Query 018586
Match_columns 353
No_of_seqs 255 out of 2491
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 17:35:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wlj_A Interferon stimulated g 100.0 1.8E-32 6.3E-37 235.9 14.9 163 133-310 3-171 (189)
2 2p1j_A POLIII, DNA polymerase 100.0 3.5E-29 1.2E-33 214.8 10.4 160 131-310 8-178 (186)
3 2gui_A DNA polymerase III epsi 100.0 7.9E-29 2.7E-33 214.1 11.6 158 134-310 8-187 (194)
4 1w0h_A 3'-5' exonuclease ERI1; 99.9 4.2E-28 1.4E-32 211.2 9.7 168 134-310 9-197 (204)
5 3mxm_B Three prime repair exon 99.9 2.2E-27 7.6E-32 211.6 8.8 161 134-310 11-217 (242)
6 3cg7_A CRN-4, cell death-relat 99.9 2.3E-27 8E-32 218.5 6.9 196 134-345 18-260 (308)
7 1zbh_A 3'-5' exonuclease ERI1; 99.9 9.1E-27 3.1E-31 214.1 10.5 168 133-309 76-264 (299)
8 2xri_A ERI1 exoribonuclease 3; 99.9 7.7E-27 2.6E-31 206.0 9.0 157 135-310 31-216 (224)
9 3u3y_B Three prime repair exon 99.9 2.5E-26 8.4E-31 209.8 10.9 165 134-310 11-217 (314)
10 1y97_A Three prime repair exon 99.9 7.9E-26 2.7E-30 201.5 11.8 166 133-310 8-212 (238)
11 1zbu_A ERI-1 homolog, 3'-5' ex 99.9 2.1E-26 7E-31 215.0 8.3 168 133-309 126-314 (349)
12 2f96_A Ribonuclease T; RNAse, 99.9 2.9E-26 9.8E-31 202.5 8.7 172 132-313 26-218 (224)
13 2igi_A Oligoribonuclease; RNAs 99.9 1.9E-25 6.3E-30 190.6 6.8 153 134-308 4-177 (180)
14 3v9w_A Ribonuclease T; DEDD nu 99.9 2.9E-24 9.8E-29 191.0 10.1 169 132-310 34-223 (235)
15 3tr8_A Oligoribonuclease; tran 99.9 8.4E-25 2.9E-29 186.3 5.4 156 131-308 5-181 (186)
16 2gbz_A Oligoribonuclease; ORN, 99.9 3.5E-24 1.2E-28 184.8 8.1 148 133-310 7-183 (194)
17 2qxf_A Exodeoxyribonuclease I; 99.9 3.3E-23 1.1E-27 200.5 10.4 162 134-313 8-206 (482)
18 2i13_A AART; DNA binding, zinc 99.7 4.8E-18 1.6E-22 145.5 4.8 119 6-126 13-153 (190)
19 2lt7_A Transcriptional regulat 99.7 7.2E-18 2.4E-22 136.2 4.0 96 4-111 12-111 (133)
20 2i13_A AART; DNA binding, zinc 99.7 1E-17 3.4E-22 143.5 3.7 119 6-126 41-181 (190)
21 2dlq_A GLI-kruppel family memb 99.6 4.3E-16 1.5E-20 123.4 6.7 106 9-126 2-114 (124)
22 2ee8_A Protein ODD-skipped-rel 99.6 6.3E-15 2.1E-19 113.6 9.4 93 6-110 9-105 (106)
23 1tf6_A Protein (transcription 99.6 1.8E-15 6.1E-20 129.4 6.3 117 9-127 7-157 (190)
24 1wjp_A Zinc finger protein 295 99.6 2.8E-15 9.5E-20 116.0 6.7 95 3-111 5-103 (107)
25 2jp9_A Wilms tumor 1; DNA bind 99.6 1.2E-15 4.2E-20 120.0 4.5 104 9-124 1-114 (119)
26 2dmd_A Zinc finger protein 64, 99.5 1.1E-14 3.6E-19 110.1 6.6 87 8-106 2-92 (96)
27 2rpc_A Zinc finger protein ZIC 99.5 7.6E-15 2.6E-19 121.1 6.1 100 9-109 20-153 (155)
28 1ubd_C Protein (YY1 zinc finge 99.5 8.2E-15 2.8E-19 116.2 5.9 102 11-125 2-113 (124)
29 2gli_A Protein (five-finger GL 99.5 2E-14 6.7E-19 118.5 6.9 114 12-125 1-149 (155)
30 1tf6_A Protein (transcription 99.5 7.6E-15 2.6E-19 125.4 4.1 114 7-125 35-183 (190)
31 2dmi_A Teashirt homolog 3; zin 99.5 6.5E-14 2.2E-18 109.6 8.1 95 6-110 11-112 (115)
32 1a1h_A QGSR zinc finger peptid 99.5 1.9E-14 6.4E-19 107.3 4.1 84 11-106 1-90 (90)
33 2csh_A Zinc finger protein 297 99.4 8.5E-14 2.9E-18 108.0 6.2 85 6-103 2-90 (110)
34 2yt9_A Zinc finger-containing 99.4 1.7E-13 5.7E-18 103.2 7.5 84 9-104 2-92 (95)
35 2kmk_A Zinc finger protein GFI 99.4 9.7E-14 3.3E-18 101.4 4.5 78 14-103 1-82 (82)
36 2gli_A Protein (five-finger GL 99.4 6.1E-13 2.1E-17 109.5 6.2 94 8-103 28-155 (155)
37 2ebt_A Krueppel-like factor 5; 99.3 4.6E-12 1.6E-16 96.1 7.8 85 7-103 8-100 (100)
38 2dlq_A GLI-kruppel family memb 99.3 2.7E-12 9.2E-17 101.3 5.5 88 7-104 28-121 (124)
39 2jp9_A Wilms tumor 1; DNA bind 99.3 1.6E-12 5.4E-17 101.9 3.1 83 7-101 29-119 (119)
40 2cot_A Zinc finger protein 435 99.3 4.7E-12 1.6E-16 91.5 5.3 69 5-109 9-77 (77)
41 4gzn_C ZFP-57, zinc finger pro 99.2 3.1E-12 1.1E-16 87.8 3.4 58 12-105 2-59 (60)
42 2wbs_A Krueppel-like factor 4; 99.2 5E-12 1.7E-16 93.7 4.5 80 11-102 2-89 (89)
43 1llm_C Chimera of ZIF23-GCN4; 99.2 1E-12 3.4E-17 97.7 -0.2 81 12-102 1-82 (88)
44 2lce_A B-cell lymphoma 6 prote 99.2 2.3E-11 7.8E-16 87.1 5.5 66 6-107 9-74 (74)
45 2ghf_A ZHX1, zinc fingers and 99.2 1.5E-11 5.1E-16 94.0 4.1 71 9-112 13-85 (102)
46 2dlk_A Novel protein; ZF-C2H2 99.1 5.6E-11 1.9E-15 86.0 5.9 72 9-115 2-77 (79)
47 2j7j_A Transcription factor II 99.1 3.5E-11 1.2E-15 88.1 4.3 74 14-102 1-85 (85)
48 2lt7_A Transcriptional regulat 99.1 5.3E-12 1.8E-16 101.5 -0.6 82 33-126 13-98 (133)
49 4gzn_C ZFP-57, zinc finger pro 99.1 1.9E-11 6.6E-16 83.8 2.1 47 80-126 6-52 (60)
50 1x6h_A Transcriptional repress 99.1 1.8E-10 6.2E-15 84.6 6.9 80 4-115 5-84 (86)
51 1x6e_A Zinc finger protein 24; 99.0 2.1E-10 7.3E-15 81.5 5.1 66 4-105 4-69 (72)
52 1x6h_A Transcriptional repress 99.0 8.4E-11 2.9E-15 86.4 2.7 47 80-126 17-67 (86)
53 1x5w_A Zinc finger protein 64, 99.0 3.1E-10 1.1E-14 80.1 5.3 66 8-109 3-68 (70)
54 2drp_A Protein (tramtrack DNA- 99.0 2.1E-10 7.2E-15 79.9 3.1 38 6-44 2-40 (66)
55 2ej4_A Zinc finger protein ZIC 99.0 9.1E-10 3.1E-14 82.5 6.6 70 13-110 24-94 (95)
56 2lv2_A Insulinoma-associated p 99.0 6E-10 2.1E-14 82.0 5.4 56 6-63 20-76 (85)
57 2gqj_A Zinc finger protein KIA 98.9 1.2E-10 4.2E-15 88.2 1.1 70 28-109 10-85 (98)
58 2dmi_A Teashirt homolog 3; zin 98.9 2.4E-11 8E-16 94.8 -3.5 92 27-126 4-100 (115)
59 2ct1_A Transcriptional repress 98.9 1E-09 3.6E-14 78.9 5.6 64 4-103 5-70 (77)
60 1ubd_C Protein (YY1 zinc finge 98.9 4.4E-10 1.5E-14 88.5 3.7 74 43-126 4-84 (124)
61 2dmd_A Zinc finger protein 64, 98.9 1.3E-09 4.4E-14 81.7 5.7 78 39-126 3-84 (96)
62 2d9h_A Zinc finger protein 692 98.9 5.2E-10 1.8E-14 80.7 3.1 69 8-109 1-70 (78)
63 2rpc_A Zinc finger protein ZIC 98.9 1.5E-09 5E-14 89.1 5.4 86 41-126 22-142 (155)
64 2ctd_A Zinc finger protein 512 98.9 1.3E-09 4.6E-14 82.2 4.4 75 22-108 14-93 (96)
65 3uk3_C Zinc finger protein 217 98.9 7.7E-10 2.6E-14 74.5 2.6 50 11-62 1-51 (57)
66 2csh_A Zinc finger protein 297 98.9 8.7E-10 3E-14 85.0 2.9 77 39-126 5-85 (110)
67 1f2i_G Fusion of N-terminal 17 98.9 1.9E-09 6.6E-14 76.5 4.4 61 1-63 6-69 (73)
68 2eps_A POZ-, at HOOK-, and zin 98.8 3.1E-09 1.1E-13 70.9 5.1 49 5-55 3-53 (54)
69 2ctu_A Zinc finger protein 483 98.8 1.1E-11 3.7E-16 88.2 -7.7 68 29-112 5-73 (73)
70 2wbt_A B-129; zinc finger; 2.7 98.8 5.6E-10 1.9E-14 88.7 0.9 80 12-104 39-126 (129)
71 2yt9_A Zinc finger-containing 98.8 2.2E-09 7.6E-14 80.3 4.0 77 40-126 3-85 (95)
72 1x5w_A Zinc finger protein 64, 98.8 2.7E-09 9.2E-14 75.2 4.1 47 80-126 11-57 (70)
73 2dlk_A Novel protein; ZF-C2H2 98.8 3.5E-09 1.2E-13 76.3 4.8 47 80-126 11-60 (79)
74 2eml_A Zinc finger protein 28 98.8 4.5E-09 1.5E-13 67.4 4.8 45 3-49 1-46 (46)
75 2ysp_A Zinc finger protein 224 98.8 4.5E-09 1.5E-13 67.5 4.7 45 3-49 1-46 (46)
76 2elz_A Zinc finger protein 224 98.8 3.8E-09 1.3E-13 67.8 4.4 45 3-49 1-46 (46)
77 2ely_A Zinc finger protein 224 98.8 3.5E-09 1.2E-13 68.0 4.1 45 3-49 1-46 (46)
78 2em9_A Zinc finger protein 224 98.8 5.2E-09 1.8E-13 67.1 4.8 45 3-49 1-46 (46)
79 2ene_A Zinc finger protein 347 98.8 5.1E-09 1.7E-13 67.2 4.7 44 4-49 2-46 (46)
80 2en6_A Zinc finger protein 268 98.8 4.6E-09 1.6E-13 67.4 4.4 45 3-49 1-46 (46)
81 2enc_A Zinc finger protein 224 98.8 6.2E-09 2.1E-13 66.8 5.0 44 4-49 2-46 (46)
82 2em7_A Zinc finger protein 224 98.8 5E-09 1.7E-13 67.2 4.6 45 3-49 1-46 (46)
83 2emy_A Zinc finger protein 268 98.8 4.6E-09 1.6E-13 67.4 4.4 45 3-49 1-46 (46)
84 2emk_A Zinc finger protein 28 98.8 4.4E-09 1.5E-13 67.5 4.2 45 3-49 1-46 (46)
85 2ytq_A Zinc finger protein 268 98.8 4.9E-09 1.7E-13 67.3 4.4 45 3-49 1-46 (46)
86 2ee8_A Protein ODD-skipped-rel 98.8 3.8E-09 1.3E-13 80.7 4.6 77 40-126 13-93 (106)
87 2el4_A Zinc finger protein 268 98.8 6.6E-09 2.3E-13 66.6 4.9 44 4-49 2-46 (46)
88 4hec_A Putative uncharacterize 98.8 3.5E-08 1.2E-12 83.1 10.6 154 133-307 20-181 (190)
89 2ema_A Zinc finger protein 347 98.8 5.6E-09 1.9E-13 67.0 4.4 45 3-49 1-46 (46)
90 2ytn_A Zinc finger protein 347 98.8 6.7E-09 2.3E-13 66.6 4.7 44 4-49 2-46 (46)
91 2eov_A Zinc finger protein 484 98.8 5.5E-09 1.9E-13 67.0 4.3 45 3-49 1-46 (46)
92 2eoe_A Zinc finger protein 347 98.8 6.6E-09 2.3E-13 66.6 4.7 44 4-49 2-46 (46)
93 2ytr_A Zinc finger protein 347 98.8 5.3E-09 1.8E-13 67.1 4.1 45 3-49 1-46 (46)
94 2ytj_A Zinc finger protein 484 98.8 7.9E-09 2.7E-13 66.3 4.9 44 4-49 2-46 (46)
95 2yso_A ZFP-95, zinc finger pro 98.8 6E-09 2E-13 66.9 4.3 45 3-49 1-46 (46)
96 2kfn_A Klenow fragment of DNA 98.8 3.2E-08 1.1E-12 99.0 11.8 145 136-310 27-195 (605)
97 2kmk_A Zinc finger protein GFI 98.8 1.9E-09 6.6E-14 78.1 2.2 71 45-125 3-76 (82)
98 2en8_A Zinc finger protein 224 98.8 7.5E-09 2.6E-13 66.3 4.8 45 3-49 1-46 (46)
99 2emf_A Zinc finger protein 484 98.8 7.2E-09 2.5E-13 66.5 4.7 44 4-49 2-46 (46)
100 2eq0_A Zinc finger protein 347 98.8 7.5E-09 2.6E-13 66.4 4.7 44 4-49 2-46 (46)
101 2el6_A Zinc finger protein 268 98.8 8.3E-09 2.8E-13 66.2 4.9 44 4-49 2-46 (46)
102 2emh_A Zinc finger protein 484 98.8 5.3E-09 1.8E-13 67.1 3.9 45 3-49 1-46 (46)
103 2adr_A ADR1; transcription reg 98.8 4.7E-09 1.6E-13 71.4 3.8 49 13-63 1-50 (60)
104 2emp_A Zinc finger protein 347 98.8 4.9E-09 1.7E-13 67.3 3.7 45 3-49 1-46 (46)
105 1a1h_A QGSR zinc finger peptid 98.8 2.3E-09 7.8E-14 79.3 2.4 75 42-126 2-82 (90)
106 2ytd_A Zinc finger protein 473 98.8 7.2E-09 2.5E-13 66.5 4.5 44 4-49 2-46 (46)
107 2ep3_A Zinc finger protein 484 98.8 7.8E-09 2.7E-13 66.3 4.6 45 3-49 1-46 (46)
108 2ytm_A Zinc finger protein 28 98.8 4.6E-09 1.6E-13 67.5 3.5 45 3-49 1-46 (46)
109 2eq4_A Zinc finger protein 224 98.8 8.6E-09 2.9E-13 66.1 4.8 44 4-49 2-46 (46)
110 2em8_A Zinc finger protein 224 98.8 5.5E-09 1.9E-13 67.1 3.8 44 4-49 2-46 (46)
111 2epw_A Zinc finger protein 268 98.8 9.8E-09 3.3E-13 65.8 5.0 44 4-49 2-46 (46)
112 2epz_A Zinc finger protein 28 98.8 7.6E-09 2.6E-13 66.3 4.4 44 4-49 2-46 (46)
113 2emm_A ZFP-95, zinc finger pro 98.8 7.5E-09 2.6E-13 66.3 4.3 44 4-49 2-46 (46)
114 2gqj_A Zinc finger protein KIA 98.7 2E-09 6.7E-14 81.5 1.7 56 6-63 16-74 (98)
115 2eoq_A Zinc finger protein 224 98.7 9E-09 3.1E-13 66.0 4.6 44 4-49 2-46 (46)
116 2ytk_A Zinc finger protein 347 98.7 8.6E-09 2.9E-13 66.1 4.4 44 4-49 2-46 (46)
117 2em0_A Zinc finger protein 224 98.7 8.9E-09 3.1E-13 66.0 4.4 44 4-49 2-46 (46)
118 2yu8_A Zinc finger protein 347 98.7 5.9E-09 2E-13 66.9 3.5 44 4-49 2-46 (46)
119 1wjp_A Zinc finger protein 295 98.7 1.5E-09 5E-14 83.4 0.6 78 34-126 8-89 (107)
120 2ytg_A ZFP-95, zinc finger pro 98.7 6.2E-09 2.1E-13 66.8 3.5 44 4-49 2-46 (46)
121 2eoo_A ZFP-95, zinc finger pro 98.7 7.6E-09 2.6E-13 66.4 3.9 44 4-49 2-46 (46)
122 2ep2_A Zinc finger protein 484 98.7 1.3E-08 4.3E-13 65.3 4.8 44 4-49 2-46 (46)
123 2emx_A Zinc finger protein 268 98.7 9.2E-09 3.1E-13 65.3 4.1 42 6-49 2-44 (44)
124 2eop_A Zinc finger protein 268 98.7 1.2E-08 4.1E-13 65.3 4.7 44 4-49 2-46 (46)
125 2en1_A Zinc finger protein 224 98.7 1.3E-08 4.4E-13 65.3 4.7 44 4-49 2-46 (46)
126 2em5_A ZFP-95, zinc finger pro 98.7 1.2E-08 4.1E-13 65.4 4.6 44 4-49 2-46 (46)
127 2ep0_A Zinc finger protein 28 98.7 1.2E-08 4.2E-13 65.4 4.6 44 4-49 2-46 (46)
128 2epx_A Zinc finger protein 28 98.7 1.2E-08 4.2E-13 65.6 4.5 44 4-49 2-47 (47)
129 2ytt_A Zinc finger protein 473 98.7 5E-09 1.7E-13 67.3 2.5 44 4-49 2-46 (46)
130 1x6e_A Zinc finger protein 24; 98.7 4.5E-09 1.5E-13 74.5 2.4 47 80-126 16-62 (72)
131 2epq_A POZ-, at HOOK-, and zin 98.7 1.1E-08 3.9E-13 65.2 4.1 43 6-50 2-45 (45)
132 1bbo_A Human enhancer-binding 98.7 9.9E-09 3.4E-13 68.9 3.9 56 14-105 1-56 (57)
133 2em2_A Zinc finger protein 28 98.7 1.4E-08 4.9E-13 65.0 4.5 45 3-49 1-46 (46)
134 2ctd_A Zinc finger protein 512 98.7 4.6E-09 1.6E-13 79.2 2.4 53 8-63 28-83 (96)
135 2eme_A Zinc finger protein 473 98.7 1.6E-08 5.5E-13 64.7 4.7 43 5-49 3-46 (46)
136 2ct1_A Transcriptional repress 98.7 3.1E-09 1.1E-13 76.4 0.9 47 80-126 17-65 (77)
137 2epr_A POZ-, at HOOK-, and zin 98.7 2.3E-08 7.8E-13 64.8 5.0 44 6-51 4-48 (48)
138 2eoj_A Zinc finger protein 268 98.7 1.9E-08 6.4E-13 63.8 4.4 43 3-47 1-44 (44)
139 2em4_A Zinc finger protein 28 98.6 2.7E-08 9.2E-13 63.7 4.4 43 4-48 2-45 (46)
140 2ytp_A Zinc finger protein 484 98.6 3E-08 1E-12 63.5 4.6 43 4-48 2-45 (46)
141 2emi_A Zinc finger protein 484 98.6 3.3E-08 1.1E-12 63.3 4.6 44 3-48 1-45 (46)
142 2enh_A Zinc finger protein 28 98.6 3.5E-08 1.2E-12 63.2 4.5 42 4-47 2-44 (46)
143 2en9_A Zinc finger protein 28 98.6 2.9E-08 1E-12 63.6 4.1 44 3-48 1-45 (46)
144 2yts_A Zinc finger protein 484 98.6 4.7E-08 1.6E-12 62.5 4.7 43 4-48 2-45 (46)
145 2ytf_A Zinc finger protein 268 98.6 5.1E-08 1.7E-12 62.3 4.8 43 4-48 2-45 (46)
146 2eq1_A Zinc finger protein 347 98.6 3.9E-08 1.3E-12 62.9 4.2 44 3-48 1-45 (46)
147 2emg_A Zinc finger protein 484 98.6 4.4E-08 1.5E-12 62.7 4.4 43 4-48 2-45 (46)
148 2yto_A Zinc finger protein 484 98.6 4E-08 1.4E-12 62.9 4.2 44 3-48 1-45 (46)
149 2enf_A Zinc finger protein 347 98.6 4.6E-08 1.6E-12 62.6 4.5 43 4-48 2-45 (46)
150 2emj_A Zinc finger protein 28 98.6 4.5E-08 1.5E-12 62.7 4.4 43 4-48 2-45 (46)
151 2eq2_A Zinc finger protein 347 98.6 3.6E-08 1.2E-12 63.1 3.9 44 3-48 1-45 (46)
152 2eod_A TNF receptor-associated 98.6 4.3E-08 1.5E-12 68.1 4.5 60 9-106 5-65 (66)
153 2yrj_A Zinc finger protein 473 98.6 5.6E-08 1.9E-12 62.1 4.7 43 4-48 2-45 (46)
154 2eon_A ZFP-95, zinc finger pro 98.6 4.2E-08 1.4E-12 62.9 4.0 43 4-48 2-45 (46)
155 2epv_A Zinc finger protein 268 98.6 6.4E-08 2.2E-12 61.3 4.7 42 3-46 1-43 (44)
156 1x9m_A DNA polymerase; DNA plo 98.6 2E-08 7E-13 101.9 3.5 135 137-310 1-185 (698)
157 2epu_A Zinc finger protein 32; 98.6 6.3E-08 2.2E-12 61.6 4.6 42 4-47 2-44 (45)
158 2eow_A Zinc finger protein 347 98.6 5.5E-08 1.9E-12 62.2 4.3 43 4-48 2-45 (46)
159 2yti_A Zinc finger protein 347 98.6 5E-08 1.7E-12 62.4 4.1 43 4-48 2-45 (46)
160 2eoh_A Zinc finger protein 28 98.6 6.3E-08 2.1E-12 62.0 4.5 42 4-47 2-44 (46)
161 2eom_A ZFP-95, zinc finger pro 98.6 4.9E-08 1.7E-12 62.5 4.0 42 4-47 2-44 (46)
162 2drp_A Protein (tramtrack DNA- 98.6 1.9E-08 6.5E-13 69.8 2.1 55 39-103 5-65 (66)
163 2eoz_A Zinc finger protein 473 98.6 6.1E-08 2.1E-12 62.0 4.4 42 4-47 2-44 (46)
164 2yte_A Zinc finger protein 473 98.6 6.1E-08 2.1E-12 60.6 4.3 39 6-46 2-41 (42)
165 2en7_A Zinc finger protein 268 98.6 5.3E-08 1.8E-12 61.5 4.0 42 4-47 2-44 (44)
166 2eor_A Zinc finger protein 224 98.6 4.3E-08 1.5E-12 62.7 3.6 44 3-48 1-45 (46)
167 2yrm_A B-cell lymphoma 6 prote 98.6 4.8E-08 1.6E-12 61.6 3.7 40 6-47 2-42 (43)
168 2el5_A Zinc finger protein 268 98.5 6.1E-08 2.1E-12 60.6 4.1 40 6-47 2-42 (42)
169 1bbo_A Human enhancer-binding 98.5 4.2E-08 1.4E-12 65.8 3.5 47 80-126 3-49 (57)
170 2yth_A Zinc finger protein 224 98.5 6.7E-08 2.3E-12 61.8 4.3 43 4-48 2-45 (46)
171 1llm_C Chimera of ZIF23-GCN4; 98.5 3.4E-09 1.2E-13 78.3 -2.3 73 43-126 2-78 (88)
172 2wbs_A Krueppel-like factor 4; 98.5 3.6E-08 1.2E-12 72.5 3.3 71 45-125 7-84 (89)
173 2ept_A Zinc finger protein 32; 98.5 7.5E-08 2.6E-12 59.9 4.3 39 6-46 2-41 (41)
174 2ent_A Krueppel-like factor 15 98.5 8.8E-08 3E-12 61.7 4.8 43 5-49 3-48 (48)
175 2d9h_A Zinc finger protein 692 98.5 3.9E-08 1.3E-12 70.6 3.3 47 80-126 9-58 (78)
176 2eoy_A Zinc finger protein 473 98.5 7.7E-08 2.6E-12 61.5 4.3 42 4-47 2-45 (46)
177 2epa_A Krueppel-like factor 10 98.5 9.9E-08 3.4E-12 67.3 5.3 57 5-63 8-69 (72)
178 2em3_A Zinc finger protein 28 98.5 7.1E-08 2.4E-12 61.7 4.1 43 4-48 2-45 (46)
179 2yu5_A Zinc finger protein 473 98.5 8.8E-08 3E-12 60.6 4.5 40 5-46 3-43 (44)
180 2epc_A Zinc finger protein 32; 98.5 9E-08 3.1E-12 59.8 4.5 40 5-46 2-42 (42)
181 2eof_A Zinc finger protein 268 98.5 1E-07 3.4E-12 60.2 4.7 41 5-47 3-44 (44)
182 1vd4_A Transcription initiatio 98.5 1.4E-08 4.7E-13 69.9 0.6 51 5-60 5-56 (62)
183 3uk3_C Zinc finger protein 217 98.5 4.8E-08 1.6E-12 65.5 3.3 50 43-102 3-56 (57)
184 2em6_A Zinc finger protein 224 98.5 9.7E-08 3.3E-12 61.1 4.5 42 5-48 3-45 (46)
185 2emb_A Zinc finger protein 473 98.5 9.3E-08 3.2E-12 60.5 4.3 42 4-47 2-44 (44)
186 2lv2_A Insulinoma-associated p 98.5 4.4E-08 1.5E-12 71.9 3.1 57 39-105 23-84 (85)
187 2emz_A ZFP-95, zinc finger pro 98.5 4.2E-08 1.4E-12 62.8 2.6 43 3-47 1-44 (46)
188 2en2_A B-cell lymphoma 6 prote 98.5 5.4E-08 1.9E-12 60.9 3.1 40 5-46 2-42 (42)
189 2ep1_A Zinc finger protein 484 98.5 1E-07 3.4E-12 60.9 4.3 43 4-48 2-45 (46)
190 2eq3_A Zinc finger protein 347 98.5 1.2E-07 4E-12 60.6 4.5 42 5-48 3-45 (46)
191 2eos_A B-cell lymphoma 6 prote 98.5 7.6E-08 2.6E-12 60.2 3.4 39 6-46 3-42 (42)
192 2wbt_A B-129; zinc finger; 2.7 98.5 3.9E-08 1.3E-12 77.9 2.2 52 8-63 68-120 (129)
193 2ytb_A Zinc finger protein 32; 98.5 7.9E-08 2.7E-12 60.0 3.2 40 5-46 2-42 (42)
194 2elo_A Zinc finger protein 406 98.5 1.1E-07 3.7E-12 57.6 3.6 36 7-44 2-37 (37)
195 2ebt_A Krueppel-like factor 5; 98.5 1.2E-07 4.1E-12 71.2 4.6 73 42-124 13-93 (100)
196 2eox_A Zinc finger protein 473 98.5 8.4E-08 2.9E-12 60.7 3.0 41 4-46 2-43 (44)
197 2eou_A Zinc finger protein 473 98.5 1.2E-07 4.2E-12 59.9 3.6 41 5-47 3-44 (44)
198 2emk_A Zinc finger protein 28 98.4 1.7E-07 5.8E-12 59.9 4.0 33 80-112 14-46 (46)
199 2elx_A Zinc finger protein 406 98.4 2.3E-07 7.9E-12 55.2 3.9 35 8-44 1-35 (35)
200 2eq4_A Zinc finger protein 224 98.4 2.1E-07 7.3E-12 59.3 3.9 33 80-112 14-46 (46)
201 1srk_A Zinc finger protein ZFP 98.4 2.2E-07 7.6E-12 55.4 3.7 35 8-44 1-35 (35)
202 2en3_A ZFP-95, zinc finger pro 98.4 1.3E-07 4.6E-12 60.3 2.8 41 5-47 3-44 (46)
203 2eoq_A Zinc finger protein 224 98.4 2.3E-07 7.7E-12 59.2 3.9 33 80-112 14-46 (46)
204 2emy_A Zinc finger protein 268 98.4 1.9E-07 6.3E-12 59.6 3.4 33 80-112 14-46 (46)
205 2eov_A Zinc finger protein 484 98.4 2.6E-07 8.8E-12 58.9 4.0 33 80-112 14-46 (46)
206 2emm_A ZFP-95, zinc finger pro 98.4 2.1E-07 7.1E-12 59.4 3.5 33 80-112 14-46 (46)
207 2ely_A Zinc finger protein 224 98.4 3E-07 1E-11 58.7 4.1 33 80-112 14-46 (46)
208 2epw_A Zinc finger protein 268 98.4 2.4E-07 8.1E-12 59.1 3.5 33 80-112 14-46 (46)
209 1x3c_A Zinc finger protein 292 98.4 3.7E-07 1.3E-11 63.3 4.6 43 4-48 17-63 (73)
210 2ytd_A Zinc finger protein 473 98.4 2.4E-07 8.2E-12 59.1 3.5 33 80-112 14-46 (46)
211 2eoo_A ZFP-95, zinc finger pro 98.4 2E-07 7E-12 59.5 3.1 33 80-112 14-46 (46)
212 2ytn_A Zinc finger protein 347 98.4 2E-07 6.8E-12 59.5 3.0 33 80-112 14-46 (46)
213 2emh_A Zinc finger protein 484 98.4 2.1E-07 7.2E-12 59.4 3.1 33 80-112 14-46 (46)
214 2ytk_A Zinc finger protein 347 98.4 2.4E-07 8.1E-12 59.1 3.3 33 80-112 14-46 (46)
215 2ytj_A Zinc finger protein 484 98.4 2.7E-07 9.1E-12 58.9 3.5 33 80-112 14-46 (46)
216 2emx_A Zinc finger protein 268 98.4 2.5E-07 8.7E-12 58.4 3.4 33 80-112 12-44 (44)
217 2emp_A Zinc finger protein 347 98.4 2.2E-07 7.4E-12 59.3 3.1 33 80-112 14-46 (46)
218 2eop_A Zinc finger protein 268 98.4 2.2E-07 7.4E-12 59.3 3.1 33 80-112 14-46 (46)
219 2eoe_A Zinc finger protein 347 98.4 2.1E-07 7.3E-12 59.3 3.0 33 80-112 14-46 (46)
220 2eml_A Zinc finger protein 28 98.3 2E-07 6.7E-12 59.5 2.7 33 80-112 14-46 (46)
221 2yu8_A Zinc finger protein 347 98.3 2.1E-07 7.1E-12 59.4 2.8 33 80-112 14-46 (46)
222 2ep2_A Zinc finger protein 484 98.3 2.3E-07 7.8E-12 59.2 2.9 33 80-112 14-46 (46)
223 2em0_A Zinc finger protein 224 98.3 2.2E-07 7.5E-12 59.3 2.7 33 80-112 14-46 (46)
224 2ema_A Zinc finger protein 347 98.3 2.2E-07 7.5E-12 59.3 2.6 33 80-112 14-46 (46)
225 2el4_A Zinc finger protein 268 98.3 1.8E-07 6.1E-12 59.7 2.1 33 80-112 14-46 (46)
226 2ytr_A Zinc finger protein 347 98.3 2.6E-07 8.8E-12 58.9 2.9 33 80-112 14-46 (46)
227 2em5_A ZFP-95, zinc finger pro 98.3 2.1E-07 7E-12 59.5 2.4 33 80-112 14-46 (46)
228 2elm_A Zinc finger protein 406 98.3 3.8E-07 1.3E-11 55.3 3.6 34 7-42 2-36 (37)
229 2elq_A Zinc finger protein 406 98.3 4.8E-07 1.6E-11 54.3 3.9 34 7-42 2-35 (36)
230 2epq_A POZ-, at HOOK-, and zin 98.3 2.9E-07 9.9E-12 58.5 3.0 34 80-113 12-45 (45)
231 2epz_A Zinc finger protein 28 98.3 2.8E-07 9.6E-12 58.8 3.0 33 80-112 14-46 (46)
232 2en8_A Zinc finger protein 224 98.3 2.2E-07 7.6E-12 59.2 2.5 33 80-112 14-46 (46)
233 2elv_A Zinc finger protein 406 98.3 4.2E-07 1.4E-11 54.6 3.6 34 7-42 2-35 (36)
234 2ene_A Zinc finger protein 347 98.3 2.2E-07 7.6E-12 59.3 2.5 33 80-112 14-46 (46)
235 1p7a_A BF3, BKLF, kruppel-like 98.3 4.4E-07 1.5E-11 54.8 3.7 35 5-41 2-36 (37)
236 1njq_A Superman protein; zinc- 98.3 4.4E-07 1.5E-11 55.6 3.7 34 9-44 1-34 (39)
237 2eq0_A Zinc finger protein 347 98.3 2.5E-07 8.5E-12 59.0 2.6 33 80-112 14-46 (46)
238 2ytq_A Zinc finger protein 268 98.3 3.1E-07 1.1E-11 58.6 3.1 33 80-112 14-46 (46)
239 2ctu_A Zinc finger protein 483 98.3 4.2E-08 1.4E-12 69.2 -1.3 58 6-72 10-73 (73)
240 2elz_A Zinc finger protein 224 98.3 3.1E-07 1E-11 58.6 2.9 33 80-112 14-46 (46)
241 2emf_A Zinc finger protein 484 98.3 2.3E-07 8E-12 59.2 2.1 33 80-112 14-46 (46)
242 2eln_A Zinc finger protein 406 98.3 4.1E-07 1.4E-11 55.8 3.1 33 8-42 3-37 (38)
243 2eme_A Zinc finger protein 473 98.3 3.2E-07 1.1E-11 58.5 2.7 33 80-112 14-46 (46)
244 2adr_A ADR1; transcription reg 98.3 3.6E-07 1.2E-11 61.8 3.1 50 45-104 4-57 (60)
245 2yso_A ZFP-95, zinc finger pro 98.3 4E-07 1.4E-11 58.0 3.0 33 80-112 14-46 (46)
246 2em8_A Zinc finger protein 224 98.3 3.5E-07 1.2E-11 58.4 2.7 33 80-112 14-46 (46)
247 2en6_A Zinc finger protein 268 98.3 3.9E-07 1.3E-11 58.1 2.9 33 80-112 14-46 (46)
248 2em9_A Zinc finger protein 224 98.3 2.9E-07 9.9E-12 58.7 2.3 33 80-112 14-46 (46)
249 2ytg_A ZFP-95, zinc finger pro 98.3 2E-07 6.7E-12 59.5 1.4 33 80-112 14-46 (46)
250 2ytm_A Zinc finger protein 28 98.3 4E-07 1.4E-11 58.1 2.8 33 80-112 14-46 (46)
251 2en1_A Zinc finger protein 224 98.3 3E-07 1E-11 58.6 2.2 33 80-112 14-46 (46)
252 2yto_A Zinc finger protein 484 98.3 4.8E-07 1.6E-11 57.7 3.1 32 80-111 14-45 (46)
253 2eoh_A Zinc finger protein 28 98.3 6.3E-07 2.2E-11 57.1 3.7 32 80-111 14-45 (46)
254 2ep3_A Zinc finger protein 484 98.3 3.6E-07 1.2E-11 58.3 2.4 33 80-112 14-46 (46)
255 2elp_A Zinc finger protein 406 98.3 4.4E-07 1.5E-11 54.9 2.7 34 7-42 2-36 (37)
256 2yte_A Zinc finger protein 473 98.3 7.5E-07 2.6E-11 55.4 3.8 31 80-110 12-42 (42)
257 2enc_A Zinc finger protein 224 98.3 4.7E-07 1.6E-11 57.7 2.9 33 80-112 14-46 (46)
258 4gmj_B CCR4-NOT transcription 98.2 6.6E-06 2.3E-10 73.8 11.2 158 134-308 33-245 (285)
259 2em3_A Zinc finger protein 28 98.2 5.9E-07 2E-11 57.2 3.3 32 80-111 14-45 (46)
260 2eof_A Zinc finger protein 268 98.2 6.1E-07 2.1E-11 56.5 3.2 31 80-110 14-44 (44)
261 2eow_A Zinc finger protein 347 98.2 6.3E-07 2.1E-11 57.1 3.3 32 80-111 14-45 (46)
262 2elt_A Zinc finger protein 406 98.2 6.9E-07 2.3E-11 53.5 3.3 34 7-42 2-35 (36)
263 2en9_A Zinc finger protein 28 98.2 8.1E-07 2.8E-11 56.6 3.8 32 80-111 14-45 (46)
264 2emj_A Zinc finger protein 28 98.2 6.1E-07 2.1E-11 57.2 3.2 32 80-111 14-45 (46)
265 2el6_A Zinc finger protein 268 98.2 4E-07 1.4E-11 58.1 2.2 33 80-112 14-46 (46)
266 2eoz_A Zinc finger protein 473 98.2 5.9E-07 2E-11 57.3 3.0 32 80-111 14-45 (46)
267 2em7_A Zinc finger protein 224 98.2 3.4E-07 1.2E-11 58.4 1.9 33 80-112 14-46 (46)
268 1yui_A GAGA-factor; complex (D 98.2 2.8E-07 9.7E-12 61.1 1.5 29 80-108 26-54 (54)
269 2epr_A POZ-, at HOOK-, and zin 98.2 3.2E-07 1.1E-11 59.2 1.7 34 80-113 14-47 (48)
270 2enf_A Zinc finger protein 347 98.2 5.5E-07 1.9E-11 57.4 2.8 32 80-111 14-45 (46)
271 1f2i_G Fusion of N-terminal 17 98.2 3.7E-07 1.3E-11 64.4 2.0 54 39-102 14-73 (73)
272 2ytp_A Zinc finger protein 484 98.2 4.8E-07 1.7E-11 57.7 2.4 32 80-111 14-45 (46)
273 2ep1_A Zinc finger protein 484 98.2 6.4E-07 2.2E-11 57.0 2.9 31 80-110 14-44 (46)
274 2en7_A Zinc finger protein 268 98.2 5.5E-07 1.9E-11 56.7 2.6 31 80-110 14-44 (44)
275 2em6_A Zinc finger protein 224 98.2 6.4E-07 2.2E-11 57.1 2.8 32 80-111 14-45 (46)
276 2epx_A Zinc finger protein 28 98.2 6.6E-07 2.2E-11 57.2 2.8 33 80-112 14-47 (47)
277 2yu5_A Zinc finger protein 473 98.2 8.6E-07 2.9E-11 55.8 3.3 31 80-110 14-44 (44)
278 2ysp_A Zinc finger protein 224 98.2 3.9E-07 1.3E-11 58.1 1.7 33 80-112 14-46 (46)
279 2yti_A Zinc finger protein 347 98.2 6.5E-07 2.2E-11 57.0 2.8 32 80-111 14-45 (46)
280 2emg_A Zinc finger protein 484 98.2 7.1E-07 2.4E-11 56.8 2.9 31 80-110 14-44 (46)
281 2ytt_A Zinc finger protein 473 98.2 3.7E-07 1.3E-11 58.3 1.5 33 80-112 14-46 (46)
282 2eq2_A Zinc finger protein 347 98.2 6E-07 2E-11 57.2 2.5 32 80-111 14-45 (46)
283 2j7j_A Transcription factor II 98.2 3.9E-07 1.3E-11 66.0 1.7 66 45-123 3-78 (85)
284 2ytf_A Zinc finger protein 268 98.2 6.4E-07 2.2E-11 57.0 2.5 32 80-111 14-45 (46)
285 2yrm_A B-cell lymphoma 6 prote 98.2 8.3E-07 2.8E-11 55.7 3.0 31 80-110 12-42 (43)
286 2eq1_A Zinc finger protein 347 98.2 7.6E-07 2.6E-11 56.7 2.8 32 80-111 14-45 (46)
287 2ep0_A Zinc finger protein 28 98.2 5.3E-07 1.8E-11 57.4 2.0 33 80-112 14-46 (46)
288 2eou_A Zinc finger protein 473 98.2 8.6E-07 2.9E-11 55.9 2.9 31 80-110 14-44 (44)
289 2em2_A Zinc finger protein 28 98.2 9.3E-07 3.2E-11 56.3 3.0 33 80-112 14-46 (46)
290 2yth_A Zinc finger protein 224 98.2 7.5E-07 2.6E-11 56.8 2.6 32 80-111 14-45 (46)
291 2elr_A Zinc finger protein 406 98.2 1.2E-06 4.1E-11 52.4 3.3 34 7-42 2-35 (36)
292 2en3_A ZFP-95, zinc finger pro 98.2 7.4E-07 2.5E-11 56.7 2.4 32 80-111 14-45 (46)
293 2el5_A Zinc finger protein 268 98.2 6.4E-07 2.2E-11 55.8 2.1 31 80-110 12-42 (42)
294 2eq3_A Zinc finger protein 347 98.2 8.1E-07 2.8E-11 56.5 2.6 32 80-111 14-45 (46)
295 3iuf_A Zinc finger protein UBI 98.2 1E-06 3.5E-11 56.9 3.1 35 8-44 1-36 (48)
296 4dfk_A DNA polymerase I, therm 98.2 9.2E-07 3.2E-11 86.8 4.1 123 131-308 6-128 (540)
297 2yrj_A Zinc finger protein 473 98.2 7.1E-07 2.4E-11 56.8 2.2 32 80-111 14-45 (46)
298 2em4_A Zinc finger protein 28 98.2 8.8E-07 3E-11 56.4 2.7 32 80-111 14-45 (46)
299 2emz_A ZFP-95, zinc finger pro 98.2 8.6E-07 2.9E-11 56.5 2.6 32 80-111 14-45 (46)
300 2epp_A POZ-, at HOOK-, and zin 98.2 2.1E-06 7.3E-11 59.5 4.8 45 4-50 3-47 (66)
301 2yts_A Zinc finger protein 484 98.2 6.4E-07 2.2E-11 57.0 1.9 32 80-111 14-45 (46)
302 2eom_A ZFP-95, zinc finger pro 98.2 1.1E-06 3.7E-11 56.0 2.9 31 80-110 14-44 (46)
303 2eoj_A Zinc finger protein 268 98.2 8E-07 2.7E-11 55.9 2.3 31 80-110 14-44 (44)
304 2epc_A Zinc finger protein 32; 98.1 1.1E-06 3.6E-11 54.7 2.7 30 80-109 13-42 (42)
305 2els_A Zinc finger protein 406 98.1 1.4E-06 4.9E-11 52.1 3.1 33 8-42 3-35 (36)
306 2eor_A Zinc finger protein 224 98.1 1E-06 3.5E-11 56.0 2.5 31 80-110 14-44 (46)
307 2enh_A Zinc finger protein 28 98.1 7.9E-07 2.7E-11 56.6 1.9 32 80-111 14-45 (46)
308 2ytb_A Zinc finger protein 32; 98.1 6E-07 2E-11 55.9 1.3 30 80-109 13-42 (42)
309 2emi_A Zinc finger protein 484 98.1 9.8E-07 3.3E-11 56.2 2.1 32 80-111 14-45 (46)
310 1x6f_A Zinc finger protein 462 98.1 8.6E-07 2.9E-11 65.5 2.0 46 5-52 16-62 (88)
311 2eox_A Zinc finger protein 473 98.1 1.1E-06 3.9E-11 55.3 2.2 31 80-110 14-44 (44)
312 2epu_A Zinc finger protein 32; 98.1 8.7E-07 3E-11 56.2 1.6 31 80-110 14-44 (45)
313 1rim_A E6APC2 peptide; E6-bind 98.1 1.7E-06 5.8E-11 50.9 2.8 29 80-108 4-32 (33)
314 2ept_A Zinc finger protein 32; 98.1 8.6E-07 2.9E-11 54.9 1.4 30 80-109 12-41 (41)
315 2en2_A B-cell lymphoma 6 prote 98.1 1.2E-06 4E-11 54.6 1.8 30 80-109 13-42 (42)
316 2emb_A Zinc finger protein 473 98.1 1.1E-06 3.8E-11 55.3 1.7 31 80-110 14-44 (44)
317 2eps_A POZ-, at HOOK-, and zin 98.1 1.5E-06 5.3E-11 57.5 2.4 36 80-115 14-50 (54)
318 2eon_A ZFP-95, zinc finger pro 98.1 9.7E-07 3.3E-11 56.3 1.3 32 80-111 14-45 (46)
319 1x3c_A Zinc finger protein 292 98.1 2.8E-06 9.4E-11 58.9 3.5 33 80-112 29-64 (73)
320 2eos_A B-cell lymphoma 6 prote 98.0 1.2E-06 4.2E-11 54.5 1.3 30 80-109 13-42 (42)
321 2lce_A B-cell lymphoma 6 prote 98.0 1.4E-06 4.8E-11 61.6 1.7 47 80-126 19-65 (74)
322 2eoy_A Zinc finger protein 473 98.0 1.8E-06 6.1E-11 55.0 1.8 31 80-110 14-45 (46)
323 1bhi_A CRE-BP1, ATF-2; CRE bin 98.0 2.7E-06 9.1E-11 51.6 2.6 34 9-44 1-36 (38)
324 1fv5_A First zinc finger of U- 98.0 3.5E-06 1.2E-10 50.9 2.7 29 8-36 2-30 (36)
325 1va1_A Transcription factor SP 98.0 3.4E-06 1.2E-10 50.9 2.6 33 8-42 2-36 (37)
326 1rim_A E6APC2 peptide; E6-bind 98.0 3.7E-06 1.3E-10 49.4 2.5 30 13-44 1-30 (33)
327 2ent_A Krueppel-like factor 15 98.0 2.7E-06 9.1E-11 54.5 2.0 33 80-112 14-48 (48)
328 1njq_A Superman protein; zinc- 98.0 3.1E-06 1.1E-10 51.7 2.2 30 80-109 8-37 (39)
329 1yui_A GAGA-factor; complex (D 98.0 3.3E-06 1.1E-10 55.8 2.4 37 6-44 16-52 (54)
330 2epv_A Zinc finger protein 268 97.9 3.5E-06 1.2E-10 53.0 1.9 30 80-109 14-43 (44)
331 3saf_A Exosome component 10; e 97.9 5.1E-05 1.7E-09 72.2 10.0 83 226-310 180-279 (428)
332 2cot_A Zinc finger protein 435 97.9 1E-05 3.4E-10 57.6 4.0 39 6-46 38-77 (77)
333 2m0d_A Zinc finger and BTB dom 97.8 1.1E-05 3.8E-10 45.5 3.0 29 12-42 1-29 (30)
334 2kvg_A Zinc finger and BTB dom 97.8 1.1E-05 3.9E-10 44.7 2.6 25 12-36 1-25 (27)
335 2kvh_A Zinc finger and BTB dom 97.8 1.4E-05 4.7E-10 44.2 2.9 27 12-40 1-27 (27)
336 1rik_A E6APC1 peptide; E6-bind 97.8 1.2E-05 4E-10 45.2 2.4 28 13-42 1-28 (29)
337 2ghf_A ZHX1, zinc fingers and 97.8 1.2E-05 4.2E-10 60.9 3.1 40 10-51 46-87 (102)
338 1ncs_A Peptide M30F, transcrip 97.8 5.7E-06 1.9E-10 53.0 1.0 36 6-43 10-47 (47)
339 2kvf_A Zinc finger and BTB dom 97.8 1.6E-05 5.3E-10 44.3 2.7 28 12-41 1-28 (28)
340 2epa_A Krueppel-like factor 10 97.7 1E-05 3.5E-10 56.7 2.0 37 84-120 25-63 (72)
341 1ard_A Yeast transcription fac 97.7 1.6E-05 5.4E-10 44.5 2.4 28 13-42 1-28 (29)
342 2elx_A Zinc finger protein 406 97.7 1.5E-05 5.3E-10 46.9 2.4 27 80-106 9-35 (35)
343 1zfd_A SWI5; DNA binding motif 97.7 2.3E-05 7.8E-10 45.2 2.7 29 12-42 1-31 (32)
344 2elo_A Zinc finger protein 406 97.7 1.9E-05 6.5E-10 47.3 2.2 27 80-106 11-37 (37)
345 1sp2_A SP1F2; zinc finger, tra 97.7 2.6E-05 9E-10 44.6 2.7 29 13-43 1-31 (31)
346 2m0f_A Zinc finger and BTB dom 97.7 1.8E-05 6.1E-10 44.3 1.9 28 13-42 1-28 (29)
347 2ej4_A Zinc finger protein ZIC 97.6 3.6E-05 1.2E-09 56.8 4.1 61 66-126 13-82 (95)
348 2kfq_A FP1; protein, de novo p 97.6 2.5E-06 8.4E-11 49.8 -2.0 30 13-44 1-30 (32)
349 2d9k_A FLN29 gene product; zin 97.6 1.2E-05 4E-10 57.3 1.1 42 6-51 9-51 (75)
350 2lvt_A Zinc finger and BTB dom 96.8 8E-06 2.7E-10 46.0 0.0 28 13-42 1-28 (29)
351 2m0e_A Zinc finger and BTB dom 97.6 1.7E-05 5.8E-10 44.3 1.4 28 13-42 1-28 (29)
352 2kfq_A FP1; protein, de novo p 97.6 1.5E-06 5.3E-11 50.7 -3.3 28 80-107 4-31 (32)
353 1klr_A Zinc finger Y-chromosom 97.6 2.6E-05 9.1E-10 43.8 2.2 29 13-43 1-29 (30)
354 1paa_A Yeast transcription fac 97.6 2.6E-05 8.9E-10 44.0 2.1 28 13-42 1-29 (30)
355 1klr_A Zinc finger Y-chromosom 97.6 3.2E-05 1.1E-09 43.5 2.5 27 80-106 4-30 (30)
356 1ard_A Yeast transcription fac 97.6 3.3E-05 1.1E-09 43.2 2.5 26 80-105 4-29 (29)
357 2lvr_A Zinc finger and BTB dom 96.8 9.1E-06 3.1E-10 46.0 0.0 29 12-42 1-29 (30)
358 2d5r_A CCR4-NOT transcription 97.6 0.00059 2E-08 60.0 11.5 157 135-308 24-235 (252)
359 2e6m_A Werner syndrome ATP-dep 97.6 0.00037 1.3E-08 59.7 9.8 92 206-310 86-197 (208)
360 1znf_A 31ST zinc finger from X 97.6 3.8E-05 1.3E-09 42.2 2.4 26 14-41 1-26 (27)
361 1srk_A Zinc finger protein ZFP 97.5 2.6E-05 8.9E-10 46.0 1.6 27 80-106 9-35 (35)
362 2m0f_A Zinc finger and BTB dom 97.5 3.2E-05 1.1E-09 43.2 1.9 26 80-105 4-29 (29)
363 1vd4_A Transcription initiatio 97.5 4.4E-06 1.5E-10 57.0 -2.2 25 33-59 5-30 (62)
364 1bhi_A CRE-BP1, ATF-2; CRE bin 97.5 3.7E-05 1.3E-09 46.3 2.2 29 80-108 8-38 (38)
365 2m0e_A Zinc finger and BTB dom 97.5 3.6E-05 1.2E-09 42.9 2.0 26 80-105 4-29 (29)
366 2eod_A TNF receptor-associated 97.5 1.5E-05 5.2E-10 54.9 0.5 45 79-125 11-56 (66)
367 1rik_A E6APC1 peptide; E6-bind 97.5 2.6E-05 9E-10 43.6 1.4 26 80-105 4-29 (29)
368 2p51_A SPCC18.06C protein; DED 97.5 0.00092 3.1E-08 60.7 11.6 159 133-308 43-256 (333)
369 1noy_A Protein (DNA polymerase 97.5 0.00068 2.3E-08 63.9 11.3 159 132-304 103-335 (388)
370 2m0d_A Zinc finger and BTB dom 97.5 4E-05 1.4E-09 43.0 1.8 26 80-105 5-30 (30)
371 2lvu_A Zinc finger and BTB dom 96.6 1.7E-05 5.7E-10 43.4 0.0 24 13-36 1-24 (26)
372 2eln_A Zinc finger protein 406 97.5 6.6E-05 2.2E-09 45.8 2.7 25 80-104 11-37 (38)
373 2elr_A Zinc finger protein 406 97.5 5.8E-05 2E-09 44.7 2.4 26 80-105 11-36 (36)
374 2lvt_A Zinc finger and BTB dom 96.6 1.8E-05 6.3E-10 44.4 0.0 26 80-105 4-29 (29)
375 2d9k_A FLN29 gene product; zin 97.4 3.7E-06 1.3E-10 60.0 -3.8 62 29-106 4-70 (75)
376 2els_A Zinc finger protein 406 97.4 6.6E-05 2.3E-09 44.5 2.3 26 80-105 11-36 (36)
377 1znf_A 31ST zinc finger from X 97.4 3.5E-05 1.2E-09 42.3 0.9 25 80-104 3-27 (27)
378 2elt_A Zinc finger protein 406 97.4 7.8E-05 2.7E-09 44.1 2.2 26 80-105 11-36 (36)
379 1sp2_A SP1F2; zinc finger, tra 97.4 5.8E-05 2E-09 43.1 1.4 26 80-105 4-31 (31)
380 2lvr_A Zinc finger and BTB dom 96.4 3.1E-05 1E-09 43.7 0.0 26 80-105 5-30 (30)
381 2elq_A Zinc finger protein 406 97.3 9.5E-05 3.3E-09 43.8 2.1 26 80-105 11-36 (36)
382 2ab3_A ZNF29; zinc finger prot 97.3 0.00014 4.8E-09 40.4 2.7 27 13-41 1-29 (29)
383 2elp_A Zinc finger protein 406 97.3 9.4E-05 3.2E-09 44.1 2.0 26 80-105 11-37 (37)
384 1fv5_A First zinc finger of U- 97.3 6.9E-05 2.4E-09 45.1 1.3 24 80-110 10-33 (36)
385 2elv_A Zinc finger protein 406 97.3 6.4E-05 2.2E-09 44.6 1.2 26 80-105 11-36 (36)
386 1zfd_A SWI5; DNA binding motif 97.3 9.5E-05 3.3E-09 42.4 1.8 26 80-105 5-32 (32)
387 1qht_A Protein (DNA polymerase 97.3 0.001 3.4E-08 68.3 10.4 146 133-306 133-328 (775)
388 1x6f_A Zinc finger protein 462 97.2 3.3E-05 1.1E-09 56.8 -0.7 35 80-114 27-61 (88)
389 1p7a_A BF3, BKLF, kruppel-like 97.2 0.00014 4.9E-09 43.2 2.3 25 80-104 13-37 (37)
390 1uoc_A POP2; hydrolase, DEDD n 97.2 0.00099 3.4E-08 59.6 8.6 79 227-308 154-265 (289)
391 1paa_A Yeast transcription fac 97.2 8.1E-05 2.8E-09 41.9 1.0 26 80-105 4-30 (30)
392 2kvh_A Zinc finger and BTB dom 97.2 0.00012 4.2E-09 40.1 1.7 23 80-102 5-27 (27)
393 1vk0_A Hypothetical protein; h 97.2 0.00017 5.9E-09 61.7 3.4 89 207-307 99-206 (206)
394 2kvf_A Zinc finger and BTB dom 97.1 0.0001 3.6E-09 40.7 0.8 24 80-103 5-28 (28)
395 2epp_A POZ-, at HOOK-, and zin 97.1 0.0003 1E-08 48.6 3.2 27 80-106 15-41 (66)
396 2kvg_A Zinc finger and BTB dom 97.1 0.00011 3.6E-09 40.5 0.5 23 80-102 5-27 (27)
397 1va1_A Transcription factor SP 97.1 0.00021 7.2E-09 42.7 1.8 26 80-105 10-37 (37)
398 2lvu_A Zinc finger and BTB dom 96.1 9.2E-05 3.1E-09 40.3 0.0 23 80-102 4-26 (26)
399 3pv8_A DNA polymerase I; DNA p 97.0 0.00043 1.5E-08 68.6 4.2 94 204-310 69-183 (592)
400 1yt3_A Ribonuclease D, RNAse D 96.9 0.0024 8.2E-08 59.8 8.0 83 227-310 73-172 (375)
401 2ab3_A ZNF29; zinc finger prot 96.8 0.00032 1.1E-08 38.8 1.1 24 80-103 4-29 (29)
402 1ncs_A Peptide M30F, transcrip 96.8 0.00054 1.8E-08 43.4 2.2 26 80-105 20-47 (47)
403 2elm_A Zinc finger protein 406 96.8 0.0005 1.7E-08 40.9 1.9 25 80-104 11-36 (37)
404 3iuf_A Zinc finger protein UBI 96.8 0.00037 1.3E-08 44.5 1.2 27 80-106 9-36 (48)
405 1s5j_A DNA polymerase I; repli 96.7 0.0092 3.2E-07 61.7 11.5 151 132-302 187-387 (847)
406 3qex_A DNA polymerase, GP43; d 96.7 0.0084 2.9E-07 62.0 10.8 159 132-303 105-337 (903)
407 3iay_A DNA polymerase delta ca 96.7 0.0055 1.9E-07 63.8 9.6 150 132-304 246-465 (919)
408 2a1r_A Poly(A)-specific ribonu 96.6 0.0064 2.2E-07 57.8 9.3 82 227-310 280-399 (430)
409 3d45_A Poly(A)-specific ribonu 96.6 0.0035 1.2E-07 61.0 7.5 81 227-309 275-393 (507)
410 2hbj_A Exosome complex exonucl 96.5 0.0052 1.8E-07 58.2 7.6 82 227-310 158-256 (410)
411 2gv9_A DNA polymerase; polymer 96.4 0.028 9.6E-07 60.0 12.8 100 195-306 395-552 (1193)
412 3k59_A POL II, DNA polymerase 96.1 0.029 1E-06 57.4 10.9 146 131-304 149-349 (786)
413 3cym_A Uncharacterized protein 95.8 0.02 6.7E-07 54.7 7.9 90 205-310 84-189 (440)
414 1zr9_A Zinc finger protein 593 95.4 0.0039 1.3E-07 48.3 1.0 31 6-36 42-72 (124)
415 1zw8_A Zinc-responsive transcr 92.1 0.15 5E-06 34.5 3.7 25 17-43 6-31 (64)
416 2e72_A POGO transposable eleme 91.7 0.16 5.6E-06 31.6 3.2 24 13-36 11-34 (49)
417 2e72_A POGO transposable eleme 88.3 0.32 1.1E-05 30.3 2.5 22 80-101 14-35 (49)
418 1zu1_A DSRBP-ZFA, RNA binding 85.2 0.79 2.7E-05 35.5 3.9 73 13-99 31-114 (127)
419 1zw8_A Zinc-responsive transcr 84.9 0.6 2E-05 31.4 2.7 51 47-101 7-63 (64)
420 4ayb_P DNA-directed RNA polyme 82.3 0.48 1.6E-05 29.4 1.2 21 67-87 4-32 (48)
421 1zr9_A Zinc finger protein 593 81.9 0.47 1.6E-05 36.6 1.3 22 80-101 52-73 (124)
422 2jsp_A Transcriptional regulat 78.6 0.82 2.8E-05 32.7 1.6 29 80-111 23-51 (87)
423 3ikm_A DNA polymerase subunit 77.2 0.43 1.5E-05 49.6 -0.3 84 227-310 193-349 (1172)
424 2py5_A DNA polymerase; protein 76.7 2.5 8.5E-05 41.6 5.0 37 268-305 127-181 (575)
425 3mjh_B Early endosome antigen 72.1 4.3 0.00015 23.4 3.2 28 13-41 4-31 (34)
426 3hcs_A TNF receptor-associated 69.5 2.4 8.3E-05 34.3 2.5 34 81-115 113-146 (170)
427 1fu9_A U-shaped transcriptiona 68.3 8.3 0.00029 22.4 3.8 26 11-36 5-30 (36)
428 2yqq_A Zinc finger HIT domain- 66.8 5 0.00017 26.1 3.0 38 66-104 12-49 (56)
429 2gmg_A Hypothetical protein PF 62.5 3.1 0.0001 30.8 1.5 11 66-76 67-77 (105)
430 3mjh_B Early endosome antigen 62.0 4.9 0.00017 23.2 2.0 22 80-101 7-28 (34)
431 1bgx_T TAQ DNA polymerase; DNA 59.9 5 0.00017 41.2 3.2 67 235-309 352-421 (832)
432 3q7c_A Nucleoprotein; deddh ex 58.0 8.2 0.00028 32.2 3.5 140 135-297 57-211 (243)
433 2lcq_A Putative toxin VAPC6; P 57.0 3.1 0.00011 33.5 0.9 23 65-87 131-157 (165)
434 1vq8_Z 50S ribosomal protein L 56.6 2.8 9.6E-05 29.7 0.4 27 65-91 26-58 (83)
435 2k5c_A Uncharacterized protein 56.2 3.4 0.00012 28.8 0.8 18 45-63 10-27 (95)
436 2yrk_A Zinc finger homeobox pr 55.1 7.5 0.00026 24.9 2.2 20 15-34 14-33 (55)
437 2djr_A Zinc finger BED domain- 53.8 6.7 0.00023 27.2 2.0 23 80-102 30-59 (76)
438 1wjv_A Cell growth regulating 51.6 16 0.00054 25.4 3.6 50 10-63 6-56 (79)
439 1zu1_A DSRBP-ZFA, RNA binding 51.6 10 0.00036 29.0 3.1 27 9-35 88-114 (127)
440 3cc2_Z 50S ribosomal protein L 51.0 3.9 0.00013 30.8 0.4 28 64-91 58-91 (116)
441 1twf_L ABC10-alpha, DNA-direct 46.5 5.3 0.00018 27.3 0.5 9 67-75 29-37 (70)
442 1ffk_W Ribosomal protein L37AE 43.1 8.2 0.00028 26.5 1.1 27 65-91 26-58 (73)
443 2elu_A Zinc finger protein 406 42.4 14 0.00047 20.8 1.7 22 81-102 12-33 (37)
444 2i5o_A DNA polymerase ETA; zin 42.2 12 0.00042 22.2 1.6 24 12-36 7-30 (39)
445 3jyw_9 60S ribosomal protein L 42.0 12 0.00042 25.5 1.8 9 81-89 47-55 (72)
446 2jvx_A NF-kappa-B essential mo 41.3 16 0.00056 20.0 1.9 22 14-35 3-24 (28)
447 1vfy_A Phosphatidylinositol-3- 39.5 12 0.00041 25.5 1.5 25 45-76 13-37 (73)
448 3mwp_A Nucleoprotein; structur 37.5 20 0.0007 33.3 3.0 141 134-297 390-545 (577)
449 3j21_i 50S ribosomal protein L 36.9 13 0.00045 26.2 1.3 26 65-90 34-65 (83)
450 2xzl_A ATP-dependent helicase 36.8 26 0.00088 35.8 4.1 43 67-115 26-80 (802)
451 2czr_A TBP-interacting protein 36.3 14 0.00048 30.0 1.6 24 15-41 155-178 (226)
452 2yw8_A RUN and FYVE domain-con 35.8 16 0.00055 25.5 1.7 25 45-76 21-45 (82)
453 3hcs_A TNF receptor-associated 35.7 20 0.00069 28.6 2.6 82 14-108 82-166 (170)
454 2yu4_A E3 SUMO-protein ligase 35.2 29 0.00099 24.7 3.1 46 66-112 7-54 (94)
455 3iz5_m 60S ribosomal protein L 34.4 15 0.00051 26.4 1.3 26 65-90 35-66 (92)
456 3izc_m 60S ribosomal protein R 34.3 16 0.00054 26.3 1.4 26 65-90 35-66 (92)
457 1joc_A EEA1, early endosomal a 33.0 15 0.00053 28.0 1.3 25 45-76 71-95 (125)
458 3ga8_A HTH-type transcriptiona 32.4 27 0.00094 24.0 2.5 17 81-97 39-55 (78)
459 1z2q_A LM5-1; membrane protein 32.1 18 0.00063 25.3 1.5 25 45-76 23-47 (84)
460 1y02_A CARP2, FYVE-ring finger 32.1 18 0.0006 27.5 1.5 25 45-76 21-45 (120)
461 2apo_B Ribosome biogenesis pro 31.7 20 0.00068 23.6 1.5 20 68-87 8-27 (60)
462 2wjy_A Regulator of nonsense t 30.2 19 0.00066 36.7 1.9 42 68-115 22-75 (800)
463 1x4u_A Zinc finger, FYVE domai 28.2 22 0.00077 24.9 1.4 25 45-76 16-40 (84)
464 1x4s_A Protein FON, zinc finge 27.1 29 0.00098 22.7 1.6 30 68-97 13-45 (59)
465 4a17_Y RPL37A, 60S ribosomal p 26.4 15 0.00051 26.9 0.2 26 65-90 35-66 (103)
466 1wfk_A Zinc finger, FYVE domai 26.2 23 0.00079 25.2 1.2 31 45-86 11-41 (88)
467 1gh9_A 8.3 kDa protein (gene M 25.6 17 0.00059 24.7 0.4 6 81-87 24-29 (71)
468 3vk6_A E3 ubiquitin-protein li 25.4 98 0.0034 22.5 4.4 22 82-103 65-87 (101)
469 2kdx_A HYPA, hydrogenase/ureas 25.0 33 0.0011 25.7 1.9 24 80-115 75-99 (119)
470 1dvp_A HRS, hepatocyte growth 25.0 26 0.00088 29.5 1.4 24 68-91 163-190 (220)
471 3t7l_A Zinc finger FYVE domain 24.2 28 0.00096 24.7 1.3 25 45-76 22-46 (90)
472 3zyq_A Hepatocyte growth facto 23.6 30 0.001 29.3 1.6 24 68-91 166-193 (226)
473 2yuc_A TNF receptor-associated 22.7 91 0.0031 20.8 3.7 18 45-63 46-63 (76)
474 3pwf_A Rubrerythrin; non heme 22.5 20 0.0007 28.9 0.3 11 104-114 151-161 (170)
475 1pft_A TFIIB, PFTFIIBN; N-term 21.6 43 0.0015 20.6 1.6 10 81-90 27-36 (50)
476 2odx_A Cytochrome C oxidase po 21.4 39 0.0013 23.6 1.5 14 13-26 55-68 (80)
477 3sp4_A Aprataxin-like protein; 21.1 40 0.0014 28.1 1.9 23 80-102 171-194 (204)
478 3a43_A HYPD, hydrogenase nicke 20.8 28 0.00095 27.1 0.8 10 106-115 107-116 (139)
479 2kr4_A Ubiquitin conjugation f 20.8 83 0.0028 21.7 3.3 44 66-115 14-57 (85)
480 2aus_D NOP10, ribosome biogene 20.8 35 0.0012 22.3 1.1 20 68-87 7-26 (60)
481 1lko_A Rubrerythrin all-iron(I 20.5 20 0.00069 29.5 -0.1 10 105-114 170-179 (191)
482 3ttc_A HYPF, transcriptional r 20.2 20 0.0007 35.6 -0.2 31 80-116 69-99 (657)
No 1
>1wlj_A Interferon stimulated gene 20KDA; exoribonuclease, hydrolase; HET: U5P; 1.90A {Homo sapiens} SCOP: c.55.3.5
Probab=100.00 E-value=1.8e-32 Score=235.88 Aligned_cols=163 Identities=33% Similarity=0.532 Sum_probs=139.2
Q ss_pred CCCceeeccCccccccCCCCccceeEEeeecCCCCeEEeeeccCCCCccccccccCCCCHhhhcCCCChHHHHHHHHHHH
Q 018586 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEIL 212 (353)
Q Consensus 133 ~~~~~~~~D~Ettg~~~~~~~~il~~v~ivd~~g~~~~~~lv~P~~~i~~~~~~~~GIt~e~l~~~~~~~~v~~~~~~~~ 212 (353)
...+++++|+||||+++.+..++ +++.+++.+|+++|++||+|..+|+++++++||||+++|+++|++++|+++|.+|+
T Consensus 3 ~~~~~vviD~ETTGl~~~~~~~i-iei~~v~~~g~~i~~~lV~P~~~i~~~~~~i~GIt~~~l~~a~~~~~v~~~~~~~l 81 (189)
T 1wlj_A 3 GSREVVAMDCEMVGLGPHRESGL-ARCSLVNVHGAVLYDKFIRPEGEITDYRTRVSGVTPQHMVGATPFAVARLEILQLL 81 (189)
T ss_dssp ---CEEEEEEEEEEETTTTEEEE-EEEEEECTTCCEEEEEEEECSSCEEECCHHHHCCCHHHHTTCEEHHHHHHHHHHHH
T ss_pred CCCeEEEEEeECcCcCCCCCceE-EEEEEEeCCCCEEEeeEecCCCCCCccccCCCCCCHHHHcCCCCHHHHHHHHHHHH
Confidence 34579999999999976654444 57777888999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCcccccCCCCCcEEEecccHHHHHHhcCcCCCCceeecccccCC----cccCCCCCcHHHHHHHHhCCcCCCC--
Q 018586 213 NNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPL----MKTNLVSHSLKYLTRTYLGYDIQSG-- 286 (353)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~~~~~~Dt~~l~~~----~~~~~~~~~L~~l~~~~~~~~~~~~-- 286 (353)
++.+|||||+.||+.||+..+|...++||+.++.. ..|...+++|+.|++.++|++++.+
T Consensus 82 --------------~~~~lV~hn~~fD~~~L~~~~~~~~~idt~~~~~~~~~~~~p~~~~~~L~~l~~~~lgi~~~~~~~ 147 (189)
T 1wlj_A 82 --------------KGKLVVGHDLKHDFQALKEDMSGYTIYDTSTDRLLWREAKLDHCRRVSLRVLSERLLHKSIQNSLL 147 (189)
T ss_dssp --------------TTSEEEESSHHHHHHHTTCCCTTCEEEEGGGCHHHHHHHTC-----CCHHHHHHHHTCCCCSCCTT
T ss_pred --------------CCCEEEECCcHHHHHHHHHhCCCCceechHhhhhhhhcccCCCCCCccHHHHHHHHcCCCCCCCCC
Confidence 78999999999999999998988789999987532 2344578999999999669998765
Q ss_pred CCChHHHHHHHHHHHHHHHhchhh
Q 018586 287 VHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 287 ~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
+|+|++||++|++||.++.+.++.
T Consensus 148 ~H~Al~Da~ata~l~~~l~~~~~~ 171 (189)
T 1wlj_A 148 GHSSVEDARATMELYQISQRIRAR 171 (189)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998766
No 2
>2p1j_A POLIII, DNA polymerase III POLC-type; structural genomics, exonuclease, PSI-2, protein structure initiative; HET: DNA; 2.50A {Thermotoga maritima MSB8}
Probab=99.96 E-value=3.5e-29 Score=214.81 Aligned_cols=160 Identities=22% Similarity=0.322 Sum_probs=133.5
Q ss_pred ccCCCceeeccCccccccC--CCCccceeEEeeecCCCCeE--EeeeccCCCCccccccccCCCCHhhhcCCCChHHHHH
Q 018586 131 TCRGPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI--FHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKD 206 (353)
Q Consensus 131 ~~~~~~~~~~D~Ettg~~~--~~~~~il~~v~ivd~~g~~~--~~~lv~P~~~i~~~~~~~~GIt~e~l~~~~~~~~v~~ 206 (353)
+....+++++|+||||+++ +.++++ +.|.+ .+|+++ |+.+|+|..+++++++++||||+++|+++|++.+|++
T Consensus 8 ~l~~~~~v~iD~ETTGl~~~~~~IieI-g~v~~--~~g~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~v~~ 84 (186)
T 2p1j_A 8 TFGDATFVVLDFETTGLDPQVDEIIEI-GAVKI--QGGQIVDEYHTLIKPSREISRKSSEITGITQEMLENKRSIEEVLP 84 (186)
T ss_dssp -----CEEEEEEEESCSCTTTCCEEEE-EEEEE--ETTEEEEEEEEECBCSSCCCHHHHHHHCCCHHHHTTCCBHHHHHH
T ss_pred cCcCCCEEEEEEECCCCCCCCCeEEEE-EEEEE--ECCEEEEEEEEEECcCCCCCHHHhhhcCCCHHHHhcCCCHHHHHH
Confidence 3455689999999999864 456666 56666 367765 9999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhc-------CcCCCCceeecccccCCcccCCCCCcHHHHHHHHh
Q 018586 207 KILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-------MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYL 279 (353)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-------~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~ 279 (353)
+|.+|+ ++.+|||||+.||+.||+ +..+...++||+.+++.+. ...+++|+.|++.|
T Consensus 85 ~~~~~l--------------~~~~lv~hn~~fD~~~L~~~~~~~g~~~~~~~~iDt~~l~~~~~-~~~~~~L~~l~~~~- 148 (186)
T 2p1j_A 85 EFLGFL--------------EDSIIVAHNANFDYRFLRLWIKKVMGLDWERPYIDTLALAKSLL-KLRSYSLDSVVEKL- 148 (186)
T ss_dssp HHHHHS--------------SSCEEEETTHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHT-CCSCCSHHHHHHHT-
T ss_pred HHHHHH--------------CCCEEEEECcHHHHHHHHHHHHHcCCCCCCCCEEeHHHHHHHHh-hcCCCCHHHHHHHc-
Confidence 999999 788999999999999997 3344567899999988776 56789999999987
Q ss_pred CCcCCCCCCChHHHHHHHHHHHHHHHhchhh
Q 018586 280 GYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 280 ~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
|++.. ++|+|++||++|++||.++.+++.+
T Consensus 149 gi~~~-~~H~Al~Da~~t~~l~~~l~~~~~~ 178 (186)
T 2p1j_A 149 GLGPF-RHHRALDDARVTAQVFLRFVEMMKK 178 (186)
T ss_dssp TCCST-TCCHHHHHHHHHHHHHHHHTTCC--
T ss_pred CCCCC-CCcCHHHHHHHHHHHHHHHHHHHHh
Confidence 99854 5899999999999999999887554
No 3
>2gui_A DNA polymerase III epsilon subunit; DNA polymerase proofreading domain, transferase; HET: DNA U5P; 1.60A {Escherichia coli} SCOP: c.55.3.5 PDB: 1j54_A* 1j53_A* 2ido_A* 2xy8_A*
Probab=99.96 E-value=7.9e-29 Score=214.13 Aligned_cols=158 Identities=20% Similarity=0.323 Sum_probs=132.3
Q ss_pred CCceeeccCccccccC-------CCCccceeEEeeecCCCCe---EEeeeccCCCCccccccccCCCCHhhhcCCCChHH
Q 018586 134 GPKAVAMDCEMVGGGS-------NGTLDLCARVCLVDEDENV---IFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKE 203 (353)
Q Consensus 134 ~~~~~~~D~Ettg~~~-------~~~~~il~~v~ivd~~g~~---~~~~lv~P~~~i~~~~~~~~GIt~e~l~~~~~~~~ 203 (353)
.++++++|+||||+++ +.++++ +.|.+. +|.+ .|+.+|+|..+++++++++||||+++|+++|++.+
T Consensus 8 ~~~~vviD~ETTGl~~~~~~~~~~~Iiei-g~v~~~--~~~~~~~~f~~lv~P~~~i~~~~~~i~GIt~~~l~~~~~~~~ 84 (194)
T 2gui_A 8 ITRQIVLDTETTGMNQIGAHYEGHKIIEI-GAVEVV--NRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAE 84 (194)
T ss_dssp CCEEEEEEEEESCCCSSSSTTTTCCEEEE-EEEEEE--TTEECSCCEEEECCCSSCCCHHHHHHHCCCHHHHTTSCCHHH
T ss_pred cCCEEEEEeeCCCCCCcccCCCCCEEEEE-EEEEEE--CCeEeccEEEEEECcCCcCCHHHHHhhCcCHHHHhCCCCHHH
Confidence 3679999999999876 456666 666663 4554 48999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhc-------CcCCC----CceeecccccCCcccCCCCCcHH
Q 018586 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-------MNYPD----HMLRDTAKYRPLMKTNLVSHSLK 272 (353)
Q Consensus 204 v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-------~~~~~----~~~~Dt~~l~~~~~~~~~~~~L~ 272 (353)
|+++|.+|+ ++.+|||||+.||+.||+ +..|. ..++||+.+++.++|.. .++|+
T Consensus 85 v~~~~~~~l--------------~~~~lv~hn~~fD~~~L~~~~~~~g~~~p~~~~~~~~iDt~~l~~~~~p~~-~~~L~ 149 (194)
T 2gui_A 85 VADEFMDYI--------------RGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGK-RNSLD 149 (194)
T ss_dssp HHHHHHHHH--------------TTSEEEETTHHHHHHHHHHHHHHTCSCCCCGGGTSEEEEHHHHHHHHSTTS-CCSHH
T ss_pred HHHHHHHHH--------------CCCeEEEEchHHhHHHHHHHHHHcCCCCccccccCceeeHHHHHHHHcCCC-CCCHH
Confidence 999999999 788999999999999998 23332 47899999988877754 57999
Q ss_pred HHHHHHhCCcCCC-CCCChHHHHHHHHHHHHHHHhchhh
Q 018586 273 YLTRTYLGYDIQS-GVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 273 ~l~~~~~~~~~~~-~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
.|++.| |++... .+|+|++||++|++||.++.+++..
T Consensus 150 ~l~~~~-gi~~~~~~~H~Al~Da~~ta~l~~~l~~~~~~ 187 (194)
T 2gui_A 150 ALCARY-EIDNSKRTLHGALLDAQILAEVYLAMTGGQTS 187 (194)
T ss_dssp HHHHHT-TCCCTTCSSCCHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHc-CcCCCCCCCCChHHHHHHHHHHHHHHHhccch
Confidence 999987 998665 4899999999999999999988654
No 4
>1w0h_A 3'-5' exonuclease ERI1; nuclease domain, hydrolase; HET: AMP; 1.59A {Homo sapiens} SCOP: c.55.3.5
Probab=99.95 E-value=4.2e-28 Score=211.24 Aligned_cols=168 Identities=17% Similarity=0.257 Sum_probs=136.0
Q ss_pred CCceeeccCccccccC------CCCccceeEEeeecCCCCeE--EeeeccCCC--CccccccccCCCCHhhhcCCCChHH
Q 018586 134 GPKAVAMDCEMVGGGS------NGTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKE 203 (353)
Q Consensus 134 ~~~~~~~D~Ettg~~~------~~~~~il~~v~ivd~~g~~~--~~~lv~P~~--~i~~~~~~~~GIt~e~l~~~~~~~~ 203 (353)
...++++|+||||+++ +.++|+ ++|.+...+|+++ |+.+|+|.. +++++++++||||+++|+++|++.+
T Consensus 9 ~~~~vviD~ETTGl~~~~~~~~~~Iiei-gav~~~~~~g~i~~~f~~lv~P~~~~~i~~~~~~i~GIt~~~l~~~~~~~~ 87 (204)
T 1w0h_A 9 YDYICIIDFEATCEEGNPPEFVHEIIEF-PVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQ 87 (204)
T ss_dssp SSEEEECCCEECCCTTCCTTSCCCEEEE-EEEEEETTTCSEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHHH
T ss_pred cCEEEEEEEecCCcCCCCCCCCCcEEEE-EEEEEECCCCEEeeeeeeEECCCCCCccCHHHHHHhCCCHHHHhCCCCHHH
Confidence 4569999999999864 456666 5555532478886 999999998 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHH-Hhc-------CcCCCC--ceeecccccCCcccC-CCCCcHH
Q 018586 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLR-------MNYPDH--MLRDTAKYRPLMKTN-LVSHSLK 272 (353)
Q Consensus 204 v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~-~l~-------~~~~~~--~~~Dt~~l~~~~~~~-~~~~~L~ 272 (353)
|+.+|.+|+.+... +..+.++||||+.||+. ||+ +..|.. .++||..+++.+++. ...++|.
T Consensus 88 v~~~~~~~l~~~~~-------~~~~~~lv~hn~~fD~~~~L~~~~~~~~~~~p~~~~~~~dt~~l~~~~~~~~~~~~~L~ 160 (204)
T 1w0h_A 88 VLKKVIDWMKLKEL-------GTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLT 160 (204)
T ss_dssp HHHHHHHHHHHTTB-------TTTBCEEEEESSTTTTHHHHHHHHHHHTCCCCGGGSEEEEHHHHHHHHHTCCGGGCSHH
T ss_pred HHHHHHHHHHhcCC-------CCCCcEEEEEECcchHHHHHHHHHHHhCCCCcccccceEEHHHHHHHHhCCCCccchHH
Confidence 99999999943210 01334699999999997 997 344543 789999998877664 2358999
Q ss_pred HHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchhh
Q 018586 273 YLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 273 ~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
.|++.| |++..+.+|+|++||++|++||.++.+++..
T Consensus 161 ~l~~~~-gi~~~~~~H~Al~Da~~ta~l~~~l~~~~~~ 197 (204)
T 1w0h_A 161 IMLEKL-GMDYDGRPHCGLDDSKNIARIAVRMLQDGCE 197 (204)
T ss_dssp HHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHc-CCCCCCCccCcHHHHHHHHHHHHHHHHCCCe
Confidence 999998 9996655899999999999999999988644
No 5
>3mxm_B Three prime repair exonuclease 1; RNAse H-like fold, polyproline type II helix, hydrolase-DNA; HET: DNA; 1.75A {Mus musculus} SCOP: c.55.3.5 PDB: 3mxj_B 2ioc_B 3mxi_B* 3b6o_A* 2o4g_A* 3b6p_A* 2o4i_A 2oa8_A
Probab=99.94 E-value=2.2e-27 Score=211.57 Aligned_cols=161 Identities=15% Similarity=0.124 Sum_probs=132.3
Q ss_pred CCceeeccCcccccc--CCCCccceeEEeeecCC--------C---------Ce--EEeeeccCCCCccccccccCCCCH
Q 018586 134 GPKAVAMDCEMVGGG--SNGTLDLCARVCLVDED--------E---------NV--IFHTYVQPQLPVTNYRYEVTGLTE 192 (353)
Q Consensus 134 ~~~~~~~D~Ettg~~--~~~~~~il~~v~ivd~~--------g---------~~--~~~~lv~P~~~i~~~~~~~~GIt~ 192 (353)
...|+++|+||||++ .++++|+ +.|.+.+.. | ++ .|+++|+|..+|++.++.+||||+
T Consensus 11 ~~~~vv~D~ETTGl~~~~d~IiEI-gav~v~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~li~P~~~i~~~~~~i~GIt~ 89 (242)
T 3mxm_B 11 MQTLIFLDLEATGLPSSRPEVTEL-CLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSK 89 (242)
T ss_dssp CSEEEEEEEEESSCGGGCCCEEEE-EEEEEEHHHHHTSCCCCSSSCCCCCCCSCCEEEEEECCCSSCCCHHHHHHHCCCH
T ss_pred cceEEEEEeecCCCCCCCCeeEEE-EEEEecCCcccccccccccccccccccchhheeEEEECCCCCCCHHHHHhcCCCH
Confidence 456999999999986 5678888 777775431 1 33 689999999999999999999999
Q ss_pred hhhcCC--CChH-HHHHHHHHHHhcCCCCcccccCCCCC----cEEEeccc-HHHHHHhc-------CcCC--CCceeec
Q 018586 193 EDIKNA--MPLK-EVKDKILEILNNGESTGRLMLDDGKA----RLLVGHGL-EHDLDSLR-------MNYP--DHMLRDT 255 (353)
Q Consensus 193 e~l~~~--~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~----~~lvgh~~-~~D~~~l~-------~~~~--~~~~~Dt 255 (353)
++|.++ |+|. +|+++|.+|+ ++ .+|||||+ .||+.||+ +..+ ...++||
T Consensus 90 ~~l~~~g~p~~~~ev~~~~~~fl--------------~~~~~~~~lVaHNav~FD~~fL~~~~~r~g~~~~~~~~~~iDt 155 (242)
T 3mxm_B 90 AELEVQGRQRFDDNLAILLRAFL--------------QRQPQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDS 155 (242)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHH--------------HTSCSSEEEEETTTTTTHHHHHHHHHHTSSSCCTTTTCEEEEH
T ss_pred HHHHhcCCCchhHHHHHHHHHHH--------------hcCCCCCEEEEcCChHhhHHHHHHHHHHcCCCCCccCCeEeeh
Confidence 999998 8997 9999999999 55 89999995 99999998 2222 2468999
Q ss_pred ccccCCcc--------cCCCCCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchhh
Q 018586 256 AKYRPLMK--------TNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 256 ~~l~~~~~--------~~~~~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
+.+++.+. +...+++|..|++.++|++.. ++|+|++||++|++||.++.+++..
T Consensus 156 l~l~r~l~~~~~p~~~~~~~~~~L~~l~~~~~gi~~~-~~H~Al~Da~ata~l~~~~~~~~~~ 217 (242)
T 3mxm_B 156 IAALKALEQASSPSGNGSRKSYSLGSIYTRLYWQAPT-DSHTAEGDDLTLLSICQWKPQALLQ 217 (242)
T ss_dssp HHHHHHHHHHHCC------CCCSHHHHHHHHHSSCCS-STTSHHHHHHHHHHHHTSSHHHHHH
T ss_pred HHHHHHHHhhcCccccCCCCCcCHHHHHHHHhCCCCC-CCcChHHHHHHHHHHHHHHHHHHHH
Confidence 99887554 346789999999885599954 5999999999999999999887655
No 6
>3cg7_A CRN-4, cell death-related nuclease 4; hydrolase, apoptosis, 3'-5' exonuclease, deddh; 2.50A {Caenorhabditis elegans} PDB: 3cm5_A 3cm6_A
Probab=99.94 E-value=2.3e-27 Score=218.46 Aligned_cols=196 Identities=16% Similarity=0.235 Sum_probs=152.6
Q ss_pred CCceeeccCccccccCC-----CCccceeEEeeecCCCCeE----EeeeccCCCC--ccccccccCCCCHhhhcCCCChH
Q 018586 134 GPKAVAMDCEMVGGGSN-----GTLDLCARVCLVDEDENVI----FHTYVQPQLP--VTNYRYEVTGLTEEDIKNAMPLK 202 (353)
Q Consensus 134 ~~~~~~~D~Ettg~~~~-----~~~~il~~v~ivd~~g~~~----~~~lv~P~~~--i~~~~~~~~GIt~e~l~~~~~~~ 202 (353)
-..++++|+||||++.. +++|+ ++|.+-..+|+++ |++||+|... |+++++++||||+++|+++|+|.
T Consensus 18 ~~~~vviD~ETTGl~~~~d~~~eIIEI-gaV~vd~~~g~i~~~~~f~~lV~P~~~p~i~~~~~~ltGIt~e~v~~ap~~~ 96 (308)
T 3cg7_A 18 FDTLLILDFETTSDAANQDYPCEVIQF-AIVAYDVPNDKIREDISFNKYVKPVLNRTLTKNCVDFTGIPQRSIDTADTFD 96 (308)
T ss_dssp CSEEEEEEEEECCBTTBCSCCCCEEEE-EEEEEETTTTEEEEEEEEEEECBCSSBCSCCHHHHHHHCCCHHHHHTSCBHH
T ss_pred CCeEEEEEeecCCCCCCCCCCCCeEEE-EEEEEEcCCCEEeeccceeeEECCCCCCCCCHHHHHHcCCCHHHHhcCCCHH
Confidence 34699999999998753 56666 5555422367763 8999999984 99999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcccccCCCCCcEEEeccc------HHHH-HHhc-------CcCCC--CceeecccccCCcccCC
Q 018586 203 EVKDKILEILNNGESTGRLMLDDGKARLLVGHGL------EHDL-DSLR-------MNYPD--HMLRDTAKYRPLMKTNL 266 (353)
Q Consensus 203 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~------~~D~-~~l~-------~~~~~--~~~~Dt~~l~~~~~~~~ 266 (353)
+|+++|.+|+ ++.++||||+ .||+ .||+ +..|. .+++||+.+++.+++..
T Consensus 97 evl~~f~~~l--------------~~~~lvahn~~lv~~g~fD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~~~~~~~~ 162 (308)
T 3cg7_A 97 VVYEQFQQWL--------------ITLGLEEGKFAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIFTNEMDRM 162 (308)
T ss_dssp HHHHHHHHHH--------------HHHCCCTTSEEEEESSSHHHHTHHHHHHHHTTCCCCGGGSEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--------------HhCCcCCcceEEeccCcccHHHHHHHHHHHcCCCCchhhcceeeHHHHHHHHhccc
Confidence 9999999999 7778899998 9999 6886 34453 46899999988776643
Q ss_pred C------CCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchhhhhhh-----cc---cCCCCCCCCcchh---
Q 018586 267 V------SHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQVEEI-----GN---QNTTGSFDSYKYK--- 329 (353)
Q Consensus 267 ~------~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~--- 329 (353)
. +++|..|++.+ |+++.+.+|+|++||++|++||.++.+++..+.-. .. ..+......|.+.
T Consensus 163 ~~~~~~~~~~L~~l~~~~-gi~~~~~~HrAl~DA~ata~l~~~l~~~~~~~~i~~~~~~s~~~~~~~~~~~~~w~~~~~~ 241 (308)
T 3cg7_A 163 GPKELSATTNIGKMNEYY-DLPTIGRAHDAMDDCLNIATILQRMINMGAKVTVNELLTCCASWRRQPLVYNKEWRSSFMD 241 (308)
T ss_dssp CCCCCCCCSHHHHHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTCCCCCCEEEESCCGGGSSCCCCCTTGGGCHHH
T ss_pred cccccccCcCHHHHHHHc-CCCCCCCCcCHHHHHHHHHHHHHHHHHcCCCCChHHHHhhcCCccccccccCcccccchHH
Confidence 3 68999999888 99976657999999999999999999875432111 00 1111334577755
Q ss_pred ---HHhhcChhhhhccCCC
Q 018586 330 ---ELEKMSPNELYQISKS 345 (353)
Q Consensus 330 ---~~~~~~~~~~~~~~~~ 345 (353)
.++++.|.++++.++.
T Consensus 242 ~~~~~~~~~p~~~~~~~~~ 260 (308)
T 3cg7_A 242 AGKIFERVLPLVVTTIRAG 260 (308)
T ss_dssp HHHHHHHHSSCEEEECCGG
T ss_pred HHHHHHHhcccceeeeecc
Confidence 8899999999988763
No 7
>1zbh_A 3'-5' exonuclease ERI1; histone mRNA 3'-END-specific recognition, structures of 3'- exonuclease and ITS RNA complex, hydrolase/RNA complex; HET: AMP; 3.00A {Homo sapiens}
Probab=99.94 E-value=9.1e-27 Score=214.09 Aligned_cols=168 Identities=16% Similarity=0.248 Sum_probs=134.9
Q ss_pred CCCceeeccCcccccc------CCCCccceeEEeeecCCCCeE--EeeeccCCC--CccccccccCCCCHhhhcCCCChH
Q 018586 133 RGPKAVAMDCEMVGGG------SNGTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLK 202 (353)
Q Consensus 133 ~~~~~~~~D~Ettg~~------~~~~~~il~~v~ivd~~g~~~--~~~lv~P~~--~i~~~~~~~~GIt~e~l~~~~~~~ 202 (353)
....|+++|+||||++ .+.++++ ++|.+...+|+++ |+++|+|.. +|+++++.+||||+++|+++|+|.
T Consensus 76 ~~~~~vviD~ETTGl~~~~~~~~~~IIeI-gaV~v~~~~g~i~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~v~~ap~~~ 154 (299)
T 1zbh_A 76 YYDYICIIDFEATCEEGNPPEFVHEIIEF-PVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFP 154 (299)
T ss_dssp SCSEEEEECCEECCCTTCCTTCCCCEEEE-EEEEEETTTCCEEEEEEEEBCCSSSCSCCHHHHHHHCCCHHHHHTSBCHH
T ss_pred CCceEEEEEeecccCCCCCCCCCCceEEE-EEEEEECCCCeEeeeeeeeecCCCCCCCCHHHHHHhCCCHHHHhcCCCHH
Confidence 3567899999999985 3567777 6666654467875 999999998 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHH-Hhc-------CcCCC--CceeecccccCCcccCC-CCCcH
Q 018586 203 EVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLR-------MNYPD--HMLRDTAKYRPLMKTNL-VSHSL 271 (353)
Q Consensus 203 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~-~l~-------~~~~~--~~~~Dt~~l~~~~~~~~-~~~~L 271 (353)
+|+.+|.+|+....- +..+.++||||+.||+. ||+ +..|. ..++|+..+++.+++.. ..++|
T Consensus 155 evl~~f~~~l~~~~~-------~~~~~~lVahn~~fD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~~~~~~~~~~~~~L 227 (299)
T 1zbh_A 155 QVLKKVIDLMKLKEL-------GTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKL 227 (299)
T ss_dssp HHHHHHHHHHHHTTB-------TTTBCEEEEESSSHHHHTHHHHHHHHTTBCCCGGGSEEEEHHHHHHHHHTCCGGGCSH
T ss_pred HHHHHHHHHHhhccc-------CCCCcEEEEEeCHHHHHHHHHHHHHHcCCCCCcccchHHHHHHHHHHHhCCCCCCccH
Confidence 999999999932210 01225999999999999 997 33443 36899988776654422 24899
Q ss_pred HHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchh
Q 018586 272 KYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDH 309 (353)
Q Consensus 272 ~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~ 309 (353)
..|+++| |++..+.+|+|++||++|++||.++.+++.
T Consensus 228 ~~l~~~~-gi~~~g~~H~Al~DA~ata~l~~~l~~~~~ 264 (299)
T 1zbh_A 228 TIMLEKL-GMDYDGRPNCGLDDSKNIARIAVRMLQDGC 264 (299)
T ss_dssp HHHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHc-CCCCCCCCCChHHHHHHHHHHHHHHHHhCC
Confidence 9999988 999665589999999999999999998754
No 8
>2xri_A ERI1 exoribonuclease 3; hydrolase, metal binding; 2.15A {Homo sapiens}
Probab=99.93 E-value=7.7e-27 Score=206.03 Aligned_cols=157 Identities=17% Similarity=0.261 Sum_probs=128.9
Q ss_pred CceeeccCccccccCC----CCccceeEEeeecCCCCeE--EeeeccCCC--CccccccccCCCCHhhhcCCCChHHHHH
Q 018586 135 PKAVAMDCEMVGGGSN----GTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKEVKD 206 (353)
Q Consensus 135 ~~~~~~D~Ettg~~~~----~~~~il~~v~ivd~~g~~~--~~~lv~P~~--~i~~~~~~~~GIt~e~l~~~~~~~~v~~ 206 (353)
..++++|+||||+++. +++|+ ++|.+.+..|+++ |+.+|+|.. +|+++++++||||+++|+++|++.+|++
T Consensus 31 ~~~vviD~ETTGl~~~~d~~~IieI-gav~v~~~~~~i~~~f~~lV~P~~~~~i~~~~~~ltGIt~~~v~~a~~~~~v~~ 109 (224)
T 2xri_A 31 HYFLVLDFEATCDKPQIHPQEIIEF-PILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQAMVDGQPSLQQVLE 109 (224)
T ss_dssp SEEEEECCEECCCC-CCSSCCEEEE-EEEEEETTTCCEEEEEEEECCCSSSCSCCHHHHHHHCCCHHHHTTCCCHHHHHH
T ss_pred CeEEEEEEEcCCCCCCCCCcceEEE-EEEEEecCCcEEeeeeeeEECCCCCCcCCHHHHHHhCcCHHHHcCCCCHHHHHH
Confidence 5699999999998743 56677 6776654456775 999999997 8999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcccccCCCCCcEEEeccc--------HHHHHH-hc-------CcCCC--Cceeecc---cccCCcccC
Q 018586 207 KILEILNNGESTGRLMLDDGKARLLVGHGL--------EHDLDS-LR-------MNYPD--HMLRDTA---KYRPLMKTN 265 (353)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~--------~~D~~~-l~-------~~~~~--~~~~Dt~---~l~~~~~~~ 265 (353)
+|.+|+ ++.+|||||+ .||+.| |+ +..|. ..++|+. .+++...
T Consensus 110 ~f~~~l--------------~~~~lv~hn~~~~~~t~g~fD~~fll~~~~~~~g~~~p~~~~~~iD~~~~~~~~~~~~-- 173 (224)
T 2xri_A 110 RVDEWM--------------AKEGLLDPNVKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCW-- 173 (224)
T ss_dssp HHHHHH--------------HHTTTTSTTSCEEEEESSSHHHHTHHHHHHHHHTCCCCGGGSCEEEHHHHHHHHHTSC--
T ss_pred HHHHHH--------------hhcccccCCCceEEEEeChhhHHHHHHHHHHHhCCCCcccccceEeHHHHHHHHhccC--
Confidence 999999 7778999999 999997 74 34443 3689944 4444333
Q ss_pred CCCCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchhh
Q 018586 266 LVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 266 ~~~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
..++|..|++.+ |++..+.+|+|++||++|++||.++.+++..
T Consensus 174 -p~~~L~~l~~~~-gi~~~~~~H~Al~DA~~ta~l~~~l~~~g~~ 216 (224)
T 2xri_A 174 -PKNGLLDMNKGL-SLQHIGRPHSGIDDCKNIANIMKTLAYRGFI 216 (224)
T ss_dssp -CTTTHHHHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred -CCCCHHHHHHHc-CCCCCCCCcChHHHHHHHHHHHHHHHHcCCE
Confidence 348999999988 9986556899999999999999999987644
No 9
>3u3y_B Three prime repair exonuclease 1; RNAse H fold, 3' exonuclease, homodimer, hydrolase-DNA compl; HET: BU1; 2.28A {Mus musculus} PDB: 3u6f_B*
Probab=99.93 E-value=2.5e-26 Score=209.84 Aligned_cols=165 Identities=13% Similarity=0.111 Sum_probs=130.9
Q ss_pred CCceeeccCcccccc--CCCCccceeEEeeecCC--------C---------C--eEEeeeccCCCCccccccccCCCCH
Q 018586 134 GPKAVAMDCEMVGGG--SNGTLDLCARVCLVDED--------E---------N--VIFHTYVQPQLPVTNYRYEVTGLTE 192 (353)
Q Consensus 134 ~~~~~~~D~Ettg~~--~~~~~~il~~v~ivd~~--------g---------~--~~~~~lv~P~~~i~~~~~~~~GIt~ 192 (353)
...|+++|+||||++ .++++|+ +.|.+.+.. | + ..|+++|+|..+|++.+++|||||+
T Consensus 11 ~~tfVv~DlETTGL~~~~d~IIEI-gaV~v~~~~l~~~~~~~g~~~~~~~~~~v~~~~~~lI~P~~~I~~~a~~IhGIT~ 89 (314)
T 3u3y_B 11 MQTLIFLDLEATGLPSSRPEVTEL-CLLAVHRRALENTSISQGHPPPVPRPPRVVDKLSLCIAPGKACSPGASEITGLSK 89 (314)
T ss_dssp CSEEEEEEEEESSCGGGCCCEEEE-EEEEEEHHHHHC--CCCSSSCCCCCCCSSCEEEEEECBCSSCCCHHHHHHHSCCH
T ss_pred cCCEEEEEEECCCCCCCCCeEEEE-EEEEEECCccccccccccccccccccceeeeeEEEEECCCCCCCHHHHHhcCCCH
Confidence 456999999999986 5678888 677775331 1 2 2589999999999999999999999
Q ss_pred hhhcCC--CCh-HHHHHHHHHHHhcCCCCcccccCCCCCcEEEecc-cHHHHHHhc-------CcCC--CCceeeccc--
Q 018586 193 EDIKNA--MPL-KEVKDKILEILNNGESTGRLMLDDGKARLLVGHG-LEHDLDSLR-------MNYP--DHMLRDTAK-- 257 (353)
Q Consensus 193 e~l~~~--~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~-~~~D~~~l~-------~~~~--~~~~~Dt~~-- 257 (353)
++|+++ |+| ++|+++|.+|+... +...+||||| +.||+.||+ +..+ ...++||+.
T Consensus 90 e~l~~aG~P~f~~ev~~~l~~fL~~~----------~~~~vLVAHNga~FD~~FL~~el~r~Gl~~~~~~~~~iDTL~l~ 159 (314)
T 3u3y_B 90 AELEVQGRQRFDDNLAILLRAFLQRQ----------PQPCCLVAHNGDRYDFPLLQTELARLSTPSPLDGTFCVDSIAAL 159 (314)
T ss_dssp HHHHHTTCCBSCHHHHHHHHHHHHTS----------CSSEEEEETTTTTTHHHHHHHHHHTSSSCCTTTTCEEEEHHHHH
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHhcC----------CCCcEEEEeCcHHHHHHHHHHHHHHcCCCCCCCCceEEeHHHHH
Confidence 999999 899 79999999999211 0228999999 999999998 2232 245789987
Q ss_pred --ccCCcccC----CCCCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchhh
Q 018586 258 --YRPLMKTN----LVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 258 --l~~~~~~~----~~~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
+.+..+|. ..+|+|.+|+++|+|++. .++|+|++||++|++||.++.+++..
T Consensus 160 r~L~r~~~P~~~~~~~~~~L~~L~~~l~gi~~-~~aHrAl~DA~ata~lf~~l~~~~l~ 217 (314)
T 3u3y_B 160 KALEQASSPSGNGSRKSYSLGSIYTRLYWQAP-TDSHTAEGHVLTLLSICQWKPQALLQ 217 (314)
T ss_dssp HHHHTTC-------CCCCSHHHHHHHHHSSCC-SCSSSHHHHHHHHHHHHHSSHHHHHH
T ss_pred HHHHHHhCccccccCCCCCHHHHHHHhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44455554 478999999999559995 46999999999999999998887654
No 10
>1y97_A Three prime repair exonuclease 2; TREX2, hydrolase; 2.50A {Homo sapiens} SCOP: c.55.3.5
Probab=99.93 E-value=7.9e-26 Score=201.52 Aligned_cols=166 Identities=19% Similarity=0.179 Sum_probs=129.0
Q ss_pred CCCceeeccCcccccc--CCCCccceeEEeeecC--------------CCCe--EEeeeccCCCCccccccccCCCCHhh
Q 018586 133 RGPKAVAMDCEMVGGG--SNGTLDLCARVCLVDE--------------DENV--IFHTYVQPQLPVTNYRYEVTGLTEED 194 (353)
Q Consensus 133 ~~~~~~~~D~Ettg~~--~~~~~~il~~v~ivd~--------------~g~~--~~~~lv~P~~~i~~~~~~~~GIt~e~ 194 (353)
....++++|+||||++ .++++|+ +.|.+.+. .+++ .|+.+|+|..+|++.++++||||+++
T Consensus 8 ~~~~~v~iD~ETTGl~~~~~~IieI-g~v~~~~~~~~~~~~~~~~~~~~~~i~~~f~~lv~P~~~i~~~~~~i~GIt~~~ 86 (238)
T 1y97_A 8 RAETFVFLDLEATGLPSVEPEIAEL-SLFAVHRSSLENPEHDESGALVLPRVLDKLTLCMCPERPFTAKASEITGLSSEG 86 (238)
T ss_dssp CCSEEEEEEEEESSCGGGCCCEEEE-EEEEEEHHHHTSCBC---CCCBCCSSCEEEEEECCCSSCCCHHHHHHHCCCHHH
T ss_pred ccCeEEEEEeeCCCcCCCCCcEEEE-EEEEecccccccccccccccccccccceeeEEEECCCCcCCHHHHHHhCCCHHH
Confidence 4457999999999986 3567777 66666432 1244 49999999999999999999999999
Q ss_pred h--cCCCCh-HHHHHHHHHHHhcCCCCcccccCCCCCcEEEeccc-HHHHHHhc-------CcCCC-CceeecccccCCc
Q 018586 195 I--KNAMPL-KEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-------MNYPD-HMLRDTAKYRPLM 262 (353)
Q Consensus 195 l--~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-------~~~~~-~~~~Dt~~l~~~~ 262 (353)
| .++|+| ++|.+.|.+|+... .++.+|||||+ .||+.||+ +.+|. ..++||+.+++.+
T Consensus 87 l~~~~~p~f~~~v~~~l~~fl~~~----------~~~~~lVahN~~~FD~~fL~~~~~~~g~~~~~~~~~iDt~~l~~~~ 156 (238)
T 1y97_A 87 LARCRKAGFDGAVVRTLQAFLSRQ----------AGPICLVAHNGFDYDFPLLCAELRRLGARLPRDTVCLDTLPALRGL 156 (238)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHTTS----------CSSEEEEETTTTTTHHHHHHHHHHHHTCCCCTTCEEEEHHHHHHHH
T ss_pred HhhcCCCccHHHHHHHHHHHHHhC----------CCCCEEEecCchhhhHHHHHHHHHHcCCCCCCCCEEEEHHHHHHHH
Confidence 9 578999 49999999999211 02389999999 99999998 33342 5689999998887
Q ss_pred c---------cCCCCCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchhh
Q 018586 263 K---------TNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 263 ~---------~~~~~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
. |...+++|..|++.++|++. .++|+|++||++|++||.++.+++..
T Consensus 157 ~~~~~p~~~~p~~~~~~L~~l~~~~~gi~~-~~~H~Al~Da~~ta~l~~~l~~~~~~ 212 (238)
T 1y97_A 157 DRAHSHGTRARGRQGYSLGSLFHRYFRAEP-SAAHSAEGDVHTLLLIFLHRAAELLA 212 (238)
T ss_dssp HHHC----------CCSHHHHHHHHHSSCC-C---CHHHHHHHHHHHHHHTHHHHHH
T ss_pred HhccCccccCCCCCCCCHHHHHHHHhCCCC-ccCccHHHHHHHHHHHHHHHHHHHHH
Confidence 6 55678999999996449884 45999999999999999999887654
No 11
>1zbu_A ERI-1 homolog, 3'-5' exonuclease ERI1; hydrolase; HET: AMP; 3.00A {Homo sapiens}
Probab=99.93 E-value=2.1e-26 Score=214.95 Aligned_cols=168 Identities=17% Similarity=0.258 Sum_probs=135.4
Q ss_pred CCCceeeccCcccccc------CCCCccceeEEeeecCCCCeE--EeeeccCCC--CccccccccCCCCHhhhcCCCChH
Q 018586 133 RGPKAVAMDCEMVGGG------SNGTLDLCARVCLVDEDENVI--FHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLK 202 (353)
Q Consensus 133 ~~~~~~~~D~Ettg~~------~~~~~~il~~v~ivd~~g~~~--~~~lv~P~~--~i~~~~~~~~GIt~e~l~~~~~~~ 202 (353)
....|+++|+||||++ .+.++++ ++|.+.+.+|+++ |++||+|.. +|+++++.+||||+++|+++++|.
T Consensus 126 ~~~~~vviD~ETTGl~~~~~~~~deIIEI-gaV~vd~~~g~i~~~f~~lVkP~~~~~I~~~~t~ihGIT~e~v~~ap~~~ 204 (349)
T 1zbu_A 126 YYDYICIIDFEATCEEGNPPEFVHEIIEF-PVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFP 204 (349)
T ss_dssp CCSEEEECCCEECCCTTCCTTCCCCEEEC-CEEEEETTTTEEEEEECCBEECSSSCSCCHHHHHHHCCCHHHHHTSEEHH
T ss_pred cCCeEEEEEEecCCCCCcCCCCCCeEEEE-EEEEEECCCceEeEEEEEEECCCCCCCCCHHHHHHhCCCHHHHhCCCCHH
Confidence 3467899999999984 3567777 6777754467775 999999998 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHH-Hhc-------CcCCC--CceeecccccCCcccCC-CCCcH
Q 018586 203 EVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLD-SLR-------MNYPD--HMLRDTAKYRPLMKTNL-VSHSL 271 (353)
Q Consensus 203 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~-~l~-------~~~~~--~~~~Dt~~l~~~~~~~~-~~~~L 271 (353)
+|+.+|.+|+....- +....+|||||+.||+. ||+ +..|. ..++|+..+++.+++.. ..++|
T Consensus 205 eVl~~f~~~l~~~~~-------~~~~~~lVaHNa~FD~~~fL~~~~~~~g~~~p~~~~~~iDt~~l~~~~~~~~~~~~~L 277 (349)
T 1zbu_A 205 QVLKKVIDLMKLKEL-------GTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKL 277 (349)
T ss_dssp HHHHHHHHHHHHTTB-------TTTBCEEEEESSSHHHHTHHHHHHHHTTBCCCGGGSEEEEHHHHHHHHHTCCGGGGSH
T ss_pred HHHHHHHHHHhcccc-------cCCCcEEEEECcHhhHHHHHHHHHHHhCCCCccccchHHHHHHHHHHHhcCCCCCCCH
Confidence 999999999943210 01125999999999999 997 33443 36899988876654322 24899
Q ss_pred HHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchh
Q 018586 272 KYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDH 309 (353)
Q Consensus 272 ~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~ 309 (353)
..|+++| |+++.+.+|+|++||++|++||.++.+++.
T Consensus 278 ~~l~~~~-gi~~~g~~HrAl~DA~ata~ll~~ll~~~~ 314 (349)
T 1zbu_A 278 TIMLEKL-GMDYDGRPHCGLDDSKNIARIAVRMLQDGC 314 (349)
T ss_dssp HHHHHHT-TCCCCSCTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHc-CCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999988 999665689999999999999999998754
No 12
>2f96_A Ribonuclease T; RNAse, RNT, RNAse T, tRNA hydrolase, SAD, PS protein structure initiative, midwest center for structural genomics; 2.09A {Pseudomonas aeruginosa} SCOP: c.55.3.5
Probab=99.93 E-value=2.9e-26 Score=202.47 Aligned_cols=172 Identities=20% Similarity=0.229 Sum_probs=134.7
Q ss_pred cCCCceeeccCccccccC--CCCccceeEEeeec-CCCCe----EEeeeccC--CCCccccccccCCCCHhh-hcCCCCh
Q 018586 132 CRGPKAVAMDCEMVGGGS--NGTLDLCARVCLVD-EDENV----IFHTYVQP--QLPVTNYRYEVTGLTEED-IKNAMPL 201 (353)
Q Consensus 132 ~~~~~~~~~D~Ettg~~~--~~~~~il~~v~ivd-~~g~~----~~~~lv~P--~~~i~~~~~~~~GIt~e~-l~~~~~~ 201 (353)
.....++++|+||||+++ +.++++ +.|.+.. .+|++ .|+.+|+| ..+|++.++++||||+++ +++++++
T Consensus 26 ~~~~~~vviD~ETTGl~~~~~~IieI-g~v~~~~~~~g~i~~~~~f~~lV~P~~~~~i~~~~~~ihGIt~e~~v~~~~~~ 104 (224)
T 2f96_A 26 FRGYLPVVVDVETGGFNSATDALLEI-AATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFTGIKLDHPLRMAVQE 104 (224)
T ss_dssp TTTEEEEEEEEEESSSCTTTBCEEEE-EEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHTCCTTCTTCCCBCH
T ss_pred ccCCcEEEEEeeCCCCCCCCCeeEEE-EEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCH
Confidence 345579999999999874 456666 6666631 26764 48999999 579999999999999974 8999999
Q ss_pred HHHHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhcC-----cC---C--CCceeecccccCCcccCCCCCcH
Q 018586 202 KEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM-----NY---P--DHMLRDTAKYRPLMKTNLVSHSL 271 (353)
Q Consensus 202 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~-----~~---~--~~~~~Dt~~l~~~~~~~~~~~~L 271 (353)
.+|+.+|.+||.+.- ...+.++.+|||||+.||+.||+. .. | ...++||+.+++.+++ +++|
T Consensus 105 ~~v~~~~~~~l~~~~-----~~~~~~~~~lV~hn~~FD~~fL~~~~~~~g~~~~p~~~~~~iDt~~l~~~~~~---~~~L 176 (224)
T 2f96_A 105 EAALTEIFRGIRKAL-----KANGCKRAILVGHNSSFDLGFLNAAVARTGIKRNPFHPFSSFDTATLAGLAYG---QTVL 176 (224)
T ss_dssp HHHHHHHHHHHHHHH-----HHTTCSEEEEEETTHHHHHHHHHHHHHHHTCCCCCEEEEEEEEHHHHHHHHHS---CCSH
T ss_pred HHHHHHHHHHHHHHh-----hhcccCCCEEEEeChhhhHHHHHHHHHHcCCCcCCccccceeeHHHHHHHHcC---CCCH
Confidence 999999999983100 000013689999999999999981 22 2 2468999999987765 4699
Q ss_pred HHHHHHHhCCcCCC-CCCChHHHHHHHHHHHHHHHhchhhhhh
Q 018586 272 KYLTRTYLGYDIQS-GVHDPYEDCVSVMRLYKRFRRQDHQVEE 313 (353)
Q Consensus 272 ~~l~~~~~~~~~~~-~~H~Al~Da~~t~~l~~~~~~~~~~~~~ 313 (353)
..|++.+ |+++.. .+|+|++||++|++||.++.+++.++..
T Consensus 177 ~~l~~~~-gi~~~~~~~H~Al~Da~~ta~l~~~l~~~~~~~~~ 218 (224)
T 2f96_A 177 AKACQAA-GMEFDNREAHSARYDTEKTAELFCGIVNRWKEMGG 218 (224)
T ss_dssp HHHHHHT-TCCCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHc-CCCcCCCCCCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999988 998654 5999999999999999999999877443
No 13
>2igi_A Oligoribonuclease; RNAse, exoribonuclease, exonuclease, hydrolase, mRNA decay; 1.70A {Escherichia coli} SCOP: c.55.3.5 PDB: 1yta_A 1j9a_A
Probab=99.91 E-value=1.9e-25 Score=190.64 Aligned_cols=153 Identities=18% Similarity=0.218 Sum_probs=115.3
Q ss_pred CCceeeccCccccccC--CCCccceeEEeeecCCCCeE---EeeeccCCCCcccc----c---cccCCCCHhhhcCCCCh
Q 018586 134 GPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI---FHTYVQPQLPVTNY----R---YEVTGLTEEDIKNAMPL 201 (353)
Q Consensus 134 ~~~~~~~D~Ettg~~~--~~~~~il~~v~ivd~~g~~~---~~~lv~P~~~i~~~----~---~~~~GIt~e~l~~~~~~ 201 (353)
..+++++|+||||+++ ++++|+ ++| +++.+|+++ |+.+|+|..++++. + +.+||||+++|+++|++
T Consensus 4 ~~~~v~iD~ETTGl~~~~~~IieI-g~v-~~~~~~~~~~~~~~~lv~P~~~i~~~i~~~~~~~~~itGIt~~~l~~~~~~ 81 (180)
T 2igi_A 4 ENNLIWIDLEMTGLDPERDRIIEI-ATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGD 81 (180)
T ss_dssp GGCEEEEEEEESSSCTTTCCEEEE-EEE-EECTTCCEEEEEEEEECCCCHHHHTTCCHHHHHHHHHTTHHHHHHHCCCCH
T ss_pred CCcEEEEEeeCCCCCCCCCceEEE-EEE-EEcCCCcEecCCcceEECCCHHHhhcCCHHHHHHHHHcCCCHHHHhcCCCH
Confidence 3569999999999874 456666 666 556677764 89999999876554 3 55699999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhcCcCC------CCceee--cc-cccCCcccCCCCCcHH
Q 018586 202 KEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP------DHMLRD--TA-KYRPLMKTNLVSHSLK 272 (353)
Q Consensus 202 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~------~~~~~D--t~-~l~~~~~~~~~~~~L~ 272 (353)
++|+++|.+|+.... .++..+|||||+.||+.||+..++ ..+++| |+ .+++.+.|.. .
T Consensus 82 ~~v~~~~~~~l~~~~--------~~~~~~lv~hn~~fD~~fL~~~~~~~~~~~~~~~~d~~tl~~l~~~~~p~~-----~ 148 (180)
T 2igi_A 82 REAELATLEFLKQWV--------PAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEI-----L 148 (180)
T ss_dssp HHHHHHHHHHHTTTS--------CTTTSCEEESSHHHHHHHHHHHCHHHHHHSCSCEEETHHHHHHHHHHCGGG-----G
T ss_pred HHHHHHHHHHHHHhC--------CCCCceEEecCHHHHHHHHHHHHHHhccCCCcceeeHHHHHHHHHHhChHh-----h
Confidence 999999999992110 011379999999999999994332 245788 65 3555554431 0
Q ss_pred HHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhch
Q 018586 273 YLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 308 (353)
Q Consensus 273 ~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~ 308 (353)
. |++ ..++|+|++||++|++||+++++.+
T Consensus 149 -----~-~i~-~~~~H~Al~Da~ata~l~~~~~~~~ 177 (180)
T 2igi_A 149 -----D-GFT-KQGTHQAMDDIRESVAELAYYREHF 177 (180)
T ss_dssp -----G-GSC-CCCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred -----h-CCC-CcCCcCcHHHHHHHHHHHHHHHHHh
Confidence 2 565 4559999999999999999998764
No 14
>3v9w_A Ribonuclease T; DEDD nucleases family, EXO-nucleases, hydrolase-DNA complex; HET: DNA; 1.70A {Escherichia coli} PDB: 3ngy_A 3v9u_A* 3ngz_A* 3va3_A* 3v9z_A* 3nh0_A 3nh2_A 3nh1_A* 3v9s_A* 3v9x_A* 3va0_A* 2is3_A
Probab=99.90 E-value=2.9e-24 Score=191.04 Aligned_cols=169 Identities=21% Similarity=0.250 Sum_probs=134.4
Q ss_pred cCCCceeeccCccccccC--CCCccceeEEeee-cCCCCe----EEeeeccC--CCCccccccccCCCCHh-hhcCCCCh
Q 018586 132 CRGPKAVAMDCEMVGGGS--NGTLDLCARVCLV-DEDENV----IFHTYVQP--QLPVTNYRYEVTGLTEE-DIKNAMPL 201 (353)
Q Consensus 132 ~~~~~~~~~D~Ettg~~~--~~~~~il~~v~iv-d~~g~~----~~~~lv~P--~~~i~~~~~~~~GIt~e-~l~~~~~~ 201 (353)
.....++++|+||||+++ +.++++ +.+.+. +.+|.+ .|+.+|+| ..+|++.++.+||||++ ++.+++++
T Consensus 34 l~~~~~vviD~ETTGl~~~~~~IieI-gav~~~~~~~g~i~~~~~f~~~v~P~~~~~i~~~~~~i~GIt~e~~v~~~~~~ 112 (235)
T 3v9w_A 34 FRGFYPVVIDVETAGFNAKTDALLEI-AAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSG 112 (235)
T ss_dssp TTTEEEEEEEEEESSSCTTTBCEEEE-EEEEEEECTTSCEEEEEEEEEEBCCCTTCBCCHHHHHHHCCCTTCGGGCCBCH
T ss_pred ccCCcEEEEEEeCCCCCCCCCeEEEE-EEEEEEEcCCCcccccceEEEEECCCCCCCCCHHHHHHhCCCHHHHHhcCCCH
Confidence 445579999999999863 456666 566652 236764 48999999 57899999999999999 99999999
Q ss_pred HHHHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhc-----CcC---CC--CceeecccccCCcccCCCCCcH
Q 018586 202 KEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-----MNY---PD--HMLRDTAKYRPLMKTNLVSHSL 271 (353)
Q Consensus 202 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-----~~~---~~--~~~~Dt~~l~~~~~~~~~~~~L 271 (353)
.+|+.+|.+|+.+.-. ..+.++.++||||+.||+.||+ ... |. ..++||+.+++.++| .++|
T Consensus 113 ~~vl~~~~~~l~~~~~-----~~~~~~~~lVahN~~fD~~~L~~~~~~~g~~~~p~~~~~~~Dt~~la~~~~p---~~~L 184 (235)
T 3v9w_A 113 YEALHEIFKVVRKGIK-----ASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALG---QTVL 184 (235)
T ss_dssp HHHHHHHHHHHHHHHT-----TTTCCEEEEEETTTHHHHHHHHHHHHHTTCCCCCEEEEEEEEHHHHHHHHHS---CCSH
T ss_pred HHHHHHHHHHHHHHhh-----hccCCCcEEEEeChHHHHHHHHHHHHHcCCCCCCCCCCcEEEhHHHHHHHhC---CCCH
Confidence 9999999999932000 0000468999999999999997 223 22 458999999988876 3799
Q ss_pred HHHHHHHhCCcCCC-CCCChHHHHHHHHHHHHHHHhchhh
Q 018586 272 KYLTRTYLGYDIQS-GVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 272 ~~l~~~~~~~~~~~-~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
+.|++.| |+++.. .+|+|++||.+|++||.++.+++.+
T Consensus 185 ~~l~~~~-gi~~~~~~~H~Al~DA~~ta~l~~~l~~~l~~ 223 (235)
T 3v9w_A 185 SKACQTA-GMDFDSTQAHSALYDTERTAVLFCEIVNRWKR 223 (235)
T ss_dssp HHHHHHH-TCCCCTTTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCCCCCCCCcChHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 998764 5999999999999999999998765
No 15
>3tr8_A Oligoribonuclease; transcription, hydrolase; 2.50A {Coxiella burnetii}
Probab=99.90 E-value=8.4e-25 Score=186.31 Aligned_cols=156 Identities=15% Similarity=0.187 Sum_probs=119.0
Q ss_pred ccCCCceeeccCcccccc--CCCCccceeEEeeecCCCCeE---Eeeecc-CCC---Ccccc---ccccCCCCHhhhcCC
Q 018586 131 TCRGPKAVAMDCEMVGGG--SNGTLDLCARVCLVDEDENVI---FHTYVQ-PQL---PVTNY---RYEVTGLTEEDIKNA 198 (353)
Q Consensus 131 ~~~~~~~~~~D~Ettg~~--~~~~~~il~~v~ivd~~g~~~---~~~lv~-P~~---~i~~~---~~~~~GIt~e~l~~~ 198 (353)
.+...+++++|+||||++ .++++|+ |+| ++|.++.++ +..+|+ |.. .+++. ...+||||+++++++
T Consensus 5 ~~~~~~~v~~D~ETTGL~p~~d~IiEI-gaV-~~d~~~~i~~~~~~~~i~~p~~~l~~~~~~~~~ih~ltGIt~~~l~~~ 82 (186)
T 3tr8_A 5 DFSDDNLIWLDLEMTGLDPERDRIIEI-ATI-VTNSHLDILAEGPAFAIHQPDKLLTAMDNWNTSHHTASGLLERVKNSS 82 (186)
T ss_dssp CCCTTCEEEEEEEESSSCTTTCCEEEE-EEE-EECTTCCEEEECCCEECCCCHHHHTTSCHHHHHHHHHTSHHHHHHTCC
T ss_pred cCCCCcEEEEEEECCCCCCCCCceEEE-EEE-EEcCCeEEeeeeEEEEEeCCccccccCCcccHHHHhccCCCHHHHhcC
Confidence 345678999999999987 4567777 677 766666654 455685 542 23444 445679999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhcCcCC------CCceee--ccc-ccCCcccCCCCC
Q 018586 199 MPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP------DHMLRD--TAK-YRPLMKTNLVSH 269 (353)
Q Consensus 199 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~------~~~~~D--t~~-l~~~~~~~~~~~ 269 (353)
|++++|+++|++|+.... ..++.+|||||+.||+.||+..++ .++++| |.. |++.++|...
T Consensus 83 p~~~ev~~~~l~fl~~~~--------~~~~~~lvghn~~FD~~FL~~~~~~~~~~~~~~~iDvsTl~elar~~~P~~~-- 152 (186)
T 3tr8_A 83 VDEVEAETLTLAFLEKYV--------SAGKSPLCGNSVCQDRRFLSRYMPRLNQFFHYRHLDVTTLKILAQRWAPQIA-- 152 (186)
T ss_dssp CCHHHHHHHHHHHHTTTS--------CTTCSCEEESSTHHHHHHHHHHCHHHHHHSCSCEEEHHHHHHHHHHHCHHHH--
T ss_pred CCHHHHHHHHHHHHHHhc--------cCCCcEEEEEcHHHhHHHHHHHHHHcCCCCCCcEEeHHHHHHHHHHHCcccc--
Confidence 999999999999994322 126789999999999999993332 256899 886 8888877521
Q ss_pred cHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhch
Q 018586 270 SLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 308 (353)
Q Consensus 270 ~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~ 308 (353)
. |++ ..++|+|++||++|.++++.+++.+
T Consensus 153 ---~------~~~-~~~~HrAl~Da~ati~~l~~y~~~~ 181 (186)
T 3tr8_A 153 ---A------AHI-KESQHLALQDIRDSIEELRYYRAHL 181 (186)
T ss_dssp ---T------TSC-CCCCSCHHHHHHHHHHHHHHHHHHT
T ss_pred ---c------cCC-CCCCcChHHHHHHHHHHHHHHHHHh
Confidence 1 556 4569999999999999999999875
No 16
>2gbz_A Oligoribonuclease; ORN, deddh, structural genomics, hydrolase; 2.30A {Xanthomonas campestris PV}
Probab=99.90 E-value=3.5e-24 Score=184.77 Aligned_cols=148 Identities=16% Similarity=0.289 Sum_probs=112.5
Q ss_pred CCCceeeccCccccccC--CCCccceeEEeeecCCCCeE---EeeeccCCCCc----ccccc---ccCCCCHhhhcCCCC
Q 018586 133 RGPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI---FHTYVQPQLPV----TNYRY---EVTGLTEEDIKNAMP 200 (353)
Q Consensus 133 ~~~~~~~~D~Ettg~~~--~~~~~il~~v~ivd~~g~~~---~~~lv~P~~~i----~~~~~---~~~GIt~e~l~~~~~ 200 (353)
...+++++|+||||+++ ++++|+ +.|. .+.++.++ |+.+|+|..++ +++.+ .+||||+++|+++|+
T Consensus 7 ~~~~~vviD~ETTGl~p~~d~IieI-gav~-~~~~~~~~~~~~~~~v~p~~~i~~~~~~~~~~~~~itGIt~~~l~~~p~ 84 (194)
T 2gbz_A 7 GNDRLIWIDLEMTGLDTDRDSIIEI-ATIV-TDAQLNVLAEGPELAIAHSLETLEAMDEWNRNQHRRSGLWQRVLDSQVT 84 (194)
T ss_dssp -CCEEEEEEEEESCSCTTTCCEEEE-EEEE-EETTCCEEEECCCEECCCCHHHHHTSCSHHHHHHHHHTHHHHHHHCCCC
T ss_pred CCCCEEEEEeECCCCCCCCCccEEE-EEEE-EcCCcceeccCceEEEeCCHHHhhccchHHHHHHHhhCCCHHHHhcCCC
Confidence 44579999999999874 456666 5655 45555333 78999999876 44444 459999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCcccccCCCCCcE------EEecccHHHHHHhcCcCCC------CceeecccccCCcccCCCC
Q 018586 201 LKEVKDKILEILNNGESTGRLMLDDGKARL------LVGHGLEHDLDSLRMNYPD------HMLRDTAKYRPLMKTNLVS 268 (353)
Q Consensus 201 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------lvgh~~~~D~~~l~~~~~~------~~~~Dt~~l~~~~~~~~~~ 268 (353)
+++|+++|.+|+ ++.+ |||||+.||+.||+..++. .+.+|+.
T Consensus 85 ~~ev~~~~~~~l--------------~~~~~~~~~~lvghn~~FD~~fL~~~~~~~~~~~~~~~~d~~------------ 138 (194)
T 2gbz_A 85 HAQAEAQTVAFL--------------GEWIRAGASPMCGNSICQDRRFLHRQMSRLERYFHYRNLDVS------------ 138 (194)
T ss_dssp HHHHHHHHHHHH--------------TTTCCTTSSCEEESSHHHHHHHHHHHCHHHHHHSCSCEEEHH------------
T ss_pred HHHHHHHHHHHH--------------HHhCCCCCceEEecCHHHhHHHHHHHHHHhcccCCCccccHH------------
Confidence 999999999999 5555 9999999999999954432 2345554
Q ss_pred CcHHHHHHHHh-----CCcCCCCCCChHHHHHHHHHHHHHHHhchhh
Q 018586 269 HSLKYLTRTYL-----GYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 269 ~~L~~l~~~~~-----~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
+|..|++.++ +++ ..++|+|++||++|++||+++++.+..
T Consensus 139 -~l~~l~~~~~p~~~~~i~-~~~~H~Al~Da~ata~ll~~~~~~~~~ 183 (194)
T 2gbz_A 139 -TIKELARRWAPAVASGFA-KSSAHTALSDVRDSIDELRHYRQFMGT 183 (194)
T ss_dssp -HHHHHHHHHCGGGGTTCC-CCSCCSHHHHHHHHHHHHHHHHTTSHH
T ss_pred -HHHHHHHHhCHHHHhCCC-CCCCcccHHHHHHHHHHHHHHHHHhcc
Confidence 3445555552 244 345999999999999999999998755
No 17
>2qxf_A Exodeoxyribonuclease I; alpha-beta domain, DNAQ superfamily, SH3-like domain, produc structure, DNA damage, DNA repair, exonuclease; HET: TMP; 1.50A {Escherichia coli} SCOP: c.55.3.5 PDB: 1fxx_A* 3c94_A 3c95_A 3hl8_A* 3hp9_A*
Probab=99.88 E-value=3.3e-23 Score=200.48 Aligned_cols=162 Identities=19% Similarity=0.213 Sum_probs=127.9
Q ss_pred CCceeeccCccccccC--CCCccceeEEeeecCCCCeE---EeeeccCCCCc--cccccccCCCCHhhhcCCCCh-HHHH
Q 018586 134 GPKAVAMDCEMVGGGS--NGTLDLCARVCLVDEDENVI---FHTYVQPQLPV--TNYRYEVTGLTEEDIKNAMPL-KEVK 205 (353)
Q Consensus 134 ~~~~~~~D~Ettg~~~--~~~~~il~~v~ivd~~g~~~---~~~lv~P~~~i--~~~~~~~~GIt~e~l~~~~~~-~~v~ 205 (353)
...++++|+||||+++ +.++++ |.|.+ +.+|+++ |+.+|+|..++ ++.++.|||||+++|.+++.+ .+|+
T Consensus 8 ~~~~vv~DlETTGl~p~~d~IIEI-gaV~v-d~~g~ii~~~f~~lVkP~~~ilp~p~a~~IhGIT~e~l~~ap~~~~evl 85 (482)
T 2qxf_A 8 QSTFLFHDYETFGTHPALDRPAQF-AAIRT-DSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFA 85 (482)
T ss_dssp CCEEEEEEEEESSSCTTTSCEEEE-EEEEE-CTTSCBCSCCEEEEBCCCTTCCCCHHHHHHHCCCHHHHHHHCBCHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCeEEEE-EEEEE-ECCCeEEeeeeEEEECCCCCCCCCHHHHHHhCCCHHHHhcCCCCHHHHH
Confidence 3469999999999864 466666 56644 4577775 99999999987 577889999999999987655 9999
Q ss_pred HHHHHHHhcCCCCcccccCCCC--CcEEEecc-cHHHHHHhcC-----cCC--C------CceeecccccCCccc-----
Q 018586 206 DKILEILNNGESTGRLMLDDGK--ARLLVGHG-LEHDLDSLRM-----NYP--D------HMLRDTAKYRPLMKT----- 264 (353)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~--~~~lvgh~-~~~D~~~l~~-----~~~--~------~~~~Dt~~l~~~~~~----- 264 (353)
.+|.+|+ + +.+||||| +.||+.||+. ..+ . ...+||..+++..++
T Consensus 86 ~~f~~~l--------------~~~~~~lVaHNs~~FD~~fL~~~~~r~g~~~~~~~w~~~~~~iDtl~l~r~~~~~~~~~ 151 (482)
T 2qxf_A 86 ARIHSLF--------------TVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEG 151 (482)
T ss_dssp HHHHHHH--------------TSTTEEEEESSTTTTHHHHHHHHHHHTTSCSSGGGTGGGCEEEEHHHHHHHHHHHCCTT
T ss_pred HHHHHHH--------------cCCCCEEEEECCHHHHHHHHHHHHHHhCCCccccccccCCceeeHHHHHHHHHHhCccc
Confidence 9999999 5 89999999 9999999981 111 1 457899887766542
Q ss_pred --------CCCCCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchhhhhh
Q 018586 265 --------NLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDHQVEE 313 (353)
Q Consensus 265 --------~~~~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~~~~~ 313 (353)
...+++|+.|++.+ |++. .++|+|++||++|++||.++.+....+.+
T Consensus 152 ~~wP~~~~~~~s~kL~~L~~~~-Gi~~-~~aHrAL~DA~aTa~l~~~l~~~~p~l~~ 206 (482)
T 2qxf_A 152 INWPENDDGLPSFRLEHLTKAN-GIEH-SNAHDAMADVYATIAMAKLVKTRQPRLFD 206 (482)
T ss_dssp SCCCBCTTSSBCCCHHHHHHHT-TCCC-C---CTTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred ccCcccccCCCCCCHHHHHHHc-CCCC-CCCCCHHHHHHHHHHHHHHHHHhChhhhH
Confidence 44589999999988 9884 45899999999999999999876555443
No 18
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.70 E-value=4.8e-18 Score=145.48 Aligned_cols=119 Identities=24% Similarity=0.421 Sum_probs=81.1
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc-----CCCCCCCCCCcccccc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDR 79 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~c~~Cgk~f~~~ 79 (353)
.+.|++++||.|+.|++.|.....|..|++. |.++++ .|..|++.|.....|..|+ ..++.|+.|++.|...
T Consensus 13 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 90 (190)
T 2i13_A 13 AALEPGEKPYACPECGKSFSRSDHLAEHQRT--HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQR 90 (190)
T ss_dssp ------------------CCSSHHHHHGGGC--C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCH
T ss_pred hhhcCCCCCCcCCCCccccCCHHHHHHHHHH--cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCH
Confidence 4567788889999999999998889999888 888777 8999999999988888888 3567788999888764
Q ss_pred ----------------ccccccccccCchhHHHHHHHhcCCCCCCcccCCcchhhhhhhcccc
Q 018586 80 ----------------GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ----------------~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|+.|++.|...+.|..|+++|++++||.|+.|+..+.....+..+.
T Consensus 91 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~ 153 (190)
T 2i13_A 91 ANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ 153 (190)
T ss_dssp HHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHH
Confidence 38888888888888888888888888888888887766666665544
No 19
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.69 E-value=7.2e-18 Score=136.18 Aligned_cols=96 Identities=23% Similarity=0.316 Sum_probs=85.0
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCcccccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDR 79 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~ 79 (353)
+-++.|.|+++|.|+.|+++|...+.|..|+++ |+++++ .|..|++.|...+.|..|+ +++.++
T Consensus 12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~---------- 79 (133)
T 2lt7_A 12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNI--HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRY---------- 79 (133)
T ss_dssp EEEEEETTEEEEEETTTCCEESCHHHHHHHHHH--HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCE----------
T ss_pred hceeecCCCcCeECCCCCCCcCCHHHHHHHHHH--cCCCCCeeCCccCeecccccchhhhccccCCCccc----------
Confidence 335678899999999999999999999999999 999999 9999999999999999999 455555
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.||++|...+.|..|+++|++++|+.+..
T Consensus 80 ~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k 111 (133)
T 2lt7_A 80 QCLACGKSFINYQFMSSHIKSVHSQDPSGDSK 111 (133)
T ss_dssp EESSSCCEESSHHHHHHHHHHHTCCCTTSSSC
T ss_pred cCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCC
Confidence 68999999999999999999999887654433
No 20
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=99.68 E-value=1e-17 Score=143.47 Aligned_cols=119 Identities=23% Similarity=0.388 Sum_probs=105.0
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc-----CCCCCCCCCCcccccc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHCSGIFSDR 79 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~c~~Cgk~f~~~ 79 (353)
.+.|.++++|.|+.|++.|.....|..|++. |.++++ .|..|++.|.....|..|+ .+++.|+.|++.|...
T Consensus 41 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~ 118 (190)
T 2i13_A 41 QRTHTGEKPYKCPECGKSFSDKKDLTRHQRT--HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQL 118 (190)
T ss_dssp GGCC---CCEECTTTCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSH
T ss_pred HHHcCCCCCccCCCcCchhCCHHHHHHHHHh--cCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCH
Confidence 4578899999999999999999999999999 888888 9999999999999999998 4678899999999875
Q ss_pred ----------------ccccccccccCchhHHHHHHHhcCCCCCCcccCCcchhhhhhhcccc
Q 018586 80 ----------------GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ----------------~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|+..+.....+..+.
T Consensus 119 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~ 181 (190)
T 2i13_A 119 AHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ 181 (190)
T ss_dssp HHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHH
Confidence 39999999999999999999999999999999998877776666544
No 21
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.62 E-value=4.3e-16 Score=123.41 Aligned_cols=106 Identities=22% Similarity=0.334 Sum_probs=92.0
Q ss_pred CCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhccC------CCCCCCCCCcccccccc
Q 018586 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLT------GPLSKAHCSGIFSDRGC 81 (353)
Q Consensus 9 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~------~~~~c~~Cgk~f~~~~C 81 (353)
.+++++|.|+.|++.|.....|..|++. |.++++ .|..|++.|.....|..|+. ++.+. .|
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~----------~C 69 (124)
T 2dlq_A 2 SSGSSGVECPTCHKKFLSKYYLKVHNRK--HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF----------TC 69 (124)
T ss_dssp CCCCSSCCCTTTCCCCSSHHHHHHHHHH--HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCE----------EC
T ss_pred CCCCCCCCCCCCCCcCCCHHHHHHHHHh--CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCe----------EC
Confidence 4688999999999999999999999999 888888 99999999999999999972 12222 58
Q ss_pred ccccccccCchhHHHHHHHhcCCCCCCcccCCcchhhhhhhcccc
Q 018586 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 82 ~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
+.|++.|...+.|..|+++|++++||.|+.|+..+.....+..++
T Consensus 70 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~ 114 (124)
T 2dlq_A 70 SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114 (124)
T ss_dssp SSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHH
Confidence 999999999999999999999999999999988777766666544
No 22
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=99.58 E-value=6.3e-15 Score=113.60 Aligned_cols=93 Identities=23% Similarity=0.456 Sum_probs=81.8
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCcccccccc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGC 81 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C 81 (353)
.....++++|.|+.|++.|.....|..|++. |.++++ .|..|++.|.....|..|+ .++.+. .|
T Consensus 9 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C 76 (106)
T 2ee8_A 9 RLPSKTKKEFICKFCGRHFTKSYNLLIHERT--HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF----------KC 76 (106)
T ss_dssp CCCCCCCCCCBCSSSCCBCSSHHHHHHHHHH--HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTT----------SC
T ss_pred cCCcCCCcCeECCCCCCccCCHHHHHHHHHH--cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCe----------EC
Confidence 4456678999999999999999999999999 888888 9999999999999999998 333333 58
Q ss_pred ccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 82 NLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 82 ~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
+.|++.|...+.|..|+++|++++||.+.
T Consensus 77 ~~C~~~f~~~~~L~~H~~~H~~~~~~~~~ 105 (106)
T 2ee8_A 77 QECGKGFCQSRTLAVHKTLHMQTSSPTAA 105 (106)
T ss_dssp SSSCCCCSSHHHHHHHHHHTTSCCCCCCC
T ss_pred CCcCCcccCHHHHHHHHHHhCCCCCCcCC
Confidence 89999999999999999999999998753
No 23
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.57 E-value=1.8e-15 Score=129.38 Aligned_cols=117 Identities=18% Similarity=0.294 Sum_probs=102.1
Q ss_pred CCCCCceee--ccccccccChHHHHHHHhhhcCCCCCC-cc--ccCcccCCChHHHHhcc-----CCCCCCC--CCCccc
Q 018586 9 KRSTARHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KC--AVCQKLSKSFESLREHL-----TGPLSKA--HCSGIF 76 (353)
Q Consensus 9 h~~~k~~~C--~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C--~~C~~~f~~~~~l~~H~-----~~~~~c~--~Cgk~f 76 (353)
..+.++|.| +.|++.|.....|..|++. |.++++ .| ..|++.|.....|..|+ .+++.|. .|++.|
T Consensus 7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f 84 (190)
T 1tf6_A 7 PVVYKRYICSFADCGAAYNKNWKLQAHLCK--HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF 84 (190)
T ss_dssp ---CCCCBCSSTTTCCBCSSHHHHHHHHHH--HHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE
T ss_pred cCCCcceeCCCCCCcchhCCHHHHHHHHHh--cCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc
Confidence 457899999 6899999999999999999 888888 99 88999999999999998 3467898 899999
Q ss_pred ccc------------------cc--ccccccccCchhHHHHHHHhcCCCCCCccc--CCcchhhhhhhccccc
Q 018586 77 SDR------------------GC--NLCMNIFDSPSSLIKHKEACSLSAPVPFEK--TLSNAESQKKISGAID 127 (353)
Q Consensus 77 ~~~------------------~C--~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~--~~~~~~~~~~~~~~~~ 127 (353)
... .| +.|++.|...+.|..|+++|++++||.|+. |+..+.....+..+..
T Consensus 85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~ 157 (190)
T 1tf6_A 85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK 157 (190)
T ss_dssp SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHT
T ss_pred CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHH
Confidence 854 38 889999999999999999999999999988 9988887777776654
No 24
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.57 E-value=2.8e-15 Score=115.98 Aligned_cols=95 Identities=19% Similarity=0.251 Sum_probs=84.1
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc--CCCCCCCCCCcccccc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL--TGPLSKAHCSGIFSDR 79 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~--~~~~~c~~Cgk~f~~~ 79 (353)
++..+.|++++||.|+.|++.|.....|..|+++ |. ++ .|..|++.|.....|..|+ .++.+.
T Consensus 5 ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--H~--~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~---------- 70 (107)
T 1wjp_A 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERL--CR--NAAVCPYCSLRFFSPELKQEHESKCEYKKL---------- 70 (107)
T ss_dssp CCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH--HH--HSBCCTTTCCCBSSHHHHHHHHHHCSTGGG----------
T ss_pred cccCcccCCCcCeECCCCCCccCCHHHHHHHHHH--CC--CCccCCCCCCccCCHHHHHHHHHcCCCCCc----------
Confidence 5668899999999999999999999999999999 73 46 9999999999999999998 333333
Q ss_pred ccccccccccCchhHHHHHH-HhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKE-ACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~-~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|++ +|++++||++..
T Consensus 71 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~ 103 (107)
T 1wjp_A 71 TCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSG 103 (107)
T ss_dssp EEGGGTEECSSHHHHHHHHHHTSCCCCCCCCCC
T ss_pred cCccccchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 69999999999999999997 899999998753
No 25
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.57 E-value=1.2e-15 Score=119.97 Aligned_cols=104 Identities=19% Similarity=0.388 Sum_probs=89.7
Q ss_pred CCCCCceeecc--ccccccChHHHHHHHhhhcCCCCCC-ccc--cCcccCCChHHHHhcc---CCCCCCCCCCccccccc
Q 018586 9 KRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRG 80 (353)
Q Consensus 9 h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~h~~~~~-~C~--~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~ 80 (353)
+++++||.|+. |++.|.....|..|++. |.++++ .|. .|++.|.....|..|+ .++.+. .
T Consensus 1 a~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~----------~ 68 (119)
T 2jp9_A 1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRK--HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF----------Q 68 (119)
T ss_dssp CCSSCCBCCCSTTSCCCBSCHHHHHHHHHH--HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCE----------E
T ss_pred CCCCeeeeCCCCCCcchhCCHHHHHHHHHh--hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCc----------c
Confidence 36789999997 99999999999999999 888888 998 7999999999999998 333333 5
Q ss_pred cccccccccCchhHHHHHHHhcCCCCCCc--ccCCcchhhhhhhcc
Q 018586 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPF--EKTLSNAESQKKISG 124 (353)
Q Consensus 81 C~~C~k~F~~~s~L~~H~~~h~~~k~~~c--~~~~~~~~~~~~~~~ 124 (353)
|+.|++.|...+.|..|+++|++++||.| +.|+..+.....+..
T Consensus 69 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~ 114 (119)
T 2jp9_A 69 CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVR 114 (119)
T ss_dssp CTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHH
T ss_pred CCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHH
Confidence 88899999999999999999999999999 789877666555443
No 26
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.53 E-value=1.1e-14 Score=110.11 Aligned_cols=87 Identities=31% Similarity=0.519 Sum_probs=78.3
Q ss_pred CCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCcccccccccc
Q 018586 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNL 83 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~ 83 (353)
++++++||.|+.|++.|.....|..|++. |.++++ .|..|++.|.....|..|+ .++.+. .|+.
T Consensus 2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~ 69 (96)
T 2dmd_A 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRC--HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF----------KCQI 69 (96)
T ss_dssp CCCCCCCCCBTTTTBCCCCHHHHHHHGGG--CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCE----------ECSS
T ss_pred CCCCCcCeECCCCCCccCCHHHHHHHHHh--cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCc----------cCCC
Confidence 46789999999999999999999999999 888888 9999999999999999998 333333 5899
Q ss_pred ccccccCchhHHHHHHHhcCCCC
Q 018586 84 CMNIFDSPSSLIKHKEACSLSAP 106 (353)
Q Consensus 84 C~k~F~~~s~L~~H~~~h~~~k~ 106 (353)
|++.|...+.|..|+++|+++++
T Consensus 70 C~~~f~~~~~l~~H~~~h~~~~~ 92 (96)
T 2dmd_A 70 CPYASRNSSQLTVHLRSHTGDSG 92 (96)
T ss_dssp SSCEESSHHHHHHHHTTCCSCCC
T ss_pred CCCccCCHHHHHHHHHHhcCCCC
Confidence 99999999999999999998876
No 27
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.53 E-value=7.6e-15 Score=121.14 Aligned_cols=100 Identities=21% Similarity=0.369 Sum_probs=72.5
Q ss_pred CCCCCceeeccccccccChHHHHHHHhhhcCCCCC---------CccccCcccCCChHHHHhcc-----CCCCCCCC--C
Q 018586 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQ---------PKCAVCQKLSKSFESLREHL-----TGPLSKAH--C 72 (353)
Q Consensus 9 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~---------~~C~~C~~~f~~~~~l~~H~-----~~~~~c~~--C 72 (353)
+..+.+|.|..|++.|.....|..|++.+ |.+.. ..|..|++.|.....|..|+ .+++.|.. |
T Consensus 20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~-H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C 98 (155)
T 2rpc_A 20 DEAQLSRPKKSCDRTFSTMHELVTHVTME-HVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC 98 (155)
T ss_dssp CTTCCSSSCCCCCCCBSSHHHHHHHHHTT-TSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred chhhcccccccCCcccCCHHHHHHHHHhh-cCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence 45678899999999999999999999853 66543 36999999999999999998 34566655 6
Q ss_pred Ccccccc----------------cccc--ccccccCchhHHHHHHHhcCCCCCCc
Q 018586 73 SGIFSDR----------------GCNL--CMNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 73 gk~f~~~----------------~C~~--C~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
++.|... .|+. |+++|...+.|..|+++|++++||+|
T Consensus 99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c 153 (155)
T 2rpc_A 99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153 (155)
T ss_dssp CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence 6666543 2554 66666666666666655655555555
No 28
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=99.52 E-value=8.2e-15 Score=116.21 Aligned_cols=102 Identities=20% Similarity=0.295 Sum_probs=78.1
Q ss_pred CCCceeec--cccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccc--
Q 018586 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCN-- 82 (353)
Q Consensus 11 ~~k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~-- 82 (353)
++++|.|+ .|++.|.....|..|+++ | ++++ .|..|++.|.....|..|+ .++.+. .|+
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~~ 68 (124)
T 1ubd_C 2 EPRTIACPHKGCTKMFRDNSAMRKHLHT--H-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF----------QCTFE 68 (124)
T ss_dssp ---CEECCSTTCCCEESSHHHHHHHHGG--G-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCE----------ECCST
T ss_pred CCCcccCCCCCCcCccCCHHHHHHHHHH--c-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCe----------eCCCC
Confidence 46799999 899999999999999998 8 6666 9999999999999999998 232222 354
Q ss_pred cccccccCchhHHHHHHHhcCCCCCCcc--cCCcchhhhhhhccc
Q 018586 83 LCMNIFDSPSSLIKHKEACSLSAPVPFE--KTLSNAESQKKISGA 125 (353)
Q Consensus 83 ~C~k~F~~~s~L~~H~~~h~~~k~~~c~--~~~~~~~~~~~~~~~ 125 (353)
.|++.|...+.|..|+++|++++||.|+ .|+..+.....+..+
T Consensus 69 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H 113 (124)
T 1ubd_C 69 GCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113 (124)
T ss_dssp TCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHH
T ss_pred CCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHH
Confidence 3788888888888888888888888884 477666555555443
No 29
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.50 E-value=2e-14 Score=118.53 Aligned_cols=114 Identities=18% Similarity=0.298 Sum_probs=92.0
Q ss_pred CCceeeccccccccChHHHHHHHhh-hcCCCCCC-ccc-----cCcccCCChHHHHhcc-----CCCCCCCC--CCcccc
Q 018586 12 TARHKCVACYKQFKRKDHLIEHMKI-SYHSVHQP-KCA-----VCQKLSKSFESLREHL-----TGPLSKAH--CSGIFS 77 (353)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~-~~h~~~~~-~C~-----~C~~~f~~~~~l~~H~-----~~~~~c~~--Cgk~f~ 77 (353)
|.+|.|+.|++.|.....|..|++. +.|.++++ .|. .|++.|.....|..|+ .+++.|.. |++.|.
T Consensus 1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~ 80 (155)
T 2gli_A 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS 80 (155)
T ss_dssp CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence 4578999999999999999999982 11777777 665 4459999999999998 46788974 999998
Q ss_pred cc----------------cccc--ccccccCchhHHHHH-HHhcCCCCCCccc--CCcchhhhhhhccc
Q 018586 78 DR----------------GCNL--CMNIFDSPSSLIKHK-EACSLSAPVPFEK--TLSNAESQKKISGA 125 (353)
Q Consensus 78 ~~----------------~C~~--C~k~F~~~s~L~~H~-~~h~~~k~~~c~~--~~~~~~~~~~~~~~ 125 (353)
.. .|+. |+++|...+.|..|+ ++|++++||.|+. |+..+.....+..+
T Consensus 81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H 149 (155)
T 2gli_A 81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149 (155)
T ss_dssp SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHH
T ss_pred CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHH
Confidence 65 3987 999999999999998 7899999999977 87776665555443
No 30
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=99.50 E-value=7.6e-15 Score=125.44 Aligned_cols=114 Identities=19% Similarity=0.331 Sum_probs=98.0
Q ss_pred CCCCCCCceee--ccccccccChHHHHHHHhhhcCCCCCC-ccc--cCcccCCChHHHHhcc-------CCCCCC--CCC
Q 018586 7 LPKRSTARHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL-------TGPLSK--AHC 72 (353)
Q Consensus 7 ~~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~--~C~~~f~~~~~l~~H~-------~~~~~c--~~C 72 (353)
+.|++++||.| +.|++.|.....|..|+++ |.++++ .|. .|++.|.....|..|+ ..++.| +.|
T Consensus 35 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C 112 (190)
T 1tf6_A 35 CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT--HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENC 112 (190)
T ss_dssp HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTT--TTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSS
T ss_pred HhcCCCCCccCCCCCCChhhCCHHHHHHHHHH--ccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCC
Confidence 35778999999 8899999999999999999 998888 999 8999999999999997 235778 999
Q ss_pred Ccccccc----------------cccc--ccccccCchhHHHHHHHhcCCCCCCccc---CCcchhhhhhhccc
Q 018586 73 SGIFSDR----------------GCNL--CMNIFDSPSSLIKHKEACSLSAPVPFEK---TLSNAESQKKISGA 125 (353)
Q Consensus 73 gk~f~~~----------------~C~~--C~k~F~~~s~L~~H~~~h~~~k~~~c~~---~~~~~~~~~~~~~~ 125 (353)
|+.|... .|+. |+++|...+.|..|+++|++ |+|+. |+..+.....+..+
T Consensus 113 ~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H 183 (190)
T 1tf6_A 113 GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKH 183 (190)
T ss_dssp CEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHH
T ss_pred ccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHH
Confidence 9999975 3987 99999999999999999988 88888 77665555544443
No 31
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=6.5e-14 Score=109.56 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=78.9
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC--ccccCcccC--CChHHHHhcc---CCCCCCCCCCccccc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP--KCAVCQKLS--KSFESLREHL---TGPLSKAHCSGIFSD 78 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~--~C~~C~~~f--~~~~~l~~H~---~~~~~c~~Cgk~f~~ 78 (353)
.+.|++++||.|+.|++.|.....|..|++.+.|.+.++ .|..|++.| .....|..|+ .++.++
T Consensus 11 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~--------- 81 (115)
T 2dmi_A 11 GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL--------- 81 (115)
T ss_dssp CCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC---------
T ss_pred eeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce---------
Confidence 578999999999999999999999999998622344444 699999999 8889999998 334444
Q ss_pred cccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 79 RGCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 79 ~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|++.|...+.|..|+++|+.....+++
T Consensus 82 -~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~ 112 (115)
T 2dmi_A 82 -KCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112 (115)
T ss_dssp -BCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred -ECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence 5899999999999999999999877665544
No 32
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=99.47 E-value=1.9e-14 Score=107.33 Aligned_cols=84 Identities=21% Similarity=0.509 Sum_probs=71.6
Q ss_pred CCCceeec--cccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccc
Q 018586 11 STARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLC 84 (353)
Q Consensus 11 ~~k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C 84 (353)
|++||.|+ .|++.|.....|..|++. |.++++ .|..|++.|.....|..|+ .++.+. .|+.|
T Consensus 1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C 68 (90)
T 1a1h_A 1 MERPYACPVESCDRRFSQSGSLTRHIRI--HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF----------ACDIC 68 (90)
T ss_dssp --CCEECCSSSCCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCE----------ECTTT
T ss_pred CCCceECCCCCCCCccCCHHHHHHHHHH--hCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCc----------cCCCC
Confidence 47899998 699999999999999999 888888 9999999999999999998 344333 58899
Q ss_pred cccccCchhHHHHHHHhcCCCC
Q 018586 85 MNIFDSPSSLIKHKEACSLSAP 106 (353)
Q Consensus 85 ~k~F~~~s~L~~H~~~h~~~k~ 106 (353)
++.|...+.|..|+++|+++++
T Consensus 69 ~~~f~~~~~l~~H~~~H~~~k~ 90 (90)
T 1a1h_A 69 GRKFARSDERKRHTKIHLRQKD 90 (90)
T ss_dssp CCEESSHHHHHHHHGGGGC---
T ss_pred CchhCCHHHHHHHHHHhcccCC
Confidence 9999999999999999998753
No 33
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.45 E-value=8.5e-14 Score=107.97 Aligned_cols=85 Identities=29% Similarity=0.485 Sum_probs=75.8
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCcccccccc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGC 81 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C 81 (353)
..+|+++++|.| .|++.|.....|..|++. |.++++ .|..|++.|.....|..|+ .++.++ .|
T Consensus 2 s~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C 68 (110)
T 2csh_A 2 SSGSSGDKLYPC-QCGKSFTHKSQRDRHMSM--HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY----------EC 68 (110)
T ss_dssp CCCCCCCCCEEC-TTSCEESSHHHHHHHHHH--HSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCE----------EC
T ss_pred CCCCCCCCCEec-cCCCccCCHHHHHHHHHH--cCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCe----------eC
Confidence 457999999999 999999999999999999 888888 9999999999999999998 233332 68
Q ss_pred ccccccccCchhHHHHHHHhcC
Q 018586 82 NLCMNIFDSPSSLIKHKEACSL 103 (353)
Q Consensus 82 ~~C~k~F~~~s~L~~H~~~h~~ 103 (353)
+.|++.|...+.|..|+++|+.
T Consensus 69 ~~C~~~f~~~~~l~~H~~~~~~ 90 (110)
T 2csh_A 69 NICAKRFMWRDSFHRHVTSCTK 90 (110)
T ss_dssp SSSCCEESCHHHHHHHHHHHHH
T ss_pred CCCcchhcCHHHHHHHHHHccc
Confidence 9999999999999999999874
No 34
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.44 E-value=1.7e-13 Score=103.24 Aligned_cols=84 Identities=27% Similarity=0.413 Sum_probs=74.0
Q ss_pred CCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCC--CCCCCCCccccccccc
Q 018586 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGP--LSKAHCSGIFSDRGCN 82 (353)
Q Consensus 9 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~--~~c~~Cgk~f~~~~C~ 82 (353)
.+++++|.|+.|++.|.....|..|++. |.++++ .|..|++.|.....|..|+ .+. .++ .|+
T Consensus 2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~----------~C~ 69 (95)
T 2yt9_A 2 SSGSSGVACEICGKIFRDVYHLNRHKLS--HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY----------ICQ 69 (95)
T ss_dssp CCCCSCEECSSSCCEESSSHHHHHHHHH--SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSB----------CCS
T ss_pred CCCCCCeECCCCCCccCChHHHHHHHHh--cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCce----------ECC
Confidence 4688999999999999999999999999 998888 9999999999999999998 332 333 588
Q ss_pred cccccccCchhHHHHHH-HhcCC
Q 018586 83 LCMNIFDSPSSLIKHKE-ACSLS 104 (353)
Q Consensus 83 ~C~k~F~~~s~L~~H~~-~h~~~ 104 (353)
.|++.|...+.|..|++ .|.++
T Consensus 70 ~C~~~f~~~~~L~~H~~~~H~~~ 92 (95)
T 2yt9_A 70 SCGKGFSRPDHLNGHIKQVHSGP 92 (95)
T ss_dssp SSCCCBSSHHHHHHHHHHTSCCC
T ss_pred CccchhCCHHHHHHHHHHhcCCC
Confidence 89999999999999986 67654
No 35
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=99.42 E-value=9.7e-14 Score=101.39 Aligned_cols=78 Identities=32% Similarity=0.597 Sum_probs=69.7
Q ss_pred ceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCcccccccccccccccc
Q 018586 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFD 89 (353)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~ 89 (353)
||.|+.|++.|.....|..|++. |.++++ .|..|++.|.....|..|+ .++.+. .|+.|++.|.
T Consensus 1 ~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~ 68 (82)
T 2kmk_A 1 SFDCKICGKSFKRSSTLSTHLLI--HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH----------KCQVCGKAFS 68 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH--HHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCE----------ECTTTSCEES
T ss_pred CccCCCCcccccCchhHHHHHHH--cCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCC----------cCCCcchhhC
Confidence 69999999999999999999999 888888 9999999999999999998 344333 5888999999
Q ss_pred CchhHHHHHHHhcC
Q 018586 90 SPSSLIKHKEACSL 103 (353)
Q Consensus 90 ~~s~L~~H~~~h~~ 103 (353)
..+.|..|+++|+|
T Consensus 69 ~~~~l~~H~~~H~g 82 (82)
T 2kmk_A 69 QSSNLITHSRKHTG 82 (82)
T ss_dssp SHHHHHHHHHHHC-
T ss_pred ChHHHHHHHHhhCC
Confidence 99999999999975
No 36
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.36 E-value=6.1e-13 Score=109.45 Aligned_cols=94 Identities=33% Similarity=0.588 Sum_probs=83.3
Q ss_pred CCCCCCceeeccc-----cccccChHHHHHHHhhhcCCCCCC-cccc--CcccCCChHHHHhcc-----CCCCCCCC--C
Q 018586 8 PKRSTARHKCVAC-----YKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL-----TGPLSKAH--C 72 (353)
Q Consensus 8 ~h~~~k~~~C~~C-----~k~f~~~~~l~~H~~~~~h~~~~~-~C~~--C~~~f~~~~~l~~H~-----~~~~~c~~--C 72 (353)
.|+++++|.|+.| ++.|.....|..|++. |.++++ .|.. |++.|.....|..|+ .+++.|+. |
T Consensus 28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C 105 (155)
T 2gli_A 28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR--HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGC 105 (155)
T ss_dssp SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH--HHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTC
T ss_pred cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHh--cCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCC
Confidence 6788999998853 4999999999999999 888888 9984 999999999999998 35688998 9
Q ss_pred Ccccccc-----------------cccc--ccccccCchhHHHHHHHhcC
Q 018586 73 SGIFSDR-----------------GCNL--CMNIFDSPSSLIKHKEACSL 103 (353)
Q Consensus 73 gk~f~~~-----------------~C~~--C~k~F~~~s~L~~H~~~h~~ 103 (353)
++.|... .|+. |+++|...+.|..|+++|+|
T Consensus 106 ~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg 155 (155)
T 2gli_A 106 SKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155)
T ss_dssp CCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred CCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence 9999875 2988 99999999999999999875
No 37
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=99.31 E-value=4.6e-12 Score=96.09 Aligned_cols=85 Identities=25% Similarity=0.454 Sum_probs=73.7
Q ss_pred CCCCCCCceeecc--ccccccChHHHHHHHhhhcCCCCCC-ccc--cCcccCCChHHHHhcc---CCCCCCCCCCccccc
Q 018586 7 LPKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL---TGPLSKAHCSGIFSD 78 (353)
Q Consensus 7 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~h~~~~~-~C~--~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~ 78 (353)
......++|.|.. |++.|.....|..|++. |.++++ .|. .|++.|.....|..|+ .++.++
T Consensus 8 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~--------- 76 (100)
T 2ebt_A 8 PDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRT--HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPF--------- 76 (100)
T ss_dssp CCCCSCCCEECCSSSCCCEESCHHHHHHHHHH--HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSC---------
T ss_pred cccccCcceEcCCCCCCCcccCHHHHHHHHHH--hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCe---------
Confidence 3445678999996 99999999999999999 888888 996 6999999999999998 444443
Q ss_pred cccccccccccCchhHHHHHHHhcC
Q 018586 79 RGCNLCMNIFDSPSSLIKHKEACSL 103 (353)
Q Consensus 79 ~~C~~C~k~F~~~s~L~~H~~~h~~ 103 (353)
.|+.|++.|...+.|..|+++|++
T Consensus 77 -~C~~C~~~f~~~~~l~~H~~~H~~ 100 (100)
T 2ebt_A 77 -QCGVCNRSFSRSDHLALHMKRHQN 100 (100)
T ss_dssp -BCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred -ECCCCcCccCCHHHHHHHHHHhCC
Confidence 588899999999999999999974
No 38
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=99.28 E-value=2.7e-12 Score=101.30 Aligned_cols=88 Identities=27% Similarity=0.435 Sum_probs=74.5
Q ss_pred CCCCCCCceeeccccccccChHHHHHHHhhh-cCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCcccccccc
Q 018586 7 LPKRSTARHKCVACYKQFKRKDHLIEHMKIS-YHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGC 81 (353)
Q Consensus 7 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~-~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C 81 (353)
+.|.+++||.|+.|++.|.....|..|+..+ .|.++++ .|..|++.|.....|..|+ .++.++ .|
T Consensus 28 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C 97 (124)
T 2dlq_A 28 RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPY----------KC 97 (124)
T ss_dssp HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSE----------EC
T ss_pred HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCc----------cC
Confidence 4577889999999999999999999999852 1466777 9999999999999999998 444443 58
Q ss_pred ccccccccCchhHHHHHHH-hcCC
Q 018586 82 NLCMNIFDSPSSLIKHKEA-CSLS 104 (353)
Q Consensus 82 ~~C~k~F~~~s~L~~H~~~-h~~~ 104 (353)
+.|++.|...+.|..|++. |.++
T Consensus 98 ~~C~~~f~~~~~l~~H~~~~H~~~ 121 (124)
T 2dlq_A 98 SSCSQQFMQKKDLQSHMIKLHSGP 121 (124)
T ss_dssp SSSCCEESSHHHHHHHHHHTSSCS
T ss_pred CCccchhCCHHHHHHHHHHHCCCC
Confidence 8999999999999999985 6554
No 39
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=99.26 E-value=1.6e-12 Score=101.93 Aligned_cols=83 Identities=25% Similarity=0.539 Sum_probs=72.9
Q ss_pred CCCCCCCceeec--cccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccc
Q 018586 7 LPKRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRG 80 (353)
Q Consensus 7 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~ 80 (353)
+.|.+++||.|+ .|++.|.....|..|++. |.++++ .|..|++.|.....|..|+ .++.+. .
T Consensus 29 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~ 96 (119)
T 2jp9_A 29 RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR--HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPF----------S 96 (119)
T ss_dssp HHHHTTCCEECCSTTCCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCE----------E
T ss_pred HhhCCCCCccCCCCCCcCccCCHHHHHHHHHH--cCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCe----------e
Confidence 357788999999 799999999999999999 888888 9999999999999999998 333332 3
Q ss_pred c--ccccccccCchhHHHHHHHh
Q 018586 81 C--NLCMNIFDSPSSLIKHKEAC 101 (353)
Q Consensus 81 C--~~C~k~F~~~s~L~~H~~~h 101 (353)
| +.|++.|...+.|..|+++|
T Consensus 97 C~~~~C~~~f~~~~~L~~H~~~H 119 (119)
T 2jp9_A 97 CRWPSCQKKFARSDELVRHHNMH 119 (119)
T ss_dssp CCSTTCCCEESSHHHHHHHHHTC
T ss_pred CCCCCCccccCCHHHHHHHHhcC
Confidence 5 88999999999999999876
No 40
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.26 E-value=4.7e-12 Score=91.51 Aligned_cols=69 Identities=30% Similarity=0.500 Sum_probs=58.5
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCccccccccccc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLC 84 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C 84 (353)
....+.+++||.|+.|++.|.....|..|+++ |.++++ + .|+.|
T Consensus 9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~----------------------~------------~C~~C 52 (77)
T 2cot_A 9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRT--HTGEKP----------------------Y------------KCDEC 52 (77)
T ss_dssp CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT--TCCSCS----------------------E------------ECSSS
T ss_pred CcCcCCCCCCEECCCCCcccCCHHHHHHHHHH--cCCCcC----------------------e------------eCCCC
Confidence 35667889999999999999999999999998 765433 1 36778
Q ss_pred cccccCchhHHHHHHHhcCCCCCCc
Q 018586 85 MNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 85 ~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
++.|...+.|..|+++|++++||+|
T Consensus 53 ~~~f~~~~~L~~H~~~H~~~~p~~C 77 (77)
T 2cot_A 53 GKAFIQRSHLIGHHRVHTGSGPSSG 77 (77)
T ss_dssp CCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred CCccCCHHHHHHHHHHhCCCCCCCC
Confidence 8889999999999999999999987
No 41
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.24 E-value=3.1e-12 Score=87.84 Aligned_cols=58 Identities=21% Similarity=0.355 Sum_probs=46.4
Q ss_pred CCceeeccccccccChHHHHHHHhhhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCccccccccccccccccCc
Q 018586 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSP 91 (353)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k~F~~~ 91 (353)
||||.|+.||++|...+.|..|+++ |+++++ | .|++||++|.+.
T Consensus 2 EKpy~C~~C~k~F~~~~~L~~H~~~--Ht~ekp----------------------~------------~C~~C~k~F~~~ 45 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDASGLSRHRRA--HLGYRP----------------------R------------SCPECGKCFRDQ 45 (60)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHH--HHTCCC----------------------E------------ECTTTCCEESSH
T ss_pred CCCccCCCCCCEeCCHHHHHHHHHH--hCCCcC----------------------e------------ECCCCCCCcCCH
Confidence 7899999999999999999999999 888765 1 355666777777
Q ss_pred hhHHHHHHHhcCCC
Q 018586 92 SSLIKHKEACSLSA 105 (353)
Q Consensus 92 s~L~~H~~~h~~~k 105 (353)
+.|..|+++|++++
T Consensus 46 ~~L~~H~~~Htgep 59 (60)
T 4gzn_C 46 SEVNRHLKVHQNKP 59 (60)
T ss_dssp HHHHHHGGGGSCC-
T ss_pred HHHHHHhCccCCCC
Confidence 77777777777653
No 42
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=99.24 E-value=5e-12 Score=93.71 Aligned_cols=80 Identities=28% Similarity=0.497 Sum_probs=69.6
Q ss_pred CCCceeecc--ccccccChHHHHHHHhhhcCCCCCC-ccc--cCcccCCChHHHHhcc---CCCCCCCCCCccccccccc
Q 018586 11 STARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCN 82 (353)
Q Consensus 11 ~~k~~~C~~--C~k~f~~~~~l~~H~~~~~h~~~~~-~C~--~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~ 82 (353)
+.++|.|+. |++.|.....|..|++. |.++++ .|. .|++.|.....|..|+ .++.+. .|+
T Consensus 2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~ 69 (89)
T 2wbs_A 2 RTATHTCDYAGCGKTYTKSSHLKAHLRT--HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF----------QCQ 69 (89)
T ss_dssp -CCCEECCSTTTCCEESSHHHHHHHHTT--SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCE----------ECS
T ss_pred CCCCeeCCCCCCCCcCCCHHHHHHHHHh--cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCc----------cCC
Confidence 457899999 99999999999999999 998888 996 6999999999999998 344433 588
Q ss_pred cccccccCchhHHHHHHHhc
Q 018586 83 LCMNIFDSPSSLIKHKEACS 102 (353)
Q Consensus 83 ~C~k~F~~~s~L~~H~~~h~ 102 (353)
.|++.|...+.|..|+++|.
T Consensus 70 ~C~~~f~~~~~l~~H~~~H~ 89 (89)
T 2wbs_A 70 KCDRAFSRSDHLALHMKRHF 89 (89)
T ss_dssp SSSCEESSHHHHHHHGGGGC
T ss_pred CCCcccCCHHHHHHHHHhhC
Confidence 89999999999999999873
No 43
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=99.22 E-value=1e-12 Score=97.69 Aligned_cols=81 Identities=17% Similarity=0.325 Sum_probs=70.0
Q ss_pred CCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhccCCCCCCCCCCccccccccccccccccC
Q 018586 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDS 90 (353)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k~F~~ 90 (353)
++||.|+.|++.|...+.|..|+++ |.++++ .|..|++.|.....|..|+..... ....|+.|++.|..
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--------~~~~c~~C~~~f~~ 70 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIRT--HTGEKPFACDICGRKFARSDERKRHRDIQHI--------LPILEDKVEELLSK 70 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHH--HHCCCCEECTTTCCEESSHHHHHHHHHHHTH--------HHHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHH--cCCCCCccCCCCCCccCCHHHHHHHHHHhCC--------CcchHHHHHHHHHH
Confidence 5799999999999999999999999 888888 999999999999999999821110 11259999999999
Q ss_pred chhHHHHHHHhc
Q 018586 91 PSSLIKHKEACS 102 (353)
Q Consensus 91 ~s~L~~H~~~h~ 102 (353)
.+.|..|++.++
T Consensus 71 ~~~L~~H~~~~h 82 (88)
T 1llm_C 71 NYHLENEVARLK 82 (88)
T ss_dssp HHHHHHHHHHHH
T ss_pred HhhhHHHHHHHH
Confidence 999999998764
No 44
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.18 E-value=2.3e-11 Score=87.11 Aligned_cols=66 Identities=29% Similarity=0.533 Sum_probs=54.6
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCcccccccccccc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCM 85 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~ 85 (353)
...++++++|+|+.|++.|.....|..|+++ |.++++ + .|+.|+
T Consensus 9 ~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~----------------------~------------~C~~C~ 52 (74)
T 2lce_A 9 SHMTHSDKPYKCDRCQASFRYKGNLASHKTV--HTGEKP----------------------Y------------RCNICG 52 (74)
T ss_dssp --CCCCCCSBCCTTSSCCBSCHHHHHHHHHH--HCCCCS----------------------E------------ECTTTC
T ss_pred ccccCCCCCeECCCCCceeCCHHHHHHHHHH--cCCCCC----------------------E------------ECCCCC
Confidence 4467788999999999999999999999998 765432 1 477788
Q ss_pred ccccCchhHHHHHHHhcCCCCC
Q 018586 86 NIFDSPSSLIKHKEACSLSAPV 107 (353)
Q Consensus 86 k~F~~~s~L~~H~~~h~~~k~~ 107 (353)
+.|...+.|..|+++|++++||
T Consensus 53 k~f~~~~~L~~H~~~H~~~kp~ 74 (74)
T 2lce_A 53 AQFNRPANLKTHTRIHSGEKPY 74 (74)
T ss_dssp CEESCHHHHHHHHHHHCCSCCC
T ss_pred chhCCHHHHHHHHHhcCCCCCC
Confidence 8999999999999999999886
No 45
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.16 E-value=1.5e-11 Score=94.00 Aligned_cols=71 Identities=15% Similarity=0.101 Sum_probs=58.2
Q ss_pred CCCCCceeeccccccccChHHHHHHHh-hhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCcccccccccccccc
Q 018586 9 KRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (353)
Q Consensus 9 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k~ 87 (353)
.+|++||.|+.|++.|...+.|..|++ . |++.. ++.++ .|+.||++
T Consensus 13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~--H~~~~---------------------~ekpf----------~C~~Cgk~ 59 (102)
T 2ghf_A 13 KKVEGGYECKYCTFQTPDLNMFTFHVDSE--HPNVV---------------------LNSSY----------VCVECNFL 59 (102)
T ss_dssp CCCCSSEECSSCSCEESCHHHHHHHHHHH--CSSCC---------------------CSCCE----------EETTTTEE
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHhh--CCCCC---------------------CCCCc----------CCCCCCcc
Confidence 468999999999999999999999997 6 64310 01112 47889999
Q ss_pred ccCchhHHHH-HHHhcCCCCCCcccC
Q 018586 88 FDSPSSLIKH-KEACSLSAPVPFEKT 112 (353)
Q Consensus 88 F~~~s~L~~H-~~~h~~~k~~~c~~~ 112 (353)
|...+.|..| +++|++++||.|..+
T Consensus 60 F~~~~~L~~H~~r~Htgekpy~C~~~ 85 (102)
T 2ghf_A 60 TKRYDALSEHNLKYHPGEENFKLTMV 85 (102)
T ss_dssp ESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred cCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence 9999999999 899999999999864
No 46
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.14 E-value=5.6e-11 Score=85.98 Aligned_cols=72 Identities=19% Similarity=0.260 Sum_probs=52.1
Q ss_pred CCCCCceeecc--ccccccChHHHHHHHh-hhcCCCCCC-ccccCcccCCChHHHHhccCCCCCCCCCCccccccccccc
Q 018586 9 KRSTARHKCVA--CYKQFKRKDHLIEHMK-ISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLC 84 (353)
Q Consensus 9 h~~~k~~~C~~--C~k~f~~~~~l~~H~~-~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C 84 (353)
++++++|.|.. |++.|.....|..|++ . |+++++ .|.. +.|
T Consensus 2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~--H~~~~~~~C~~---------------------------------~~C 46 (79)
T 2dlk_A 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQ--HIHQKSFSCPE---------------------------------PAC 46 (79)
T ss_dssp CSCCSSEECSSTTTCCEESSHHHHHHHHHHG--GGSCCCEECSC---------------------------------TTT
T ss_pred CCCCCCccCCCCCCcCccCCHHHHHHHHHHH--hCCCCCeECCC---------------------------------CCC
Confidence 46889999997 9999999999999998 6 776554 4433 116
Q ss_pred cccccCchhHHHHHHHhcCCCCCCcccCCcc
Q 018586 85 MNIFDSPSSLIKHKEACSLSAPVPFEKTLSN 115 (353)
Q Consensus 85 ~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~ 115 (353)
++.|...+.|..|+++|++++||.|+.|+..
T Consensus 47 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~ 77 (79)
T 2dlk_A 47 GKSFNFKKHLKEHMKLHSDTRDYICEFSGPS 77 (79)
T ss_dssp CCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred cCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence 6666666666666666666666666666543
No 47
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=99.12 E-value=3.5e-11 Score=88.14 Aligned_cols=74 Identities=27% Similarity=0.492 Sum_probs=66.9
Q ss_pred ceee--ccccccccChHHHHHHHhhhcCCCCCC-cccc--CcccCCChHHHHhcc---CCCCCCCCCCcccccccccc--
Q 018586 14 RHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCAV--CQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNL-- 83 (353)
Q Consensus 14 ~~~C--~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~--C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~-- 83 (353)
||.| +.|++.|.....|..|+++ |.++++ .|.. |++.|.....|..|+ .+ + .|+.
T Consensus 1 p~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~------------~C~~~~ 65 (85)
T 2j7j_A 1 MYVCHFENCGKAFKKHNQLKVHQFS--HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-Y------------PCKKDD 65 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH--HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-E------------ECCSCS
T ss_pred CccCCCCCCCcccCCHHHHHHHHHH--hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-C------------CCCCCC
Confidence 6899 9999999999999999999 888888 9988 999999999999998 33 3 4666
Q ss_pred -ccccccCchhHHHHHHHhc
Q 018586 84 -CMNIFDSPSSLIKHKEACS 102 (353)
Q Consensus 84 -C~k~F~~~s~L~~H~~~h~ 102 (353)
|++.|...+.|..|+++|+
T Consensus 66 ~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 66 SCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp SCCCEESSHHHHHHHHHHCC
T ss_pred CCCCccCCHHHHHHHHHhcC
Confidence 9999999999999999875
No 48
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=99.11 E-value=5.3e-12 Score=101.53 Aligned_cols=82 Identities=18% Similarity=0.171 Sum_probs=71.3
Q ss_pred HHhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCC
Q 018586 33 HMKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (353)
Q Consensus 33 H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~ 108 (353)
|..+ |.|+++ .|..|++.|...+.|..|+ .++.++ .|+.|+++|...+.|..|+++|++++||.
T Consensus 13 ~~~~--h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~----------~C~~C~k~F~~~~~L~~H~~~H~~~k~~~ 80 (133)
T 2lt7_A 13 YELI--VDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKY----------PCRYCEKVFPLAEYRTKHEIHHTGERRYQ 80 (133)
T ss_dssp EEEE--ETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCE----------ECSSSSCEESSHHHHHHHHHHHHTCCCEE
T ss_pred ceee--cCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCe----------eCCccCeecccccchhhhccccCCCcccc
Confidence 4455 788888 9999999999999999999 455544 58899999999999999999999999999
Q ss_pred cccCCcchhhhhhhcccc
Q 018586 109 FEKTLSNAESQKKISGAI 126 (353)
Q Consensus 109 c~~~~~~~~~~~~~~~~~ 126 (353)
|+.|+..+.....+..++
T Consensus 81 C~~C~k~F~~~~~L~~H~ 98 (133)
T 2lt7_A 81 CLACGKSFINYQFMSSHI 98 (133)
T ss_dssp ESSSCCEESSHHHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHh
Confidence 999998887777777655
No 49
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=99.11 E-value=1.9e-11 Score=83.85 Aligned_cols=47 Identities=19% Similarity=0.296 Sum_probs=42.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccCCcchhhhhhhcccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|++||++|.+.+.|..|+++|++++||.|+.|+..+...+.+..+.
T Consensus 6 ~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~ 52 (60)
T 4gzn_C 6 FCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHL 52 (60)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHG
T ss_pred cCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHh
Confidence 58999999999999999999999999999999998888777776654
No 50
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.09 E-value=1.8e-10 Score=84.56 Aligned_cols=80 Identities=20% Similarity=0.300 Sum_probs=63.1
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCcccccccccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNL 83 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~ 83 (353)
+..++|++++||.|+.|++.|.....|..|++. |..... .+.++ .|+.
T Consensus 5 ~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~--------------------~~~~~----------~C~~ 52 (86)
T 1x6h_A 5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR--YHDPNF--------------------VPAAF----------VCSK 52 (86)
T ss_dssp CCSTTCCCCCCEECSSSSCEESSHHHHHHHHHH--TTCSSC--------------------CCCCE----------ECSS
T ss_pred cccceecCCCCCcCCCCCCccCCHHHHHHHHHH--hcCCcC--------------------CCcce----------ECCC
Confidence 347789999999999999999999999999987 433210 01111 4778
Q ss_pred ccccccCchhHHHHHHHhcCCCCCCcccCCcc
Q 018586 84 CMNIFDSPSSLIKHKEACSLSAPVPFEKTLSN 115 (353)
Q Consensus 84 C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~ 115 (353)
|++.|...+.|..|+++|++++++.|..|+..
T Consensus 53 C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~ 84 (86)
T 1x6h_A 53 CGKTFTRRNTMARHADNCAGPDGVEGENSGPS 84 (86)
T ss_dssp SCCEESCHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred CCChhCCHHHHHHHHHHccCCCCcccCCCCCC
Confidence 88889999999999999999999999888754
No 51
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.03 E-value=2.1e-10 Score=81.51 Aligned_cols=66 Identities=26% Similarity=0.482 Sum_probs=53.8
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCcccccccccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNL 83 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~ 83 (353)
...+.|++++||.|+.|++.|.....|..|+++ |.++++ + .|+.
T Consensus 4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~~~----------------------~------------~C~~ 47 (72)
T 1x6e_A 4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRV--HTGEKP----------------------Y------------KCLE 47 (72)
T ss_dssp CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHG--GGCSCC----------------------E------------ECSS
T ss_pred CCCcccCCCCCccCCCCCCccCCHHHHHHHHHh--cCCCCC----------------------e------------ECCC
Confidence 457889999999999999999999999999998 776543 1 3666
Q ss_pred ccccccCchhHHHHHHHhcCCC
Q 018586 84 CMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 84 C~k~F~~~s~L~~H~~~h~~~k 105 (353)
|++.|...+.|..|+++|+++.
T Consensus 48 C~~~f~~~~~L~~H~~~H~~~~ 69 (72)
T 1x6e_A 48 CGKAFSQNSGLINHQRIHTSGP 69 (72)
T ss_dssp SCCEESSHHHHHHHHHHHHSSS
T ss_pred CCcccCCHHHHHHHHHhcCCCC
Confidence 7777888888888888887653
No 52
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.02 E-value=8.4e-11 Score=86.38 Aligned_cols=47 Identities=15% Similarity=0.158 Sum_probs=39.6
Q ss_pred ccccccccccCchhHHHHHHHhcCC----CCCCcccCCcchhhhhhhcccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLS----APVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~----k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|+.|++.|...+.|..|++.|+.+ ++|.|+.|...+.....+..+.
T Consensus 17 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~ 67 (86)
T 1x6h_A 17 ACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA 67 (86)
T ss_dssp ECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHH
T ss_pred cCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHH
Confidence 5888999999999999999988765 8999999998877777666654
No 53
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=99.01 E-value=3.1e-10 Score=80.11 Aligned_cols=66 Identities=29% Similarity=0.417 Sum_probs=54.8
Q ss_pred CCCCCCceeeccccccccChHHHHHHHhhhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCcccccccccccccc
Q 018586 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k~ 87 (353)
+|++++||.|+.|++.|.....|..|+++ |.++++ + .|+.|++.
T Consensus 3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~----------------------~------------~C~~C~~~ 46 (70)
T 1x5w_A 3 SGSSGHPEKCSECSYSCSSKAALRIHERI--HCTDRP----------------------F------------KCNYCSFD 46 (70)
T ss_dssp SCCCCCSEECSSSSCEESSHHHHHHHHGG--GCCSCS----------------------E------------ECSSSSCE
T ss_pred CCCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCC----------------------E------------eCCCCCCc
Confidence 68899999999999999999999999998 776543 1 36677788
Q ss_pred ccCchhHHHHHHHhcCCCCCCc
Q 018586 88 FDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 88 F~~~s~L~~H~~~h~~~k~~~c 109 (353)
|...+.|..|+++|++++|.+-
T Consensus 47 f~~~~~L~~H~~~h~~~~p~p~ 68 (70)
T 1x5w_A 47 TKQPSNLSKHMKKFHGDMSGPS 68 (70)
T ss_dssp ESSHHHHHHHHHHHHSSSCCSS
T ss_pred cCCHHHHHHHHHHHhCCCCCCC
Confidence 8888888888888888887653
No 54
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=98.98 E-value=2.1e-10 Score=79.92 Aligned_cols=38 Identities=18% Similarity=0.383 Sum_probs=31.4
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcC-CCCCC
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYH-SVHQP 44 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h-~~~~~ 44 (353)
+++|++++||.|+.|++.|.....|..|++.+ | +++++
T Consensus 2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~-H~~~~~~ 40 (66)
T 2drp_A 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTS-HKRNVKV 40 (66)
T ss_dssp -CEEEETTEEECTTTCCEESSHHHHHHHHHHH-SSSSCCC
T ss_pred ccccCCCcceECCCCcchhCCHHHHHHHHHHH-cCCCCcC
Confidence 46899999999999999999999999999863 4 44444
No 55
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=9.1e-10 Score=82.46 Aligned_cols=70 Identities=17% Similarity=0.261 Sum_probs=55.0
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhccCCCCCCCCCCccccccccccccccccCc
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSP 91 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k~F~~~ 91 (353)
..|.|+.|++.|.....|.+|++.+ |.++++ .+..|.. ..|+.|+++|...
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~-H~~~~~~~~~~c~~---------------------------~~C~~C~k~f~~~ 75 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTME-HVGGPEQNNHVCYW---------------------------EECPREGKSFKAK 75 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHT-TTCCTTCSCCCCCC---------------------------TTCSSTTCCCSSH
T ss_pred CCCcccccccccCCHHHHHHHHHHh-ccCCCCCCccceec---------------------------cCCCCCCcccCCH
Confidence 3466888999999999999998752 666554 3333310 1588999999999
Q ss_pred hhHHHHHHHhcCCCCCCcc
Q 018586 92 SSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 92 s~L~~H~~~h~~~k~~~c~ 110 (353)
+.|..|+++|++++||.|+
T Consensus 76 ~~L~~H~~~H~~~k~~~C~ 94 (95)
T 2ej4_A 76 YKLVNHIRVHTGEKSGPSS 94 (95)
T ss_dssp HHHHHHHHHHHTCCCCSSC
T ss_pred HHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999996
No 56
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=98.97 E-value=6e-10 Score=82.03 Aligned_cols=56 Identities=23% Similarity=0.341 Sum_probs=44.7
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (353)
...++..++|.|+.|++.|..+..|.+|+++ |+++++ .|..|++.|.++..|..|+
T Consensus 20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~--H~~~k~~~C~~C~k~F~~~~~L~~H~ 76 (85)
T 2lv2_A 20 LGLSASAECHLCPVCGESFASKGAQERHLRL--LHAAQVFPCKYCPATFYSSPGLTRHI 76 (85)
T ss_dssp CSSCCCCTTEECTTSCCEESSHHHHHHHHHT--TSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred CCCCCCCCCEECCCCCCCcCcHHHHhhhhhh--ccCCCccCCCCCCCEeCCHHHHHHhC
Confidence 3456778999999999999999999999999 888777 6666666666666666664
No 57
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=1.2e-10 Score=88.22 Aligned_cols=70 Identities=17% Similarity=0.298 Sum_probs=46.2
Q ss_pred HHHHHHHhhhcCCCCCC-ccccCcccCC-ChHHHHhcc---CC-CCCCCCCCccccccccccccccccCchhHHHHHHHh
Q 018586 28 DHLIEHMKISYHSVHQP-KCAVCQKLSK-SFESLREHL---TG-PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEAC 101 (353)
Q Consensus 28 ~~l~~H~~~~~h~~~~~-~C~~C~~~f~-~~~~l~~H~---~~-~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h 101 (353)
+.+..|+++ |.++++ .|..|++.|. ....|..|+ .+ +.++ .|+.|++.|...+.|..|+++|
T Consensus 10 ~~~~~h~~~--h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~----------~C~~C~k~F~~~~~L~~H~~~h 77 (98)
T 2gqj_A 10 GPEEQWQRA--IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDAL----------KCQHCRKQFKSKAGLNYHTMAE 77 (98)
T ss_dssp CSCSHHHHT--TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHH----------SCSSSCCCCSCHHHHHHHHHHH
T ss_pred CcHHHHHHH--hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCE----------ECCCCCCccCCHHHHHHHHHHH
Confidence 334455555 555555 5555555555 555555555 11 1111 4788999999999999999999
Q ss_pred cCCCCCCc
Q 018586 102 SLSAPVPF 109 (353)
Q Consensus 102 ~~~k~~~c 109 (353)
++++|...
T Consensus 78 ~~~kp~~~ 85 (98)
T 2gqj_A 78 HSAKPSDA 85 (98)
T ss_dssp SCSCSSCC
T ss_pred cCCCCCCC
Confidence 99998554
No 58
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=2.4e-11 Score=94.78 Aligned_cols=92 Identities=13% Similarity=0.070 Sum_probs=74.5
Q ss_pred hHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhccC--CCCCCCCCCccccccccccccccc--cCchhHHHHHHHh
Q 018586 27 KDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLT--GPLSKAHCSGIFSDRGCNLCMNIF--DSPSSLIKHKEAC 101 (353)
Q Consensus 27 ~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~--~~~~c~~Cgk~f~~~~C~~C~k~F--~~~s~L~~H~~~h 101 (353)
.+.|..|+++ |+++++ .|..|++.|.....|..|+. +...+..+ ..|+.|++.| ...+.|..|+++|
T Consensus 4 ~~~l~~H~~~--H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~------~~C~~C~~~f~f~~~~~l~~H~~~H 75 (115)
T 2dmi_A 4 GSSGKLYGSI--FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNH------ETDNNNPKRWSKPRKRSLLEMEGKE 75 (115)
T ss_dssp CCCCCCCCCC--CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCC------CCCCCCCSCCSSCCCCCCCCCCCSC
T ss_pred chhhhhheee--eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCC------ccCCCCCcccccccHHHHHHHhhcc
Confidence 3457788988 999999 99999999999999999982 23222111 1388999988 8999999999999
Q ss_pred cCCCCCCcccCCcchhhhhhhcccc
Q 018586 102 SLSAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 102 ~~~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
++++||.|+.|+..+.....+..+.
T Consensus 76 ~~~~~~~C~~C~k~f~~~~~L~~H~ 100 (115)
T 2dmi_A 76 DAQKVLKCMYCGHSFESLQDLSVHM 100 (115)
T ss_dssp CCCSSCBCSSSCCBCSSHHHHHHHH
T ss_pred CCCcceECCCCCCccCCHHHHHHHH
Confidence 9999999999998877777666554
No 59
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.93 E-value=1e-09 Score=78.91 Aligned_cols=64 Identities=16% Similarity=0.290 Sum_probs=50.1
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHh-hhcCCCC-CCccccCcccCCChHHHHhccCCCCCCCCCCcccccccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVH-QPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGC 81 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C 81 (353)
+..++|++++||.|+.|++.|.....|..|++ . |.++ ++ + .|
T Consensus 5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~--h~~~~~~----------------------~------------~C 48 (77)
T 2ct1_A 5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQK--HTENVAK----------------------F------------HC 48 (77)
T ss_dssp CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHH--SSSSCSS----------------------E------------EC
T ss_pred ccccccCCCCCeECCCcCchhCCHHHHHHHHHHh--cCCCCCc----------------------c------------CC
Confidence 45789999999999999999999999999997 5 6643 22 1 36
Q ss_pred ccccccccCchhHHHHHHHhcC
Q 018586 82 NLCMNIFDSPSSLIKHKEACSL 103 (353)
Q Consensus 82 ~~C~k~F~~~s~L~~H~~~h~~ 103 (353)
+.|++.|...+.|..|+++|++
T Consensus 49 ~~C~~~f~~~~~L~~H~~~~H~ 70 (77)
T 2ct1_A 49 PHCDTVIARKSDLGVHLRKQHS 70 (77)
T ss_dssp SSSSCEESSHHHHHHHHHHTSC
T ss_pred CCCCCccCCHHHHHHHHHHhCC
Confidence 6677777777888888877553
No 60
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=98.93 E-value=4.4e-10 Score=88.53 Aligned_cols=74 Identities=20% Similarity=0.351 Sum_probs=60.4
Q ss_pred CC-ccc--cCcccCCChHHHHhccC--CCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCCccc--CCcc
Q 018586 43 QP-KCA--VCQKLSKSFESLREHLT--GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK--TLSN 115 (353)
Q Consensus 43 ~~-~C~--~C~~~f~~~~~l~~H~~--~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~--~~~~ 115 (353)
++ .|. .|++.|.....|..|+. ++.+. .|+.|++.|...+.|..|+++|+++++|.|+. |+..
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~----------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~ 73 (124)
T 1ubd_C 4 RTIACPHKGCTKMFRDNSAMRKHLHTHGPRVH----------VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKR 73 (124)
T ss_dssp -CEECCSTTCCCEESSHHHHHHHHGGGSCCCE----------ECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCE
T ss_pred CcccCCCCCCcCccCCHHHHHHHHHHcCCCCe----------ECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCc
Confidence 45 888 89999999999999982 22222 58999999999999999999999999999974 9877
Q ss_pred hhhhhhhcccc
Q 018586 116 AESQKKISGAI 126 (353)
Q Consensus 116 ~~~~~~~~~~~ 126 (353)
+.....+..+.
T Consensus 74 f~~~~~l~~H~ 84 (124)
T 1ubd_C 74 FSLDFNLRTHV 84 (124)
T ss_dssp ESCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 76666666554
No 61
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=98.91 E-value=1.3e-09 Score=81.73 Aligned_cols=78 Identities=24% Similarity=0.355 Sum_probs=65.3
Q ss_pred CCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCCcccCCc
Q 018586 39 HSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLS 114 (353)
Q Consensus 39 h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~ 114 (353)
+.++++ .|..|++.|.....|..|+ .+..++ .|+.|++.|.....|..|+++|+++++|.|+.|..
T Consensus 3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~ 72 (96)
T 2dmd_A 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPY----------KCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPY 72 (96)
T ss_dssp CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSE----------ECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSC
T ss_pred CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCE----------eCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCC
Confidence 456677 9999999999999999998 223332 58899999999999999999999999999999998
Q ss_pred chhhhhhhcccc
Q 018586 115 NAESQKKISGAI 126 (353)
Q Consensus 115 ~~~~~~~~~~~~ 126 (353)
.+.....+..+.
T Consensus 73 ~f~~~~~l~~H~ 84 (96)
T 2dmd_A 73 ASRNSSQLTVHL 84 (96)
T ss_dssp EESSHHHHHHHH
T ss_pred ccCCHHHHHHHH
Confidence 877766665544
No 62
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=5.2e-10 Score=80.72 Aligned_cols=69 Identities=20% Similarity=0.356 Sum_probs=52.0
Q ss_pred CCCCCCceeeccccccccChHHHHHHHhhhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCcccccccccccccc
Q 018586 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNI 87 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k~ 87 (353)
+|++++||.|+.|++.|.....|..|+++ |.+.. ++.++ .|+.|++.
T Consensus 1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~~---------------------~~~~~----------~C~~C~k~ 47 (78)
T 2d9h_A 1 GSSGSSGLQCEICGFTCRQKASLNWHQRK--HAETV---------------------AALRF----------PCEFCGKR 47 (78)
T ss_dssp CCCSCCCEECSSSCCEESSHHHHHHHHHH--HHHHT---------------------TTCCE----------ECTTTCCE
T ss_pred CCCCCcCeECCCCCCeeCCHHHHHHHHHH--hhccC---------------------CCccc----------CCCCCCch
Confidence 58999999999999999999999999998 65410 01111 46778888
Q ss_pred ccCchhHHHHHH-HhcCCCCCCc
Q 018586 88 FDSPSSLIKHKE-ACSLSAPVPF 109 (353)
Q Consensus 88 F~~~s~L~~H~~-~h~~~k~~~c 109 (353)
|...+.|..|++ .|.++++...
T Consensus 48 f~~~~~L~~H~~~~H~~~~~~~~ 70 (78)
T 2d9h_A 48 FEKPDSVAAHRSKSHPALLLAPQ 70 (78)
T ss_dssp ESSHHHHHHHHHHTSTTTSSCCS
T ss_pred hCCHHHHHHHHHHhCCCCCCCcc
Confidence 888888888984 4666666443
No 63
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=98.88 E-value=1.5e-09 Score=89.08 Aligned_cols=86 Identities=16% Similarity=0.242 Sum_probs=71.0
Q ss_pred CCCC-ccccCcccCCChHHHHhcc-C---C--C--------CCCCCCCcccccc----------------cccc--cccc
Q 018586 41 VHQP-KCAVCQKLSKSFESLREHL-T---G--P--------LSKAHCSGIFSDR----------------GCNL--CMNI 87 (353)
Q Consensus 41 ~~~~-~C~~C~~~f~~~~~l~~H~-~---~--~--------~~c~~Cgk~f~~~----------------~C~~--C~k~ 87 (353)
.... .|..|++.|.....|..|+ . + + +.|..|++.|... .|+. |++.
T Consensus 22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~ 101 (155)
T 2rpc_A 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI 101 (155)
T ss_dssp TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence 3444 9999999999999999998 1 1 1 6799999999865 3987 9999
Q ss_pred ccCchhHHHHHHHhcCCCCCCccc--CCcchhhhhhhcccc
Q 018586 88 FDSPSSLIKHKEACSLSAPVPFEK--TLSNAESQKKISGAI 126 (353)
Q Consensus 88 F~~~s~L~~H~~~h~~~k~~~c~~--~~~~~~~~~~~~~~~ 126 (353)
|...+.|..|+++|++++||.|+. |+..+.....+..+.
T Consensus 102 f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~ 142 (155)
T 2rpc_A 102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142 (155)
T ss_dssp ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSS
T ss_pred cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHH
Confidence 999999999999999999999986 887776666666554
No 64
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.87 E-value=1.3e-09 Score=82.21 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=60.0
Q ss_pred ccccChHHHHHHHhhhcCCCCCC-ccccCcccC-CChHHHHhcc--CCCCCCCCCCccccccccccccccccCchhHHHH
Q 018586 22 KQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLS-KSFESLREHL--TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKH 97 (353)
Q Consensus 22 k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f-~~~~~l~~H~--~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H 97 (353)
..|...+.+..|++. |.++++ .|..|++.| .....|..|+ .++.++ .|.+|+++|...+.|..|
T Consensus 14 ~~~~~~~~~~~~~~~--~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~----------~C~~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 14 PVYAAGSLEEQWYLE--IVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMF----------TCHHCGKQLRSLAGMKYH 81 (96)
T ss_dssp CSSCTTCHHHHHHHH--HHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCC----------CCSSSCCCCSSHHHHHHH
T ss_pred CCCCCchHHHHHHHH--hcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCe----------ECCCCCCeeCCHHHHHHH
Confidence 356777888888888 777788 999999999 8999999998 233333 588899999999999999
Q ss_pred -HHHhcCCCCCC
Q 018586 98 -KEACSLSAPVP 108 (353)
Q Consensus 98 -~~~h~~~k~~~ 108 (353)
+++|+++..++
T Consensus 82 ~~~~H~~~p~~~ 93 (96)
T 2ctd_A 82 VMANHNSLPSGP 93 (96)
T ss_dssp HHHHTCCCSSCS
T ss_pred hHHhcCCCCCCC
Confidence 99998655444
No 65
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=98.87 E-value=7.7e-10 Score=74.53 Aligned_cols=50 Identities=30% Similarity=0.573 Sum_probs=33.7
Q ss_pred CCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhc
Q 018586 11 STARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH 62 (353)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H 62 (353)
|++||.|+.|++.|.....|..|+++ |.++++ .|..|++.|.....|..|
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H 51 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLNIHLRT--HTGEKPYKCEFCEYAAAQKTSLRYH 51 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHHHHHHH--HHCCCCEECSSSSCEESSHHHHHHH
T ss_pred CCCCccCCCCcchhCChHHHHHHHHH--cCCCCCcCCCCCcchhCCHHHHHHH
Confidence 46899999999999999999999998 777665 554444444444444444
No 66
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.85 E-value=8.7e-10 Score=85.02 Aligned_cols=77 Identities=17% Similarity=0.241 Sum_probs=65.6
Q ss_pred CCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCCcccCCc
Q 018586 39 HSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLS 114 (353)
Q Consensus 39 h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~ 114 (353)
|+++++ .| .|++.|.....|..|+ .+..++ .|+.|++.|.....|..|+++|+++++|.|+.|..
T Consensus 5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~ 73 (110)
T 2csh_A 5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPY----------GCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAK 73 (110)
T ss_dssp CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSE----------ECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCC
T ss_pred CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCc----------cCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcc
Confidence 888888 99 8999999999999998 333333 58899999999999999999999999999999987
Q ss_pred chhhhhhhcccc
Q 018586 115 NAESQKKISGAI 126 (353)
Q Consensus 115 ~~~~~~~~~~~~ 126 (353)
.+.....+..++
T Consensus 74 ~f~~~~~l~~H~ 85 (110)
T 2csh_A 74 RFMWRDSFHRHV 85 (110)
T ss_dssp EESCHHHHHHHH
T ss_pred hhcCHHHHHHHH
Confidence 766666665544
No 67
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=98.85 E-value=1.9e-09 Score=76.54 Aligned_cols=61 Identities=25% Similarity=0.569 Sum_probs=48.6
Q ss_pred CCCCCCCCCCCCCceeec--cccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc
Q 018586 1 MDTEAELPKRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (353)
Q Consensus 1 ~~~~~~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (353)
|++.....|+++++|.|+ .|++.|.....|..|+++ |.++++ .|..|++.|.....|..|+
T Consensus 6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 69 (73)
T 1f2i_G 6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI--HTGQKPFQCRICMRNFSRSDHLTTHI 69 (73)
T ss_dssp --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHH--HHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHh--hCCCCCeECCCCCchhCCHHHHHHHH
Confidence 456667889999999997 699999999999999999 887776 7777776666666666664
No 68
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.85 E-value=3.1e-09 Score=70.92 Aligned_cols=49 Identities=33% Similarity=0.527 Sum_probs=44.1
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHh-hhcCCCCCC-ccccCcccCCC
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP-KCAVCQKLSKS 55 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~h~~~~~-~C~~C~~~f~~ 55 (353)
...+|++++||.|+.|++.|.....|.+|++ + |+++++ .|..|++.|.+
T Consensus 3 ~~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~--H~~~k~~~C~~C~k~F~~ 53 (54)
T 2eps_A 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQV--HTSERPHKCQVWVSGPSS 53 (54)
T ss_dssp CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHT--SCCCCCCCSSSSCCSSCC
T ss_pred CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHh--cCCCCCccCCCCCCCCCC
Confidence 3457889999999999999999999999997 8 999888 99999998876
No 69
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=1.1e-11 Score=88.21 Aligned_cols=68 Identities=18% Similarity=0.126 Sum_probs=47.8
Q ss_pred HHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhccCCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCC
Q 018586 29 HLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPV 107 (353)
Q Consensus 29 ~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~ 107 (353)
.|..|+++ |.++++ .|..|++.|.....|.. .+++ .|+.|++.|...+.|..|+++|++++||
T Consensus 5 ~l~~H~~~--h~~~~~~~C~~C~k~f~~~~~l~~--~~~~------------~C~~C~~~f~~~~~l~~H~~~H~~~~~~ 68 (73)
T 2ctu_A 5 SSGKRQKI--HLGDRSQKCSKCGIIFIRRSTLSR--RKTP------------MCEKCRKDSCQEAALNKDEGNESGKKTS 68 (73)
T ss_dssp SCCCCCCC--CCCCSEEECSSSCCEEECCCCCCC--SSSC------------CCHHHHHTCSCCCSSCCCSSCCCCCCCS
T ss_pred hHHHHHHH--hCCCCCeeCCcccchhCCHHHhCc--CCCC------------CCCCCChhhcCHHHHHHHHHhhcCCCCC
Confidence 34455555 555555 66666666555544433 1122 5889999999999999999999999999
Q ss_pred CcccC
Q 018586 108 PFEKT 112 (353)
Q Consensus 108 ~c~~~ 112 (353)
.|+.|
T Consensus 69 ~C~~C 73 (73)
T 2ctu_A 69 GPSSG 73 (73)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 99865
No 70
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=98.82 E-value=5.6e-10 Score=88.74 Aligned_cols=80 Identities=19% Similarity=0.225 Sum_probs=53.5
Q ss_pred CCceeecccccccc------ChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhccC-CCCCCCCCCcccccccccc
Q 018586 12 TARHKCVACYKQFK------RKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLT-GPLSKAHCSGIFSDRGCNL 83 (353)
Q Consensus 12 ~k~~~C~~C~k~f~------~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~-~~~~c~~Cgk~f~~~~C~~ 83 (353)
++++.|+.|++.|. ....|..|+ . |+++++ .|..|++.|.....|..|+. -..++ .|+.
T Consensus 39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~--h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~----------~C~~ 105 (129)
T 2wbt_A 39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-A--SKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK----------VCPV 105 (129)
T ss_dssp HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-H--HHHHCSEECTTTCCEESSHHHHHHHHHHTCCCC----------BCTT
T ss_pred hCcccchhhhcccCCCcccCCHHHHHHHH-H--hCCCCCeECCCCCcccCCHhHHHHHHHHCCCCC----------CCCC
Confidence 34556666665554 445555565 3 556666 78888888888877777771 12222 4777
Q ss_pred ccccccCchhHHHHHHHhcCC
Q 018586 84 CMNIFDSPSSLIKHKEACSLS 104 (353)
Q Consensus 84 C~k~F~~~s~L~~H~~~h~~~ 104 (353)
|+++|...+.|..|+++|++.
T Consensus 106 C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 106 CKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp TCCBCSSHHHHHHHHHHTTCC
T ss_pred CCcccCCHHHHHHHHHHHCCc
Confidence 888888888888888888765
No 71
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=98.82 E-value=2.2e-09 Score=80.26 Aligned_cols=77 Identities=19% Similarity=0.323 Sum_probs=64.7
Q ss_pred CCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCC--CCCCcccCC
Q 018586 40 SVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLS--APVPFEKTL 113 (353)
Q Consensus 40 ~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~--k~~~c~~~~ 113 (353)
+++++ .|..|++.|.....|..|+ .++.++ .|+.|++.|...+.|..|+++|+++ ++|.|+.|.
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~ 72 (95)
T 2yt9_A 3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPY----------SCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCG 72 (95)
T ss_dssp CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSE----------ECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSC
T ss_pred CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCC----------cCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCcc
Confidence 56677 9999999999999999998 333333 5889999999999999999999987 999999998
Q ss_pred cchhhhhhhcccc
Q 018586 114 SNAESQKKISGAI 126 (353)
Q Consensus 114 ~~~~~~~~~~~~~ 126 (353)
..+.....+..++
T Consensus 73 ~~f~~~~~L~~H~ 85 (95)
T 2yt9_A 73 KGFSRPDHLNGHI 85 (95)
T ss_dssp CCBSSHHHHHHHH
T ss_pred chhCCHHHHHHHH
Confidence 8877776666554
No 72
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.81 E-value=2.7e-09 Score=75.21 Aligned_cols=47 Identities=15% Similarity=0.234 Sum_probs=41.3
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccCCcchhhhhhhcccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|+.|++.|...+.|..|+++|++++||.|+.|...+.....+..+.
T Consensus 11 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~ 57 (70)
T 1x5w_A 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM 57 (70)
T ss_dssp ECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHH
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHH
Confidence 58999999999999999999999999999999998877766665544
No 73
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.81 E-value=3.5e-09 Score=76.28 Aligned_cols=47 Identities=15% Similarity=0.149 Sum_probs=40.2
Q ss_pred ccccccccccCchhHHHHHH-HhcCCCCCCccc--CCcchhhhhhhcccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKE-ACSLSAPVPFEK--TLSNAESQKKISGAI 126 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~-~h~~~k~~~c~~--~~~~~~~~~~~~~~~ 126 (353)
.|+.|++.|...+.|..|++ .|.+++||.|+. |+..+.....+..+.
T Consensus 11 ~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~ 60 (79)
T 2dlk_A 11 DFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60 (79)
T ss_dssp SSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHH
T ss_pred CCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHH
Confidence 35679999999999999999 699999999998 988877777766654
No 74
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=4.5e-09 Score=67.44 Aligned_cols=45 Identities=22% Similarity=0.350 Sum_probs=41.3
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
|+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eml_A 1 GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI--HSGKKPSGPSSG 46 (46)
T ss_dssp CCCCCCCSSCCSEECSSSCCEESSHHHHHHHHGG--GSSCCCSCSSCC
T ss_pred CCccCCcCCCCCeeCCCcCCccCCHHHHHHHHHH--hcCCCCCCCCCC
Confidence 4567899999999999999999999999999999 999888 98876
No 75
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=4.5e-09 Score=67.46 Aligned_cols=45 Identities=22% Similarity=0.283 Sum_probs=41.5
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 ~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ysp_A 1 GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV--HTGERPSGPSSG 46 (46)
T ss_dssp CCCCCCCSSCCSEEETTTTEEESCHHHHHHHHTT--SCSCCSSCCSCC
T ss_pred CCCCcCCCCCCCeECCCCCCccCCHHHHHHHHHh--hCCCCCCCCCCC
Confidence 4567899999999999999999999999999999 999888 98877
No 76
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.81 E-value=3.8e-09 Score=67.83 Aligned_cols=45 Identities=18% Similarity=0.229 Sum_probs=41.3
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..+.|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2elz_A 1 GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV--HMGEKTSGPSSG 46 (46)
T ss_dssp CCCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGG--GGSCCCCCSCCC
T ss_pred CCCCCCCCCCCCeeCcccCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3567899999999999999999999999999999 999888 98877
No 77
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=98.81 E-value=3.5e-09 Score=67.99 Aligned_cols=45 Identities=27% Similarity=0.408 Sum_probs=41.5
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ely_A 1 GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKL--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHH--HSCCSSCSCCCC
T ss_pred CCCCCCCCCCCCcccCccCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4567899999999999999999999999999999 999888 99877
No 78
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=98.80 E-value=5.2e-09 Score=67.10 Aligned_cols=45 Identities=20% Similarity=0.362 Sum_probs=41.4
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em9_A 1 GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRV--HSGEKPSGPSSG 46 (46)
T ss_dssp CCSCCSCCCCCSEECSSSCCEESSHHHHHHHGGG--GTSCCCCSTTCC
T ss_pred CCCCCCCCCCcCeECCccccccCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 4567899999999999999999999999999999 999888 98876
No 79
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.80 E-value=5.1e-09 Score=67.19 Aligned_cols=44 Identities=23% Similarity=0.360 Sum_probs=40.8
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ene_A 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTT--TCCCCCCSCCCC
T ss_pred CcccCCCCCCCeECCCCCchhCChHHHHHHHhh--cCCCCCCCCCCC
Confidence 557899999999999999999999999999999 999888 99877
No 80
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.80 E-value=4.6e-09 Score=67.41 Aligned_cols=45 Identities=20% Similarity=0.291 Sum_probs=41.4
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2en6_A 1 GSSGSSGSGEKPYGCNECGKTFSQKSILSAHQRT--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSCCCCSSCCEEETTTTEEESSHHHHHHHHHH--HSSCCCSSSCCC
T ss_pred CCCCCccCCCcCeECCCCCcccCchHHHHHHHHH--cCCCCCCCCCCC
Confidence 3567899999999999999999999999999999 999888 99876
No 81
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=6.2e-09 Score=66.79 Aligned_cols=44 Identities=20% Similarity=0.292 Sum_probs=40.9
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2enc_A 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS--HSGEKPSGPSSG 46 (46)
T ss_dssp CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHH--SCCSSCCSSCCC
T ss_pred CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 457899999999999999999999999999999 999988 99877
No 82
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=5e-09 Score=67.23 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=41.3
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2em7_A 1 GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMV--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSSSCCCSEECSSSCCEESCHHHHHHHGGG--GTTCCCSSTTCC
T ss_pred CCCCCCCCCCcCccCCCccchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3567899999999999999999999999999999 999888 98876
No 83
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.80 E-value=4.6e-09 Score=67.41 Aligned_cols=45 Identities=24% Similarity=0.375 Sum_probs=41.2
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emy_A 1 GSSGSSGTGENPYECHECGKAFSRKYQLISHQRT--HAGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCCCSSCCEECSSSCCEESSHHHHHHHHHH--HTTSCCSCSSCC
T ss_pred CCCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4567899999999999999999999999999999 999888 88876
No 84
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=98.79 E-value=4.4e-09 Score=67.53 Aligned_cols=45 Identities=22% Similarity=0.427 Sum_probs=41.2
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emk_A 1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHH--HSSCCCSSCCCC
T ss_pred CCCCCccCCCCceECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4567899999999999999999999999999999 999888 98876
No 85
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.79 E-value=4.9e-09 Score=67.31 Aligned_cols=45 Identities=27% Similarity=0.350 Sum_probs=41.2
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytq_A 1 GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT--HSGEKPSGPSSG 46 (46)
T ss_dssp CCCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTT--TCCSCSSCCCCC
T ss_pred CCCCcCcCCCCCcCCCccChhhCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 3567899999999999999999999999999999 999888 98876
No 86
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=98.79 E-value=3.8e-09 Score=80.69 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=64.0
Q ss_pred CCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCCcccCCcc
Q 018586 40 SVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSN 115 (353)
Q Consensus 40 ~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~ 115 (353)
..+++ .|..|++.|.....|..|+ .+..++ .|+.|++.|.....|..|+++|+++++|.|+.|...
T Consensus 13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~ 82 (106)
T 2ee8_A 13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPY----------TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKG 82 (106)
T ss_dssp CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCC----------BCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCC
T ss_pred CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCc----------CCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCc
Confidence 34556 9999999999999999998 333333 588899999999999999999999999999999887
Q ss_pred hhhhhhhcccc
Q 018586 116 AESQKKISGAI 126 (353)
Q Consensus 116 ~~~~~~~~~~~ 126 (353)
+.....+..+.
T Consensus 83 f~~~~~L~~H~ 93 (106)
T 2ee8_A 83 FCQSRTLAVHK 93 (106)
T ss_dssp CSSHHHHHHHH
T ss_pred ccCHHHHHHHH
Confidence 77666665544
No 87
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=98.78 E-value=6.6e-09 Score=66.58 Aligned_cols=44 Identities=23% Similarity=0.328 Sum_probs=40.7
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2el4_A 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS--HTGVKPSGPSSG 46 (46)
T ss_dssp CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGG--SSSCCCSCCTTC
T ss_pred ccccCCCCCCceECCCCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 457889999999999999999999999999999 999988 98876
No 88
>4hec_A Putative uncharacterized protein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, unknown; 1.80A {Mycobacterium tuberculosis}
Probab=98.78 E-value=3.5e-08 Score=83.12 Aligned_cols=154 Identities=16% Similarity=0.183 Sum_probs=93.2
Q ss_pred CCCceeeccCccccccCCCCccceeEEeeecCCCCeEEeeec--cCCCCcccccc-c-cCCCCHhhhcCCCChHHHHHHH
Q 018586 133 RGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYV--QPQLPVTNYRY-E-VTGLTEEDIKNAMPLKEVKDKI 208 (353)
Q Consensus 133 ~~~~~~~~D~Ettg~~~~~~~~il~~v~ivd~~g~~~~~~lv--~P~~~i~~~~~-~-~~GIt~e~l~~~~~~~~v~~~~ 208 (353)
..+.-+++|||+|+.+. .+++ ..+.+|.++|...|.... .|.. +.++.. . +.++.........++.++..+|
T Consensus 20 ~~m~r~FlDTEFt~d~~--~~eL-ISIGlV~EdGrEFYav~~d~d~~~-~~~wVr~~Vlp~L~~~~~~~~~s~~~i~~~L 95 (190)
T 4hec_A 20 GSMVRYFYDTEFIEDGH--TIEL-ISIGVVAEDGREYYAVSTEFDPER-AGSWVRTHVLPKLPPPASQLWRSRQQIRLDL 95 (190)
T ss_dssp -CEEEEEEEEEEEECSS--CEEE-EEEEEEETTSCEEEEEETTSCGGG-CCHHHHHHTGGGSCCTTSTTEECHHHHHHHH
T ss_pred CceeEEEEeeeecCCCC--CCCE-EEEEEEcCCCCEEEEEecCCChhh-CcHHHHhccccCCCCCcccccCCHHHHHHHH
Confidence 34456899999998432 3445 477777899987665443 2332 233332 2 3666654455567999999999
Q ss_pred HHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhcCcCCCCceeecccccCCcccCCCCCcHHHHHHHHhCCc-C---C
Q 018586 209 LEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYD-I---Q 284 (353)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~-~---~ 284 (353)
.+||.... .....|++|+..+|..+|..-+.. +.+ +.+.+ |. ....|..+.+.. |.+ + .
T Consensus 96 ~~FL~~~~---------~~~~eLwa~~~~yD~~~L~ql~g~--m~~---lP~~~-p~-~~~dlr~~~~~~-g~~~lp~~~ 158 (190)
T 4hec_A 96 EEFLRIDG---------TDSIELWAWVGAYDHVALCQLWGP--MTA---LPPTV-PR-FTRELRQLWEDR-GCPRMPPRP 158 (190)
T ss_dssp HHHTTTTS---------SCEEEEEESSCHHHHHHHHTTTSS--GGG---SCTTS-CS-SCEEHHHHHHHT-TCCCCCC--
T ss_pred HHHHHhcC---------CCCCEEEEecccccHHHHHHHhcc--ccc---CCccc-ch-hhHHHHHHHHHc-CCCCCCCCC
Confidence 99993221 123469999999999999833221 111 11111 10 123466666655 443 1 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHhc
Q 018586 285 SGVHDPYEDCVSVMRLYKRFRRQ 307 (353)
Q Consensus 285 ~~~H~Al~Da~~t~~l~~~~~~~ 307 (353)
.+.|+||.||+..+..|+.+...
T Consensus 159 ~~~H~AL~DAR~n~~~~~~~~~~ 181 (190)
T 4hec_A 159 RDVHDALVDARDQLRRFRLITST 181 (190)
T ss_dssp ---CCHHHHHHHHHHHHHHHHC-
T ss_pred CCCcCcHHHHHHHHHHHHHHhCc
Confidence 22799999999999999998765
No 89
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=98.78 E-value=5.6e-09 Score=66.99 Aligned_cols=45 Identities=29% Similarity=0.434 Sum_probs=41.1
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ema_A 1 GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCSCSSCTTSCCEECSSSCCEESSHHHHHHHHTG--GGCCCCCSSSCC
T ss_pred CCCccCCCCCcCcCCCCCcchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3567899999999999999999999999999999 999888 98876
No 90
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.78 E-value=6.7e-09 Score=66.62 Aligned_cols=44 Identities=25% Similarity=0.384 Sum_probs=40.6
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
...++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytn_A 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGG--TSCCCCCSCCCC
T ss_pred CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhh--cCCCCCCCCCCC
Confidence 457889999999999999999999999999999 999988 98876
No 91
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.78 E-value=5.5e-09 Score=66.99 Aligned_cols=45 Identities=22% Similarity=0.240 Sum_probs=41.2
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eov_A 1 GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC--HTGERHSGPSSG 46 (46)
T ss_dssp CCCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHH--HSCCSSCCSCCC
T ss_pred CCCCCCCCCCCCccCCccChhhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 4567899999999999999999999999999999 998888 88876
No 92
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.78 E-value=6.6e-09 Score=66.61 Aligned_cols=44 Identities=25% Similarity=0.402 Sum_probs=40.6
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
...++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eoe_A 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRI--HTGVKPSGPSSG 46 (46)
T ss_dssp CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGG--GSCCCSCSSCCC
T ss_pred CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 457889999999999999999999999999999 999888 99876
No 93
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.77 E-value=5.3e-09 Score=67.07 Aligned_cols=45 Identities=22% Similarity=0.364 Sum_probs=41.2
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytr_A 1 GSSGSSGTGEKPYKCNECGKAFSQTSKLARHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTT--TTTCSCCCSCCC
T ss_pred CCCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3567899999999999999999999999999999 999888 98877
No 94
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.77 E-value=7.9e-09 Score=66.27 Aligned_cols=44 Identities=25% Similarity=0.416 Sum_probs=40.6
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ytj_A 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKI--HTKQKPSGPSSG 46 (46)
T ss_dssp CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHH--TSCCCCSSCSCC
T ss_pred CcccCCCCCcCeECCCCChhhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 557889999999999999999999999999999 999888 88876
No 95
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.77 E-value=6e-09 Score=66.85 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=41.4
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
|+..+.|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2yso_A 1 GSSGSSGSREKSHQCRECGEIFFQYVSLIEHQVL--HMGQKNSGPSSG 46 (46)
T ss_dssp CCCSCCSSCCCCEECTTTCCEESSHHHHHHHHHH--HSCCSCCCTTCC
T ss_pred CCcccccCCCCCEEccccChhhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 4567899999999999999999999999999999 999888 98876
No 96
>2kfn_A Klenow fragment of DNA polymerase I; complex (polymerase/DNA), exonuclease, transferase, transferase/DNA complex; HET: US1; 2.03A {Escherichia coli} SCOP: c.55.3.5 e.8.1.1 PDB: 1d9f_A* 1d9d_A* 1krp_A* 1ksp_A* 1qsl_A* 1kfs_A* 2kfz_A* 2kzm_A* 2kzz_A* 1dpi_A* 1kfd_A* 1kln_A* 1d8y_A*
Probab=98.77 E-value=3.2e-08 Score=98.97 Aligned_cols=145 Identities=15% Similarity=0.144 Sum_probs=100.6
Q ss_pred ceeeccCccccccCCCCccceeEEeeecCCCCeEEeeeccCCCCccccccccCCCCHhhhcCCCChHHHHHHHHHHHhcC
Q 018586 136 KAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNG 215 (353)
Q Consensus 136 ~~~~~D~Ettg~~~~~~~~il~~v~ivd~~g~~~~~~lv~P~~~i~~~~~~~~GIt~e~l~~~~~~~~v~~~~~~~~~~~ 215 (353)
.++++|+||||.++... ++ ..+.++...|+.. ||.+.. . +++ +.+++++.++++.|.+|+
T Consensus 27 ~~va~DtEttgl~~~~~-~i-v~I~~~~~~g~~~---yip~~~------~---~~~---~~~~l~~~~vl~~L~~~L--- 86 (605)
T 2kfn_A 27 PVFAFDTETDSLDNISA-NL-VGLSFAIEPGVAA---YIPVAH------D---YLD---APDQISRERALELLKPLL--- 86 (605)
T ss_dssp SSEEEEEEESCSCTTTC-CE-EEEEEEEETTEEE---EEECCC------C---STT---CCCCCCHHHHHHHHHHHH---
T ss_pred CeEEEEEecCCCCcccC-ce-EEEEEEEcCCcEE---EEeccc------c---ccc---cccccCHHHHHHHHHHHH---
Confidence 68999999999864211 22 2333332345433 331111 0 111 234567899999999999
Q ss_pred CCCcccccCCCCCcEEEecccHHHHHHhc---CcCCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcCC-------C
Q 018586 216 ESTGRLMLDDGKARLLVGHGLEHDLDSLR---MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQ-------S 285 (353)
Q Consensus 216 ~~~~~~~~~~~~~~~lvgh~~~~D~~~l~---~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~-------~ 285 (353)
.+.+.++|+||+.||+.+|. +..+ ..++||+..+..+.|...+++|+.|++.|+|+... .
T Consensus 87 ---------~d~~i~kV~hnak~D~~~L~~~Gi~l~-~~~~DT~laayLL~p~~~~~~L~~La~~~Lg~~~i~~~~~~gK 156 (605)
T 2kfn_A 87 ---------EDEKALKVGQNLKYDRGILANYGIELR-GIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGK 156 (605)
T ss_dssp ---------TCTTSCEEESSHHHHHHHHHTTTCCCC-CEEEEHHHHHHHHCTTSSCCSHHHHHHHHSCCCCCCHHHHHCS
T ss_pred ---------cCCCCeEEEECcHHHHHHHHHCCCCCC-CccccHHHHHHHhCCCCCCCCHHHHHHHhcCCCcccHHHHhCC
Confidence 22345899999999999997 2222 35799999999988877789999999999876531 0
Q ss_pred -----C--C-------CChHHHHHHHHHHHHHHHhchhh
Q 018586 286 -----G--V-------HDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 286 -----~--~-------H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
. . |.|..||.++++||..+..+..+
T Consensus 157 g~~~~~~~~~~le~~~~yAa~Da~~~~~L~~~L~~~L~~ 195 (605)
T 2kfn_A 157 GKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQK 195 (605)
T ss_dssp STTCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 45889999999999999876544
No 97
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=98.77 E-value=1.9e-09 Score=78.13 Aligned_cols=71 Identities=20% Similarity=0.292 Sum_probs=59.6
Q ss_pred ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCCcccCCcchhhhhh
Q 018586 45 KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKK 121 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~~~~ 121 (353)
.|..|++.|.....|..|+ .+..++ .|+.|++.|...+.|..|+++|++++||.|+.|+..+.....
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~ 72 (82)
T 2kmk_A 3 DCKICGKSFKRSSTLSTHLLIHSDTRPY----------PCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSN 72 (82)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHTCCCE----------ECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHH
T ss_pred cCCCCcccccCchhHHHHHHHcCCCCCe----------eCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHH
Confidence 7999999999999999998 333333 588899999999999999999999999999999877666655
Q ss_pred hccc
Q 018586 122 ISGA 125 (353)
Q Consensus 122 ~~~~ 125 (353)
+..+
T Consensus 73 l~~H 76 (82)
T 2kmk_A 73 LITH 76 (82)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 98
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.77 E-value=7.5e-09 Score=66.32 Aligned_cols=45 Identities=18% Similarity=0.194 Sum_probs=41.1
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2en8_A 1 GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRV--HMGEKCSGPSSG 46 (46)
T ss_dssp CCCCCCCCCCSSEECTTTCCEESSHHHHHHHHTT--TCCSCSSCCSCC
T ss_pred CCccccCCCCCCeECCCcCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3457899999999999999999999999999999 999988 88876
No 99
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.77 E-value=7.2e-09 Score=66.49 Aligned_cols=44 Identities=27% Similarity=0.420 Sum_probs=40.4
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..+.|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2emf_A 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGG--TSCSSCSCCCCC
T ss_pred ccccccCCCCCeECCCCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 456789999999999999999999999999999 999888 88876
No 100
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.77 E-value=7.5e-09 Score=66.38 Aligned_cols=44 Identities=27% Similarity=0.425 Sum_probs=40.5
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
...++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2eq0_A 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTT--TCCCCCSCCSCC
T ss_pred CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 446789999999999999999999999999999 999888 98876
No 101
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=98.76 E-value=8.3e-09 Score=66.20 Aligned_cols=44 Identities=23% Similarity=0.378 Sum_probs=40.8
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|.....|..|+++ |+++++ .|..|
T Consensus 2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2el6_A 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM--HTREKPSGPSSG 46 (46)
T ss_dssp CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGG--GCCSSCCSCCCC
T ss_pred CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 457899999999999999999999999999999 999888 98876
No 102
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=5.3e-09 Score=67.11 Aligned_cols=45 Identities=24% Similarity=0.395 Sum_probs=41.0
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2emh_A 1 GSSGSSGTGERPYICTVCGKAFTDRSNLIKHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSCSCCCSEECTTTCCEESSHHHHHHHHHH--HHCSSCSSSCCC
T ss_pred CCCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 3567899999999999999999999999999999 888888 88876
No 103
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=98.76 E-value=4.7e-09 Score=71.44 Aligned_cols=49 Identities=27% Similarity=0.631 Sum_probs=39.3
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (353)
+||.|+.|++.|.....|..|+++ |.++++ .|..|++.|.....|..|+
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~ 50 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRS--HTNEKPYPCGLCNRAFTRRDLLIRHA 50 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHT--TTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred CcCcCCCCccccCCHHHHHHHHHH--hCCCCCccCCCCCCccCCHHHHHHHH
Confidence 589999999999999999999999 887776 6666666666666666664
No 104
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=4.9e-09 Score=67.26 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=41.1
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
|+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emp_A 1 GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCSCSSCCCSEECSSSCCEESCHHHHHHHHHH--HHCCSCCSCCCC
T ss_pred CCcccccCCCcCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3557899999999999999999999999999999 998888 98876
No 105
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=98.76 E-value=2.3e-09 Score=79.27 Aligned_cols=75 Identities=20% Similarity=0.370 Sum_probs=61.9
Q ss_pred CCC-ccc--cCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCCcccCCcc
Q 018586 42 HQP-KCA--VCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSN 115 (353)
Q Consensus 42 ~~~-~C~--~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~ 115 (353)
+++ .|. .|++.|.....|..|+ .++.+. .|+.|++.|...+.|..|+++|++++||.|+.|+..
T Consensus 2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~ 71 (90)
T 1a1h_A 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPF----------QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71 (90)
T ss_dssp -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCE----------ECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCc----------cCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCch
Confidence 456 887 6999999999999998 333333 588899999999999999999999999999999888
Q ss_pred hhhhhhhcccc
Q 018586 116 AESQKKISGAI 126 (353)
Q Consensus 116 ~~~~~~~~~~~ 126 (353)
+.....+..+.
T Consensus 72 f~~~~~l~~H~ 82 (90)
T 1a1h_A 72 FARSDERKRHT 82 (90)
T ss_dssp ESSHHHHHHHH
T ss_pred hCCHHHHHHHH
Confidence 77766665544
No 106
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=7.2e-09 Score=66.46 Aligned_cols=44 Identities=30% Similarity=0.442 Sum_probs=40.7
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytd_A 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI--HTGYRPSGPSSG 46 (46)
T ss_dssp CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHH--HTCCCSSCSSCC
T ss_pred CCccccCCCcCeECCCCCCeeCChHHHHHHHHH--cCCCCCCCCCCC
Confidence 457899999999999999999999999999999 999888 98876
No 107
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=7.8e-09 Score=66.28 Aligned_cols=45 Identities=22% Similarity=0.400 Sum_probs=40.8
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~~ 46 (46)
T 2ep3_A 1 GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCSSSSCCCSEECSSSCCEESSHHHHHHHHTT--TTTSCCCCTTCC
T ss_pred CCCCCCCCCCCCeECCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 4567899999999999999999999999999999 999888 88764
No 108
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=4.6e-09 Score=67.49 Aligned_cols=45 Identities=18% Similarity=0.336 Sum_probs=41.1
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 1 g~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2ytm_A 1 GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL--HTGQRPSGPSSG 46 (46)
T ss_dssp CCSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHH--HHSCCCCCCCCC
T ss_pred CCCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 3567899999999999999999999999999999 888888 98876
No 109
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=8.6e-09 Score=66.05 Aligned_cols=44 Identities=23% Similarity=0.378 Sum_probs=40.6
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eq4_A 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERL--HSGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHH--CCSSSCCCCCCC
T ss_pred CCcccCCCCCCeECCCCCCccCchHHHHHHHHh--cCCCCCCCCCCC
Confidence 457889999999999999999999999999999 999988 98876
No 110
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.76 E-value=5.5e-09 Score=67.06 Aligned_cols=44 Identities=23% Similarity=0.297 Sum_probs=40.8
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+.+++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em8_A 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV--HTGEKLSGPSSG 46 (46)
T ss_dssp CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHH--HHCCCCCCSCCC
T ss_pred CCCCCCCCCCCeECcccCchhCCHHHHHHHHHH--HcCCCCCCCCCC
Confidence 567899999999999999999999999999999 998888 88876
No 111
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.75 E-value=9.8e-09 Score=65.77 Aligned_cols=44 Identities=23% Similarity=0.288 Sum_probs=40.4
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
...++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2epw_A 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT--HVDDKHSGPSSG 46 (46)
T ss_dssp CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHH--CCSCCCSCCCCC
T ss_pred cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 446789999999999999999999999999999 999888 98876
No 112
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.75 E-value=7.6e-09 Score=66.34 Aligned_cols=44 Identities=20% Similarity=0.345 Sum_probs=40.6
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2epz_A 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTT--TTTCCCCSSCCC
T ss_pred CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 457899999999999999999999999999999 999888 99876
No 113
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.75 E-value=7.5e-09 Score=66.34 Aligned_cols=44 Identities=30% Similarity=0.508 Sum_probs=40.5
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2emm_A 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHH--HSCCCTTSSSCC
T ss_pred CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 456889999999999999999999999999999 999888 99877
No 114
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.75 E-value=2e-09 Score=81.49 Aligned_cols=56 Identities=23% Similarity=0.348 Sum_probs=52.5
Q ss_pred CCCCCCCCceeecccccccc-ChHHHHHHHhhhcCCC-CCC-ccccCcccCCChHHHHhcc
Q 018586 6 ELPKRSTARHKCVACYKQFK-RKDHLIEHMKISYHSV-HQP-KCAVCQKLSKSFESLREHL 63 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~-~~~~l~~H~~~~~h~~-~~~-~C~~C~~~f~~~~~l~~H~ 63 (353)
.+.|+++++|.|+.|++.|. ....|..|+++ |.+ +++ .|..|++.|..+..|..|+
T Consensus 16 ~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~--h~~~~~~~~C~~C~k~F~~~~~L~~H~ 74 (98)
T 2gqj_A 16 QRAIHERGEAVCPTCNVVTRKTLVGLKKHMEV--CQKLQDALKCQHCRKQFKSKAGLNYHT 74 (98)
T ss_dssp HHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHH--HHHHHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred HHHhccCCCcCCCCCCCChhhhHHHHHHHHHH--HcCCCCCEECCCCCCccCCHHHHHHHH
Confidence 45789999999999999999 99999999999 777 777 9999999999999999998
No 115
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=9e-09 Score=66.00 Aligned_cols=44 Identities=20% Similarity=0.336 Sum_probs=40.5
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eoq_A 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV--HTAEKPSGPSSG 46 (46)
T ss_dssp CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHH--TTCCCSSSCCCC
T ss_pred CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 456789999999999999999999999999999 999988 98876
No 116
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=8.6e-09 Score=66.09 Aligned_cols=44 Identities=25% Similarity=0.422 Sum_probs=40.5
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~c 46 (46)
T 2ytk_A 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHH--HSSSSCSSCCCC
T ss_pred CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHH--HCCCCCCCCCCC
Confidence 457889999999999999999999999999999 998888 98876
No 117
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=98.74 E-value=8.9e-09 Score=66.01 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=40.5
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em0_A 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNV--HVGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGG--GSSSSCSCSSCC
T ss_pred CCcCccCCCcCeECCCCCcccCCHHHHHHHHHH--cCCCCCcCCCCC
Confidence 456889999999999999999999999999999 999888 98876
No 118
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.74 E-value=5.9e-09 Score=66.88 Aligned_cols=44 Identities=23% Similarity=0.391 Sum_probs=40.5
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
...++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2yu8_A 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRV--HTGGKPSGPSSG 46 (46)
T ss_dssp CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHH--HHSCCCSCSCCC
T ss_pred CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 457889999999999999999999999999999 888888 88876
No 119
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=98.74 E-value=1.5e-09 Score=83.40 Aligned_cols=78 Identities=15% Similarity=0.142 Sum_probs=65.8
Q ss_pred HhhhcCCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCCc
Q 018586 34 MKISYHSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 34 ~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
+++ |+++++ .|..|++.|.....|..|+ .+++ .|+.|++.|.....|..|++ |++++||.|
T Consensus 8 ~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~------------~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C 72 (107)
T 1wjp_A 8 ASP--VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA------------VCPYCSLRFFSPELKQEHES-KCEYKKLTC 72 (107)
T ss_dssp CCC--CCCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSB------------CCTTTCCCBSSHHHHHHHHH-HCSTGGGEE
T ss_pred Ccc--cCCCcCeECCCCCCccCCHHHHHHHHHHCCCCc------------cCCCCCCccCCHHHHHHHHH-cCCCCCccC
Confidence 455 888888 9999999999999999998 2233 57889999999999999996 999999999
Q ss_pred ccCCcchhhhhhhcccc
Q 018586 110 EKTLSNAESQKKISGAI 126 (353)
Q Consensus 110 ~~~~~~~~~~~~~~~~~ 126 (353)
+.|...+.....+..+.
T Consensus 73 ~~C~~~f~~~~~L~~H~ 89 (107)
T 1wjp_A 73 LECMRTFKSSFSIWRHQ 89 (107)
T ss_dssp GGGTEECSSHHHHHHHH
T ss_pred ccccchhCCHHHHHHHH
Confidence 99988777766666544
No 120
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=6.2e-09 Score=66.78 Aligned_cols=44 Identities=20% Similarity=0.421 Sum_probs=40.7
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytg_A 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGG--GSSCCSSCSCCC
T ss_pred CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 557889999999999999999999999999999 999888 98877
No 121
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=7.6e-09 Score=66.39 Aligned_cols=44 Identities=27% Similarity=0.380 Sum_probs=40.4
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..+.|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eoo_A 2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKR--HFREKSSGPSSG 46 (46)
T ss_dssp CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHH--HHSTTSSCCSCC
T ss_pred CCCCCCCCCCCEEccccCcccCCHHHHHHHHHH--HcCCCCCCCCCC
Confidence 456889999999999999999999999999999 888888 88876
No 122
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.73 E-value=1.3e-08 Score=65.30 Aligned_cols=44 Identities=23% Similarity=0.371 Sum_probs=40.3
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
...++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~c 46 (46)
T 2ep2_A 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI--HTGEKPSGPSSG 46 (46)
T ss_dssp CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHT--TSSCCSCCSCCC
T ss_pred CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 346789999999999999999999999999999 999988 98876
No 123
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.73 E-value=9.2e-09 Score=65.28 Aligned_cols=42 Identities=21% Similarity=0.357 Sum_probs=39.1
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
.++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 44 (44)
T 2emx_A 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQT--HAEEKPSGPSSG 44 (44)
T ss_dssp CCCCSSCCCEECSSSSCEESSHHHHHHHHHH--HTSSCSCSCCCC
T ss_pred CCCcCCCcCccCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 5789999999999999999999999999999 999888 88876
No 124
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=1.2e-08 Score=65.34 Aligned_cols=44 Identities=25% Similarity=0.419 Sum_probs=40.4
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2eop_A 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRI--HTGENPSGPSSG 46 (46)
T ss_dssp CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTT--TTTSCCSCCCCC
T ss_pred CCccccCCCCCeeCCCCCchhCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 346789999999999999999999999999999 999888 88876
No 125
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=1.3e-08 Score=65.26 Aligned_cols=44 Identities=20% Similarity=0.402 Sum_probs=40.3
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
...++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2en1_A 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV--HTGEKPSGPSSG 46 (46)
T ss_dssp CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGG--GSCCCCSCCCCC
T ss_pred CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 346789999999999999999999999999999 999888 88876
No 126
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=1.2e-08 Score=65.41 Aligned_cols=44 Identities=30% Similarity=0.490 Sum_probs=40.4
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2em5_A 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTT--TSCSCCSSCCCC
T ss_pred CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 346789999999999999999999999999999 999888 98877
No 127
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.72 E-value=1.2e-08 Score=65.36 Aligned_cols=44 Identities=23% Similarity=0.356 Sum_probs=40.5
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+..++|++++||.|+.|++.|.....|..|+++ |+++++ .|..|
T Consensus 2 s~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ep0_A 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCSSTTCCSEECSSSCCEESSHHHHHHHHTT--TSSSCCCSCCCC
T ss_pred CCCCCCCCCCCeeCcccCcccCChHHHHHHHHH--hCCCCCCCCCCC
Confidence 347889999999999999999999999999999 999888 98876
No 128
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=1.2e-08 Score=65.58 Aligned_cols=44 Identities=20% Similarity=0.386 Sum_probs=40.3
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHh-hhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~h~~~~~-~C~~C 49 (353)
+..+.|++++||.|+.|++.|...+.|..|++ + |+++++ .|..|
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~--H~~~k~~~C~~C 47 (47)
T 2epx_A 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYY--HTGEKPSGPSSG 47 (47)
T ss_dssp CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTT--TTTSCSSSCCCC
T ss_pred ccccccCCCCCEECCccCchhCChHHHHHHhHhh--cCCCCCCCCCCC
Confidence 34688999999999999999999999999999 9 999888 98876
No 129
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.71 E-value=5e-09 Score=67.26 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=40.9
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
+.+++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 2 ~~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 46 (46)
T 2ytt_A 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWIT--HTREKPSGPSSG 46 (46)
T ss_dssp CCSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTH--HHHCCCCSCCCC
T ss_pred CCCCCCCCCCCeeCCCCCcccCCHHHHHHHHHH--cCCCCCCCCCCC
Confidence 568899999999999999999999999999999 888888 88876
No 130
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.71 E-value=4.5e-09 Score=74.54 Aligned_cols=47 Identities=17% Similarity=0.259 Sum_probs=40.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccCCcchhhhhhhcccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|+.|++.|...+.|..|+++|++++||.|+.|...+.....+..+.
T Consensus 16 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~ 62 (72)
T 1x6e_A 16 GCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62 (72)
T ss_dssp ECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHH
T ss_pred cCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHH
Confidence 58889999999999999999999999999999998877666665543
No 131
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.71 E-value=1.1e-08 Score=65.22 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=39.7
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQ 50 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~ 50 (353)
...|++++||.|+.|++.|...+.|..|+++ |+++++ .|..||
T Consensus 2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~~~C~~cg 45 (45)
T 2epq_A 2 SSGSSGEKPYSCPVCGLRFKRKDRMSYHVRS--HDGSVGKSGPSSG 45 (45)
T ss_dssp CCCCSSCCSSEETTTTEECSCHHHHHHHHHH--HSCCCCCCCCCCC
T ss_pred CCCcCCCCCCcCCCCCcccCCHHHHHHHHHH--ccCCCCCCCcCCC
Confidence 3579999999999999999999999999999 999888 999886
No 132
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=98.70 E-value=9.9e-09 Score=68.92 Aligned_cols=56 Identities=25% Similarity=0.486 Sum_probs=41.4
Q ss_pred ceeeccccccccChHHHHHHHhhhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCccccccccccccccccCchh
Q 018586 14 RHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDSPSS 93 (353)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~ 93 (353)
||.|+.|++.|.....|..|+++ |.++++ + .|+.|+++|...+.
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~--h~~~~~----------------------~------------~C~~C~~~f~~~~~ 44 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRT--HTDVRP----------------------Y------------HCTYCNFSFKTKGN 44 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH--TSSCCC----------------------E------------ECSSSSCEESSHHH
T ss_pred CCcCCCCcCcCCCHHHHHHHHHh--cCCCCC----------------------c------------cCCCCCchhcCHHH
Confidence 68999999999999999999998 777654 1 24556666666666
Q ss_pred HHHHHHHhcCCC
Q 018586 94 LIKHKEACSLSA 105 (353)
Q Consensus 94 L~~H~~~h~~~k 105 (353)
|..|+++|++++
T Consensus 45 l~~H~~~h~~~k 56 (57)
T 1bbo_A 45 LTKHMKSKAHSK 56 (57)
T ss_dssp HHHHHHSSSSCC
T ss_pred HHHHHHHhcccC
Confidence 666666666554
No 133
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.70 E-value=1.4e-08 Score=65.04 Aligned_cols=45 Identities=24% Similarity=0.442 Sum_probs=40.6
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
++..+.|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~~ 46 (46)
T 2em2_A 1 GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCCCSCCCCCSEECSSSCCEESSHHHHHHHHHH--HCCCCSSCSSCC
T ss_pred CCCCCCCCCCCCEECCcCCchhCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 3567899999999999999999999999999999 998888 88764
No 134
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.70 E-value=4.6e-09 Score=79.23 Aligned_cols=53 Identities=21% Similarity=0.357 Sum_probs=49.2
Q ss_pred CCCCCCceeeccccccc-cChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhc-c
Q 018586 8 PKRSTARHKCVACYKQF-KRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREH-L 63 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f-~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H-~ 63 (353)
.|.+++||.|+.|++.| .....|..|+++ | ++++ .|..|++.|..++.|..| +
T Consensus 28 ~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~--h-~~k~~~C~~Cgk~F~~~~~L~~H~~ 83 (96)
T 2ctd_A 28 EIVDKGSVSCPTCQAVGRKTIEGLKKHMEN--C-KQEMFTCHHCGKQLRSLAGMKYHVM 83 (96)
T ss_dssp HHHHTSCEECTTTCSCEESSHHHHHHHHHH--H-CCCCCCCSSSCCCCSSHHHHHHHHH
T ss_pred HhcCCCCcCCCCCCCCcccCHHHHHHHHHH--H-CCCCeECCCCCCeeCCHHHHHHHhH
Confidence 35568899999999999 999999999999 8 8888 999999999999999999 5
No 135
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.70 E-value=1.6e-08 Score=64.72 Aligned_cols=43 Identities=21% Similarity=0.312 Sum_probs=39.9
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..|
T Consensus 3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~C 46 (46)
T 2eme_A 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI--HTGEKPSGPSSG 46 (46)
T ss_dssp CCCTTCCCCSEECSSSCCEESSHHHHHHHHGG--GCCCSCCSSCCC
T ss_pred CCCCCCCCCCeECCCCChhhCCHHHHHHHHHh--cCCCCCCCCCCC
Confidence 46789999999999999999999999999999 999888 98877
No 136
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=98.68 E-value=3.1e-09 Score=76.40 Aligned_cols=47 Identities=11% Similarity=0.181 Sum_probs=39.3
Q ss_pred ccccccccccCchhHHHHHH-HhcCC-CCCCcccCCcchhhhhhhcccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKE-ACSLS-APVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~-~h~~~-k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|+.|++.|...+.|..|++ .|.++ ++|+|+.|...+.....+..+.
T Consensus 17 ~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~ 65 (77)
T 2ct1_A 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65 (77)
T ss_dssp ECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHH
T ss_pred ECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHH
Confidence 58889999999999999997 67764 8999999998877776666554
No 137
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.68 E-value=2.3e-08 Score=64.79 Aligned_cols=44 Identities=25% Similarity=0.338 Sum_probs=40.3
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQK 51 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~ 51 (353)
...|++++||.|+.|++.|.....|.+|+++ |+++++ .|..|++
T Consensus 4 ~~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C~k 48 (48)
T 2epr_A 4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLS--HSGEKPYSSGPSSG 48 (48)
T ss_dssp CSCCCCCCSEEETTTTEEESSHHHHHHHGGG--SCSCCCCCSCCCCC
T ss_pred CCCCCCCcCeeCCCCCcccCCHHHHHHHHHh--cCCCCCccCCCCCC
Confidence 4568899999999999999999999999999 999988 9999975
No 138
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.68 E-value=1.9e-08 Score=63.76 Aligned_cols=43 Identities=28% Similarity=0.438 Sum_probs=39.2
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
|+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|+
T Consensus 1 n~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2eoj_A 1 GSSGSSGTGENPYECCECGKVFSRKDQLVSHQKT--HSGQSGPSSG 44 (44)
T ss_dssp CCSCCSSSSCCSCEETTTTEECSSHHHHHHHHTT--SSSSCSCCCC
T ss_pred CCCccccCCCcCeeCCCCCCccCCHHHHHHHHHH--cCCCCCCCCC
Confidence 5678899999999999999999999999999999 998887 763
No 139
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=2.7e-08 Score=63.74 Aligned_cols=43 Identities=26% Similarity=0.418 Sum_probs=39.2
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2em4_A 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRS--HTGEKPSGPSS 45 (46)
T ss_dssp CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHH--HSSSSCCCCCC
T ss_pred CCccccCCCcCcCCCCCCCccCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 567899999999999999999999999999999 999888 8753
No 140
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.64 E-value=3e-08 Score=63.49 Aligned_cols=43 Identities=28% Similarity=0.465 Sum_probs=39.2
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ytp_A 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTT--TSCCCCCSSCC
T ss_pred CcccCcCCCCCeECCcCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 567899999999999999999999999999999 999888 8753
No 141
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.63 E-value=3.3e-08 Score=63.29 Aligned_cols=44 Identities=23% Similarity=0.352 Sum_probs=39.5
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
++..+.|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..
T Consensus 1 ~~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2emi_A 1 GSSGSSGTGERHYECSECGKAFIQKSTLSMHQRI--HRGEKPSGPSS 45 (46)
T ss_dssp CCCCCSCSSCCCEECSSSCCEESSHHHHHHHHGG--GCSCCCCSCCC
T ss_pred CCCCcccCCCCCCCCCCCCcccCCHHHHHHHHhH--hCCCCCCCCCC
Confidence 3567899999999999999999999999999999 998888 7753
No 142
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=3.5e-08 Score=63.22 Aligned_cols=42 Identities=21% Similarity=0.413 Sum_probs=38.6
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
+..++|++++||.|+.|++.|.....|.+|+++ |+++++ .|.
T Consensus 2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2enh_A 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRV--HSGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGG--SCCSCCCCCC
T ss_pred CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 557889999999999999999999999999999 999888 775
No 143
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.62 E-value=2.9e-08 Score=63.55 Aligned_cols=44 Identities=23% Similarity=0.385 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 1 ~~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2en9_A 1 GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHH--HTSSCCCSCCC
T ss_pred CCCCCCCCCCCCEECCccCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3567899999999999999999999999999999 998888 8753
No 144
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=4.7e-08 Score=62.49 Aligned_cols=43 Identities=26% Similarity=0.394 Sum_probs=39.0
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
...++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~p~~C~~ 45 (46)
T 2yts_A 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGG--TSSCCSSCCCC
T ss_pred CCCCCCCCCcCEECCCCChhhCChHHHHHHHHh--cCCCCCcCCCC
Confidence 456889999999999999999999999999999 999888 8764
No 145
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=5.1e-08 Score=62.32 Aligned_cols=43 Identities=23% Similarity=0.437 Sum_probs=39.0
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
...++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ytf_A 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRT--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHT--SCSSSSSCCCC
T ss_pred CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 457889999999999999999999999999999 999888 8763
No 146
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.60 E-value=3.9e-08 Score=62.93 Aligned_cols=44 Identities=23% Similarity=0.363 Sum_probs=39.5
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
++..++|++++||.|+.|++.|.....|..|+++ |+++++ .|..
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq1_A 1 GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTT--TCCSCCSSCCC
T ss_pred CCcccccCCCCCeECCcCChhhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 3557899999999999999999999999999999 999888 8753
No 147
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=4.4e-08 Score=62.67 Aligned_cols=43 Identities=28% Similarity=0.414 Sum_probs=39.1
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
+..++|++++||.|+.|++.|.....|..|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~ 45 (46)
T 2emg_A 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKI--HTGERPSGPSS 45 (46)
T ss_dssp CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTT--TSCCCCSCSCC
T ss_pred CCCCCCCCCCCEECCccCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 457899999999999999999999999999999 999888 8753
No 148
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=4e-08 Score=62.92 Aligned_cols=44 Identities=23% Similarity=0.274 Sum_probs=39.4
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yto_A 1 GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS--HTGERHSGPSS 45 (46)
T ss_dssp CCCCCCCCSCCCEECSSSCCEESSHHHHHHHHHH--HTCCCBTTTBC
T ss_pred CCcccccCCCCCEECcccCCccCCHhHHHHHHHH--cCCCCCCCCCC
Confidence 3567889999999999999999999999999999 998888 8753
No 149
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=4.6e-08 Score=62.59 Aligned_cols=43 Identities=26% Similarity=0.437 Sum_probs=38.9
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
...+.|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2enf_A 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTT--TTTSSCCCCSC
T ss_pred CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHh--hCCCCCCCCCC
Confidence 457889999999999999999999999999999 999888 8764
No 150
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=98.59 E-value=4.5e-08 Score=62.66 Aligned_cols=43 Identities=21% Similarity=0.397 Sum_probs=38.9
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
+..+.|++++||.|+.|++.|.....|.+|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2emj_A 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHH--HTTSCSSSSCC
T ss_pred CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 457889999999999999999999999999999 998888 8763
No 151
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.59 E-value=3.6e-08 Score=63.08 Aligned_cols=44 Identities=18% Similarity=0.360 Sum_probs=39.4
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq2_A 1 GSSGSSGTGGKPYQCNECGKAFSQTSKLARHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGG--GCCCCCCCCCC
T ss_pred CCcccccCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 3457899999999999999999999999999999 998888 8753
No 152
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=4.3e-08 Score=68.12 Aligned_cols=60 Identities=20% Similarity=0.278 Sum_probs=44.7
Q ss_pred CCCCCceeeccccccccChHHHHHHHhhhcCCCCCCccccCcccCCChHHHHhccCCCCCCCCCCccccccccc-ccccc
Q 018586 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCN-LCMNI 87 (353)
Q Consensus 9 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~-~C~k~ 87 (353)
..+++||.|+.|++.|. .+.|..|+++ +++++ + .|+ .|+++
T Consensus 5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~---~~~~p----------------------~------------~C~~~C~k~ 46 (66)
T 2eod_A 5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ---CPRLP----------------------V------------ACPNQCGVG 46 (66)
T ss_dssp CCCCCEEECSSSCCEEE-HHHHHHHHHH---CSSSE----------------------E------------ECTTCCSCC
T ss_pred cCCCCCeeccccCCccC-HHHHHHHHHH---cCCcC----------------------c------------cCCcccCcc
Confidence 46789999999999999 9999999875 23222 1 366 67777
Q ss_pred ccCchhHHHHHHHhcCCCC
Q 018586 88 FDSPSSLIKHKEACSLSAP 106 (353)
Q Consensus 88 F~~~s~L~~H~~~h~~~k~ 106 (353)
|...+.|..|+++|...+|
T Consensus 47 f~~~~~L~~H~~~hc~~~~ 65 (66)
T 2eod_A 47 TVAREDLPGHLKDSCNTAL 65 (66)
T ss_dssp EEETTTHHHHHHTTSSSCC
T ss_pred cccHHHHHHHHHhhcccCc
Confidence 7777888888887765544
No 153
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.58 E-value=5.6e-08 Score=62.13 Aligned_cols=43 Identities=23% Similarity=0.422 Sum_probs=38.9
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yrj_A 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTT--TSSCCSSCSCC
T ss_pred CCccCCCCCCCeECCCCCCccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 457899999999999999999999999999999 998888 8753
No 154
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.58 E-value=4.2e-08 Score=62.87 Aligned_cols=43 Identities=26% Similarity=0.461 Sum_probs=39.0
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
+.+++|++++||.|+.|++.|.....|.+|+++ |+++++ .|..
T Consensus 2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eon_A 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV--HSGERPSGPSS 45 (46)
T ss_dssp CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTT--TTSCCSCTTSC
T ss_pred CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHh--cCCCCCCCCCC
Confidence 457899999999999999999999999999999 999888 8753
No 155
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.57 E-value=6.4e-08 Score=61.33 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=37.8
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|
T Consensus 1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~~ 43 (44)
T 2epv_A 1 GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERT--HAGVSGPSS 43 (44)
T ss_dssp CCCCCCCCCCCSEECSSSCCEESSHHHHHHHHGG--GSSCSCCCC
T ss_pred CCCCcccCCCcCeECCCCCcccCchHHHHHHHhH--hcCCCCCCC
Confidence 3567899999999999999999999999999999 988877 54
No 156
>1x9m_A DNA polymerase; DNA ploymerase, N-2-acetylaminofluorene, replication block, mutagenesis, transferase/electron transport/DNA complex; HET: DNA 2DT 8FG; 2.10A {Enterobacteria phage T7} SCOP: c.55.3.5 e.8.1.1 PDB: 1skr_A* 1skw_A* 1sl0_A* 1sks_A* 1sl2_A* 1t7p_A* 1t8e_A* 1tk0_A* 1tk5_A* 1tk8_A* 1tkd_A* 1sl1_A* 1x9s_A* 1x9w_A* 1zyq_A* 2ajq_A*
Probab=98.57 E-value=2e-08 Score=101.93 Aligned_cols=135 Identities=19% Similarity=0.229 Sum_probs=93.2
Q ss_pred eeeccCccccccCCCCccceeEEeeecCCCCeEEeeeccCCCCccccccccCCCCHhhhcCCCChHHHHHHHHHHHhcCC
Q 018586 137 AVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEILNNGE 216 (353)
Q Consensus 137 ~~~~D~Ettg~~~~~~~~il~~v~ivd~~g~~~~~~lv~P~~~i~~~~~~~~GIt~e~l~~~~~~~~v~~~~~~~~~~~~ 216 (353)
++++|+||||+++... .+ ..+.+.+..+...+ .+.| . .+.++++.|.+|+.
T Consensus 1 ~vv~D~ETtGl~~~~d-~i-~~iqi~~~~~~~~~--~~~p----------------~------~i~~~l~~L~~~l~--- 51 (698)
T 1x9m_A 1 MIVSDIEANALLESVT-KF-HCGVIYDYSTAEYV--SYRP----------------S------DFGAYLDALEAEVA--- 51 (698)
T ss_dssp CEEEEEEESSCGGGCC-CE-EEEEEEETTTTEEE--EECG----------------G------GHHHHHHHHHHHHH---
T ss_pred CEEEEcCCCCcCCCCC-EE-EEEEEEecCCCcEE--EECh----------------H------HHHHHHHHHHHHHh---
Confidence 5799999999864322 23 45666554332221 1111 1 23456788888882
Q ss_pred CCcccccCCCCCcEEEeccc-HHHHHHhc----------CcCCCCceeecccccCCcccCCCCCcHHHHHHHHh------
Q 018586 217 STGRLMLDDGKARLLVGHGL-EHDLDSLR----------MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYL------ 279 (353)
Q Consensus 217 ~~~~~~~~~~~~~~lvgh~~-~~D~~~l~----------~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~------ 279 (353)
.+.++|+||+ .||+.+|. +..+...++||+..+..+.|...+++|+.|++.||
T Consensus 52 ----------~~~~kV~HNa~kfD~~~L~~~~~~~~~~Gi~l~~~~~~DTmlaayLL~p~~~~~~L~~La~~~L~~sL~~ 121 (698)
T 1x9m_A 52 ----------RGGLIVFHNGHKYDVPALTKLAKLQLNREFHLPRENCIDTLVLSRLIHSNLKDTDMGLLRSGKLPGALEA 121 (698)
T ss_dssp ----------TTCCEEESSTTTTHHHHHHHHHHHHHCCCCCCCGGGEEEHHHHHHHHTTTSCCCTTTTSCGGGSCSCCCH
T ss_pred ----------cCCeEEEcCChHHHHHHHHHhhhhcccCCccCCCCcchhHHHHHHHhCCCCCCCCHHHHHHHHcccchhh
Confidence 3568999999 99999995 22331468999999999988777888888888876
Q ss_pred -CCcC-----C-----------CC----------------CCChHHHHHHHHHHHHHHHhchhh
Q 018586 280 -GYDI-----Q-----------SG----------------VHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 280 -~~~~-----~-----------~~----------------~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
|..+ . .+ .|.|..||.+|++||..+..++.+
T Consensus 122 ~g~~lg~~Ki~~~~~~g~~~~~kg~~~~~~~~~~~~~~~~~~YA~~Da~~t~~L~~~L~~~L~~ 185 (698)
T 1x9m_A 122 WGYRLGEMKGEYKDDFKRMLEEQGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHY 185 (698)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCTTGGGTSCCHHHHHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred hcccccccccCHHHHhCcccccccccccccCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3211 0 00 356889999999999999987654
No 157
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.57 E-value=6.3e-08 Score=61.62 Aligned_cols=42 Identities=21% Similarity=0.467 Sum_probs=38.2
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
+..++|++++||.|+.|++.|.....|..|+++ |+++++ .|.
T Consensus 2 s~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~ 44 (45)
T 2epu_A 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI--HTGEKSGPSS 44 (45)
T ss_dssp CCCCCCCSCCSEEETTTTEEESSHHHHHHHHTT--TSSCCCCCSC
T ss_pred CCCCCCCCCcCccCCCCCCccCChHHHHHHHHH--hCCCCCCCCC
Confidence 456789999999999999999999999999999 999888 775
No 158
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=5.5e-08 Score=62.17 Aligned_cols=43 Identities=23% Similarity=0.344 Sum_probs=38.7
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
...++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eow_A 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT--HSGEKPSGPSS 45 (46)
T ss_dssp CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHH--HCCCSCSCTTC
T ss_pred CccCCCCCCCCeeccccCChhcCHHHHHHHHHH--cCCCCCCCCCC
Confidence 446789999999999999999999999999999 998888 8753
No 159
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=5e-08 Score=62.42 Aligned_cols=43 Identities=26% Similarity=0.407 Sum_probs=38.8
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
...++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yti_A 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGI--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTT--TSCSCCSSTTC
T ss_pred CCCcCCCCCcCeECCCCCcccCChhHHHHHhHh--cCCCCCCCCCC
Confidence 456889999999999999999999999999999 999888 8753
No 160
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=6.3e-08 Score=61.97 Aligned_cols=42 Identities=19% Similarity=0.362 Sum_probs=38.3
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|.
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2eoh_A 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRV--HTGERSSGPS 44 (46)
T ss_dssp CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHH--CSSCCSCSTT
T ss_pred CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 356889999999999999999999999999999 999888 775
No 161
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.56 E-value=4.9e-08 Score=62.53 Aligned_cols=42 Identities=24% Similarity=0.485 Sum_probs=38.6
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
+..+.|++++||.|+.|++.|.....|..|+++ |+++++ .|.
T Consensus 2 ~~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2eom_A 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRI--HTGEKPSGPS 44 (46)
T ss_dssp CCCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHH--HSSCCCSSCC
T ss_pred CCCCCCCCCCCcCCCCCCCeeCChHHHHHHHHH--hCCCCCCCCC
Confidence 457889999999999999999999999999999 998888 875
No 162
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=98.56 E-value=1.9e-08 Score=69.77 Aligned_cols=55 Identities=16% Similarity=0.411 Sum_probs=47.0
Q ss_pred CCCCCC-ccccCcccCCChHHHHhcc-C----CCCCCCCCCccccccccccccccccCchhHHHHHHHhcC
Q 018586 39 HSVHQP-KCAVCQKLSKSFESLREHL-T----GPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSL 103 (353)
Q Consensus 39 h~~~~~-~C~~C~~~f~~~~~l~~H~-~----~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~ 103 (353)
|+++++ .|..|++.|.....|..|+ . ++.++ .|+.|+++|...+.|..|+++|++
T Consensus 5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~----------~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVY----------PCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCE----------ECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCe----------ECCCCCCccCCHHHHHHHHHHHcC
Confidence 788888 9999999999999999997 1 23333 689999999999999999999875
No 163
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=6.1e-08 Score=62.02 Aligned_cols=42 Identities=19% Similarity=0.332 Sum_probs=38.4
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|.
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (46)
T 2eoz_A 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV--HTQETLSGPS 44 (46)
T ss_dssp CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHH--HSSCCSSSCC
T ss_pred CccccCCCCCCeECcccChhhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 457889999999999999999999999999999 888888 775
No 164
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=6.1e-08 Score=60.57 Aligned_cols=39 Identities=21% Similarity=0.477 Sum_probs=36.1
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
.++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|
T Consensus 2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 41 (42)
T 2yte_A 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKM--HTVKSGPSS 41 (42)
T ss_dssp CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHH--TSCCSSCCC
T ss_pred CcCcCCCCCeECCCCCCccCCHHHHHHHHHH--hCCCCCCCC
Confidence 4689999999999999999999999999999 998887 66
No 165
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=5.3e-08 Score=61.53 Aligned_cols=42 Identities=21% Similarity=0.316 Sum_probs=38.0
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
...++|++++||.|+.|++.|...+.|..|+++ |+++++ .|.
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2en7_A 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT--HTGESGPSSG 44 (44)
T ss_dssp CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTT--TCCSSSSCCC
T ss_pred CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhh--cCCCCCCCCC
Confidence 456889999999999999999999999999999 998887 763
No 166
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.56 E-value=4.3e-08 Score=62.69 Aligned_cols=44 Identities=23% Similarity=0.371 Sum_probs=39.3
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~kp~~C~~ 45 (46)
T 2eor_A 1 GSSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI--HTGEKPSGPSS 45 (46)
T ss_dssp CCSSSSSSCCCSEECTTTCCEESSHHHHHHHHHH--HHSCCCSSSTT
T ss_pred CCCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 3457899999999999999999999999999999 888888 8753
No 167
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=4.8e-08 Score=61.64 Aligned_cols=40 Identities=13% Similarity=0.200 Sum_probs=37.0
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
.++|++++||.|+.|++.|...+.|..|+++ |+++++ .|.
T Consensus 2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 42 (43)
T 2yrm_A 2 SSGSSGNGAFFCNECDCRFSEEASLKRHTLQ--THSDKSGPSS 42 (43)
T ss_dssp CSCCSSSCCBCCSSSCCCBSSHHHHHHHHHH--HTCTTCSSSC
T ss_pred CcCcCCCCCEECCCCCCeeCChHHHHHHHHh--hCCCCCccCC
Confidence 4689999999999999999999999999999 998888 875
No 168
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=98.55 E-value=6.1e-08 Score=60.63 Aligned_cols=40 Identities=28% Similarity=0.467 Sum_probs=36.5
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
.++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|.
T Consensus 2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 42 (42)
T 2el5_A 2 SSGSSGENPYECSECGKAFNRKDQLISHQRT--HAGESGPSSG 42 (42)
T ss_dssp CSSSSSCCSEECSSSCCEESSHHHHHHHHGG--GCCCCSCCCC
T ss_pred CCCCCCCCCccCCCcChhhCCHHHHHHHHHh--cCCCCCCCCC
Confidence 4689999999999999999999999999999 998887 763
No 169
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=98.55 E-value=4.2e-08 Score=65.78 Aligned_cols=47 Identities=17% Similarity=0.181 Sum_probs=41.0
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccCCcchhhhhhhcccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|+.|++.|...+.|..|+++|++++||.|+.|+..+.....+..+.
T Consensus 3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~ 49 (57)
T 1bbo_A 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM 49 (57)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHH
T ss_pred cCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHH
Confidence 58999999999999999999999999999999998877666665543
No 170
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.54 E-value=6.7e-08 Score=61.81 Aligned_cols=43 Identities=21% Similarity=0.451 Sum_probs=38.6
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
...++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2yth_A 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGG--GTTCCCSSCCC
T ss_pred CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHh--cCCCCCCCCCC
Confidence 446789999999999999999999999999999 998888 8753
No 171
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=98.54 E-value=3.4e-09 Score=78.27 Aligned_cols=73 Identities=18% Similarity=0.440 Sum_probs=59.9
Q ss_pred CC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCCcccCCcchhh
Q 018586 43 QP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAES 118 (353)
Q Consensus 43 ~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~ 118 (353)
++ .|..|++.|.....|..|+ .++.+. .|+.|+++|...+.|..|+++|++ .++.|+.|...+..
T Consensus 2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~----------~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~ 70 (88)
T 1llm_C 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPF----------ACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSK 70 (88)
T ss_dssp CCEECTTTCCEESCHHHHHHHHHHHHCCCCE----------ECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHH
T ss_pred CCCcCCCCCCccCCHHHHHHHHHHcCCCCCc----------cCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHH
Confidence 46 8999999999999999998 344333 588899999999999999999984 88999999877766
Q ss_pred hhhhcccc
Q 018586 119 QKKISGAI 126 (353)
Q Consensus 119 ~~~~~~~~ 126 (353)
...+..++
T Consensus 71 ~~~L~~H~ 78 (88)
T 1llm_C 71 NYHLENEV 78 (88)
T ss_dssp HHHHHHHH
T ss_pred HhhhHHHH
Confidence 66655544
No 172
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=98.54 E-value=3.6e-08 Score=72.49 Aligned_cols=71 Identities=21% Similarity=0.315 Sum_probs=58.3
Q ss_pred cccc--CcccCCChHHHHhcc---CCCCCCCCCCccccccccc--cccccccCchhHHHHHHHhcCCCCCCcccCCcchh
Q 018586 45 KCAV--CQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCN--LCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAE 117 (353)
Q Consensus 45 ~C~~--C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~--~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~ 117 (353)
.|.. |++.|.....|..|+ .++.+. .|+ .|++.|...+.|..|+++|++++||.|+.|+..+.
T Consensus 7 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~ 76 (89)
T 2wbs_A 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPY----------HCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS 76 (89)
T ss_dssp ECCSTTTCCEESSHHHHHHHHTTSCSSCCE----------ECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred eCCCCCCCCcCCCHHHHHHHHHhcCCCCCc----------CCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccC
Confidence 8888 999999999999998 222222 465 69999999999999999999999999999987766
Q ss_pred hhhhhccc
Q 018586 118 SQKKISGA 125 (353)
Q Consensus 118 ~~~~~~~~ 125 (353)
....+..+
T Consensus 77 ~~~~l~~H 84 (89)
T 2wbs_A 77 RSDHLALH 84 (89)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 66555443
No 173
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.54 E-value=7.5e-08 Score=59.88 Aligned_cols=39 Identities=26% Similarity=0.415 Sum_probs=35.7
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
.++|++++||.|+.|++.|...+.|..|+++ |+++++ .|
T Consensus 2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C 41 (41)
T 2ept_A 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERI--HTGSGPSSG 41 (41)
T ss_dssp CSSCCCCCCEECSSSCCEESSHHHHHHHGGG--CCCCSCSCC
T ss_pred CCccCCCCCeECCCCCCCcCCHHHHHHHHHH--hCCCCCcCC
Confidence 4679999999999999999999999999999 998887 65
No 174
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.54 E-value=8.8e-08 Score=61.73 Aligned_cols=43 Identities=23% Similarity=0.343 Sum_probs=39.6
Q ss_pred CCCCCCCCCceeec--cccccccChHHHHHHHhhhcCCCCCC-ccccC
Q 018586 5 AELPKRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP-KCAVC 49 (353)
Q Consensus 5 ~~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C 49 (353)
..++|++++||.|. .|++.|.....|..|+++ |+++++ .|..|
T Consensus 3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~C 48 (48)
T 2ent_A 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS--HSGVKPSGPSSG 48 (48)
T ss_dssp CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTT--SCCCCSCSSCCC
T ss_pred CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHH--hCCCCCCCCCCC
Confidence 45789999999998 899999999999999999 999988 99876
No 175
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=3.9e-08 Score=70.61 Aligned_cols=47 Identities=17% Similarity=0.197 Sum_probs=40.9
Q ss_pred ccccccccccCchhHHHHHHHhcC---CCCCCcccCCcchhhhhhhcccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSL---SAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~---~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|+.|++.|...+.|..|+++|++ +++|.|+.|+..+.....+..+.
T Consensus 9 ~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~ 58 (78)
T 2d9h_A 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58 (78)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHH
T ss_pred ECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHH
Confidence 588999999999999999999996 89999999998877776666554
No 176
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=7.7e-08 Score=61.53 Aligned_cols=42 Identities=21% Similarity=0.364 Sum_probs=38.2
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCC-CCC-ccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSV-HQP-KCA 47 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~-~~~-~C~ 47 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |++ +++ .|.
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~~C~ 45 (46)
T 2eoy_A 2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERI--HTRGVKSGPSS 45 (46)
T ss_dssp CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTT--CCSCCTTSSSC
T ss_pred CCccccCCCCCEECcCCCCcCCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 456889999999999999999999999999999 998 887 775
No 177
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=98.53 E-value=9.9e-08 Score=67.33 Aligned_cols=57 Identities=23% Similarity=0.519 Sum_probs=49.1
Q ss_pred CCCCCCCCCceeecc--ccccccChHHHHHHHhhhcCCCCCC-ccc--cCcccCCChHHHHhcc
Q 018586 5 AELPKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVHQP-KCA--VCQKLSKSFESLREHL 63 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~h~~~~~-~C~--~C~~~f~~~~~l~~H~ 63 (353)
....++..++|.|+. |++.|.....|..|+++ |.++++ .|. .|++.|.....|..|+
T Consensus 8 ~~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~~~~C~k~f~~~~~l~~H~ 69 (72)
T 2epa_A 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT--HTGEKPFSCSWKGCERRFARSDELSRHR 69 (72)
T ss_dssp CCCCCCCCCCEECSSTTTCCEESSHHHHHHHHHH--HSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred CCCCccccCceeCCCCCCccccCCHHHHHHHHHh--cCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence 356677889999998 99999999999999999 888888 885 4888888888888875
No 178
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.53 E-value=7.1e-08 Score=61.66 Aligned_cols=43 Identities=26% Similarity=0.448 Sum_probs=38.7
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
+..++|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~~ 45 (46)
T 2em3_A 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT--HTGEKPSGPSS 45 (46)
T ss_dssp CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHH--HCCCCCCCSCC
T ss_pred CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 346789999999999999999999999999999 888888 8753
No 179
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=8.8e-08 Score=60.58 Aligned_cols=40 Identities=18% Similarity=0.416 Sum_probs=36.8
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
..++|++++||.|+.|++.|.....|..|+++ |+++++ .|
T Consensus 3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 43 (44)
T 2yu5_A 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERT--HARKSGPSS 43 (44)
T ss_dssp CSCCCSCCCSEECSSSSCEESSSHHHHHHHHH--CCCCCSSCC
T ss_pred CccccCCCCCeECCCCCchhCCHHHHHHHhHh--cCCCCCCCC
Confidence 46789999999999999999999999999999 998887 76
No 180
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=98.53 E-value=9e-08 Score=59.78 Aligned_cols=40 Identities=20% Similarity=0.279 Sum_probs=36.5
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
.+++|++++||.|+.|++.|...+.|..|+++ |+++++ .|
T Consensus 2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~~k~~~C 42 (42)
T 2epc_A 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS--CSQSGPSSG 42 (42)
T ss_dssp CCSCCCSSCCEECSSSCCEESSHHHHHHHHHH--TTCCCCCCC
T ss_pred CCccCCCCCCeECCCCCcccCCHHHHHHHhhh--cCCCCCCCC
Confidence 35789999999999999999999999999999 998887 65
No 181
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.53 E-value=1e-07 Score=60.21 Aligned_cols=41 Identities=20% Similarity=0.371 Sum_probs=37.3
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|+
T Consensus 3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2eof_A 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRT--HTGESGPSSG 44 (44)
T ss_dssp CSSCCSCCCSEECTTTCCEESCHHHHHHHHHH--TTTSSCSCCC
T ss_pred CccCCCCCCCeECCCCCcccCCHhHHHHHHHH--hCCCCCCCCC
Confidence 46789999999999999999999999999999 998887 763
No 182
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=98.52 E-value=1.4e-08 Score=69.89 Aligned_cols=51 Identities=20% Similarity=0.337 Sum_probs=43.9
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHH
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLR 60 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~ 60 (353)
.++.|++++||.|+.|++.|...+.|. ++ |+++++ .|..|++.|....++.
T Consensus 5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~--H~~~k~~~C~~C~k~f~~~~~~~ 56 (62)
T 1vd4_A 5 DERDSTNRASFKCPVCSSTFTDLEANQ---LF--DPMTGTFRCTFCHTEVEEDESAM 56 (62)
T ss_dssp CSSSCCSSSEEECSSSCCEEEHHHHHH---HE--ETTTTEEBCSSSCCBCEECTTCS
T ss_pred HHHHcCCCCCccCCCCCchhccHHHhH---hh--cCCCCCEECCCCCCccccCcccc
Confidence 467899999999999999999988776 67 899888 9999999987766544
No 183
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=98.52 E-value=4.8e-08 Score=65.48 Aligned_cols=50 Identities=30% Similarity=0.441 Sum_probs=35.2
Q ss_pred CC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhc
Q 018586 43 QP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACS 102 (353)
Q Consensus 43 ~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~ 102 (353)
++ .|..|++.|.....|..|+ .++.+. .|+.|+++|...+.|..|+++|+
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPY----------KCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHHHHCCCCE----------ECSSSSCEESSHHHHHHHHHHHC
T ss_pred CCccCCCCcchhCChHHHHHHHHHcCCCCCc----------CCCCCcchhCCHHHHHHHHHHhc
Confidence 44 7888888888888888887 333333 46777788888888888888775
No 184
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.52 E-value=9.7e-08 Score=61.05 Aligned_cols=42 Identities=24% Similarity=0.423 Sum_probs=38.2
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
..+.|++++||.|+.|++.|...+.|.+|+++ |+++++ .|..
T Consensus 3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2em6_A 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV--HTGEKPSGPSS 45 (46)
T ss_dssp CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTT--TSSSCCCCTTC
T ss_pred CccccCCCCCeECCCCCcccCCHHHHHHHHHH--cCCCCCCCCCC
Confidence 46789999999999999999999999999999 999888 8753
No 185
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=9.3e-08 Score=60.46 Aligned_cols=42 Identities=24% Similarity=0.490 Sum_probs=38.0
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|.
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C~ 44 (44)
T 2emb_A 2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKT--HAAKSGPSSG 44 (44)
T ss_dssp CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGG--GCCCCCTTCC
T ss_pred CcccccCCCCCeECCCCCCccCCHHHHHHHHHH--cCCCCCcCCC
Confidence 456889999999999999999999999999999 998887 763
No 186
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=98.51 E-value=4.4e-08 Score=71.94 Aligned_cols=57 Identities=21% Similarity=0.323 Sum_probs=42.1
Q ss_pred CCCCCC-ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHH-HhcCCC
Q 018586 39 HSVHQP-KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKE-ACSLSA 105 (353)
Q Consensus 39 h~~~~~-~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~-~h~~~k 105 (353)
++..++ .|..|++.|..+..|..|+ .++.++ .|+.|+++|...+.|.+|++ +|++|.
T Consensus 23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~----------~C~~C~k~F~~~~~L~~H~~~~H~~E~ 84 (85)
T 2lv2_A 23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVF----------PCKYCPATFYSSPGLTRHINKCHPSEN 84 (85)
T ss_dssp CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSE----------ECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCcc----------CCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence 555566 8888888888888888887 344444 57888888888888888864 576553
No 187
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=4.2e-08 Score=62.81 Aligned_cols=43 Identities=26% Similarity=0.460 Sum_probs=38.9
Q ss_pred CCCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 3 TEAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 3 ~~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
++..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|.
T Consensus 1 ~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (46)
T 2emz_A 1 GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRL--HSREKSSGPS 44 (46)
T ss_dssp CCCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHH--HHHTTCCCSC
T ss_pred CCCCcCCCCCCCeECCCCCcccCCHHHHHHHHHH--hCCCCCCCCC
Confidence 3567899999999999999999999999999999 888887 775
No 188
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.51 E-value=5.4e-08 Score=60.86 Aligned_cols=40 Identities=25% Similarity=0.383 Sum_probs=36.3
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
.+++|++++||.|+.|++.|...+.|..|+++ |+++++ .|
T Consensus 2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2en2_A 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI--HTGSGPSSG 42 (42)
T ss_dssp CCCCCCSSCSEECTTTCCEESSHHHHHHHTHH--HHSCCSSCC
T ss_pred CCcccCCCCCEeCCCcChhhCCHHHHHHHHHH--cCCCCCCCC
Confidence 46789999999999999999999999999999 888877 65
No 189
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.50 E-value=1e-07 Score=60.90 Aligned_cols=43 Identities=23% Similarity=0.385 Sum_probs=38.7
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2ep1_A 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI--HTGENPSGPSS 45 (46)
T ss_dssp CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGG--GSSSCCCSSSC
T ss_pred ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 346789999999999999999999999999999 999888 8763
No 190
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.50 E-value=1.2e-07 Score=60.56 Aligned_cols=42 Identities=21% Similarity=0.356 Sum_probs=38.2
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cccc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAV 48 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~ 48 (353)
..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..
T Consensus 3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~~ 45 (46)
T 2eq3_A 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI--HTGKKPSGPSS 45 (46)
T ss_dssp CCCSSCCCCSSEETTTTEECSSHHHHHHHHTT--SCCCCCCCSCC
T ss_pred cccCCCCCCCeECCCCChhhCCHHHHHHHHHH--hCCCCCCCCCC
Confidence 46789999999999999999999999999999 999888 7753
No 191
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=7.6e-08 Score=60.21 Aligned_cols=39 Identities=21% Similarity=0.382 Sum_probs=35.9
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
+++|++++||.|+.|++.|...+.|..|+++ |+++++ .|
T Consensus 3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2eos_A 3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRI--HTGSGPSSG 42 (42)
T ss_dssp CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTT--TSCCSSTTC
T ss_pred CcccCCCCCEECCCCCCccCCHHHHHHHHHh--cCCCCCCCC
Confidence 5789999999999999999999999999999 998877 65
No 192
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=98.48 E-value=3.9e-08 Score=77.95 Aligned_cols=52 Identities=23% Similarity=0.503 Sum_probs=48.5
Q ss_pred CCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc
Q 018586 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL 63 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~ 63 (353)
.|++++||.|+.|++.|.....|..|+++ | +++ .|..|++.|...+.|..|+
T Consensus 68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~--H--~~~~~C~~C~k~f~~~~~l~~H~ 120 (129)
T 2wbt_A 68 ASKAISQFVCPLCLMPFSSSVSLKQHIRY--T--EHTKVCPVCKKEFTSTDSALDHV 120 (129)
T ss_dssp HHHHHCSEECTTTCCEESSHHHHHHHHHH--T--CCCCBCTTTCCBCSSHHHHHHHH
T ss_pred HhCCCCCeECCCCCcccCCHhHHHHHHHH--C--CCCCCCCCCCcccCCHHHHHHHH
Confidence 36788999999999999999999999999 8 566 9999999999999999998
No 193
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.48 E-value=7.9e-08 Score=60.03 Aligned_cols=40 Identities=25% Similarity=0.464 Sum_probs=36.4
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|
T Consensus 2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~~~~~C 42 (42)
T 2ytb_A 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV--HTGSGPSSG 42 (42)
T ss_dssp CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGG--TSCCSCCCC
T ss_pred CccccCCCCCeeCCCccchhCCHHHHHHHHHH--hCCCCCCCC
Confidence 35789999999999999999999999999999 998887 65
No 194
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.47 E-value=1.1e-07 Score=57.62 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=33.1
Q ss_pred CCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC
Q 018586 7 LPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (353)
Q Consensus 7 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~ 44 (353)
++|++++||.|+.|++.|...+.|..|+++ |++++|
T Consensus 2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~--h~~~kp 37 (37)
T 2elo_A 2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKT--NHPEVS 37 (37)
T ss_dssp CCCCCCCCCEETTTTEECSSHHHHHHHHHH--HCSSCC
T ss_pred CCCCCCCCcCCCCCCCccCCHHHHHHHHHH--HcCCCC
Confidence 679999999999999999999999999999 887654
No 195
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=98.47 E-value=1.2e-07 Score=71.25 Aligned_cols=73 Identities=19% Similarity=0.294 Sum_probs=58.9
Q ss_pred CCC-cccc--CcccCCChHHHHhcc---CCCCCCCCCCccccccccc--cccccccCchhHHHHHHHhcCCCCCCcccCC
Q 018586 42 HQP-KCAV--CQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCN--LCMNIFDSPSSLIKHKEACSLSAPVPFEKTL 113 (353)
Q Consensus 42 ~~~-~C~~--C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~--~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~ 113 (353)
.++ .|.. |++.|.....|..|+ .++.+. .|+ .|++.|.....|..|+++|++++||.|+.|+
T Consensus 13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~ 82 (100)
T 2ebt_A 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPY----------KCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82 (100)
T ss_dssp CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCE----------ECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSC
T ss_pred CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCe----------eCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCc
Confidence 344 8885 999999999999998 333322 464 6999999999999999999999999999998
Q ss_pred cchhhhhhhcc
Q 018586 114 SNAESQKKISG 124 (353)
Q Consensus 114 ~~~~~~~~~~~ 124 (353)
..+.....+..
T Consensus 83 ~~f~~~~~l~~ 93 (100)
T 2ebt_A 83 RSFSRSDHLAL 93 (100)
T ss_dssp CBCSSHHHHHH
T ss_pred CccCCHHHHHH
Confidence 77666555544
No 196
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.46 E-value=8.4e-08 Score=60.67 Aligned_cols=41 Identities=27% Similarity=0.403 Sum_probs=37.2
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
+..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|
T Consensus 2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C 43 (44)
T 2eox_A 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI--HTRKSGPSS 43 (44)
T ss_dssp CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHH--HCCCCCCSC
T ss_pred CCCcCCCCCCCeECcccCcccCCHHHHHHHHHH--hCCCCCCCC
Confidence 346789999999999999999999999999999 888877 66
No 197
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.45 E-value=1.2e-07 Score=59.91 Aligned_cols=41 Identities=22% Similarity=0.406 Sum_probs=37.3
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
..+.|++++||.|+.|++.|...+.|..|+++ |+++++ .|.
T Consensus 3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~~~C~ 44 (44)
T 2eou_A 3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQAL--HAGESGPSSG 44 (44)
T ss_dssp CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHH--HTTSCCCCCC
T ss_pred CCCCCCCCcCeECCCCCcccCCHHHHHHHHHH--HCCCCCCCCC
Confidence 46789999999999999999999999999999 898887 763
No 198
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=98.43 E-value=1.7e-07 Score=59.89 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emk_A 14 ECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp BCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999875
No 199
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.41 E-value=2.3e-07 Score=55.22 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=31.9
Q ss_pred CCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC
Q 018586 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~ 44 (353)
+|++++||.|+.|++.|...+.|..|+++ |+++++
T Consensus 1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~--h~~~kp 35 (35)
T 2elx_A 1 GSSGSSGYVCALCLKKFVSSIRLRSHIRE--VHGAAQ 35 (35)
T ss_dssp CCCCCCSEECSSSCCEESSHHHHHHHHHH--TSCTTC
T ss_pred CCCCCCCeECCCCcchhCCHHHHHHHHHH--HcCCCC
Confidence 47899999999999999999999999999 887654
No 200
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=2.1e-07 Score=59.30 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eq4_A 14 NCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG 46 (46)
T ss_dssp CBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred ECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 201
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=98.40 E-value=2.2e-07 Score=55.40 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=32.0
Q ss_pred CCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC
Q 018586 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~ 44 (353)
+|++++||.|+.|++.|...+.|..|+++ |++++|
T Consensus 1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~~~ 35 (35)
T 1srk_A 1 GSSGKRPFVCRICLSAFTTKANCARHLKV--HTDTLS 35 (35)
T ss_dssp CCSCCSCEECSSSCCEESSHHHHHHHHGG--GTSCCC
T ss_pred CCCCCcCeeCCCCCcccCCHHHHHHHHHH--cCCCCC
Confidence 58899999999999999999999999999 887654
No 202
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=1.3e-07 Score=60.34 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=37.2
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCA 47 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~ 47 (353)
..++|++++||.|+.|++.|.....|..|+++ |+++++ .|.
T Consensus 3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~--H~~~~~~~C~ 44 (46)
T 2en3_A 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS--HERTDPSGPS 44 (46)
T ss_dssp CCCCSCCCCSEECSSSCCEESSSHHHHHHHHH--HHHSCCSSCS
T ss_pred cccccCCCCCeeCcccChhhCCHHHHHHHHHH--hCCCCCCCCC
Confidence 36789999999999999999999999999999 888887 774
No 203
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.40 E-value=2.3e-07 Score=59.24 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=30.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eoq_A 14 KCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG 46 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred CCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 578899999999999999999999999999865
No 204
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=1.9e-07 Score=59.65 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=30.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emy_A 14 ECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred CCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 205
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=2.6e-07 Score=58.91 Aligned_cols=33 Identities=18% Similarity=0.155 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eov_A 14 KCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG 46 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred cCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 588899999999999999999999999999875
No 206
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.39 E-value=2.1e-07 Score=59.35 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=30.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emm_A 14 KCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred eCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999876
No 207
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=98.37 E-value=3e-07 Score=58.69 Aligned_cols=33 Identities=21% Similarity=0.219 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ely_A 14 KCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG 46 (46)
T ss_dssp CCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred ccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 208
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.37 E-value=2.4e-07 Score=59.10 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=30.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2epw_A 14 KCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred eCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588999999999999999999999999999865
No 209
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.37 E-value=3.7e-07 Score=63.25 Aligned_cols=43 Identities=26% Similarity=0.425 Sum_probs=36.7
Q ss_pred CCCCCCCCCCceeecc--ccccccChHHHHHHH-hhhcCCCCCC-cccc
Q 018586 4 EAELPKRSTARHKCVA--CYKQFKRKDHLIEHM-KISYHSVHQP-KCAV 48 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~-~~~~h~~~~~-~C~~ 48 (353)
..-..++++|||+|++ |+++|...++|.+|+ ++ |++++| .|..
T Consensus 17 ~~~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rri--HTgEKP~~~~~ 63 (73)
T 1x3c_A 17 EFPTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAV--HKSDLPAFSAE 63 (73)
T ss_dssp CCSSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHH--SSSCCCCCCCS
T ss_pred cccccccCCCCeECCCCCcChhHcCHHHHHHHhhhh--CCCCCCccccc
Confidence 3345678999999976 999999999999997 68 999998 7754
No 210
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.37 E-value=2.4e-07 Score=59.11 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=30.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|.+.+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytd_A 14 KCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred ECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 211
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2e-07 Score=59.50 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eoo_A 14 GCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred EccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 212
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2e-07 Score=59.50 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=30.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytn_A 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG 46 (46)
T ss_dssp BCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred ECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 213
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.1e-07 Score=59.37 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2emh_A 14 ICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred CCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 588999999999999999999999999999865
No 214
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.4e-07 Score=59.14 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c 46 (46)
T 2ytk_A 14 KCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred eCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 215
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.7e-07 Score=58.90 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=30.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ytj_A 14 ICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred ECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999864
No 216
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=2.5e-07 Score=58.38 Aligned_cols=33 Identities=27% Similarity=0.491 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 44 (44)
T 2emx_A 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG 44 (44)
T ss_dssp ECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred cCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 217
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.2e-07 Score=59.34 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emp_A 14 MCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 218
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.2e-07 Score=59.28 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=30.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eop_A 14 ECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG 46 (46)
T ss_dssp BCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred eCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 219
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.36 E-value=2.1e-07 Score=59.30 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=30.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eoe_A 14 KCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG 46 (46)
T ss_dssp EETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred ECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588999999999999999999999999999865
No 220
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.35 E-value=2e-07 Score=59.53 Aligned_cols=33 Identities=24% Similarity=0.349 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eml_A 14 ECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred eCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence 588899999999999999999999999999875
No 221
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.34 E-value=2.1e-07 Score=59.41 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=30.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2yu8_A 14 KCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred ECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 222
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.34 E-value=2.3e-07 Score=59.21 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ep2_A 14 ECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred CCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 223
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=98.34 E-value=2.2e-07 Score=59.30 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=30.3
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em0_A 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG 46 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence 478899999999999999999999999999865
No 224
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=98.33 E-value=2.2e-07 Score=59.29 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=30.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ema_A 14 KCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred CCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 225
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=98.33 E-value=1.8e-07 Score=59.69 Aligned_cols=33 Identities=27% Similarity=0.463 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2el4_A 14 GCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG 46 (46)
T ss_dssp ECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred ECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 226
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.33 E-value=2.6e-07 Score=58.92 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=30.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytr_A 14 KCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp CCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred CCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 478899999999999999999999999999875
No 227
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=2.1e-07 Score=59.48 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|++.|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em5_A 14 QCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred ECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999876
No 228
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=3.8e-07 Score=55.28 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=31.2
Q ss_pred CCCCCCCceeeccccccccChHHHHHH-HhhhcCCCC
Q 018586 7 LPKRSTARHKCVACYKQFKRKDHLIEH-MKISYHSVH 42 (353)
Q Consensus 7 ~~h~~~k~~~C~~C~k~f~~~~~l~~H-~~~~~h~~~ 42 (353)
++|++++||+|+.|++.|..++.|..| +++ |+++
T Consensus 2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~--H~~~ 36 (37)
T 2elm_A 2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQK--HSNI 36 (37)
T ss_dssp CSSSSSCEEECSSSSCEEECHHHHHHHHHHH--TCCC
T ss_pred CccCCCcCeECCCCCcccCCHHHHHHHHHHH--ccCc
Confidence 679999999999999999999999999 888 8764
No 229
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=4.8e-07 Score=54.30 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=31.6
Q ss_pred CCCCCCCceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 7 LPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 7 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
++|++++||+|+.|++.|...+.|..|+++ |+++
T Consensus 2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 35 (36)
T 2elq_A 2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNR--HSTE 35 (36)
T ss_dssp CSSCCCCSEECSSSSCEESCHHHHHHHHHH--SSTT
T ss_pred CCCCCCCCccCCCCCchhCCHHHHHHHHHH--hccC
Confidence 578999999999999999999999999999 8765
No 230
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.32 E-value=2.9e-07 Score=58.46 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=31.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTL 113 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~ 113 (353)
.|+.|+++|...+.|..|+++|+++++|.|+.|+
T Consensus 12 ~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg 45 (45)
T 2epq_A 12 SCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG 45 (45)
T ss_dssp EETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred cCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence 5899999999999999999999999999999874
No 231
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.32 E-value=2.8e-07 Score=58.78 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=30.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2epz_A 14 DCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG 46 (46)
T ss_dssp CCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred ECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 578899999999999999999999999999865
No 232
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=2.2e-07 Score=59.23 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2en8_A 14 TCDECGKNFCYISALRIHQRVHMGEKCSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred ECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999875
No 233
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=4.2e-07 Score=54.57 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=31.5
Q ss_pred CCCCCCCceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 7 LPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 7 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
++|++++||.|+.|++.|...+.|..|+++ |+++
T Consensus 2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 35 (36)
T 2elv_A 2 SSGSSGLLYDCHICERKFKNELDRDRHMLV--HGDK 35 (36)
T ss_dssp CCSCCCCCEECSSSCCEESSHHHHHHHHTT--TSTT
T ss_pred CCCCCCCCeECCCCCCccCCHHHHHHHHHH--hcCC
Confidence 478999999999999999999999999999 8765
No 234
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.32 E-value=2.2e-07 Score=59.27 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ene_A 14 KCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred ECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence 588899999999999999999999999999875
No 235
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=98.32 E-value=4.4e-07 Score=54.79 Aligned_cols=35 Identities=29% Similarity=0.501 Sum_probs=32.2
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCC
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSV 41 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~ 41 (353)
..++|++++||+|+.|++.|...+.|..|+++ |++
T Consensus 2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~ 36 (37)
T 1p7a_A 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR--HML 36 (37)
T ss_dssp CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG--GTC
T ss_pred CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH--hcc
Confidence 36789999999999999999999999999998 765
No 236
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=98.32 E-value=4.4e-07 Score=55.63 Aligned_cols=34 Identities=21% Similarity=0.446 Sum_probs=31.3
Q ss_pred CCCCCceeeccccccccChHHHHHHHhhhcCCCCCC
Q 018586 9 KRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (353)
Q Consensus 9 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~ 44 (353)
|++++||.|+.|++.|...+.|..|+++ |+++++
T Consensus 1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~k~ 34 (39)
T 1njq_A 1 XWPPRSYTCSFCKREFRSAQALGGHMNV--HRRDRA 34 (39)
T ss_dssp -CCSSSEECTTTCCEESSHHHHHHHHHT--TCCSCT
T ss_pred CCCCCceECCCCCcccCCHHHHHHHHHH--cCCCcc
Confidence 6789999999999999999999999999 998876
No 237
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.31 E-value=2.5e-07 Score=59.03 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2eq0_A 14 KCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 238
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.31 E-value=3.1e-07 Score=58.60 Aligned_cols=33 Identities=33% Similarity=0.423 Sum_probs=30.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytq_A 14 GCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG 46 (46)
T ss_dssp BCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred CCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 239
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.31 E-value=4.2e-08 Score=69.19 Aligned_cols=58 Identities=19% Similarity=0.269 Sum_probs=48.2
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc-----CCCCCCCCC
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL-----TGPLSKAHC 72 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~-----~~~~~c~~C 72 (353)
.+.|++++||.|+.|++.|.....|.. +++ .|..|++.|...+.|..|+ .+++.|+.|
T Consensus 10 ~~~h~~~~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C 73 (73)
T 2ctu_A 10 QKIHLGDRSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG 73 (73)
T ss_dssp CCCCCCCSEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred HHHhCCCCCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence 678999999999999999999886654 345 9999999999999999998 235556554
No 240
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.31 E-value=3.1e-07 Score=58.65 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=30.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2elz_A 14 KCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG 46 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred eCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 588899999999999999999999999999876
No 241
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.29 E-value=2.3e-07 Score=59.20 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=30.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2emf_A 14 ECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred ECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 242
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.29 E-value=4.1e-07 Score=55.82 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=30.2
Q ss_pred CCCCCCceeecc--ccccccChHHHHHHHhhhcCCCC
Q 018586 8 PKRSTARHKCVA--CYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 8 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
++++++||+|+. |+++|..++.|.+|+++ |+++
T Consensus 3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~--Htg~ 37 (38)
T 2eln_A 3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKV--HTAL 37 (38)
T ss_dssp CSSCCCCEECSSSSCCCEESCHHHHHHHHHH--HSCC
T ss_pred CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh--cCCC
Confidence 578999999986 99999999999999999 8875
No 243
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.29 E-value=3.2e-07 Score=58.48 Aligned_cols=33 Identities=18% Similarity=0.385 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|++.|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eme_A 14 VCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred ECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence 588899999999999999999999999999876
No 244
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=98.29 E-value=3.6e-07 Score=61.80 Aligned_cols=50 Identities=30% Similarity=0.513 Sum_probs=33.3
Q ss_pred ccccCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHH-HHhcCC
Q 018586 45 KCAVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHK-EACSLS 104 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~-~~h~~~ 104 (353)
.|..|++.|.....|..|+ .++.+. .|+.|++.|...+.|..|+ ++|.++
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 4 VCEVCTRAFARQEHLKRHYRSHTNEKPY----------PCGLCNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp CCTTTCCCBSCHHHHHHHHHTTTSSCSE----------ECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred cCCCCccccCCHHHHHHHHHHhCCCCCc----------cCCCCCCccCCHHHHHHHHHHHcCCc
Confidence 6777777777777777776 222222 4677777777777777775 456543
No 245
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=4e-07 Score=58.04 Aligned_cols=33 Identities=24% Similarity=0.203 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2yso_A 14 QCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred EccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 246
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.28 E-value=3.5e-07 Score=58.38 Aligned_cols=33 Identities=12% Similarity=0.039 Sum_probs=30.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em8_A 14 KCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred ECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence 588999999999999999999999999999876
No 247
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.28 E-value=3.9e-07 Score=58.11 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=30.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2en6_A 14 GCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG 46 (46)
T ss_dssp EETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred ECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence 589999999999999999999999999999865
No 248
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=98.28 E-value=2.9e-07 Score=58.66 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em9_A 14 NCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred ECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 249
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.27 E-value=2e-07 Score=59.53 Aligned_cols=33 Identities=15% Similarity=0.297 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytg_A 14 KCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp ECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999875
No 250
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.27 E-value=4e-07 Score=58.14 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytm_A 14 KCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG 46 (46)
T ss_dssp SBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred CCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 251
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.27 E-value=3e-07 Score=58.65 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2en1_A 14 KCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp EETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred eCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 252
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.26 E-value=4.8e-07 Score=57.70 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||+|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yto_A 14 KCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred ECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence 58899999999999999999999999999974
No 253
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.26 E-value=6.3e-07 Score=57.12 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=29.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||+|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eoh_A 14 ECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred CCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 47889999999999999999999999999974
No 254
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.26 E-value=3.6e-07 Score=58.29 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=30.1
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~ 46 (46)
T 2ep3_A 14 RCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred ECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999753
No 255
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=4.4e-07 Score=54.86 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=31.3
Q ss_pred CCCCCCCceeeccccccccCh-HHHHHHHhhhcCCCC
Q 018586 7 LPKRSTARHKCVACYKQFKRK-DHLIEHMKISYHSVH 42 (353)
Q Consensus 7 ~~h~~~k~~~C~~C~k~f~~~-~~l~~H~~~~~h~~~ 42 (353)
++|++++||.|+.|++.|... +.|..|+++ |+++
T Consensus 2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~--H~~~ 36 (37)
T 2elp_A 2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWA--HEGV 36 (37)
T ss_dssp CSCCCCCCEECSSSSCEECSSCHHHHHHHHH--HHTC
T ss_pred CCCCCCCCeECCCCChhhccCHHHHHHHHHh--cCCC
Confidence 579999999999999999999 999999998 7764
No 256
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.26 E-value=7.5e-07 Score=55.42 Aligned_cols=31 Identities=16% Similarity=0.433 Sum_probs=28.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|+++|...+.|..|+++|++++||+|.
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2yte_A 12 SCAECKETFSDNNRLVQHQKMHTVKSGPSSG 42 (42)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred ECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence 5888999999999999999999999999984
No 257
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=4.7e-07 Score=57.72 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||+|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2enc_A 14 KCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred CCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 258
>4gmj_B CCR4-NOT transcription complex subunit 7; mRNA decay, deadenylase, RNA bindin; HET: GOL; 2.70A {Homo sapiens}
Probab=98.25 E-value=6.6e-06 Score=73.78 Aligned_cols=158 Identities=13% Similarity=0.113 Sum_probs=100.9
Q ss_pred CCceeeccCccccccCC-----------------------CCccceeEEeeecCCCCe-------EEeeeccCCCCc-cc
Q 018586 134 GPKAVAMDCEMVGGGSN-----------------------GTLDLCARVCLVDEDENV-------IFHTYVQPQLPV-TN 182 (353)
Q Consensus 134 ~~~~~~~D~Ettg~~~~-----------------------~~~~il~~v~ivd~~g~~-------~~~~lv~P~~~i-~~ 182 (353)
..+||++|+|++|+... .++++ .+++.+.+|+. .|+-.+.+...+ .+
T Consensus 33 ~~~fVAiDtEFpGvv~rp~~~~~~t~d~~Y~~lr~nvd~l~iIQl--GLt~f~~~g~~p~~~~~wqFNF~f~~~~d~~~~ 110 (285)
T 4gmj_B 33 KYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQL--GLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQ 110 (285)
T ss_dssp HCCEEEEEEECCCCCCCCTTCCTTSTTHHHHHHHHHHTTSCCCEE--EEEEECTTSCCCSSCCEEEEEBCCCTTTSCCCH
T ss_pred cCCEEEEEEEecCccCCCCCccCCCHHHHHHHHHHHHHhhcceeE--EEEeeccCCCcCCCeeEEEEEEEeccccccccH
Confidence 34699999999996311 13333 55666777653 255555555422 22
Q ss_pred ccccc---CCCCHhh-hcCCCChHHHHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhc-----Cc-------
Q 018586 183 YRYEV---TGLTEED-IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-----MN------- 246 (353)
Q Consensus 183 ~~~~~---~GIt~e~-l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-----~~------- 246 (353)
....+ +||.=+. ...+.+..+..+-+.... ..-..+..+|.++..+|+.+|- -.
T Consensus 111 ~SI~fL~~~G~DF~k~~~~GI~~~~f~ell~~sg----------lvl~~~v~WvtfH~~yDf~yL~k~lt~~~LP~~~~e 180 (285)
T 4gmj_B 111 DSIELLTTSGIQFKKHEEEGIETQYFAELLMTSG----------VVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD 180 (285)
T ss_dssp HHHHHHHHHTCCHHHHHHHCBCHHHHHHHHHTSS----------SSSCTTCEEEESSCHHHHHHHHHHHHTSCCCSSHHH
T ss_pred HHHHHHHHcCCCHHHHHHcCCCHHHHHHHHHHhH----------HHhcCCCceEEecchhhHHHHHHHHhCCCCCCCHHH
Confidence 22222 6777443 345666554443333211 1122556777777779999876 11
Q ss_pred --------CCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhch
Q 018586 247 --------YPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 308 (353)
Q Consensus 247 --------~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~ 308 (353)
+|. +.|+..+.+.... ...+|+++|+.+ |++--+..|.|-.|+..|+.+|.++++..
T Consensus 181 F~~~l~~~FP~--vYD~K~l~~~~~~--l~ggL~~lA~~L-~v~r~g~~HqAGsDSllT~~~F~kl~~~~ 245 (285)
T 4gmj_B 181 FFEILRLFFPV--IYDVKYLMKSCKN--LKGGLQEVAEQL-ELERIGPQHQAGSDSLLTGMAFFKMREMF 245 (285)
T ss_dssp HHHHHHHHCSC--EEEHHHHGGGSTT--CCSCHHHHHHHT-TCCCCSCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCch--hhhHHHHHHhccc--cCChHHHHHHhC-CCCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 343 7888888766543 245899999998 98844448999999999999999998875
No 259
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.25 E-value=5.9e-07 Score=57.23 Aligned_cols=32 Identities=19% Similarity=0.439 Sum_probs=29.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2em3_A 14 ECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred ECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 58899999999999999999999999999974
No 260
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.24 E-value=6.1e-07 Score=56.48 Aligned_cols=31 Identities=23% Similarity=0.423 Sum_probs=29.1
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|+++|...+.|..|+++|++++||.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eof_A 14 ECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44 (44)
T ss_dssp ECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred ECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence 5889999999999999999999999999985
No 261
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.24 E-value=6.3e-07 Score=57.06 Aligned_cols=32 Identities=31% Similarity=0.394 Sum_probs=29.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eow_A 14 KCNECGKAFRARSSLAIHQATHSGEKPSGPSS 45 (46)
T ss_dssp ECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred eccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence 58899999999999999999999999999973
No 262
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.24 E-value=6.9e-07 Score=53.50 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=31.2
Q ss_pred CCCCCCCceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 7 LPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 7 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
.+|++++||.|+.|++.|.....|..|+++ |+++
T Consensus 2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 35 (36)
T 2elt_A 2 SSGSSGKPYKCPQCSYASAIKANLNVHLRK--HTGE 35 (36)
T ss_dssp CCSCCCCSEECSSSSCEESSHHHHHHHHHH--HTCC
T ss_pred CCCCCCCCCCCCCCCcccCCHHHHHHHHHH--ccCC
Confidence 468999999999999999999999999999 7765
No 263
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.24 E-value=8.1e-07 Score=56.61 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=29.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2en9_A 14 KCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45 (46)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred ECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 58889999999999999999999999999973
No 264
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=98.24 E-value=6.1e-07 Score=57.19 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=29.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||+|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emj_A 14 ECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred ECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 58889999999999999999999999999973
No 265
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=98.24 E-value=4e-07 Score=58.09 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2el6_A 14 KCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG 46 (46)
T ss_dssp ECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 266
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.23 E-value=5.9e-07 Score=57.27 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=29.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||+|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2eoz_A 14 SCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45 (46)
T ss_dssp EETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred ECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 58999999999999999999999999999974
No 267
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.23 E-value=3.4e-07 Score=58.39 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2em7_A 14 KCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred cCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 268
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=98.23 E-value=2.8e-07 Score=61.13 Aligned_cols=29 Identities=21% Similarity=0.481 Sum_probs=26.2
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~ 108 (353)
.|+.|++.|...+.|..|+++|++++||.
T Consensus 26 ~C~~C~k~f~~~~~L~~H~~~H~~~kp~~ 54 (54)
T 1yui_A 26 TCPICYAVIRQSRNLRRHLELRHFAKPGV 54 (54)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred cCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence 57889999999999999999999999874
No 269
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.23 E-value=3.2e-07 Score=59.23 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=31.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTL 113 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~ 113 (353)
.|+.|++.|...+.|..|+++|++++||.|+.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~ 47 (48)
T 2epr_A 14 ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47 (48)
T ss_dssp EETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred eCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence 5899999999999999999999999999999884
No 270
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.23 E-value=5.5e-07 Score=57.37 Aligned_cols=32 Identities=25% Similarity=0.476 Sum_probs=29.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enf_A 14 KCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred ECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence 58889999999999999999999999999973
No 271
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=98.22 E-value=3.7e-07 Score=64.42 Aligned_cols=54 Identities=24% Similarity=0.528 Sum_probs=39.7
Q ss_pred CCCCCC-ccc--cCcccCCChHHHHhcc---CCCCCCCCCCccccccccccccccccCchhHHHHHHHhc
Q 018586 39 HSVHQP-KCA--VCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACS 102 (353)
Q Consensus 39 h~~~~~-~C~--~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~ 102 (353)
|+++++ .|. .|++.|.....|..|+ .++.++ .|+.|+++|...+.|..|+++|+
T Consensus 14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~----------~C~~C~~~f~~~~~l~~H~~~Ht 73 (73)
T 1f2i_G 14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPF----------QCRICMRNFSRSDHLTTHIRTHT 73 (73)
T ss_dssp CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCE----------ECTTTCCEESCHHHHHHHHTTCC
T ss_pred CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCe----------ECCCCCchhCCHHHHHHHHHhcC
Confidence 667777 886 5888888888888887 333333 47778888888888888887764
No 272
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.22 E-value=4.8e-07 Score=57.68 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=29.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytp_A 14 ECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred ECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 58899999999999999999999999999974
No 273
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.22 E-value=6.4e-07 Score=56.99 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=29.1
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|++.|...+.|..|+++|++++||.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2ep1_A 14 ECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred CCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence 5788999999999999999999999999997
No 274
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.22 E-value=5.5e-07 Score=56.66 Aligned_cols=31 Identities=29% Similarity=0.316 Sum_probs=28.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|++.|...+.|..|+++|++++||+|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2en7_A 14 VCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44 (44)
T ss_dssp CCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred ECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence 4788999999999999999999999999985
No 275
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.21 E-value=6.4e-07 Score=57.11 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=29.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em6_A 14 KCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 58889999999999999999999999999973
No 276
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.21 E-value=6.6e-07 Score=57.19 Aligned_cols=33 Identities=24% Similarity=0.271 Sum_probs=30.5
Q ss_pred ccccccccccCchhHHHHHH-HhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKE-ACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~-~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|++ +|++++||.|+.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C 47 (47)
T 2epx_A 14 ECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG 47 (47)
T ss_dssp CCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred ECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence 57889999999999999999 9999999999865
No 277
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.21 E-value=8.6e-07 Score=55.84 Aligned_cols=31 Identities=16% Similarity=0.382 Sum_probs=29.0
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|+++|...+.|..|+++|++++||+|.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2yu5_A 14 KCSKCDRVFTQRNYLVQHERTHARKSGPSSG 44 (44)
T ss_dssp ECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred ECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence 5889999999999999999999999999984
No 278
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.21 E-value=3.9e-07 Score=58.09 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=30.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ysp_A 14 KCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG 46 (46)
T ss_dssp EETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred ECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence 589999999999999999999999999999875
No 279
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.21 E-value=6.5e-07 Score=57.02 Aligned_cols=32 Identities=25% Similarity=0.435 Sum_probs=29.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yti_A 14 KCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred ECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence 58889999999999999999999999999973
No 280
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.20 E-value=7.1e-07 Score=56.85 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=29.2
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|++.|...+.|..|+++|++++||+|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (46)
T 2emg_A 14 ICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44 (46)
T ss_dssp BCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred ECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 5888999999999999999999999999997
No 281
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.20 E-value=3.7e-07 Score=58.26 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=30.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|+++|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytt_A 14 QCSECGKSFSGSYRLTQHWITHTREKPSGPSSG 46 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred eCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence 488899999999999999999999999999865
No 282
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.20 E-value=6e-07 Score=57.19 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=29.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq2_A 14 QCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45 (46)
T ss_dssp SCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 47889999999999999999999999999973
No 283
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=98.20 E-value=3.9e-07 Score=66.03 Aligned_cols=66 Identities=26% Similarity=0.359 Sum_probs=52.6
Q ss_pred cc--ccCcccCCChHHHHhcc---CCCCCCCCCCcccccccccc--ccccccCchhHHHHHHHhcCCCCCCccc---CCc
Q 018586 45 KC--AVCQKLSKSFESLREHL---TGPLSKAHCSGIFSDRGCNL--CMNIFDSPSSLIKHKEACSLSAPVPFEK---TLS 114 (353)
Q Consensus 45 ~C--~~C~~~f~~~~~l~~H~---~~~~~c~~Cgk~f~~~~C~~--C~k~F~~~s~L~~H~~~h~~~k~~~c~~---~~~ 114 (353)
.| ..|++.|.....|..|+ .++.+. .|+. |+++|...+.|..|+++|++ |+|+. |+.
T Consensus 3 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~----------~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~ 69 (85)
T 2j7j_A 3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPY----------ECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSF 69 (85)
T ss_dssp ECCSTTCCCEESSHHHHHHHHHHHHTTCCE----------ECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCC
T ss_pred cCCCCCCCcccCCHHHHHHHHHHhCCCCCe----------eCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCC
Confidence 68 88999999999999998 333332 5777 99999999999999999998 88888 766
Q ss_pred chhhhhhhc
Q 018586 115 NAESQKKIS 123 (353)
Q Consensus 115 ~~~~~~~~~ 123 (353)
.+.....+.
T Consensus 70 ~f~~~~~l~ 78 (85)
T 2j7j_A 70 VGKTWTLYL 78 (85)
T ss_dssp EESSHHHHH
T ss_pred ccCCHHHHH
Confidence 655444443
No 284
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.19 E-value=6.4e-07 Score=56.99 Aligned_cols=32 Identities=25% Similarity=0.463 Sum_probs=29.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2ytf_A 14 ECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred CCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 58889999999999999999999999999973
No 285
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.19 E-value=8.3e-07 Score=55.74 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=29.1
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|++.|...+.|..|+++|++++||.|+
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 42 (43)
T 2yrm_A 12 FCNECDCRFSEEASLKRHTLQTHSDKSGPSS 42 (43)
T ss_dssp CCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred ECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence 5888999999999999999999999999996
No 286
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.19 E-value=7.6e-07 Score=56.68 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=29.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq1_A 14 KCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS 45 (46)
T ss_dssp CCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred ECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 57889999999999999999999999999973
No 287
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.18 E-value=5.3e-07 Score=57.45 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=30.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ep0_A 14 KCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred eCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999865
No 288
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.18 E-value=8.6e-07 Score=55.89 Aligned_cols=31 Identities=26% Similarity=0.367 Sum_probs=28.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|++.|...+.|..|+++|++++||+|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~ 44 (44)
T 2eou_A 14 ECQECGKIFRHSSLLIEHQALHAGESGPSSG 44 (44)
T ss_dssp CCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence 4888999999999999999999999999985
No 289
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.18 E-value=9.3e-07 Score=56.32 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=30.2
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|+.|++.|...+.|..|+++|++++||+|+.+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~ 46 (46)
T 2em2_A 14 KCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG 46 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred ECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 588899999999999999999999999999753
No 290
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.18 E-value=7.5e-07 Score=56.77 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=29.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yth_A 14 QCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45 (46)
T ss_dssp CCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred CCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 58889999999999999999999999999973
No 291
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.17 E-value=1.2e-06 Score=52.37 Aligned_cols=34 Identities=32% Similarity=0.490 Sum_probs=31.1
Q ss_pred CCCCCCCceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 7 LPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 7 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
.+|++++||.|+.|++.|.....|..|+++ |+++
T Consensus 2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~--H~~e 35 (36)
T 2elr_A 2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLL--HTAD 35 (36)
T ss_dssp CCCCCCSSCBCTTTCCBCSSHHHHHHHHHH--HSSC
T ss_pred CCCCCCCCeecCcCCCCcCchHHHHHHHHH--hcCC
Confidence 368899999999999999999999999999 8765
No 292
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.17 E-value=7.4e-07 Score=56.74 Aligned_cols=32 Identities=25% Similarity=0.328 Sum_probs=29.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~ 45 (46)
T 2en3_A 14 QCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred eCcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 58899999999999999999999999999974
No 293
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=98.17 E-value=6.4e-07 Score=55.80 Aligned_cols=31 Identities=19% Similarity=0.352 Sum_probs=29.0
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|+++|...+.|..|+++|++++||.|+
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 42 (42)
T 2el5_A 12 ECSECGKAFNRKDQLISHQRTHAGESGPSSG 42 (42)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred cCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence 5889999999999999999999999999985
No 294
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.17 E-value=8.1e-07 Score=56.53 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=29.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eq3_A 14 ECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45 (46)
T ss_dssp EETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred ECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 58899999999999999999999999999974
No 295
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=98.17 E-value=1e-06 Score=56.90 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=29.9
Q ss_pred CCCCCCceeeccccccccChHHHHHHHh-hhcCCCCCC
Q 018586 8 PKRSTARHKCVACYKQFKRKDHLIEHMK-ISYHSVHQP 44 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~~~h~~~~~ 44 (353)
+|++++||.|..|++.|.....|..|++ + |+++..
T Consensus 1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~--H~~e~~ 36 (48)
T 3iuf_A 1 GEDRDKPYACDICGKRYKNRPGLSYHYAHS--HLAEEE 36 (48)
T ss_dssp -CTTTSCEECTTTCCEESSHHHHHHHHHHS--SCC---
T ss_pred CCCCCcCEECCCcCcccCCHHHHHHHhhhh--cCCCCC
Confidence 4899999999999999999999999999 8 887655
No 296
>4dfk_A DNA polymerase I, thermostable; DNA polymerase, transferase-DNA complex; HET: DNA DOC 0L5; 1.65A {Thermus aquaticus} PDB: 1jxe_A* 3ktq_A* 3lwl_A* 3lwm_A* 3m8s_A* 3m8r_A* 3oju_A* 3rr7_A* 3rr8_A* 3rrg_A* 3ojs_A* 3rtv_A* 3sv3_A* 3sv4_A* 3syz_A* 3sz2_A* 3t3f_A* 4df4_A* 4df8_A* 4dfj_A* ...
Probab=98.16 E-value=9.2e-07 Score=86.75 Aligned_cols=123 Identities=14% Similarity=0.104 Sum_probs=90.6
Q ss_pred ccCCCceeeccCccccccCCCCccceeEEeeecCCCCeEEeeeccCCCCccccccccCCCCHhhhcCCCChHHHHHHHHH
Q 018586 131 TCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILE 210 (353)
Q Consensus 131 ~~~~~~~~~~D~Ettg~~~~~~~~il~~v~ivd~~g~~~~~~lv~P~~~i~~~~~~~~GIt~e~l~~~~~~~~v~~~~~~ 210 (353)
++++++.+++|+|+.+.+.-.. ++ ..+.+.. .|+ .| ++ . ++++.|.+
T Consensus 6 ~~~~p~~valDtE~~~~~~~~a-~L-vgi~la~-~~~-a~--~i----------------~-----------~~l~~l~~ 52 (540)
T 4dfk_A 6 PWPPPEGAFVGFVLSRKEPMWA-DL-LALAAAR-GGR-VH--RA----------------P-----------EPYKALRD 52 (540)
T ss_dssp CSCCCTTCEEEEEESSSCTTTC-CE-EEEEEEE-TTE-EE--EC----------------S-----------SHHHHHTT
T ss_pred CCCCCCceEEEEEecCCccCcc-cE-EEEEEEc-CCE-EE--Ee----------------h-----------hhHHHHHH
Confidence 4566678999999999753322 23 3455532 232 22 11 0 35677888
Q ss_pred HHhcCCCCcccccCCCCCcEEEecccHHHHHHhcCcCCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCCCCh
Q 018586 211 ILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDP 290 (353)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~A 290 (353)
|+ ++.++|+||+.||+.-.++..+ .++||+..+..+.|. +++|++|++.|++. + .|.|
T Consensus 53 ~l--------------~d~~kV~hn~K~Dl~~~Gi~~~--~~fDT~laAyLL~p~--~~~L~~La~~yl~~-~---gk~a 110 (540)
T 4dfk_A 53 LK--------------EARGLLAKDLSVLALREGLGLP--PGDDPMLLAYLLDPS--NTTPEGVARRYGGE-W---TEEA 110 (540)
T ss_dssp CS--------------SBCSTTHHHHHHHHHHTTCCCC--BCCCHHHHHHHHCTT--CCCHHHHHHHHTSC-C---CSCH
T ss_pred HH--------------cCCCEEEeccHHHHHHcCCCCC--cceeHHHHHHHhCCC--CCCHHHHHHHHhhh-h---ccch
Confidence 88 5578899999999993333333 578999999999887 89999999999766 2 5789
Q ss_pred HHHHHHHHHHHHHHHhch
Q 018586 291 YEDCVSVMRLYKRFRRQD 308 (353)
Q Consensus 291 l~Da~~t~~l~~~~~~~~ 308 (353)
.+||.+|++||..+..++
T Consensus 111 ~~DA~~t~~L~~~L~~~L 128 (540)
T 4dfk_A 111 GERAALSERLFANLWGRL 128 (540)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998876
No 297
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.16 E-value=7.1e-07 Score=56.78 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=29.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||+|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2yrj_A 14 RCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred ECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence 58889999999999999999999999999973
No 298
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=8.8e-07 Score=56.42 Aligned_cols=32 Identities=28% Similarity=0.401 Sum_probs=29.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2em4_A 14 ECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred CCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence 58899999999999999999999999999973
No 299
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.16 E-value=8.6e-07 Score=56.47 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=29.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emz_A 14 KCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred ECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence 57889999999999999999999999999973
No 300
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.16 E-value=2.1e-06 Score=59.53 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=37.9
Q ss_pred CCCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCCccccCc
Q 018586 4 EAELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQPKCAVCQ 50 (353)
Q Consensus 4 ~~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~~C~~C~ 50 (353)
+....|++++||+|..|++.|...+.|.+|+++ |+++...+..+.
T Consensus 3 ~~~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~--Htg~~~~~~~~~ 47 (66)
T 2epp_A 3 SGSSGLREAGILPCGLCGKVFTDANRLRQHEAQ--HGVTSLQLGYID 47 (66)
T ss_dssp CCSCSCCCCCCCCCTTTCCCCSCHHHHHHHHHH--HTTTSCCCCSCC
T ss_pred CCCCCCCCccCcCCCCCCCccCCHHHHHhhhhh--hCCCcccccccc
Confidence 456678999999999999999999999999999 888665555444
No 301
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.16 E-value=6.4e-07 Score=57.00 Aligned_cols=32 Identities=25% Similarity=0.305 Sum_probs=29.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|+++|...+.|..|+++|++++||+|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~ 45 (46)
T 2yts_A 14 ICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred ECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence 58889999999999999999999999999973
No 302
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=1.1e-06 Score=56.04 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=29.2
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|++.|...+.|..|+++|++++||+|.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (46)
T 2eom_A 14 RCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44 (46)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred CCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence 5888999999999999999999999999996
No 303
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.15 E-value=8e-07 Score=55.94 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=28.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|+++|...+.|..|+++|++++||+|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eoj_A 14 ECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44 (44)
T ss_dssp EETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred eCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence 5889999999999999999999999999985
No 304
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=98.15 E-value=1.1e-06 Score=54.71 Aligned_cols=30 Identities=33% Similarity=0.544 Sum_probs=28.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
.|+.|+++|...+.|..|+++|++++||+|
T Consensus 13 ~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C 42 (42)
T 2epc_A 13 LCGQCGKSFTQRGSLAVHQRSCSQSGPSSG 42 (42)
T ss_dssp ECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred ECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence 588999999999999999999999999987
No 305
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.14 E-value=1.4e-06 Score=52.15 Aligned_cols=33 Identities=33% Similarity=0.509 Sum_probs=30.4
Q ss_pred CCCCCCceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 8 PKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
+|++++||.|+.|++.|.....|..|+++ |+++
T Consensus 3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 35 (36)
T 2els_A 3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRI--HTNE 35 (36)
T ss_dssp TTSCCCCEECTTTCCEESSHHHHHHHHHH--HCCC
T ss_pred CCCCCCCEECCCCCceeCCHHHHHHHHHH--hCCC
Confidence 57899999999999999999999999999 7765
No 306
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.13 E-value=1e-06 Score=56.01 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=29.3
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|++.|...+.|..|+++|++++||.|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~ 44 (46)
T 2eor_A 14 NCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44 (46)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred cCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence 5888999999999999999999999999997
No 307
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.13 E-value=7.9e-07 Score=56.64 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=29.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2enh_A 14 ECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45 (46)
T ss_dssp BCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred CCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence 58889999999999999999999999999974
No 308
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.13 E-value=6e-07 Score=55.89 Aligned_cols=30 Identities=30% Similarity=0.443 Sum_probs=27.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
.|+.|+++|...+.|..|+++|++++||+|
T Consensus 13 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2ytb_A 13 RCDQCGKAFSQKGSLIVHIRVHTGSGPSSG 42 (42)
T ss_dssp CCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred eCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence 578899999999999999999999999987
No 309
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.11 E-value=9.8e-07 Score=56.16 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=29.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2emi_A 14 ECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45 (46)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred CCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence 58899999999999999999999999999973
No 310
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.11 E-value=8.6e-07 Score=65.46 Aligned_cols=46 Identities=15% Similarity=0.358 Sum_probs=41.1
Q ss_pred CCCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCccc
Q 018586 5 AELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKL 52 (353)
Q Consensus 5 ~~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~ 52 (353)
..++|++++||.|+.|++.|...+.|..|+++ |+++++ .|..|...
T Consensus 16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~--Ht~ekp~~C~~~~~~ 62 (88)
T 1x6f_A 16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNI--HNEEFQKRAKRQERR 62 (88)
T ss_dssp CCCSCCCCSCEECSSSCCEESSHHHHHHHHHH--HHHHHHHHCCCCSCC
T ss_pred cccccCCCCCCcCCCCCCEeCCHHHHHHHHHH--hCCCCCcccchhhhH
Confidence 35779999999999999999999999999999 998888 98877644
No 311
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.10 E-value=1.1e-06 Score=55.25 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=29.0
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|+++|...+.|..|+++|++++||.|.
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2eox_A 14 NCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44 (44)
T ss_dssp EETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred ECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence 5899999999999999999999999999984
No 312
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.10 E-value=8.7e-07 Score=56.16 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=29.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|++.|...+.|..|+++|++++||+|+
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~ 44 (45)
T 2epu_A 14 ECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44 (45)
T ss_dssp EETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred cCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence 5899999999999999999999999999996
No 313
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=98.09 E-value=1.7e-06 Score=50.91 Aligned_cols=29 Identities=24% Similarity=0.304 Sum_probs=27.0
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVP 108 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~ 108 (353)
.|+.|++.|...+.|..|+++|++++||.
T Consensus 4 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~ 32 (33)
T 1rim_A 4 ACPECPKRFMRSDHLSKHITLHELLGEER 32 (33)
T ss_dssp CCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred cCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence 58899999999999999999999999975
No 314
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.08 E-value=8.6e-07 Score=54.90 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=28.3
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
.|+.|+++|...+.|..|+++|++++||.|
T Consensus 12 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C 41 (41)
T 2ept_A 12 ECQECGKSFRQKGSLTLHERIHTGSGPSSG 41 (41)
T ss_dssp ECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred ECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence 588999999999999999999999999987
No 315
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.07 E-value=1.2e-06 Score=54.57 Aligned_cols=30 Identities=23% Similarity=0.234 Sum_probs=28.3
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
.|+.|+++|.+.+.|..|+++|++++||+|
T Consensus 13 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2en2_A 13 KCETCGARFVQVAHLRAHVLIHTGSGPSSG 42 (42)
T ss_dssp ECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred eCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence 588999999999999999999999999987
No 316
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.07 E-value=1.1e-06 Score=55.31 Aligned_cols=31 Identities=19% Similarity=0.401 Sum_probs=29.0
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|+++|...+.|..|+++|++++||+|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~ 44 (44)
T 2emb_A 14 ECSKCQATFNLRKHLIQHQKTHAAKSGPSSG 44 (44)
T ss_dssp ECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred ECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence 5889999999999999999999999999985
No 317
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.06 E-value=1.5e-06 Score=57.49 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=31.8
Q ss_pred ccccccccccCchhHHHHHH-HhcCCCCCCcccCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKE-ACSLSAPVPFEKTLSN 115 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~-~h~~~k~~~c~~~~~~ 115 (353)
.|+.|++.|...+.|..|++ +|++++||.|+.|+..
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~ 50 (54)
T 2eps_A 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSG 50 (54)
T ss_dssp ECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCS
T ss_pred ECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCC
Confidence 58889999999999999987 8999999999998654
No 318
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=98.06 E-value=9.7e-07 Score=56.26 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=29.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~ 45 (46)
T 2eon_A 14 KCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45 (46)
T ss_dssp BCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred CCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence 58889999999999999999999999999973
No 319
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.05 E-value=2.8e-06 Score=58.90 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=29.0
Q ss_pred ccc--cccccccCchhHHHHH-HHhcCCCCCCcccC
Q 018586 80 GCN--LCMNIFDSPSSLIKHK-EACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~--~C~k~F~~~s~L~~H~-~~h~~~k~~~c~~~ 112 (353)
.|+ .|+++|.+.++|+.|+ ++|+++|||.|-+.
T Consensus 29 kC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~ 64 (73)
T 1x3c_A 29 RCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV 64 (73)
T ss_dssp BCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred ECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence 465 5999999999999997 68999999999764
No 320
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.02 E-value=1.2e-06 Score=54.49 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=27.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
.|+.|+++|...+.|..|+++|++++||+|
T Consensus 13 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C 42 (42)
T 2eos_A 13 PCEICGTRFRHLQTLKSHLRIHTGSGPSSG 42 (42)
T ss_dssp CCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred ECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence 478899999999999999999999999987
No 321
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=98.02 E-value=1.4e-06 Score=61.61 Aligned_cols=47 Identities=15% Similarity=0.228 Sum_probs=40.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccCCcchhhhhhhcccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~~~~~~~~~~~ 126 (353)
.|+.|++.|...+.|..|+++|++++||+|+.|+..+.....+..+.
T Consensus 19 ~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~ 65 (74)
T 2lce_A 19 KCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65 (74)
T ss_dssp CCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHH
T ss_pred ECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHH
Confidence 58889999999999999999999999999999988776666665543
No 322
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.01 E-value=1.8e-06 Score=54.95 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=29.1
Q ss_pred ccccccccccCchhHHHHHHHhcC-CCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSL-SAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~-~k~~~c~ 110 (353)
.|+.|+++|...+.|..|+++|++ ++||+|+
T Consensus 14 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~ 45 (46)
T 2eoy_A 14 KCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS 45 (46)
T ss_dssp ECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred ECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence 588999999999999999999999 9999996
No 323
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=98.01 E-value=2.7e-06 Score=51.59 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=30.6
Q ss_pred CCCCCceeec--cccccccChHHHHHHHhhhcCCCCCC
Q 018586 9 KRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQP 44 (353)
Q Consensus 9 h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~~~ 44 (353)
|++++||.|+ .|++.|...+.|.+|+++ |+++++
T Consensus 1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k~ 36 (38)
T 1bhi_A 1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHK--HEMTLK 36 (38)
T ss_dssp CTTCCCEECCCTTTCCEESSHHHHHHHHHH--HHTTTT
T ss_pred CCCCcceECCCCCCCcccCCHHHHHHHHHH--hCCCCC
Confidence 6789999999 599999999999999999 877654
No 324
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=97.99 E-value=3.5e-06 Score=50.90 Aligned_cols=29 Identities=24% Similarity=0.374 Sum_probs=26.3
Q ss_pred CCCCCCceeeccccccccChHHHHHHHhh
Q 018586 8 PKRSTARHKCVACYKQFKRKDHLIEHMKI 36 (353)
Q Consensus 8 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (353)
++.++|||+|+.|+++|.++++|.+|+..
T Consensus 2 ~~~gekp~~C~~CgK~F~~~s~L~~H~py 30 (36)
T 1fv5_A 2 SLLKPARFMCLPCGIAFSSPSTLEAHQAY 30 (36)
T ss_dssp CSSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred CCCCccCeECCCCCCccCCHhHccCcCCe
Confidence 46799999999999999999999999854
No 325
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=97.98 E-value=3.4e-06 Score=50.94 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=29.9
Q ss_pred CCCCCCceeec--cccccccChHHHHHHHhhhcCCCC
Q 018586 8 PKRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 8 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
.|++++||.|. .|++.|...+.|..|+++ |+++
T Consensus 2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~--H~~e 36 (37)
T 1va1_A 2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRW--HTGE 36 (37)
T ss_dssp CSSSCCCEECCSTTCCCEESCHHHHHHHHHH--HHTT
T ss_pred CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh--cCCC
Confidence 47899999999 499999999999999999 8765
No 326
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=97.96 E-value=3.7e-06 Score=49.39 Aligned_cols=30 Identities=33% Similarity=0.703 Sum_probs=27.9
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~ 44 (353)
+||.|+.|++.|...+.|..|+++ |+++++
T Consensus 1 kp~~C~~C~k~F~~~~~L~~H~~~--H~~~~~ 30 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHLSKHITL--HELLGE 30 (33)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHHH--HTTTCC
T ss_pred CcccCCCCCchhCCHHHHHHHHHH--hCCCCC
Confidence 589999999999999999999999 888776
No 327
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.96 E-value=2.7e-06 Score=54.51 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.2
Q ss_pred ccc--cccccccCchhHHHHHHHhcCCCCCCcccC
Q 018586 80 GCN--LCMNIFDSPSSLIKHKEACSLSAPVPFEKT 112 (353)
Q Consensus 80 ~C~--~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~ 112 (353)
.|. .|++.|...+.|..|+++|++++||+|..|
T Consensus 14 ~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C 48 (48)
T 2ent_A 14 ACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG 48 (48)
T ss_dssp ECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred ECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence 476 899999999999999999999999999865
No 328
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=97.96 E-value=3.1e-06 Score=51.66 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=28.2
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
.|+.|++.|...+.|..|+++|++++||.+
T Consensus 8 ~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~ 37 (39)
T 1njq_A 8 TCSFCKREFRSAQALGGHMNVHRRDRARLR 37 (39)
T ss_dssp ECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred ECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence 589999999999999999999999999876
No 329
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=97.95 E-value=3.3e-06 Score=55.81 Aligned_cols=37 Identities=19% Similarity=0.500 Sum_probs=31.4
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~ 44 (353)
.+.|++++||.|+.|++.|...+.|..|+++ |+++++
T Consensus 16 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~--H~~~kp 52 (54)
T 1yui_A 16 RSRSQSEQPATCPICYAVIRQSRNLRRHLEL--RHFAKP 52 (54)
T ss_dssp HHHHTSSCCEECTTTCCEESSHHHHHHHHHH--HTTTSC
T ss_pred HHhcCCCCCccCCCCCcccCCHHHHHHHHHH--hccCCC
Confidence 4567889999999999999999999999998 887654
No 330
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.92 E-value=3.5e-06 Score=53.03 Aligned_cols=30 Identities=27% Similarity=0.260 Sum_probs=28.1
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPF 109 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c 109 (353)
.|+.|++.|...+.|..|+++|++++||.|
T Consensus 14 ~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~ 43 (44)
T 2epv_A 14 ECNECGKAFIWKSLLIVHERTHAGVSGPSS 43 (44)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred ECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence 588999999999999999999999999987
No 331
>3saf_A Exosome component 10; exoribonuclease, RNA exosome, hydrolase; 2.50A {Homo sapiens} PDB: 3sag_A 3sah_A 2cpr_A
Probab=97.88 E-value=5.1e-05 Score=72.24 Aligned_cols=83 Identities=22% Similarity=0.268 Sum_probs=64.3
Q ss_pred CCCcEEEecccHHHHHHhc--CcCCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCC---------------C
Q 018586 226 GKARLLVGHGLEHDLDSLR--MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV---------------H 288 (353)
Q Consensus 226 ~~~~~lvgh~~~~D~~~l~--~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~---------------H 288 (353)
+.+.+-||||+.+|+.+|. .+.....++||+..+..+.+. +++|+.|++.|||+.+..+. .
T Consensus 180 dp~i~KV~H~~k~Dl~~L~~~~Gi~~~~~fDT~lAa~lL~~~--~~gL~~Lv~~~Lg~~l~K~~~~sdW~~rpLs~~q~~ 257 (428)
T 3saf_A 180 DPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLG--RHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLS 257 (428)
T ss_dssp CTTSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHHHHHTTCS--CCSHHHHHHHHHCCCCCCTTTTSCTTCSSCCHHHHH
T ss_pred CCCceEEEeehHHHHHHHHHHcCCCcCceeechhHHHHhCCC--CCCHHHHHHHHcCCCCCccccccccccCCCCHHHHH
Confidence 3556789999999999994 333334589999877666543 57999999999998876541 2
Q ss_pred ChHHHHHHHHHHHHHHHhchhh
Q 018586 289 DPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 289 ~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
-|..||..+..||..+..+..+
T Consensus 258 YAA~DA~~ll~L~~~L~~~L~~ 279 (428)
T 3saf_A 258 YARDDTHYLLYIYDKMRLEMWE 279 (428)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3678999999999999888665
No 332
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.87 E-value=1e-05 Score=57.57 Aligned_cols=39 Identities=28% Similarity=0.512 Sum_probs=35.6
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-cc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KC 46 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C 46 (353)
.+.|++++||.|+.|++.|.....|..|+++ |+++++ .|
T Consensus 38 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~--H~~~~p~~C 77 (77)
T 2cot_A 38 RRTHTGEKPYKCDECGKAFIQRSHLIGHHRV--HTGSGPSSG 77 (77)
T ss_dssp HTTTCCSCSEECSSSCCEESSHHHHHHHGGG--SCCCCCCCC
T ss_pred HHHcCCCcCeeCCCCCCccCCHHHHHHHHHH--hCCCCCCCC
Confidence 4679999999999999999999999999999 998887 65
No 333
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.84 E-value=1.1e-05 Score=45.51 Aligned_cols=29 Identities=17% Similarity=0.430 Sum_probs=26.6
Q ss_pred CCceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
++||.|+.|++.|.....|..|+++ |+++
T Consensus 1 ~k~~~C~~C~~~f~~~~~l~~H~~~--h~~~ 29 (30)
T 2m0d_A 1 MKPYQCDYCGRSFSDPTSKMRHLET--HDTD 29 (30)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHT--TCCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHH--hccC
Confidence 4799999999999999999999998 8765
No 334
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.80 E-value=1.1e-05 Score=44.71 Aligned_cols=25 Identities=20% Similarity=0.329 Sum_probs=23.6
Q ss_pred CCceeeccccccccChHHHHHHHhh
Q 018586 12 TARHKCVACYKQFKRKDHLIEHMKI 36 (353)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (353)
++||+|+.|++.|...+.|..|+++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 1 AAPYRCPLCRAGCPSLASMQAHMRG 25 (27)
T ss_dssp CCTEEETTTTEEESCHHHHHHHHTT
T ss_pred CcCcCCCCCCcccCCHHHHHHHHHh
Confidence 4799999999999999999999988
No 335
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.79 E-value=1.4e-05 Score=44.20 Aligned_cols=27 Identities=15% Similarity=0.445 Sum_probs=24.8
Q ss_pred CCceeeccccccccChHHHHHHHhhhcCC
Q 018586 12 TARHKCVACYKQFKRKDHLIEHMKISYHS 40 (353)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~h~ 40 (353)
++||.|+.|++.|...+.|..|+++ |+
T Consensus 1 ek~~~C~~C~k~f~~~~~l~~H~~~--H~ 27 (27)
T 2kvh_A 1 EKPFSCSLCPQRSRDFSAMTKHLRT--HG 27 (27)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHH--CC
T ss_pred CcCccCCCcChhhCCHHHHHHHHHH--cc
Confidence 4799999999999999999999998 64
No 336
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.78 E-value=1.2e-05 Score=45.17 Aligned_cols=28 Identities=36% Similarity=0.694 Sum_probs=25.8
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
+||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 28 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHLTLHILL--HENK 28 (29)
T ss_dssp CCEECSSSSCEESCSHHHHHHHTG--GGSC
T ss_pred CCccCCCCCchhCCHHHHHHHHHH--hcCC
Confidence 589999999999999999999999 8765
No 337
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.77 E-value=1.2e-05 Score=60.88 Aligned_cols=40 Identities=30% Similarity=0.422 Sum_probs=36.2
Q ss_pred CCCCceeeccccccccChHHHHHH-HhhhcCCCCCC-ccccCcc
Q 018586 10 RSTARHKCVACYKQFKRKDHLIEH-MKISYHSVHQP-KCAVCQK 51 (353)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H-~~~~~h~~~~~-~C~~C~~ 51 (353)
++++||.|+.||+.|...+.|..| +++ |+++++ .|..+..
T Consensus 46 ~~ekpf~C~~Cgk~F~~~~~L~~H~~r~--Htgekpy~C~~~~~ 87 (102)
T 2ghf_A 46 VLNSSYVCVECNFLTKRYDALSEHNLKY--HPGEENFKLTMVKR 87 (102)
T ss_dssp CCSCCEEETTTTEEESSTHHHHTHHHHT--STTCCCEEEEECCC
T ss_pred CCCCCcCCCCCCcccCCHHHHHHHHHHh--cCCCCCeeCCcccC
Confidence 578999999999999999999999 788 999999 9987553
No 338
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.76 E-value=5.7e-06 Score=52.97 Aligned_cols=36 Identities=22% Similarity=0.514 Sum_probs=32.0
Q ss_pred CCCCCCCCceeec--cccccccChHHHHHHHhhhcCCCCC
Q 018586 6 ELPKRSTARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (353)
Q Consensus 6 ~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~~ 43 (353)
...|++++||.|+ .|++.|...++|.+|+++ |++++
T Consensus 10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~--H~~ek 47 (47)
T 1ncs_A 10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT--HLEDR 47 (47)
T ss_dssp SCEEETTTEEECCCTTCCCEECSSSSHHHHHHH--HTTTC
T ss_pred HhccCCCCCeECCCCCCCCccCCHHHHHHHHHH--ccCCC
Confidence 5679999999996 799999999999999999 87753
No 339
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.75 E-value=1.6e-05 Score=44.31 Aligned_cols=28 Identities=25% Similarity=0.526 Sum_probs=25.3
Q ss_pred CCceeeccccccccChHHHHHHHhhhcCCC
Q 018586 12 TARHKCVACYKQFKRKDHLIEHMKISYHSV 41 (353)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~ 41 (353)
++||.|+.|++.|...+.|..|+++ |++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--h~~ 28 (28)
T 2kvf_A 1 MRPYSCSVCGKRFSLKHQMETHYRV--HTG 28 (28)
T ss_dssp CCSEECSSSCCEESCHHHHHHHHTT--SCC
T ss_pred CcCccCCCCCcccCCHHHHHHHHHh--cCC
Confidence 4799999999999999999999998 753
No 340
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=97.73 E-value=1e-05 Score=56.66 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=21.5
Q ss_pred ccccccCchhHHHHHHHhcCCCCCCcc--cCCcchhhhh
Q 018586 84 CMNIFDSPSSLIKHKEACSLSAPVPFE--KTLSNAESQK 120 (353)
Q Consensus 84 C~k~F~~~s~L~~H~~~h~~~k~~~c~--~~~~~~~~~~ 120 (353)
|+++|...+.|..|+++|++++||+|+ .|+..+....
T Consensus 25 C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~ 63 (72)
T 2epa_A 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63 (72)
T ss_dssp TCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHH
T ss_pred CccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHH
Confidence 666666666666666666666666663 3554444333
No 341
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=97.72 E-value=1.6e-05 Score=44.54 Aligned_cols=28 Identities=29% Similarity=0.660 Sum_probs=25.6
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
+||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~ 28 (29)
T 1ard_A 1 RSFVCEVCTRAFARQEHLKRHYRS--HTNE 28 (29)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH--HSCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHH--hcCC
Confidence 589999999999999999999999 7764
No 342
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.72 E-value=1.5e-05 Score=46.93 Aligned_cols=27 Identities=30% Similarity=0.424 Sum_probs=24.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~ 106 (353)
.|+.|+++|.+.+.|..|+++|++++|
T Consensus 9 ~C~~C~k~f~~~~~L~~H~~~h~~~kp 35 (35)
T 2elx_A 9 VCALCLKKFVSSIRLRSHIREVHGAAQ 35 (35)
T ss_dssp ECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred ECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence 589999999999999999999998875
No 343
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.68 E-value=2.3e-05 Score=45.19 Aligned_cols=29 Identities=34% Similarity=0.553 Sum_probs=26.6
Q ss_pred CCceeec--cccccccChHHHHHHHhhhcCCCC
Q 018586 12 TARHKCV--ACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 12 ~k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
++||.|+ .|++.|...+.|..|+++ |+++
T Consensus 1 ek~~~C~~~~C~k~f~~~~~L~~H~~~--H~~~ 31 (32)
T 1zfd_A 1 DRPYSCDHPGCDKAFVRNHDLIRHKKS--HQEK 31 (32)
T ss_dssp CCSBCCCCTTCCCCBSSSHHHHHHHGG--GTCC
T ss_pred CCCCcCcCCCCCCccCCHHHHHHHHHH--ccCC
Confidence 4799999 899999999999999999 8875
No 344
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.66 E-value=1.9e-05 Score=47.28 Aligned_cols=27 Identities=15% Similarity=0.358 Sum_probs=24.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~ 106 (353)
.|+.|+++|...+.|..|+++|++++|
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~h~~~kp 37 (37)
T 2elo_A 11 SCPVCEKSFSEDRLIKSHIKTNHPEVS 37 (37)
T ss_dssp EETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred CCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence 589999999999999999999998875
No 345
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=97.65 E-value=2.6e-05 Score=44.59 Aligned_cols=29 Identities=31% Similarity=0.584 Sum_probs=26.1
Q ss_pred Cceeec--cccccccChHHHHHHHhhhcCCCCC
Q 018586 13 ARHKCV--ACYKQFKRKDHLIEHMKISYHSVHQ 43 (353)
Q Consensus 13 k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~~~ 43 (353)
+||.|+ .|++.|...+.|..|+++ |++++
T Consensus 1 kp~~C~~~~C~k~f~~~~~L~~H~~~--H~~~k 31 (31)
T 1sp2_A 1 RPFMCTWSYCGKRFTRSDELQRHKRT--HTGEK 31 (31)
T ss_dssp CCCBCCSTTCCCBCSSHHHHHHHHTT--TSCCC
T ss_pred CCcCCcCCCCCcccCCHhHHHHHHHH--hcCCC
Confidence 589998 999999999999999999 88753
No 346
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.65 E-value=1.8e-05 Score=44.26 Aligned_cols=28 Identities=39% Similarity=0.657 Sum_probs=25.6
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
+||.|+.|++.|.....|..|+++ |+++
T Consensus 1 ~~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 28 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNLKRHLRI--HSGE 28 (29)
T ss_dssp CCEECTTTSCEESCHHHHHHHHHH--HHTC
T ss_pred CCccCCCCCCccCChhHHHHHHHH--hcCC
Confidence 589999999999999999999998 7765
No 347
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=3.6e-05 Score=56.82 Aligned_cols=61 Identities=15% Similarity=0.094 Sum_probs=48.2
Q ss_pred CCCCCCCCccccccccccccccccCchhHHHHHHH-hcCCCC--------CCcccCCcchhhhhhhcccc
Q 018586 66 PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA-CSLSAP--------VPFEKTLSNAESQKKISGAI 126 (353)
Q Consensus 66 ~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~-h~~~k~--------~~c~~~~~~~~~~~~~~~~~ 126 (353)
.+.|...+..+....|+.|++.|...+.|..|+++ |.++++ |.|+.|+..+.....+..++
T Consensus 13 ~~~c~~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~ 82 (95)
T 2ej4_A 13 ELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82 (95)
T ss_dssp CCCCCCCCSSCSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH
T ss_pred CceeEeecCCcCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHH
Confidence 45565555555555799999999999999999998 988888 99999988777766665544
No 348
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=97.65 E-value=2.5e-06 Score=49.76 Aligned_cols=30 Identities=33% Similarity=0.523 Sum_probs=27.5
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQP 44 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~ 44 (353)
+||.|+.|++.|...+.|..|+++ |+++++
T Consensus 1 kp~~C~~C~k~f~~~~~L~~H~~~--H~~~kp 30 (32)
T 2kfq_A 1 YAFACPACPKRFMRSDALSKHIKT--AFIVVA 30 (32)
T ss_dssp CCSSSSSSCTTHHHHHTTSSSTTS--SSSSSS
T ss_pred CCCCCCCCCcccCCHHHHHHHHHH--HccCCC
Confidence 589999999999999999999999 988765
No 349
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.63 E-value=1.2e-05 Score=57.28 Aligned_cols=42 Identities=19% Similarity=0.238 Sum_probs=29.6
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhhhcCCCCCC-ccccCcc
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQK 51 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~ 51 (353)
+++|.+.+|+.|+.|++.|. .+.|..|+ . |.++++ .|..|++
T Consensus 9 ~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~--~c~~~~~~C~~C~~ 51 (75)
T 2d9k_A 9 EETECPLRLAVCQHCDLELS-ILKLKEHE-D--YCGARTELCGNCGR 51 (75)
T ss_dssp CCCCCCCCCEECSSSCCEEC-HHHHHHHH-H--HHHHCEEECSSSCC
T ss_pred CcccCCCcccCCcccChHhh-HHHHHHHH-h--HcCCCceEcccCCC
Confidence 45688888999999988884 77788888 6 555554 4444433
No 350
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.78 E-value=8e-06 Score=46.00 Aligned_cols=28 Identities=32% Similarity=0.632 Sum_probs=25.6
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
+||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--H~~~ 28 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLIAHVRQ--HTGE 28 (29)
Confidence 589999999999999999999998 8764
No 351
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.61 E-value=1.7e-05 Score=44.30 Aligned_cols=28 Identities=39% Similarity=0.750 Sum_probs=25.4
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
+||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~--h~~~ 28 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLKAHLKI--HIAD 28 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHHHHHHH--HHSC
T ss_pred CCCcCCCCCcccCCHHHHHHHHHH--hccC
Confidence 589999999999999999999998 7664
No 352
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=97.61 E-value=1.5e-06 Score=50.67 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=25.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPV 107 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~ 107 (353)
.|+.|+++|.+.+.|..|+++|++++||
T Consensus 4 ~C~~C~k~f~~~~~L~~H~~~H~~~kp~ 31 (32)
T 2kfq_A 4 ACPACPKRFMRSDALSKHIKTAFIVVAL 31 (32)
T ss_dssp SSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred CCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence 5888999999999999999999999886
No 353
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=97.61 E-value=2.6e-05 Score=43.85 Aligned_cols=29 Identities=17% Similarity=0.305 Sum_probs=25.8
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSVHQ 43 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~~ 43 (353)
+||.|+.|++.|...+.|..|+++ |.+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~--h~~~~ 29 (30)
T 1klr_A 1 KTYQCQYCEFRSADSSNLKTHIKT--KHSKE 29 (30)
T ss_dssp CCCCCSSSSCCCSCSHHHHHHHHH--HTSSC
T ss_pred CCccCCCCCCccCCHHHHHHHHHH--HccCC
Confidence 589999999999999999999998 76654
No 354
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.61 E-value=2.6e-05 Score=44.04 Aligned_cols=28 Identities=43% Similarity=0.714 Sum_probs=25.1
Q ss_pred CceeeccccccccChHHHHHH-HhhhcCCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEH-MKISYHSVH 42 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H-~~~~~h~~~ 42 (353)
+||.|+.|++.|...+.|..| +++ |+++
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~~--H~~~ 29 (30)
T 1paa_A 1 KAYACGLCNRAFTRRDLLIRHAQKI--HSGN 29 (30)
T ss_dssp CCSBCTTTCCBCSSSHHHHHHHTTT--SCCC
T ss_pred CCcCCcccCcccCChHHHHHHHHHH--ccCC
Confidence 589999999999999999999 678 8765
No 355
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=97.60 E-value=3.2e-05 Score=43.48 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=24.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~ 106 (353)
.|+.|++.|...+.|..|+++|+++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~h~~~~~ 30 (30)
T 1klr_A 4 QCQYCEFRSADSSNLKTHIKTKHSKEK 30 (30)
T ss_dssp CCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred cCCCCCCccCCHHHHHHHHHHHccCCC
Confidence 588999999999999999999998764
No 356
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=97.60 E-value=3.3e-05 Score=43.18 Aligned_cols=26 Identities=19% Similarity=0.445 Sum_probs=23.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|+++|...+.|..|+++|++++
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~~h~~~k 29 (29)
T 1ard_A 4 VCEVCTRAFARQEHLKRHYRSHTNEK 29 (29)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHhcCCC
Confidence 58999999999999999999998764
No 357
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=96.75 E-value=9.1e-06 Score=46.01 Aligned_cols=29 Identities=28% Similarity=0.571 Sum_probs=26.1
Q ss_pred CCceeeccccccccChHHHHHHHhhhcCCCC
Q 018586 12 TARHKCVACYKQFKRKDHLIEHMKISYHSVH 42 (353)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~ 42 (353)
++||.|+.|++.|...+.|..|+++ |+++
T Consensus 1 ~k~~~C~~C~k~f~~~~~l~~H~~~--h~~~ 29 (30)
T 2lvr_A 1 MKPYVCIHCQRQFADPGALQRHVRI--HTGE 29 (30)
Confidence 4789999999999999999999998 7764
No 358
>2d5r_A CCR4-NOT transcription complex subunit 7; poly(A) deadenylase, antiproliferative protein, transcription; 2.50A {Homo sapiens} SCOP: c.55.3.9
Probab=97.59 E-value=0.00059 Score=59.96 Aligned_cols=157 Identities=13% Similarity=0.131 Sum_probs=98.4
Q ss_pred CceeeccCccccccCC-----------------------CCccceeEEeeecCCCCe-----E--EeeeccCCCC-cccc
Q 018586 135 PKAVAMDCEMVGGGSN-----------------------GTLDLCARVCLVDEDENV-----I--FHTYVQPQLP-VTNY 183 (353)
Q Consensus 135 ~~~~~~D~Ettg~~~~-----------------------~~~~il~~v~ivd~~g~~-----~--~~~lv~P~~~-i~~~ 183 (353)
.+||++|+|++|+... .++++ .+++.+.+|+. . |+-....... ..+.
T Consensus 24 ~~fvAmDtEFpGvv~rp~g~f~~~~~~~Y~~lr~nVd~l~iIQl--Glt~~~~~g~~p~~~~~wqFNF~F~~~~d~~~~~ 101 (252)
T 2d5r_A 24 YNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQL--GLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQD 101 (252)
T ss_dssp CCEEEEEEECCCCCCCCCSCCSSHHHHHHHHHHHHHTTCCCCEE--EEEEECTTSCCCSSCCEEEEEBCCCTTTSCCCHH
T ss_pred CCEEEEEeeecceecccCCCCCCCHHHHHHHHHHhhhhcceeEE--EEEEEccCCCCCCCceeEEEEEEECCcccccCHH
Confidence 4699999999996411 11122 45666777764 2 3333222221 1111
Q ss_pred cc---ccCCCCHhh-hcCCCChHHHHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhc-----Cc--------
Q 018586 184 RY---EVTGLTEED-IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-----MN-------- 246 (353)
Q Consensus 184 ~~---~~~GIt~e~-l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-----~~-------- 246 (353)
.. .-+||.=+. ...+.+..+..+.+.. ++ +. -+++..+|.++..+|+.+|- ..
T Consensus 102 Si~fL~~~G~DF~k~~~~GI~~~~F~ell~~---sg---lv----l~~~v~Witfhg~yDf~yL~k~L~~~~LP~~~~~F 171 (252)
T 2d5r_A 102 SIELLTTSGIQFKKHEEEGIETQYFAELLMT---SG---VV----LCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDF 171 (252)
T ss_dssp HHHHHHHHTCCHHHHHHHCBCHHHHHHHHHT---TT---SS----SSSSCEEEESSCHHHHHHHHHHHHTSCCCSSHHHH
T ss_pred HHHHHHHcCCChhHHHhcCCCHHHHHHHHHh---cC---cc----cCCCceEEEecCcchHHHHHHHhcCCCCCCCHHHH
Confidence 11 125776443 3456666543333322 11 00 12457899999999999876 12
Q ss_pred -------CCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhch
Q 018586 247 -------YPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 308 (353)
Q Consensus 247 -------~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~ 308 (353)
+| .+.|+..+++.... ..-+|+.|++.+ |+.--+..|.|-.|+..|+.+|.++++..
T Consensus 172 ~~~l~~~FP--~iyD~K~l~~~~~~--l~~gL~~la~~L-~v~r~g~~HqAGsDsllT~~~F~km~~~~ 235 (252)
T 2d5r_A 172 FEILRLFFP--VIYDVKYLMKSCKN--LKGGLQEVAEQL-ELERIGPQHQAGSDSLLTGMAFFKMREMF 235 (252)
T ss_dssp HHHHHHHCS--CEEEHHHHGGGCTT--CCSSHHHHHHHH-TCCCCSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCc--chhhHHHHHHHhcc--cCCCHHHHHHHc-CCCccCcccchhhhHHHHHHHHHHHHHHh
Confidence 44 37898888877642 246799999998 88854558999999999999999998775
No 359
>2e6m_A Werner syndrome ATP-dependent helicase homolog; APO form, hydrolase; 2.00A {Mus musculus} PDB: 2e6l_A 2fby_A 2fbv_A 2fbx_A 2fbt_A 2fc0_A*
Probab=97.56 E-value=0.00037 Score=59.70 Aligned_cols=92 Identities=17% Similarity=0.168 Sum_probs=64.5
Q ss_pred HHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhcC--cCCCCceee-cccccCCcccCCCCCcHHHHHHHHhCCc
Q 018586 206 DKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRM--NYPDHMLRD-TAKYRPLMKTNLVSHSLKYLTRTYLGYD 282 (353)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~--~~~~~~~~D-t~~l~~~~~~~~~~~~L~~l~~~~~~~~ 282 (353)
+.+.+++ .+.+.+.||||+.+|+..|.. +.....++| |+..+..+.+ ..+++|+.|++.++|..
T Consensus 86 ~~L~~lL------------~d~~i~Kv~~~~k~D~~~L~~~~gi~~~~~fDlt~lAayll~~-~~~~~L~~L~~~~l~~~ 152 (208)
T 2e6m_A 86 QGLKMLL------------ENKSIKKAGVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKC-AETWSLNGLVKHVLGKQ 152 (208)
T ss_dssp HHHHHHH------------TCTTSEEEESSHHHHHHHHHHHHCCCCCSEEEHHHHHHHHTTC-CCCCCHHHHHHHHHSCB
T ss_pred HHHHHHh------------cCCCceEEEEeeHHHHHHHHHHCCCCCCCEEEHHHHHHHHccC-CCChhHHHHHHHHcCCC
Confidence 3577778 234568899999999999963 333333899 5444333333 56899999999998877
Q ss_pred CCCC-----------------CCChHHHHHHHHHHHHHHHhchhh
Q 018586 283 IQSG-----------------VHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 283 ~~~~-----------------~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
+..+ ..-|..||.++..|+..+..+..+
T Consensus 153 ~~K~k~~~~s~W~~~~L~~~q~~YAa~Da~~~~~L~~~L~~~L~~ 197 (208)
T 2e6m_A 153 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKLGNLGDT 197 (208)
T ss_dssp CCCCHHHHTSCTTSSSCCHHHHHHHHHHHHHHHHHHHHHHTCC--
T ss_pred cCCCCCeeeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 5221 112568999999999999988765
No 360
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.56 E-value=3.8e-05 Score=42.16 Aligned_cols=26 Identities=31% Similarity=0.581 Sum_probs=23.4
Q ss_pred ceeeccccccccChHHHHHHHhhhcCCC
Q 018586 14 RHKCVACYKQFKRKDHLIEHMKISYHSV 41 (353)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~~~~h~~ 41 (353)
||.|+.|++.|...+.|..|+++ |++
T Consensus 1 ~~~C~~C~k~f~~~~~l~~H~~~--h~~ 26 (27)
T 1znf_A 1 XYKCGLCERSFVEKSALSRHQRV--HKN 26 (27)
T ss_dssp -CBCSSSCCBCSSHHHHHHHGGG--TCC
T ss_pred CccCCCCCCcCCCHHHHHHHHHH--cCC
Confidence 68999999999999999999998 775
No 361
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=97.54 E-value=2.6e-05 Score=45.98 Aligned_cols=27 Identities=15% Similarity=0.471 Sum_probs=24.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~ 106 (353)
.|+.|++.|...+.|..|+++|++++|
T Consensus 9 ~C~~C~k~f~~~~~l~~H~~~H~~~~~ 35 (35)
T 1srk_A 9 VCRICLSAFTTKANCARHLKVHTDTLS 35 (35)
T ss_dssp ECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred eCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence 588999999999999999999998875
No 362
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.54 E-value=3.2e-05 Score=43.16 Aligned_cols=26 Identities=23% Similarity=0.378 Sum_probs=23.7
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|+++|...+.|..|+++|++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2m0f_A 4 KCRECGKQFTTSGNLKRHLRIHSGEK 29 (29)
T ss_dssp ECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred cCCCCCCccCChhHHHHHHHHhcCCC
Confidence 58999999999999999999998864
No 363
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=97.53 E-value=4.4e-06 Score=57.02 Aligned_cols=25 Identities=20% Similarity=0.369 Sum_probs=13.3
Q ss_pred HHhhhcCCCCCC-ccccCcccCCChHHH
Q 018586 33 HMKISYHSVHQP-KCAVCQKLSKSFESL 59 (353)
Q Consensus 33 H~~~~~h~~~~~-~C~~C~~~f~~~~~l 59 (353)
|+++ |+++++ .|..|++.|.....|
T Consensus 5 h~~~--H~~~k~~~C~~C~k~F~~~~~l 30 (62)
T 1vd4_A 5 DERD--STNRASFKCPVCSSTFTDLEAN 30 (62)
T ss_dssp CSSS--CCSSSEEECSSSCCEEEHHHHH
T ss_pred HHHH--cCCCCCccCCCCCchhccHHHh
Confidence 4444 555555 555555555554444
No 364
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.53 E-value=3.7e-05 Score=46.30 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=26.2
Q ss_pred ccc--cccccccCchhHHHHHHHhcCCCCCC
Q 018586 80 GCN--LCMNIFDSPSSLIKHKEACSLSAPVP 108 (353)
Q Consensus 80 ~C~--~C~k~F~~~s~L~~H~~~h~~~k~~~ 108 (353)
.|+ .|+++|.+.+.|..|+++|++++||.
T Consensus 8 ~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~ 38 (38)
T 1bhi_A 8 LCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 38 (38)
T ss_dssp ECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred ECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence 577 59999999999999999999999874
No 365
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.53 E-value=3.6e-05 Score=42.86 Aligned_cols=26 Identities=19% Similarity=0.337 Sum_probs=23.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|+++|.+.+.|..|+++|++++
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~~h~~~~ 29 (29)
T 2m0e_A 4 KCPHCDKKFNQVGNLKAHLKIHIADG 29 (29)
T ss_dssp CCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred cCCCCCcccCCHHHHHHHHHHhccCC
Confidence 58899999999999999999998764
No 366
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.53 E-value=1.5e-05 Score=54.86 Aligned_cols=45 Identities=16% Similarity=0.321 Sum_probs=37.8
Q ss_pred cccccccccccCchhHHHHHHHhcCCCCCCcc-cCCcchhhhhhhccc
Q 018586 79 RGCNLCMNIFDSPSSLIKHKEACSLSAPVPFE-KTLSNAESQKKISGA 125 (353)
Q Consensus 79 ~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~-~~~~~~~~~~~~~~~ 125 (353)
..|+.|+++|. .+.|..|+++ ++++||+|+ .|+..+...+.+..+
T Consensus 11 ~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H 56 (66)
T 2eod_A 11 QPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGH 56 (66)
T ss_dssp EECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHH
T ss_pred eeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHH
Confidence 36999999999 9999999999 999999999 998776655555444
No 367
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.53 E-value=2.6e-05 Score=43.63 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=23.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|++.|...+.|..|+++|++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 1rik_A 4 ACPECPKRFMRSDHLTLHILLHENKK 29 (29)
T ss_dssp ECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred cCCCCCchhCCHHHHHHHHHHhcCCC
Confidence 58999999999999999999998764
No 368
>2p51_A SPCC18.06C protein; DEDD nuclease fold, hydrolase, gene regulation; 1.40A {Schizosaccharomyces pombe} PDB: 3g0z_A 3g10_A
Probab=97.48 E-value=0.00092 Score=60.68 Aligned_cols=159 Identities=14% Similarity=0.134 Sum_probs=100.8
Q ss_pred CCCceeeccCccccccCCC-----------------------CccceeEEeeecCCCCe-----E--EeeeccCCC-Ccc
Q 018586 133 RGPKAVAMDCEMVGGGSNG-----------------------TLDLCARVCLVDEDENV-----I--FHTYVQPQL-PVT 181 (353)
Q Consensus 133 ~~~~~~~~D~Ettg~~~~~-----------------------~~~il~~v~ivd~~g~~-----~--~~~lv~P~~-~i~ 181 (353)
...+||++|+|++|+.... ++++ .+++.|.+|+. . |+-...... ...
T Consensus 43 ~~~~fVAmDtEFpGvv~rp~g~f~~~~e~~Yq~lR~NVd~l~iIQl--GLt~fd~~G~~p~~~~twqFNF~F~~~~d~~~ 120 (333)
T 2p51_A 43 ERYPVVSMDTEFPGVVARPLGVFKSSDDYHYQTLRANVDSLKIIQI--GLALSDEEGNAPVEACTWQFNFTFNLQDDMYA 120 (333)
T ss_dssp TTSCEEEEEEECCCCCCCCCSCCSSSHHHHHHHHHHHHHHSCCCEE--EEEEECTTSCCCTTCSEEEEEBCCCTTTSCCC
T ss_pred hhCCEEEEeeeccccccccccccCCCHHHHHHHHHHhhhhccceEE--EEEEEccCCCCCCCceeEEEEEEECCcccccC
Confidence 3457999999999964211 1112 45666777764 2 344433322 111
Q ss_pred cccc---ccCCCCHhh-hcCCCChHHHHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhc-----Cc------
Q 018586 182 NYRY---EVTGLTEED-IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-----MN------ 246 (353)
Q Consensus 182 ~~~~---~~~GIt~e~-l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-----~~------ 246 (353)
+... .-+||.=+. ..++.+..+..+.+.. ++ +. -.++..+|.++..+|+.+|- ..
T Consensus 121 ~~SI~fL~~~G~DF~k~~~~GI~~~~F~elL~~---SG---Lv----l~~~V~Witfhg~YDfgyLlK~Lt~~~LP~~~~ 190 (333)
T 2p51_A 121 PESIELLTKSGIDFKKHQEVGIEPADFAELLIG---SG---LV----LQEEVTWITFHSGYDFAYLLKAMTQIPLPAEYE 190 (333)
T ss_dssp HHHHHHHHHTTCCHHHHHHHCBCHHHHHHHHHT---TT---SS----SCTTCEEEESSCHHHHHHHHHHHHCSCCCSSHH
T ss_pred HHHHHHHHHcCCChhHHHHcCCCHHHHHHHHHh---cC---cc----cCCCceEEEeccchhHHHHHHHhcCCCCCCCHH
Confidence 1111 126887444 4466666654433332 11 01 12456889999999999875 11
Q ss_pred ---------CCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhch
Q 018586 247 ---------YPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 308 (353)
Q Consensus 247 ---------~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~ 308 (353)
+|. +.|+..+++.... ..-+|+.+++.+ |+.-.+..|.|-.|+..|+.+|.++++..
T Consensus 191 eF~~~l~~~FP~--iYD~K~l~~~~~~--l~ggL~~lA~~L-~v~Rig~~HqAGsDSlLT~~~F~kl~~~~ 256 (333)
T 2p51_A 191 EFYKILCIYFPK--NYDIKYIMKSVLN--NSKGLQDIADDL-QIHRIGPQHQAGSDALLTARIFFEIRSRY 256 (333)
T ss_dssp HHHHHHHHHSSS--EEEHHHHHTTTTC--CCCCHHHHHHHT-TCCCCSCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCcc--hhhHHHHHHHhcc--ccCCHHHHHHHc-CCCccCcchhhhhHHHHHHHHHHHHHHHh
Confidence 443 7898888877642 246899999998 88855559999999999999999999875
No 369
>1noy_A Protein (DNA polymerase (E.C.2.7.7.7)); exonuclease, DNA-binding, complex (nucleotidyltransferase/DNA); HET: DNA; 2.20A {Enterobacteria phage T4} SCOP: c.55.3.5 PDB: 1noz_A*
Probab=97.48 E-value=0.00068 Score=63.87 Aligned_cols=159 Identities=14% Similarity=0.135 Sum_probs=93.8
Q ss_pred cCCCceeeccCcccccc-CCC---CccceeEEeeecCCCCe--EEeeeccC-CCCcccccc------ccCCCC---Hh--
Q 018586 132 CRGPKAVAMDCEMVGGG-SNG---TLDLCARVCLVDEDENV--IFHTYVQP-QLPVTNYRY------EVTGLT---EE-- 193 (353)
Q Consensus 132 ~~~~~~~~~D~Ettg~~-~~~---~~~il~~v~ivd~~g~~--~~~~lv~P-~~~i~~~~~------~~~GIt---~e-- 193 (353)
.+..+++++|+|+++.+ ++. ..++ ..+++++..+.. +|. ++++ .....++.. .+..++ +.
T Consensus 103 ~p~l~vlsfDIEt~~~~fP~~~~~~d~I-i~Is~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 180 (388)
T 1noy_A 103 RKFVRVANCDIEVTGDKFPDPMKAEYEI-DAITHYDSIDDRFYVFD-LLNSMYGSVSKWDAKLAAKLDCEGGDEVPQEIL 180 (388)
T ss_dssp GGGCCEEEEEEEECCSSCCCTTTCCSCE-EEEEEEETTTTEEEEEE-ECCCSSCCCCCCCHHHHHSCGGGTCCCCCHHHH
T ss_pred CCCeEEEEEEEEeCCCCCCCCCCCCCeE-EEEEEEEecCCeEEEEE-EeeccCCCCCccccccccccccccccccccccC
Confidence 45678999999999821 221 1233 456666565553 232 2433 222111100 011111 11
Q ss_pred -h--hcCCCChHHHHHHHHHHHhcCCCCcccccCCCCCcEEEeccc-HHHHHHhc----C--c---------CCC-----
Q 018586 194 -D--IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR----M--N---------YPD----- 249 (353)
Q Consensus 194 -~--l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~----~--~---------~~~----- 249 (353)
. +....+..+++..|.+++...+ ..+|||||+ .||+.+|. . + .++
T Consensus 181 ~~v~v~~~~~E~~LL~~f~~~i~~~d-----------PDii~GyN~~~FDlpyL~~Ra~~~lg~~l~~~~s~~~r~~~~~ 249 (388)
T 1noy_A 181 DRVIYMPFDNERDMLMEYINLWEQKR-----------PAIFTGWNIEGFDVPYIMNRVKMILGERSMKRFSPIGRVKSKL 249 (388)
T ss_dssp TTEEEEEESCHHHHHHHHHHHHHHSC-----------CSEEECSSTTTTHHHHHHHHHHHHHHHHHHGGGSTTSCEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHHhC-----------CcEEEecCCCCccHHHHHHHHHHHcCCccccccCccccccccc
Confidence 1 2345678899999999996553 369999997 67998865 1 1 110
Q ss_pred ---------------CceeecccccCCc-ccCCCCCcHHHHHHHHhCCcCCCCCCC----------------hHHHHHHH
Q 018586 250 ---------------HMLRDTAKYRPLM-KTNLVSHSLKYLTRTYLGYDIQSGVHD----------------PYEDCVSV 297 (353)
Q Consensus 250 ---------------~~~~Dt~~l~~~~-~~~~~~~~L~~l~~~~~~~~~~~~~H~----------------Al~Da~~t 297 (353)
..++|+..+.+.+ +....+|+|+.+++.+||.. ....+. .+.||..|
T Consensus 250 ~~~~~g~~~~~~i~GR~~lD~~~~~k~~~~~~l~sysL~~Va~~~Lg~~-K~d~~~~i~~~~~~~~~~l~~Y~~~D~~l~ 328 (388)
T 1noy_A 250 LQNMYGSKEIYSIDGVSILDYLDLYKKFAFTNLPSFSLESVAQHETKKG-KLPYDGPINKLRETNHQRYISYNIIDVESV 328 (388)
T ss_dssp CCGGGCSCEEEEETTSEECCHHHHHHHHTCCCCSCCSHHHHHHHHHSCC-CCCCSSCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhCCcceEEEcCeEEeEHHHHHhhcCcCcccCCCHHHHHHHHhCCC-CCCcHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 1145666555553 22267899999999888876 332212 36799999
Q ss_pred HHHHHHH
Q 018586 298 MRLYKRF 304 (353)
Q Consensus 298 ~~l~~~~ 304 (353)
++|+.++
T Consensus 329 ~~L~~kl 335 (388)
T 1noy_A 329 QAIDKIR 335 (388)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999884
No 370
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.48 E-value=4e-05 Score=43.04 Aligned_cols=26 Identities=27% Similarity=0.612 Sum_probs=23.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|+++|...+.|..|+++|++++
T Consensus 5 ~C~~C~~~f~~~~~l~~H~~~h~~~k 30 (30)
T 2m0d_A 5 QCDYCGRSFSDPTSKMRHLETHDTDK 30 (30)
T ss_dssp ECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred cCCCCCcccCCHHHHHHHHHHhccCC
Confidence 58999999999999999999998764
No 371
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.60 E-value=1.7e-05 Score=43.41 Aligned_cols=24 Identities=25% Similarity=0.524 Sum_probs=22.6
Q ss_pred CceeeccccccccChHHHHHHHhh
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKI 36 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~ 36 (353)
+||.|+.|++.|...+.|..|+++
T Consensus 1 kp~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 589999999999999999999987
No 372
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.47 E-value=6.6e-05 Score=45.76 Aligned_cols=25 Identities=16% Similarity=0.169 Sum_probs=22.4
Q ss_pred cccc--ccccccCchhHHHHHHHhcCC
Q 018586 80 GCNL--CMNIFDSPSSLIKHKEACSLS 104 (353)
Q Consensus 80 ~C~~--C~k~F~~~s~L~~H~~~h~~~ 104 (353)
.|+. |+++|.+.+.|..|+++|+++
T Consensus 11 ~C~~~~C~k~F~~~~~L~~H~r~Htg~ 37 (38)
T 2eln_A 11 KCPTDGCDYSTPDKYKLQAHLKVHTAL 37 (38)
T ss_dssp ECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred CCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence 5765 999999999999999999875
No 373
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.46 E-value=5.8e-05 Score=44.67 Aligned_cols=26 Identities=27% Similarity=0.475 Sum_probs=23.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|++.|...+.|..|+++|++++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~ek 36 (36)
T 2elr_A 11 LCDMCGKKFKSKGTLKSHKLLHTADG 36 (36)
T ss_dssp BCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred ecCcCCCCcCchHHHHHHHHHhcCCC
Confidence 58899999999999999999998864
No 374
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.58 E-value=1.8e-05 Score=44.40 Aligned_cols=26 Identities=31% Similarity=0.497 Sum_probs=23.5
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|+++|...+.|..|+++|++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~~~k 29 (29)
T 2lvt_A 4 QCVMCGKAFTQASSLIAHVRQHTGEK 29 (29)
Confidence 58999999999999999999998764
No 375
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.44 E-value=3.7e-06 Score=59.99 Aligned_cols=62 Identities=19% Similarity=0.233 Sum_probs=46.9
Q ss_pred HHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhcc----CCCCCCCCCCccccccccccccccccCchhHHHHHHHhcC
Q 018586 29 HLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHL----TGPLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSL 103 (353)
Q Consensus 29 ~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~----~~~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~ 103 (353)
.|..|+++ |.++++ .|..|++.|. .+.|..|+ ..++ .|+.|++.|. ...|..|+++|.+
T Consensus 4 ~L~~H~~~--~c~~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~------------~C~~C~~~~~-~~~l~~H~~~c~~ 67 (75)
T 2d9k_A 4 GSSGHEET--ECPLRLAVCQHCDLELS-ILKLKEHEDYCGARTE------------LCGNCGRNVL-VKDLKTHPEVCGR 67 (75)
T ss_dssp CCSCCCCC--CCCCCCEECSSSCCEEC-HHHHHHHHHHHHHCEE------------ECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred HHHhhCcc--cCCCcccCCcccChHhh-HHHHHHHHhHcCCCce------------EcccCCCcCc-HHHHHHHHHHccC
Confidence 45667777 888888 9999999984 88888887 2222 4677888776 4788999999887
Q ss_pred CCC
Q 018586 104 SAP 106 (353)
Q Consensus 104 ~k~ 106 (353)
++.
T Consensus 68 ~~~ 70 (75)
T 2d9k_A 68 EGS 70 (75)
T ss_dssp BSS
T ss_pred CcC
Confidence 643
No 376
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.42 E-value=6.6e-05 Score=44.52 Aligned_cols=26 Identities=23% Similarity=0.422 Sum_probs=23.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|++.|...+.|..|+++|++++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2els_A 11 TCEYCNKVFKFKHSLQAHLRIHTNEK 36 (36)
T ss_dssp ECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred ECCCCCceeCCHHHHHHHHHHhCCCC
Confidence 58999999999999999999998764
No 377
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.41 E-value=3.5e-05 Score=42.31 Aligned_cols=25 Identities=28% Similarity=0.522 Sum_probs=21.9
Q ss_pred ccccccccccCchhHHHHHHHhcCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLS 104 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~ 104 (353)
.|+.|++.|.+.+.|..|+++|+++
T Consensus 3 ~C~~C~k~f~~~~~l~~H~~~h~~~ 27 (27)
T 1znf_A 3 KCGLCERSFVEKSALSRHQRVHKNX 27 (27)
T ss_dssp BCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred cCCCCCCcCCCHHHHHHHHHHcCCC
Confidence 5889999999999999999999763
No 378
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.38 E-value=7.8e-05 Score=44.08 Aligned_cols=26 Identities=15% Similarity=0.147 Sum_probs=23.4
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|++.|...+.|..|+++|++++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elt_A 11 KCPQCSYASAIKANLNVHLRKHTGEK 36 (36)
T ss_dssp ECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred CCCCCCcccCCHHHHHHHHHHccCCC
Confidence 58899999999999999999998764
No 379
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=97.36 E-value=5.8e-05 Score=43.09 Aligned_cols=26 Identities=23% Similarity=0.429 Sum_probs=23.0
Q ss_pred ccc--cccccccCchhHHHHHHHhcCCC
Q 018586 80 GCN--LCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~--~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+ .||++|...+.|..|+++|++++
T Consensus 4 ~C~~~~C~k~f~~~~~L~~H~~~H~~~k 31 (31)
T 1sp2_A 4 MCTWSYCGKRFTRSDELQRHKRTHTGEK 31 (31)
T ss_dssp BCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred CCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence 465 89999999999999999998864
No 380
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=96.44 E-value=3.1e-05 Score=43.69 Aligned_cols=26 Identities=23% Similarity=0.424 Sum_probs=23.3
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|+++|.+.+.|..|+++|++++
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~~h~~~k 30 (30)
T 2lvr_A 5 VCIHCQRQFADPGALQRHVRIHTGEK 30 (30)
Confidence 58999999999999999999998764
No 381
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.32 E-value=9.5e-05 Score=43.78 Aligned_cols=26 Identities=31% Similarity=0.393 Sum_probs=23.2
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|++.|...+.|..|+++|++++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elq_A 11 KCSLCEYATRSKSNLKAHMNRHSTEK 36 (36)
T ss_dssp ECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred cCCCCCchhCCHHHHHHHHHHhccCC
Confidence 58899999999999999999998764
No 382
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=97.31 E-value=0.00014 Score=40.42 Aligned_cols=27 Identities=30% Similarity=0.508 Sum_probs=24.5
Q ss_pred Cceeec--cccccccChHHHHHHHhhhcCCC
Q 018586 13 ARHKCV--ACYKQFKRKDHLIEHMKISYHSV 41 (353)
Q Consensus 13 k~~~C~--~C~k~f~~~~~l~~H~~~~~h~~ 41 (353)
+||.|+ .|++.|...+.|..|+++ |++
T Consensus 1 k~~~C~~~~C~k~f~~~~~l~~H~~~--H~~ 29 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKLNRHKKI--HTG 29 (29)
T ss_dssp CCEEECSTTTCEEESSHHHHHHHHGG--GTC
T ss_pred CCCCCcCCcCcCccCCHHHHHHHHHH--hCC
Confidence 589999 999999999999999998 753
No 383
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.30 E-value=9.4e-05 Score=44.12 Aligned_cols=26 Identities=27% Similarity=0.258 Sum_probs=23.3
Q ss_pred ccccccccccCc-hhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSP-SSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~-s~L~~H~~~h~~~k 105 (353)
.|+.|++.|... +.|..|+++|++++
T Consensus 11 ~C~~C~k~f~~~~~~L~~H~~~H~~~k 37 (37)
T 2elp_A 11 KCPYCDFYFMKNGSDLQRHIWAHEGVK 37 (37)
T ss_dssp ECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred ECCCCChhhccCHHHHHHHHHhcCCCC
Confidence 588999999999 99999999998764
No 384
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=97.30 E-value=6.9e-05 Score=45.06 Aligned_cols=24 Identities=33% Similarity=0.445 Sum_probs=19.1
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFE 110 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~ 110 (353)
.|+.|||+|.+.++|..|+ ||.|.
T Consensus 10 ~C~~CgK~F~~~s~L~~H~-------py~C~ 33 (36)
T 1fv5_A 10 MCLPCGIAFSSPSTLEAHQ-------AYYCS 33 (36)
T ss_dssp EETTTTEECSCHHHHHHHH-------HHTST
T ss_pred ECCCCCCccCCHhHccCcC-------CeECc
Confidence 5888888888888888887 66665
No 385
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.30 E-value=6.4e-05 Score=44.59 Aligned_cols=26 Identities=15% Similarity=0.256 Sum_probs=22.8
Q ss_pred ccccccccccCchhHHHHHHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+.|++.|...+.|..|+++|++++
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~~H~~~k 36 (36)
T 2elv_A 11 DCHICERKFKNELDRDRHMLVHGDKW 36 (36)
T ss_dssp ECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred ECCCCCCccCCHHHHHHHHHHhcCCC
Confidence 58889999999999999999998764
No 386
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.29 E-value=9.5e-05 Score=42.44 Aligned_cols=26 Identities=31% Similarity=0.543 Sum_probs=23.2
Q ss_pred ccc--cccccccCchhHHHHHHHhcCCC
Q 018586 80 GCN--LCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~--~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+ .|+++|...+.|..|+++|++++
T Consensus 5 ~C~~~~C~k~f~~~~~L~~H~~~H~~~~ 32 (32)
T 1zfd_A 5 SCDHPGCDKAFVRNHDLIRHKKSHQEKA 32 (32)
T ss_dssp CCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred cCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence 477 89999999999999999998764
No 387
>1qht_A Protein (DNA polymerase); archaea, hyperthermostable, family B polymer alpha family polymerase, transferase; 2.10A {Thermococcus SP} SCOP: c.55.3.5 e.8.1.1 PDB: 1tgo_A 2xhb_A* 2vwj_A* 2vwk_A* 1wns_A* 1wn7_A 1qqc_A* 4ahc_A* 4ail_C* 3a2f_A* 2jgu_A* 1d5a_A
Probab=97.27 E-value=0.001 Score=68.28 Aligned_cols=146 Identities=14% Similarity=0.127 Sum_probs=91.7
Q ss_pred CCCceeeccCcccccc-CC-CCccceeEEeeecCCCCeEEeeeccCCCCccccccccCCCCHhhhcCCCChHHHHHHHHH
Q 018586 133 RGPKAVAMDCEMVGGG-SN-GTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILE 210 (353)
Q Consensus 133 ~~~~~~~~D~Ettg~~-~~-~~~~il~~v~ivd~~g~~~~~~lv~P~~~i~~~~~~~~GIt~e~l~~~~~~~~v~~~~~~ 210 (353)
+..+++++|+|++|.. ++ ....+ ..++.++..+..++. . ..|..+.+...++..+++..|.+
T Consensus 133 ~~l~ilsfDIEt~~~~~p~~~~d~I-i~Is~~~~~~~~~~t--~-------------~~i~~~~v~~~~~E~~LL~~f~~ 196 (775)
T 1qht_A 133 EELTMLAFAIATLYHEGEEFGTGPI-LMISYADGSEARVIT--W-------------KKIDLPYVDVVSTEKEMIKRFLR 196 (775)
T ss_dssp CCCCEEEEEEEECCCTTCCTTCSCE-EEEEEECSSCEEEEE--S-------------SCCCCSSEEECSCHHHHHHHHHH
T ss_pred CCcEEEEEEEEEcCCCCCCCCCCcE-EEEEEEecCCCeeEe--e-------------ccccccceEEcCCHHHHHHHHHH
Confidence 4678999999999832 12 12233 355555554443221 0 11222345667888899999999
Q ss_pred HHhcCCCCcccccCCCCCcEEEeccc-HHHHHHhc-----CcCC------------------------CCceeecccccC
Q 018586 211 ILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-----MNYP------------------------DHMLRDTAKYRP 260 (353)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-----~~~~------------------------~~~~~Dt~~l~~ 260 (353)
++...++ .+|||||. .||+.+|. ++.+ ....+|+..+.+
T Consensus 197 ~i~~~dP-----------DiivGyN~~~FDlpyL~~Ra~~~gi~~~lgR~~~~~~~~~~g~~~~~~i~Gr~~lDl~~~~k 265 (775)
T 1qht_A 197 VVREKDP-----------DVLITYNGDNFDFAYLKKRCEELGIKFTLGRDGSEPKIQRMGDRFAVEVKGRIHFDLYPVIR 265 (775)
T ss_dssp HHHHHCC-----------SEEEESSTTTTHHHHHHHHHHHTTCCCCCSTTSCCCEEEEETTEEEEECTTSEEEEHHHHHH
T ss_pred HHHhcCC-----------CEEEEeCCCCccHHHHHHHHHHcCCCcccccCCCcCceeecCceeeEEecCeEEEEHHHHHH
Confidence 9955432 49999995 67999887 1111 123456666554
Q ss_pred CcccCCCCCcHHHHHHHHhCCcCCCCC------------------CChHHHHHHHHHHHHHHHh
Q 018586 261 LMKTNLVSHSLKYLTRTYLGYDIQSGV------------------HDPYEDCVSVMRLYKRFRR 306 (353)
Q Consensus 261 ~~~~~~~~~~L~~l~~~~~~~~~~~~~------------------H~Al~Da~~t~~l~~~~~~ 306 (353)
.. ....+|+|+.+++.+||..-..-. .-.+.||..|..|+..+..
T Consensus 266 ~~-~~l~sysL~~Va~~~Lg~~K~dv~~~~i~~~~~~~~~l~~l~~Y~~~Da~lt~~L~~~~~~ 328 (775)
T 1qht_A 266 RT-INLPTYTLEAVYEAVFGKPKEKVYAEEIAQAWESGEGLERVARYSMEDAKVTYELGREFFP 328 (775)
T ss_dssp HH-SCCSCCCHHHHHHHHHCCCCCCCCHHHHHHHHTTTCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh-cCcCcCCHHHHHHHHhCCCCCccCHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 43 245689999999988898632211 1125699999999876553
No 388
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.25 E-value=3.3e-05 Score=56.81 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=31.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccCCc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLS 114 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~ 114 (353)
.|+.|++.|...+.|..|+++|++++||.|..+..
T Consensus 27 ~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~ 61 (88)
T 1x6f_A 27 QCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER 61 (88)
T ss_dssp ECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred cCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence 58899999999999999999999999999988743
No 389
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=97.23 E-value=0.00014 Score=43.23 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=20.2
Q ss_pred ccccccccccCchhHHHHHHHhcCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLS 104 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~ 104 (353)
.|+.|++.|...+.|..|+++|+++
T Consensus 13 ~C~~C~k~f~~~~~l~~H~~~H~~~ 37 (37)
T 1p7a_A 13 QCPDCDRSFSRSDHLALHRKRHMLV 37 (37)
T ss_dssp CCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred cCCCCCcccCcHHHHHHHHHHhccC
Confidence 4778888888888888888888764
No 390
>1uoc_A POP2; hydrolase, DEDD nuclease, mRNA degradation, poly(A) tail, transcription regulation, repressor, phosphorylation.; 2.3A {Saccharomyces cerevisiae} SCOP: c.55.3.9
Probab=97.23 E-value=0.00099 Score=59.59 Aligned_cols=79 Identities=13% Similarity=0.062 Sum_probs=59.9
Q ss_pred CCcEEEecccHHHHHHhc-----Cc---------------CCCCceeecccccCCcccC-------------CCCCcHHH
Q 018586 227 KARLLVGHGLEHDLDSLR-----MN---------------YPDHMLRDTAKYRPLMKTN-------------LVSHSLKY 273 (353)
Q Consensus 227 ~~~~lvgh~~~~D~~~l~-----~~---------------~~~~~~~Dt~~l~~~~~~~-------------~~~~~L~~ 273 (353)
++..+|.++..+|+.+|- .. +|. +.|+..+.+..... ..+.+|+.
T Consensus 154 ~~v~Witfhg~yDfgyL~k~Lt~~~LP~~~~~F~~~l~~~FP~--iyD~K~l~~~~~~l~~~~~~~~~~~~~~~~~~L~~ 231 (289)
T 1uoc_A 154 DSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYMPN--FYDLNLVYKIIQEFKNPQLQQSSQQQQQQQYSLTT 231 (289)
T ss_dssp TTSEEEESSTTHHHHHHHHHHTTSCCCSSHHHHHHHHHHHCSS--EEEHHHHHHHHTTTCC-------------CCSHHH
T ss_pred CCceEEEccCcchHHHHHHHhccccCCcCHHHHHHHHHHhCcc--ceeHHHHHHHHHhccCcccccccccccccCCCHHH
Confidence 557899989999999876 11 343 77887766543221 23568999
Q ss_pred HHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhch
Q 018586 274 LTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQD 308 (353)
Q Consensus 274 l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~ 308 (353)
+|+.+ |++..+..|.|-.|+..|+.+|.++++..
T Consensus 232 lA~~L-~v~r~g~~HqAGsDSllT~~~F~kl~~~~ 265 (289)
T 1uoc_A 232 LADEL-GLPRFSIFTTTGGQSLLMLLSFCQLSKLS 265 (289)
T ss_dssp HHHHT-TCCCCGGGGSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHc-CCCccCcccccHHHHHHHHHHHHHHHHHH
Confidence 99998 98855559999999999999999999775
No 391
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.22 E-value=8.1e-05 Score=41.87 Aligned_cols=26 Identities=31% Similarity=0.569 Sum_probs=22.9
Q ss_pred ccccccccccCchhHHHH-HHHhcCCC
Q 018586 80 GCNLCMNIFDSPSSLIKH-KEACSLSA 105 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H-~~~h~~~k 105 (353)
.|+.|++.|.+.+.|..| +++|++++
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~~H~~~~ 30 (30)
T 1paa_A 4 ACGLCNRAFTRRDLLIRHAQKIHSGNL 30 (30)
T ss_dssp BCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred CCcccCcccCChHHHHHHHHHHccCCC
Confidence 588999999999999999 78898764
No 392
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.22 E-value=0.00012 Score=40.14 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=21.0
Q ss_pred ccccccccccCchhHHHHHHHhc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACS 102 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~ 102 (353)
.|+.||++|.+.+.|..|+++|+
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvh_A 5 SCSLCPQRSRDFSAMTKHLRTHG 27 (27)
T ss_dssp ECSSSSCEESSHHHHHHHHHHCC
T ss_pred cCCCcChhhCCHHHHHHHHHHcc
Confidence 58999999999999999999884
No 393
>1vk0_A Hypothetical protein; homohexamer, AT5G06450, struc genomics, protein structure initiative, center for eukaryot structural genomics, CESG; 2.10A {Arabidopsis thaliana} SCOP: c.55.3.5 PDB: 2q3s_A
Probab=97.22 E-value=0.00017 Score=61.69 Aligned_cols=89 Identities=17% Similarity=0.181 Sum_probs=67.3
Q ss_pred HHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhc--CcCCCCceeecccccCCcccC--CCCCcHHHHHHHHhCCc
Q 018586 207 KILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR--MNYPDHMLRDTAKYRPLMKTN--LVSHSLKYLTRTYLGYD 282 (353)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~--~~~~~~~~~Dt~~l~~~~~~~--~~~~~L~~l~~~~~~~~ 282 (353)
.|.+++ .+.+.+.|||++.+|+..|. .+.....++|+..++....+. ..+.+|+.|++.+||+.
T Consensus 99 ~L~~lL------------~d~~i~Kvg~~~~~D~~~L~~~~g~~~~~~~Dl~~la~~~lg~~~~~~~gL~~Lv~~~lg~~ 166 (206)
T 1vk0_A 99 DLYRFF------------ASKFVTFVGVQIEEDLDLLRENHGLVIRNAINVGKLAAEARGTLVLEFLGTRELAHRVLWSD 166 (206)
T ss_dssp HHHHHH------------TCSSSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHHHHHHHTCGGGGGCCHHHHHHHHHCCC
T ss_pred HHHHHh------------cCCCceEEEeccHHHHHHHHHhcCCCcCCeeeHHHHHHHHcCCCCCCCccHHHHHHHHhCCc
Confidence 467788 34667899999999999998 333335689998776544332 46789999999999999
Q ss_pred C-CC--------------CCCChHHHHHHHHHHHHHHHhc
Q 018586 283 I-QS--------------GVHDPYEDCVSVMRLYKRFRRQ 307 (353)
Q Consensus 283 ~-~~--------------~~H~Al~Da~~t~~l~~~~~~~ 307 (353)
+ .. .-+-|..||++..+||.++.++
T Consensus 167 lK~k~~~~SdW~~pLs~~Qi~YAA~Da~~l~~l~~~L~~~ 206 (206)
T 1vk0_A 167 LGQLDSIEAKWEKAGPEEQLEAAAIEGWLIVNVWDQLSDE 206 (206)
T ss_dssp CHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcccCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8 21 1245788999999999998753
No 394
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.13 E-value=0.0001 Score=40.74 Aligned_cols=24 Identities=17% Similarity=0.365 Sum_probs=21.4
Q ss_pred ccccccccccCchhHHHHHHHhcC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSL 103 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~ 103 (353)
.|+.|+++|...+.|..|+++|++
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~~h~~ 28 (28)
T 2kvf_A 5 SCSVCGKRFSLKHQMETHYRVHTG 28 (28)
T ss_dssp ECSSSCCEESCHHHHHHHHTTSCC
T ss_pred cCCCCCcccCCHHHHHHHHHhcCC
Confidence 588999999999999999998864
No 395
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.12 E-value=0.0003 Score=48.56 Aligned_cols=27 Identities=22% Similarity=0.568 Sum_probs=24.2
Q ss_pred ccccccccccCchhHHHHHHHhcCCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAP 106 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~ 106 (353)
.|..|+++|.+.+.|..|+++|++++.
T Consensus 15 ~C~~CgK~F~~~s~L~~H~r~Htg~~~ 41 (66)
T 2epp_A 15 PCGLCGKVFTDANRLRQHEAQHGVTSL 41 (66)
T ss_dssp CCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred CCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence 588899999999999999999998654
No 396
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.08 E-value=0.00011 Score=40.53 Aligned_cols=23 Identities=30% Similarity=0.395 Sum_probs=20.5
Q ss_pred ccccccccccCchhHHHHHHHhc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACS 102 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~ 102 (353)
.|+.||++|.+.+.|..|+++|+
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~~H~ 27 (27)
T 2kvg_A 5 RCPLCRAGCPSLASMQAHMRGHS 27 (27)
T ss_dssp EETTTTEEESCHHHHHHHHTTCC
T ss_pred CCCCCCcccCCHHHHHHHHHhcC
Confidence 58999999999999999998874
No 397
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=97.07 E-value=0.00021 Score=42.68 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=22.9
Q ss_pred ccc--cccccccCchhHHHHHHHhcCCC
Q 018586 80 GCN--LCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~--~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+ .|+++|...+.|..|+++|++++
T Consensus 10 ~C~~~~C~k~f~~~~~L~~H~~~H~~ek 37 (37)
T 1va1_A 10 ICHIQGCGKVYGKTSHLRAHLRWHTGER 37 (37)
T ss_dssp ECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence 477 59999999999999999998864
No 398
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.11 E-value=9.2e-05 Score=40.27 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=20.7
Q ss_pred ccccccccccCchhHHHHHHHhc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACS 102 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~ 102 (353)
.|+.||++|.+.+.|..|+++|+
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~~H~ 26 (26)
T 2lvu_A 4 VCERCGKRFVQSSQLANHIRHHD 26 (26)
Confidence 58899999999999999999874
No 399
>3pv8_A DNA polymerase I; DNA polymerase I, protein-DNA complex, thymine-adenine, CLOS conformation; HET: DNA 2DT D3T; 1.52A {Geobacillus kaustophilus} PDB: 3px0_A* 3px4_A* 3px6_A* 3thv_A* 3ti0_A* 4dse_A* 4dsf_A* 4ds4_A* 4dqp_A* 4dqi_A* 4ds5_A* 4e0d_A* 4dqr_A* 4dqq_A* 3tan_A* 3tap_A* 3taq_A* 3tar_A* 4dqs_A* 3hp6_A* ...
Probab=96.99 E-value=0.00043 Score=68.61 Aligned_cols=94 Identities=6% Similarity=0.010 Sum_probs=73.4
Q ss_pred HHHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhc---CcCCCCceeecccccCCcccCCCCCcHHHHHHHHhC
Q 018586 204 VKDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR---MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLG 280 (353)
Q Consensus 204 v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~---~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~ 280 (353)
+.+.|..++ .+.+...|+||+.+|+.+|. +..+ ..++||+..+..+.|...+++|++|++.|+|
T Consensus 69 ~l~~Lk~lL------------ed~~i~KV~hn~K~Dl~vL~~~Gi~l~-g~~fDTmLAAYLL~p~~~~~~L~~La~~yLg 135 (592)
T 3pv8_A 69 ADPQFVAWL------------GDETKKKSMFDSKRAAVALKWKGIELC-GVSFDLLLAAYLLDPAQGVDDVAAAAKMKQY 135 (592)
T ss_dssp TCHHHHHHH------------TCTTSEEEESSHHHHHHHHHHTTCCCC-CEEEEHHHHHHHHCGGGCCCSHHHHHGGGTC
T ss_pred HHHHHHHHH------------hCCCCeEEEechHHHHHHHHHcCCCCC-CccchHHHHHHHcCCCCCCCCHHHHHHHHcC
Confidence 446688888 33557899999999999996 3332 3578999999999888788999999999998
Q ss_pred CcCCCC------------------CCChHHHHHHHHHHHHHHHhchhh
Q 018586 281 YDIQSG------------------VHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 281 ~~~~~~------------------~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
..+... ...|.+||.++.+|+..+..+.++
T Consensus 136 ~~l~~~ee~~gkg~~~~~~~~e~~~~YAa~DA~~l~~L~~~L~~~L~e 183 (592)
T 3pv8_A 136 EAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRR 183 (592)
T ss_dssp CSSCCHHHHHCSGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHhcCccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 775311 134678999999999999877654
No 400
>1yt3_A Ribonuclease D, RNAse D; exoribonuclease, exonuclease, hydrolase, tRNA processing, hydrolase,translation; 1.60A {Escherichia coli} SCOP: a.60.8.3 a.60.8.3 c.55.3.5
Probab=96.86 E-value=0.0024 Score=59.84 Aligned_cols=83 Identities=12% Similarity=0.102 Sum_probs=63.7
Q ss_pred CCcEEEecccHHHHHHhc--CcCCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCC---------------CC
Q 018586 227 KARLLVGHGLEHDLDSLR--MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV---------------HD 289 (353)
Q Consensus 227 ~~~~lvgh~~~~D~~~l~--~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~---------------H~ 289 (353)
.+.+.|+||+.+|+.+|. .+.....++||+..+..+.+ ..+++|+.|++.|+|..+..+. .-
T Consensus 73 ~~i~Kv~h~~k~Dl~~L~~~~Gi~~~~~fDt~lAa~lL~~-~~~~~L~~L~~~~l~~~l~K~~~~sdw~~rpL~~~q~~Y 151 (375)
T 1yt3_A 73 PSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGR-PMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEY 151 (375)
T ss_dssp TTSEEEESSCHHHHHHHHHHHSSCCSSEEEHHHHHHHTTC-CTTCCHHHHHHHHHCCCCCCTTTTSCTTSSSCCHHHHHH
T ss_pred CCceEEEeeHHHHHHHHHHHcCCCCCcEEEcHHHHHHcCC-CCChhHHHHHHHHcCCCCCCCcccCCCCCCCCCHHHHHH
Confidence 446789999999999995 34333468999987776655 4589999999999888765431 11
Q ss_pred hHHHHHHHHHHHHHHHhchhh
Q 018586 290 PYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 290 Al~Da~~t~~l~~~~~~~~~~ 310 (353)
|..||..+..||..+..+..+
T Consensus 152 Aa~Da~~l~~L~~~L~~~L~~ 172 (375)
T 1yt3_A 152 AAADVWYLLPITAKLMVETEA 172 (375)
T ss_dssp HHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999877654
No 401
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=96.82 E-value=0.00032 Score=38.82 Aligned_cols=24 Identities=25% Similarity=0.430 Sum_probs=21.6
Q ss_pred ccc--cccccccCchhHHHHHHHhcC
Q 018586 80 GCN--LCMNIFDSPSSLIKHKEACSL 103 (353)
Q Consensus 80 ~C~--~C~k~F~~~s~L~~H~~~h~~ 103 (353)
.|+ .|+++|...+.|..|+++|++
T Consensus 4 ~C~~~~C~k~f~~~~~l~~H~~~H~~ 29 (29)
T 2ab3_A 4 VCHFENCGRSFNDRRKLNRHKKIHTG 29 (29)
T ss_dssp EECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred CCcCCcCcCccCCHHHHHHHHHHhCC
Confidence 588 999999999999999999864
No 402
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=96.81 E-value=0.00054 Score=43.39 Aligned_cols=26 Identities=15% Similarity=0.261 Sum_probs=22.9
Q ss_pred ccc--cccccccCchhHHHHHHHhcCCC
Q 018586 80 GCN--LCMNIFDSPSSLIKHKEACSLSA 105 (353)
Q Consensus 80 ~C~--~C~k~F~~~s~L~~H~~~h~~~k 105 (353)
.|+ .|+++|...+.|..|+++|++++
T Consensus 20 ~C~~~~C~k~F~~~~~L~~H~~~H~~ek 47 (47)
T 1ncs_A 20 ECLFPGCTKTFKRRYNIRSHIQTHLEDR 47 (47)
T ss_dssp ECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred ECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence 474 79999999999999999999874
No 403
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.79 E-value=0.0005 Score=40.93 Aligned_cols=25 Identities=20% Similarity=0.202 Sum_probs=21.6
Q ss_pred ccccccccccCchhHHHH-HHHhcCC
Q 018586 80 GCNLCMNIFDSPSSLIKH-KEACSLS 104 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H-~~~h~~~ 104 (353)
.|+.|+++|...+.|..| +++|+++
T Consensus 11 ~C~~C~k~f~~~~~L~~H~~~~H~~~ 36 (37)
T 2elm_A 11 YCSQCHYSSITKNCLKRHVIQKHSNI 36 (37)
T ss_dssp ECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred ECCCCCcccCCHHHHHHHHHHHccCc
Confidence 588899999999999999 8888764
No 404
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=96.78 E-value=0.00037 Score=44.46 Aligned_cols=27 Identities=15% Similarity=0.372 Sum_probs=22.4
Q ss_pred ccccccccccCchhHHHHHH-HhcCCCC
Q 018586 80 GCNLCMNIFDSPSSLIKHKE-ACSLSAP 106 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~-~h~~~k~ 106 (353)
.|..|+++|...+.|..|++ +|+++.+
T Consensus 9 ~C~~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 9 ACDICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp ECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred ECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence 58899999999999999999 8987655
No 405
>1s5j_A DNA polymerase I; replication, disulfide bonds, transferase; HET: DNA; 2.40A {Sulfolobus solfataricus} SCOP: c.55.3.5 e.8.1.1
Probab=96.69 E-value=0.0092 Score=61.73 Aligned_cols=151 Identities=16% Similarity=0.181 Sum_probs=88.1
Q ss_pred cCCCceeeccCcc-ccc-c--CCCC---ccceeEEeeecCCCCeEEeeeccCCCCccccccccCCCCHhhhcCCCChHHH
Q 018586 132 CRGPKAVAMDCEM-VGG-G--SNGT---LDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEV 204 (353)
Q Consensus 132 ~~~~~~~~~D~Et-tg~-~--~~~~---~~il~~v~ivd~~g~~~~~~lv~P~~~i~~~~~~~~GIt~e~l~~~~~~~~v 204 (353)
.+..++++||+|+ ++. + ++.. ..+ ..+++++.+|...+ .++++... +..... |....+...++..++
T Consensus 187 ~p~l~ilsfDIEt~s~~~g~fP~~~~~~d~I-i~Is~~~~~g~~~~-~~~~~~~~-~~~~~~---i~~~~v~~~~~E~~L 260 (847)
T 1s5j_A 187 IPKIKRVAIDIEVYTPVKGRIPDSQKAEFPI-ISIALAGSDGLKKV-LVLNRNDV-NEGSVK---LDGISVERFNTEYEL 260 (847)
T ss_dssp CCCCCEEEEEEEECCSSSSCCCCTTTCCSCE-EEEEEEETTSCEEE-EEECSSCC-CCCCEE---ETTEEEEEESSHHHH
T ss_pred CCCceEEEEEEEeCcCCCCCCCCccccCCcE-EEEEEEccCCCcEE-EEEeCCcc-cccccC---CCCCeEEEeCCHHHH
Confidence 5677899999999 742 1 2221 233 35566656664321 22333211 110111 222335556789999
Q ss_pred HHHHHHHHhcCCCCcccccCCCCCcEEEeccc-HHHHHHhc-----CcC-----CC------------CceeecccccCC
Q 018586 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-----MNY-----PD------------HMLRDTAKYRPL 261 (353)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-----~~~-----~~------------~~~~Dt~~l~~~ 261 (353)
+..|.+++.+ - .+|||||. .||+.+|. ++. |. ...+|...+...
T Consensus 261 L~~f~~~i~~------------~-diivgyN~~~FDlPyL~~Ra~~lgi~~~~~p~~~~gr~~~~i~gr~~~Dl~~~~~~ 327 (847)
T 1s5j_A 261 LGRFFDILLE------------Y-PIVLTFNGDDFDLPYIYFRALKLGYFPEEIPIDVAGKDEAKYLAGLHIDLYKFFFN 327 (847)
T ss_dssp HHHHHHHHTT------------C-SEEEESSTTTTHHHHHHHHHHTTTCCGGGCSEECCSTTCCEETTSEEEEHHHHHTS
T ss_pred HHHHHHHhcc------------C-CEEEEeCCCCchHHHHHHHHHHcCCCcccCCeeecCCCceEeccEEEeehHHHHhh
Confidence 9999999932 2 38999995 68999987 222 11 223455544332
Q ss_pred -------cccCCCCCcHHHHHHHHhCCcCCCCC-------------CChHHHHHHHHHHHH
Q 018586 262 -------MKTNLVSHSLKYLTRTYLGYDIQSGV-------------HDPYEDCVSVMRLYK 302 (353)
Q Consensus 262 -------~~~~~~~~~L~~l~~~~~~~~~~~~~-------------H~Al~Da~~t~~l~~ 302 (353)
+.....+++|+.+++.+||.. ...- .-.+.||..|..|+.
T Consensus 328 ~~~~~y~f~~kl~sysL~~Va~~~Lg~~-K~dv~~~i~~~~~~~l~~Ycl~Da~lt~~L~~ 387 (847)
T 1s5j_A 328 KAVRNYAFEGKYNEYNLDAVAKALLGTS-KVKVDTLISFLDVEKLIEYNFRDAEITLQLTT 387 (847)
T ss_dssp HHHHHHTSTTCCSSCSHHHHHHHHHCCC-CC--SSCTTTCCHHHHHHHHHHHHHHHHHTTT
T ss_pred hhhhhhccccccccccHHHHHHHHhCCC-CcchhHhhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 112346899999999998875 2211 113569999999953
No 406
>3qex_A DNA polymerase, GP43; difluorotoluene nucleoside; HET: DNA DOC DGT; 1.73A {Enterobacteria phage RB69} PDB: 3qei_A* 3qer_A* 3qes_A* 3qet_A* 3qep_A* 3qew_A* 3qev_A* 3s9h_A* 3sq0_A* 4dtn_A* 4dto_A* 4dtp_A* 4dtr_A* 4dts_A* 4dtu_A* 4dtx_A* 4e3s_A* 4fjm_A* 4fjl_A* 3spz_A* ...
Probab=96.66 E-value=0.0084 Score=61.97 Aligned_cols=159 Identities=14% Similarity=0.109 Sum_probs=99.0
Q ss_pred cCCCceeeccCcccccc--C--C-CCccceeEEeeecCCCCeE--EeeeccCCCCcccccc---------ccCCCCHhhh
Q 018586 132 CRGPKAVAMDCEMVGGG--S--N-GTLDLCARVCLVDEDENVI--FHTYVQPQLPVTNYRY---------EVTGLTEEDI 195 (353)
Q Consensus 132 ~~~~~~~~~D~Ettg~~--~--~-~~~~il~~v~ivd~~g~~~--~~~lv~P~~~i~~~~~---------~~~GIt~e~l 195 (353)
.+..+.+.+|+|++..+ + . ...+| ..|++.|..+... |+.+-.|...+.++.. .-..+..+.+
T Consensus 105 ~~~ir~~~~DIEv~~~~~fPd~~~~~~~I-i~It~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (903)
T 3qex_A 105 HTKIRVANFDIEVTSPDGFPEPSQAKHPI-DAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEII 183 (903)
T ss_dssp GGGSCEEEEEEECCCTTSSCCTTTCCSCC-CEEEEEETTTTEEEEEEECEETTEECCCCCHHHHHSCGGGTCCCCCHHHH
T ss_pred cccccEEEEeEEeCCCCCCCCcccCCCCE-EEEEEEeCCCCEEEEEEeeccccccccccccccccccccccccccccccC
Confidence 35678999999998632 2 1 23445 5888888877764 3344444333333221 1122344433
Q ss_pred cC-----CCChHHHHHHHHHHHhcCCCCcccccCCCCCcEEEeccc-HHHHHHhc-----C-c------C----------
Q 018586 196 KN-----AMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-----M-N------Y---------- 247 (353)
Q Consensus 196 ~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-----~-~------~---------- 247 (353)
.+ .++-.+++..|.++|...++ .+|+|||+ .||+.+|. + + +
T Consensus 184 ~~v~v~~f~sE~eLL~~F~~~I~~~DP-----------DIItGyN~~~FDlPYL~~RA~~l~gi~~~~~ls~~gR~~~~~ 252 (903)
T 3qex_A 184 DKIIYMPFDNEKELLMEYLNFWQQKTP-----------VILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKV 252 (903)
T ss_dssp TTEEEEEESSHHHHHHHHHHHHHHTCC-----------SEEECSSTTTTHHHHHHHHHHHHHCHHHHGGGSTTSCEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHHhCC-----------CEEEecCCccCCHHHHHHHHHHHcCCcccccccccccccccc
Confidence 32 36788999999999965543 69999995 57988875 1 1 0
Q ss_pred -------------CCCceeecccccCCc-ccCCCCCcHHHHHHHHhCCcCCCCCCC----------------hHHHHHHH
Q 018586 248 -------------PDHMLRDTAKYRPLM-KTNLVSHSLKYLTRTYLGYDIQSGVHD----------------PYEDCVSV 297 (353)
Q Consensus 248 -------------~~~~~~Dt~~l~~~~-~~~~~~~~L~~l~~~~~~~~~~~~~H~----------------Al~Da~~t 297 (353)
+...++|+..+.+.. .....+|+|+.+|+.+||..- ..-+. .+.||..+
T Consensus 253 ~~~~~G~~~~~~i~GRv~lDl~~~~k~~~~~~l~SYsLd~VA~~lLg~~K-~d~~~~I~~~~~~d~~~L~~Ycl~Da~Lt 331 (903)
T 3qex_A 253 IENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNVGK-LKYDGPISKLRESNHQRYISYNIIAVYRV 331 (903)
T ss_dssp EEETTEEEEEEEETTCEECCHHHHHHHHSCCCCSCCCHHHHHHHHHCCCC-CCCSSCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcCCceeEEEeCeEEeeHHHHHHHhCccCcCCCCHHHHHHHHcCCCc-cccHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 011144555555432 235668999999999998873 22221 15699999
Q ss_pred HHHHHH
Q 018586 298 MRLYKR 303 (353)
Q Consensus 298 ~~l~~~ 303 (353)
++|+.+
T Consensus 332 ~~L~~K 337 (903)
T 3qex_A 332 LQIDAK 337 (903)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999987
No 407
>3iay_A DNA polymerase delta catalytic subunit; protein-DNA complex, DNA replication, DNA-BI DNA-directed DNA polymerase, exonuclease, hydrolase; HET: DNA DOC DCP; 2.00A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.0055 Score=63.82 Aligned_cols=150 Identities=14% Similarity=0.172 Sum_probs=88.4
Q ss_pred cCCCceeeccCcccccc---CC-CCccceeEEe-eecCCCCe--EEe-ee-ccCCCCccccccccCCCCHhhhcCCCChH
Q 018586 132 CRGPKAVAMDCEMVGGG---SN-GTLDLCARVC-LVDEDENV--IFH-TY-VQPQLPVTNYRYEVTGLTEEDIKNAMPLK 202 (353)
Q Consensus 132 ~~~~~~~~~D~Ettg~~---~~-~~~~il~~v~-ivd~~g~~--~~~-~l-v~P~~~i~~~~~~~~GIt~e~l~~~~~~~ 202 (353)
.++.+++++|+|+.+.+ ++ ...+| ..++ ++...|.. ... .+ +.+.. .+....|...++..
T Consensus 246 ~PplrilSfDIEt~~~~g~fP~~~~D~I-i~IS~~v~~~g~~~~~~r~~f~l~~~~----------~~~~~~V~~~~sE~ 314 (919)
T 3iay_A 246 TAPLRIMSFDIECAGRIGVFPEPEYDPV-IQIANVVSIAGAKKPFIRNVFTLNTCS----------PITGSMIFSHATEE 314 (919)
T ss_dssp CCCCEEEEEEEEECCCTTSCCCTTTCCE-EEEEEEEEETTCSSCSEEEEEEESCCC----------CBTTBEEEEESSHH
T ss_pred CCCceEEEEEEEECCCCCCCCCCCCCcE-EEEEEEEecCCCcccceeEEEEecCCC----------CCCCCeEEECCCHH
Confidence 46778999999998531 22 22233 2333 33334432 111 11 11111 12223456677889
Q ss_pred HHHHHHHHHHhcCCCCcccccCCCCCcEEEeccc-HHHHHHhc-----CcCCC---------------------------
Q 018586 203 EVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-----MNYPD--------------------------- 249 (353)
Q Consensus 203 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-----~~~~~--------------------------- 249 (353)
+++..|.++|...++ .+|||||+ .||+.+|. +..+.
T Consensus 315 eLL~~F~~~i~~~DP-----------DIIvGyNi~~FDlpyL~~Ra~~lgi~~~~~lGR~~~~~~~~~~~~~~~~~~g~~ 383 (919)
T 3iay_A 315 EMLSNWRNFIIKVDP-----------DVIIGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKESVFSSKAYGTR 383 (919)
T ss_dssp HHHHHHHHHHHHHCC-----------SEEEESSTTTTHHHHHHHHHHHTTCTTCSCCSSBTTCCCCBCCEEEEETTTEEE
T ss_pred HHHHHHHHHHHHhCC-----------CEEEecCCccCCHHHHHHHHHHcCCCchhhhccccCcccccccccccccccccc
Confidence 999999999965433 69999997 68999986 11110
Q ss_pred ---------CceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCCC---------C----------hHHHHHHHHHHH
Q 018586 250 ---------HMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVH---------D----------PYEDCVSVMRLY 301 (353)
Q Consensus 250 ---------~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H---------~----------Al~Da~~t~~l~ 301 (353)
..++|+..+.+.. ....+|+|+.++..+||.....-.+ + .+.||..+++|+
T Consensus 384 ~~~~~~i~GR~~lDl~~~~k~~-~~l~sysL~~Va~~~Lg~~K~dv~~~~I~~l~~~~~~~~~~L~~Y~~~Da~l~~~L~ 462 (919)
T 3iay_A 384 ETKNVNIDGRLQLDLLQFIQRE-YKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLM 462 (919)
T ss_dssp EECCBCCTTCEEEEHHHHHHHH-CCCSCCCHHHHHHHHHCCC------CCHHHHHTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeEEcCeEEEEhHHHHHhh-cCCCCCCHHHHHHHhcccCCCCCCHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 1234554444332 3567999999999999976321122 1 156999999998
Q ss_pred HHH
Q 018586 302 KRF 304 (353)
Q Consensus 302 ~~~ 304 (353)
.++
T Consensus 463 ~kl 465 (919)
T 3iay_A 463 EKL 465 (919)
T ss_dssp HHT
T ss_pred HHH
Confidence 876
No 408
>2a1r_A Poly(A)-specific ribonuclease PARN; DEDD, nuclease domain, hydrolase-RNA complex; 2.60A {Homo sapiens} PDB: 2a1s_A
Probab=96.65 E-value=0.0064 Score=57.85 Aligned_cols=82 Identities=16% Similarity=0.144 Sum_probs=59.6
Q ss_pred CCcEEEecccHHHHHHhc-------------------CcCCCCceeecccccCCcc--cCCCCCcHHHHHHHHhCCcC--
Q 018586 227 KARLLVGHGLEHDLDSLR-------------------MNYPDHMLRDTAKYRPLMK--TNLVSHSLKYLTRTYLGYDI-- 283 (353)
Q Consensus 227 ~~~~lvgh~~~~D~~~l~-------------------~~~~~~~~~Dt~~l~~~~~--~~~~~~~L~~l~~~~~~~~~-- 283 (353)
.+.+|||||.-.|+-++- --+|. ++||..++.... ......+|..|.+.+...+.
T Consensus 280 s~KpiVGHN~llDl~~l~~~F~~pLP~~~~eFk~~i~~lFP~--i~DTK~la~~~~~~~~~~~~sL~~l~~~l~~~~~~~ 357 (430)
T 2a1r_A 280 SGKLVIGHNMLLDVMHTVHQFYCPLPADLSEFKEMTTCVFPR--LLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNP 357 (430)
T ss_dssp HCCEEEESSCHHHHHHHHHHHTCCCCSSHHHHHHHHHHHCSS--EEEHHHHHTSTTTTTTCSCCSHHHHHHHTTSTTCCC
T ss_pred CCCceEechhHHHHHHHHHHhccCCCCCHHHHHHHHHHHCCc--eeehHHhhhccchhhccCCCCHHHHHHHHHhCCCCC
Confidence 457999999999999776 11565 899987774431 22345789999887733211
Q ss_pred ---------------CCCCCChHHHHHHHHHHHHHHHhchhh
Q 018586 284 ---------------QSGVHDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 284 ---------------~~~~H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
....|.|-.||.+|+.+|.++...+..
T Consensus 358 p~i~~~~~~~~y~~~~~~~HeAGyDa~mTG~vFi~l~~~l~~ 399 (430)
T 2a1r_A 358 PKVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGS 399 (430)
T ss_dssp CCEEECTTCCCC-----CCCCHHHHHHHHHHHHHHHHHHHGG
T ss_pred CeeecCCCccccccCCCCccchHHHHHHHHHHHHHHHHHHhh
Confidence 122699999999999999999987644
No 409
>3d45_A Poly(A)-specific ribonuclease PARN; CAP analogue, exonuclease, hydrolase, magnesium, metal nonsense-mediated mRNA decay, nucleus; HET: 7MG GDP; 3.00A {Mus musculus}
Probab=96.64 E-value=0.0035 Score=61.01 Aligned_cols=81 Identities=19% Similarity=0.153 Sum_probs=60.0
Q ss_pred CCcEEEecccHHHHHHhc-------------------CcCCCCceeecccccCC--cccCCCCCcHHHHHHHHhC----C
Q 018586 227 KARLLVGHGLEHDLDSLR-------------------MNYPDHMLRDTAKYRPL--MKTNLVSHSLKYLTRTYLG----Y 281 (353)
Q Consensus 227 ~~~~lvgh~~~~D~~~l~-------------------~~~~~~~~~Dt~~l~~~--~~~~~~~~~L~~l~~~~~~----~ 281 (353)
.+.+|||||.-.|+-+|- .-+|. ++||..++.. +.......+|..|.+.+-. .
T Consensus 275 ~~kpiVgHN~l~Dl~~l~~~F~~pLP~~~~eFk~~i~~lFP~--i~DTK~la~~~~~~~~~~~~~L~~l~~~l~~~~~~~ 352 (507)
T 3d45_A 275 SGKLVVGHNMLLDVMHTIHQFYCPLPADLNEFKEMAICVFPR--LLDTKLMASTQPFKDIINNTSLAELEKRLKETPFDP 352 (507)
T ss_dssp HCCEEEESSCHHHHHHHHHHHTCSCCSSHHHHHHHHHHHCSC--EEEHHHHTTSTTHHHHCCCCCHHHHHHHTTSTTCCC
T ss_pred CCCeEEEechHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCc--eeEhHhhhhcCccccccCCCCHHHHHHHHhccCCCC
Confidence 457999999999999987 11554 8999988865 2223346799999998831 1
Q ss_pred cC-------------CCCCCChHHHHHHHHHHHHHHHhchh
Q 018586 282 DI-------------QSGVHDPYEDCVSVMRLYKRFRRQDH 309 (353)
Q Consensus 282 ~~-------------~~~~H~Al~Da~~t~~l~~~~~~~~~ 309 (353)
+- .+..|.|-.||.+|+.+|.++.....
T Consensus 353 p~i~~~~~~~~y~~~~~~~HeAGyDA~mTg~~F~kl~~~l~ 393 (507)
T 3d45_A 353 PKVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLG 393 (507)
T ss_dssp CCEEECTTSCCCC----CCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CeEEecccccccccCCCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 10 11279999999999999999987654
No 410
>2hbj_A Exosome complex exonuclease RRP6; RNA metabolism, RNA surveillance, RNA processing, hydrolase, gene regulation; 2.10A {Saccharomyces cerevisiae} SCOP: a.60.8.4 c.55.3.5 PDB: 2hbk_A 2hbl_A* 2hbm_A*
Probab=96.51 E-value=0.0052 Score=58.22 Aligned_cols=82 Identities=20% Similarity=0.205 Sum_probs=62.8
Q ss_pred CCcEEEecccHHHHHHhc--CcCCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCC---------------CC
Q 018586 227 KARLLVGHGLEHDLDSLR--MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGV---------------HD 289 (353)
Q Consensus 227 ~~~~lvgh~~~~D~~~l~--~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~---------------H~ 289 (353)
.+.+.|+||+.+|+.+|. .+.....++||+..+..+.+. +++|+.|++.|+|..+..+. .-
T Consensus 158 ~~i~KV~h~~k~Dl~~L~~~~Gi~~~~~fDt~lAa~LL~~~--~~~L~~L~~~~lg~~l~K~~~~sdW~~rpL~~~q~~Y 235 (410)
T 2hbj_A 158 PSIVKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIGLP--RHSLAYLLENFANFKTSKKYQLADWRIRPLSKPMTAA 235 (410)
T ss_dssp TTSEEEESSCHHHHHHHHHHHCCCCSSEEEHHHHHHHHTCS--CCSHHHHHHHHSCCCCCCTTTTSCTTCSSCCHHHHHH
T ss_pred CCceEEEEehHHHHHHHHHHcCCCcCCEEEcHHHHHHhCCC--ccCHHHHHHHHcCCCCCccccccCCCCCCCCHHHHHH
Confidence 456789999999999996 343333489999877666543 69999999999888765431 11
Q ss_pred hHHHHHHHHHHHHHHHhchhh
Q 018586 290 PYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 290 Al~Da~~t~~l~~~~~~~~~~ 310 (353)
|..||.++..||..+..+..+
T Consensus 236 Aa~Da~~ll~L~~~L~~~L~~ 256 (410)
T 2hbj_A 236 ARADTHFLLNIYDQLRNKLIE 256 (410)
T ss_dssp HHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 568999999999999888654
No 411
>2gv9_A DNA polymerase; polymerase alpha fold, transferase; HET: DNA; 2.68A {Human herpesvirus 1} PDB: 1dml_B*
Probab=96.36 E-value=0.028 Score=60.02 Aligned_cols=100 Identities=13% Similarity=0.045 Sum_probs=67.0
Q ss_pred hcCCCChHHHHHHHHHHHhcCCCCcccccCCCCCcEEEeccc-HHHHHHhc--------CcCCC----------------
Q 018586 195 IKNAMPLKEVKDKILEILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR--------MNYPD---------------- 249 (353)
Q Consensus 195 l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~--------~~~~~---------------- 249 (353)
|....+-.+++..|.++|...++ .+|||||+ .||+.+|. +..+.
T Consensus 395 V~~~~sE~eLL~~F~~~I~~~DP-----------DIIvGyNi~~FDlpyL~~Ra~~~~gl~l~~~GRl~r~~~~k~~~~~ 463 (1193)
T 2gv9_A 395 VLEFDSEFEMLLAFMTLVKQYGP-----------EFVTGYNIINFDWPFLLAKLTDIYKVPLDGYGRMNGRGVFRVWDIG 463 (1193)
T ss_dssp EEEESSHHHHHHHHHHHHHHHCC-----------SEEEESSTTTTHHHHHHHHHHHTTCCCCTTTSSBSSSCCEEECC--
T ss_pred EEecCCHHHHHHHHHHHHHhcCC-----------CEEEEcCCcCccHHHHHHHHHHHcCCChHHhcccccCCcceeeccc
Confidence 44557788999999999965543 59999996 67999876 11110
Q ss_pred --------------CceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCCCC-------------------hHHHHHH
Q 018586 250 --------------HMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHD-------------------PYEDCVS 296 (353)
Q Consensus 250 --------------~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~-------------------Al~Da~~ 296 (353)
..++|+..+.+... ...+|+|+.+++.+||..-..-.+. .+.||..
T Consensus 464 ~~~f~~~~~~~i~GRv~lDl~~~~~~~~-kl~sYsL~~Va~~~Lg~~K~dv~~~eI~~~~~~~~~~r~~L~~Ycl~Da~l 542 (1193)
T 2gv9_A 464 QSHFQKRSKIKVNGMVNIDMYGIITDKI-KLSSYKLNAVAEAVLKDKKKDLSYRDIPAYYATGPAQRGVIGEYCIQDSLL 542 (1193)
T ss_dssp --------CEEETTBEEEEHHHHHTTTC-CCSCCCHHHHHHHTSCCCCCCCCTTTHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred cccccccceEEEcCeEeehHHHHHHHHh-ccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHcCChhHHHHHHHHHHHHHH
Confidence 12456555443322 4568999999999988763211111 2458889
Q ss_pred HHHHHHHHHh
Q 018586 297 VMRLYKRFRR 306 (353)
Q Consensus 297 t~~l~~~~~~ 306 (353)
+++||.+++.
T Consensus 543 t~~L~~kl~~ 552 (1193)
T 2gv9_A 543 VGQLFFKFLP 552 (1193)
T ss_dssp HHHHHHHHCH
T ss_pred HHHHHHHHHH
Confidence 9999888743
No 412
>3k59_A POL II, DNA polymerase II; protein-DNA complex, DNA damage, DNA repair, DNA-binding; HET: DNA DOC DCP; 1.92A {Escherichia coli} PDB: 3k57_A* 3k58_A* 3k5l_A* 3k5m_A* 3k5n_A* 3k5o_A* 3maq_A* 1q8i_A*
Probab=96.10 E-value=0.029 Score=57.35 Aligned_cols=146 Identities=16% Similarity=0.252 Sum_probs=86.6
Q ss_pred ccCCCceeeccCccccccCCCCccceeEEeeecCCCCeEEeeeccCCCCccccccccCCCCHhhhcCCCChHHHHHHHHH
Q 018586 131 TCRGPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQLPVTNYRYEVTGLTEEDIKNAMPLKEVKDKILE 210 (353)
Q Consensus 131 ~~~~~~~~~~D~Ettg~~~~~~~~il~~v~ivd~~g~~~~~~lv~P~~~i~~~~~~~~GIt~e~l~~~~~~~~v~~~~~~ 210 (353)
..+.-++++||+|+.+. .. + -.+.+.+...+.++ .+-.+..+. .+..-.|.-.++-.+++..|.+
T Consensus 149 ~~p~lrilsfDIE~~~~--g~---i-~~I~~~~~~~~~v~-~l~~~~~~~--------~~~~~~V~~f~~E~~lL~~f~~ 213 (786)
T 3k59_A 149 YRPPLKWVSIDIETTRH--GE---L-YCIGLEGCGQRIVY-MLGPENGDA--------SSLDFELEYVASRPQLLEKLNA 213 (786)
T ss_dssp CCCCCCEEEEEEEECTT--SC---E-EEEEEEETTEEEEE-EESSCCSCC--------TTCSSEEEEESSHHHHHHHHHH
T ss_pred CCCCCeEEEEEEEEcCC--CC---E-EEEEecCCCCCeEE-EEecCCCCC--------CCCCceEEEeCCHHHHHHHHHH
Confidence 46788999999999953 22 2 23334322211121 111111100 1111234445678899999999
Q ss_pred HHhcCCCCcccccCCCCCcEEEeccc-HHHHHHhc-----CcCC---------------------------CCceeeccc
Q 018586 211 ILNNGESTGRLMLDDGKARLLVGHGL-EHDLDSLR-----MNYP---------------------------DHMLRDTAK 257 (353)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~lvgh~~-~~D~~~l~-----~~~~---------------------------~~~~~Dt~~ 257 (353)
++...++ .+|||||+ .||+.+|. ...+ ...++|+..
T Consensus 214 ~i~~~dP-----------Dii~g~N~~~FD~pyL~~Ra~~~~i~~~lGR~~~~~~~~~~~~~~~~~~~~i~GRv~lDl~~ 282 (786)
T 3k59_A 214 WFANYDP-----------DVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIE 282 (786)
T ss_dssp HHHHHCC-----------SEEEESSTTTTHHHHHHHHHHHHTCCCCCBTTTBCCEEEECSSSTTCEEEECTTCEEEEHHH
T ss_pred HHHHcCC-----------CEEEecCCccCcHHHHHHHHHHhCCCceeccCCCcccccccccCCCceeEEEcCEEEEEhHH
Confidence 9965543 49999996 47999986 1111 012345544
Q ss_pred ccCCcccCCCCCcHHHHHHHHhCCcCCCCCCCh----------------------HHHHHHHHHHHHHH
Q 018586 258 YRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDP----------------------YEDCVSVMRLYKRF 304 (353)
Q Consensus 258 l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~A----------------------l~Da~~t~~l~~~~ 304 (353)
+.+.......+|+|+++|+.+||.. .. .|+. +.||..+++||.++
T Consensus 283 ~lk~~~~~l~SysL~~Va~~~Lg~~-K~-~~~~~~~~~eI~~~~~~~~~~L~~Y~l~Da~L~~~L~~kl 349 (786)
T 3k59_A 283 ALKSAFWNFSSFSLETVAQELLGEG-KS-IDNPWDRMDEIDRRFAEDKPALATYNLKNCELVTQIFHKT 349 (786)
T ss_dssp HHHHTTCCCSCCSHHHHHHHHHCCC-CC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCHHHHHHHHhCCC-Cc-ccCccccHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 4432223567999999999998876 22 2322 57999999999885
No 413
>3cym_A Uncharacterized protein BAD_0989; structural genomics, unknown function; 2.10A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=95.84 E-value=0.02 Score=54.73 Aligned_cols=90 Identities=16% Similarity=0.168 Sum_probs=65.5
Q ss_pred HHHHHHHHhcCCCCcccccCCCCCcEEEecccHHHHHHhc-CcCCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcC
Q 018586 205 KDKILEILNNGESTGRLMLDDGKARLLVGHGLEHDLDSLR-MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDI 283 (353)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~-~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~ 283 (353)
...|.+++ .+...|+|++.+|+.+|. .+.....++||+..+..+.+ . +++|..|++.|+|...
T Consensus 84 l~~L~~lL--------------~d~~KV~h~~k~Dl~~L~~~gi~~~~~fDt~lAa~lL~~-~-~~gL~~L~~~~lg~~~ 147 (440)
T 3cym_A 84 WNDFNRAV--------------GDAVWILHDSLQDLPGFDELGMEPQRLFDTEIAARLLGL-K-RFGLAAVTEHFLGLTL 147 (440)
T ss_dssp HHHHHHHH--------------TTCEEEESSHHHHHHHHHHHTCCCCEEEEHHHHHHHTTC-S-SCSHHHHHHHHHCEEC
T ss_pred HHHHHHHH--------------CCCCEEEEcCHHHHHHHHHcCCcCCceehHHHHHHHhCC-C-CCCHHHHHHHHhCCCc
Confidence 35677888 445789999999999986 12212368999765555554 3 8999999999988765
Q ss_pred CCCC---------------CChHHHHHHHHHHHHHHHhchhh
Q 018586 284 QSGV---------------HDPYEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 284 ~~~~---------------H~Al~Da~~t~~l~~~~~~~~~~ 310 (353)
..+. .-|..||..+..||..+..+...
T Consensus 148 ~K~~~~sdw~~rpLs~~q~~YAa~Da~~Ll~L~~~L~~~L~~ 189 (440)
T 3cym_A 148 AKEHSAADWSYRPLPRDWRNYAALDVELLIELETKMRAELKR 189 (440)
T ss_dssp CCCCTTCCTTCSSCCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccccccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4431 12678999999999998877543
No 414
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=95.41 E-value=0.0039 Score=48.30 Aligned_cols=31 Identities=23% Similarity=0.487 Sum_probs=28.6
Q ss_pred CCCCCCCCceeeccccccccChHHHHHHHhh
Q 018586 6 ELPKRSTARHKCVACYKQFKRKDHLIEHMKI 36 (353)
Q Consensus 6 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (353)
...|+|++||.|..|++.|.+.+.|..|++.
T Consensus 42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rs 72 (124)
T 1zr9_A 42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRS 72 (124)
T ss_dssp CSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred cccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence 5678999999999999999999999999976
No 415
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=92.05 E-value=0.15 Score=34.48 Aligned_cols=25 Identities=16% Similarity=0.135 Sum_probs=19.7
Q ss_pred eccccccccChHHHHHHHh-hhcCCCCC
Q 018586 17 CVACYKQFKRKDHLIEHMK-ISYHSVHQ 43 (353)
Q Consensus 17 C~~C~k~f~~~~~l~~H~~-~~~h~~~~ 43 (353)
+..|++.|.....|..|+. . |.+.+
T Consensus 6 W~~C~~~f~~~~~l~~Hv~~~--Hv~~~ 31 (64)
T 1zw8_A 6 WKECPESASSLFDLQRHLLKD--HVSQD 31 (64)
T ss_dssp CTTCCCCCSSHHHHHHHHHHH--SCCCC
T ss_pred eCCCCCcCCCHHHHHHHHHhh--ccCcc
Confidence 4469999999999999984 6 77654
No 416
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.74 E-value=0.16 Score=31.63 Aligned_cols=24 Identities=33% Similarity=0.591 Sum_probs=22.3
Q ss_pred CceeeccccccccChHHHHHHHhh
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKI 36 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~ 36 (353)
.+|.|+.|+..|.....|+.|+..
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmky 34 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCY 34 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhhh
Confidence 689999999999999999999985
No 417
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.29 E-value=0.32 Score=30.33 Aligned_cols=22 Identities=27% Similarity=0.448 Sum_probs=19.4
Q ss_pred ccccccccccCchhHHHHHHHh
Q 018586 80 GCNLCMNIFDSPSSLIKHKEAC 101 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h 101 (353)
.|+.|++.|....+|+.||+-.
T Consensus 14 ~CPrCn~~f~~~~sLr~Hmkyc 35 (49)
T 2e72_A 14 ICPRCNAQFRVTEALRGHMCYC 35 (49)
T ss_dssp CCTTTCCCCSSHHHHHHHHHHH
T ss_pred eCCcccccccchHHHHhhhhhc
Confidence 4899999999999999999843
No 418
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=85.22 E-value=0.79 Score=35.49 Aligned_cols=73 Identities=18% Similarity=0.294 Sum_probs=43.2
Q ss_pred CceeeccccccccChHHHHHHH--hhhcCCCC-CC-ccccC-------cccCCChHHHHhccCCCCCCCCCCcccccccc
Q 018586 13 ARHKCVACYKQFKRKDHLIEHM--KISYHSVH-QP-KCAVC-------QKLSKSFESLREHLTGPLSKAHCSGIFSDRGC 81 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~--~~~~h~~~-~~-~C~~C-------~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C 81 (353)
+++.|..|...|.+.+.+..|. +. |... +. .+ .+ ++.+... .+... +..-....|
T Consensus 31 ~~~~C~~C~v~~~S~s~~~~H~~gkk--H~~~v~~~~~-~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~C 96 (127)
T 1zu1_A 31 SDTQCKVCSAVLISESQKLAHYQSRK--HANKVRRYMA-INQGEDSVPAKKFKAA----PAEIS-------DGEDRSKCC 96 (127)
T ss_dssp CSSEETTTTEECCSHHHHHHHHHCHH--HHHHHHHHHH-HTTCCCCCSCCCCSCC----SSCCS-------SCCCTTTEE
T ss_pred CCCcCcCCCCEeCCHHHHHHHHCcHH--HHHHHHHHhc-ccCcccCCCCCccCCC----ccccc-------cCCCCCeEc
Confidence 5789999999999999999998 34 4321 11 11 11 1111110 01100 000111249
Q ss_pred ccccccccCchhHHHHHH
Q 018586 82 NLCMNIFDSPSSLIKHKE 99 (353)
Q Consensus 82 ~~C~k~F~~~s~L~~H~~ 99 (353)
..|++.|.+.+.+..|..
T Consensus 97 ~~C~~~f~s~~~~~~H~~ 114 (127)
T 1zu1_A 97 PVCNMTFSSPVVAESHYI 114 (127)
T ss_dssp TTTTEECSSHHHHHHHHT
T ss_pred CCCCCEeCCHHHHHHHHC
Confidence 999999999999999965
No 419
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=84.95 E-value=0.6 Score=31.38 Aligned_cols=51 Identities=24% Similarity=0.324 Sum_probs=26.3
Q ss_pred ccCcccCCChHHHHhcc----CCCCCCCCCCccccccccc--cccccccCchhHHHHHHHh
Q 018586 47 AVCQKLSKSFESLREHL----TGPLSKAHCSGIFSDRGCN--LCMNIFDSPSSLIKHKEAC 101 (353)
Q Consensus 47 ~~C~~~f~~~~~l~~H~----~~~~~c~~Cgk~f~~~~C~--~C~k~F~~~s~L~~H~~~h 101 (353)
..|++.|.+...|..|+ .+..+ ...-....|. .|++.+.....|..|+++.
T Consensus 7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~----~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~ 63 (64)
T 1zw8_A 7 KECPESASSLFDLQRHLLKDHVSQDF----KHPMEPLACNWEDCDFLGDDTASIVNHINAQ 63 (64)
T ss_dssp TTCCCCCSSHHHHHHHHHHHSCCCCC----CCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred CCCCCcCCCHHHHHHHHHhhccCccc----CCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence 35777777777777776 11110 0000011343 5666666666777777654
No 420
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=82.28 E-value=0.48 Score=29.40 Aligned_cols=21 Identities=24% Similarity=0.513 Sum_probs=14.3
Q ss_pred CCCCCCCcccccc--------cccccccc
Q 018586 67 LSKAHCSGIFSDR--------GCNLCMNI 87 (353)
Q Consensus 67 ~~c~~Cgk~f~~~--------~C~~C~k~ 87 (353)
|.|--||+.|+.. .|++||..
T Consensus 4 Y~C~rCg~~fs~~el~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 4 YRCGKCWKTFTDEQLKVLPGVRCPYCGYK 32 (48)
T ss_dssp -CCCCTTTTCCCCCSCCCSSSCCTTTCCS
T ss_pred EEeeccCCCccHHHHhhCCCcccCccCcE
Confidence 5677778777765 38888843
No 421
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=81.86 E-value=0.47 Score=36.56 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=18.5
Q ss_pred ccccccccccCchhHHHHHHHh
Q 018586 80 GCNLCMNIFDSPSSLIKHKEAC 101 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h 101 (353)
.|..|++.|.+.+.|..|+++.
T Consensus 52 yC~~C~K~F~~~~~L~~H~rsK 73 (124)
T 1zr9_A 52 RCLACARYFIDSTNLKTHFRSK 73 (124)
T ss_dssp EETTTTEECSSHHHHHHHTTCH
T ss_pred EcccCcchhCCHHHHHHHHhhh
Confidence 5888999999999999997753
No 422
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=78.63 E-value=0.82 Score=32.67 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=23.1
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCccc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEK 111 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~ 111 (353)
.|-+||+.|. .|++|.++|+|..|..+..
T Consensus 23 iClecGK~fK---~LkRHL~~~hgltpeeYR~ 51 (87)
T 2jsp_A 23 VCLECGGSFK---SLKRHLTTHHSMTPEEYRE 51 (87)
T ss_dssp ECTBTCCEES---BHHHHHHHTTCSCHHHHHH
T ss_pred EecccchhhH---HHHHHHHHccCCCHHHHHH
Confidence 3889999887 5889999988888865543
No 423
>3ikm_A DNA polymerase subunit gamma-1; human mitochondrial DNA polymerase, disease mutation, DNA replication, DNA-binding, DNA-directed DNA polymerase; HET: DNA; 3.24A {Homo sapiens}
Probab=77.21 E-value=0.43 Score=49.57 Aligned_cols=84 Identities=17% Similarity=0.216 Sum_probs=56.4
Q ss_pred CCcEEEecccHHHHHHhc----CcCCCCceeecccccCCccc--------------------------------------
Q 018586 227 KARLLVGHGLEHDLDSLR----MNYPDHMLRDTAKYRPLMKT-------------------------------------- 264 (353)
Q Consensus 227 ~~~~lvgh~~~~D~~~l~----~~~~~~~~~Dt~~l~~~~~~-------------------------------------- 264 (353)
..++|||||+.||...+. +......++||+.|.--..+
T Consensus 193 ~~rlIVGHNVsyDRARI~EeY~l~~sk~rFlDTMSLHvavsG~~s~QR~~w~~~kk~k~~~~~e~~~~~~~~~~~~~~p~ 272 (1172)
T 3ikm_A 193 QEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMAISGLSSFQRSLWIAAKQGKHKVQPPTKQGQKSQRKARRGPA 272 (1172)
T ss_dssp SCCCCBCBCSSSSTTGGGTSSCSSCCCCCCCBTTHHHHHHSCCCHHHHHHHHHHHHC-----------------------
T ss_pred CccEEEeCCcchhHHHHHHHHhcccCCceeeechhhhhhccccchhhHHHHHHhhhhcccchhhHHHHhhhccccccCcc
Confidence 568999999999999988 33344778999965421111
Q ss_pred --------CCCCC--cHHHHHHHHhCC-cCCCCCCCh--------------------HHHHHHHHHHHHHHHhchhh
Q 018586 265 --------NLVSH--SLKYLTRTYLGY-DIQSGVHDP--------------------YEDCVSVMRLYKRFRRQDHQ 310 (353)
Q Consensus 265 --------~~~~~--~L~~l~~~~~~~-~~~~~~H~A--------------------l~Da~~t~~l~~~~~~~~~~ 310 (353)
..--. +|.++++.+.|+ +++....+. ..|+.+|.+||.+++=.+.+
T Consensus 273 ~~~~~W~~~sS~N~~SL~dV~~lhcg~~~ldK~~Rd~Fv~~~~~dI~~~fq~Lm~YCA~DV~aTh~V~~kl~P~F~e 349 (1172)
T 3ikm_A 273 ISSWDWLDISSVNSNSLAEVHRLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFLE 349 (1172)
T ss_dssp ---CCCCCCCCTTSHHHHHHHTCSSCSCS--SCSSSSTTTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCcccccCCCcCCHHHHHHHhCCCcccChhhHhhhhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 00013 788988888886 554442221 34999999999998766543
No 424
>2py5_A DNA polymerase; protein-DNA complex, replication, transferase/DNA complex; HET: DNA; 1.60A {Bacillus phage PHI29} SCOP: c.55.3.5 e.8.1.1 PDB: 1xhz_A* 1xhx_A* 2ex3_A* 1xi1_A* 2pyj_A* 2pyl_A* 2pzs_A*
Probab=76.71 E-value=2.5 Score=41.56 Aligned_cols=37 Identities=8% Similarity=0.019 Sum_probs=26.0
Q ss_pred CCcHHHHHHHHhCCcCCCC--CC----------------ChHHHHHHHHHHHHHHH
Q 018586 268 SHSLKYLTRTYLGYDIQSG--VH----------------DPYEDCVSVMRLYKRFR 305 (353)
Q Consensus 268 ~~~L~~l~~~~~~~~~~~~--~H----------------~Al~Da~~t~~l~~~~~ 305 (353)
..+|+.+++.| +++.+.+ .| =.+.||+.+++++...+
T Consensus 127 ~~SL~~~a~~f-~~~~~K~~~py~~~~~~~~~~~~~~~~Y~~~Dv~ll~~i~~~~f 181 (575)
T 2py5_A 127 PFPVKKIAKDF-KLTVLKGDIDYHKERPVGYKITPEEYAYIKNDIQIIAEALLIQF 181 (575)
T ss_dssp CSCHHHHHHHT-TCCCCSSCCCTTSCCCTTCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHh-CCcccCCccCccccCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999998 6652222 11 13679999999998663
No 425
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=72.14 E-value=4.3 Score=23.45 Aligned_cols=28 Identities=25% Similarity=0.529 Sum_probs=23.2
Q ss_pred CceeeccccccccChHHHHHHHhhhcCCC
Q 018586 13 ARHKCVACYKQFKRKDHLIEHMKISYHSV 41 (353)
Q Consensus 13 k~~~C~~C~k~f~~~~~l~~H~~~~~h~~ 41 (353)
..|.|+.|.+.|.....|..|-... |+.
T Consensus 4 EGFiCP~C~~~l~s~~~L~~Hye~~-H~~ 31 (34)
T 3mjh_B 4 EGFICPQCMKSLGSADELFKHYEAV-HDA 31 (34)
T ss_dssp EEEECTTTCCEESSHHHHHHHHHHH-TSS
T ss_pred cccCCcHHHHHcCCHHHHHHHHHhc-ccc
Confidence 3599999999999999999998642 554
No 426
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=69.54 E-value=2.4 Score=34.26 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=21.2
Q ss_pred cccccccccCchhHHHHHHHhcCCCCCCcccCCcc
Q 018586 81 CNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSN 115 (353)
Q Consensus 81 C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~ 115 (353)
|+.|+..+ ....|..|....-..++-.|+.|...
T Consensus 113 C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~ 146 (170)
T 3hcs_A 113 CPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAAS 146 (170)
T ss_dssp CTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCE
T ss_pred CCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCc
Confidence 66677666 45556677765555666667766544
No 427
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=68.26 E-value=8.3 Score=22.45 Aligned_cols=26 Identities=15% Similarity=0.424 Sum_probs=22.4
Q ss_pred CCCceeeccccccccChHHHHHHHhh
Q 018586 11 STARHKCVACYKQFKRKDHLIEHMKI 36 (353)
Q Consensus 11 ~~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (353)
....+.|..|.-+|.....+..|++-
T Consensus 5 ~~~~~~C~~C~IsF~~l~ty~aHKk~ 30 (36)
T 1fu9_A 5 EVMKKYCSTCDISFNYVKTYLAHKQF 30 (36)
T ss_dssp CCCCSEETTTTEECSSHHHHHHHHHH
T ss_pred ccCcCeeccccceehhhHHHhhhhee
Confidence 45678899999999999999999875
No 428
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.77 E-value=5 Score=26.09 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=31.4
Q ss_pred CCCCCCCCccccccccccccccccCchhHHHHHHHhcCC
Q 018586 66 PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLS 104 (353)
Q Consensus 66 ~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~ 104 (353)
...|.+|+. .....|+.|+..|.+-.-.+.|.....+.
T Consensus 12 ~~~C~vC~~-~~kY~CPrC~~~yCSl~C~k~Hk~~C~~~ 49 (56)
T 2yqq_A 12 TVVCVICLE-KPKYRCPACRVPYCSVVCFRKHKEQCNPE 49 (56)
T ss_dssp CCCCTTTCS-CCSEECTTTCCEESSHHHHHHHHHHCCCC
T ss_pred CCccCcCcC-CCeeeCCCCCCCeeCHHHHHHHHhhCcCC
Confidence 345899999 88889999999999999999998775443
No 429
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=62.47 E-value=3.1 Score=30.81 Aligned_cols=11 Identities=27% Similarity=0.624 Sum_probs=4.9
Q ss_pred CCCCCCCCccc
Q 018586 66 PLSKAHCSGIF 76 (353)
Q Consensus 66 ~~~c~~Cgk~f 76 (353)
++.|..||..|
T Consensus 67 p~~C~~CG~~F 77 (105)
T 2gmg_A 67 PAQCRKCGFVF 77 (105)
T ss_dssp CCBBTTTCCBC
T ss_pred CcChhhCcCee
Confidence 33444444444
No 430
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=62.04 E-value=4.9 Score=23.22 Aligned_cols=22 Identities=41% Similarity=0.647 Sum_probs=19.1
Q ss_pred ccccccccccCchhHHHHHHHh
Q 018586 80 GCNLCMNIFDSPSSLIKHKEAC 101 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h 101 (353)
.||.|.+.|.....|..|-...
T Consensus 7 iCP~C~~~l~s~~~L~~Hye~~ 28 (34)
T 3mjh_B 7 ICPQCMKSLGSADELFKHYEAV 28 (34)
T ss_dssp ECTTTCCEESSHHHHHHHHHHH
T ss_pred CCcHHHHHcCCHHHHHHHHHhc
Confidence 4999999999999999997643
No 431
>1bgx_T TAQ DNA polymerase; DNA polymerase, FAB, PCR, inhibition, helix-coil dynamics, inhibitor design, complex (polymerase/inhibitor); 2.30A {Thermus aquaticus} SCOP: a.60.7.1 c.120.1.2 c.55.3.5 e.8.1.1 PDB: 1cmw_A 1tau_A* 1taq_A*
Probab=59.94 E-value=5 Score=41.23 Aligned_cols=67 Identities=13% Similarity=0.057 Sum_probs=51.7
Q ss_pred ccHHHHHHhc---CcCCCCceeecccccCCcccCCCCCcHHHHHHHHhCCcCCCCCCChHHHHHHHHHHHHHHHhchh
Q 018586 235 GLEHDLDSLR---MNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGVHDPYEDCVSVMRLYKRFRRQDH 309 (353)
Q Consensus 235 ~~~~D~~~l~---~~~~~~~~~Dt~~l~~~~~~~~~~~~L~~l~~~~~~~~~~~~~H~Al~Da~~t~~l~~~~~~~~~ 309 (353)
|+.+|+.+|. +... .+.||+..+..+.|. .++|+.|++.| |.. .... ..+||.+|.+|+..+..+..
T Consensus 352 n~K~d~~~L~~~Gi~~~--~~~Dt~laayLl~p~--~~~l~~l~~~~-gk~-~~~~--ya~da~~~~~l~~~l~~~L~ 421 (832)
T 1bgx_T 352 LAKDLSVLALREGLGLP--PGDDPMLLAYLLDPS--NTTPEGVARRY-GGE-WTEE--AGERAALSERLFANLWGRLE 421 (832)
T ss_dssp THHHHHHHHHHHTCCCC--BCCCHHHHHHHHCTT--CCSTTHHHHHH-SCC-CCSS--HHHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHcCCccC--cccCHHHHHHHcCCC--CCCHHHHHHHh-CCC-chHH--HHHHHHHHHHHHHHHHHHHh
Confidence 9999999996 3333 468999988888776 78999999999 643 1112 23799999999999987655
No 432
>3q7c_A Nucleoprotein; deddh exonuclease, 3' exonuclease, hydrolase; 1.50A {Lassa virus} PDB: 3q7b_A 4fvu_A
Probab=58.02 E-value=8.2 Score=32.15 Aligned_cols=140 Identities=17% Similarity=0.182 Sum_probs=83.2
Q ss_pred CceeeccCccccccCCCCccceeEEeeecCCCCeEEeeeccCCC--CccccccccCCCCHhhhcCCCChHHHHHHHHHHH
Q 018586 135 PKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEIL 212 (353)
Q Consensus 135 ~~~~~~D~Ettg~~~~~~~~il~~v~ivd~~g~~~~~~lv~P~~--~i~~~~~~~~GIt~e~l~~~~~~~~v~~~~~~~~ 212 (353)
..-..+|+|-.. ..-. .+++.-.+..-.++-|=.|.. .+.+....-|||--.||.++.| -+...++..|
T Consensus 57 ~~ttWiDIEG~p---~DPV----ElAiyQP~sg~YIHcyR~P~D~K~FK~~SKySHGillkDl~~aqP--GL~S~vi~~L 127 (243)
T 3q7c_A 57 NAKTWMDIEGRP---EDPV----EIALYQPSSGCYIHFFREPTDLKQFKQDAKYSHGIDVTDLFATQP--GLTSAVIDAL 127 (243)
T ss_dssp TSCCEEEEESCT---TSCS----EEEEEETTTTEEEEEECCCSCHHHHHHHHHHTTCBCGGGGTTBCT--THHHHHHHHS
T ss_pred CCCeEEecCCCC---CCCe----EEEEeccCCCcEEEEecCCcchhhhcccCccccceehhhhhhcCC--chHHHHHHhC
Confidence 334568888663 3333 334433444444567777775 4666677789999999999877 5667778888
Q ss_pred hcCCCCcccccCCCCCcEEEecccHHHHHHhcCcCC-CCceeecccc---cCCcccCCCCCcHHHHHHHHhCCcCC----
Q 018586 213 NNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP-DHMLRDTAKY---RPLMKTNLVSHSLKYLTRTYLGYDIQ---- 284 (353)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~-~~~~~Dt~~l---~~~~~~~~~~~~L~~l~~~~~~~~~~---- 284 (353)
+.+.+|-+.+.+-=.+.|.+.-. ...+||+..- ++.+- ..-.-+...||...-|+-+.
T Consensus 128 -------------P~nMVlT~QGsDDIrkLld~hGRrDiKlIDV~lt~eqaR~FE-d~VWd~f~~LC~~H~GvVv~KKKk 193 (243)
T 3q7c_A 128 -------------PRNMVITCQGSDDIRKLLESQGRKDIKLIDIALSKTDSRKYE-NAVWDQYKDLCHMHTGVVVEKKKR 193 (243)
T ss_dssp -------------CTTCEEEESSHHHHHHHHHHTTCTTSEEEECCCCHHHHTTTH-HHHHHHHGGGCCCBCSCEECCCSS
T ss_pred -------------CcCcEEEeeChHHHHHHHHhcCCccceEEEeecCHHHHHHHH-HHHHHHHHHHHHhcCceEEecccc
Confidence 58899999996544444553332 2667887532 22221 10011222334433333222
Q ss_pred -----CCCCChHHHHHHH
Q 018586 285 -----SGVHDPYEDCVSV 297 (353)
Q Consensus 285 -----~~~H~Al~Da~~t 297 (353)
...|-||-|+++-
T Consensus 194 g~~~s~~PHCALLDCIMF 211 (243)
T 3q7c_A 194 GGKEEITPHCALMDCIMF 211 (243)
T ss_dssp SSCCEECCCCHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHH
Confidence 2379999999863
No 433
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=56.99 E-value=3.1 Score=33.51 Aligned_cols=23 Identities=22% Similarity=0.236 Sum_probs=16.2
Q ss_pred CCCCCCCCCccccc----ccccccccc
Q 018586 65 GPLSKAHCSGIFSD----RGCNLCMNI 87 (353)
Q Consensus 65 ~~~~c~~Cgk~f~~----~~C~~C~k~ 87 (353)
..|.|..||+.|.. ..||.||..
T Consensus 131 ~~y~C~~Cg~~~~~~~~~~~Cp~CG~~ 157 (165)
T 2lcq_A 131 WRYVCIGCGRKFSTLPPGGVCPDCGSK 157 (165)
T ss_dssp CCEEESSSCCEESSCCGGGBCTTTCCB
T ss_pred EEEECCCCCCcccCCCCCCcCCCCCCc
Confidence 35668888888862 248888865
No 434
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=56.56 E-value=2.8 Score=29.73 Aligned_cols=27 Identities=19% Similarity=0.308 Sum_probs=16.7
Q ss_pred CCCCCCCCCccccc------cccccccccccCc
Q 018586 65 GPLSKAHCSGIFSD------RGCNLCMNIFDSP 91 (353)
Q Consensus 65 ~~~~c~~Cgk~f~~------~~C~~C~k~F~~~ 91 (353)
..|+|+.||+.... ..|+.|++.|...
T Consensus 26 ~~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~agg 58 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGG 58 (83)
T ss_dssp SCEECSSSCCEEEEEEETTEEEETTTCCEEECC
T ss_pred ccCcCCCCCCcceeccCCCeEECCCCCCEecCC
Confidence 46677777763321 1488888876543
No 435
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=56.21 E-value=3.4 Score=28.81 Aligned_cols=18 Identities=39% Similarity=0.674 Sum_probs=11.2
Q ss_pred ccccCcccCCChHHHHhcc
Q 018586 45 KCAVCQKLSKSFESLREHL 63 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~ 63 (353)
+|+.||..... ..|...+
T Consensus 10 ~~PlCG~~L~W-~eLIeQM 27 (95)
T 2k5c_A 10 KCPICGSPLKW-EELIEEM 27 (95)
T ss_dssp ECSSSCCEECH-HHHHHHS
T ss_pred cCCcCCCccCH-HHHHHHH
Confidence 78888877654 3344444
No 436
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=55.15 E-value=7.5 Score=24.86 Aligned_cols=20 Identities=15% Similarity=0.541 Sum_probs=14.9
Q ss_pred eeeccccccccChHHHHHHH
Q 018586 15 HKCVACYKQFKRKDHLIEHM 34 (353)
Q Consensus 15 ~~C~~C~k~f~~~~~l~~H~ 34 (353)
-.|..|+..|.....+..|+
T Consensus 14 ~eC~lC~vkYs~r~slqDHI 33 (55)
T 2yrk_A 14 PECTLCGVKYSARLSIRDHI 33 (55)
T ss_dssp SCCTTTTCCCCSSSCHHHHH
T ss_pred ccccccCcccccccchhhhh
Confidence 47888888777777777766
No 437
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.81 E-value=6.7 Score=27.24 Aligned_cols=23 Identities=26% Similarity=0.512 Sum_probs=17.5
Q ss_pred cccccccccc-------CchhHHHHHHHhc
Q 018586 80 GCNLCMNIFD-------SPSSLIKHKEACS 102 (353)
Q Consensus 80 ~C~~C~k~F~-------~~s~L~~H~~~h~ 102 (353)
.|..|++.+. ..++|.+|.+.++
T Consensus 30 ~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H 59 (76)
T 2djr_A 30 TCRLCGRQVSRGPGVNVGTTALWKHLKSMH 59 (76)
T ss_dssp EESSSCCBCCCCSSCCSSSCHHHHHHHHTT
T ss_pred ECCCCCCccCCCCCCCCchHHHHHHHHHHC
Confidence 4777777765 4789999998766
No 438
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=51.63 E-value=16 Score=25.45 Aligned_cols=50 Identities=18% Similarity=0.279 Sum_probs=32.3
Q ss_pred CCCCceeeccccccccChHHHHHHHhhhcCCCC-CCccccCcccCCChHHHHhcc
Q 018586 10 RSTARHKCVACYKQFKRKDHLIEHMKISYHSVH-QPKCAVCQKLSKSFESLREHL 63 (353)
Q Consensus 10 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~~h~~~-~~~C~~C~~~f~~~~~l~~H~ 63 (353)
..=..|.|+.||.+++- ..+..|... -.+- ...|..|++.|.. ...+.|.
T Consensus 6 ~~MV~F~C~~Cgd~lKK-~kv~~H~~~--Cr~~~~~SCIDC~~~F~~-~~y~~Ht 56 (79)
T 1wjv_A 6 SGMVFFTCNACGESVKK-IQVEKHVSN--CRNCECLSCIDCGKDFWG-DDYKSHV 56 (79)
T ss_dssp CCCCEEEESSSCCEEET-THHHHHHHH--CTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred CceeEEEcCCCCCeeec-ccchhHHhh--CCCCCcEEecccCCeeCC-CCEeCEe
Confidence 34456899999988774 558888764 3332 2377778877764 3345554
No 439
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=51.63 E-value=10 Score=28.98 Aligned_cols=27 Identities=15% Similarity=0.207 Sum_probs=19.6
Q ss_pred CCCCCceeeccccccccChHHHHHHHh
Q 018586 9 KRSTARHKCVACYKQFKRKDHLIEHMK 35 (353)
Q Consensus 9 h~~~k~~~C~~C~k~f~~~~~l~~H~~ 35 (353)
+.+.+.|.|..|.+.|.+...+..|..
T Consensus 88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~ 114 (127)
T 1zu1_A 88 DGEDRSKCCPVCNMTFSSPVVAESHYI 114 (127)
T ss_dssp SCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred cCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence 445667778888887877777777764
No 440
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=50.97 E-value=3.9 Score=30.78 Aligned_cols=28 Identities=14% Similarity=0.317 Sum_probs=19.9
Q ss_pred CCCCCCCCCCc-cccc-----cccccccccccCc
Q 018586 64 TGPLSKAHCSG-IFSD-----RGCNLCMNIFDSP 91 (353)
Q Consensus 64 ~~~~~c~~Cgk-~f~~-----~~C~~C~k~F~~~ 91 (353)
...|.|+.||+ .+.. +.|..|++.|.-.
T Consensus 58 ~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAGG 91 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGG 91 (116)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTTCCEEECC
T ss_pred ccCCcCCCCCCceeEecCceeEECCCCCCEEECC
Confidence 45788999998 3332 2499999998654
No 441
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=46.54 E-value=5.3 Score=27.28 Aligned_cols=9 Identities=33% Similarity=0.379 Sum_probs=3.6
Q ss_pred CCCCCCCcc
Q 018586 67 LSKAHCSGI 75 (353)
Q Consensus 67 ~~c~~Cgk~ 75 (353)
|.|..||..
T Consensus 29 Y~C~~CG~~ 37 (70)
T 1twf_L 29 YICAECSSK 37 (70)
T ss_dssp EECSSSCCE
T ss_pred EECCCCCCc
Confidence 334444433
No 442
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=43.14 E-value=8.2 Score=26.52 Aligned_cols=27 Identities=11% Similarity=0.112 Sum_probs=15.3
Q ss_pred CCCCCCCCCcc-ccc-----cccccccccccCc
Q 018586 65 GPLSKAHCSGI-FSD-----RGCNLCMNIFDSP 91 (353)
Q Consensus 65 ~~~~c~~Cgk~-f~~-----~~C~~C~k~F~~~ 91 (353)
..+.|+.||+. +.. ..|..|++.|.-.
T Consensus 26 ~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AGG 58 (73)
T 1ffk_W 26 KKYKCPVCGFPKLKRASTSIWVCGHCGYKIAGG 58 (73)
T ss_pred cCccCCCCCCceeEEEEeEEEECCCCCcEEECC
Confidence 45566666652 221 2377777776543
No 443
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=42.39 E-value=14 Score=20.80 Aligned_cols=22 Identities=27% Similarity=0.658 Sum_probs=18.9
Q ss_pred cccccccccCchhHHHHHHHhc
Q 018586 81 CNLCMNIFDSPSSLIKHKEACS 102 (353)
Q Consensus 81 C~~C~k~F~~~s~L~~H~~~h~ 102 (353)
|..|.+.|.+-.+|..|.|..+
T Consensus 12 crfckkkysdvknlikhire~h 33 (37)
T 2elu_A 12 CRFCKKKYSDVKNLIKHIRDAH 33 (37)
T ss_dssp ETTTTEECSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999988543
No 444
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=42.17 E-value=12 Score=22.23 Aligned_cols=24 Identities=21% Similarity=0.284 Sum_probs=19.0
Q ss_pred CCceeeccccccccChHHHHHHHhh
Q 018586 12 TARHKCVACYKQFKRKDHLIEHMKI 36 (353)
Q Consensus 12 ~k~~~C~~C~k~f~~~~~l~~H~~~ 36 (353)
...+.|+.|++.+.. .....|..-
T Consensus 7 ~~~~~C~~C~~~i~~-~~~~EH~D~ 30 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPV-WDMPEHMDY 30 (39)
T ss_dssp CCEEECTTTCCEEEG-GGHHHHHHH
T ss_pred CCCcccccccCcCCc-ccccchhhH
Confidence 456899999999887 456888776
No 445
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=41.97 E-value=12 Score=25.54 Aligned_cols=9 Identities=22% Similarity=0.777 Sum_probs=5.2
Q ss_pred ccccccccc
Q 018586 81 CNLCMNIFD 89 (353)
Q Consensus 81 C~~C~k~F~ 89 (353)
|..|++.|.
T Consensus 47 C~~C~~~~A 55 (72)
T 3jyw_9 47 CSCCKKTVA 55 (72)
T ss_dssp CSSSCCCCC
T ss_pred CCCCCCEEe
Confidence 566665554
No 446
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=41.33 E-value=16 Score=19.96 Aligned_cols=22 Identities=27% Similarity=0.333 Sum_probs=18.8
Q ss_pred ceeeccccccccChHHHHHHHh
Q 018586 14 RHKCVACYKQFKRKDHLIEHMK 35 (353)
Q Consensus 14 ~~~C~~C~k~f~~~~~l~~H~~ 35 (353)
.|.|+.|.........++.|-.
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHHH
Confidence 4889999999999888888865
No 447
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=39.50 E-value=12 Score=25.53 Aligned_cols=25 Identities=24% Similarity=0.604 Sum_probs=12.9
Q ss_pred ccccCcccCCChHHHHhccCCCCCCCCCCccc
Q 018586 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f 76 (353)
.|..|+..|... .+.+-|..||+.|
T Consensus 13 ~C~~C~~~F~~~-------~RrHHCR~CG~v~ 37 (73)
T 1vfy_A 13 ACMICSKKFSLL-------NRKHHCRSCGGVF 37 (73)
T ss_dssp BCTTTCCBCBTT-------BCCEECTTTCCEE
T ss_pred cccCCCCccCCc-------cccccCCCCCEEE
Confidence 566666655421 2334455666555
No 448
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=37.48 E-value=20 Score=33.30 Aligned_cols=141 Identities=17% Similarity=0.177 Sum_probs=82.3
Q ss_pred CCceeeccCccccccCCCCccceeEEeeecCCCCeEEeeeccCCC--CccccccccCCCCHhhhcCCCChHHHHHHHHHH
Q 018586 134 GPKAVAMDCEMVGGGSNGTLDLCARVCLVDEDENVIFHTYVQPQL--PVTNYRYEVTGLTEEDIKNAMPLKEVKDKILEI 211 (353)
Q Consensus 134 ~~~~~~~D~Ettg~~~~~~~~il~~v~ivd~~g~~~~~~lv~P~~--~i~~~~~~~~GIt~e~l~~~~~~~~v~~~~~~~ 211 (353)
+..-..+|+|-.. +.-. .+++.-.+..-.++.|=.|.. .+.+....-|||--.||.++.| -+...++..
T Consensus 390 p~~ttWiDIEG~p---~DPV----E~AiyQP~~g~YiHcyR~P~D~K~FK~~SkysHGillkDl~~aqP--GL~S~vi~~ 460 (577)
T 3mwp_A 390 PNAKTWMDIEGRP---EDPV----EIALYQPSSGCYIHFFREPTDLKQFKQDAKYSHGIDVTDLFATQP--GLTSAVIDA 460 (577)
T ss_dssp TTSCEEEEEESCT---TSCS----EEEEEETTTTEEEEEECCCSCHHHHHHHHHHTTCBCGGGGGGBCT--THHHHHHHH
T ss_pred CCCCeEEecCCCC---CCCe----EEEEeccCCCcEEEEecCCcchhhhcccCccccceehhhhhhcCC--chHHHHHHh
Confidence 3344567777653 3333 334433444445677777875 4666677789999999999877 566777777
Q ss_pred HhcCCCCcccccCCCCCcEEEecccHHHHHHhcCcCC-CCceeecccc---cCCcccCCCCCcHHHHHHHHhCCcCC---
Q 018586 212 LNNGESTGRLMLDDGKARLLVGHGLEHDLDSLRMNYP-DHMLRDTAKY---RPLMKTNLVSHSLKYLTRTYLGYDIQ--- 284 (353)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~lvgh~~~~D~~~l~~~~~-~~~~~Dt~~l---~~~~~~~~~~~~L~~l~~~~~~~~~~--- 284 (353)
+ +.+.+|-+.+.+-=.+.|.+.-. ...+||+..- ++.+. ..-.-+...||...-|+-+.
T Consensus 461 L-------------P~~mV~T~QGsdDI~kLld~hGR~DiK~iDV~lt~eqaR~fE-d~VW~~~~~LC~~H~GiVv~kKK 526 (577)
T 3mwp_A 461 L-------------PRNMVITCQGSDDIRKLLESQGRKDIKLIDIALSKTDSRKYE-NAVWDQYKDLCHMHTGVVVEKKK 526 (577)
T ss_dssp S-------------CTTCEEEESSHHHHHHHHHHTTCTTCEEEECCCCHHHHTTTH-HHHHHHHGGGCCCBCSCEEECC-
T ss_pred C-------------CcCcEEEeeChHHHHHHHHhcCCccceEEEeecCHHHHHHHH-HHHHHHHHHHHHhcCceEEeccc
Confidence 7 58889999996544444443332 2667886532 22221 00011122333333333221
Q ss_pred ------CCCCChHHHHHHH
Q 018586 285 ------SGVHDPYEDCVSV 297 (353)
Q Consensus 285 ------~~~H~Al~Da~~t 297 (353)
...|-||-|+++-
T Consensus 527 kg~~~~~~pHCALlDCiMF 545 (577)
T 3mwp_A 527 RGGKEEITPHCALMDCIMF 545 (577)
T ss_dssp ----EEECCCCHHHHHHHH
T ss_pred CCCCCCCCchHHHHHHHHH
Confidence 3379999999863
No 449
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=36.89 E-value=13 Score=26.18 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=16.0
Q ss_pred CCCCCCCCCccccc------cccccccccccC
Q 018586 65 GPLSKAHCSGIFSD------RGCNLCMNIFDS 90 (353)
Q Consensus 65 ~~~~c~~Cgk~f~~------~~C~~C~k~F~~ 90 (353)
..|.|+.||+.-.. +.|..|++.|.-
T Consensus 34 ~ky~CpfCGk~~vkR~a~GIW~C~kCg~~~AG 65 (83)
T 3j21_i 34 QKHTCPVCGRKAVKRISTGIWQCQKCGATFAG 65 (83)
T ss_dssp SCBCCSSSCSSCEEEEETTEEEETTTCCEEEC
T ss_pred cccCCCCCCCceeEecCcCeEEcCCCCCEEeC
Confidence 46667777765221 148888877754
No 450
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=36.77 E-value=26 Score=35.82 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=27.0
Q ss_pred CCCCCCCccccccccccccccccCchhHHHHHHH-hc-----------CCCCCCcccCCcc
Q 018586 67 LSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA-CS-----------LSAPVPFEKTLSN 115 (353)
Q Consensus 67 ~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~-h~-----------~~k~~~c~~~~~~ 115 (353)
..|..|+|+| |+--+. +..|++..|... ++ |+...+|-.|++.
T Consensus 26 ~~c~~~~~wf----cn~~~~--~~~shi~~hl~~~~~~~~~l~~~~~~~~~~~~c~~c~~~ 80 (802)
T 2xzl_A 26 IKCNSCKKWF----CNTKNG--TSSSHIVNHLVLSHHNVVSLHPDSDLGDTVLECYNCGRK 80 (802)
T ss_dssp EEETTTCCEE----ECCCSS--SSSCHHHHHHHHHTCCCEEECTTSSSCSCBCCCSSSCCC
T ss_pred EEeCCCCcEe----cCCCCC--CCccHHHHHHHHccCCeeeccCCCCCCCceeEeecCCCC
Confidence 3477777777 333332 356888888643 22 5667788888755
No 451
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=36.30 E-value=14 Score=29.98 Aligned_cols=24 Identities=29% Similarity=0.636 Sum_probs=20.0
Q ss_pred eeeccccccccChHHHHHHHhhhcCCC
Q 018586 15 HKCVACYKQFKRKDHLIEHMKISYHSV 41 (353)
Q Consensus 15 ~~C~~C~k~f~~~~~l~~H~~~~~h~~ 41 (353)
|+|..||+ +....++.+|++. |..
T Consensus 155 YKCe~CgK-YvDId~~~~Hlk~--Hg~ 178 (226)
T 2czr_A 155 YKCEECGK-YVDIENLEAHLRE--HGI 178 (226)
T ss_dssp EECTTTCC-EEEGGGHHHHHHT--TTC
T ss_pred EehhhcCc-eecHHHHHHHHHH--cCc
Confidence 78999998 6667889999998 654
No 452
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=35.81 E-value=16 Score=25.52 Aligned_cols=25 Identities=24% Similarity=0.424 Sum_probs=14.9
Q ss_pred ccccCcccCCChHHHHhccCCCCCCCCCCccc
Q 018586 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f 76 (353)
.|..|+..|... .+.+-|..||+.|
T Consensus 21 ~C~~C~~~Fs~~-------~RrHHCR~CG~v~ 45 (82)
T 2yw8_A 21 HCRQCEKEFSIS-------RRKHHCRNCGHIF 45 (82)
T ss_dssp BCTTTCCBCBTT-------BCCEECTTTCCEE
T ss_pred cccCcCCcccCc-------cccccCCCCCCEE
Confidence 677777766521 3344566666666
No 453
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=35.72 E-value=20 Score=28.60 Aligned_cols=82 Identities=18% Similarity=0.325 Sum_probs=49.9
Q ss_pred ceee--ccccccccChHHHHHHHhhhcCCCCCC-ccccCcccCCChHHHHhccCCCCCCCCCCccccccccccccccccC
Q 018586 14 RHKC--VACYKQFKRKDHLIEHMKISYHSVHQP-KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMNIFDS 90 (353)
Q Consensus 14 ~~~C--~~C~k~f~~~~~l~~H~~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k~F~~ 90 (353)
...| ..|+..... ..+..|... =...+ .|..|+..+ ....+..|... .| +.+ ...|+.|+..+..
T Consensus 82 ~v~C~n~GC~~~~~~-~~l~~H~~~---C~~~~v~C~~C~~~~-~r~~l~~H~~~--~C---~~r--~~~C~~C~~~~~~ 149 (170)
T 3hcs_A 82 MVKCPNEGCLHKMEL-RHLEDHQAH---CEFALMDCPQCQRPF-QKFHINIHILK--DC---PRR--QVSCDNCAASMAF 149 (170)
T ss_dssp EEECCSTTCCCEEEG-GGHHHHHTT---CTTSEEECTTTCCEE-EGGGHHHHHHH--TC---TTC--EEECTTTCCEEEG
T ss_pred ccCCCCCCCCceecH-hHHHHHHhc---CCceeeECCCCChHH-HHHHHHHHhhh--hC---CCC--CeECCCCCCccCH
Confidence 4557 467776654 557788743 23345 899999877 55678888621 12 111 1248888887654
Q ss_pred chhHHHHHHHhcCCCCCC
Q 018586 91 PSSLIKHKEACSLSAPVP 108 (353)
Q Consensus 91 ~s~L~~H~~~h~~~k~~~ 108 (353)
..|..|...++|+.++.
T Consensus 150 -~~l~~H~~~~~~~~~~~ 166 (170)
T 3hcs_A 150 -EDKEIHDQNCPLALEHH 166 (170)
T ss_dssp -GGHHHHHTTCCC-----
T ss_pred -HHHHhHHHhCcChhhhh
Confidence 57899999999987764
No 454
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.16 E-value=29 Score=24.68 Aligned_cols=46 Identities=7% Similarity=0.092 Sum_probs=33.8
Q ss_pred CCCCCCCCccccccccc-cccccccCchhHHHHHHHh-cCCCCCCcccC
Q 018586 66 PLSKAHCSGIFSDRGCN-LCMNIFDSPSSLIKHKEAC-SLSAPVPFEKT 112 (353)
Q Consensus 66 ~~~c~~Cgk~f~~~~C~-~C~k~F~~~s~L~~H~~~h-~~~k~~~c~~~ 112 (353)
.+.|++|...|..+..- .||.+|.... +..+...+ .....+.||.+
T Consensus 7 ~~~CPI~~~~~~dPV~~~~cGh~f~r~c-I~~~l~~~~~~~~~~~CP~t 54 (94)
T 2yu4_A 7 GFTCPITKEEMKKPVKNKVCGHTYEEDA-IVRMIESRQKRKKKAYCPQI 54 (94)
T ss_dssp CCBCTTTCSBCSSEEEESSSCCEEEHHH-HHHHHHHHHTTTCCBCCCST
T ss_pred EeECcCcCchhcCCEEcCCCCCeecHHH-HHHHHHHccCcCCCCCCCcC
Confidence 56799999999998776 5999998654 55566654 33457788883
No 455
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=34.39 E-value=15 Score=26.42 Aligned_cols=26 Identities=15% Similarity=0.323 Sum_probs=14.7
Q ss_pred CCCCCCCCCccccc------cccccccccccC
Q 018586 65 GPLSKAHCSGIFSD------RGCNLCMNIFDS 90 (353)
Q Consensus 65 ~~~~c~~Cgk~f~~------~~C~~C~k~F~~ 90 (353)
..|.|+.||+.-.. +.|..|++.|..
T Consensus 35 ~ky~CpfCgk~~vkR~a~GIW~C~~Cg~~~AG 66 (92)
T 3iz5_m 35 SKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAG 66 (92)
T ss_dssp SCBCCTTTCSSCBEEEETTEEECSSSCCEEEC
T ss_pred ccccCcccCCCeeEecCcceEEcCCCCCEEeC
Confidence 45666666654221 137777776654
No 456
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=34.28 E-value=16 Score=26.26 Aligned_cols=26 Identities=12% Similarity=0.296 Sum_probs=15.1
Q ss_pred CCCCCCCCCccccc------cccccccccccC
Q 018586 65 GPLSKAHCSGIFSD------RGCNLCMNIFDS 90 (353)
Q Consensus 65 ~~~~c~~Cgk~f~~------~~C~~C~k~F~~ 90 (353)
..|.|+.||+.-.. +.|..|++.|..
T Consensus 35 ~ky~CpfCgk~~vkR~a~GIW~C~~C~~~~AG 66 (92)
T 3izc_m 35 ARYDCSFCGKKTVKRGAAGIWTCSCCKKTVAG 66 (92)
T ss_dssp SCCCCSSSCSSCCEEEETTEEECTTTCCEEEC
T ss_pred cCCcCCCCCCceeeecccceEEcCCCCCEEeC
Confidence 45667777654221 147777777654
No 457
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=32.95 E-value=15 Score=27.99 Aligned_cols=25 Identities=24% Similarity=0.430 Sum_probs=13.0
Q ss_pred ccccCcccCCChHHHHhccCCCCCCCCCCccc
Q 018586 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f 76 (353)
.|..|+..|... .+.+-|..||+.|
T Consensus 71 ~C~~C~~~Fs~~-------~RrHHCR~CG~vf 95 (125)
T 1joc_A 71 NCMACGKGFSVT-------VRRHHCRQCGNIF 95 (125)
T ss_dssp BCTTTCCBCCSS-------SCCEECTTTCCEE
T ss_pred CCcCcCCccccc-------cccccCCCCCeEE
Confidence 566666655421 2334466666555
No 458
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=32.38 E-value=27 Score=23.95 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=13.6
Q ss_pred cccccccccCchhHHHH
Q 018586 81 CNLCMNIFDSPSSLIKH 97 (353)
Q Consensus 81 C~~C~k~F~~~s~L~~H 97 (353)
|+.||..+......++-
T Consensus 39 C~~CGE~~~~~e~~~~~ 55 (78)
T 3ga8_A 39 CVHCEESIMNKEESDAF 55 (78)
T ss_dssp ETTTCCEECCHHHHHHH
T ss_pred CCCCCCEEECHHHHHHH
Confidence 99999998887766654
No 459
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=32.14 E-value=18 Score=25.34 Aligned_cols=25 Identities=12% Similarity=0.274 Sum_probs=13.7
Q ss_pred ccccCcccCCChHHHHhccCCCCCCCCCCccc
Q 018586 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f 76 (353)
.|..|+..|... .+.+-|..||+.|
T Consensus 23 ~C~~C~~~Fs~~-------~RrHHCR~CG~v~ 47 (84)
T 1z2q_A 23 ACNGCGCVFTTT-------VRRHHCRNCGYVL 47 (84)
T ss_dssp BCTTTCCBCCTT-------SCCEECTTTCCEE
T ss_pred CCcCcCCccccc-------hhcccccCCCcEE
Confidence 566666666531 2344466666665
No 460
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=32.08 E-value=18 Score=27.52 Aligned_cols=25 Identities=16% Similarity=0.320 Sum_probs=14.6
Q ss_pred ccccCcccCCChHHHHhccCCCCCCCCCCccc
Q 018586 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f 76 (353)
.|..|+..|... .+.+-|..||+.|
T Consensus 21 ~C~~C~~~Fs~~-------~RkHHCR~CG~if 45 (120)
T 1y02_A 21 SCKSCGAHFANT-------ARKQTCLDCKKNF 45 (120)
T ss_dssp CCTTTCCCCSSG-------GGCEECTTTCCEE
T ss_pred cccCcCCccccc-------cccccCCCCCCee
Confidence 677777776542 1234466666666
No 461
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=31.75 E-value=20 Score=23.56 Aligned_cols=20 Identities=15% Similarity=0.208 Sum_probs=12.8
Q ss_pred CCCCCCcccccccccccccc
Q 018586 68 SKAHCSGIFSDRGCNLCMNI 87 (353)
Q Consensus 68 ~c~~Cgk~f~~~~C~~C~k~ 87 (353)
.|..||.-.....|+.||..
T Consensus 8 ~C~~CgvYTLk~~CP~CG~~ 27 (60)
T 2apo_B 8 KCPKCGLYTLKEICPKCGEK 27 (60)
T ss_dssp ECTTTCCEESSSBCSSSCSB
T ss_pred eCCCCCCEeccccCcCCCCc
Confidence 36667655555567777754
No 462
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=30.25 E-value=19 Score=36.74 Aligned_cols=42 Identities=19% Similarity=0.135 Sum_probs=25.0
Q ss_pred CCCCCCccccccccccccccccCchhHHHHHHH--h----------cCCCCCCcccCCcc
Q 018586 68 SKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEA--C----------SLSAPVPFEKTLSN 115 (353)
Q Consensus 68 ~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~--h----------~~~k~~~c~~~~~~ 115 (353)
.|..|+|+| |+--+. +..|++..|... | -|+...+|-.|++.
T Consensus 22 ~~~~~~~~f----cn~~~~--~~~shi~~h~~~~~~~~~~~~~~~~~~~~~~ec~~c~~~ 75 (800)
T 2wjy_A 22 YCNTSKKWF----CNGRGN--TSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCR 75 (800)
T ss_dssp EETTTTEEE----ESCCTT--SSSCHHHHHHHHHTCCCEEECTTSTTCSCBCCCTTTCCC
T ss_pred EcCCCCCcc----ccCCCC--CcccHHHHHHHHccCceEecCCCCCCCCceEEEeccCCC
Confidence 466666666 332222 356788888443 2 25567788888754
No 463
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.20 E-value=22 Score=24.86 Aligned_cols=25 Identities=20% Similarity=0.441 Sum_probs=14.6
Q ss_pred ccccCcccCCChHHHHhccCCCCCCCCCCccc
Q 018586 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f 76 (353)
.|..|+..|... .+.+-|..||+.|
T Consensus 16 ~C~~C~~~F~~~-------~RrHHCR~CG~vf 40 (84)
T 1x4u_A 16 NCTGCSATFSVL-------KKRRSCSNCGNSF 40 (84)
T ss_dssp SCSSSCCCCCSS-------SCCEECSSSCCEE
T ss_pred cCcCcCCccccc-------hhhhhhcCCCcEE
Confidence 666777666431 2344566666666
No 464
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=27.05 E-value=29 Score=22.70 Aligned_cols=30 Identities=17% Similarity=0.255 Sum_probs=22.8
Q ss_pred CCCCCCc---cccccccccccccccCchhHHHH
Q 018586 68 SKAHCSG---IFSDRGCNLCMNIFDSPSSLIKH 97 (353)
Q Consensus 68 ~c~~Cgk---~f~~~~C~~C~k~F~~~s~L~~H 97 (353)
.|.+|+. ......|+.|+..|.+-.=.+.|
T Consensus 13 ~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~H 45 (59)
T 1x4s_A 13 PCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTH 45 (59)
T ss_dssp EECSSCTTCCEEECEECTTTCCEESSHHHHHHH
T ss_pred cCcCCCCCcCCCccccCcCCCCCccChHHHHHH
Confidence 4788875 56666899999988887766655
No 465
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=26.44 E-value=15 Score=26.93 Aligned_cols=26 Identities=15% Similarity=0.413 Sum_probs=14.9
Q ss_pred CCCCCCCCCccccc------cccccccccccC
Q 018586 65 GPLSKAHCSGIFSD------RGCNLCMNIFDS 90 (353)
Q Consensus 65 ~~~~c~~Cgk~f~~------~~C~~C~k~F~~ 90 (353)
..|.|+.||+.-.. +.|..|++.|..
T Consensus 35 aky~CpfCgk~~vKR~a~GIW~C~kCg~~~AG 66 (103)
T 4a17_Y 35 AKYGCPFCGKVAVKRAAVGIWKCKPCKKIIAG 66 (103)
T ss_dssp SCEECTTTCCEEEEEEETTEEEETTTTEEEEC
T ss_pred cCCCCCCCCCceeeecCcceEEcCCCCCEEeC
Confidence 45667777654222 247777776654
No 466
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=26.24 E-value=23 Score=25.15 Aligned_cols=31 Identities=26% Similarity=0.629 Sum_probs=19.5
Q ss_pred ccccCcccCCChHHHHhccCCCCCCCCCCccccccccccccc
Q 018586 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIFSDRGCNLCMN 86 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f~~~~C~~C~k 86 (353)
.|..|+..|... .+.+-|..||+.| |..|-.
T Consensus 11 ~C~~C~~~F~~~-------~RrHHCR~CG~vf----C~~Cs~ 41 (88)
T 1wfk_A 11 RCYGCAVKFTLF-------KKEYGCKNCGRAF----CNGCLS 41 (88)
T ss_dssp BCTTTCCBCCSS-------SCEEECSSSCCEE----ETTTSC
T ss_pred CCcCcCCcccCc-------cccccCCCCCCEE----ChhHcC
Confidence 788888777642 2344577777776 444543
No 467
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=25.60 E-value=17 Score=24.75 Aligned_cols=6 Identities=33% Similarity=0.944 Sum_probs=3.3
Q ss_pred ccccccc
Q 018586 81 CNLCMNI 87 (353)
Q Consensus 81 C~~C~k~ 87 (353)
|+ ||+.
T Consensus 24 C~-CG~~ 29 (71)
T 1gh9_A 24 CV-CGRT 29 (71)
T ss_dssp ET-TTEE
T ss_pred CC-CCCe
Confidence 65 6654
No 468
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=25.42 E-value=98 Score=22.52 Aligned_cols=22 Identities=18% Similarity=0.158 Sum_probs=18.1
Q ss_pred ccccccccCchhHHHHHHH-hcC
Q 018586 82 NLCMNIFDSPSSLIKHKEA-CSL 103 (353)
Q Consensus 82 ~~C~k~F~~~s~L~~H~~~-h~~ 103 (353)
+.|.|+|.+..+|+.|... |..
T Consensus 65 ~~CkrtyLs~rdlqaHI~~~H~~ 87 (101)
T 3vk6_A 65 QGCKRTYLSQRDLQAHINHRHMR 87 (101)
T ss_dssp CCCCCCCSSHHHHHHHHHHHTTT
T ss_pred CCHHHHhcCHHHHHHHHHHHhhh
Confidence 4699999999999999874 543
No 469
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=25.04 E-value=33 Score=25.74 Aligned_cols=24 Identities=25% Similarity=0.443 Sum_probs=15.9
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCC-CcccCCcc
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPV-PFEKTLSN 115 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~-~c~~~~~~ 115 (353)
.|..||..|.-. +.++ .||.|+..
T Consensus 75 ~C~~CG~~~e~~------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 75 ECKDCSHVFKPN------------ALDYGVCEKCHSK 99 (119)
T ss_dssp ECSSSSCEECSC------------CSTTCCCSSSSSC
T ss_pred EcCCCCCEEeCC------------CCCCCcCccccCC
Confidence 477888777652 3467 78888443
No 470
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=24.98 E-value=26 Score=29.48 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=13.2
Q ss_pred CCCCCCcccccc----ccccccccccCc
Q 018586 68 SKAHCSGIFSDR----GCNLCMNIFDSP 91 (353)
Q Consensus 68 ~c~~Cgk~f~~~----~C~~C~k~F~~~ 91 (353)
.|..|++.|+.. -|..||+.|...
T Consensus 163 ~C~~C~~~F~~~~rrhhCr~CG~v~C~~ 190 (220)
T 1dvp_A 163 VCHRCRVEFTFTNRKHHCRNCGQVFCGQ 190 (220)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECST
T ss_pred ccCCCCCccCCcccccccCCcCCEEChH
Confidence 366666666532 266666666553
No 471
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=24.17 E-value=28 Score=24.74 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=15.8
Q ss_pred ccccCcccCCChHHHHhccCCCCCCCCCCccc
Q 018586 45 KCAVCQKLSKSFESLREHLTGPLSKAHCSGIF 76 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~~~~~~c~~Cgk~f 76 (353)
.|..|+..|... .+.+-|..||+.|
T Consensus 22 ~C~~C~~~F~~~-------~RrhhCr~CG~v~ 46 (90)
T 3t7l_A 22 NCMNCQVKFTFT-------KRRHHCRACGKVF 46 (90)
T ss_dssp BCTTTCCBCCSS-------SCCEECTTTCCEE
T ss_pred cCcCCCCcccch-------hhCccccCCCCEE
Confidence 577777777531 3345577777776
No 472
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=23.55 E-value=30 Score=29.29 Aligned_cols=24 Identities=25% Similarity=0.440 Sum_probs=14.1
Q ss_pred CCCCCCcccccc----ccccccccccCc
Q 018586 68 SKAHCSGIFSDR----GCNLCMNIFDSP 91 (353)
Q Consensus 68 ~c~~Cgk~f~~~----~C~~C~k~F~~~ 91 (353)
.|..|++.|+.. -|..||+.|...
T Consensus 166 ~C~~C~~~F~~~~RrhHCR~CG~v~C~~ 193 (226)
T 3zyq_A 166 ECHRCRVQFGVMTRKHHCRACGQIFCGK 193 (226)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECTT
T ss_pred CCcCcCCCCCccccccccCCCcCEeChh
Confidence 366666666532 266666666554
No 473
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=22.67 E-value=91 Score=20.75 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=8.1
Q ss_pred ccccCcccCCChHHHHhcc
Q 018586 45 KCAVCQKLSKSFESLREHL 63 (353)
Q Consensus 45 ~C~~C~~~f~~~~~l~~H~ 63 (353)
.|..|+..+.. ..+..|.
T Consensus 46 ~C~~C~~~~~~-~~l~~H~ 63 (76)
T 2yuc_A 46 KCEFCGCDFSG-EAYESHE 63 (76)
T ss_dssp CCSSSCCCCCH-HHHHHTT
T ss_pred ECCCCCCccCH-HHHHHHH
Confidence 55555544432 3344443
No 474
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=22.51 E-value=20 Score=28.92 Aligned_cols=11 Identities=18% Similarity=-0.046 Sum_probs=5.8
Q ss_pred CCCCCcccCCc
Q 018586 104 SAPVPFEKTLS 114 (353)
Q Consensus 104 ~k~~~c~~~~~ 114 (353)
+.|-.||-|+.
T Consensus 151 ~~p~~CP~Cg~ 161 (170)
T 3pwf_A 151 EAPEYCPVCGA 161 (170)
T ss_dssp CCCSBCTTTCC
T ss_pred CCCCCCCCCCC
Confidence 34455666653
No 475
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=21.56 E-value=43 Score=20.65 Aligned_cols=10 Identities=20% Similarity=0.757 Sum_probs=5.7
Q ss_pred cccccccccC
Q 018586 81 CNLCMNIFDS 90 (353)
Q Consensus 81 C~~C~k~F~~ 90 (353)
|..||..|..
T Consensus 27 C~~CG~v~~e 36 (50)
T 1pft_A 27 CAKCGYVIEE 36 (50)
T ss_dssp ESSSCCBCCC
T ss_pred CcccCCcccc
Confidence 6666665543
No 476
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=21.36 E-value=39 Score=23.57 Aligned_cols=14 Identities=21% Similarity=0.501 Sum_probs=9.6
Q ss_pred CceeeccccccccC
Q 018586 13 ARHKCVACYKQFKR 26 (353)
Q Consensus 13 k~~~C~~C~k~f~~ 26 (353)
++.+|..||.-|.-
T Consensus 55 ~~~RC~eCG~~fkL 68 (80)
T 2odx_A 55 EVARCWECGSVYKL 68 (80)
T ss_dssp CEEECSSSCCEEEE
T ss_pred CCeECCCCCeEEEE
Confidence 67777777766653
No 477
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=21.14 E-value=40 Score=28.06 Aligned_cols=23 Identities=22% Similarity=0.288 Sum_probs=19.6
Q ss_pred ccccccccccC-chhHHHHHHHhc
Q 018586 80 GCNLCMNIFDS-PSSLIKHKEACS 102 (353)
Q Consensus 80 ~C~~C~k~F~~-~s~L~~H~~~h~ 102 (353)
.|..|++.|.. -..|+.|...|-
T Consensus 171 ~C~~C~~~f~n~~~~LK~HL~~e~ 194 (204)
T 3sp4_A 171 KCWRCGETFGRHFTKLKAHLQEEY 194 (204)
T ss_dssp BCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred eeCCCCchhhcccHHHHHHHHHHH
Confidence 49999999976 899999988764
No 478
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=20.82 E-value=28 Score=27.06 Aligned_cols=10 Identities=20% Similarity=-0.041 Sum_probs=7.3
Q ss_pred CCCcccCCcc
Q 018586 106 PVPFEKTLSN 115 (353)
Q Consensus 106 ~~~c~~~~~~ 115 (353)
+..||.|++.
T Consensus 107 ~~~CP~Cgs~ 116 (139)
T 3a43_A 107 FLACPKCGSH 116 (139)
T ss_dssp GCSCSSSSCC
T ss_pred CCcCccccCC
Confidence 5778888654
No 479
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=20.80 E-value=83 Score=21.71 Aligned_cols=44 Identities=7% Similarity=-0.010 Sum_probs=32.2
Q ss_pred CCCCCCCCccccccccccccccccCchhHHHHHHHhcCCCCCCcccCCcc
Q 018586 66 PLSKAHCSGIFSDRGCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSN 115 (353)
Q Consensus 66 ~~~c~~Cgk~f~~~~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~ 115 (353)
.+.|+.|...|..+..-.||.+|... .+..+... ...||.|+..
T Consensus 14 ~~~CpI~~~~m~dPV~~~cGhtf~r~-~I~~~l~~-----~~~cP~~~~~ 57 (85)
T 2kr4_A 14 EFRDPLMDTLMTDPVRLPSGTVMDRS-IILRHLLN-----SPTDPFNRQM 57 (85)
T ss_dssp TTBCTTTCSBCSSEEECTTSCEEEHH-HHHHHHHH-----CSBCTTTCCB
T ss_pred heECcccCchhcCCeECCCCCEECHH-HHHHHHhc-----CCCCCCCcCC
Confidence 56799999999988766699988764 55667653 2578887544
No 480
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=20.76 E-value=35 Score=22.34 Aligned_cols=20 Identities=15% Similarity=0.386 Sum_probs=12.4
Q ss_pred CCCCCCcccccccccccccc
Q 018586 68 SKAHCSGIFSDRGCNLCMNI 87 (353)
Q Consensus 68 ~c~~Cgk~f~~~~C~~C~k~ 87 (353)
.|..||.-.....|+.||..
T Consensus 7 ~C~~Cg~YTLk~~CP~CG~~ 26 (60)
T 2aus_D 7 KCPKCGRYTLKETCPVCGEK 26 (60)
T ss_dssp ECTTTCCEESSSBCTTTCSB
T ss_pred ECCCCCCEEccccCcCCCCc
Confidence 46667655555567777753
No 481
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=20.50 E-value=20 Score=29.49 Aligned_cols=10 Identities=20% Similarity=0.076 Sum_probs=5.3
Q ss_pred CCCCcccCCc
Q 018586 105 APVPFEKTLS 114 (353)
Q Consensus 105 k~~~c~~~~~ 114 (353)
.|-.||-|+.
T Consensus 170 ~p~~CP~C~~ 179 (191)
T 1lko_A 170 APELCPACAH 179 (191)
T ss_dssp CCSBCTTTCC
T ss_pred CCCCCCCCcC
Confidence 3445666654
No 482
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=20.23 E-value=20 Score=35.57 Aligned_cols=31 Identities=19% Similarity=0.281 Sum_probs=22.6
Q ss_pred ccccccccccCchhHHHHHHHhcCCCCCCcccCCcch
Q 018586 80 GCNLCMNIFDSPSSLIKHKEACSLSAPVPFEKTLSNA 116 (353)
Q Consensus 80 ~C~~C~k~F~~~s~L~~H~~~h~~~k~~~c~~~~~~~ 116 (353)
.|+.|.+.|.++.+.+.| ..|..|+.|+..-
T Consensus 69 mC~~C~~EY~dp~dRRfH------Aqp~aCp~CGP~l 99 (657)
T 3ttc_A 69 LCPACDKEYRDPLDRRFH------AQPVACPECGPYL 99 (657)
T ss_dssp CCHHHHHHHHCTTSTTTT------CTTCCCTTTSCCE
T ss_pred CChHHHHHhCCCCCCcCc------CCCCcCcccCccc
Confidence 399999999888774433 3577888888653
Done!