274 (51%)
Query: 50 QKLSKSFESLREHLTGPLSKAHCSG---IFSDRGCNLCMNIFDSPSSLIKHKEACSLSAP 106
+KL K +S + +G + K H + + S +G N N ++ +S I K+ ++
Sbjct: 7 EKLKKKLDSAK---SGRVEKKHSNEKKYLKSVKGKN---N--ENENSYIVDKKR--MNEL 56
Query: 107 VPFEKTLSNAESQKKISGAIDEKRTCRGP------KAVAMDCEMVGGGSNGTLDLCARVC 160
F K ESQ + +D + R K +AMDCEMVG + + + ARV
Sbjct: 57 KKFAKENDIPESQVLDAYGVDASKLTRKTNLETLGKYIAMDCEMVGVADD--MSVLARVS 114
Query: 161 LVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGR 220
+V+ +V++ TYV+P+ VT++R V+G+ +++A ++V+ ++ +IL+N
Sbjct: 115 IVNYHGHVVYDTYVRPKEKVTDWRTWVSGVKSFHMRDAPSFEKVQAEVAKILDN------ 168
Query: 221 LMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAK---YRPLMKTNLVSHSLKYLTRT 277
R+LVGH + +DL L +++P M+RDT++ YR L K + LK L
Sbjct: 169 --------RVLVGHAVHNDLKVLLLSHPRRMIRDTSRFSGYRKLAKGR--TPGLKKLAEV 218
Query: 278 YLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQV 311
LG DIQSG H +D + M LYK+ +++ +V
Sbjct: 219 ILGRDIQSGQHSSVQDAQATMELYKKVKKEMDEV 252
>CGD|CAL0003518 [details] [associations]
symbol:orf19.5220 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 CGD:CAL0003518
Pfam:PF00929 GO:GO:0005634 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006364 KO:K01175 EMBL:AACQ01000070 EMBL:AACQ01000071
RefSeq:XP_716289.1 RefSeq:XP_716353.1 ProteinModelPortal:Q5A3Q0
STRING:Q5A3Q0 GeneID:3641941 GeneID:3642012 KEGG:cal:CaO19.12687
KEGG:cal:CaO19.5220 Uniprot:Q5A3Q0
Length = 285
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 64/193 (33%), Positives = 106/193 (54%)
Query: 127 DEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYE 186
D ++ G K VA+DCE VG G +G AR+ +++ V+ TYV+PQ VT++R
Sbjct: 107 DSRKLDPG-KYVAIDCEFVGIGKDGEESALARISIINYYGVVLLDTYVRPQERVTDWRTW 165
Query: 187 VTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMN 246
V+G+ +++A+ K + K +E++NN ++LVGH + +DLD L ++
Sbjct: 166 VSGIQSYHMQDAIDFKTAQLKTMELINN--------------KILVGHAVNNDLDILFLS 211
Query: 247 YPDHMLRDTAKYRPLMK-TNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFR 305
+P M+RDT K+ + S SLK L + ++ DIQ G H ED + M L++ F+
Sbjct: 212 HPKSMIRDTCKFPKFREIAGGKSPSLKKLIKHFIQVDIQIGQHSSVEDARATMLLFRLFK 271
Query: 306 RQDHQVEEIGNQN 318
R+ Q + N+N
Sbjct: 272 REIEQ--SMRNRN 282
>WB|WBGene00012465 [details] [associations]
symbol:Y17G7B.12 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:AL023828 PIR:T26504 RefSeq:NP_496560.1
ProteinModelPortal:Q9XXI3 SMR:Q9XXI3 STRING:Q9XXI3 PaxDb:Q9XXI3
EnsemblMetazoa:Y17G7B.12.1 EnsemblMetazoa:Y17G7B.12.2 GeneID:174842
KEGG:cel:CELE_Y17G7B.12 UCSC:Y17G7B.12 CTD:174842
WormBase:Y17G7B.12 InParanoid:Q9XXI3 OMA:TAKCTIL NextBio:885742
Uniprot:Q9XXI3
Length = 269
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 57/176 (32%), Positives = 100/176 (56%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
K +A+DCE VG G GT D+ AR+ +V+E +++ +V+P VT++R V+G+ E++
Sbjct: 101 KVIAIDCEYVGAGMGGTTDILARISIVNELGKIVYDKFVKPTEKVTDFRTAVSGIRPENM 160
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
A+P + ++ +++ DG R+++GH + +D L++N+ + RDT
Sbjct: 161 IKAIPFDRAQTEVSKLI------------DG--RIVIGHAVHNDFRVLKLNHIRKLTRDT 206
Query: 256 AKYRPLMKTNLVSH----SLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQ 307
AK ++K N+ +H SLK L + LG +IQ G HD D +RLY+ ++Q
Sbjct: 207 AKCT-ILK-NMANHHGTPSLKKLAKEVLGIEIQRGEHDSITDARVALRLYEAVKKQ 260
>UNIPROTKB|H9KZR7 [details] [associations]
symbol:H9KZR7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02075373
Ensembl:ENSGALT00000017760 OMA:PTESDIW Uniprot:H9KZR7
Length = 379
Score = 253 (94.1 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 64/191 (33%), Positives = 100/191 (52%)
Query: 113 LSNAESQKKISGAIDEKRTCRG-PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFH 171
L +S++ + + ++++ G +AVAMDCEMVG G +G + ARV +V+ I+
Sbjct: 180 LEAGQSKQSVEQVLVKEKSSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNLFGKCIYD 239
Query: 172 TYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLL 231
YV+P VT+YR V+G+ E +K K V+ ++ +ILN R+L
Sbjct: 240 KYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADILNG--------------RIL 285
Query: 232 VGHGLEHDLDSLRMNYPDHMLRDTAKYRPL-MKTNLVSHSLKYLTRTYLGYDIQSGVHDP 290
VGH L +DL L +++P +RDT KY+P + SLK L L +Q+ H
Sbjct: 286 VGHALHNDLKVLFLDHPKKKIRDTQKYKPFRQRVKNARPSLKLLCDRLLDVQVQTSEHCS 345
Query: 291 YEDCVSVMRLY 301
+D + MRLY
Sbjct: 346 IQDAQAAMRLY 356
>RGD|1306220 [details] [associations]
symbol:Rexo4 "REX4, RNA exonuclease 4 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1306220 GO:GO:0005730 GO:GO:0003676 GO:GO:0004527
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 KO:K01175 CTD:57109
HOGENOM:HOG000231626 HOVERGEN:HBG000999 OrthoDB:EOG4VX263
EMBL:BC161820 IPI:IPI00563200 RefSeq:NP_001029056.1
UniGene:Rn.116879 Ensembl:ENSRNOT00000042289 GeneID:311826
KEGG:rno:311826 UCSC:RGD:1306220 NextBio:664229
Genevestigator:B1WBN4 Uniprot:B1WBN4
Length = 409
Score = 253 (94.1 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 60/173 (34%), Positives = 91/173 (52%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
KA+A+DCEMVG G G + ARV +V++ ++ YV+P PVT+YR V+G+ E++
Sbjct: 229 KALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENL 288
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
K + VK ++ +L K R+LVGH L +DL L + +P +RDT
Sbjct: 289 KQGEEFEVVKKEVAAML--------------KGRILVGHALRNDLKVLFLEHPKKKIRDT 334
Query: 256 AKYRPLMK-TNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQ 307
K++P SLK L+ LG +Q H +D + MRLY +R+
Sbjct: 335 QKFKPFRSLVKSARPSLKQLSEKILGLRVQQAEHCSVQDAQAAMRLYIMVKRK 387
>UNIPROTKB|F1NQP7 [details] [associations]
symbol:Gga.48606 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AADN02026478
IPI:IPI00594596 Ensembl:ENSGALT00000005016 Uniprot:F1NQP7
Length = 414
Score = 253 (94.1 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 64/191 (33%), Positives = 100/191 (52%)
Query: 113 LSNAESQKKISGAIDEKRTCRG-PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFH 171
L +S++ + + ++++ G +AVAMDCEMVG G +G + ARV +V+ I+
Sbjct: 215 LEAGQSKQSVEQVLVKEKSSGGLTRAVAMDCEMVGVGPSGEDSIVARVSIVNLFGKCIYD 274
Query: 172 TYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLL 231
YV+P VT+YR V+G+ E +K K V+ ++ +ILN R+L
Sbjct: 275 KYVKPTEEVTDYRTAVSGIRPEHLKTGEDFKTVQKEVADILNG--------------RIL 320
Query: 232 VGHGLEHDLDSLRMNYPDHMLRDTAKYRPL-MKTNLVSHSLKYLTRTYLGYDIQSGVHDP 290
VGH L +DL L +++P +RDT KY+P + SLK L L +Q+ H
Sbjct: 321 VGHALHNDLKVLFLDHPKKKIRDTQKYKPFRQRVKNARPSLKLLCDRLLDVQVQTSEHCS 380
Query: 291 YEDCVSVMRLY 301
+D + MRLY
Sbjct: 381 IQDAQAAMRLY 391
>UNIPROTKB|I3L751 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005730 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:FP565513
Ensembl:ENSSSCT00000028732 Uniprot:I3L751
Length = 421
Score = 248 (92.4 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 61/174 (35%), Positives = 93/174 (53%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
+A+A+DCEMVG G G + ARV LV++ ++ YV+P PVT+YR V+G+ E++
Sbjct: 241 RALALDCEMVGVGPQGDESMLARVSLVNQFGKCVYDKYVKPTQPVTDYRTAVSGIRPENL 300
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
+ V+ ++ +L K R+LVGH L +DL L + +P +RDT
Sbjct: 301 AQGEEFEIVQKEVAALL--------------KGRILVGHALHNDLKVLFLGHPKKKVRDT 346
Query: 256 AKYRPLMKTNLVSH--SLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQ 307
KYRP ++ + S SLK L LG +Q H +D + MRLY +R+
Sbjct: 347 QKYRPF-RSQVKSGRPSLKLLAEKILGLPVQQAEHCSVQDAQAAMRLYISVKRE 399
>UNIPROTKB|E1C018 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02041516 IPI:IPI00577225
ProteinModelPortal:E1C018 Ensembl:ENSGALT00000010894
NextBio:20819091 Uniprot:E1C018
Length = 301
Score = 227 (85.0 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 64/190 (33%), Positives = 99/190 (52%)
Query: 122 ISGAIDEKRTC--RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLP 179
+ A+ + C R K VA+DCEMVG G G AR +V D +VI+ YV P LP
Sbjct: 81 VGNAVTGVQLCPPRPNKYVAIDCEMVGTGPRGRQSELARCSIVSYDGDVIYDKYVLPLLP 140
Query: 180 VTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHD 239
V ++R +G+T+ +++A+P + +++IL+IL K R++VGH + +D
Sbjct: 141 VVDFRTRWSGITKRHMESAIPFRAAQEEILKIL--------------KDRIVVGHAIHND 186
Query: 240 LDSLRMNYPDHMLRDTAKYRPLM--KTNL---VSHSLKYLTRTYLGYDIQSGV--HDPYE 292
+L+ +P RDT++ PL+ + L + SLK L R L IQ G H E
Sbjct: 187 FQALKYFHPKERTRDTSRI-PLLNQRAGLPPGANASLKSLARHLLQKKIQVGCKGHSSVE 245
Query: 293 DCVSVMRLYK 302
D + M LY+
Sbjct: 246 DARTAMELYR 255
>UNIPROTKB|F1RHI9 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:GTGPKGH EMBL:CU582900
RefSeq:XP_001924782.1 UniGene:Ssc.54513 Ensembl:ENSSSCT00000007088
GeneID:100157573 KEGG:ssc:100157573 Uniprot:F1RHI9
Length = 343
Score = 236 (88.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 67/197 (34%), Positives = 104/197 (52%)
Query: 114 SNAESQKKISGAIDEKRTCRGP-KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHT 172
+ A S+KK SGA +GP K VA+DCEMVG G G + AR +V+ + +V++
Sbjct: 150 TQAHSEKKYSGASQ-----KGPSKMVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDE 204
Query: 173 YVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLV 232
Y+ P + +YR +G+ ++ + NA P K + +IL+IL TG+++ V
Sbjct: 205 YILPPCHIVDYRTRWSGIRKQHMVNATPFKIARSQILKIL-----TGKIV---------V 250
Query: 233 GHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNL-----VSHSLKYLTRTYLGYDIQSGV 287
GH + +D +L+ +P + RDT+ + PL+ + SLK LT+ L DIQ G
Sbjct: 251 GHAIHNDFKALQYFHPKSLTRDTS-HIPLLNRKADCPENATMSLKRLTKKLLDRDIQVGK 309
Query: 288 --HDPYEDCVSVMRLYK 302
H ED + M LYK
Sbjct: 310 SGHSSVEDAQATMELYK 326
>UNIPROTKB|H9L3P2 [details] [associations]
symbol:H9L3P2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040831 OMA:PTEPIVD Uniprot:H9L3P2
Length = 328
Score = 232 (86.7 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 73/225 (32%), Positives = 112/225 (49%)
Query: 96 KHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRTCRGP-----------KAVAMDCEM 144
K + +A VPF T K + AID K+ R P K VA+DCEM
Sbjct: 102 KRTQGAKKAAKVPFRSTGLPPPPSKLV--AIDLKKPLRAPVRATGLPPPPSKLVAIDCEM 159
Query: 145 VGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEV 204
VG G G AR +V + +V++ +YV+P P+ +YR +G+ ++ + NA+P +
Sbjct: 160 VGTGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRKKHMVNAVPFCKA 219
Query: 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKT 264
+ +IL+IL+ GK ++VGH + +D +L+ ++P + RDT+K PL+
Sbjct: 220 QREILKILS------------GK--VVVGHAVHNDFKALKYSHPKELTRDTSKI-PLLNQ 264
Query: 265 N-----LVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYK 302
V+ SLK L + L DIQ G H ED + M LYK
Sbjct: 265 KGGFPENVAISLKRLAKELLHKDIQVGKSGHCSVEDARTTMELYK 309
>UNIPROTKB|Q9H9L3 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:CH471121 KO:K01175 EMBL:AL590666 CTD:81875 HOVERGEN:HBG107986
OMA:GTGPKGH OrthoDB:EOG4H4641 EMBL:AY391837 EMBL:AK022733
EMBL:BC000575 IPI:IPI00008963 RefSeq:NP_112242.1 UniGene:Hs.301904
ProteinModelPortal:Q9H9L3 IntAct:Q9H9L3 MINT:MINT-1457372
STRING:Q9H9L3 PhosphoSite:Q9H9L3 DMDM:42559527 SWISS-2DPAGE:Q9H9L3
PaxDb:Q9H9L3 PeptideAtlas:Q9H9L3 PRIDE:Q9H9L3 DNASU:81875
Ensembl:ENST00000313146 Ensembl:ENST00000368219 GeneID:81875
KEGG:hsa:81875 UCSC:uc001fps.1 GeneCards:GC01M156691
HGNC:HGNC:25745 HPA:HPA028005 MIM:611930 neXtProt:NX_Q9H9L3
PharmGKB:PA142671650 InParanoid:Q9H9L3 PhylomeDB:Q9H9L3
ChiTaRS:ISG20L2 GenomeRNAi:81875 NextBio:72218 Bgee:Q9H9L3
CleanEx:HS_ISG20L2 Genevestigator:Q9H9L3 GermOnline:ENSG00000143319
Uniprot:Q9H9L3
Length = 353
Score = 235 (87.8 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 66/195 (33%), Positives = 104/195 (53%)
Query: 114 SNAESQKKISGAIDEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTY 173
+ A S+ K SGA ++ R K VA+DCEMVG G G + AR +V+ + +V++ Y
Sbjct: 160 TQAHSENKCSGA--SQKLPR--KMVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEY 215
Query: 174 VQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVG 233
+ P + +YR +G+ ++ + NA P K + +IL+IL TG+++ VG
Sbjct: 216 ILPPCHIVDYRTRWSGIRKQHMVNATPFKIARGQILKIL-----TGKIV---------VG 261
Query: 234 HGLEHDLDSLRMNYPDHMLRDTAKYRPL-MKTNLVSH---SLKYLTRTYLGYDIQSGV-- 287
H + +D +L+ +P + RDT+ PL K + + SLK+LT+ L DIQ G
Sbjct: 262 HAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKHLTKKLLNRDIQVGKSG 321
Query: 288 HDPYEDCVSVMRLYK 302
H ED + M LYK
Sbjct: 322 HSSVEDAQATMELYK 336
>UNIPROTKB|E1BNM5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 CTD:3669 KO:K12579 EMBL:DAAA02052106 IPI:IPI00695516
RefSeq:XP_002696560.1 RefSeq:XP_583075.1 UniGene:Bt.22275
ProteinModelPortal:E1BNM5 Ensembl:ENSBTAT00000019639 GeneID:506604
KEGG:bta:506604 NextBio:20867677 Uniprot:E1BNM5
Length = 171
Score = 222 (83.2 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 62/180 (34%), Positives = 96/180 (53%)
Query: 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
R VAMDCEMVG G L AR LVD +V++ +++P+ +T+YR V+G+T
Sbjct: 3 RSADVVAMDCEMVGLGPFRESGL-ARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITA 61
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+++ A P + +IL++L K +L+VGH L+HD +L+ N D+ +
Sbjct: 62 RNMEGATPFAVARLEILQVL--------------KGKLVVGHDLKHDFKALKENMSDYAI 107
Query: 253 RDTAKYRPLMKTNLVSH----SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRR 306
DTA R L + + + SL+ L++ LG IQ V H+ ED + M LY+ RR
Sbjct: 108 YDTAADRRLWREAGLQYCRRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMELYRISRR 167
>UNIPROTKB|G3N2Q8 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:DAAA02052106
Ensembl:ENSBTAT00000065058 Uniprot:G3N2Q8
Length = 181
Score = 222 (83.2 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 62/180 (34%), Positives = 96/180 (53%)
Query: 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
R VAMDCEMVG G L AR LVD +V++ +++P+ +T+YR V+G+T
Sbjct: 3 RSADVVAMDCEMVGLGPFRESGL-ARCSLVDYHGSVLYDKFIRPEGDITDYRTPVSGITA 61
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+++ A P + +IL++L K +L+VGH L+HD +L+ N D+ +
Sbjct: 62 RNMEGATPFAVARLEILQVL--------------KGKLVVGHDLKHDFKALKENMSDYAI 107
Query: 253 RDTAKYRPLMKTNLVSH----SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRR 306
DTA R L + + + SL+ L++ LG IQ V H+ ED + M LY+ RR
Sbjct: 108 YDTAADRRLWREAGLQYCRRVSLRVLSQRLLGRRIQDSVLGHNSVEDARAAMELYRISRR 167
>UNIPROTKB|E2R7T9 [details] [associations]
symbol:REXO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 OMA:QKEVAEM EMBL:AAEX03006772
Ensembl:ENSCAFT00000035775 Uniprot:E2R7T9
Length = 447
Score = 238 (88.8 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 59/167 (35%), Positives = 91/167 (54%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
+A+AMDCEMVG G G + ARV +V++ ++ YV+P PVT+YR V+G+ E++
Sbjct: 244 RALAMDCEMVGAGPKGEESVAARVSIVNQYGKCVYDKYVKPTQPVTDYRTAVSGIRPENL 303
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
K + V+ ++ ++L K R+LVGH L +DL L +++P +RDT
Sbjct: 304 KQGEKFEVVQKEVADML--------------KGRILVGHALHNDLKVLFLDHPKKKIRDT 349
Query: 256 AKYRPLMKTNLVSH--SLKYLTRTYLGYDIQSGVHDPYEDCVSVMRL 300
KY+P K+ + S SLK L LG +Q H D + + RL
Sbjct: 350 QKYKPF-KSQVKSGRPSLKLLAERILGIQVQQAEH--CSDNIQLERL 393
>UNIPROTKB|I3LB04 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016605 "PML body" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0008310 "single-stranded DNA specific
3'-5' exodeoxyribonuclease activity" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IEA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0000175 GO:GO:0000738
GO:GO:0008310 OMA:ARCSLVD EMBL:FP017226 Ensembl:ENSSSCT00000024643
Uniprot:I3LB04
Length = 174
Score = 220 (82.5 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 62/180 (34%), Positives = 97/180 (53%)
Query: 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
RG VAMDCEMVG G L AR LVD V++ +++P+ +T+YR V+G+T
Sbjct: 3 RGMDVVAMDCEMVGLGPFRESGL-ARCSLVDFHGTVLYDKFIRPEGEITDYRTPVSGITA 61
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+++ A P + +IL++L K +L+VGH L+HD +L+ N ++ +
Sbjct: 62 RNMEGATPFAVARLEILQLL--------------KGKLVVGHDLKHDFKALKENMSNYTI 107
Query: 253 RDTAKYRPLMKTNLVSH----SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRR 306
DTA+ R L + + + SL+ L++ LG IQ V H+ ED + M LY+ RR
Sbjct: 108 YDTAQDRLLWREADLHYCRRVSLRLLSQRLLGRRIQDSVLGHNSVEDARATMELYRLSRR 167
>ZFIN|ZDB-GENE-070928-8 [details] [associations]
symbol:isg20l2 "interferon stimulated exonuclease
gene 20-like 2" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-070928-8 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 CTD:81875
OrthoDB:EOG4H4641 EMBL:AL954306 EMBL:BC152518 IPI:IPI00931450
RefSeq:NP_001096663.1 UniGene:Dr.87096 Ensembl:ENSDART00000109664
GeneID:558447 KEGG:dre:558447 HOVERGEN:HBG095874 InParanoid:A3KH10
NextBio:20882472 Uniprot:A3KH10
Length = 321
Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 64/185 (34%), Positives = 96/185 (51%)
Query: 134 GP-KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
GP K +A+DCEMVG G G AR +V D +V++ YV+P PVT+YR +G+
Sbjct: 132 GPIKYLALDCEMVGTGPKGAQSELARCSIVSYDGDVVYDKYVKPINPVTDYRTRWSGIRR 191
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+D+ +A P + +I++I+ TG+++ VGH + +D +L+ +P
Sbjct: 192 QDLLHATPFYHAQKEIVKII-----TGKVV---------VGHAIHNDFKALKYFHPAFQT 237
Query: 253 RDTAKYRPLM--KTNLVSH---SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFR 305
RDT++ PL+ K SLK LT+ L DIQ+G H ED + M LYK
Sbjct: 238 RDTSRI-PLLNEKAGFPEKQCVSLKKLTQAILKRDIQTGYRGHSSVEDAKATMELYKVVE 296
Query: 306 RQDHQ 310
R Q
Sbjct: 297 RMWEQ 301
>MGI|MGI:1915298 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0010212 "response to
ionizing radiation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISO]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1915298 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AK090056
EMBL:AK012555 EMBL:AK031972 EMBL:AK165708 EMBL:AK166806
EMBL:AK167042 EMBL:AK167658 EMBL:BC022614 IPI:IPI00857428
IPI:IPI00990849 RefSeq:NP_001156411.1 RefSeq:NP_080807.3
UniGene:Mm.34109 ProteinModelPortal:Q9CZI9 SMR:Q9CZI9
PhosphoSite:Q9CZI9 PRIDE:Q9CZI9 Ensembl:ENSMUST00000107421
Ensembl:ENSMUST00000107423 Ensembl:ENSMUST00000107425 GeneID:68048
KEGG:mmu:68048 UCSC:uc009hxp.1 UCSC:uc009hxq.1
GeneTree:ENSGT00520000055542 InParanoid:Q9CZI9 NextBio:326308
Bgee:Q9CZI9 Genevestigator:Q9CZI9 Uniprot:Q9CZI9
Length = 336
Score = 229 (85.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 72/240 (30%), Positives = 116/240 (48%)
Query: 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRTCRGP-KAV 138
G LC+ SPS + EA P ++ SN KK ++ + GP K V
Sbjct: 56 GPGLCL--LPSPSQMPAVTEASDSRRQRPKARSGSNGLCSKK---SVPREAPRPGPIKCV 110
Query: 139 AMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNA 198
A+DCEMVG G G + AR +V +V++ Y++P++P+ +YR +G+T + + A
Sbjct: 111 AIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITRQHMHKA 170
Query: 199 MPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKY 258
+P + + +IL++L K +++VGH L +D +L+ +P RDT
Sbjct: 171 IPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQTRDTTYV 216
Query: 259 RPLMK--TNLVSH--SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRRQ-DHQV 311
L+ ++L+ SLK L L IQ G H ED ++ M LY+ Q + QV
Sbjct: 217 PNLLSQPSSLIRTRVSLKDLALNLLHKKIQVGHQGHSSVEDAMTAMELYQLVEVQWEQQV 276
>UNIPROTKB|Q2YDK1 [details] [associations]
symbol:ISG20L2 "Interferon-stimulated 20 kDa
exonuclease-like 2" species:9913 "Bos taurus" [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 GO:GO:0042254 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:BC110186
IPI:IPI00711321 RefSeq:NP_001039682.1 UniGene:Bt.80589
ProteinModelPortal:Q2YDK1 SMR:Q2YDK1 PRIDE:Q2YDK1
Ensembl:ENSBTAT00000001989 GeneID:515980 KEGG:bta:515980 CTD:81875
HOVERGEN:HBG107986 InParanoid:Q2YDK1 OMA:GTGPKGH OrthoDB:EOG4H4641
NextBio:20872080 Uniprot:Q2YDK1
Length = 349
Score = 227 (85.0 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 65/196 (33%), Positives = 104/196 (53%)
Query: 114 SNAESQKKISGAIDEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTY 173
++ S+ K SG + +K G K VA+DCEMVG G G + AR +V+ D +V++ Y
Sbjct: 156 THTHSENKYSG-VSQK--IPG-KMVAIDCEMVGTGPKGHVSSLARCSIVNYDGDVLYDEY 211
Query: 174 VQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVG 233
+ P + +YR +G+ ++ + NA P K +++IL+IL GK ++VG
Sbjct: 212 ILPPCHIVDYRTRWSGIRKQHMVNATPFKIARNQILKILA------------GK--IVVG 257
Query: 234 HGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNL-----VSHSLKYLTRTYLGYDIQSGV- 287
H + +D +L+ +P + RDT+ + PL+ + SLK LT+ L DIQ+G
Sbjct: 258 HAIHNDFKALQYIHPKSLTRDTS-HIPLLNRKADCPENATMSLKSLTKKLLNRDIQAGKS 316
Query: 288 -HDPYEDCVSVMRLYK 302
H ED + M LYK
Sbjct: 317 GHSSVEDAQATMELYK 332
>UNIPROTKB|H9L3P1 [details] [associations]
symbol:H9L3P1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:AADN02034596 EMBL:AADN02034597
Ensembl:ENSGALT00000040830 Uniprot:H9L3P1
Length = 327
Score = 223 (83.6 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 73/225 (32%), Positives = 111/225 (49%)
Query: 96 KHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRTCRGP-----------KAVAMDCEM 144
K + +A VPF T K + AID K R P K VA+DCEM
Sbjct: 102 KRTQGAKKAAKVPFRSTGLPPPPSKLV--AIDXK-PLRAPVRATGLPPPPSKLVAIDCEM 158
Query: 145 VGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEV 204
VG G G AR +V + +V++ +YV+P P+ +YR +G+ ++ + NA+P +
Sbjct: 159 VGTGPGGCTSSLARCSIVGYEGDVLYDSYVRPTEPIVDYRTRWSGIRKKHMVNAVPFCKA 218
Query: 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKT 264
+ +IL+IL+ GK ++VGH + +D +L+ ++P + RDT+K PL+
Sbjct: 219 QREILKILS------------GK--VVVGHAVHNDFKALKYSHPKELTRDTSKI-PLLNQ 263
Query: 265 N-----LVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYK 302
V+ SLK L + L DIQ G H ED + M LYK
Sbjct: 264 KGGFPENVAISLKRLAKELLHKDIQVGKSGHCSVEDARTTMELYK 308
>RGD|1305051 [details] [associations]
symbol:Aen "apoptosis enhancing nuclease" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISO;ISS]
[GO:0010212 "response to ionizing radiation" evidence=IEA;ISO;ISS]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IEA;ISO;ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
RGD:1305051 GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 EMBL:CH473980
GO:GO:0003676 GO:GO:0010212 GO:GO:0004527 CTD:64782 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OrthoDB:EOG4P8FJM
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
EMBL:BC166435 IPI:IPI00365766 RefSeq:NP_001101957.1
UniGene:Rn.46887 ProteinModelPortal:B2GUW6 SMR:B2GUW6 PRIDE:B2GUW6
Ensembl:ENSRNOT00000064438 GeneID:361594 KEGG:rno:361594
UCSC:RGD:1305051 NextBio:676841 Genevestigator:B2GUW6
Uniprot:B2GUW6
Length = 332
Score = 223 (83.6 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 68/229 (29%), Positives = 115/229 (50%)
Query: 134 GP-KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
GP K VA+DCEMVG G G + AR +V +V++ Y++P++P+ +YR +G+T
Sbjct: 101 GPSKYVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITR 160
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+ + A+P + + +IL++L K +++VGH L +D +L+ +P +
Sbjct: 161 QHMHKAIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPGSQI 206
Query: 253 RDTAKYRP--LMKTNLVSH---SLKYLTRTYLGYDIQSGVH--DPYEDCVSVMRLYKRFR 305
RDT Y P L + + ++ SLK L L IQ G H ED ++ M LY+
Sbjct: 207 RDTT-YVPNLLSQPSSLTRARVSLKDLALNLLHKKIQVGHHGHSSVEDAMTAMELYQLVE 265
Query: 306 RQ-DHQVEEIG-----NQNTTGSFDSYKYKELEKMSPNELYQISKSDYR 348
Q + QV ++ S D +Y + ++ P +L Q ++ D R
Sbjct: 266 VQWEQQVASTAKAHPEDRGPDSSTDVEQYMD-DQYWPEDLAQSTRGDTR 313
>UNIPROTKB|E2R2F5 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016605 "PML body" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008310 "single-stranded DNA
specific 3'-5' exodeoxyribonuclease activity" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=IEA] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0016605 GO:GO:0003676
GO:GO:0009615 GO:GO:0006401 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0000175 GO:GO:0000738 GO:GO:0008310
Ensembl:ENSCAFT00000018291 Uniprot:E2R2F5
Length = 183
Score = 210 (79.0 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 61/179 (34%), Positives = 96/179 (53%)
Query: 134 GPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEE 193
G VA+DCEMVG G + L AR LVD V++ +++P+ +T+YR +V+G+T
Sbjct: 4 GTDVVAIDCEMVGVGPSRKSGL-ARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPR 62
Query: 194 DIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
++ A P + +IL++L +GK L+VGH L+HD +L+ N ++ +
Sbjct: 63 HMEQATPFAVARLEILQLL------------EGK--LVVGHDLKHDFQALKENMSNYAIY 108
Query: 254 DTAKYRPLMK-TNLVSH---SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRR 306
DT+ R L + NL + SL+ L+ LG IQ+ H ED + M LY+ RR
Sbjct: 109 DTSTDRLLWREANLQNCRRVSLRVLSERLLGRRIQNSRFGHSSVEDAKAAMELYRLSRR 167
>UNIPROTKB|F6X5D6 [details] [associations]
symbol:ISG20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:3669 KO:K12579 OMA:ARCSLVD
Ensembl:ENSCAFT00000018291 EMBL:AAEX03002317 RefSeq:XP_545847.2
GeneID:488729 KEGG:cfa:488729 Uniprot:F6X5D6
Length = 171
Score = 210 (79.0 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 61/179 (34%), Positives = 96/179 (53%)
Query: 134 GPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEE 193
G VA+DCEMVG G + L AR LVD V++ +++P+ +T+YR +V+G+T
Sbjct: 4 GTDVVAIDCEMVGVGPSRKSGL-ARCSLVDLHGTVLYDKFIRPEGEITDYRTQVSGITPR 62
Query: 194 DIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
++ A P + +IL++L +GK L+VGH L+HD +L+ N ++ +
Sbjct: 63 HMEQATPFAVARLEILQLL------------EGK--LVVGHDLKHDFQALKENMSNYAIY 108
Query: 254 DTAKYRPLMK-TNLVSH---SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRR 306
DT+ R L + NL + SL+ L+ LG IQ+ H ED + M LY+ RR
Sbjct: 109 DTSTDRLLWREANLQNCRRVSLRVLSERLLGRRIQNSRFGHSSVEDAKAAMELYRLSRR 167
>UNIPROTKB|E2QS77 [details] [associations]
symbol:ISG20L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0003676 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 OMA:GTGPKGH
EMBL:AAEX03005314 RefSeq:XP_547530.2 Ensembl:ENSCAFT00000026521
GeneID:490409 KEGG:cfa:490409 NextBio:20863435 Uniprot:E2QS77
Length = 348
Score = 224 (83.9 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 68/201 (33%), Positives = 101/201 (50%)
Query: 112 TLSNAESQKKISGAIDEK---RTCRGPKA-VAMDCEMVGGGSNGTLDLCARVCLVDEDEN 167
T NA Q I D K T + PK VA+DCEMVG G G + AR +V+ +
Sbjct: 146 TQKNAP-QNSIQSHSDNKCSGTTQKTPKKMVAIDCEMVGTGPKGHVSSLARCSIVNYHGD 204
Query: 168 VIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGK 227
V++ Y+ P + +YR +G+ ++ + NA P K + +IL+IL TG+++
Sbjct: 205 VLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKVARGQILKIL-----TGKIV----- 254
Query: 228 ARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPL-MKTNLVSH---SLKYLTRTYLGYDI 283
VGH + +D +L+ +P + RDT+ PL K + + SLK LT+ L DI
Sbjct: 255 ----VGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKSLTKKLLNRDI 310
Query: 284 QSGV--HDPYEDCVSVMRLYK 302
Q G H ED + M LYK
Sbjct: 311 QVGKSGHSSVEDAQATMELYK 331
>UNIPROTKB|F1SRT3 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:FP017226 RefSeq:XP_003121906.1
UniGene:Ssc.43796 Ensembl:ENSSSCT00000005624 GeneID:100522657
KEGG:ssc:100522657 Uniprot:F1SRT3
Length = 325
Score = 221 (82.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 72/225 (32%), Positives = 108/225 (48%)
Query: 103 LSAPVPFEKTLSNAESQKKISGAI--DEKRTCR---GP---KAVAMDCEMVGGGSNGTLD 154
L AP E + S + K SG K T R GP K VA+DCEMVG G G +
Sbjct: 68 LDAPPGTEASSSVRQRPKAESGGAPCSRKPTPRESAGPLPSKCVAIDCEMVGTGPRGRVS 127
Query: 155 LCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNN 214
AR +V +V++ Y++P++P+ +YR +G+T + ++ A+P + + +IL++L
Sbjct: 128 ELARCSVVSYYGDVLYDKYIRPEMPIVDYRTRWSGITRQHMRKAIPFQVAQKEILKLL-- 185
Query: 215 GESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSH----- 269
K +++VGH L +D +L+ +P RDT Y P + + H
Sbjct: 186 ------------KGKVVVGHALHNDFQALKYVHPRGQTRDTT-YVPNLLSQPGLHTRTRV 232
Query: 270 SLKYLTRTYLGYDIQSGVH--DPYEDCVSVMRLYKRFRRQDHQVE 312
SLK L L IQ G H ED V+ M LY+ Q Q E
Sbjct: 233 SLKDLALQLLHKKIQVGQHGHSSVEDAVTAMELYRLVEVQWEQQE 277
>UNIPROTKB|F8WG03 [details] [associations]
symbol:Aen "Apoptosis-enhancing nuclease" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1305051 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00949441
Ensembl:ENSRNOT00000024962 OMA:GMVPREV Uniprot:F8WG03
Length = 355
Score = 223 (83.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 68/229 (29%), Positives = 115/229 (50%)
Query: 134 GP-KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
GP K VA+DCEMVG G G + AR +V +V++ Y++P++P+ +YR +G+T
Sbjct: 124 GPSKYVAIDCEMVGTGPQGRVSELARCSVVSYSGDVLYDKYIRPEMPIVDYRTRWSGITR 183
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+ + A+P + + +IL++L K +++VGH L +D +L+ +P +
Sbjct: 184 QHMHKAIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPGSQI 229
Query: 253 RDTAKYRP--LMKTNLVSH---SLKYLTRTYLGYDIQSGVH--DPYEDCVSVMRLYKRFR 305
RDT Y P L + + ++ SLK L L IQ G H ED ++ M LY+
Sbjct: 230 RDTT-YVPNLLSQPSSLTRARVSLKDLALNLLHKKIQVGHHGHSSVEDAMTAMELYQLVE 288
Query: 306 RQ-DHQVEEIG-----NQNTTGSFDSYKYKELEKMSPNELYQISKSDYR 348
Q + QV ++ S D +Y + ++ P +L Q ++ D R
Sbjct: 289 VQWEQQVASTAKAHPEDRGPDSSTDVEQYMD-DQYWPEDLAQSTRGDTR 336
>RGD|1359413 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene 20-like
2" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 RGD:1359413 GO:GO:0005730 GO:GO:0003676
GO:GO:0042254 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 CTD:81875 HOVERGEN:HBG107986
OrthoDB:EOG4H4641 EMBL:BC079314 IPI:IPI00373225
RefSeq:NP_001007742.1 UniGene:Rn.56954 ProteinModelPortal:Q6AXU3
PRIDE:Q6AXU3 Ensembl:ENSRNOT00000015471 GeneID:361977
KEGG:rno:361977 UCSC:RGD:1359413 InParanoid:Q6AXU3 OMA:ESGARTF
NextBio:678262 Genevestigator:Q6AXU3 Uniprot:Q6AXU3
Length = 369
Score = 223 (83.6 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 58/174 (33%), Positives = 96/174 (55%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
K VA+DCEMVG G G + AR +V+ + +V++ Y++P + +YR +G+ + +
Sbjct: 194 KMVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYIRPPCYIVDYRTRWSGIRKCHM 253
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
NA P K + +IL+IL+ GK ++VGH + +D +L+ +P + RDT
Sbjct: 254 VNATPFKTARSQILKILS------------GK--VVVGHAIHNDYKALQYFHPKSLTRDT 299
Query: 256 AKYRPLMKTNL-----VSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYK 302
++ PL+ V+ SLK+LT+ L DIQ+G+ H ED + + LYK
Sbjct: 300 SQI-PLLNRKADCPENVTLSLKHLTKKLLSRDIQTGLSGHSSVEDAQATLELYK 352
>MGI|MGI:2140076 [details] [associations]
symbol:Isg20l2 "interferon stimulated exonuclease gene
20-like 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2140076
GO:GO:0005730 GO:GO:0003676 GO:GO:0042254 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00520000055542
KO:K01175 CTD:81875 HOVERGEN:HBG107986 OrthoDB:EOG4H4641
EMBL:AK053778 EMBL:AK155979 EMBL:BC098326 IPI:IPI00222565
RefSeq:NP_808331.1 UniGene:Mm.45744 ProteinModelPortal:Q3U1G5
SMR:Q3U1G5 PhosphoSite:Q3U1G5 PaxDb:Q3U1G5 PRIDE:Q3U1G5
Ensembl:ENSMUST00000055984 GeneID:229504 KEGG:mmu:229504
UCSC:uc008ptj.1 InParanoid:Q4KMV7 NextBio:379467 Bgee:Q3U1G5
CleanEx:MM_ISG20L2 Genevestigator:Q3U1G5 Uniprot:Q3U1G5
Length = 368
Score = 222 (83.2 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 60/174 (34%), Positives = 93/174 (53%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
K VA+DCEMVG G G + AR +V+ + +V++ YV P + NYR +G+ + +
Sbjct: 193 KMVAIDCEMVGTGPKGRVSSLARCSIVNYNGDVLYDEYVLPPCYIVNYRTRWSGIRKCHM 252
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
NA P K + +IL+IL+ GK +++GH + +D +L+ +P + RDT
Sbjct: 253 VNATPFKTARSQILKILS------------GK--VVIGHAIHNDYKALQYFHPKSLTRDT 298
Query: 256 AKYRPLMKTNL-----VSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYK 302
++ PL+ V+ SLK+LT+ L DIQ G H ED + M LYK
Sbjct: 299 SRI-PLLNRKADCPENVTLSLKHLTKKLLSRDIQVGNTGHSSVEDAQATMELYK 351
>UNIPROTKB|Q8WTP8 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0010212 "response to ionizing radiation"
evidence=IDA] [GO:0004527 "exonuclease activity" evidence=IDA]
[GO:0042771 "intrinsic apoptotic signaling pathway in response to
DNA damage by p53 class mediator" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005654 GO:GO:0005730
GO:GO:0042771 GO:GO:0003676 GO:GO:0010212 GO:GO:0004527
EMBL:AF327352 EMBL:AC013489 EMBL:CH471101 EMBL:BC005164
EMBL:BC014407 EMBL:BC020988 EMBL:AK022546 IPI:IPI00074083
IPI:IPI00141525 RefSeq:NP_073604.3 UniGene:Hs.436102
ProteinModelPortal:Q8WTP8 SMR:Q8WTP8 STRING:Q8WTP8
PhosphoSite:Q8WTP8 DMDM:296434390 PRIDE:Q8WTP8 DNASU:64782
Ensembl:ENST00000332810 Ensembl:ENST00000379231 GeneID:64782
KEGG:hsa:64782 UCSC:uc002bmt.2 CTD:64782 GeneCards:GC15P089164
H-InvDB:HIX0012556 HGNC:HGNC:25722 HPA:HPA048599 MIM:610177
neXtProt:NX_Q8WTP8 PharmGKB:PA162375720 eggNOG:COG0847
HOGENOM:HOG000182422 HOVERGEN:HBG100435 OMA:HKRKSRQ
OrthoDB:EOG4P8FJM PhylomeDB:Q8WTP8 GenomeRNAi:64782 NextBio:66818
ArrayExpress:Q8WTP8 Bgee:Q8WTP8 CleanEx:HS_AEN
Genevestigator:Q8WTP8 InterPro:IPR013520 SUPFAM:SSF53098
Uniprot:Q8WTP8
Length = 325
Score = 218 (81.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 60/184 (32%), Positives = 93/184 (50%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
K VA+DCEMVG G G + AR +V NV++ Y++P++P+ +YR +G+T + +
Sbjct: 109 KCVAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQHM 168
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
+ A+P + + +IL++L K +++VGH L +D +L+ +P RDT
Sbjct: 169 RKAVPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQTRDT 214
Query: 256 AKYRP--LMKTNLVSH---SLKYLTRTYLGYDIQSGVH--DPYEDCVSVMRLYKRFRRQD 308
Y P L + L + SLK L L IQ G H ED + M LY+ Q
Sbjct: 215 T-YVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQW 273
Query: 309 HQVE 312
Q E
Sbjct: 274 EQQE 277
>UNIPROTKB|J9PA78 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 CTD:64782 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 RefSeq:XP_545846.2 Ensembl:ENSCAFT00000047692
GeneID:488728 KEGG:cfa:488728 Uniprot:J9PA78
Length = 324
Score = 214 (80.4 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 66/227 (29%), Positives = 111/227 (48%)
Query: 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
R K VA+DCEMVG G G + AR +V +V++ Y++P++P+ +YR +G+T
Sbjct: 106 RPSKCVAIDCEMVGTGPRGRVSELARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTR 165
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+ ++ A+P + + +IL++L K +++VGH L +D +L+ +P
Sbjct: 166 QHMRKAIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQT 211
Query: 253 RDTAKYRP--LMKTNLVSH---SLKYLTRTYLGYDIQSGVH--DPYEDCVSVMRLYKRFR 305
RDT Y P L + L + SLK L L IQ+G H ED + M LY+
Sbjct: 212 RDTT-YVPNLLHQPGLHTRTRVSLKDLALQLLHKKIQAGQHGHSSVEDATTAMELYRLVE 270
Query: 306 RQDHQVEEIG------NQNTTGSFDSYKYKELEKMSPNELYQISKSD 346
Q Q + ++ S D +Y E ++ P +L Q ++ +
Sbjct: 271 VQWEQQQASSLPPRPEDREPDSSTDMEQYME-DQYWPEDLAQGTRGE 316
>RGD|1306407 [details] [associations]
symbol:Isg20 "interferon stimulated exonuclease gene 20"
species:10116 "Rattus norvegicus" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=ISO] [GO:0000738 "DNA
catabolic process, exonucleolytic" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 RGD:1306407
GO:GO:0016605 GO:GO:0003676 GO:GO:0009615 GO:GO:0006401
eggNOG:COG0847 HOGENOM:HOG000182422 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 CTD:3669 HOVERGEN:HBG052149 KO:K12579
OrthoDB:EOG4M91SN EMBL:BC086557 IPI:IPI00364365
RefSeq:NP_001008510.1 UniGene:Rn.16103 SMR:Q5RJP5
Ensembl:ENSRNOT00000024826 GeneID:293052 KEGG:rno:293052
NextBio:635263 Genevestigator:Q5RJP5 Uniprot:Q5RJP5
Length = 181
Score = 200 (75.5 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 59/178 (33%), Positives = 92/178 (51%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P+ VAMDCEMVG G L AR +V+ V++ Y+QP+ +T+YR +V+G+T +
Sbjct: 5 PEVVAMDCEMVGLGPQRVSGL-ARCSIVNVHSAVLYDKYIQPEGEITDYRTQVSGITPQH 63
Query: 195 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRD 254
+ A P E + +IL++L K +L+VGH L+HD +L+ + + + D
Sbjct: 64 MARATPFAEARLEILQLL--------------KGKLVVGHDLKHDFSALKEDMRKYTIYD 109
Query: 255 TAKYRPLM---KTNLVSH-SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRR 306
T+ L K + S SL+ L + L IQ+ H ED + M LYK +R
Sbjct: 110 TSTDMLLWHEAKLHCYSRVSLRLLCKRLLHKSIQNNWRGHCSVEDARATMELYKISQR 167
>UNIPROTKB|F1PWV6 [details] [associations]
symbol:AEN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042771 "intrinsic apoptotic signaling
pathway in response to DNA damage by p53 class mediator"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00520000055542 EMBL:AAEX03002316
EMBL:AAEX03002317 Ensembl:ENSCAFT00000018286 Uniprot:F1PWV6
Length = 336
Score = 214 (80.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 66/227 (29%), Positives = 111/227 (48%)
Query: 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
R K VA+DCEMVG G G + AR +V +V++ Y++P++P+ +YR +G+T
Sbjct: 106 RPSKCVAIDCEMVGTGPRGRVSELARCSVVSYHGDVLYDKYIRPEMPIVDYRTRWSGVTR 165
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+ ++ A+P + + +IL++L K +++VGH L +D +L+ +P
Sbjct: 166 QHMRKAIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQT 211
Query: 253 RDTAKYRP--LMKTNLVSH---SLKYLTRTYLGYDIQSGVH--DPYEDCVSVMRLYKRFR 305
RDT Y P L + L + SLK L L IQ+G H ED + M LY+
Sbjct: 212 RDTT-YVPNLLHQPGLHTRTRVSLKDLALQLLHKKIQAGQHGHSSVEDATTAMELYRLVE 270
Query: 306 RQDHQVEEIG------NQNTTGSFDSYKYKELEKMSPNELYQISKSD 346
Q Q + ++ S D +Y E ++ P +L Q ++ +
Sbjct: 271 VQWEQQQASSLPPRPEDREPDSSTDMEQYME-DQYWPEDLAQGTRGE 316
>UNIPROTKB|F1MZX4 [details] [associations]
symbol:LOC614749 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005654
GO:GO:0005730 GO:GO:0042771 GO:GO:0003676 GO:GO:0010212
GO:GO:0004527 OMA:HKRKSRQ InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 EMBL:DAAA02052106 IPI:IPI00714615
Ensembl:ENSBTAT00000023454 Uniprot:F1MZX4
Length = 325
Score = 212 (79.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 62/192 (32%), Positives = 97/192 (50%)
Query: 130 RTCRGP---KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYE 186
R GP K VA+DCEMVG G G + AR +V V++ Y++P++P+ +YR
Sbjct: 100 RDSAGPLPSKCVAIDCEMVGTGPRGRVSELARCSVVSYHGEVLYDKYIRPEMPIVDYRTR 159
Query: 187 VTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMN 246
+G+T + ++ A+P + + +IL++L K +++VGH L +D +L+
Sbjct: 160 WSGITRQHMRKAIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYI 205
Query: 247 YPDHMLRDTAKYRPLM-KTNL-VSH--SLKYLTRTYLGYDIQSGVH--DPYEDCVSVMRL 300
+P RDT L+ + L V + SLK L L IQ G H ED V+ M L
Sbjct: 206 HPRGQTRDTTSVPSLLSQPGLHVRNRVSLKDLALQLLHKKIQVGQHGHSSVEDAVTAMEL 265
Query: 301 YKRFRRQ-DHQV 311
Y+ Q + QV
Sbjct: 266 YRLVEVQWEQQV 277
>UNIPROTKB|Q5REE2 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9601
"Pongo abelii" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0042771 "intrinsic apoptotic signaling pathway in
response to DNA damage by p53 class mediator" evidence=ISS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005654 GO:GO:0005730 GO:GO:0042771 GO:GO:0003676
GO:GO:0010212 GO:GO:0004527 CTD:64782 HOGENOM:HOG000182422
HOVERGEN:HBG100435 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CR857587
RefSeq:NP_001124869.1 UniGene:Pab.10699 ProteinModelPortal:Q5REE2
SMR:Q5REE2 GeneID:100171731 KEGG:pon:100171731 Uniprot:Q5REE2
Length = 325
Score = 207 (77.9 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 58/184 (31%), Positives = 90/184 (48%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
K VA+DCEMVG G G + AR +V +V++ Y++P++P+ +YR +G+T + +
Sbjct: 109 KCVAIDCEMVGTGPRGRVSELARCSIVSYHGDVLYDKYIRPEMPIVDYRTRWSGITRQHM 168
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
A+P + + +IL++L K +++VGH L +D +L+ +P RDT
Sbjct: 169 CKAIPFQVAQKEILKLL--------------KGKVVVGHALHNDFQALKYVHPRSQTRDT 214
Query: 256 AKYRPLMKTNLVSH-----SLKYLTRTYLGYDIQSGVH--DPYEDCVSVMRLYKRFRRQD 308
Y P + H SLK L L IQ G H ED + M LY+ Q
Sbjct: 215 T-YVPNFLSEPSLHIRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQW 273
Query: 309 HQVE 312
Q E
Sbjct: 274 EQQE 277
>UNIPROTKB|Q96AZ6 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0016605 "PML body" evidence=IDA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0000738 "DNA catabolic
process, exonucleolytic" evidence=IDA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IDA] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0060337 "type I
interferon-mediated signaling pathway" evidence=TAS]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
Reactome:REACT_6900 GO:GO:0060337 GO:GO:0046872 GO:GO:0016605
GO:GO:0008283 GO:GO:0051607 GO:GO:0003723 GO:GO:0009615
GO:GO:0006401 eggNOG:COG0847 HOGENOM:HOG000182422
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 EMBL:X89773 EMBL:U88964
EMBL:BT006952 EMBL:CR456942 EMBL:BC007922 EMBL:BC016341
IPI:IPI00514614 IPI:IPI00647246 RefSeq:NP_002192.2
UniGene:Hs.459265 PDB:1WLJ PDBsum:1WLJ ProteinModelPortal:Q96AZ6
SMR:Q96AZ6 STRING:Q96AZ6 PhosphoSite:Q96AZ6 DMDM:57012967
PaxDb:Q96AZ6 PRIDE:Q96AZ6 DNASU:3669 Ensembl:ENST00000306072
Ensembl:ENST00000560741 GeneID:3669 KEGG:hsa:3669 UCSC:uc002bmv.1
CTD:3669 GeneCards:GC15P089181 HGNC:HGNC:6130 MIM:604533
neXtProt:NX_Q96AZ6 PharmGKB:PA29930 HOVERGEN:HBG052149 KO:K12579
OMA:ARCSLVD OrthoDB:EOG4M91SN PhylomeDB:Q96AZ6 ChiTaRS:ISG20
EvolutionaryTrace:Q96AZ6 GenomeRNAi:3669 NextBio:14359 Bgee:Q96AZ6
CleanEx:HS_ISG20 Genevestigator:Q96AZ6 GermOnline:ENSG00000172183
Uniprot:Q96AZ6
Length = 181
Score = 190 (71.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 55/177 (31%), Positives = 92/177 (51%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
+ VAMDCEMVG G + L AR LV+ V++ +++P+ +T+YR V+G+T + +
Sbjct: 6 EVVAMDCEMVGLGPHRESGL-ARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHM 64
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
A P + +IL++L K +L+VGH L+HD +L+ + + + DT
Sbjct: 65 VGATPFAVARLEILQLL--------------KGKLVVGHDLKHDFQALKEDMSGYTIYDT 110
Query: 256 AKYRPLMKTNLVSH----SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRR 306
+ R L + + H SL+ L+ L IQ+ + H ED + M LY+ +R
Sbjct: 111 STDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLLGHSSVEDARATMELYQISQR 167
>TAIR|locus:2083163 [details] [associations]
symbol:SDN1 "small RNA degrading nuclease 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008408 "3'-5' exonuclease activity"
evidence=IDA] [GO:0010587 "miRNA catabolic process" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL132978 KO:K14570 GO:GO:0010587 EMBL:BT030315
IPI:IPI00540352 PIR:T45863 RefSeq:NP_190579.2 UniGene:At.35533
ProteinModelPortal:A3KPE8 SMR:A3KPE8 PaxDb:A3KPE8 PRIDE:A3KPE8
EnsemblPlants:AT3G50100.1 GeneID:824172 KEGG:ath:AT3G50100
TAIR:At3g50100 HOGENOM:HOG000083886 InParanoid:A3KPE8 OMA:DYRTDIT
PhylomeDB:A3KPE8 ProtClustDB:CLSN2925541 Genevestigator:A3KPE8
Uniprot:A3KPE8
Length = 409
Score = 208 (78.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 69/177 (38%), Positives = 95/177 (53%)
Query: 129 KRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVT 188
K+ VA+DCEMV +GT L RV +VD D VI +V+P PV +YR ++T
Sbjct: 132 KKVMESTNMVAVDCEMVLC-EDGTEGL-VRVGVVDRDLKVILDEFVKPNKPVVDYRTDIT 189
Query: 189 GLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP 248
G+T EDI+NA V D I E L STG + LVGH L DL+ L++++P
Sbjct: 190 GITAEDIENAS--LSVVD-IQETLQPFLSTGTI---------LVGHSLNRDLEVLKIDHP 237
Query: 249 DHMLRDTA---KYRPLMKTNLVSHSLKYLTRTYLGYDIQ-SGV-HDPYEDCVSVMRL 300
+ DTA KY K L SL L ++ LGY+++ +GV HD D + M+L
Sbjct: 238 KVI--DTALVFKYPNTRK--LRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKL 290
>UNIPROTKB|Q66UW5 [details] [associations]
symbol:Isg20 "Interferon-stimulated gene 20 kDa protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008859 "exoribonuclease II activity" evidence=IEA] [GO:0051607
"defense response to virus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
GO:GO:0046872 GO:GO:0045087 GO:GO:0051607 GO:GO:0003723
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0006364
GO:GO:0008859 CTD:3669 HOVERGEN:HBG052149 KO:K12579 EMBL:AY702647
RefSeq:NP_001005351.2 UniGene:Ssc.42771 ProteinModelPortal:Q66UW5
SMR:Q66UW5 GeneID:448855 KEGG:ssc:448855 Uniprot:Q66UW5
Length = 181
Score = 185 (70.2 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 55/177 (31%), Positives = 89/177 (50%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
+ VAMDCEMVG G L AR LV+ V++ ++QP+ +T+YR V+G+T + +
Sbjct: 6 EVVAMDCEMVGMGPRRESGL-ARCSLVNVHGAVLYDKFIQPEGEITDYRTRVSGVTPQHM 64
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
A P + +IL++L K +L+VGH L+HD +L+ + + + DT
Sbjct: 65 VGATPFAVARLEILQLL--------------KGKLVVGHDLKHDFQALKEDMNRYTIYDT 110
Query: 256 AKYRPLMKTNLVSH----SLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRR 306
+ L + + H SL+ L L IQ+ + H ED + M LY+ +R
Sbjct: 111 STDMLLWREAKLDHCRRVSLRVLCERLLHKSIQNSLLGHSSVEDAKATMELYQISQR 167
>POMBASE|SPAC637.09 [details] [associations]
symbol:SPAC637.09 "ribonuclease H70 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISO] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=ISO] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=ISO] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 PomBase:SPAC637.09 Pfam:PF00929 GO:GO:0005634
EMBL:CU329670 GO:GO:0003676 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467 GO:GO:0034476
OrthoDB:EOG4MKRQF GO:GO:0034415 PIR:T39001 RefSeq:NP_594627.2
STRING:O94443 EnsemblFungi:SPAC637.09.1 GeneID:2543505
HOGENOM:HOG000165759 NextBio:20804515 Uniprot:O94443
Length = 631
Score = 202 (76.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 70/226 (30%), Positives = 114/226 (50%)
Query: 85 MNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAI----DEKRTCRGPKAVAM 140
M F PS + E+ + P T+ E + SG + D PK +A+
Sbjct: 221 MASFSKPSDYLMSYESF-IEDEYPLHPTVMKGEEVTQPSGWVASAGDFHSPPINPKILAI 279
Query: 141 DCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMP 200
DCEMV NG L++ ARV +VD VI+ +V+P+ PVT+Y + +G+TEE ++N
Sbjct: 280 DCEMVRT-ENG-LEI-ARVTIVDMKSEVIYDEFVKPESPVTDYVTQYSGITEEKLRN--- 333
Query: 201 LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRP 260
+ +L++ +S + +D+ +L+GH L DL+ L+ +P H++ DTA
Sbjct: 334 -------VTTVLSDVQSYLKKTVDNNT--VLLGHSLNSDLNCLKFTHP-HII-DTANIYN 382
Query: 261 LMKTNLVSHSLKYLTRTYLGYDIQ-SGV--HDPYED---CVSVMRL 300
+ SLK+L +L +IQ +G HD ED CV +++L
Sbjct: 383 HTRGPPSKPSLKWLATKWLRREIQKAGALGHDSAEDALACVDLLKL 428
>ASPGD|ASPL0000067196 [details] [associations]
symbol:AN7566 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 EMBL:AACD01000129 EMBL:BN001304
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 OrthoDB:EOG4MKRQF HOGENOM:HOG000165759 RefSeq:XP_680835.1
ProteinModelPortal:Q5AVW4 EnsemblFungi:CADANIAT00000673
GeneID:2869567 KEGG:ani:AN7566.2 OMA:WARMREL Uniprot:Q5AVW4
Length = 723
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/175 (34%), Positives = 94/175 (53%)
Query: 134 GPKAVAMDCEM--VGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLT 191
G +A+DCEM GGS+ +L R+ LV D V+ V+P+LPV +Y +G+T
Sbjct: 342 GRDVLALDCEMCITEGGSS---EL-TRISLVRWDGEVVLDELVKPRLPVIDYLTRFSGIT 397
Query: 192 EEDIKNAMP-LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDH 250
+E + L++++ K+L I+ T R +LVGH L DL++L++ +P
Sbjct: 398 KEMLDPVTTTLRDIQQKLLNII-----TPR--------SILVGHSLNSDLNALKLTHP-- 442
Query: 251 MLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKR 303
+ DT P + + SLK+LT+ YLG +IQ G HD ED +V+ L K+
Sbjct: 443 FIVDTVFLYPHPRGPPLRASLKWLTQKYLGKEIQKGTTGHDSIEDARAVLELVKQ 497
>SGD|S000003508 [details] [associations]
symbol:RNH70 "3'-5' exoribonuclease" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0034415 "tRNA 3'-trailer cleavage, exonucleolytic"
evidence=IGI;IMP] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0002107
"generation of mature 3'-end of 5S rRNA generated by RNA polymerase
III" evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 SGD:S000003508 Pfam:PF00929
GO:GO:0005634 EMBL:BK006941 GO:GO:0003723 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0000175 EMBL:Z73062
GO:GO:0000467 EMBL:X84098 KO:K14570 GO:GO:0034476
GeneTree:ENSGT00630000089807 EMBL:Z73061 PIR:S64609
RefSeq:NP_011792.1 ProteinModelPortal:P53331 SMR:P53331
DIP:DIP-5564N IntAct:P53331 MINT:MINT-551078 STRING:P53331
PaxDb:P53331 PeptideAtlas:P53331 EnsemblFungi:YGR276C GeneID:853193
KEGG:sce:YGR276C CYGD:YGR276c HOGENOM:HOG000065977
OrthoDB:EOG4MKRQF NextBio:973350 Genevestigator:P53331
GermOnline:YGR276C GO:GO:0002107 GO:GO:0034415 Uniprot:P53331
Length = 553
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 52/171 (30%), Positives = 86/171 (50%)
Query: 134 GPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEE 193
G A+DCEM L R+ LV+ D VI+ V+P +P+ +Y +G+TEE
Sbjct: 222 GSHIFALDCEMCLSEQGLVL---TRISLVNFDNEVIYEELVKPDVPIVDYLTRYSGITEE 278
Query: 194 DIKNAMP--LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHM 251
+ L+EV+ +L+I++ + +L+GH L++DL +++ +P +
Sbjct: 279 KLTVGAKKTLREVQKDLLKIISRSD-------------ILIGHSLQNDLKVMKLKHP--L 323
Query: 252 LRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYK 302
+ DTA + SLKYL+ T+L IQ+G HD ED + + L K
Sbjct: 324 VVDTAIIYHHKAGDPFKPSLKYLSETFLNKSIQNGEHDSVEDARACLELTK 374
>UNIPROTKB|G4MYV4 [details] [associations]
symbol:MGG_15523 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:CM001232
RefSeq:XP_003713422.1 ProteinModelPortal:G4MYV4
EnsemblFungi:MGG_15523T0 GeneID:12987077 KEGG:mgr:MGG_15523
Uniprot:G4MYV4
Length = 720
Score = 187 (70.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 56/177 (31%), Positives = 92/177 (51%)
Query: 134 GPKAVAMDCEMVGGG-SNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
G + A+DCEM G +N L L RV ++ D V+ V+P LP+ +Y + +G+T+
Sbjct: 310 GREIFAIDCEMCRTGPTNHDLSL-TRVTILSWDGEVVMDELVKPSLPILDYLTQFSGITK 368
Query: 193 EDIKNAMP-LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHM 251
E ++ L +++ ++LE+L T R +LVGH L+ D+ +L+M +P
Sbjct: 369 EMLEPVTTTLPDIQKRLLELL-----TPR--------SILVGHSLDSDMKALQMAHP--F 413
Query: 252 LRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV-----HDPYEDCVSVMRLYKR 303
+ DT+ P + HSLK+L YLG +Q HD YED ++ + L K+
Sbjct: 414 VVDTSILFPNPSSPNGKHSLKHLASKYLGRQVQKDEGSLKGHDSYEDALTALDLVKK 470
>TAIR|locus:2169717 [details] [associations]
symbol:SDN2 "small RNA degrading nuclease 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AB005241 KO:K14570
HOGENOM:HOG000083886 EMBL:BT009685 EMBL:AK118437 IPI:IPI00548498
IPI:IPI00892313 RefSeq:NP_001119175.1 RefSeq:NP_196173.1
UniGene:At.43773 ProteinModelPortal:Q9FFG1 SMR:Q9FFG1 IntAct:Q9FFG1
PaxDb:Q9FFG1 PRIDE:Q9FFG1 EnsemblPlants:AT5G05540.1 GeneID:830437
KEGG:ath:AT5G05540 TAIR:At5g05540 InParanoid:Q9FFG1 OMA:QAFENIA
PhylomeDB:Q9FFG1 ProtClustDB:CLSN2686647 Genevestigator:Q9FFG1
Uniprot:Q9FFG1
Length = 466
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 68/200 (34%), Positives = 104/200 (52%)
Query: 114 SNAESQKKISGAIDEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTY 173
SNAE + +G +K + +A+DCEMV +G+ + RV VD D VI +
Sbjct: 120 SNAEDWVR-TGLGKKKMEPTKIEMIAIDCEMVLC-EDGS-EAVVRVAAVDRDLKVILDEF 176
Query: 174 VQPQLPVTNYRYEVTGLTEEDIKNA-MPLKEVKDKILEILNNGESTGRLMLDDGKARLLV 232
V+P PV +YR +TGLT +D++ A + + ++++K+L ++ E T +LV
Sbjct: 177 VKPNQPVVDYRTFITGLTAQDLEKATISVVDIQEKLLMFIS--EDT-----------ILV 223
Query: 233 GHGLEHDLDSLRMNYPDHM-LRDTA---KY------RPLMKTNLVSHSLKYLTRTYLGYD 282
G L HDL L++ DH + DT+ KY RPL L SL YL + LGY+
Sbjct: 224 GQSLNHDLKVLKV---DHARVIDTSLVFKYNYDGTRRPL---RLKRPSLNYLCKCILGYE 277
Query: 283 IQS-GV-HDPYEDCVSVMRL 300
+Q GV H+ D + M+L
Sbjct: 278 VQKEGVPHNCVHDAEAAMKL 297
>MGI|MGI:1928895 [details] [associations]
symbol:Isg20 "interferon-stimulated protein" species:10090
"Mus musculus" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISO] [GO:0000738 "DNA catabolic process, exonucleolytic"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0008310
"single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
evidence=ISO] [GO:0008859 "exoribonuclease II activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=ISO]
[GO:0016605 "PML body" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
MGI:MGI:1928895 GO:GO:0046872 GO:GO:0016605 GO:GO:0045087
GO:GO:0051607 GO:GO:0003723 GO:GO:0006401 eggNOG:COG0847
HOGENOM:HOG000182422 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00520000055542 GO:GO:0006364 GO:GO:0000175
GO:GO:0000738 GO:GO:0008310 GO:GO:0008859 CTD:3669 KO:K12579
OrthoDB:EOG4M91SN EMBL:AF217484 EMBL:AK008139 EMBL:AK008171
EMBL:AK008353 EMBL:BC022751 IPI:IPI00123340 IPI:IPI00467269
RefSeq:NP_001106999.1 RefSeq:NP_065608.2 UniGene:Mm.322843
ProteinModelPortal:Q9JL16 SMR:Q9JL16 STRING:Q9JL16
PhosphoSite:Q9JL16 PaxDb:Q9JL16 PRIDE:Q9JL16
Ensembl:ENSMUST00000038142 Ensembl:ENSMUST00000118867
Ensembl:ENSMUST00000120331 Ensembl:ENSMUST00000121645 GeneID:57444
KEGG:mmu:57444 UCSC:uc009hxt.1 InParanoid:Q9JL16 OMA:LNFILIQ
NextBio:313851 Bgee:Q9JL16 CleanEx:MM_ISG20 Genevestigator:Q9JL16
GermOnline:ENSMUSG00000039236 Uniprot:Q9JL16
Length = 300
Score = 177 (67.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 51/154 (33%), Positives = 83/154 (53%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P+ VAMDCEMVG G L AR +V+ V++ Y++P+ +T+YR +V+G+T +
Sbjct: 5 PEVVAMDCEMVGLGPQRVSGL-ARCSIVNIHGAVLYDKYIRPEGEITDYRTQVSGVTPQH 63
Query: 195 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRD 254
+ A P E + +IL++L K +L+VGH L+HD ++L+ + + + D
Sbjct: 64 MVRATPFGEARLEILQLL--------------KGKLVVGHDLKHDFNALKEDMSKYTIYD 109
Query: 255 TAKYRPLM---KTNLVSH-SLKYLTRTYLGYDIQ 284
T+ R L K S SL+ L + L +IQ
Sbjct: 110 TSTDRLLWHEAKLQYYSRVSLRLLCKRLLHKNIQ 143
>WB|WBGene00013244 [details] [associations]
symbol:Y56A3A.33 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0006974
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AL132860 KO:K14570 GeneTree:ENSGT00630000089807
RefSeq:NP_499565.1 ProteinModelPortal:Q9U220 SMR:Q9U220
EnsemblMetazoa:Y56A3A.33.1 EnsemblMetazoa:Y56A3A.33.2 GeneID:176636
KEGG:cel:CELE_Y56A3A.33 UCSC:Y56A3A.33 CTD:176636
WormBase:Y56A3A.33 HOGENOM:HOG000019974 InParanoid:Q9U220
OMA:HTLNGLE NextBio:893398 ArrayExpress:Q9U220 Uniprot:Q9U220
Length = 365
Score = 170 (64.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 56/173 (32%), Positives = 94/173 (54%)
Query: 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
R K A+DCE+V NG L++ ARV LVD V+ T+ P V ++ +G+TE
Sbjct: 177 RSNKVFALDCELVHT-LNG-LEV-ARVSLVDMKGKVLLDTFALPVFEVISFNSTFSGVTE 233
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+D+++A+ L+ + ++ +++N+ E+ LLVGH LE DL +LR+ + H +
Sbjct: 234 KDMESAISLEACRLQLFQLINS-ET------------LLVGHSLESDLKALRLVH--HNV 278
Query: 253 RDTAKYRPLM---KTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRL 300
DTA ++ ++ ++ SL+ L + YL D+QS H ED + M L
Sbjct: 279 IDTAVLFSIVDPSRSYILKLSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMEL 331
>UNIPROTKB|H0YMJ6 [details] [associations]
symbol:AEN "Apoptosis-enhancing nuclease" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0005730
GO:GO:0003676 EMBL:AC013489 HGNC:HGNC:25722 InterPro:IPR013520
SUPFAM:SSF53098 Ensembl:ENST00000559528 Bgee:H0YMJ6 Uniprot:H0YMJ6
Length = 179
Score = 146 (56.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
K VA+DCEMVG G G + AR +V NV++ Y++P++P+ +YR +G+T + +
Sbjct: 109 KCVAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQHM 168
Query: 196 KNAMPLK 202
+ A+P +
Sbjct: 169 RKAVPFQ 175
>DICTYBASE|DDB_G0291590 [details] [associations]
symbol:rexo1 "RNA exonuclease 1" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016070 "RNA
metabolic process" evidence=IC] [GO:0008408 "3'-5' exonuclease
activity" evidence=ISS] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 dictyBase:DDB_G0291590 Pfam:PF00929 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003676 GO:GO:0005622
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0016070
GO:GO:0008408 KO:K14570 RefSeq:XP_635319.1
ProteinModelPortal:Q54EC1 EnsemblProtists:DDB0305007 GeneID:8628263
KEGG:ddi:DDB_G0291590 InParanoid:Q54EC1 OMA:EMLAIDC Uniprot:Q54EC1
Length = 694
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 73/296 (24%), Positives = 131/296 (44%)
Query: 23 QFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCN 82
QF +H+ E + ++ + K C+K+ K E + +L +G F+ +
Sbjct: 204 QFPNYNHIFESL-LNVKTCKVQKIDTCEKMRKEIEPISFYLLDDQQLVE-NGYFTIKDLK 261
Query: 83 ---LCMNIFDSPSSLIK---------HKEACSLSAPVPFEKTLSNAESQKKISGAIDEKR 130
+ N +LIK + + A P T+++ + + + K
Sbjct: 262 DGWVYSNQVKQILNLIKPSNDDDNNNNNQEEDNGASSPTTTTVNSDDDNNDNNNNLINKL 321
Query: 131 TCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGL 190
+ + +A+DCEM G L+L R+ +V+E + V+ + V P+ P+ +Y + +G+
Sbjct: 322 NLKVKEMLAIDCEMCRT-EGGQLEL-TRISIVNEQKKVVLNELVLPEKPIIDYLTQYSGI 379
Query: 191 TEEDIKNAMP-LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPD 249
T + +KN L ++ K+ +++ G T +L+GH LE+DL + M +
Sbjct: 380 TADTLKNVTNRLSDIHAKLEKLV--GVDT-----------VLIGHSLENDLKA--MKFIH 424
Query: 250 HMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQS---GV--HDPYEDCVSVMRL 300
+ DT+ P + SLKYLT+ YL IQS G HD ED + M L
Sbjct: 425 RKIIDTSILYPTGSSG--KFSLKYLTKKYLNRIIQSTKHGKLGHDSIEDARAAMDL 478
>TAIR|locus:2155563 [details] [associations]
symbol:SDN3 "small RNA degrading nuclease 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00479 Pfam:PF00929 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AB020742 GO:GO:0016592 KO:K14570 UniGene:At.28408
UniGene:At.71151 EMBL:AY080843 EMBL:BT001977 IPI:IPI00524191
RefSeq:NP_201525.2 ProteinModelPortal:Q8RXK2 SMR:Q8RXK2
IntAct:Q8RXK2 STRING:Q8RXK2 PaxDb:Q8RXK2 PRIDE:Q8RXK2
EnsemblPlants:AT5G67240.1 GeneID:836859 KEGG:ath:AT5G67240
TAIR:At5g67240 HOGENOM:HOG000154279 InParanoid:Q8RXK2 OMA:LYVRKMV
PhylomeDB:Q8RXK2 ProtClustDB:CLSN2918891 Genevestigator:Q8RXK2
Uniprot:Q8RXK2
Length = 782
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/178 (28%), Positives = 90/178 (50%)
Query: 128 EKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEV 187
+ + + + +++DCEMV +G+ L RV VD D V+ +V+P PV +Y+ ++
Sbjct: 136 KSKVIKSTRMLSIDCEMVTC-EDGSQAL-VRVGAVDRDLKVVLDKFVKPDKPVIDYKTDI 193
Query: 188 TGLTEEDIKNA-MPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMN 246
TG+T ED++ A + + +++ K+ L+ G +LVGHGL +DL LR+
Sbjct: 194 TGVTAEDLERATLSVADIQKKLRRFLSVGT-------------ILVGHGLHNDLQVLRI- 239
Query: 247 YPDHM-LRDTAKYRPLMKTNLVSH-SLKYLTRTYLGYDIQ--SGVHDPYEDCVSVMRL 300
DH + DT+ + SL L ++ LG +++ H+ D + M+L
Sbjct: 240 --DHARVIDTSYVFEFVDAPKTQRPSLNNLCKSVLGQEVRMDGAAHNCVHDAAAAMKL 295
>RGD|1564472 [details] [associations]
symbol:RGD1564472 "similar to Transcription elongation factor B
polypeptide 3 binding protein 1" species:10116 "Rattus norvegicus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 RGD:1564472 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
IPI:IPI00767432 Ensembl:ENSRNOT00000049320 Uniprot:F1LWS9
Length = 465
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 54/165 (32%), Positives = 86/165 (52%)
Query: 139 AMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNA 198
A+DCEM ++G L+L RV +VD D++VI+ T+V+P + +Y +G+TE D+ N
Sbjct: 306 ALDCEM-SYTTHG-LEL-TRVTVVDTDQHVIYDTFVKPDNEIVDYNTMFSGVTETDLANT 362
Query: 199 -MPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAK 257
+ L +V+ +L + + E+ +L+GH LE DL L + + + DT+
Sbjct: 363 RVRLCDVQAVLLSLFST-ET------------ILIGHSLESDL--LALKFIHGTVVDTSV 407
Query: 258 YRPLMKTNLVSHSLKYLTRTYLGYDIQ--SGVHDPYEDCVSVMRL 300
P + SL+ LT YL IQ SG H ED + M+L
Sbjct: 408 LFPHHRGPPFKRSLRGLTSQYLNRIIQTDSGGHSSIEDATACMQL 452
>WB|WBGene00015462 [details] [associations]
symbol:C05C8.5 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:FO080353 PIR:T31744
RefSeq:NP_504838.1 ProteinModelPortal:O16312 SMR:O16312
PaxDb:O16312 EnsemblMetazoa:C05C8.5.1 EnsemblMetazoa:C05C8.5.2
GeneID:179116 KEGG:cel:CELE_C05C8.5 UCSC:C05C8.5 CTD:179116
WormBase:C05C8.5 HOGENOM:HOG000021553 InParanoid:O16312 OMA:DAWAAMR
NextBio:903992 Uniprot:O16312
Length = 594
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 55/166 (33%), Positives = 81/166 (48%)
Query: 139 AMDCEMVGGG-SNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKN 197
++DCEM +N L R+ +VDE EN I T V+P+ +T+Y +G+T + ++
Sbjct: 223 SVDCEMCETDVANREL---TRISIVDEFENTILDTLVKPEGRITDYVTRWSGITPDMMEG 279
Query: 198 AMP-LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTA 256
L +V+ I +L D +LVGH LEHDL +++M +P D
Sbjct: 280 VTTTLGDVQKAIQSLLP----------PDA---ILVGHSLEHDLQAMKMTHP--FCLDVG 324
Query: 257 KYRPLMKTNL-VSHSLKYLTRTYLGYDIQSGV-HDPYEDCVSVMRL 300
+N +SLK LT +LG IQS H YED + MRL
Sbjct: 325 HVLNYTNSNTEFRNSLKNLTELFLGAQIQSEFGHCSYEDAWAAMRL 370
>FB|FBgn0261548 [details] [associations]
symbol:CG42666 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014298 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 FlyBase:FBgn0261548 UniGene:Dm.19
GeneID:31136 KEGG:dme:Dmel_CG42666 GenomeRNAi:31136 NextBio:772085
EMBL:AY069617 RefSeq:NP_569945.1 SMR:Q8T023
EnsemblMetazoa:FBtr0302654 UCSC:CG14801-RB InParanoid:Q8T023
Uniprot:Q8T023
Length = 787
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 52/171 (30%), Positives = 88/171 (51%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A+DCEM G LD+ +V LV + +++ +V+P + +Y + +G+TE D
Sbjct: 618 PAVYALDCEMSYTGRG--LDV-TKVSLVALNGQLVYEHFVRPVCDIIDYNTQYSGITETD 674
Query: 195 I-KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
+ A L EV+ +L+++ D +L+GHGLE+DL +LR+ + + L
Sbjct: 675 LCSGAKSLAEVQRDLLQLIT---------ADT----ILIGHGLENDLRALRLVH--NTLI 719
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV----HDPYEDCVSVMRL 300
DT+ P +L++LT+ +L DIQ+G H +ED + M L
Sbjct: 720 DTSISFPHCNGFPYRRALRHLTKVHLKRDIQAGDGTTGHSSFEDSRACMEL 770
>POMBASE|SPAC1782.08c [details] [associations]
symbol:rex3 "exonuclease Rex3 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=ISO] [GO:0043628 "ncRNA 3'-end processing" evidence=ISO]
InterPro:IPR000571 InterPro:IPR006055 InterPro:IPR012337
PROSITE:PS50103 SMART:SM00479 PomBase:SPAC1782.08c Pfam:PF00929
GO:GO:0005739 GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0000467
GO:GO:0034476 PIR:T50098 RefSeq:NP_594715.1
ProteinModelPortal:Q9P7H2 EnsemblFungi:SPAC1782.08c.1
GeneID:2542165 KEGG:spo:SPAC1782.08c OMA:CETANSK OrthoDB:EOG48KVM8
NextBio:20803237 Uniprot:Q9P7H2
Length = 540
Score = 154 (59.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 47/157 (29%), Positives = 89/157 (56%)
Query: 149 SNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE-EDIKNAMPLKEVKDK 207
+NG ++L AR+ +V + E++I +++P+ + + +G+ + +++++ + + ++ K
Sbjct: 393 TNG-MEL-ARLTVVAK-ESIIMDVFIKPKGKILSLNTRFSGIHDAKELESGITMDQMYIK 449
Query: 208 ILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLV 267
I E+ N K +L+GHGLE+DL+++R+ + + DTA +
Sbjct: 450 IKELGMN------------KNTILIGHGLENDLNAMRLIHK--RVIDTALLFTHARGPPF 495
Query: 268 SHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRL--YK 302
+SLKYLT+ YLG IQ+ HD ED VS ++L YK
Sbjct: 496 RYSLKYLTKKYLGTTIQTSTHDSEEDAVSALQLVFYK 532
>DICTYBASE|DDB_G0281327 [details] [associations]
symbol:rexo4 "RNA exonuclease 4" species:44689
"Dictyostelium discoideum" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR012337
dictyBase:DDB_G0281327 Pfam:PF00929 GO:GO:0005634
GenomeReviews:CM000152_GR EMBL:AAFI02000040 GO:GO:0003676
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0004518 RefSeq:XP_640882.1 ProteinModelPortal:Q54U94
STRING:Q54U94 EnsemblProtists:DDB0305008 GeneID:8622938
KEGG:ddi:DDB_G0281327 OMA:NDIPESQ Uniprot:Q54U94
Length = 298
Score = 146 (56.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/174 (24%), Positives = 91/174 (52%)
Query: 136 KAVAMDCEMVG-GGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
K ++DC+++ G+ GTL +VC+ +++ +I+ V+P + ++R + TGLT +
Sbjct: 124 KFFSIDCKIIEIEGNKGTL---GKVCIANQNGQIIYEKIVKPMDKIVDFRTKFTGLTRDK 180
Query: 195 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRD 254
++ +E D L++ E +++ + ++LVGH L HDL +L++ + +LRD
Sbjct: 181 VQ-----REGTD-FLQVQKEVE---KIL----RHKILVGHDLVHDLKNLKLAHKKKLLRD 227
Query: 255 TAKYRPLMKTNLVSH-SLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQ 307
++ + S SLK + + L + + + D + + LYK+ +++
Sbjct: 228 ATQFTKFFNPDTNSEDSLKSIAKRELNFSPDNWDPNGKRDTIINVILYKQNQKE 281
>UNIPROTKB|F1P0Z1 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AADN02066720
IPI:IPI00599868 Ensembl:ENSGALT00000001557 Uniprot:F1P0Z1
Length = 1217
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 55/181 (30%), Positives = 91/181 (50%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A+DCEM G L+L RV +++ D V++ T+V+P V +Y +G+TEED
Sbjct: 1054 PGIFALDCEMCYT-KQG-LEL-TRVTVINSDLKVVYDTFVKPDTKVVDYNTRFSGVTEED 1110
Query: 195 IKN-AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
++N ++ L++V+ +L + + T +L+GH LE DL +L++ + +
Sbjct: 1111 LENTSITLRDVQAVLLNMFS--ADT-----------ILIGHSLESDLFALKLIHGTVV-- 1155
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRRQDHQV 311
DTA P +L+ L YL IQ V HD ED + M L ++D +V
Sbjct: 1156 DTAIVFPHRLGLPYKRALRTLMADYLKRIIQDNVEGHDSSEDARACMELMIWKIKEDSKV 1215
Query: 312 E 312
+
Sbjct: 1216 K 1216
>DICTYBASE|DDB_G0269694 [details] [associations]
symbol:pan2 "polyA specific ribonuclease subunit"
species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0031251 "PAN complex" evidence=ISS] [GO:0006397
"mRNA processing" evidence=ISS] [GO:0006301 "postreplication
repair" evidence=ISS] [GO:0004535 "poly(A)-specific ribonuclease
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 dictyBase:DDB_G0269694 Pfam:PF00929
EMBL:AAFI02000005 GenomeReviews:CM000150_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0006397 GO:GO:0003676 GO:GO:0006511
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221
GO:GO:0006301 GO:GO:0004535 KO:K12571 GO:GO:0031251 OMA:SKFGIED
RefSeq:XP_646196.2 ProteinModelPortal:Q55DD5
EnsemblProtists:DDB0237517 GeneID:8617149 KEGG:ddi:DDB_G0269694
InParanoid:Q55DD5 Uniprot:Q55DD5
Length = 1536
Score = 156 (60.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 68/245 (27%), Positives = 107/245 (43%)
Query: 106 PVPFEKTLSNAESQKKISGAIDEKRTCRGPKA--VAMDCEMVGGGSNGTLDLCARVCLVD 163
P+ F +N ++ AID + GP+ V+ D + V G L ARV ++
Sbjct: 1253 PINFTPATANTIPKENDLVAIDTEFVSIGPEETEVSSDGKRVII-QPGNFSL-ARVSIIR 1310
Query: 164 EDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLML 223
E+ F Y+Q PVT+Y +G+ D+ P K+ I L + R ++
Sbjct: 1311 ENGEAFFDDYIQSIEPVTDYLTRFSGINPGDLD---PKLSTKNVIT--LKSCYLKLRYLV 1365
Query: 224 DDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDI 283
D G VGHGL+ D + + P + + DT + L +S L++L L DI
Sbjct: 1366 DQGVK--FVGHGLKKDFRIINIYVPPNQIIDTVELFQLKNQRKLS--LRFLAYILLKIDI 1421
Query: 284 QSGVHDPYEDCVSVMRLYKRFRR--QDHQVEEIGNQ-NTTGSFDSYKYKELEKMSPNELY 340
QS H ED + M LYK + + ++ + +E N+ G S+K E + L
Sbjct: 1422 QSETHCSVEDAKTAMDLYKAYLQLVRNKEFDETLNKIYQIGRSLSFKVPE-PNIELQSLP 1480
Query: 341 QISKS 345
QI S
Sbjct: 1481 QIPSS 1485
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43
+T+ +KC+ C Q++++ ++ I Y + Q
Sbjct: 778 TTSSNKCINCGHQYEKQSRQFQY-DIVYPNTPQ 809
>UNIPROTKB|A0PJM3 [details] [associations]
symbol:REXO1L2P "Putative exonuclease GOR-like protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AF279874 IPI:IPI00937866
UniGene:Hs.535056 ProteinModelPortal:A0PJM3 SMR:A0PJM3 PRIDE:A0PJM3
UCSC:uc010mgi.2 GeneCards:GC08M086790 HGNC:HGNC:32239
neXtProt:NX_A0PJM3 HOGENOM:HOG000112759 HOVERGEN:HBG107960
InParanoid:A0PJM3 OrthoDB:EOG4PZJ5X ArrayExpress:A0PJM3
Genevestigator:A0PJM3 Uniprot:A0PJM3
Length = 583
Score = 143 (55.4 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A+DCEM ++G L+L RV +VD D V++ T+V+P + +Y +G+TE D
Sbjct: 407 PGIYALDCEMCYT-THG-LEL-TRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEAD 463
Query: 195 I-KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
+ K ++ L +V+ +L + T +L+GH LE DL +L++ + +
Sbjct: 464 VAKTSITLPQVQAILLSFFS--AQT-----------ILIGHSLESDLLALKLIHSTVV-- 508
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRRQDHQV 311
DTA P SL+ L YL IQ H+ ED + ++L RQ Q+
Sbjct: 509 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 568
Query: 312 E 312
+
Sbjct: 569 Q 569
Score = 45 (20.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 94 LIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRT 131
L + +SAP KT++++ S ++G D KRT
Sbjct: 100 LTERPSGVRISAPRK-RKTIAHSSSPCLVTGYTDAKRT 136
>TAIR|locus:2145244 [details] [associations]
symbol:AT5G25800 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR017849 SMART:SM00479 Pfam:PF00929 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
Gene3D:3.40.720.10 EMBL:AC005405 KO:K14570 EMBL:AY128370
IPI:IPI00537859 IPI:IPI00915141 RefSeq:NP_197952.2 UniGene:At.30891
ProteinModelPortal:Q8L7M4 SMR:Q8L7M4 PaxDb:Q8L7M4 PRIDE:Q8L7M4
EnsemblPlants:AT5G25800.1 GeneID:832649 KEGG:ath:AT5G25800
TAIR:At5g25800 HOGENOM:HOG000244006 OMA:KETILVG PhylomeDB:Q8L7M4
ProtClustDB:CLSN2681069 Genevestigator:Q8L7M4 Uniprot:Q8L7M4
Length = 567
Score = 145 (56.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 53/170 (31%), Positives = 85/170 (50%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P+ VA+DCEM G L+L RV LVD V+ V P P+T+Y +G+T
Sbjct: 213 PEIVALDCEMCIT-KEG-LEL-TRVTLVDIQGQVLLDKLVMPTNPITDYNTRYSGITAVM 269
Query: 195 IKNAMP-LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
++ LK+++++ L+++ K +LVGH LE+DL SL++++ +++
Sbjct: 270 MEGVTTTLKDIQEEFLKLVF-------------KETILVGHSLENDLLSLKISH--NLVI 314
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQ---SGVHDPYEDCVSVMRL 300
DTA L+ L + +L +IQ SG HD ED + M L
Sbjct: 315 DTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESG-HDSAEDAKAAMDL 363
>UNIPROTKB|Q8IX06 [details] [associations]
symbol:REXO1L1 "Exonuclease GOR" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
HOGENOM:HOG000112759 HOVERGEN:HBG107960 OrthoDB:EOG4PZJ5X
EMBL:AC093331 EMBL:AF495523 EMBL:AF023669 IPI:IPI00892939
RefSeq:NP_758439.4 UniGene:Hs.373854 ProteinModelPortal:Q8IX06
SMR:Q8IX06 STRING:Q8IX06 PhosphoSite:Q8IX06 DMDM:205831276
PaxDb:Q8IX06 PRIDE:Q8IX06 DNASU:254958 Ensembl:ENST00000379010
GeneID:254958 KEGG:hsa:254958 UCSC:uc022axf.1 CTD:254958
GeneCards:GC08M086568 H-InvDB:HIX0034285 H-InvDB:HIX0168820
H-InvDB:HIX0188684 H-InvDB:HIX0188686 H-InvDB:HIX0188687
H-InvDB:HIX0188688 H-InvDB:HIX0188689 H-InvDB:HIX0188690
HGNC:HGNC:24660 neXtProt:NX_Q8IX06 PharmGKB:PA142671078
InParanoid:Q8IX06 KO:K14570 OMA:RIARIPM GenomeRNAi:254958
NextBio:92431 Bgee:Q8IX06 CleanEx:HS_REXO1L1 Genevestigator:Q8IX06
Uniprot:Q8IX06
Length = 675
Score = 144 (55.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A+DCEM ++G L+L RV +VD D V++ T+V+P + +Y +G+TE D
Sbjct: 499 PGIYALDCEMCYT-THG-LEL-TRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEAD 555
Query: 195 I-KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
+ K ++ L +V+ +L + T +L+GH LE DL +L++ + +
Sbjct: 556 VAKTSITLPQVQAILLSFFS--AQT-----------ILIGHSLESDLLALKLIHSTVV-- 600
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRRQDHQV 311
DTA P SL+ L YL IQ H+ ED + ++L RQ Q+
Sbjct: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDASACLQLVMWKVRQRAQI 660
Query: 312 E 312
+
Sbjct: 661 Q 661
Score = 45 (20.9 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 94 LIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRT 131
L + +SAP KT++++ S ++G D KRT
Sbjct: 192 LTERPSGVRISAPRK-RKTIAHSSSPCLVTGYTDAKRT 228
>UNIPROTKB|H0YMM4 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
HGNC:HGNC:6130 ChiTaRS:ISG20 EMBL:AC104259 Ensembl:ENST00000559876
Bgee:H0YMM4 Uniprot:H0YMM4
Length = 155
Score = 121 (47.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
+ VAMDCEMVG G + L AR LV+ V++ +++P+ +T+YR V+G+T + +
Sbjct: 6 EVVAMDCEMVGLGPHRESGL-ARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHM 64
Query: 196 KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLL 231
A P + LE L + +G + D RLL
Sbjct: 65 VGATPFAVAR---LEALKE-DMSGYTIYDTSTDRLL 96
>UNIPROTKB|F5GW92 [details] [associations]
symbol:REXO1L10P "Protein REXO1L10P" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 IPI:IPI00937866
HGNC:HGNC:32239 KO:K14570 EMBL:AC232323 RefSeq:XP_002342903.1
Ensembl:ENST00000425429 Ensembl:ENST00000540724 GeneID:100288562
KEGG:hsa:100288562 OMA:VIHCTVV NextBio:20778309 Uniprot:F5GW92
Length = 675
Score = 143 (55.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A+DCEM ++G L+L RV +VD D V++ T+V+P + +Y +G+TE D
Sbjct: 499 PGIYALDCEMCYT-THG-LEL-TRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEAD 555
Query: 195 I-KNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
+ K ++ L +V+ +L + T +L+GH LE DL +L++ + +
Sbjct: 556 VAKTSITLPQVQAILLSFFS--AQT-----------ILIGHSLESDLLALKLIHSTVV-- 600
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRRQDHQV 311
DTA P SL+ L YL IQ H+ ED + ++L RQ Q+
Sbjct: 601 DTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDANACLQLVMWKVRQRAQI 660
Query: 312 E 312
+
Sbjct: 661 Q 661
Score = 45 (20.9 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 94 LIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRT 131
L + +SAP KT++++ S ++G D KRT
Sbjct: 192 LTERPSGVRISAPRK-RKTIAHSSSPCLVTGYTDAKRT 228
>TAIR|locus:2083153 [details] [associations]
symbol:AT3G50090 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL132978 KO:K14570
HOGENOM:HOG000083886 IPI:IPI00524773 PIR:T45862 RefSeq:NP_190578.1
UniGene:At.53865 ProteinModelPortal:Q9SN09 SMR:Q9SN09
EnsemblPlants:AT3G50090.1 GeneID:824171 KEGG:ath:AT3G50090
TAIR:At3g50090 InParanoid:Q9SN09 OMA:FLHRIPH PhylomeDB:Q9SN09
ProtClustDB:CLSN2914751 Genevestigator:Q9SN09 Uniprot:Q9SN09
Length = 322
Score = 128 (50.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 32/90 (35%), Positives = 53/90 (58%)
Query: 138 VAMDCEMV--GGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
+A+DCEMV G+ G + RV VD + VI +V+P PV +YR +TG+T ED+
Sbjct: 76 LALDCEMVLCEDGTEGVV----RVGAVDRNLKVILDEFVKPHKPVVDYRTAITGVTAEDV 131
Query: 196 KNA-MPLKEVKDKILEILNNGESTGRLMLD 224
+ A + L ++++K+ L S G +++D
Sbjct: 132 QKATLSLVDIQEKLRPFL----SAGAILID 157
Score = 49 (22.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 270 SLKYLTRTYLGYDIQ-SGV-HDPYEDCVSVMRL 300
SL L + LGY++Q +GV H D + M+L
Sbjct: 180 SLNTLCMSVLGYEVQKAGVSHHCVHDAAAAMKL 212
>FB|FBgn0035707 [details] [associations]
symbol:CG8368 species:7227 "Drosophila melanogaster"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 EMBL:AE014296 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
KO:K14570 GeneTree:ENSGT00630000089807 EMBL:BT023775
RefSeq:NP_648050.1 RefSeq:NP_729177.1 UniGene:Dm.30144 SMR:Q9VRX7
IntAct:Q9VRX7 MINT:MINT-298361 EnsemblMetazoa:FBtr0076976
EnsemblMetazoa:FBtr0076977 GeneID:38740 KEGG:dme:Dmel_CG8368
UCSC:CG8368-RA FlyBase:FBgn0035707 InParanoid:Q9VRX7 OMA:DKFPRTK
OrthoDB:EOG49P8DJ GenomeRNAi:38740 NextBio:810128 Uniprot:Q9VRX7
Length = 681
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 52/200 (26%), Positives = 93/200 (46%)
Query: 106 PVPFEKTLSNAESQKKISGAIDEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDED 165
P+P + L K + + T R P +DCEM + G +L R+ +V+E+
Sbjct: 326 PIPLQGELHTRFQNFKFTKDLYAPVTNRSPM-FGVDCEMCHTEA-GCNEL-TRISIVNEN 382
Query: 166 ENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDD 225
++ T V P +T+Y + +G+T E + E K L+++ + L+ D
Sbjct: 383 YETVYETLVLPNNRITDYLTQYSGITAE-------IMEQVTKRLDVVQ--KEVSELLPPD 433
Query: 226 GKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQS 285
+LVG L DL++++M +P +++ DT+ LK L +T+L IQ
Sbjct: 434 A---ILVGQSLNSDLNAMKMMHP-YVI-DTSVCFNTSGVRRRKTKLKDLAKTFLQEIIQE 488
Query: 286 GV--HDPYEDCVSVMRLYKR 303
+ HD ED + ++L K+
Sbjct: 489 NIDGHDSIEDSRATLKLVKK 508
>ZFIN|ZDB-GENE-061013-448 [details] [associations]
symbol:zgc:152968 "zgc:152968" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 ZFIN:ZDB-GENE-061013-448 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:CR762466 IPI:IPI00870950
ProteinModelPortal:B8JII5 Ensembl:ENSDART00000139636
HOVERGEN:HBG106838 OMA:DPMEECY ArrayExpress:B8JII5 Bgee:B8JII5
Uniprot:B8JII5
Length = 1251
Score = 142 (55.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 55/187 (29%), Positives = 89/187 (47%)
Query: 130 RTCRGPKAV-AMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVT 188
+TC G A+ C G L+L ARV +V V+F ++V+P V +Y +
Sbjct: 1084 KTCPGIYAIDTQTCYTTQG-----LEL-ARVTVVSSSLQVVFDSFVKPDNDVIDYNTRFS 1137
Query: 189 GLTEEDIKNAMP-LKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNY 247
G++E D+K++ L++V+ +L +N T +L+GHGLE+DL +L++ +
Sbjct: 1138 GISEADVKSSSSSLRDVQAVLLSFIN--ADT-----------ILIGHGLENDLAALKIIH 1184
Query: 248 PDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFR 305
+ DT+ P L LT YL IQ V HD ED + M L
Sbjct: 1185 STVV--DTSVVFPHRLGLPHKRELNSLTADYLRRIIQESVEGHDTREDATACMELMLWRV 1242
Query: 306 RQDHQVE 312
++D +V+
Sbjct: 1243 KEDSKVK 1249
>UNIPROTKB|H3BLY5 [details] [associations]
symbol:ISG20 "Interferon-stimulated gene 20 kDa protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676
InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:6130 ChiTaRS:ISG20
EMBL:AC104259 ProteinModelPortal:H3BLY5 SMR:H3BLY5
Ensembl:ENST00000379224 Bgee:H3BLY5 Uniprot:H3BLY5
Length = 87
Score = 112 (44.5 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDI 195
+ VAMDCEMVG G + L AR LV+ V++ +++P+ +T+YR V+G+T + +
Sbjct: 6 EVVAMDCEMVGLGPHRESGL-ARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHM 64
Query: 196 KNAMP 200
A P
Sbjct: 65 VGATP 69
>SGD|S000003062 [details] [associations]
symbol:PAN2 "Essential subunit of the Pan2p-Pan3p
poly(A)-ribonuclease complex" species:4932 "Saccharomyces
cerevisiae" [GO:0004535 "poly(A)-specific ribonuclease activity"
evidence=IEA;IMP;IPI] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=IEA] [GO:0006301 "postreplication repair"
evidence=IGI;IPI] [GO:0006397 "mRNA processing"
evidence=IEA;IMP;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP;IPI] [GO:0031251 "PAN complex" evidence=IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50235 PROSITE:PS50294
SMART:SM00479 SGD:S000003062 Pfam:PF00929 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BK006941 GO:GO:0003676
GO:GO:0090305 GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0006301 GO:GO:0004535
GO:GO:0031124 KO:K12571 HOGENOM:HOG000230585 OrthoDB:EOG44F9J8
GeneTree:ENSGT00390000013978 GO:GO:0031251 EMBL:U39204 EMBL:Z72616
PIR:S64101 RefSeq:NP_011421.1 ProteinModelPortal:P53010 SMR:P53010
DIP:DIP-2466N IntAct:P53010 MINT:MINT-637100 STRING:P53010
PaxDb:P53010 EnsemblFungi:YGL094C GeneID:852786 KEGG:sce:YGL094C
CYGD:YGL094c OMA:SKFGIED NextBio:972276 Genevestigator:P53010
GermOnline:YGL094C Uniprot:P53010
Length = 1115
Score = 138 (53.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 37/107 (34%), Positives = 54/107 (50%)
Query: 230 LLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHD 289
+ VGHGL +D + +N P + +RDTA Y K L SL+YL LG +IQ G HD
Sbjct: 1011 VFVGHGLNNDFKHININVPRNQIRDTAIYFLQGKRYL---SLRYLAYVLLGMNIQEGNHD 1067
Query: 290 PYEDCVSVMRLYKRFRRQDHQV--EEIGNQ-NTTGSFDSYKYKELEK 333
ED + + LYK++ + E++ N G ++K E K
Sbjct: 1068 SIEDAHTALILYKKYLHLKEKAIFEKVLNSVYEEGRAHNFKVPETSK 1114
>UNIPROTKB|F1SDH3 [details] [associations]
symbol:LOC100525449 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:FP236669
EMBL:FP102751 RefSeq:XP_003123050.1 RefSeq:XP_003123064.2
UniGene:Ssc.70280 Ensembl:ENSSSCT00000014685
Ensembl:ENSSSCT00000014691 GeneID:100513338 GeneID:100525449
KEGG:ssc:100513338 KEGG:ssc:100525449 Uniprot:F1SDH3
Length = 1211
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 49/169 (28%), Positives = 82/169 (48%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A+DCEM + L+L RV +VD D V++ T+V+P + +Y +G+TE D
Sbjct: 1048 PGIYALDCEM--SYTTYGLEL-TRVTVVDTDLQVVYDTFVRPDNEIVDYNTRFSGVTEAD 1104
Query: 195 IKN-AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
+ + ++ L++V+ +L + ++ +L+GH LE DL +L++ + +
Sbjct: 1105 LADTSISLRDVQAVLLSMFSSDT-------------ILIGHSLESDLLALKVIHSTVV-- 1149
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRL 300
DT+ P SL+ L YL IQ V H ED + M L
Sbjct: 1150 DTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHL 1198
>CGD|CAL0006310 [details] [associations]
symbol:orf19.4948 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IEA]
[GO:0034476 "U5 snRNA 3'-end processing" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
CGD:CAL0006310 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0004527 GO:GO:0090305 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000010
EMBL:AACQ01000009 GO:GO:0006364 RefSeq:XP_722159.1
RefSeq:XP_722272.1 ProteinModelPortal:Q5AL29 STRING:Q5AL29
GeneID:3636061 GeneID:3636164 KEGG:cal:CaO19.12413
KEGG:cal:CaO19.4948 Uniprot:Q5AL29
Length = 404
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/186 (25%), Positives = 92/186 (49%)
Query: 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDE-DENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
+ + +DCEM G + G +L R+ +D + +++P + ++ +G+
Sbjct: 240 RVLGIDCEM-GFTTKG-FELM-RITAIDYFTSKTVLDIFIKPIGEIVDFNTRYSGI---- 292
Query: 195 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRD 254
E+ D L + E G +M D + +L+GHGLE+D++++R+ + + + D
Sbjct: 293 -------HELTDDFLSWEQSMEKLGEIM--DSET-ILIGHGLENDMNAMRLIHEN--IID 340
Query: 255 TAKYRP-LMKTNLVSH-SLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQVE 312
T+ P KT SLK L +L IQ+G HD ED ++ + + K F ++ Q++
Sbjct: 341 TSILFPNKWKTGPTRRWSLKDLAFEFLSRRIQTGEHDSCEDSIAAIDIVKYFVKK--QLQ 398
Query: 313 EIGNQN 318
IG+ +
Sbjct: 399 SIGSSS 404
>UNIPROTKB|Q8N1G1 [details] [associations]
symbol:REXO1 "RNA exonuclease 1 homolog" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AC012615
OrthoDB:EOG4PZJ5X KO:K14570 EMBL:AB032964 EMBL:BC032244
IPI:IPI00297396 RefSeq:NP_065746.3 UniGene:Hs.192477
ProteinModelPortal:Q8N1G1 SMR:Q8N1G1 IntAct:Q8N1G1
MINT:MINT-1401484 STRING:Q8N1G1 PhosphoSite:Q8N1G1 DMDM:296452990
PaxDb:Q8N1G1 PRIDE:Q8N1G1 Ensembl:ENST00000170168 GeneID:57455
KEGG:hsa:57455 UCSC:uc002lua.4 CTD:57455 GeneCards:GC19M001815
H-InvDB:HIX0014594 H-InvDB:HIX0027481 HGNC:HGNC:24616 HPA:HPA042155
HPA:HPA042552 MIM:609614 neXtProt:NX_Q8N1G1 PharmGKB:PA142671077
HOGENOM:HOG000039979 HOVERGEN:HBG090644 InParanoid:Q8N1G1
OMA:VAYDRSP GenomeRNAi:57455 NextBio:63632 ArrayExpress:Q8N1G1
Bgee:Q8N1G1 CleanEx:HS_REXO1 Genevestigator:Q8N1G1
GermOnline:ENSG00000079313 Uniprot:Q8N1G1
Length = 1221
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 50/169 (29%), Positives = 83/169 (49%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A+DCEM + L+L RV +VD D +V++ T+V+P + +Y +G+TE D
Sbjct: 1058 PGIYALDCEM--SYTTYGLEL-TRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEAD 1114
Query: 195 IKN-AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
+ + ++ L++V+ +L + + T +L+GH LE DL +L++ + +
Sbjct: 1115 LADTSVTLRDVQAVLLSMFS--ADT-----------ILIGHSLESDLLALKVIHSTVV-- 1159
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRL 300
DT+ P SL+ L YL IQ V H ED + M L
Sbjct: 1160 DTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHL 1208
>CGD|CAL0004517 [details] [associations]
symbol:orf19.4764 species:5476 "Candida albicans" [GO:0031251
"PAN complex" evidence=IEA] [GO:0031124 "mRNA 3'-end processing"
evidence=IEA] [GO:0006301 "postreplication repair" evidence=IEA]
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001394 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50235 PROSITE:PS50294 SMART:SM00479 CGD:CAL0004517
Pfam:PF00929 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0006397 GO:GO:0003676 GO:GO:0090305
GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0004221 GO:GO:0004535
RefSeq:XP_723261.1 RefSeq:XP_723450.1 ProteinModelPortal:Q5APK0
STRING:Q5APK0 GeneID:3634773 GeneID:3635119 KEGG:cal:CaO19.12228
KEGG:cal:CaO19.4764 KO:K12571 Uniprot:Q5APK0
Length = 1190
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 42/151 (27%), Positives = 71/151 (47%)
Query: 157 ARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGE 216
AR+ ++ E+ Y+ + +Y +G+ D+ + +E L L
Sbjct: 1021 ARISVLRENGIPFIDDYIVHTSDIYDYLTNFSGIEPNDLNLTLSNREN----LVTLQTAY 1076
Query: 217 STGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAK--YRPLMKTNLVSHSLKYL 274
L+L+ G + VGHGL +D ++ + P+ +RDTA Y+ K L SLK+L
Sbjct: 1077 RKLWLLLNLGV--IFVGHGLYNDFRTINLQVPERQIRDTAVIYYKSDFKRQL---SLKFL 1131
Query: 275 TRTYLGYDIQSGVHDPYEDCVSVMRLYKRFR 305
L +QSG HD ED + + LYK+++
Sbjct: 1132 AYVMLKEKVQSGNHDSIEDANTALLLYKKYQ 1162
>UNIPROTKB|E1BDF8 [details] [associations]
symbol:LOC788506 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0005634 GO:GO:0003676
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 OMA:VAYDRSP
EMBL:DAAA02020285 IPI:IPI00700340 RefSeq:NP_001179237.1
UniGene:Bt.25942 Ensembl:ENSBTAT00000026945 GeneID:512048
KEGG:bta:512048 NextBio:20870228 Uniprot:E1BDF8
Length = 1211
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 49/169 (28%), Positives = 81/169 (47%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A+DCEM + L+L RV +VD D V++ T+V+P + +Y +G+TE D
Sbjct: 1048 PGVYALDCEM--SYTTYGLEL-TRVTVVDTDLQVVYDTFVRPDNEIVDYNTRFSGVTEAD 1104
Query: 195 IKN-AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
+ + ++ L++V+ +L + ++ +L+GH LE DL L++ + +
Sbjct: 1105 LADTSISLRDVQAVLLSMFSSDT-------------VLIGHSLESDLLCLQVIHSTVV-- 1149
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRL 300
DT+ P SL+ L YL IQ V H ED + M L
Sbjct: 1150 DTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHL 1198
>UNIPROTKB|E2R2J6 [details] [associations]
symbol:ZNF319 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] Pfam:PF00096 InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.160.60 Ensembl:ENSCAFT00000013578
Uniprot:E2R2J6
Length = 564
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
+KC C K F + HL+ H + HS +P KCAVC+K K L H+ + H
Sbjct: 212 YKCTLCDKSFSQSSHLVHHKRT--HSSERPYKCAVCEKTFKHRSHLVRHMYAHSGEHH-- 267
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109
+F CN+C F S L++H C+ S PF
Sbjct: 268 -LFR---CNVCELHFKESSELLQHP--CTPSGERPF 297
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 37/116 (31%), Positives = 52/116 (44%)
Query: 16 KCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
KC C+K F + L+ H K + +P KC VC K K +L++H AHCS
Sbjct: 382 KCPVCHKGFDQSAELLRH-KCLPGAAERPFKCPVCNKAYKRASALQKH-----QLAHCSA 435
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKR 130
C LC F S S ++H+ C P EK L + +K+ A D +R
Sbjct: 436 AEKPLRCTLCERRFFSSSEFVQHR--CD---PAR-EKPLKCPDCEKRFKYASDLQR 485
>MGI|MGI:1890618 [details] [associations]
symbol:Zfp319 "zinc finger protein 319" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
MGI:MGI:1890618 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 eggNOG:COG5048
Gene3D:3.30.160.60 HOVERGEN:HBG018163 HOGENOM:HOG000234617
OMA:AQHHSAH OrthoDB:EOG4WH8KH EMBL:AF288403 EMBL:BC059823
IPI:IPI00112643 RefSeq:NP_077787.3 UniGene:Mm.350514
UniGene:Mm.440387 ProteinModelPortal:Q9ERR8 SMR:Q9ERR8
PhosphoSite:Q9ERR8 PRIDE:Q9ERR8 Ensembl:ENSMUST00000057717
GeneID:79233 KEGG:mmu:79233 UCSC:uc009myf.1 CTD:79233
GeneTree:ENSGT00600000084559 InParanoid:Q9ERR8 ChiTaRS:ZNF319
NextBio:349889 Bgee:Q9ERR8 CleanEx:MM_ZFP319 Genevestigator:Q9ERR8
GermOnline:ENSMUSG00000046556 Uniprot:Q9ERR8
Length = 581
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
+KC C K F + HL+ H + HS +P KCAVC+K K L H+ + H
Sbjct: 229 YKCTLCDKSFSQSSHLVHHKRT--HSSERPYKCAVCEKTFKHRSHLVRHMYAHSGEHH-- 284
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109
+F CN+C F S L++H C+ S PF
Sbjct: 285 -LFR---CNVCELHFKESSELLQHP--CTPSGERPF 314
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00056
Identities = 38/116 (32%), Positives = 52/116 (44%)
Query: 16 KCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
KC C K F + L+ H K S +P KC VC K K +L++H LS HC+
Sbjct: 399 KCPVCQKGFDQSAELLRH-KCLPTSTERPFKCPVCNKAYKRASALQKH---QLS--HCAA 452
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKR 130
C LC F S S ++H+ C P EK L + +K+ A D +R
Sbjct: 453 AEKPLRCTLCERRFFSSSEFVQHR--CD---PAR-EKPLKCPDCEKRFKYASDLQR 502
>RGD|1306198 [details] [associations]
symbol:Zfp319 "zinc finger protein 319" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00096 InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 RGD:1306198 GO:GO:0005634
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.160.60 EMBL:CH474006
OMA:AQHHSAH OrthoDB:EOG4WH8KH CTD:79233
GeneTree:ENSGT00600000084559 IPI:IPI00359069 RefSeq:NP_001163949.1
UniGene:Rn.144767 Ensembl:ENSRNOT00000017971 GeneID:291849
KEGG:rno:291849 UCSC:RGD:1306198 NextBio:633278 Uniprot:D4AEC6
Length = 581
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
+KC C K F + HL+ H + HS +P KCAVC+K K L H+ + H
Sbjct: 229 YKCTLCDKSFSQSSHLVHHKRT--HSSERPYKCAVCEKTFKHRSHLVRHMYAHSGEHH-- 284
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109
+F CN+C F S L++H C+ S PF
Sbjct: 285 -LFR---CNVCELHFKESSELLQHP--CTPSGERPF 314
Score = 118 (46.6 bits), Expect = 0.00056, P = 0.00056
Identities = 38/116 (32%), Positives = 52/116 (44%)
Query: 16 KCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
KC C K F + L+ H K S +P KC VC K K +L++H LS HC+
Sbjct: 399 KCPVCQKGFDQSAELLRH-KCLPGSTERPFKCPVCNKAYKRASALQKH---QLS--HCAA 452
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKR 130
C LC F S S ++H+ C P EK L + +K+ A D +R
Sbjct: 453 AEKPLRCTLCERRFFSSSEFVQHR--CD---PTR-EKPLKCPDCEKRFKYASDLQR 502
>UNIPROTKB|Q9P2F9 [details] [associations]
symbol:ZNF319 "Zinc finger protein 319" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 eggNOG:COG5048 Gene3D:3.30.160.60
HOVERGEN:HBG018163 HOGENOM:HOG000234617 EMBL:AB037809 EMBL:BC093919
EMBL:BC101767 IPI:IPI00023084 RefSeq:NP_065858.1 UniGene:Hs.129268
ProteinModelPortal:Q9P2F9 SMR:Q9P2F9 PhosphoSite:Q9P2F9
DMDM:25091755 PRIDE:Q9P2F9 DNASU:57567 Ensembl:ENST00000299237
GeneID:57567 KEGG:hsa:57567 UCSC:uc002emx.1 CTD:57567
GeneCards:GC16M058028 HGNC:HGNC:13644 neXtProt:NX_Q9P2F9
PharmGKB:PA134937483 InParanoid:Q9P2F9 OMA:AQHHSAH
OrthoDB:EOG4WH8KH PhylomeDB:Q9P2F9 GenomeRNAi:57567 NextBio:64078
Bgee:Q9P2F9 CleanEx:HS_ZNF319 Genevestigator:Q9P2F9
GermOnline:ENSG00000166188 Uniprot:Q9P2F9
Length = 582
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
+KC C K F + HL+ H + HS +P KCAVC+K K L H+ + H
Sbjct: 230 YKCTLCDKSFSQSSHLVHHKRT--HSSERPYKCAVCEKTFKHRSHLVRHMYAHSGEHH-- 285
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109
+F CN+C F S L++H C+ S PF
Sbjct: 286 -LFR---CNVCELHFKESSELLQHP--CTPSGERPF 315
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 36/116 (31%), Positives = 51/116 (43%)
Query: 16 KCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
KC C K F + L+ H K + +P KC VC K K +L++H AHC+
Sbjct: 400 KCPVCQKGFDQSAELLRH-KCLPGAAERPFKCPVCNKAYKRASALQKH-----QLAHCAA 453
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKR 130
C LC F S S ++H+ C P EK L + +K+ A D +R
Sbjct: 454 AEKPLRCTLCERRFFSSSEFVQHR--CD---PAR-EKPLKCPDCEKRFKYASDLQR 503
>UNIPROTKB|F6XDE4 [details] [associations]
symbol:ZNF319 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] Pfam:PF00096 InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.160.60 CTD:57567 OMA:AQHHSAH
GeneTree:ENSGT00600000084559 Ensembl:ENSCAFT00000013578
EMBL:AAEX03001564 RefSeq:XP_544384.2 GeneID:487258 KEGG:cfa:487258
Uniprot:F6XDE4
Length = 586
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
+KC C K F + HL+ H + HS +P KCAVC+K K L H+ + H
Sbjct: 234 YKCTLCDKSFSQSSHLVHHKRT--HSSERPYKCAVCEKTFKHRSHLVRHMYAHSGEHH-- 289
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109
+F CN+C F S L++H C+ S PF
Sbjct: 290 -LFR---CNVCELHFKESSELLQHP--CTPSGERPF 319
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 37/116 (31%), Positives = 52/116 (44%)
Query: 16 KCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
KC C+K F + L+ H K + +P KC VC K K +L++H AHCS
Sbjct: 404 KCPVCHKGFDQSAELLRH-KCLPGAAERPFKCPVCNKAYKRASALQKH-----QLAHCSA 457
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKR 130
C LC F S S ++H+ C P EK L + +K+ A D +R
Sbjct: 458 AEKPLRCTLCERRFFSSSEFVQHR--CD---PAR-EKPLKCPDCEKRFKYASDLQR 507
>UNIPROTKB|G3N1Z7 [details] [associations]
symbol:ZNF319 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005634 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.160.60
CTD:57567 OMA:AQHHSAH GeneTree:ENSGT00600000084559
EMBL:DAAA02046534 RefSeq:XP_002694843.1 RefSeq:XP_876198.2
Ensembl:ENSBTAT00000063509 GeneID:618783 KEGG:bta:618783
NextBio:20901348 Uniprot:G3N1Z7
Length = 586
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
+KC C K F + HL+ H + HS +P KCAVC+K K L H+ + H
Sbjct: 234 YKCTLCDKSFSQSSHLVHHKRT--HSSERPYKCAVCEKTFKHRSHLVRHMYAHSGEHH-- 289
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109
+F CN+C F S L++H C+ S PF
Sbjct: 290 -LFR---CNVCELHFKESSELLQHP--CTPSGERPF 319
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 37/116 (31%), Positives = 50/116 (43%)
Query: 16 KCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
KC C K F + L+ H K + +P KC VC K K +L++H AHCS
Sbjct: 404 KCPVCQKGFDQSAELLRH-KCLPGAAERPFKCPVCHKAYKRASALQKH-----QLAHCSA 457
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKR 130
C LC F S S ++H+ C P EK L + K+ A D +R
Sbjct: 458 AEKPLRCTLCERRFFSSSEFVQHR--CD---PAR-EKPLKCPDCDKRFKYASDLQR 507
>ZFIN|ZDB-GENE-030131-1650 [details] [associations]
symbol:rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-030131-1650 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 KO:K14570
GeneTree:ENSGT00630000089807 CTD:57455 HOGENOM:HOG000039979
HOVERGEN:HBG090644 OMA:GGWETSY EMBL:BX511253 IPI:IPI00896271
RefSeq:NP_001119888.1 UniGene:Dr.64589 Ensembl:ENSDART00000079618
GeneID:564551 KEGG:dre:564551 NextBio:20885442 Uniprot:B0S6F3
Length = 1207
Score = 139 (54.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 52/177 (29%), Positives = 90/177 (50%)
Query: 139 AMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNA 198
A+DCEM G L+L RV +++ + V++ T+V+P V +Y +G+T +D++N
Sbjct: 1048 ALDCEMCYT-KQG-LEL-TRVTVINSELKVVYDTFVKPGSRVVDYNTRFSGVTADDLENT 1104
Query: 199 -MPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAK 257
+ L++V+ +L + + +S +L+GH LE DL +L++ + M+ DTA
Sbjct: 1105 TISLRDVQAVLLSMFS-ADS------------ILIGHSLESDLFALKLIHS--MVVDTAI 1149
Query: 258 YRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRLYKRFRRQDHQVE 312
P +L+ L YL IQ V HD ED + M L ++D +V+
Sbjct: 1150 VFPHRLGLPYKRALRNLMADYLKRIIQDNVGGHDSSEDARACMELMIWKIKEDAKVK 1206
Score = 40 (19.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 72 CSGIFSDRGCNLC 84
CSG GC +C
Sbjct: 1003 CSGAVGSPGCEVC 1015
>CGD|CAL0006149 [details] [associations]
symbol:orf19.6195 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease
activity" evidence=IEA] [GO:0034415 "tRNA 3'-trailer cleavage,
exonucleolytic" evidence=IEA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IEA] [GO:0000467 "exonucleolytic trimming to
generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0002107 "generation of mature 3'-end of 5S rRNA generated by
RNA polymerase III" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 CGD:CAL0006149 Pfam:PF00929
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000038
EMBL:AACQ01000037 KO:K14570 RefSeq:XP_718702.1 RefSeq:XP_718786.1
ProteinModelPortal:Q5AAW5 GeneID:3639488 GeneID:3639626
KEGG:cal:CaO19.13575 KEGG:cal:CaO19.6195 Uniprot:Q5AAW5
Length = 744
Score = 129 (50.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 48/174 (27%), Positives = 84/174 (48%)
Query: 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
R + A+DCE G+ L R+ L+D + V+ V+P+ +T+Y + +G+TE
Sbjct: 334 RKSRIYALDCEFCKAGAKQVL---TRISLLDFEAKVVMDELVKPKEEITDYVTKYSGITE 390
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
E L++V I +I N +T + D +L+GH LE DL+ +++ + D+++
Sbjct: 391 E------LLRDVTTTIEDIQNLFVNT--VSQQD----ILIGHSLESDLNVMKIKH-DNIV 437
Query: 253 RDTAKYR----PLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYK 302
+ Y P K +L S + K+L R + Q H ED + + L K
Sbjct: 438 DTSIIYEHNRGPPSKPSLKSLAEKHLNRQIQAGEGQGLGHSSIEDAKACLDLVK 491
>MGI|MGI:1914182 [details] [associations]
symbol:Rexo1 "REX1, RNA exonuclease 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:1914182
GO:GO:0005634 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
eggNOG:COG0847 InterPro:IPR013520 SUPFAM:SSF53098 OrthoDB:EOG4PZJ5X
KO:K14570 GeneTree:ENSGT00630000089807 CTD:57455
HOGENOM:HOG000039979 HOVERGEN:HBG090644 OMA:VAYDRSP EMBL:AK173108
EMBL:AK006228 EMBL:AK144769 EMBL:BC039623 EMBL:BC052424
EMBL:BC069964 IPI:IPI00469996 IPI:IPI00759993 RefSeq:NP_080128.2
UniGene:Mm.1116 ProteinModelPortal:Q7TT28 SMR:Q7TT28 IntAct:Q7TT28
PhosphoSite:Q7TT28 PRIDE:Q7TT28 Ensembl:ENSMUST00000057910
GeneID:66932 KEGG:mmu:66932 UCSC:uc007gdq.1 UCSC:uc007gds.1
InParanoid:Q7TT28 NextBio:323057 Bgee:Q7TT28 CleanEx:MM_REXO1
Genevestigator:Q7TT28 GermOnline:ENSMUSG00000047417 Uniprot:Q7TT28
Length = 1213
Score = 133 (51.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 139 AMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED-IKN 197
A+DCEM + L+L RV +VD D V++ T+V+P V +Y +G+TE D +
Sbjct: 1054 ALDCEM--SYTTYGLEL-TRVTVVDTDMQVVYDTFVKPDNEVVDYNTRFSGVTEADLVDT 1110
Query: 198 AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAK 257
++ L++V+ +L + + T +L+GH LE DL +L++ + + DT+
Sbjct: 1111 SITLRDVQAVLLSMFS--ADT-----------ILIGHSLESDLLALKVIHGTVV--DTSV 1155
Query: 258 YRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRL 300
P SL+ L YL IQ V H ED + M L
Sbjct: 1156 LFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHL 1200
Score = 44 (20.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/109 (26%), Positives = 45/109 (41%)
Query: 50 QKLSKSFESLREHLTGPLSKAHCSGIFS-DRGCNLCMNIFDSPSSLIKHKEACS---LSA 105
++ + E+ R H GP + A CS S D + + +P L+ A L+
Sbjct: 103 RRYQELLETARGHSAGPSALAPCSPATSIDDDDTFSLALTYTPGGLLSPDAAYQPTPLAV 162
Query: 106 PV-PFEK-TLSNAE-SQKKISGAIDEKRTCRGPKAVAMD--C-EMVGGG 148
P P K +L+ ++ SQ + +G PKAV C V GG
Sbjct: 163 PAEPGHKYSLAPSDRSQGRAAGGAGALEYV--PKAVGQPRRCGRPVSGG 209
>UNIPROTKB|F1N3K9 [details] [associations]
symbol:LOC100335177 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:DAAA02022135 EMBL:DAAA02022136
IPI:IPI00687563 Ensembl:ENSBTAT00000048722 OMA:FAVNCEV
Uniprot:F1N3K9
Length = 387
Score = 124 (48.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 52/170 (30%), Positives = 74/170 (43%)
Query: 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTE 192
R P AM CE L+ RV +VD V++ T+V+P V +Y +G+ E
Sbjct: 222 RNPCVFAMSCEACYTAKG--LEP-TRVTVVDPSLQVVYDTFVKPDEEVIDYNTRFSGVAE 278
Query: 193 EDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHML 252
+D+KN V+D + IL N L D +L+GH EH L +L++ + +
Sbjct: 279 DDLKNMKT--SVRD-VQAILLN------LFSAD---TILIGHSFEHSLYALKLIHTS--I 324
Query: 253 RDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQS--GVHDPYEDCVSVMRL 300
DT P SLK L YL IQ G H E+ + M L
Sbjct: 325 VDTTVLFPHPLGLPHRRSLKGLVADYLQRVIQDEVGGHSSSENATACMEL 374
>ZFIN|ZDB-GENE-030131-3113 [details] [associations]
symbol:pan2 "PAN2 poly(A) specific ribonuclease
subunit homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR017986 InterPro:IPR001394
InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR015943
PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-030131-3113 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 GO:GO:0006511
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004221 EMBL:BX927210
GeneTree:ENSGT00390000013978 IPI:IPI00899532
Ensembl:ENSDART00000111836 ArrayExpress:E7FG33 Bgee:E7FG33
Uniprot:E7FG33
Length = 1215
Score = 130 (50.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 38/147 (25%), Positives = 69/147 (46%)
Query: 164 EDENVIF-HTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLM 222
++E V F Y+ Q V +Y + +G+ D+ ++ K L L + R +
Sbjct: 1029 QNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLD-----AKISSKHLTTLKSTYLKLRFL 1083
Query: 223 LDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYD 282
+D G R VGHGL+ D + + P + DT + + ++S L++L +L +
Sbjct: 1084 IDTG-VRF-VGHGLQKDFRVINLMVPKDQVIDTVYLFHMPRKRMIS--LRFLAWYFLDLN 1139
Query: 283 IQSGVHDPYEDCVSVMRLYKRFRRQDH 309
IQ HD ED + ++LY+++ H
Sbjct: 1140 IQGETHDSIEDARTALQLYRKYLELSH 1166
>ZFIN|ZDB-GENE-090406-2 [details] [associations]
symbol:znf319 "zinc finger protein 319" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
ZFIN:ZDB-GENE-090406-2 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 GeneTree:ENSGT00600000084559 EMBL:CR381560
IPI:IPI00803736 ProteinModelPortal:F1R2T0
Ensembl:ENSDART00000090226 Bgee:F1R2T0 Uniprot:F1R2T0
Length = 584
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 44/131 (33%), Positives = 60/131 (45%)
Query: 16 KCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
KC C K F + HL H + HS +P KCAVC+K SF+ R HL + AH SG
Sbjct: 238 KCETCDKSFSQSSHLAHHQRT--HSSERPFKCAVCEK---SFKH-RSHLVRHMY-AH-SG 289
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRTCRG 134
+ CNLC F S L+ H+ C PF + + + K+ S +RT
Sbjct: 290 EHLFK-CNLCELHFKESSELLHHQ--CQPQGARPF-RCATCGKGFKRPSDLRQHERTHSE 345
Query: 135 PKAV-AMDCEM 144
+ DC+M
Sbjct: 346 ERPFHCEDCQM 356
>UNIPROTKB|E2QX02 [details] [associations]
symbol:REXO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 OMA:VAYDRSP EMBL:AAEX03012623
EMBL:AAEX03012624 Ensembl:ENSCAFT00000030942 Uniprot:E2QX02
Length = 1208
Score = 135 (52.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 50/169 (29%), Positives = 82/169 (48%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A+DCEM + L+L RV +VD D V++ T+V+P + +Y +G+TE D
Sbjct: 1045 PGIYALDCEM--SYTTYGLEL-TRVTVVDTDMQVVYDTFVKPDNEIVDYNTRFSGVTEAD 1101
Query: 195 IKN-AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLR 253
+ + ++ L++V+ +L + + T +L+GH LE DL +L++ + +
Sbjct: 1102 LADTSISLRDVQAVLLSMFS--ADT-----------VLIGHSLESDLLALKVIHSTVV-- 1146
Query: 254 DTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV--HDPYEDCVSVMRL 300
DT+ P SL+ L YL IQ V H ED + M L
Sbjct: 1147 DTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHL 1195
Score = 40 (19.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 77 SDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAID 127
SD +L ++ P +K AP P + S++ S + S ++D
Sbjct: 537 SDSDSSLGSSVAQGPRKRLKAPPPAQ-PAPTPAPASPSSSSSSSEASESVD 586
>UNIPROTKB|F1P3T2 [details] [associations]
symbol:ZNF319 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005634 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.160.60
OMA:AQHHSAH GeneTree:ENSGT00600000084559 EMBL:AADN02065748
IPI:IPI00585789 ProteinModelPortal:F1P3T2
Ensembl:ENSGALT00000001475 Uniprot:F1P3T2
Length = 510
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 42/132 (31%), Positives = 61/132 (46%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
+KC C K F + HL+ H + HS +P KC VC+K K R HL + AH S
Sbjct: 173 YKCTLCDKSFSQSSHLVHHKRT--HSSERPYKCTVCEKTFKH----RSHLVRHMY-AH-S 224
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRTCR 133
G + CN+C F S L++H C+ S PF + ++ K+ S +RT
Sbjct: 225 GEHLFK-CNVCELHFKESSELLQHP--CTPSGERPF-RCGECQKAFKRPSDLRQHERTHS 280
Query: 134 GPKAVAMD-CEM 144
+ D C+M
Sbjct: 281 EERPFKCDLCQM 292
>UNIPROTKB|E1BR93 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00915205
ProteinModelPortal:E1BR93 Ensembl:ENSGALT00000039112
ArrayExpress:E1BR93 Uniprot:E1BR93
Length = 755
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 51/181 (28%), Positives = 83/181 (45%)
Query: 127 DEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYE 186
D +RT P +DCEM + RV LVD + + + V+P+ + NY
Sbjct: 213 DLQRTDSSP-LFGLDCEMCLTARGNEV---VRVSLVDAEGQCLLNELVKPESVIVNYCTR 268
Query: 187 VTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMN 246
+G+T K +P VK ++ +I + +++ D +LVGH L DL +L+M
Sbjct: 269 YSGVTR---KMLLP---VKTRLPDIQTRLK---KILPHDA---VLVGHSLNADLQALQMI 316
Query: 247 YPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV---HDPYEDCVSVMRLYKR 303
+P + DT+ + LK+L + LG +IQ HDP ED + + L +
Sbjct: 317 HPSVI--DTSLL--FARNEGRRFKLKFLAKAVLGKEIQCEQRLGHDPAEDARAALELAQF 372
Query: 304 F 304
F
Sbjct: 373 F 373
>UNIPROTKB|F1P5D1 [details] [associations]
symbol:LOC427001 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006055
InterPro:IPR012337 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 SMART:SM00479 Pfam:PF00929 GO:GO:0005730
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00630000089807
EMBL:AADN02064630 EMBL:AADN02064631 EMBL:AADN02064632
EMBL:AADN02064633 EMBL:AADN02064634 IPI:IPI00601052
Ensembl:ENSGALT00000003504 ArrayExpress:F1P5D1 Uniprot:F1P5D1
Length = 773
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 51/181 (28%), Positives = 83/181 (45%)
Query: 127 DEKRTCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYE 186
D +RT P +DCEM + RV LVD + + + V+P+ + NY
Sbjct: 213 DLQRTDSSP-LFGLDCEMCLTARGNEV---VRVSLVDAEGQCLLNELVKPESVIVNYCTR 268
Query: 187 VTGLTEEDIKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMN 246
+G+T K +P VK ++ +I + +++ D +LVGH L DL +L+M
Sbjct: 269 YSGVTR---KMLLP---VKTRLPDIQTRLK---KILPHDA---VLVGHSLNADLQALQMI 316
Query: 247 YPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV---HDPYEDCVSVMRLYKR 303
+P + DT+ + LK+L + LG +IQ HDP ED + + L +
Sbjct: 317 HPSVI--DTSLL--FARNEGRRFKLKFLAKAVLGKEIQCEQRLGHDPAEDARAALELAQF 372
Query: 304 F 304
F
Sbjct: 373 F 373
>FB|FBgn0033352 [details] [associations]
symbol:CG8232 species:7227 "Drosophila melanogaster"
[GO:0004535 "poly(A)-specific ribonuclease activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001394 InterPro:IPR006055 InterPro:IPR012337
InterPro:IPR015943 PROSITE:PS50235 SMART:SM00479 Pfam:PF00929
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676
GO:GO:0005622 GO:GO:0006511 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0004221 GO:GO:0004535 GO:GO:0000289 KO:K12571
OMA:TQLHQDM GeneTree:ENSGT00390000013978 EMBL:BT031142
RefSeq:NP_610427.2 UniGene:Dm.11534 SMR:A1Z7K9 IntAct:A1Z7K9
STRING:A1Z7K9 EnsemblMetazoa:FBtr0088654 GeneID:35893
KEGG:dme:Dmel_CG8232 UCSC:CG8232-RA FlyBase:FBgn0033352
InParanoid:A1Z7K9 KO:K01072 OrthoDB:EOG4HT771 ChiTaRS:CG8232
GenomeRNAi:35893 NextBio:795685 Uniprot:A1Z7K9
Length = 1241
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 54/211 (25%), Positives = 90/211 (42%)
Query: 102 SLSAPVPFEKTLSNAESQKKISGAIDEKRTCRGPKAVAMDCEMVGGGSNGTLDLC----A 157
+LSA + S+ Q A+D + P+ + E+ G T+ C A
Sbjct: 1014 NLSADATLQPLQSDEMPQSGDLVAMDAEFVTLNPE----ENEIRPDGKTATIKPCHMSVA 1069
Query: 158 RV-CLVDED--ENVIF-HTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILN 213
R+ C+ + E V F Y+ Q V +Y + +G+ D+ K L L
Sbjct: 1070 RISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLD-----ANFSKKRLTALK 1124
Query: 214 NGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKY 273
+ ++D G + VGHGL++D + + P + DT + +VS L++
Sbjct: 1125 YSYQKLKYLVDVGV--IFVGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRMVS--LRF 1180
Query: 274 LTRTYLGYDIQSGVHDPYEDCVSVMRLYKRF 304
L +LG IQS HD ED + ++LYK +
Sbjct: 1181 LAWHFLGTKIQSETHDSIEDARTTLQLYKHY 1211
>ASPGD|ASPL0000070457 [details] [associations]
symbol:AN4357 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR006055 InterPro:IPR007087 InterPro:IPR012337
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00479 Pfam:PF00929 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BN001303 InterPro:IPR022755 Pfam:PF12171
EMBL:AACD01000075 RefSeq:XP_661961.1 ProteinModelPortal:Q5B523
EnsemblFungi:CADANIAT00006101 GeneID:2872156 KEGG:ani:AN4357.2
OrthoDB:EOG4B5SDQ Uniprot:Q5B523
Length = 560
Score = 119 (46.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 49/166 (29%), Positives = 80/166 (48%)
Query: 136 KAVAMDCEMVG--GGSNGTLDLCARVCLVDE-DENVIFHTYVQPQLP--VTNYRYEVTGL 190
+AV +DCEMVG G +N + R+ VD V+ +T+V+P V N+R V+G+
Sbjct: 367 QAVVLDCEMVGVVGPNNSEVSEVVRLAAVDFLSGEVLVNTFVEPAADQRVINWRTRVSGV 426
Query: 191 TEEDIKNAMPLKEVKDKILEILNNGESTGRLM-LDDGKARLLVGHGLEHDLDSLRMNYPD 249
N L E+K K + + E+ L+ + K +L+GH L +DL L M +
Sbjct: 427 ------NKSLLSEMK-KQGQTVQGWEAARDLLWMFVDKQTILIGHSLHNDLAVLGMVH-Q 478
Query: 250 HMLRDTAKYRPLMKTNLVSHS-LKYLTRTYLGYDIQSGV-HDPYED 293
++ R + + ++ L +T+ DIQ+G HD ED
Sbjct: 479 RIVDSAILTRDAVAGAKEDCARVRKLAKTFFELDIQTGKGHDCLED 524
Score = 46 (21.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/94 (24%), Positives = 37/94 (39%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISY-HSVHQP----KCAVCQKLSKSFESLRE-HLTGPLS 68
H C AC + F + L H + S H+ +P K +L S+ GP +
Sbjct: 11 HFCHACQRTFVDANALRMHRRSSKAHTTERPVSPTKPIPGTRLMPKVRSISPTDRNGPNT 70
Query: 69 KAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACS 102
++ S C LC F ++L H+ + S
Sbjct: 71 ESS-----SKPQCKLCNRAFKDENALSDHERSQS 99
>UNIPROTKB|F1P8U5 [details] [associations]
symbol:F1P8U5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00630000089807 EMBL:AAEX03007922 OMA:FAVNCEV
Ensembl:ENSCAFT00000002678 Uniprot:F1P8U5
Length = 369
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 50/167 (29%), Positives = 79/167 (47%)
Query: 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEED 194
P A++CE V + G L+L +V +VD V++ T+V+P V +Y ++G+ E+D
Sbjct: 207 PGVFAVNCE-VCYTAKG-LEL-TQVTVVDPSLQVVYDTFVKPDDEVIDYNTRLSGVVEDD 263
Query: 195 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRD 254
+KN ++D + IL N L D +L+GH EH L +L++ + + D
Sbjct: 264 LKNTKT--SIRD-VQAILLN------LFSAD---TVLIGHSFEHSLYALKLIHSSVV--D 309
Query: 255 TAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHD-PYEDCVSVMRL 300
T P SLK L YL IQ H+ E+ + M L
Sbjct: 310 TTILFPHRLGLPHKRSLKSLVADYLQRIIQDDDHNNSSENATACMEL 356
>UNIPROTKB|H0Y669 [details] [associations]
symbol:ZFP64 "Zinc finger protein 64 homolog, isoforms 1
and 2" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.160.60 EMBL:AL121771 HGNC:HGNC:15940
EMBL:AL109984 EMBL:AL121923 ProteinModelPortal:H0Y669
Ensembl:ENST00000456175 Uniprot:H0Y669
Length = 120
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHL 63
HKC C K F RKD+L HM+ + SV KC +C + SL++HL
Sbjct: 36 HKCEFCDKCFSRKDNLTMHMRC-HTSVKPHKCHLCDYAAVDSSSLKKHL 83
>UNIPROTKB|E1BUD7 [details] [associations]
symbol:LOC100859766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0034378 "chylomicron assembly" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 GO:GO:0005634
GO:GO:0006917 GO:GO:0043565 GO:GO:0008270 GO:GO:0001077
Gene3D:3.30.160.60 GeneTree:ENSGT00390000013640 OMA:EMESFLM
EMBL:AADN02019083 IPI:IPI00579620 Ensembl:ENSGALT00000010635
Uniprot:E1BUD7
Length = 405
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 30/91 (32%), Positives = 42/91 (46%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
H+C+ C K F RKDHL H++ + C C K + R HL A SG
Sbjct: 10 HQCMYCEKMFHRKDHLRNHLQTHDPNKEALHCPECGKNYNTKLGFRRHLA---MHAAASG 66
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACSLSA 105
D C +C+ F+S L++H +A S A
Sbjct: 67 ---DLSCKVCLQTFESTQVLLEHLKAHSRRA 94
>RGD|1307999 [details] [associations]
symbol:Plagl2 "pleiomorphic adenoma gene-like 2" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 RGD:1307999 GO:GO:0005634
GO:GO:0006917 GO:GO:0043565 GO:GO:0008270 GO:GO:0001077
Gene3D:3.30.160.60 OMA:EMESFLM IPI:IPI00768242
Ensembl:ENSRNOT00000013383 UCSC:RGD:1307999 ArrayExpress:D3ZX35
Uniprot:D3ZX35
Length = 495
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 29/88 (32%), Positives = 43/88 (48%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
H+C+ C K F RKDHL H++ + C+ C K + R HL A SG
Sbjct: 97 HQCMYCDKMFHRKDHLRNHLQTHDPNKEALHCSECGKNYNTKLGYRRHLA---MHAASSG 153
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACS 102
D C +C+ F+S +L++H +A S
Sbjct: 154 ---DLSCKVCLQTFESTQALLEHLKAHS 178
>UNIPROTKB|J9P787 [details] [associations]
symbol:PLAGL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
GeneTree:ENSGT00390000013640 CTD:5326 OMA:EMESFLM EMBL:AAEX03013881
RefSeq:XP_542953.2 Ensembl:ENSCAFT00000049428 GeneID:485829
KEGG:cfa:485829 Uniprot:J9P787
Length = 496
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 29/88 (32%), Positives = 43/88 (48%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
H+C+ C K F RKDHL H++ + C+ C K + R HL A SG
Sbjct: 98 HQCMYCDKMFHRKDHLRNHLQTHDPNKEALHCSECGKNYNTKLGYRRHLA---MHAASSG 154
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACS 102
D C +C+ F+S +L++H +A S
Sbjct: 155 ---DLSCKVCLQTFESTQALLEHLKAHS 179
>UNIPROTKB|Q9UPG8 [details] [associations]
symbol:PLAGL2 "Zinc finger protein PLAGL2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0006917 "induction of apoptosis" evidence=IBA]
[GO:0034378 "chylomicron assembly" evidence=IBA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005634 EMBL:CH471077 GO:GO:0006917 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0001077 eggNOG:COG5048
Gene3D:3.30.160.60 EMBL:AL121897 HOGENOM:HOG000294191
HOVERGEN:HBG053608 EMBL:AF006005 EMBL:D83784 EMBL:AK292450
EMBL:BC023655 IPI:IPI00010085 RefSeq:NP_002648.1 UniGene:Hs.154104
ProteinModelPortal:Q9UPG8 SMR:Q9UPG8 IntAct:Q9UPG8 STRING:Q9UPG8
PhosphoSite:Q9UPG8 DMDM:14548188 PRIDE:Q9UPG8 DNASU:5326
Ensembl:ENST00000246229 GeneID:5326 KEGG:hsa:5326 UCSC:uc002wxn.2
CTD:5326 GeneCards:GC20M030780 HGNC:HGNC:9047 HPA:HPA005900
MIM:604866 neXtProt:NX_Q9UPG8 PharmGKB:PA33380 InParanoid:Q9UPG8
OMA:EMESFLM OrthoDB:EOG4TF0K3 PhylomeDB:Q9UPG8 GenomeRNAi:5326
NextBio:20618 Bgee:Q9UPG8 CleanEx:HS_PLAGL2 Genevestigator:Q9UPG8
GermOnline:ENSG00000126003 Uniprot:Q9UPG8
Length = 496
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 29/88 (32%), Positives = 43/88 (48%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
H+C+ C K F RKDHL H++ + C+ C K + R HL A SG
Sbjct: 98 HQCMYCDKMFHRKDHLRNHLQTHDPNKEALHCSECGKNYNTKLGYRRHLA---MHAASSG 154
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACS 102
D C +C+ F+S +L++H +A S
Sbjct: 155 ---DLSCKVCLQTFESTQALLEHLKAHS 179
>UNIPROTKB|F1MFV9 [details] [associations]
symbol:PLAGL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0034378 "chylomicron assembly" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IEA] [GO:0006629 "lipid metabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005634 GO:GO:0006917 GO:GO:0043565 GO:GO:0008270
GO:GO:0001077 Gene3D:3.30.160.60 GeneTree:ENSGT00390000013640
OMA:EMESFLM EMBL:DAAA02036398 EMBL:DAAA02036399 IPI:IPI00692640
Ensembl:ENSBTAT00000024395 Uniprot:F1MFV9
Length = 506
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 29/88 (32%), Positives = 43/88 (48%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
H+C+ C K F RKDHL H++ + C+ C K + R HL A SG
Sbjct: 108 HQCMYCDKMFHRKDHLRNHLQTHDPNKEALHCSECGKNYNTKLGYRRHLA---MHAASSG 164
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACS 102
D C +C+ F+S +L++H +A S
Sbjct: 165 ---DLSCKVCLQTFESTQALLEHLKAHS 189
>UNIPROTKB|F1S523 [details] [associations]
symbol:LOC100624021 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
GeneTree:ENSGT00390000013640 OMA:EMESFLM EMBL:FP565500
EMBL:CU928633 Ensembl:ENSSSCT00000007924 Ensembl:ENSSSCT00000024708
Uniprot:F1S523
Length = 506
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 29/88 (32%), Positives = 43/88 (48%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
H+C+ C K F RKDHL H++ + C+ C K + R HL A SG
Sbjct: 108 HQCMYCDKMFHRKDHLRNHLQTHDPNKEALHCSECGKNYNTKLGYRRHLA---MHAASSG 164
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKEACS 102
D C +C+ F+S +L++H +A S
Sbjct: 165 ---DLSCKVCLQTFESTQALLEHLKAHS 189
>MGI|MGI:2442656 [details] [associations]
symbol:Zfp865 "zinc finger protein 865" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
MGI:MGI:2442656 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 eggNOG:COG5048
Gene3D:3.30.160.60 EMBL:AC157563 EMBL:AK154737 IPI:IPI00350745
RefSeq:NP_001028555.1 UniGene:Mm.86607 ProteinModelPortal:Q3U3I9
SMR:Q3U3I9 PRIDE:Q3U3I9 Ensembl:ENSMUST00000076251 GeneID:319748
KEGG:mmu:319748 UCSC:uc009ezk.1 CTD:319748
GeneTree:ENSGT00530000064557 HOGENOM:HOG000133000
HOVERGEN:HBG085076 InParanoid:Q3U3I9 OMA:PPQYDYP NextBio:395328
Bgee:Q3U3I9 Genevestigator:Q3U3I9 Uniprot:Q3U3I9
Length = 1058
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 17 CVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGI 75
C C+K FK+ HL +H I H+ +P C+VC K ESL+ H+ K H + +
Sbjct: 352 CSLCWKVFKKPSHLHQHQII--HTGEKPFSCSVCSKSFNRRESLKRHV-----KTHSADL 404
Query: 76 FSDRGCNLCMNIFDSPSSLIKHKEA-CSLSAPVP 108
C +C +F S L+KH+ A + P P
Sbjct: 405 LR-LPCGICGKVFRDASYLLKHQAAHAAAGTPRP 437
>FB|FBgn0020309 [details] [associations]
symbol:crol "crooked legs" species:7227 "Drosophila
melanogaster" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS;IMP] [GO:0007155 "cell
adhesion" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IGI;IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IMP] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=IGI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031935 "regulation of chromatin
silencing" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005634 GO:GO:0045892 EMBL:AE014134 GO:GO:0045931
GO:GO:0008270 GO:GO:0007155 GO:GO:0006357 GO:GO:0003676
eggNOG:COG5048 Gene3D:3.30.160.60 GO:GO:0046331 GO:GO:0007476
GO:GO:0030178 HSSP:P08047 GO:GO:0031935
GeneTree:ENSGT00700000104018 EMBL:AF020347 RefSeq:NP_001245993.1
RefSeq:NP_477243.1 UniGene:Dm.3562 SMR:O61360 STRING:O61360
EnsemblMetazoa:FBtr0080261 EnsemblMetazoa:FBtr0305262 GeneID:34592
KEGG:dme:Dmel_CG14938 UCSC:CG14938-RA CTD:34592 FlyBase:FBgn0020309
InParanoid:O61360 OMA:SPHRCSY ChiTaRS:crol GenomeRNAi:34592
NextBio:789202 Uniprot:O61360
Length = 962
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 32/88 (36%), Positives = 44/88 (50%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
HKC C K F RK+HL HM+ HS P C C +K F + +EHL +S+ H +G
Sbjct: 585 HKCEYCQKTFTRKEHLNNHMR--QHSSDNPHC--CNVCNKPF-TRKEHLINHMSRCH-TG 638
Query: 75 IFSDRG--CNLCMNIFDSPSSLIKHKEA 100
DR C C F +L+ H+ +
Sbjct: 639 ---DRPFTCETCGKSFPLKGNLLFHQRS 663
>UNIPROTKB|I3L8R6 [details] [associations]
symbol:IKZF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] Pfam:PF00096
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355 GO:GO:0045892
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
GeneTree:ENSGT00550000074392 OMA:PTSCISE Ensembl:ENSSSCT00000030428
Uniprot:I3L8R6
Length = 551
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 5 AELPKRSTARHK---CVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLR 60
A +P T+R + C C F +K +L+ H+K+ HS +P KC C + ++L
Sbjct: 180 ALVPATHTSRERPFHCNQCGASFTQKGNLLRHIKL--HSGEKPFKCPFCNYACRRRDALT 237
Query: 61 EHL-TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQ 119
HL T +S + CN C + S+L +HKE C + ++LS E+Q
Sbjct: 238 GHLRTHSVSSPTVGKPYK---CNYCGRSYKQQSTLEEHKERCH-----NYLQSLST-EAQ 288
Query: 120 KKISGAIDEKR 130
K +G DE R
Sbjct: 289 AKAAGPRDEIR 299
>SGD|S000004097 [details] [associations]
symbol:REX3 "RNA exonuclease" species:4932 "Saccharomyces
cerevisiae" [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP] [GO:0043628 "ncRNA
3'-end processing" evidence=IMP] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0034476 "U5 snRNA 3'-end processing"
evidence=IGI] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
SGD:S000004097 Pfam:PF00929 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 EMBL:BK006945 eggNOG:COG0847 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:X89514 EMBL:U53878 EMBL:U53876 GO:GO:0000175
GO:GO:0000467 GO:GO:0034476 OrthoDB:EOG48KVM8 EMBL:Z73279
EMBL:Z73280 PIR:S64944 RefSeq:NP_013208.1 ProteinModelPortal:Q12090
SMR:Q12090 STRING:Q12090 EnsemblFungi:YLR107W GeneID:850797
KEGG:sce:YLR107W CYGD:YLR107w HOGENOM:HOG000154095 OMA:DCEMAFT
NextBio:967014 Genevestigator:Q12090 GermOnline:YLR107W
Uniprot:Q12090
Length = 404
Score = 115 (45.5 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 48/167 (28%), Positives = 76/167 (45%)
Query: 138 VAMDCEMVGGGSNGTLDLCARVCLVDE-DENVIFHTYVQPQLPVTNYRYEVTGLTEEDIK 196
+++DCEM + R+ +VD +F +QP + + + +G+ E D
Sbjct: 244 LSLDCEMAFTSLGYEM---IRLTIVDFFTGKTLFDHVIQPIGDIVDLNSDFSGVHEIDRT 300
Query: 197 NAMPLKEVKDKIL-EILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDT 255
N KE D L E L N S +L+GHGLE+DL+ +R+ + + + DT
Sbjct: 301 NCPTYKEALDVFLSENLINKNS------------ILIGHGLENDLNVMRLFH--NKVIDT 346
Query: 256 AKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYK 302
A K + SLK L L IQ+G HD +D ++ M + K
Sbjct: 347 AILYSRTKFKV---SLKNLAFEVLSRKIQNGEHDSSQDAIATMDVVK 390
Score = 42 (19.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 17 CVACYKQFKRKDHLIEHMKISYH 39
C+ C FK+ D ++E YH
Sbjct: 156 CLRCSSNFKKTD-IMEKTLCRYH 177
>UNIPROTKB|I3L2Z5 [details] [associations]
symbol:MAZ "Myc-associated zinc finger protein"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00096 InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.160.60 EMBL:AC009133 HGNC:HGNC:6914
Ensembl:ENST00000567444 Bgee:I3L2Z5 Uniprot:I3L2Z5
Length = 202
Score = 110 (43.8 bits), Expect = 0.00052, P = 0.00051
Identities = 32/105 (30%), Positives = 46/105 (43%)
Query: 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPL 67
KR H C C K F+ HL H K+S HS +P +C VCQ+ K + + H+
Sbjct: 23 KRIRKNHACEMCGKAFRDVYHLNRH-KLS-HSDEKPYQCPVCQQRFKRKDRMSYHV---- 76
Query: 68 SKAHCSGIFSDRGCNLCMNIFDSPSSLIKH-KEACSLSAPVPFEK 111
++H + C+ C F P L H ++ S P EK
Sbjct: 77 -RSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEK 120
>UNIPROTKB|F1RFY7 [details] [associations]
symbol:ZFP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
CTD:124961 OMA:CNECART GeneTree:ENSGT00700000104337 EMBL:FP015831
RefSeq:XP_003358280.1 Ensembl:ENSSSCT00000030882 GeneID:100626730
KEGG:ssc:100626730 Uniprot:F1RFY7
Length = 503
Score = 117 (46.2 bits), Expect = 0.00059, P = 0.00059
Identities = 42/133 (31%), Positives = 54/133 (40%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
H C C K F + HLI+HM++ HS +P +C C K + SLR HL + H
Sbjct: 142 HSCKECGKAFNQNSHLIQHMRV--HSGEKPFECKECGKTFGTNSSLRRHL-----RIHAG 194
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRTCR 133
CN C F S LI H + P E+ A SQ S I +R
Sbjct: 195 E--KPFACNECGKAFIQSSHLIHHHRIHTGERPYKCEEC-GKAFSQN--SALILHQRIHT 249
Query: 134 GPKAVAMDCEMVG 146
G K +C G
Sbjct: 250 GEKPY--ECNECG 260
>UNIPROTKB|E1BKG6 [details] [associations]
symbol:FIZ1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] Pfam:PF00096 InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0005634 GO:GO:0005737
GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.160.60
GeneTree:ENSGT00490000043512 EMBL:DAAA02047734 EMBL:DAAA02047735
IPI:IPI00906709 Ensembl:ENSBTAT00000055556 Uniprot:E1BKG6
Length = 529
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 29/93 (31%), Positives = 41/93 (44%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
H C C K F+R HL H++ H P +CA C + LR HL ++ H
Sbjct: 257 HACPLCPKAFRRPAHLSRHLR--GHGPQPPLRCAACPRTFPEPAQLRRHL----AQEHAG 310
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAP 106
G C++C+ F P SL +H+ S P
Sbjct: 311 G--GGHQCSICLKAFARPWSLSRHRLVHSTDRP 341
>UNIPROTKB|J9P3M8 [details] [associations]
symbol:ZNF547 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001909
Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF01352 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS50805 SMART:SM00349 SMART:SM00355 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 SUPFAM:SSF109640 GeneTree:ENSGT00700000104418
EMBL:AAEX03000701 RefSeq:XP_003432677.2 Ensembl:ENSCAFT00000048378
GeneID:100685704 KEGG:cfa:100685704 OMA:HKLVEHQ Uniprot:J9P3M8
Length = 529
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 35/98 (35%), Positives = 46/98 (46%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
++C C K F RKD ++EH KI H+ +P KCA C K L EH K H +
Sbjct: 365 YECRECGKAFSRKDKVVEHQKI--HTGERPYKCAECGKAFSRKHKLVEH-----QKIH-T 416
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111
G+ + C C F SSLI H+ S P +K
Sbjct: 417 GVRAYE-CRECGKFFMDGSSLIIHQRVHSGERPYECDK 453
>UNIPROTKB|P17021 [details] [associations]
symbol:ZNF17 "Zinc finger protein 17" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Reactome:REACT_71 InterPro:IPR001909 Pfam:PF00096
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF01352 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS50805
SMART:SM00349 SMART:SM00355 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
eggNOG:COG5048 Gene3D:3.30.160.60 HOVERGEN:HBG018163
HOGENOM:HOG000234617 KO:K09228 SUPFAM:SSF109640 EMBL:AC003002
EMBL:AK097123 EMBL:AK098183 EMBL:AK127948 EMBL:AK128471
EMBL:AB075827 EMBL:X52341 IPI:IPI00413807 IPI:IPI00647959
IPI:IPI00923508 PIR:I37949 RefSeq:NP_008890.2 UniGene:Hs.729403
ProteinModelPortal:P17021 SMR:P17021 IntAct:P17021 STRING:P17021
PhosphoSite:P17021 DMDM:229485310 PRIDE:P17021 DNASU:7565
Ensembl:ENST00000307658 GeneID:7565 KEGG:hsa:7565 UCSC:uc002qoo.1
UCSC:uc002qop.1 CTD:7565 GeneCards:GC19P057922 HGNC:HGNC:12958
neXtProt:NX_P17021 PharmGKB:PA37540 InParanoid:P17021 OMA:RIHTRPR
OrthoDB:EOG4ZCT3X GenomeRNAi:7565 NextBio:29587 Bgee:P17021
CleanEx:HS_ZNF17 Genevestigator:P17021 Uniprot:P17021
Length = 662
Score = 118 (46.6 bits), Expect = 0.00067, P = 0.00067
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSG 74
++C C K F RK HL++H +I H+ +P+ VC + K+F + + HL G K H
Sbjct: 274 YECSECGKAFLRKSHLLQHQRI--HT--RPRPYVCSECGKAFLT-QAHLVGH-QKIHTGE 327
Query: 75 IFSDRGCNLCMNIFDSPSSLIKHKE 99
GCN C F S+LI+H++
Sbjct: 328 --RPYGCNECGKYFMYSSALIRHQK 350
>UNIPROTKB|F1RWD7 [details] [associations]
symbol:LOC100511574 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
GeneTree:ENSGT00700000104636 EMBL:FP016163
Ensembl:ENSSSCT00000009689 OMA:TRHLSSH Uniprot:F1RWD7
Length = 592
Score = 117 (46.2 bits), Expect = 0.00074, P = 0.00074
Identities = 30/84 (35%), Positives = 40/84 (47%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
++C C K FKR HL +H+ S H+ +P KC C K SL +HL+ +H
Sbjct: 308 YRCTECGKAFKRNSHLTQHL--SSHTGEKPHKCTECGKAFNWHSSLTQHLS-----SHTG 360
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKH 97
C C F SPSSL +H
Sbjct: 361 E--KPYECKECGKAFHSPSSLTRH 382
>UNIPROTKB|Q96NJ6 [details] [associations]
symbol:ZFP3 "Zinc finger protein 3 homolog" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 GO:GO:0005634 EMBL:CH471108
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 eggNOG:COG5048 Gene3D:3.30.160.60 HOVERGEN:HBG018163
HOGENOM:HOG000234617 EMBL:AK055288 EMBL:BC142962 IPI:IPI00064885
RefSeq:NP_694563.1 UniGene:Hs.48832 ProteinModelPortal:Q96NJ6
SMR:Q96NJ6 STRING:Q96NJ6 PhosphoSite:Q96NJ6 DMDM:74761006
PRIDE:Q96NJ6 Ensembl:ENST00000318833 GeneID:124961 KEGG:hsa:124961
UCSC:uc002gaq.3 CTD:124961 GeneCards:GC17P004981 HGNC:HGNC:12861
HPA:HPA053085 MIM:194480 neXtProt:NX_Q96NJ6 PharmGKB:PA37450
InParanoid:Q96NJ6 OMA:CNECART OrthoDB:EOG476JZZ PhylomeDB:Q96NJ6
ChiTaRS:ZFP3 GenomeRNAi:124961 NextBio:81445 Bgee:Q96NJ6
CleanEx:HS_ZFP3 Genevestigator:Q96NJ6 GermOnline:ENSG00000180787
Uniprot:Q96NJ6
Length = 502
Score = 116 (45.9 bits), Expect = 0.00076, P = 0.00076
Identities = 42/133 (31%), Positives = 54/133 (40%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
H C C K F + HLI+HM++ HS +P +C C K + SLR HL + H
Sbjct: 141 HTCKECGKAFNQNSHLIQHMRV--HSGEKPFECKECGKTFGTNSSLRRHL-----RIHAG 193
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRTCR 133
CN C F S LI H + P E+ A SQ S I +R
Sbjct: 194 E--KPFACNECGKAFIQSSHLIHHHRIHTGERPYKCEEC-GKAFSQN--SALILHQRIHT 248
Query: 134 GPKAVAMDCEMVG 146
G K +C G
Sbjct: 249 GEKPY--ECNECG 259
>UNIPROTKB|A5PJK9 [details] [associations]
symbol:ZFP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 eggNOG:COG5048
Gene3D:3.30.160.60 HOVERGEN:HBG018163 HOGENOM:HOG000234617
CTD:124961 OMA:CNECART OrthoDB:EOG476JZZ
GeneTree:ENSGT00700000104337 EMBL:DAAA02048741 EMBL:BC142153
IPI:IPI00709680 RefSeq:NP_001092559.1 UniGene:Bt.91235 SMR:A5PJK9
Ensembl:ENSBTAT00000004817 GeneID:538648 KEGG:bta:538648
InParanoid:A5PJK9 NextBio:20877492 Uniprot:A5PJK9
Length = 507
Score = 116 (45.9 bits), Expect = 0.00077, P = 0.00077
Identities = 42/133 (31%), Positives = 54/133 (40%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
H C C K F + HLI+HM++ HS +P +C C K + SLR HL + H
Sbjct: 146 HTCKECGKAFNQNSHLIQHMRV--HSGEKPFECKECGKTFGTNSSLRRHL-----RIHAG 198
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAIDEKRTCR 133
CN C F S LI H + P E+ A SQ S I +R
Sbjct: 199 E--KPFACNECGKAFIQSSHLIHHHRIHTGERPYKCEEC-GKAFSQN--SALILHQRIHT 253
Query: 134 GPKAVAMDCEMVG 146
G K +C G
Sbjct: 254 GEKPY--ECNECG 264
>UNIPROTKB|F1MRQ1 [details] [associations]
symbol:F1MRQ1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
EMBL:DAAA02036789 EMBL:DAAA02036790 EMBL:DAAA02036791
EMBL:DAAA02036792 EMBL:DAAA02036793 IPI:IPI00718028
ProteinModelPortal:F1MRQ1 Ensembl:ENSBTAT00000012763
GeneTree:ENSGT00470000042339 OMA:GIKYPCN Uniprot:F1MRQ1
Length = 560
Score = 116 (45.9 bits), Expect = 0.00088, P = 0.00088
Identities = 36/112 (32%), Positives = 52/112 (46%)
Query: 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHC 72
R+KC ACYK F LI+H H+ +P +C C K +++ H + H
Sbjct: 85 RYKCDACYKAFNFYSLLIQHR---VHTGEKPFQCDRCGKAFSQKSTMQRH-----KETHT 136
Query: 73 SGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPF---EKTLSNAESQKK 121
G + C+ C +IFDS S L++H+ S P EKT S E K+
Sbjct: 137 LGQSFE--CSRCEDIFDSHSKLMRHQRTHSGEKPFKCDVCEKTFSQEEVLKR 186
>UNIPROTKB|H9L030 [details] [associations]
symbol:H9L030 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
GeneTree:ENSGT00700000104821 EMBL:AADN02065153
ProteinModelPortal:H9L030 Ensembl:ENSGALT00000021838 OMA:LITHFRI
Uniprot:H9L030
Length = 207
Score = 108 (43.1 bits), Expect = 0.00098, P = 0.00098
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 15 HKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCS 73
+KC C K F++ HL+ H +I H+ +P KC +C K KS L+ H + H +
Sbjct: 10 YKCPVCEKSFRQCSHLMIHQRI--HTGDRPYKCPICGKGYKSSSHLKSH-----QRIH-T 61
Query: 74 GIFSDRGCNLCMNIFDSPSSLIKHK 98
G + C +C F S S+LI+H+
Sbjct: 62 GERPFK-CPVCGKSFKSSSNLIRHQ 85
>ZFIN|ZDB-GENE-060503-905 [details] [associations]
symbol:si:dkey-20i20.10 "si:dkey-20i20.10"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 SMART:SM00355 ZFIN:ZDB-GENE-060503-905
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
GeneTree:ENSGT00700000104669 EMBL:BX324210 IPI:IPI00866554
ProteinModelPortal:F1QSZ4 Ensembl:ENSDART00000141836 Uniprot:F1QSZ4
Length = 208
Score = 108 (43.1 bits), Expect = 0.0010, P = 0.0010
Identities = 32/87 (36%), Positives = 43/87 (49%)
Query: 2 DTEAELPKRSTARHK--CVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFES 58
+TE + ++ TA + C C K F RK L EHM+I H+ +P KC C +
Sbjct: 44 ETEQSISEKGTALNSLTCTQCGKTFTRKSGLDEHMRI--HTGEKPFKCPHCDWRFSISRN 101
Query: 59 LREHL---TG--PLSKAHCSGIFSDRG 80
LR H+ TG P +HCS FS G
Sbjct: 102 LRSHIKLHTGEKPHQCSHCSKRFSHPG 128
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 353 353 0.00079 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 121
No. of states in DFA: 612 (65 KB)
Total size of DFA: 251 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 34.49u 0.17s 34.66t Elapsed: 00:00:02
Total cpu time: 34.51u 0.17s 34.68t Elapsed: 00:00:03
Start: Thu May 9 13:43:18 2013 End: Thu May 9 13:43:21 2013
WARNINGS ISSUED: 1