BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018587
(353 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255578426|ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical protein [Ricinus communis]
Length = 362
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/370 (69%), Positives = 295/370 (79%), Gaps = 25/370 (6%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MD+DDFRSIL+++GVDVWTFIDTAI+VASLD+ ELK+RRDKIVE LY++ + RCRNCD
Sbjct: 1 MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSS--SGRCRNCD 58
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTP----HSVNGDDDIDIENDNDI-------I 109
G ++ EI H E K +P S++GD+D+D+ ND+D +
Sbjct: 59 LDVGRINNGHEIKERSHLESKGGGGGGSGSPSTTPRSIHGDEDVDVVNDDDDDDDDDDGL 118
Query: 110 DPYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQL 169
DPY GLFDDEQK+ILEIK+HLEDPDQSED+L+DLLQSLADMDITFKALKETDIGRHVNQL
Sbjct: 119 DPYAGLFDDEQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKETDIGRHVNQL 178
Query: 170 RKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQKIPQNGNHQVP 228
RKH+SNDVR+LVK LVRKWKDIVDEWVKLN PG+ ASS +M DGDSP+QK PQNG+HQVP
Sbjct: 179 RKHTSNDVRRLVKQLVRKWKDIVDEWVKLNPPGQHASSGLMADGDSPRQKFPQNGHHQVP 238
Query: 229 DFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASP---AAPHSVQRPR 285
DFAYSPNPHNGSSGSDKNNSEPER+ K P+PRKEA RP Q + P +A H VQR R
Sbjct: 239 DFAYSPNPHNGSSGSDKNNSEPERRPK--PVPRKEA-PPRPAQQSVPVSASASHIVQRQR 295
Query: 286 EQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKP--KNAFFGKN 343
EQ+ RE+ FD+D RLASARKRLQ NYK ENAK+QRTIQVMDIHE+PKP KN FF KN
Sbjct: 296 EQQ--RENNFDSD-RLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNKNTFFAKN 352
Query: 344 KGGSSQGRHW 353
KGG SQGRHW
Sbjct: 353 KGGGSQGRHW 362
>gi|449448454|ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
Length = 345
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/363 (67%), Positives = 278/363 (76%), Gaps = 31/363 (8%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYA-TCIASRCRNC 59
+DLDDFR+IL TAGVDVWTFIDTA+ VASLDY +LK RRD IVERLYA T SRCRNC
Sbjct: 4 LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNC 63
Query: 60 DF-------GNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPY 112
D NG EI +G EVK +ASPSTP V +E D+D DPY
Sbjct: 64 DTDRNHDGRSNGC-----EIKQGS-GEVK---EASPSTPQFVV------VEGDDDGADPY 108
Query: 113 GGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
GLFDDEQK++LEIKE LE P Q EDAL++LLQ+LADMDITF+ALKETDIGRHVN+LRKH
Sbjct: 109 AGLFDDEQKKVLEIKEQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKH 168
Query: 173 SSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAY 232
SNDVR+LVKHLVRKWK+IVDEWV+LNQPGE ++ + DGDSPQQK PQNG HQVPDFAY
Sbjct: 169 PSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTATLLADGDSPQQKAPQNGYHQVPDFAY 228
Query: 233 SPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRE 292
SPNPHNG SGSD+NNSEPE K K +PR++AL +P Q A ++ R +EQ+ +E
Sbjct: 229 SPNPHNGGSGSDRNNSEPEPKGKS--VPRRDAL-PKPTQQAPTSSLTPQNRQKEQQ--KE 283
Query: 293 STFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNK--GGSSQG 350
+ FD+ +LASARKRLQENYK ENAKRQRTIQVMDIHEIPKPKNAFF KNK GG SQG
Sbjct: 284 ANFDS-QKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQG 342
Query: 351 RHW 353
RHW
Sbjct: 343 RHW 345
>gi|224060453|ref|XP_002300207.1| predicted protein [Populus trichocarpa]
gi|222847465|gb|EEE85012.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/370 (65%), Positives = 285/370 (77%), Gaps = 26/370 (7%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYA-TCIASRCRNC 59
MD+DDFRSIL+++GVDVW FIDTAI VASLD+ +ELK RRD IV RL+A + SRCR+
Sbjct: 1 MDIDDFRSILESSGVDVWNFIDTAIDVASLDFGSELKRRRDDIVARLFAASSSCSRCRDR 60
Query: 60 DF----------GNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDII 109
F GNG+ D+ ++ S + ++ + SP TP SVNGD D++ +
Sbjct: 61 SFDDIDINNTANGNGMKDLAEKESSHEEEKGRRVYADSPVTPRSVNGD------GDDEEL 114
Query: 110 DPYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQL 169
DP+GGLFDDE K+IL+IK+ LED DQ ED+L+DLLQSLADMDITF+ALKETDIGRHVN+L
Sbjct: 115 DPFGGLFDDEPKKILDIKQQLEDLDQPEDSLVDLLQSLADMDITFQALKETDIGRHVNRL 174
Query: 170 RKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMD-GDSPQQKIPQNGNHQVP 228
RKH SNDV++LVK LVRKWK+IVD+WV+LN GE ASS +M GDSPQQKIPQNG HQVP
Sbjct: 175 RKHPSNDVKRLVKQLVRKWKEIVDDWVRLNPHGERASSGLMAYGDSPQQKIPQNGRHQVP 234
Query: 229 DFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQS--ASPAAPHSVQRPRE 286
DFAYSPNPHNGSSGSD+NNSEPERK K AP PR EAL+ +S AS +APH+VQR RE
Sbjct: 235 DFAYSPNPHNGSSGSDRNNSEPERKPKLAP-PRNEALTKPIKKSVPASSSAPHNVQRQRE 293
Query: 287 QKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKP--KNAFFGKNK 344
Q +E+ FDAD + ASA KRLQ NYK ENAK+QRTIQVMDIHEIPKP KN FF KN+
Sbjct: 294 Q--PKENKFDADQKFASASKRLQANYKEAENAKKQRTIQVMDIHEIPKPKNKNTFFAKNR 351
Query: 345 GGSS-QGRHW 353
GG S QGRHW
Sbjct: 352 GGGSHQGRHW 361
>gi|224126771|ref|XP_002329469.1| predicted protein [Populus trichocarpa]
gi|222870149|gb|EEF07280.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/375 (63%), Positives = 274/375 (73%), Gaps = 40/375 (10%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCI-------- 52
MD+DDFR IL+++GVDVWTFIDTAI+VASLD+ +ELK RRD IVERL+A+
Sbjct: 1 MDIDDFRLILESSGVDVWTFIDTAIVVASLDFGSELKRRRDDIVERLFASSSSCSRCRDR 60
Query: 53 ------ASRCRNCDFGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDN 106
+ N D G+V+ + V A SP TP SVNGD D+
Sbjct: 61 SLNDINMNNTSNGDEIKGLVEKESSHEEEKGTRVAAD---SPVTPRSVNGD------GDD 111
Query: 107 DIIDPYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHV 166
D +DPYGGLFDDE K+IL IK+ LED DQ ED+L+DLLQSLADMDITF+ALKETDIGRHV
Sbjct: 112 DELDPYGGLFDDEPKKILVIKQQLEDIDQPEDSLVDLLQSLADMDITFQALKETDIGRHV 171
Query: 167 NQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQKIPQNGNH 225
N+LRKH SNDVR+LVK LVRKWK+IVD+WV+LN GE ASS +M DGDSPQQKIPQNG+H
Sbjct: 172 NRLRKHPSNDVRRLVKQLVRKWKEIVDDWVRLNPQGEHASSGLMADGDSPQQKIPQNGHH 231
Query: 226 QVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPA---APHSVQ 282
QVPDFAYSPNPHNGSSGSD+NNSEPERK K AP PR +A ++P Q PA AP++VQ
Sbjct: 232 QVPDFAYSPNPHNGSSGSDRNNSEPERKPKPAP-PRNQA-PTKPTQKPVPASSPAPYNVQ 289
Query: 283 RPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKP--KNAFF 340
S+FDAD RLASA KRLQ NYK ENAK+QRTIQVMDIHEIPKP KN FF
Sbjct: 290 -------VSTSSFDADQRLASASKRLQANYKEAENAKKQRTIQVMDIHEIPKPKNKNTFF 342
Query: 341 GKNK--GGSSQGRHW 353
KN+ GGS QGRHW
Sbjct: 343 PKNRGAGGSHQGRHW 357
>gi|356525574|ref|XP_003531399.1| PREDICTED: uncharacterized protein LOC100796457 [Glycine max]
Length = 314
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/354 (61%), Positives = 254/354 (71%), Gaps = 41/354 (11%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYA-TCIASRCRNC 59
MD +DFRSIL++AGVDVW +D AI VAS D+A ELK RRD IVERLYA + CRNC
Sbjct: 1 MDSEDFRSILESAGVDVWALMDAAIAVASADHAHELKRRRDGIVERLYAASSPPPLCRNC 60
Query: 60 DFGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDE 119
D G+G E++ Q+SPS + DPYGGLFDDE
Sbjct: 61 DAGDG-------------GEIRT--QSSPSA---------------EEEKDPYGGLFDDE 90
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
Q++IL+IKE LEDP QSED+L++LLQ+LADMDITF+AL+ETDIGRHVN+LRKHSSNDV++
Sbjct: 91 QRKILDIKEQLEDPHQSEDSLVELLQNLADMDITFQALEETDIGRHVNRLRKHSSNDVKR 150
Query: 180 LVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNG 239
LVK LVRKWK+IVDEWVKL PGE ++ M D DSPQQ+I QNG+ Q+PDFAYSPNPH G
Sbjct: 151 LVKLLVRKWKEIVDEWVKLKAPGEPGTAVMADEDSPQQRILQNGHRQIPDFAYSPNPHYG 210
Query: 240 SSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADS 299
S GS++NN E ERK K +PRKEA S P +PA P Q RES FD D
Sbjct: 211 SFGSERNNIEAERKPKA--IPRKEAPSKPSPSVTTPAPP-------TQNRQRESNFDPD- 260
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRHW 353
R ASARKRLQENYK NAK+QRTIQVMD+HE+PKPKNAF GKNKGG+ QGRHW
Sbjct: 261 RFASARKRLQENYKDAANAKKQRTIQVMDLHELPKPKNAFLGKNKGGTGQGRHW 314
>gi|356512793|ref|XP_003525100.1| PREDICTED: uncharacterized protein LOC100820221 [Glycine max]
Length = 313
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/354 (59%), Positives = 247/354 (69%), Gaps = 42/354 (11%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MD +DFRSIL++AGVDVW +D AI VAS+D+ ELK RRD+IVERLYA+ +CRNCD
Sbjct: 1 MDSEDFRSILESAGVDVWALMDAAIAVASVDHPDELKRRRDRIVERLYASSALPQCRNCD 60
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQ 120
G + Q+SPS + DPYGG D+EQ
Sbjct: 61 PNAGEIRT----------------QSSPSA---------------EEEKDPYGGFMDEEQ 89
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
K+IL IKE LEDP QSED+L++LLQ+LADMDITF AL+E+DIGR+VN+LRKHSSNDV++L
Sbjct: 90 KKILYIKEQLEDPHQSEDSLVELLQNLADMDITFPALEESDIGRYVNRLRKHSSNDVKRL 149
Query: 181 VKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGS 240
VK LVRKWK+IVDEWVKL PG ++ M D DSPQQ+I QNG+ Q+PDFAYSPNPHNGS
Sbjct: 150 VKLLVRKWKEIVDEWVKLKSPGYPGTAVMADEDSPQQRILQNGHRQIPDFAYSPNPHNGS 209
Query: 241 SGSD-KNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADS 299
SGS +NN E ERK K +PRKEA P +PA+P Q RE FD D
Sbjct: 210 SGSSQRNNIEAERKPKA--IPRKEAPPKPSPSVTTPASP-------PQNRQREGNFDPD- 259
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRHW 353
R ASARKRLQENYK NAK+QRTIQVMD+HE+PKPKNAF GKNKGG+ QGRHW
Sbjct: 260 RFASARKRLQENYKEAANAKKQRTIQVMDLHELPKPKNAFLGKNKGGTGQGRHW 313
>gi|356516327|ref|XP_003526847.1| PREDICTED: uncharacterized protein LOC100804034 [Glycine max]
Length = 361
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/381 (61%), Positives = 268/381 (70%), Gaps = 48/381 (12%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIAS-RCRNC 59
MDLDDFRS+L TAGVDVW FID AI VAS D A ELK RRD IVERLYA A+ +CR C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 60 DFGNGVVDVNKEISRGQHDEVKAAQQASPS---TPHSVNGDDDI---------DIENDND 107
D G D+N + +Q+SPS PH +ENDND
Sbjct: 61 DDGGN--DLNGH---------QIKKQSSPSPERQPHQRRAAAIAAAASPATPQSLENDND 109
Query: 108 I---IDPYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGR 164
+DPYGGLFDDEQK+ILEIKE LE+PDQSED+L++LLQSLADMDITF+ALKETDIGR
Sbjct: 110 GEEDLDPYGGLFDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGR 169
Query: 165 HVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQ-QKIPQNG 223
HVN+LRKH SNDVR+LVK LVRKWK+IVDEWVKLN G +++ M DGDSP QK QNG
Sbjct: 170 HVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVKLNPQGR-SNTLMADGDSPPVQKTTQNG 228
Query: 224 NH----QVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPH 279
+H ++PDFAYSPNPHNGSSGSD+NNSE E K K +PR E +P S S + P
Sbjct: 229 HHHQQVEIPDFAYSPNPHNGSSGSDRNNSEAEHKPKV--VPRSEP-RPKPAPSPSVSTPA 285
Query: 280 SVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--- 336
S + R+ R+S FDA+ RLASAR+RLQENYK E AKRQRTIQVMDIHE+PK K
Sbjct: 286 SATQNRQ----RDSNFDAE-RLASARRRLQENYKEAEIAKRQRTIQVMDIHELPKSKPKN 340
Query: 337 NAFFGKNK----GGSSQGRHW 353
NAFFGKNK GG SQGRHW
Sbjct: 341 NAFFGKNKGGGGGGGSQGRHW 361
>gi|359476965|ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
vinifera]
Length = 331
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/354 (60%), Positives = 256/354 (72%), Gaps = 26/354 (7%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MD D+FR IL+ +GVDVW FI+TAI VA DY EL+ RRD IVER+Y ++SRC +C+
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY---MSSRCGSCN 57
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVN--GDDDIDIENDNDIIDPYGGLFDD 118
++K + DE + SP TP S+N G +D YGGL D+
Sbjct: 58 LRYQHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDR-----------YGGLLDE 106
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
E+ RIL+IKEHLE PDQ +D+++DLLQ+LADMDITFKALKETDIGRHVN+LRKH SNDVR
Sbjct: 107 EEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVR 166
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHN 238
+LVKHLVRKWKD+VDEWVK N GE SSA+M+GDSP QKIP+ G+HQVPDF YSPNP N
Sbjct: 167 RLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMEGDSPPQKIPRTGHHQVPDFGYSPNPQN 226
Query: 239 GSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDAD 298
GSSGSDKNN+EPE K K +PRKE + +RP QS AP S P K+ R++ D D
Sbjct: 227 GSSGSDKNNAEPEPKVKA--IPRKE-VPTRPAQS----APVSSSFPPPNKQ-RDTAIDPD 278
Query: 299 SRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRH 352
+ ASARKRL ENY+ +NAK+QRTIQVMDIH+IPKPKN FF K K G SQGRH
Sbjct: 279 -KFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVG-SQGRH 330
>gi|312281771|dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila]
Length = 348
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/365 (59%), Positives = 260/365 (71%), Gaps = 29/365 (7%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MDLDDFRSI+ AGVDVWTFIDTAILVASLDY ELK RRD IVERLYAT +A++CRNCD
Sbjct: 1 MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 61 FGNGVVDVNKEISR------GQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGG 114
FG+G + ++R + +E + SVNG +D+D DP+ G
Sbjct: 61 FGSGGIVTEAAVARVNGRIHEETEEEEGEAAEEEVREKSVNG-------DDDDDFDPFAG 113
Query: 115 LFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS 174
LFDDEQK ILEIKE LEDPD SE+AL++LLQ+L DMDITF+AL+ETDIGRHVN++RKH S
Sbjct: 114 LFDDEQKSILEIKERLEDPDLSEEALVELLQNLEDMDITFQALQETDIGRHVNRVRKHPS 173
Query: 175 NDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQKIPQNGN-HQVPDFAY 232
N+VR+L K LV+KWK+ VDEWVK NQPG+L +++ D DSPQQK NGN QVPDF Y
Sbjct: 174 NNVRRLAKQLVKKWKETVDEWVKFNQPGDLEPPSLIADEDSPQQKALHNGNRQQVPDFGY 233
Query: 233 SPNPHNGSSGSDKNN--SEPERKSKQ-APLPRKEALSSRPPQSASPAAPHSVQRPREQKE 289
SP P NG SGS KN+ +EPERK + AP R+E+ S P SP+ ++QR KE
Sbjct: 234 SPVPQNGYSGSSKNSNYAEPERKPRPIAPPTRRESPSPAKPSRPSPSQ-QTIQR---DKE 289
Query: 290 SRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQ 349
+E FD SARKRLQ+NY++ ENAK+QRTIQVMDIHEIPKPK F KGGSSQ
Sbjct: 290 HKEVDFD------SARKRLQQNYRQAENAKKQRTIQVMDIHEIPKPKKGGFFPRKGGSSQ 343
Query: 350 -GRHW 353
GRHW
Sbjct: 344 GGRHW 348
>gi|296088637|emb|CBI37628.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/355 (60%), Positives = 256/355 (72%), Gaps = 27/355 (7%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MD D+FR IL+ +GVDVW FI+TAI VA DY EL+ RRD IVER+Y ++SRC +C+
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY---MSSRCGSCN 57
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVN--GDDDIDIENDNDIIDPYGGLFDD 118
++K + DE + SP TP S+N G +D YGGL D+
Sbjct: 58 LRYQHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSEDR-----------YGGLLDE 106
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
E+ RIL+IKEHLE PDQ +D+++DLLQ+LADMDITFKALKETDIGRHVN+LRKH SNDVR
Sbjct: 107 EEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVR 166
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPDFAYSPNPH 237
+LVKHLVRKWKD+VDEWVK N GE SSA+M +GDSP QKIP+ G+HQVPDF YSPNP
Sbjct: 167 RLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPRTGHHQVPDFGYSPNPQ 226
Query: 238 NGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDA 297
NGSSGSDKNN+EPE K K +PRKE + +RP QS AP S P K+ R++ D
Sbjct: 227 NGSSGSDKNNAEPEPKVKA--IPRKE-VPTRPAQS----APVSSSFPPPNKQ-RDTAIDP 278
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRH 352
D + ASARKRL ENY+ +NAK+QRTIQVMDIH+IPKPKN FF K K G SQGRH
Sbjct: 279 D-KFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVG-SQGRH 331
>gi|18416107|ref|NP_568218.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26c
gi|332004072|gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 353
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/366 (57%), Positives = 260/366 (71%), Gaps = 26/366 (7%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MDLDDFRS++ AGVDVWTFIDTAILVASLDY ELK RRD IVERLYAT +A++CRNCD
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDI-----DIENDNDIIDPYGGL 115
FG G I R + V + + ++++ ++E+D+D DP+ GL
Sbjct: 61 FGGGGNVTEAAIGRVNNGRVHEETEEEDEEGVTAAAEEEVREKSVNVEDDDDF-DPFAGL 119
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
FDDEQK I+EIKE LEDPD SE++L++LLQ+L DMDITF+AL+ETDIGRHVN++RKH SN
Sbjct: 120 FDDEQKSIVEIKEKLEDPDLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSN 179
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQKIPQNGN-HQVPDFAYS 233
+VR+L K LV+KWK+ VDEWVK NQPG+L +++ D DSP QK NG+ QVPDF YS
Sbjct: 180 NVRRLAKQLVKKWKETVDEWVKFNQPGDLEPPSLIADEDSPVQKALHNGSRQQVPDFGYS 239
Query: 234 PNPHNGSSGSDKNN--SEPERKSKQ-APLPRKEALSSRPPQSASPAAPHSVQR--PREQK 288
P P NG S S KN+ +EPERK + AP PR+E+ P A P+ P Q+ PR+ K
Sbjct: 240 PVPQNGYSSSSKNSNITEPERKPRPVAPQPRRES-----PSPAKPSRPSPSQQTIPRD-K 293
Query: 289 ESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSS 348
E +E FD +ARKRLQ+NY++ ENAK+QRTIQVMDIH+IPKPK F KGGSS
Sbjct: 294 EHKEVDFD------TARKRLQQNYRQAENAKKQRTIQVMDIHDIPKPKKGGFFPRKGGSS 347
Query: 349 Q-GRHW 353
Q GRHW
Sbjct: 348 QGGRHW 353
>gi|356509008|ref|XP_003523244.1| PREDICTED: uncharacterized protein LOC100790582 [Glycine max]
Length = 356
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/368 (61%), Positives = 265/368 (72%), Gaps = 27/368 (7%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYA-TCIASRCRNC 59
MDLDDFRSIL TAGVDVW FID AI VAS D A +LK RRD IVERLYA T CRNC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 60 DFGNGVVDVNKEISRGQHDEV------KAAQQASPSTPHSVNGDDDIDIENDNDIIDPYG 113
D G ++ ++ + +H ++ ASP+TP S++ +D D + D D PYG
Sbjct: 61 DEGGHRLNGHRIKKQSRHSPSPERQPHRSTATASPATPQSLDNGEDEDNDEDLD---PYG 117
Query: 114 GLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
GL DDEQK+ILEIKE LE+PDQSED+L++LLQSLADMDITF+ LKETDIGRHVN+LRKH
Sbjct: 118 GLLDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQGLKETDIGRHVNRLRKHP 177
Query: 174 SNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGD-SPQQKIPQNGNH-QVPDFA 231
SND+R+LVK LVRKWK+IVDEWVKLN G +++ M DGD SP QK QNG+H Q+PDFA
Sbjct: 178 SNDLRRLVKLLVRKWKEIVDEWVKLNPRGG-SNTLMADGDSSPVQKTTQNGHHQQIPDFA 236
Query: 232 YSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESR 291
YSPNPHNGSSGSD+NNSE ERK K +PR E RP + SP+ S Q R
Sbjct: 237 YSPNPHNGSSGSDRNNSEAERKPKV--VPRSEP---RPKHAPSPSV--STPASATQNRQR 289
Query: 292 ESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK---NAFF---GKNKG 345
ES+FDA+ RLASAR+RLQENYK E AKRQRTIQVMDIH++PK K NAFF G
Sbjct: 290 ESSFDAE-RLASARRRLQENYKEAEIAKRQRTIQVMDIHDLPKAKPKNNAFFGKNKGGGG 348
Query: 346 GSSQGRHW 353
G SQGRHW
Sbjct: 349 GGSQGRHW 356
>gi|9758963|dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
Length = 361
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/374 (56%), Positives = 260/374 (69%), Gaps = 34/374 (9%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MDLDDFRS++ AGVDVWTFIDTAILVASLDY ELK RRD IVERLYAT +A++CRNCD
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDI-----DIENDNDIIDPYGGL 115
FG G I R + V + + ++++ ++E+D+D DP+ GL
Sbjct: 61 FGGGGNVTEAAIGRVNNGRVHEETEEEDEEGVTAAAEEEVREKSVNVEDDDDF-DPFAGL 119
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
FDDEQK I+EIKE LEDPD SE++L++LLQ+L DMDITF+AL+ETDIGRHVN++RKH SN
Sbjct: 120 FDDEQKSIVEIKEKLEDPDLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSN 179
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGEL---------ASSAMMDGDSPQQKIPQNGN-H 225
+VR+L K LV+KWK+ VDEWVK NQPG+L SS + D DSP QK NG+
Sbjct: 180 NVRRLAKQLVKKWKETVDEWVKFNQPGDLEPPSLIEQSISSNVADEDSPVQKALHNGSRQ 239
Query: 226 QVPDFAYSPNPHNGSSGSDKNN--SEPERKSKQ-APLPRKEALSSRPPQSASPAAPHSVQ 282
QVPDF YSP P NG S S KN+ +EPERK + AP PR+E+ P A P+ P Q
Sbjct: 240 QVPDFGYSPVPQNGYSSSSKNSNITEPERKPRPVAPQPRRES-----PSPAKPSRPSPSQ 294
Query: 283 R--PREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFF 340
+ PR+ KE +E FD +ARKRLQ+NY++ ENAK+QRTIQVMDIH+IPKPK F
Sbjct: 295 QTIPRD-KEHKEVDFD------TARKRLQQNYRQAENAKKQRTIQVMDIHDIPKPKKGGF 347
Query: 341 GKNKGGSSQ-GRHW 353
KGGSSQ GRHW
Sbjct: 348 FPRKGGSSQGGRHW 361
>gi|359493121|ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/362 (58%), Positives = 257/362 (70%), Gaps = 39/362 (10%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MD D+FRSIL+++GVDVWT I+TA+ VAS+DY+ E K RRD IVERLY T + SRC NCD
Sbjct: 1 MDCDEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLY-TPVVSRCLNCD 59
Query: 61 FG-----NGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGL 115
NG V +++ + Q ++ TP SV D D G
Sbjct: 60 RDRIHKPNGDRSVKEKMDQLQ-------DESWIETPESVERDRD--------------GS 98
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
D+EQ +IL IKE LEDPDQ ED+L+DLLQSLADMDITFKALKETDIGRHVN+LRKH SN
Sbjct: 99 IDEEQSKILAIKERLEDPDQLEDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKHPSN 158
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQ---KIPQNGNHQVPDFA 231
+VR+LVK LVRKWKD+VDEWVKL+ PGE +SA++ DGDSPQQ K N +HQVPDFA
Sbjct: 159 EVRRLVKQLVRKWKDLVDEWVKLSTPGETTASAIVADGDSPQQNHLKSTSNVHHQVPDFA 218
Query: 232 YSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESR 291
YSPNPHNGSSGSDKNN E E K K +PR+E ++P Q +P P SV +Q+E +
Sbjct: 219 YSPNPHNGSSGSDKNNVELEPKRKA--VPRRET-PNKPNQ--TPPIPTSVAL-NKQREQK 272
Query: 292 ESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGR 351
+S D + +LASAR+RL ENY+ +NAK+QRTIQVMDIH+IPKPKN FF KN+GG Q +
Sbjct: 273 DSLVD-EEKLASARRRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKNRGG-VQAK 330
Query: 352 HW 353
HW
Sbjct: 331 HW 332
>gi|357464497|ref|XP_003602530.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
gi|355491578|gb|AES72781.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
Length = 357
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/366 (59%), Positives = 260/366 (71%), Gaps = 22/366 (6%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIAS--RCRN 58
MDLDDFRSIL TAGVDVW FIDTAI VA+ D A ELK RRD IVERLYA C+N
Sbjct: 1 MDLDDFRSILHTAGVDVWMFIDTAISVAAQDNAGELKRRRDGIVERLYAASTEGIPMCQN 60
Query: 59 CDFGNGVVDVNKEISRGQHDEVKAAQQ------ASPSTPHSVNGDDDIDIENDNDIIDPY 112
CD G +V + +I + + +Q +SP TP S + + +++ IDPY
Sbjct: 61 CDGGQRLVTNDNQIKKENSPSLSPERQPRRGGASSPPTPQSEG-----NEDGEDEEIDPY 115
Query: 113 GGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
GGLFDDEQK+ILEIKE LEDP QSED L++LLQ+L D+DITF+ LKETDIGR+VNQLRKH
Sbjct: 116 GGLFDDEQKKILEIKELLEDPHQSEDTLMELLQNLVDIDITFQELKETDIGRNVNQLRKH 175
Query: 173 SSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNG-NHQVPDFA 231
S+DVR+LVK LV+KWK+IVD+WVK N P S+ M DGDSP QK NG NHQ+PDFA
Sbjct: 176 PSSDVRRLVKLLVKKWKEIVDDWVKQN-PQRGKSTLMADGDSPLQKTTPNGHNHQIPDFA 234
Query: 232 YSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESR 291
YSPNPHNGSSGSD+N SE E K K + ++ +P S AP S + R Q+E +
Sbjct: 235 YSPNPHNGSSGSDRNTSEAEPKPKPKSV-PRKDPPPKPRPSPPVTAPTSAPQNR-QREQK 292
Query: 292 ESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIP--KPKNAFFGKNK-GGSS 348
ES FDA+ RLA+ARKRLQ NYK +NAK+QRTIQVMDIHE+P K K+ +F K+K GGSS
Sbjct: 293 ESNFDAE-RLAAARKRLQANYKEADNAKKQRTIQVMDIHELPKSKAKSGYFAKHKGGGSS 351
Query: 349 QGR-HW 353
QGR HW
Sbjct: 352 QGRQHW 357
>gi|297811087|ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319264|gb|EFH49686.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/373 (56%), Positives = 255/373 (68%), Gaps = 29/373 (7%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MDLDDFRS++ AGVDVWTFIDTAILVASLDY ELK RRD IVERLYAT +A++CRNCD
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 61 FGNGVVDVNKEISRGQ---HDEVKAAQQASPSTPHSVNG--DDDIDIENDNDIIDPYGGL 115
FG G + R H+E + + + + + + +++E+D+D DP+ GL
Sbjct: 61 FGGGGSVTEAAVGRVNGRVHEETEEEDEEAAAAAAAAEEVREKSVNVEDDDDF-DPFAGL 119
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
FDDEQK ILEIKE LEDPD SE++L++LLQ+L DMDITF+AL+ETDIGRHVN++RKH SN
Sbjct: 120 FDDEQKSILEIKEKLEDPDLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSN 179
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGEL---------ASSAMMDGDSPQQKIPQNGN-H 225
+VR+L K LV+KWK+ VDEWVK NQPG+L SS + D DSP QK NGN
Sbjct: 180 NVRRLAKQLVKKWKETVDEWVKFNQPGDLEPPSLIEQSISSNVADEDSPVQKALHNGNRQ 239
Query: 226 QVPDFAYSPNPHNGSSGSDKNN--SEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQR 283
QVPDF YSP P NG S S KN+ +EPERK + P A P+ P Q+
Sbjct: 240 QVPDFGYSPVPQNGYSSSSKNSNITEPERKPRPV-AAAAPPPRRESPSPAKPSRPSPSQQ 298
Query: 284 --PREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFG 341
PR+ KE +E FD +ARKRLQ+NY++ ENAK+QRTIQVMDIHEIPKPK F
Sbjct: 299 TIPRD-KEHKEVDFD------TARKRLQQNYRQAENAKKQRTIQVMDIHEIPKPKKGGFF 351
Query: 342 KNKGGSSQ-GRHW 353
KGGSSQ GRHW
Sbjct: 352 PRKGGSSQGGRHW 364
>gi|225431398|ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
vinifera]
Length = 305
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 240/355 (67%), Gaps = 54/355 (15%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MD D+FR IL+ +GVDVW FI+TAI VA DY EL+ RRD IVER+Y ++SRC +C+
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY---MSSRCGSCN 57
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVN--GDDDIDIENDNDIIDPYGGLFDD 118
++K + DE + SP TP S+N G +D YGGL D+
Sbjct: 58 LRYQHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSED-----------RYGGLLDE 106
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
E+ RIL+IKEHLE PDQ +D+++DLLQ+LADMDITFKALKETDIGRHVN+LRKH SNDVR
Sbjct: 107 EEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVR 166
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQKIPQNGNHQVPDFAYSPNPH 237
+LVKHLVRKWKD+VDEWVK N GE SSA+M +GDSP QKIP+ G+HQVPDF YSPNP
Sbjct: 167 RLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMAEGDSPPQKIPRTGHHQVPDFGYSPNPQ 226
Query: 238 NGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDA 297
NGSSGSDKNN+EP P+K+ R++ D
Sbjct: 227 NGSSGSDKNNAEP--------EPKKQ---------------------------RDTAIDP 251
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRH 352
D + ASARKRL ENY+ +NAK+QRTIQVMDIH+IPKPKN FF K K G SQGRH
Sbjct: 252 D-KFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVG-SQGRH 304
>gi|147768575|emb|CAN60620.1| hypothetical protein VITISV_006169 [Vitis vinifera]
Length = 333
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 192/383 (50%), Positives = 232/383 (60%), Gaps = 82/383 (21%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
MD D+FR IL+ +GVDVW FI+TAI VA DY EL+ RRD IVER+Y ++SRC +C+
Sbjct: 1 MDRDEFRLILRNSGVDVWEFINTAISVAYSDYGDELRHRRDGIVERMY---MSSRCGSCN 57
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVN--GDDDIDIENDNDIIDPYGGLFDD 118
++K + DE + SP TP S+N G +D GGL D+
Sbjct: 58 LRYQHSGLDKGCDEEKEDEKDDEKDKSPLTPQSINRSGSED-----------RCGGLPDE 106
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
E+ RIL+IKEHLE PDQ +D+++DLLQ+LADMDITFKALKETDIGRHVN+LRKH SNDVR
Sbjct: 107 EEARILDIKEHLEAPDQPDDSIVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVR 166
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHN 238
+LVKHLVRKWKD+VDEWVK N GE SSA+MDG
Sbjct: 167 RLVKHLVRKWKDLVDEWVKSNPAGEFTSSALMDG-------------------------- 200
Query: 239 GSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDAD 298
SSGSDKNN+EPE K K +PRKE + +RP QSA P S P K+ R++ D D
Sbjct: 201 -SSGSDKNNAEPEPKVKA--IPRKE-VPTRPAQSA----PVSSSFPPPNKQ-RDTAIDPD 251
Query: 299 SRLASARKRLQENYKREEN-----------------------------AKRQRTIQVMDI 329
+ ASARKRL ENY+ +N AK+QRTIQVMDI
Sbjct: 252 -KFASARKRLHENYQEAQNGLILSSKLWIHNVLLLVLELMVCVGLFVEAKKQRTIQVMDI 310
Query: 330 HEIPKPKNAFFGKNKGGSSQGRH 352
H+IPKPKN FF K K G SQGRH
Sbjct: 311 HDIPKPKNTFFAKPKVG-SQGRH 332
>gi|16648730|gb|AAL25557.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
gi|20147241|gb|AAM10334.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
Length = 302
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 216/315 (68%), Gaps = 26/315 (8%)
Query: 52 IASRCRNCDFGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDI-----DIENDN 106
+A++CRNCDFG G I R + V + + ++++ ++E+D+
Sbjct: 1 MANKCRNCDFGGGGNVTEAAIGRVNNGRVHEETEEEDEEGVTAAAEEEVREKSVNVEDDD 60
Query: 107 DIIDPYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHV 166
D DP+ GLFDDEQK I+EIKE LEDPD SE++L++LLQ+L DMDITF+AL+ETDIGRHV
Sbjct: 61 DF-DPFAGLFDDEQKSIVEIKEKLEDPDLSEESLVELLQNLEDMDITFQALQETDIGRHV 119
Query: 167 NQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-DGDSPQQKIPQNGN- 224
N++RKH SN+VR+L K LV+KWK+ VDEWVK NQPG+L +++ D DSP QK NG+
Sbjct: 120 NRVRKHPSNNVRRLAKQLVKKWKETVDEWVKFNQPGDLEPPSLIADEDSPVQKALHNGSR 179
Query: 225 HQVPDFAYSPNPHNGSSGSDKNN--SEPERKSKQ-APLPRKEALSSRPPQSASPAAPHSV 281
QVPDF YSP P NG S S KN+ +EPERK + AP PR+E+ P A P+ P
Sbjct: 180 QQVPDFGYSPVPQNGYSSSSKNSNITEPERKPRPVAPQPRRES-----PSPAKPSRPSPS 234
Query: 282 QR--PREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAF 339
Q+ PR+ KE +E FD +ARKRLQ+NY++ ENAK+QRTIQVMDIH+IPKPK
Sbjct: 235 QQTIPRD-KEHKEVDFD------TARKRLQQNYRQAENAKKQRTIQVMDIHDIPKPKKGG 287
Query: 340 FGKNKGGSSQ-GRHW 353
F KGGSSQ GRHW
Sbjct: 288 FFPRKGGSSQGGRHW 302
>gi|343172617|gb|AEL99012.1| transcription elongation factor (TFIIS) family protein, partial
[Silene latifolia]
Length = 278
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 143/234 (61%), Positives = 171/234 (73%), Gaps = 24/234 (10%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
KRI IKE LEDP+Q++D+L+DLLQ+LADMDITFKALKETDIGRHVN+LRKH SNDVR+L
Sbjct: 56 KRIFSIKEQLEDPNQTDDSLVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRQL 115
Query: 181 VKHLVRKWKDIVDEWVKLNQPGELASSA--MMDGDSPQQKIPQN---GNH-QVPDFAYSP 234
VK LVRKWKD+VDEWV+ N G + SS+ + DGDSPQQ I +N G+H QVPDF YSP
Sbjct: 116 VKLLVRKWKDLVDEWVRANTAGGVHSSSNLIADGDSPQQNISKNHPSGHHNQVPDFGYSP 175
Query: 235 NPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESREST 294
NPHNGSSGSDK+ +P+ P PPQ A PA +P QK+
Sbjct: 176 NPHNGSSGSDKSEYKPKAVPAHTP----------PPQRAPPAKQTPALQPNRQKQ----- 220
Query: 295 FDAD-SRLASARKRLQENYKREENAKRQRTIQVMDIHEIP--KPKNAFFGKNKG 345
AD RLASARKRLQENY+ +NAK+QRT+QV+DIHE+P K KN+FFG+NK
Sbjct: 221 VAADPERLASARKRLQENYQEAQNAKKQRTMQVLDIHELPKGKAKNSFFGRNKA 274
>gi|343172619|gb|AEL99013.1| transcription elongation factor (TFIIS) family protein, partial
[Silene latifolia]
Length = 278
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/233 (61%), Positives = 170/233 (72%), Gaps = 22/233 (9%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
KRI IKE LEDP Q++D+L+DLLQ+LADMDITFKALKETDIGRHVN+LRKH SNDVR+L
Sbjct: 56 KRIFSIKEQLEDPKQTDDSLVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRQL 115
Query: 181 VKHLVRKWKDIVDEWVKLNQPGELASSA--MMDGDSPQQKIPQN---GNH-QVPDFAYSP 234
VK LVRKWKD+VDEWV+ N G + SS+ + DGDSPQQ I +N G+H QVPDF YSP
Sbjct: 116 VKLLVRKWKDLVDEWVRANTAGGVHSSSNLIADGDSPQQNISKNHPSGHHNQVPDFGYSP 175
Query: 235 NPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESREST 294
NPHNGS GSDK+ +P+ S P PPQ A PA +P QK +
Sbjct: 176 NPHNGSFGSDKSEYKPKAFSAHTP----------PPQRAPPAKQTPALQPNRQK---QVA 222
Query: 295 FDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIP--KPKNAFFGKNKG 345
D D RLASARKRLQENY+ +NAK+QRT+QV+DIHE+P K KN+FFG+NK
Sbjct: 223 ADPD-RLASARKRLQENYQEAQNAKKQRTMQVLDIHELPKGKAKNSFFGRNKA 274
>gi|242084884|ref|XP_002442867.1| hypothetical protein SORBIDRAFT_08g004100 [Sorghum bicolor]
gi|241943560|gb|EES16705.1| hypothetical protein SORBIDRAFT_08g004100 [Sorghum bicolor]
Length = 348
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 216/354 (61%), Gaps = 36/354 (10%)
Query: 13 AGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNGVVDVNKEI 72
+G DVW +D A+ A+ D EL+ RRD IV+RLYA ++RCRNC + +
Sbjct: 16 SGSDVWDLVDAALAAAARDSPAELRARRDGIVQRLYAG--SARCRNC---------DADA 64
Query: 73 SRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKRILEIKEHLED 132
+ A A+P+ + D+++D ++ +D + G+ + +IL IK+ LED
Sbjct: 65 PPPPAAQPNGAVAAAPAAASPASPDEEVDADSLDDEEEADAGV----ESKILAIKDFLED 120
Query: 133 PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
PDQSED ++ LLQ+LADMDIT+KAL++TDIGRHVN LRKH S++VR+LVK LVRKWK+IV
Sbjct: 121 PDQSEDEMVSLLQNLADMDITYKALQDTDIGRHVNGLRKHPSSEVRQLVKLLVRKWKEIV 180
Query: 193 DEWVKL-NQPGELASSAMMDGDSPQQKIPQ-NGNHQVPDFAYSPNP--HNGSSGSDKNN- 247
D+WV+L N G++ S + DGDSP + P+ + N DF YS +P HN S +N
Sbjct: 181 DDWVRLHNSGGDVGGSIISDGDSPDKVQPKYHQNTHASDFKYSSSPQSHNVLSSERSSNH 240
Query: 248 ---SEPERKSKQAPLP----RKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSR 300
K + +P P K+ S+ P + S +AP R +E + + D++ +
Sbjct: 241 NLVESAVEKRRTSPAPAYHNTKQNNSNNYP-AVSSSAP-----ARAMREQKNTLLDSE-K 293
Query: 301 LASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNKGGSSQGRH 352
L SARKRLQENY+ +NAK+QRTIQVMDIH+IPKPK N F K+ GG +H
Sbjct: 294 LDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNTFIRKSGGGGFPAKH 347
>gi|357464499|ref|XP_003602531.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
gi|355491579|gb|AES72782.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
Length = 226
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 150/207 (72%), Gaps = 13/207 (6%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIAS--RCRN 58
MDLDDFRSIL TAGVDVW FIDTAI VA+ D A ELK RRD IVERLYA C+N
Sbjct: 1 MDLDDFRSILHTAGVDVWMFIDTAISVAAQDNAGELKRRRDGIVERLYAASTEGIPMCQN 60
Query: 59 CDFGNGVVDVNKEISRGQHDEVKAAQQ------ASPSTPHSVNGDDDIDIENDNDIIDPY 112
CD G +V + +I + + +Q +SP TP S + + +++ IDPY
Sbjct: 61 CDGGQRLVTNDNQIKKENSPSLSPERQPRRGGASSPPTPQSEGNE-----DGEDEEIDPY 115
Query: 113 GGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
GGLFDDEQK+ILEIKE LEDP QSED L++LLQ+L D+DITF+ LKETDIGR+VNQLRKH
Sbjct: 116 GGLFDDEQKKILEIKELLEDPHQSEDTLMELLQNLVDIDITFQELKETDIGRNVNQLRKH 175
Query: 173 SSNDVRKLVKHLVRKWKDIVDEWVKLN 199
S+DVR+LVK LV+KWK+IVD+WVK N
Sbjct: 176 PSSDVRRLVKLLVKKWKEIVDDWVKQN 202
>gi|357160752|ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832597 [Brachypodium
distachyon]
Length = 342
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 212/354 (59%), Gaps = 42/354 (11%)
Query: 13 AGVD-VWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNGVVDVNKE 71
GV+ VW +D A+ A EL+ RRD IVERLYA SRCRNCD
Sbjct: 16 GGVEGVWELVDAALASAP---PAELRARRDGIVERLYAA--GSRCRNCDA---------- 60
Query: 72 ISRGQHDEVKAAQQASPSTPHSVNGDDDIDIEN-DNDIIDPYGGLFDDEQKRILEIKEHL 130
+ A+Q + + +++ ++D D++ D + + +IL I++ L
Sbjct: 61 -------VPQLARQPAAAAAAALSPEEDADVDGLGEDEEEADDDEAAGAESKILAIRDFL 113
Query: 131 EDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKD 190
EDPDQSED L+ LLQ+LADMDIT+KAL++TDIGRHVN LRKH S +VR+LVK LVRKWK+
Sbjct: 114 EDPDQSEDELVSLLQNLADMDITYKALQDTDIGRHVNSLRKHPSGEVRQLVKLLVRKWKE 173
Query: 191 IVDEWVKL-NQPGELASSAMMDGDSPQQKIPQN-GNHQVPDFAYSPNP--HNG-SSGSDK 245
IVD WV+L N G+ SS + DGDSP++ ++ N QV DF YSP+P HNG SS
Sbjct: 174 IVDGWVRLHNSGGDGGSSILTDGDSPEKTQGKSYQNAQVSDFKYSPSPQRHNGLSSDRSS 233
Query: 246 NNSEPE-----RKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSR 300
NN+ E ++ AP + +S S + +AP PR +E +++ D + +
Sbjct: 234 NNNGFETTMERHRASPAPSYNQTKQNSSNNYSTTSSAP-----PRTMREQKDNNLDLE-K 287
Query: 301 LASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNKGGSSQGRH 352
L SARKRL ENY+ +NAK+QRT+QV+DIH+IPKPK N F K GG GRH
Sbjct: 288 LDSARKRLHENYQEAQNAKKQRTMQVLDIHDIPKPKNRNTFIRKGGGGGLPGRH 341
>gi|242067543|ref|XP_002449048.1| hypothetical protein SORBIDRAFT_05g004000 [Sorghum bicolor]
gi|241934891|gb|EES08036.1| hypothetical protein SORBIDRAFT_05g004000 [Sorghum bicolor]
Length = 358
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 206/350 (58%), Gaps = 28/350 (8%)
Query: 10 LKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNGVVDVN 69
L G D+W +D A+ A+ D +L+ RRD IVERLYA A C NC G
Sbjct: 11 LDAFGGDMWALVDAALDAAARDRPDDLRARRDGIVERLYAAATAG-CSNC---AGRPPPL 66
Query: 70 KEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKRILEIKEH 129
++ DE + A S+ ++ + D + + G + +I+ I++
Sbjct: 67 AALAAAGLDEEDGEEAAPASSAVALEAEADAQAGGAEERAEELGAGAPGLESKIVAIRDF 126
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
L+DP+Q ED L+ LLQSLADMD+T+ AL+ETDIGR VN LRKHSS +VR+LVK L+RKWK
Sbjct: 127 LDDPNQPEDELVRLLQSLADMDVTYSALQETDIGRQVNGLRKHSSAEVRRLVKQLIRKWK 186
Query: 190 DIVDEWVKLNQPGELASSAMM--DGDSPQQKIPQNGNHQVP---DFAYSPNP--HNGSSG 242
+IVDEWV+L+ G S+ +M DGDSP KI Q +HQ P F YSP+P NGS+
Sbjct: 187 EIVDEWVRLHNSGSDGSATVMTADGDSP-DKI-QGRSHQSPRVSGFQYSPSPQRQNGSAS 244
Query: 243 SDKNN---SEPERKSKQAPLP----RKEALSSRPPQSASPAAPHSVQRPREQKESRESTF 295
N S + K + +P+P K+ ++ + + +AP V R E R+S
Sbjct: 245 ERAINGFDSTMDAKRRASPVPAHHNSKQMNNNHNSATTTSSAPAKVTR-----EQRQSLL 299
Query: 296 DADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKN 343
D D +L SARKRLQENY+ +NAK+QRTIQVMDI++IPKPK NAF K+
Sbjct: 300 DLD-KLDSARKRLQENYQEAQNAKKQRTIQVMDINDIPKPKNRNAFIRKS 348
>gi|326523085|dbj|BAJ88583.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 347
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/343 (45%), Positives = 210/343 (61%), Gaps = 34/343 (9%)
Query: 7 RSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNGVV 66
R++ G DVW +D A+ VA+ +L+ RRD IVERLYA SRCRNCD
Sbjct: 9 RALAAFGGGDVWDLVDAALAVAA---PADLRARRDGIVERLYA---GSRCRNCD----AP 58
Query: 67 DVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKRILEI 126
+ + R + V A Q + + D+D + ID GL + +IL I
Sbjct: 59 ESPPQPPRQPAEAVSPAWQEEEEE-AAAEEEADVDGLGQEEEIDDGAGL----ESKILAI 113
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
++ LEDPDQSE+ L+ LLQ+LADMDIT+KAL+ETDIGRHVN LRKH S DVR+LVK LVR
Sbjct: 114 RDFLEDPDQSEEELVSLLQNLADMDITYKALQETDIGRHVNGLRKHPSGDVRQLVKLLVR 173
Query: 187 KWKDIVDEWVKL-NQPGELASSAMMDGDSPQQKIPQN-GNHQVPDFAYSPNP---HNG-S 240
KWK+IVD WV+L N G+ +S + DGDSP++ ++ N +V DF Y+P+P H+G S
Sbjct: 174 KWKEIVDGWVRLHNSGGDGGNSILTDGDSPEKTQGKSYQNARVSDFKYTPSPPQRHSGLS 233
Query: 241 SGSDKNNSEPE-----RKSKQAPLPRKEALSSRPPQS-ASPAAPHSVQRPREQKESREST 294
S +NN+ E R+S AP+ ++ S S +AP REQK++
Sbjct: 234 SERSRNNNGFESTLERRRSSPAPMYHHTKQNNGNNYSTTSSSAPARAM--REQKDNH--- 288
Query: 295 FDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
D +L SARKRLQENY+ +NAK+QRT+QV+DIH+IPKPKN
Sbjct: 289 --LDEKLDSARKRLQENYQEAQNAKKQRTMQVLDIHDIPKPKN 329
>gi|413925704|gb|AFW65636.1| hypothetical protein ZEAMMB73_434126 [Zea mays]
Length = 355
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 213/363 (58%), Gaps = 39/363 (10%)
Query: 10 LKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNGVVDVN 69
L G ++W +D A+ A+ D EL+ RRD IVERLYA A+ C NC V
Sbjct: 11 LDAFGGNLWALVDAALDAAARDRPDELRARRDSIVERLYAA--AAGCSNCAGRPPSVAAL 68
Query: 70 KEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKRILEIKEH 129
+ D ++A+P++P + E +++ G D + +I+ I++
Sbjct: 69 AAAGLEEED----GEEAAPASPWAEADAQAGGAEAQTEVL---GAGEPDLESKIVAIRDF 121
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
LEDP+Q E+ L+ LLQ+LADMD+T+ AL+ETDIGR VN LRKH S +VR+LVK L+RKWK
Sbjct: 122 LEDPNQPENELVSLLQNLADMDVTYNALQETDIGRQVNGLRKHPSAEVRRLVKQLIRKWK 181
Query: 190 DIVDEWVKL-NQPGELASSAMMDGDSPQQKIPQNGNHQVP---DFAYSPNPH--NGSSGS 243
+IVD+WV+L N G+ ++S M DGDSP KI Q +HQ P F YSP+P NGS+
Sbjct: 182 EIVDDWVRLDNSGGDGSASVMTDGDSP-HKI-QGRSHQSPRVSGFQYSPSPQRFNGSTSE 239
Query: 244 DKNN---SEPERKSKQAPLPRKEALSSR---------PPQSASPAAPHSVQRPREQKESR 291
NN S + K + +P+P +SR +++ +AP V R E +
Sbjct: 240 MANNGFESTMDAKRRASPVPAHH--NSRQMNNNHHSTTITTSTSSAPAKVTR-----EQK 292
Query: 292 ESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNKGGSSQ 349
+S D D RL SARKRLQENY+ +NAK+QRTIQVMDI++IPKPK NAF K+ G
Sbjct: 293 QSLVDLD-RLDSARKRLQENYQEAQNAKKQRTIQVMDINDIPKPKSRNAFIRKSGSGGLP 351
Query: 350 GRH 352
RH
Sbjct: 352 ARH 354
>gi|226498412|ref|NP_001143340.1| uncharacterized protein LOC100275944 [Zea mays]
gi|195617136|gb|ACG30398.1| hypothetical protein [Zea mays]
gi|195618500|gb|ACG31080.1| hypothetical protein [Zea mays]
Length = 357
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 156/381 (40%), Positives = 205/381 (53%), Gaps = 65/381 (17%)
Query: 6 FRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNGV 65
R L G DVW +D A+ A+ D +L+ RRD IV+RLYA A+RCRNCD
Sbjct: 7 LRRALAAFGGDVWDLVDAALAAAARDSPGDLRARRDGIVQRLYAG--AARCRNCD----- 59
Query: 66 VDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQK---- 121
A +P+ P N EQ+
Sbjct: 60 ----------------ADATPAPAQPRKANDAVAAAAAASPAAAAASAFPASPEQEVDAD 103
Query: 122 ---------------RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHV 166
+IL I++ LEDPDQSED ++ LLQ+LADMDIT+KAL++TDIGRHV
Sbjct: 104 GLDDVDDAADAGMESKILAIRDFLEDPDQSEDDIVSLLQNLADMDITYKALQDTDIGRHV 163
Query: 167 NQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKL-NQPGELASSAMMDGDSP---QQKIPQN 222
N LRKH S++VR+LVK LVRKWK+IVD+WV+L N G+ + S + DGDSP Q K QN
Sbjct: 164 NGLRKHPSSEVRQLVKLLVRKWKEIVDDWVRLHNSGGDGSGSIISDGDSPDKVQSKYHQN 223
Query: 223 GNHQVPDFAYSPNP--HNGSSGSDKNN------SEPERKSKQAP-LPRKEALSSRPPQSA 273
+ DF Y P+P HN S +N + +R+S AP + +S S
Sbjct: 224 TH--ASDFKYPPSPQRHNVFSSERSSNHNLVESTTEKRRSSPAPAYNNTKQNNSNNYSSI 281
Query: 274 SPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIP 333
S +AP R +E + + D++ +L SARKRLQENY+ +NAK+QRTIQVMDIH+IP
Sbjct: 282 SSSAP-----ARAIREQKNTLLDSE-KLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIP 335
Query: 334 KPK--NAFFGKNKGGSSQGRH 352
KPK N F K+ GG +H
Sbjct: 336 KPKNRNTFVRKSGGGGFPAKH 356
>gi|115487514|ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group]
gi|108862239|gb|ABA95889.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113648751|dbj|BAF29263.1| Os12g0165700 [Oryza sativa Japonica Group]
gi|125535897|gb|EAY82385.1| hypothetical protein OsI_37597 [Oryza sativa Indica Group]
Length = 340
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/242 (55%), Positives = 166/242 (68%), Gaps = 23/242 (9%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+ +IL I++ LEDPDQSED L+ LLQSLADMDIT+KAL+ETDIGRHVN LRKH S +VR+
Sbjct: 101 ESKILAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQ 160
Query: 180 LVKHLVRKWKDIVDEWVKL-NQPGELASSAMMDGDSP---QQKIPQNGNHQVPDFAYSPN 235
LVK LVRKWK+IVD+WV+L N G+ SS + DGDSP Q + QN QV DF YSP+
Sbjct: 161 LVKLLVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNA--QVSDFKYSPS 218
Query: 236 P--HNG-SSGSDKNNSEPE---RKSKQAPLP---RKEALSSRPPQSASPAAPHSVQRPRE 286
P HNG SS NN+ E K + +P P + +S + S +AP V+ RE
Sbjct: 219 PQRHNGLSSERSSNNNGVESMIEKRRTSPAPTYHNNKQNNSIGYSTTSSSAP--VRTVRE 276
Query: 287 QKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNK 344
QK ++ D + +L SARKRLQENY+ +NAK+QRTIQVMDIH+IPKPK NAF K
Sbjct: 277 QK---DNLMDLE-KLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNAFIRKGG 332
Query: 345 GG 346
GG
Sbjct: 333 GG 334
>gi|226495529|ref|NP_001143974.1| uncharacterized protein LOC100276791 [Zea mays]
gi|195634779|gb|ACG36858.1| hypothetical protein [Zea mays]
gi|413925705|gb|AFW65637.1| hypothetical protein ZEAMMB73_434126 [Zea mays]
Length = 356
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 213/364 (58%), Gaps = 40/364 (10%)
Query: 10 LKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNGVVDVN 69
L G ++W +D A+ A+ D EL+ RRD IVERLYA A+ C NC V
Sbjct: 11 LDAFGGNLWALVDAALDAAARDRPDELRARRDSIVERLYAA--AAGCSNCAGRPPSVAAL 68
Query: 70 KEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKRILEIKEH 129
+ D ++A+P++P + E +++ G D + +I+ I++
Sbjct: 69 AAAGLEEED----GEEAAPASPWAEADAQAGGAEAQTEVL---GAGEPDLESKIVAIRDF 121
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
LEDP+Q E+ L+ LLQ+LADMD+T+ AL+ETDIGR VN LRKH S +VR+LVK L+RKWK
Sbjct: 122 LEDPNQPENELVSLLQNLADMDVTYNALQETDIGRQVNGLRKHPSAEVRRLVKQLIRKWK 181
Query: 190 DIVDEWVKLNQPGELASSAMM--DGDSPQQKIPQNGNHQVP---DFAYSPNPH--NGSSG 242
+IVD+WV+L+ G S+++M DGDSP KI Q +HQ P F YSP+P NGS+
Sbjct: 182 EIVDDWVRLDNSGGDGSASVMTADGDSP-HKI-QGRSHQSPRVSGFQYSPSPQRFNGSTS 239
Query: 243 SDKNN---SEPERKSKQAPLPRKEALSSR---------PPQSASPAAPHSVQRPREQKES 290
NN S + K + +P+P +SR +++ +AP V R E
Sbjct: 240 EMANNGFESTMDAKRRASPVPAHH--NSRQMNNNHHSTTITTSTSSAPAKVTR-----EQ 292
Query: 291 RESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNKGGSS 348
++S D D RL SARKRLQENY+ +NAK+QRTIQVMDI++IPKPK NAF K+ G
Sbjct: 293 KQSLVDLD-RLDSARKRLQENYQEAQNAKKQRTIQVMDINDIPKPKSRNAFIRKSGSGGL 351
Query: 349 QGRH 352
RH
Sbjct: 352 PARH 355
>gi|125578614|gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japonica Group]
Length = 241
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 169/248 (68%), Gaps = 24/248 (9%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+ +IL I++ LEDPDQSED L+ LLQSLADMDIT+KAL+ETDIGRHVN LRKH S +VR+
Sbjct: 2 ESKILAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQ 61
Query: 180 LVKHLVRKWKDIVDEWVKL-NQPGELASSAMMDGDSP---QQKIPQNGNHQVPDFAYSPN 235
LVK LVRKWK+IVD+WV+L N G+ SS + DGDSP Q + QN QV DF YSP+
Sbjct: 62 LVKLLVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNA--QVSDFKYSPS 119
Query: 236 P--HNG-SSGSDKNNSEPE---RKSKQAPLP---RKEALSSRPPQSASPAAPHSVQRPRE 286
P HNG SS NN+ E K + +P P + +S + S +AP V+ RE
Sbjct: 120 PQRHNGLSSERSSNNNGVESMIEKRRTSPAPTYHNNKQNNSIGYSTTSSSAP--VRTVRE 177
Query: 287 QKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNK 344
QK ++ D + +L SARKRLQENY+ +NAK+QRTIQVMDIH+IPKPK NAF K
Sbjct: 178 QK---DNLMDLE-KLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNAFIRKG- 232
Query: 345 GGSSQGRH 352
GG G+H
Sbjct: 233 GGGLPGKH 240
>gi|115484349|ref|NP_001065836.1| Os11g0166800 [Oryza sativa Japonica Group]
gi|113644540|dbj|BAF27681.1| Os11g0166800, partial [Oryza sativa Japonica Group]
Length = 238
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 163/243 (67%), Gaps = 18/243 (7%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+IL IK+ LED DQSED L+ LLQSLADMDIT+KAL+ETDIGRHVN LRKH S +VR LV
Sbjct: 1 KILAIKDFLEDEDQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLV 60
Query: 182 KHLVRKWKDIVDEWVKL-NQPGELASSAMMDGDSPQQKIPQN-GNHQVPDFAYSPNP--H 237
K L+RKWK+IVD+WV+L N G+ ++S + DG+SP++ +N + QV +F YSP+P H
Sbjct: 61 KQLIRKWKEIVDDWVRLHNSSGDASNSIITDGNSPEKIQGKNQQSSQVSEFKYSPSPSRH 120
Query: 238 NGSSGSDKNN---SEPERKSKQAPLP---RKEALSSRPPQSASPAAPHSVQRPREQKESR 291
N SS +N S K + +P P +++ + S +AP R KE +
Sbjct: 121 NNSSSERVSNGIASIAATKHRASPAPAHHNARQINNTHHSTTSSSAP-----ARMVKEQK 175
Query: 292 ESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNKGGSSQ 349
+S D + RL SARKRLQENY+ +NAK+QRTIQVMDI+EIPKPK NAF K GG
Sbjct: 176 DSHLDLE-RLDSARKRLQENYQEAQNAKKQRTIQVMDINEIPKPKNRNAFIRKGNGGGFP 234
Query: 350 GRH 352
RH
Sbjct: 235 ARH 237
>gi|62734379|gb|AAX96488.1| AT5g09850/MYH9_6 [Oryza sativa Japonica Group]
gi|77548900|gb|ABA91697.1| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 339
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 163/243 (67%), Gaps = 18/243 (7%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+IL IK+ LED DQSED L+ LLQSLADMDIT+KAL+ETDIGRHVN LRKH S +VR LV
Sbjct: 102 KILAIKDFLEDEDQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLV 161
Query: 182 KHLVRKWKDIVDEWVKL-NQPGELASSAMMDGDSPQQKIPQN-GNHQVPDFAYSPNP--H 237
K L+RKWK+IVD+WV+L N G+ ++S + DG+SP++ +N + QV +F YSP+P H
Sbjct: 162 KQLIRKWKEIVDDWVRLHNSSGDASNSIITDGNSPEKIQGKNQQSSQVSEFKYSPSPSRH 221
Query: 238 NGSSGSDKNN---SEPERKSKQAPLP---RKEALSSRPPQSASPAAPHSVQRPREQKESR 291
N SS +N S K + +P P +++ + S +AP R KE +
Sbjct: 222 NNSSSERVSNGIASIAATKHRASPAPAHHNARQINNTHHSTTSSSAP-----ARMVKEQK 276
Query: 292 ESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNKGGSSQ 349
+S D + RL SARKRLQENY+ +NAK+QRTIQVMDI+EIPKPK NAF K GG
Sbjct: 277 DSHLDLE-RLDSARKRLQENYQEAQNAKKQRTIQVMDINEIPKPKNRNAFIRKGNGGGFP 335
Query: 350 GRH 352
RH
Sbjct: 336 ARH 338
>gi|218185312|gb|EEC67739.1| hypothetical protein OsI_35248 [Oryza sativa Indica Group]
Length = 338
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 163/243 (67%), Gaps = 18/243 (7%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+IL IK+ LED DQSED L+ LLQSLADMDIT+KAL+ETDIGRHVN LRKH S +VR LV
Sbjct: 101 KILAIKDFLEDEDQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLV 160
Query: 182 KHLVRKWKDIVDEWVKL-NQPGELASSAMMDGDSPQQKIPQN-GNHQVPDFAYSPNP--H 237
K L+RKWK+IVD+WV+L N G+ ++S + DG+SP++ +N + QV +F YSP+P H
Sbjct: 161 KQLIRKWKEIVDDWVRLHNSSGDASNSIITDGNSPEKIQGKNQQSSQVSEFKYSPSPSRH 220
Query: 238 NGSSGSDKNN---SEPERKSKQAPLP---RKEALSSRPPQSASPAAPHSVQRPREQKESR 291
N SS +N S K + +P P +++ + S +AP R KE +
Sbjct: 221 NNSSSERVSNGIASIAATKHRASPAPAHHNARQINNTHHSTTSSSAP-----ARMVKEQK 275
Query: 292 ESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNKGGSSQ 349
+S D + RL SARKRLQENY+ +NAK+QRTIQVMDI+EIPKPK NAF K GG
Sbjct: 276 DSHLDLE-RLDSARKRLQENYQEAQNAKKQRTIQVMDINEIPKPKNRNAFIRKGNGGGFP 334
Query: 350 GRH 352
RH
Sbjct: 335 ARH 337
>gi|108862241|gb|ABA95891.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 229
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/227 (55%), Positives = 154/227 (67%), Gaps = 23/227 (10%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
QSED L+ LLQSLADMDIT+KAL+ETDIGRHVN LRKH S +VR+LVK LVRKWK+IVD+
Sbjct: 5 QSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDD 64
Query: 195 WVKL-NQPGELASSAMMDGDSP---QQKIPQNGNHQVPDFAYSPNP--HNG-SSGSDKNN 247
WV+L N G+ SS + DGDSP Q + QN QV DF YSP+P HNG SS NN
Sbjct: 65 WVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNA--QVSDFKYSPSPQRHNGLSSERSSNN 122
Query: 248 SEPE---RKSKQAPLP---RKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRL 301
+ E K + +P P + +S + S +AP V+ REQK ++ D + +L
Sbjct: 123 NGVESMIEKRRTSPAPTYHNNKQNNSIGYSTTSSSAP--VRTVREQK---DNLMDLE-KL 176
Query: 302 ASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGKNKGG 346
SARKRLQENY+ +NAK+QRTIQVMDIH+IPKPK NAF K GG
Sbjct: 177 DSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNAFIRKGGGG 223
>gi|223948681|gb|ACN28424.1| unknown [Zea mays]
gi|413916220|gb|AFW56152.1| hypothetical protein ZEAMMB73_157798 [Zea mays]
Length = 355
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 154/242 (63%), Gaps = 17/242 (7%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+ +IL I++ LEDPDQSED ++ LLQ+LADMDIT+KAL++TDIGRHVN LRKH S++VR+
Sbjct: 114 ESKILAIRDFLEDPDQSEDDIVSLLQNLADMDITYKALQDTDIGRHVNGLRKHPSSEVRQ 173
Query: 180 LVKHLVRKWKDIVDEWVKL-NQPGELASSAMMDGDSP---QQKIPQNGNHQVPDFAYSPN 235
LVK LVRKWK+IVD+WV+L N G+ + S + DGDSP Q K QN + DF Y P+
Sbjct: 174 LVKLLVRKWKEIVDDWVRLHNSCGDGSGSIISDGDSPDKVQSKYHQNTH--ASDFKYPPS 231
Query: 236 P--HNGSSGSDKNN----SEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRP-REQK 288
P HN S +N K + +P P + S + + R REQK
Sbjct: 232 PQRHNVLSSERSSNHNLVESTMEKRRTSPAPAYNNTKQNNSNNYSSISSSAPARAIREQK 291
Query: 289 ESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSS 348
+T +L SARKRLQENY+ +NAK+QRTIQVMDIH+IPKPKN K GSS
Sbjct: 292 ----NTLLDSEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNTFVRKSGSS 347
Query: 349 QG 350
G
Sbjct: 348 AG 349
>gi|108862240|gb|ABA95890.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 334
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 143/221 (64%), Gaps = 21/221 (9%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+ +IL I++ LEDPDQSED L+ LLQSLADMDIT+KAL+ETDIGRHVN LRKH S +VR+
Sbjct: 101 ESKILAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQ 160
Query: 180 LVKHLVRKWKDIVDEWVKL-NQPGELASSAMMDGDSP---QQKIPQNGNHQVPDFAYSPN 235
LVK LVRKWK+IVD+WV+L N G+ SS + DGDSP Q + QN QV DF YSP+
Sbjct: 161 LVKLLVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNA--QVSDFKYSPS 218
Query: 236 P--HNG-SSGSDKNNSEPE---RKSKQAPLP---RKEALSSRPPQSASPAAPHSVQRPRE 286
P HNG SS NN+ E K + +P P + +S + S +AP V+ RE
Sbjct: 219 PQRHNGLSSERSSNNNGVESMIEKRRTSPAPTYHNNKQNNSIGYSTTSSSAP--VRTVRE 276
Query: 287 QKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVM 327
QK ++ D + +L SARKRLQENY+ +N T M
Sbjct: 277 QK---DNLMDLE-KLDSARKRLQENYQEAQNGNDFMTYCFM 313
>gi|222615579|gb|EEE51711.1| hypothetical protein OsJ_33093 [Oryza sativa Japonica Group]
Length = 210
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 140/215 (65%), Gaps = 18/215 (8%)
Query: 150 MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKL-NQPGELASSA 208
MDIT+KAL+ETDIGRHVN LRKH S +VR LVK L+RKWK+IVD+WV+L N G+ ++S
Sbjct: 1 MDITYKALQETDIGRHVNGLRKHPSGEVRLLVKQLIRKWKEIVDDWVRLHNSSGDASNSI 60
Query: 209 MMDGDSPQQKIPQN-GNHQVPDFAYSPNP--HNGSSGSDKNN---SEPERKSKQAPLP-- 260
+ DG+SP++ +N + QV +F YSP+P HN SS +N S K + +P P
Sbjct: 61 ITDGNSPEKIQGKNQQSSQVSEFKYSPSPSRHNNSSSERVSNGIASIAATKHRASPAPAH 120
Query: 261 -RKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAK 319
+++ + S +AP R KE ++S D + RL SARKRLQENY+ +NAK
Sbjct: 121 HNARQINNTHHSTTSSSAP-----ARMVKEQKDSHLDLE-RLDSARKRLQENYQEAQNAK 174
Query: 320 RQRTIQVMDIHEIPKPK--NAFFGKNKGGSSQGRH 352
+QRTIQVMDI+EIPKPK NAF K GG RH
Sbjct: 175 KQRTIQVMDINEIPKPKNRNAFIRKGNGGGFPARH 209
>gi|77553096|gb|ABA95892.1| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 176
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 96/136 (70%), Gaps = 12/136 (8%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
QSED L+ LLQSLADMDIT+KAL+ETDIGRHVN LRKH S +VR+LVK LVRKWK+IVD+
Sbjct: 5 QSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDD 64
Query: 195 WVKL-NQPGELASSAMMDGDSP---QQKIPQNGNHQVPDFAYSPNP--HNG-SSGSDKNN 247
WV+L N G+ SS + DGDSP Q + QN QV DF YSP+P HNG SS NN
Sbjct: 65 WVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNA--QVSDFKYSPSPQRHNGLSSERSSNN 122
Query: 248 SEPE---RKSKQAPLP 260
+ E K + +P P
Sbjct: 123 NGVESMIEKRRTSPAP 138
>gi|302759146|ref|XP_002962996.1| hypothetical protein SELMODRAFT_404483 [Selaginella moellendorffii]
gi|300169857|gb|EFJ36459.1| hypothetical protein SELMODRAFT_404483 [Selaginella moellendorffii]
Length = 377
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 178/358 (49%), Gaps = 43/358 (12%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLY--ATCIASRCRNCD 60
L+ +RS + D+WT ID I +A+ DY +L+ERRD I E+L+ C A +
Sbjct: 7 LEFWRSFFRDLEHDLWTVIDRGIAIAAADYPDKLRERRDGIAEKLFQQIACPAGPIEEEE 66
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQ 120
V+ +SR H E+ A A D E N ++D G + +
Sbjct: 67 EEAAVL--RGSVSR--HSEISPAITA-------------CDHEYGNSVMDMGSGNREGDV 109
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
K + +IK+ L D D+++D +++LL L D++++ + LK T+IG+ VN LR+H + ++
Sbjct: 110 KEVFKIKKELVDLDKNDDDILELLVRLTDLNLSIETLKATEIGKPVNNLRRHGCDQIKSA 169
Query: 181 VKHLVRKWKDIVDEWVK----LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNP 236
+ L+R WK + DEW K + E + A D + ++ D +
Sbjct: 170 ARKLIRSWKAVADEWAKSLDDVQGNDEQCTPAPPPIDEDELFATTFEMTKLIDLMDNSMD 229
Query: 237 HNGSSG----SDKNNSEPERKSKQAPLP------------RKEALS-SRPPQSASPA--A 277
+N ++G +D++ ++ +P+P R L +R + P A
Sbjct: 230 NNMATGCSISADESPLNSSSRASHSPMPVSPFYNNSGDHFRPSGLKHARKDERKPPMLDA 289
Query: 278 PHSVQRPREQKES-RESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPK 334
P ++ R Q++S RES + +LA+A+++LQE Y+R E AK+ RT+QVMD+ ++PK
Sbjct: 290 PFHRKKERPQQQSRRESGHPENDKLAAAKRKLQEGYQRAETAKKNRTVQVMDLMDLPK 347
>gi|302797152|ref|XP_002980337.1| hypothetical protein SELMODRAFT_420079 [Selaginella moellendorffii]
gi|300151953|gb|EFJ18597.1| hypothetical protein SELMODRAFT_420079 [Selaginella moellendorffii]
Length = 377
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 175/356 (49%), Gaps = 39/356 (10%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
L+ +RS + D+WT ID I +A+ D+ +L+ERRD I E+L+ IA R +
Sbjct: 7 LEFWRSFFRDLEHDLWTVIDRGIAIAAADFPDKLRERRDGIAEKLFQQ-IACRAGPIEEE 65
Query: 63 NGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKR 122
V + S +H E+ A A D E N ++D G + + K
Sbjct: 66 EEEAAVLRG-SVSRHSEISPAITA-------------CDHEYGNSVMDMGSGNREGDVKE 111
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
+ +IK+ L D D+++D +++LL L D++++ + LK T+IG+ VN LR+H + ++ +
Sbjct: 112 VFKIKKELVDLDKNDDDILELLVRLTDLNLSIETLKATEIGKPVNNLRRHGCDQIKSAAR 171
Query: 183 HLVRKWKDIVDEWVK----LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHN 238
L+R WK + DEW K + E + A D + ++ D + +N
Sbjct: 172 KLIRSWKAVADEWAKSLDDVQGNDEQCTPAPPPIDEDELFATTFEMTKLIDLMDNSMDNN 231
Query: 239 GSSG----SDKNNSEPERKSKQAPLP------------RKEALS-SRPPQSASPAAPHSV 281
++G +D++ ++ +P+P R L +R + P S
Sbjct: 232 MATGCSISADESPLNSSSRASHSPMPVSPFYNNSGDHFRPSGLKHARKDERKPPMLDASF 291
Query: 282 QRPRE---QKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPK 334
R +E Q+ RES + +LA+A+++LQE Y+R E AK+ RT+QVMD+ ++PK
Sbjct: 292 HRKKERPQQQSRRESDHPENDKLAAAKRKLQEGYQRAETAKKNRTVQVMDLMDLPK 347
>gi|42567655|ref|NP_196133.3| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|75170631|sp|Q9FHK9.1|MD26B_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26b
gi|9759255|dbj|BAB09690.1| unnamed protein product [Arabidopsis thaliana]
gi|332003450|gb|AED90833.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 436
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 194/431 (45%), Gaps = 86/431 (19%)
Query: 3 LDDFRSILKTAG-VDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDF 61
LD +R + G D++ ID AI+VA+ D + K RRDKI E L+ +C +RC CD
Sbjct: 7 LDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLF-SCRVNRCVGCDH 65
Query: 62 GNGVVDVNKEISRGQH----------DEVKAAQQASPSTPHSVNGDDDIDIEND------ 105
V + E +RG ++ + A + S +S GD++ + N
Sbjct: 66 LELSVPGDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGDNNQIVSNYTFDEAE 125
Query: 106 --NDIIDPYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIG 163
+D I+ + + E RI EI L D+ L+D L+ L M + LK T+IG
Sbjct: 126 ALSDEIEEFS-VVSKEVARIKEI--LLNKEDEPNSVLLDSLRHLKLMSLNVDILKSTEIG 182
Query: 164 RHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQ-------PGELASSAMMDGDSPQ 216
+ VN LRKHSS+ +R+L K L+ +WK++VD+WV + E A+ +++D +
Sbjct: 183 KAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVLDEEEAF 242
Query: 217 QKIPQ---------NG---NHQVPDFAYSPNPHNGS--SGSDKNNSEPERKSKQAPLPRK 262
+P NG +H + NP N + S ++ P+ +K+ P +
Sbjct: 243 PSLPYDVDIFTPEPNGFEISHFFDSLDFDGNPRNSEEHNTSREHERRPQNIAKRKPEGTQ 302
Query: 263 EALSSRPPQSASPAAP-------HSVQRPREQKESREST--------------------- 294
+ P +S P++ V++ EQ+ E+
Sbjct: 303 MRIQDAPFRSIKPSSATDFDGTRRPVKQSTEQRMKNETVSVHKSEKPMIQRKPVVTEQKR 362
Query: 295 ------------FDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGK 342
DAD++ A+++LQE+Y+ ENAK+QRTIQV+++ IPK +A +
Sbjct: 363 KAPGPQQEKLKGLDADAKFEFAKRKLQESYQHHENAKKQRTIQVLEM--IPKQGSAQKPQ 420
Query: 343 NKGGSSQGRHW 353
K R+W
Sbjct: 421 LKRPGMSNRNW 431
>gi|297806513|ref|XP_002871140.1| hypothetical protein ARALYDRAFT_487303 [Arabidopsis lyrata subsp.
lyrata]
gi|297316977|gb|EFH47399.1| hypothetical protein ARALYDRAFT_487303 [Arabidopsis lyrata subsp.
lyrata]
Length = 436
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 189/438 (43%), Gaps = 100/438 (22%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD +R + D++ ID AI+VA+ D + K RRDKI E L+ +C SRC CD
Sbjct: 7 LDSWREYFRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLF-SCRVSRCIGCD-- 63
Query: 63 NGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIE------------NDNDIID 110
+ E+S DE + A+ D+D ++ + N I+
Sbjct: 64 ------HLELSVPGDDEGNRGRGATGDGGGGTAVDEDYEVGGSKESKANSSRGDSNQIVS 117
Query: 111 PYGGLFDDEQ-------------KRILEIKE-HLEDPDQSEDALIDLLQSLADMDITFKA 156
Y FD+ + K + IKE L D+ L+D L+ L M +
Sbjct: 118 NY--TFDEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDI 175
Query: 157 LKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQ-------PGELASSAM 209
LK T+IG+ VN LRKH S+ +R+L K L+ +WK++VD+WV + E A+ ++
Sbjct: 176 LKSTEIGKAVNGLRKHGSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSV 235
Query: 210 MDGDSPQQKIPQ---------NG---NHQVPDFAYSPNPHNGS--SGSDKNNSEPERKSK 255
+D + +P NG +H + NP N + S ++ P+ +K
Sbjct: 236 VDEEEAFPSLPYDVDIFTPEPNGFEISHFFDSLDFDGNPRNSKEYNTSREHERRPQNIAK 295
Query: 256 QAPLPRKEALSSRPPQSASPA-------------------------APHSVQRPREQK-- 288
+ P + + P +S P+ + H ++P Q+
Sbjct: 296 RKPEGTQMRIQDAPFRSIKPSSDADFDGTRRPLKQNTEQRMKNETVSVHKSEKPMIQRKP 355
Query: 289 -------------ESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKP 335
+ + DAD++ A+++LQE+Y+ ENAK+QRTIQV+++ IPK
Sbjct: 356 VVTEQKRKAPGPQQEKLKGLDADAKFEFAKRKLQESYQHHENAKKQRTIQVLEM--IPKQ 413
Query: 336 KNAFFGKNKGGSSQGRHW 353
+A + K R+W
Sbjct: 414 GSAQKPQLKRPGMSNRNW 431
>gi|413916219|gb|AFW56151.1| hypothetical protein ZEAMMB73_157798 [Zea mays]
Length = 231
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+ +IL I++ LEDPDQSED ++ LLQ+LADMDIT+KAL++TDIGRHVN LRKH S++VR+
Sbjct: 114 ESKILAIRDFLEDPDQSEDDIVSLLQNLADMDITYKALQDTDIGRHVNGLRKHPSSEVRQ 173
Query: 180 LVKHLVRKWKDIVDEWVKL-NQPGELASSAM 209
LVK LVRKWK+IVD+WV+L N G+ + S +
Sbjct: 174 LVKLLVRKWKEIVDDWVRLHNSCGDGSGSII 204
>gi|168060055|ref|XP_001782014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666505|gb|EDQ53157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 11/196 (5%)
Query: 9 ILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYA-TCIASRCRNCDFGNGVVD 67
L AG D+WT ID + +A+ DY EL+ RRD VE+L+A + S+ C D
Sbjct: 380 FLNGAGADIWTVIDNVLDIAATDYPHELRIRRDGFVEKLFAHPALLSKSNGCLPVVACHD 439
Query: 68 V-----NKEISRGQHDEVKAAQQASPSTPHSVNGDDDID-IENDNDIIDPYGGLFDDEQK 121
V +K + +D + S VN ++ D E ND ++ +
Sbjct: 440 VEEAHDDKGVDPPDYDYDHVRTELSDDEDRLVNSTEEYDEAEALNDAMEEEA----RQTL 495
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+L +K+ L D Q E A++ L++L DM I+ +ALK+T+IG+ VN LRKH S VR L
Sbjct: 496 EVLRVKDILADSSQDESAILTALRTLEDMHISVEALKQTEIGKEVNALRKHPSKRVRSLA 555
Query: 182 KHLVRKWKDIVDEWVK 197
K LVR WKD+VDEWVK
Sbjct: 556 KDLVRSWKDLVDEWVK 571
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 240 SSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRE--STFDA 297
+ G + NS P R ++ P+ + P P + QK S+E
Sbjct: 708 AHGISRGNSGPGRPVDRSGPPKAVGNGTVRKFETKPPVPKDNKPKPVQKNSQEPEENVSV 767
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPK--PKNAFFGKNKG 345
+RL A++R+ E Y++E NAKRQR +QVM++ E+PK P+ A G+ G
Sbjct: 768 SARLEVAKRRMHERYEQENNAKRQRVVQVMELTELPKGGPQRAKVGQGHG 817
>gi|356571901|ref|XP_003554109.1| PREDICTED: uncharacterized protein LOC100799367 [Glycine max]
Length = 458
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 116/225 (51%), Gaps = 21/225 (9%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD-- 60
LD++R +A D++ I+ AI+VA+ D E + RRD I ERL+ +C +RC CD
Sbjct: 6 LDEWRKYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDGIAERLF-SCRLTRCVGCDRV 64
Query: 61 -FGNGVVDVNKEISRGQHDEVKAAQQ--------ASPSTPHSVNGDD--DIDIENDNDII 109
G K G D K+ + A S VNGD D+++ + N
Sbjct: 65 ELAVGADSKEKHDGDGDDDNDKSGYERDGVEFEGAGASKESKVNGDGGRDVNLGDSNYSF 124
Query: 110 DPYGGLFDD--EQKR----ILEIKEHLEDP-DQSEDALIDLLQSLADMDITFKALKETDI 162
L D+ E+ R IL I++ L +P D+SE L D L+ L M++T LK T+I
Sbjct: 125 GEAEALSDEMEEESRYVAEILRIRDVLLNPEDESEAVLFDSLRRLQLMELTVDCLKATEI 184
Query: 163 GRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASS 207
G+ VN LRKH S D+R+L + L+ WK++VDEWVK + S
Sbjct: 185 GKAVNPLRKHGSKDIRQLSRTLIDGWKEMVDEWVKATTTTAITGS 229
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 7/57 (12%)
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIPKP---KNAFFGKNKGGSSQGRHW 353
+L + +++LQE+Y++ ENAKRQRTIQVM+I+++PK +N F K G RHW
Sbjct: 401 KLEATKRKLQESYQQAENAKRQRTIQVMEINDLPKQGLHRNTHF---KPG-YHNRHW 453
>gi|356504664|ref|XP_003521115.1| PREDICTED: uncharacterized protein LOC100817835 [Glycine max]
Length = 452
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 23/214 (10%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD++R+ +A D++ I+ AI+VA+ D E + RRD I ERL+ +C +RC CD
Sbjct: 6 LDEWRNYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDWIAERLF-SCRLTRCVGCDRV 64
Query: 63 NGVV--DVNKEISRG----------QHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIID 110
V D KE G + D V+ + A S VNGD ++ + N
Sbjct: 65 ELAVGADSKKEKHDGDDGDNDKSGFERDGVEF-EGAGASKESKVNGD--ANLGDSNYSFG 121
Query: 111 PYGGLFDDEQKR------ILEIKEHLEDP-DQSEDALIDLLQSLADMDITFKALKETDIG 163
L D+ ++ IL IK+ L +P D+SE + + L+ L M++T LK T+IG
Sbjct: 122 EAEALSDEMEEESQYVAEILRIKDVLLNPEDESEAVIFESLRRLQLMELTVDCLKATEIG 181
Query: 164 RHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
+ VN LRKH S D+R+L + L+ WK++VDEWVK
Sbjct: 182 KAVNPLRKHGSKDIRQLARTLINGWKEMVDEWVK 215
>gi|359481563|ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
Length = 521
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 115/231 (49%), Gaps = 41/231 (17%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDF- 61
LD +R+ +TA D++ I+ AILVA+ D E + RRD+I ERL+ +C +RC CD
Sbjct: 8 LDQWRNYFRTANSDIFGIIEHAILVAASDCPKEFRLRRDRIAERLF-SCKLTRCFGCDRV 66
Query: 62 --------GNGV-----VDVNKEIS-------RGQHDEVKAAQQASPSTPHSVNGDDDID 101
G G +DVN R H E+ Q ++ S + D+I+
Sbjct: 67 ELAVPENDGGGCKIEFDMDVNSSSKESKANSIREDHGEMNMNQVSNYSYGEAEALTDEIE 126
Query: 102 IENDNDIIDPYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETD 161
E E RI EI EH D+S+ L D L+ L M ++ LK T+
Sbjct: 127 EETQ----------IAGEVLRIREILEH--SKDESDSVLFDSLRRLQLMVLSVDNLKATE 174
Query: 162 IGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDG 212
IG+ VN LRKH S +R+L + L+ +WKD+VDEWV A++A+ +G
Sbjct: 175 IGKAVNGLRKHGSKQIRQLARTLIDEWKDMVDEWVN-------ATAAIAEG 218
>gi|334185233|ref|NP_001189856.1| transcription elongation factor-like protein [Arabidopsis thaliana]
gi|395406778|sp|F4J4Y5.1|MD26A_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26a
gi|332641439|gb|AEE74960.1| transcription elongation factor-like protein [Arabidopsis thaliana]
Length = 580
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 176/408 (43%), Gaps = 111/408 (27%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
+ LD +R + D++ ID AI+VA+ D+ E K R D+I E L+ +C SRC CD
Sbjct: 8 VSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLF-SCKVSRCIGCD 66
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQ 120
+ E+S + +G + E + +D
Sbjct: 67 --------HLELSIAGDEAAVEIVGVGGGGDRGDSGVATGEGEEASVSVD---------- 108
Query: 121 KRILEIKEHLEDPDQSEDA-LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
++ I++ L + D +D+ L++ L+ L M ++ LK+T+IG+ VN LR+HSS+ + K
Sbjct: 109 -EVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEIGKAVNGLRRHSSDKISK 167
Query: 180 LVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPD----F----- 230
L K L +WK +VD+W +N P E+A + + P++ N V D F
Sbjct: 168 LAKTLFAEWKRLVDQW--MNTPEEMAGT---------EGTPESLNLSVIDEEEAFPSPPH 216
Query: 231 ---AYSPNPHNGSSGS--------DKN-----NSEPERKSKQAP---------------- 258
Y+P P NG S D N S+ ERKS+ +
Sbjct: 217 DLDIYAPEP-NGFELSQILDCLDCDGNPRHSVESKHERKSQSSAGRRPKGTNDANVVGRY 275
Query: 259 ----LPRKEALSSRPPQSASPAAPHSVQRPREQKESRE---------------------- 292
R+E RP + +A V+ R+ K+SRE
Sbjct: 276 CNDQQTRREEADVRPMKH---SATDVVEPKRQTKQSREQMVSAIQRKPTAVTEQKRKLAG 332
Query: 293 ------STFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPK 334
D DS+ A+++LQE+Y + ENAKRQRTIQV++ IPK
Sbjct: 333 PQQDKLKALDPDSKFEFAKRKLQESYHQHENAKRQRTIQVLET--IPK 378
>gi|297829634|ref|XP_002882699.1| hypothetical protein ARALYDRAFT_317880 [Arabidopsis lyrata subsp.
lyrata]
gi|297328539|gb|EFH58958.1| hypothetical protein ARALYDRAFT_317880 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 28/240 (11%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
+ LD++R + D++ ID AI+VA+ D+ E K RRD+I E L+ +C SRC CD
Sbjct: 5 VSLDNWRDYFRRGDSDIFGIIDHAIMVAAADWPNEFKSRRDRIAELLF-SCRVSRCIGCD 63
Query: 61 FGNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQ 120
+ ++E + G V+ V DD E + I+D
Sbjct: 64 HLELSIAGDEEANHGCRT-VETVGGGGDRDDSGVATDDG---EEASVIVDEVM-----RN 114
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
+ IL KE D++E L++ L+ L M ++ LK+T+IG+ VN LR+HSS+ + KL
Sbjct: 115 RDILLNKE-----DETESVLLESLRKLESMSMSVDILKDTEIGKAVNGLRRHSSDKISKL 169
Query: 181 VKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPD--FAYSPNPHN 238
K L +WK +VD+W +N P E+A + + P++ N V D A+ PH+
Sbjct: 170 AKTLFAEWKKLVDQW--MNTPEEMAGT---------EGTPESANLSVIDEEEAFPSPPHD 218
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 249 EPERKSKQAPLPRKEALSSRPP----QSASPAAPHSVQRPREQKESRESTFDADSRLASA 304
EP R+ KQ+ A+ +PP Q A P ++ + D D++ A
Sbjct: 320 EPRRQLKQSREQMVPAIQRKPPIVAKQKRKLAGP---------QQDKLKALDPDAKFEFA 370
Query: 305 RKRLQENYKREENAKRQRTIQVMDIHEIPK 334
+++LQE+Y++ ENAKRQRTIQV++ IPK
Sbjct: 371 KRKLQESYQQHENAKRQRTIQVLET--IPK 398
>gi|302794781|ref|XP_002979154.1| hypothetical protein SELMODRAFT_444137 [Selaginella moellendorffii]
gi|302813676|ref|XP_002988523.1| hypothetical protein SELMODRAFT_447387 [Selaginella moellendorffii]
gi|300143630|gb|EFJ10319.1| hypothetical protein SELMODRAFT_447387 [Selaginella moellendorffii]
gi|300152922|gb|EFJ19562.1| hypothetical protein SELMODRAFT_444137 [Selaginella moellendorffii]
Length = 384
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 185/414 (44%), Gaps = 100/414 (24%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYA-TCIASRCRNCDF 61
++ +R + +G D+W+ ID A+ +A+++Y EL+ RRD E+L+A + NC
Sbjct: 1 MERWRLFFENSGEDLWSVIDWALTIAAVNYPKELRMRRDGFAEKLFAPSNYPLVATNCGG 60
Query: 62 GNGVV-----------DVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIID 110
G ++ D + + +G+ +E A+ +P+ DDD +
Sbjct: 61 GAPLLLAGGSDRKDSLDRDHDDDQGEEEENADARNLAPA-------DDDEE--------- 104
Query: 111 PYGGLFDDEQKRILEIKEHLE-DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQL 169
+ ++ +L I + LE D ++ + L+ ++ L + I+ +ALK T IG VN+L
Sbjct: 105 ------EAVRREVLSIGQTLERDQNEPAEKLLKPIERLEQLQISVQALKVTGIGMIVNKL 158
Query: 170 RK-HSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE-----LASSAMMDGDSPQQKIPQ-- 221
RK H S+ V+ K LV+ WKD+VDEW K + L + A+ + + ++++P
Sbjct: 159 RKHHKSSRVKAGCKKLVKLWKDVVDEWAKTADAADADELALPNEAVNEVEVIEERLPHRV 218
Query: 222 --------------------NG----------------NHQVPDFAYSPNPH----NGSS 241
NG +H+ +Y P+ H NG S
Sbjct: 219 DLLSSSVSSVTQPPPLQMLDNGGEDSMFGCSPSDDREDHHKSHRISYPPSEHSKMLNGPS 278
Query: 242 --GSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADS 299
S K + ++ +AP+ + S+R P + P+ P S Q +
Sbjct: 279 FQPSGKWMDDDRTRTGRAPVAAPSSASARKPPTTKPSRP-SFQ--------ESGSLTEKQ 329
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIP--KPKNAFFGKNKGGSSQGR 351
+L + ++ + + Y++ N KRQRT+QVMD+ ++P +P N K GS R
Sbjct: 330 KLETTKRLIHDQYQQAANVKRQRTVQVMDMQDVPQDRPGNHL----KAGSGNTR 379
>gi|224089941|ref|XP_002308874.1| predicted protein [Populus trichocarpa]
gi|222854850|gb|EEE92397.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 196/482 (40%), Gaps = 139/482 (28%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCI--ASRCRN 58
+ LD +R+ +TA D++ ID AILVA+ D E K RRD+I ERL++ + S C
Sbjct: 4 VSLDYWRNYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSGCNR 63
Query: 59 CDFG-----NGVVDVNKEISRGQHDEVKAAQQ--------------------------AS 87
+ GV D S+ + + +
Sbjct: 64 VELAVPGHDEGVSDDGGCCSKRRDGDNSGGVGGGGDDDDDDDVDIDIDDGGFEYEGGGSK 123
Query: 88 PSTPHSVNGDDDIDIE----NDNDIID-PYG---GLFDDEQK------RILEIKEHLEDP 133
S +S N D+DID ND + + YG L D+ ++ +L IK+ L +
Sbjct: 124 GSKVNSSNRDNDIDNGEVNVNDQLVYNFSYGDAEALTDEIEEVSQTVDEVLRIKDILYNS 183
Query: 134 -DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK--- 189
D+S+ L++ L+ L M +T LK T+IG+ VN LRKH S +R L + L+ WK
Sbjct: 184 QDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNVLRKHGSKQIRYLARTLIEDWKVLV 243
Query: 190 ----------------------DIVDEWVKL------------NQPGELASSAMMDGDSP 215
+VDE L QP + S DG
Sbjct: 244 DEWYSTANAIRGDEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDGMDD 303
Query: 216 QQKIPQNGNHQVPDFAYSPNPH--------------NGSSGSDKNNSEPERKSKQAPLPR 261
P+NG + + P NG++ K+N KS+Q + R
Sbjct: 304 DGN-PRNGGEFIKNRESGQRPSVEKQNFAKQKQHTPNGANVLSKDN-----KSQQ--MRR 355
Query: 262 KEAL-SSRPPQSASPAAPHSVQRPREQKESRESTF------------------------- 295
+EA+ + P +A+ + + EQK ++E
Sbjct: 356 QEAIVKASKPSNANSGPGRPLMQNVEQKMNQEPQLIRKTDKITSQRKPPTGQQDKLKNSD 415
Query: 296 --DADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNK--GGSSQGR 351
D +L + +++LQE Y++ ENAKRQRTIQVM++H++ PK + KN+ +Q R
Sbjct: 416 EVDVQMKLEATKRKLQERYQQAENAKRQRTIQVMELHDL--PKQGYVQKNQPIRPGNQNR 473
Query: 352 HW 353
HW
Sbjct: 474 HW 475
>gi|255552481|ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
gi|223543547|gb|EEF45077.1| conserved hypothetical protein [Ricinus communis]
Length = 473
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 115/238 (48%), Gaps = 48/238 (20%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
+ LD +R+ +TA D++ ID AI+VA+ D E + RRD+I ERL+ +C +RC C+
Sbjct: 4 VSLDYWRNYFRTANSDIFAIIDHAIMVAASDCPKEFRLRRDRIAERLF-SCRLTRCSGCN 62
Query: 61 FGNGVVDVNKEISRGQHD--------------------------EVKAAQQASPSTPHSV 94
VD+ G++D E +A + S +S
Sbjct: 63 H----VDLAVPAHEGENDDGGACKRRDDHHVEDDDDDDVDIDVCEFEAGGTSKESKVNSS 118
Query: 95 NGDDDIDIE----NDNDII---DPYG---GLFDDEQKR------ILEIKE-HLEDPDQSE 137
N DD DI+ N ND + YG L D+ ++ +L IK+ L D+SE
Sbjct: 119 NNRDDNDIDIGEVNVNDQLLSNFSYGEAEALTDEIEEESMVVGEVLRIKDILLHSRDESE 178
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEW 195
L + L+ L M +T LK T+IG+ VN LRKH S +R L + L+ WK +VDEW
Sbjct: 179 SVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSQQIRHLARVLIDGWKVLVDEW 236
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRHW 353
+L + +++LQE Y++ ENAKRQRTIQVM++H++PK N S RHW
Sbjct: 412 KLEATKRKLQERYQQAENAKRQRTIQVMELHDLPKQALVQKNPNMRPGSHNRHW 465
>gi|357509283|ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499945|gb|AES81148.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 444
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 16/217 (7%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD +RS +++ D++ ID AI+VA+ D E K RRD I ERL++ + +RC+ C+
Sbjct: 6 LDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVML-NRCKGCEKV 64
Query: 63 NGVV---DVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDI---------DIENDNDIID 110
V D E+ + A++++ NG D + E D ++
Sbjct: 65 ELSVPDDDNGDELCKRSSVREGASKESKVDCSREENGVMDANPISNYSFGEAEALTDELE 124
Query: 111 PYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLR 170
L E RI EI + ED +S+ L + L+ L M + LK T+IG+ VN LR
Sbjct: 125 EQSQLVA-EVTRIKEILNNHED--ESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLR 181
Query: 171 KHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASS 207
KH S D+R+L + L+ WK++V+ WVK +A+S
Sbjct: 182 KHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAAS 218
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 269 PPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
PP+ + P +RP ++ + D ++L + ++RLQE+Y++ ENAKRQRTIQVM+
Sbjct: 358 PPKIENSTVP---KRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRTIQVME 414
Query: 329 IHEIPK 334
I+++PK
Sbjct: 415 INDLPK 420
>gi|255647376|gb|ACU24154.1| unknown [Glycine max]
Length = 336
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 25/217 (11%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD +R+ A D++ ID AI+VA+ D E RRD I ERL+ +C SRC C+
Sbjct: 8 LDYWRNYFGAANSDIFGIIDHAIMVAASDCPKEFTLRRDGIAERLF-SCRLSRCLGCERV 66
Query: 63 NGVVDVN----------KEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPY 112
V V+ K G DE K +A S VN D E + + + Y
Sbjct: 67 ELAVPVDDDDDGGGEGCKSGFDGDGDEFKF--EAGASKESKVNSARDYPGEMNTNQVSNY 124
Query: 113 G-----GLFDDEQKR------ILEIKE-HLEDPDQSEDALIDLLQSLADMDITFKALKET 160
L D+ +K + IK+ L ++S+ L D L+ L M++T LK T
Sbjct: 125 SYGEAEALTDEIEKESQYVEEVFRIKDIFLNYEEESDTVLFDSLRRLQLMELTVDLLKAT 184
Query: 161 DIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
+IG+ VN LRKH S D+ +L + L+ WK +VDEWVK
Sbjct: 185 EIGKAVNPLRKHGSRDICQLARTLIDGWKQMVDEWVK 221
>gi|357509279|ref|XP_003624928.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499943|gb|AES81146.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 447
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 16/217 (7%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD +RS +++ D++ ID AI+VA+ D E K RRD I ERL++ + +RC+ C+
Sbjct: 9 LDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVML-NRCKGCEKV 67
Query: 63 NGVV---DVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDI---------DIENDNDIID 110
V D E+ + A++++ NG D + E D ++
Sbjct: 68 ELSVPDDDNGDELCKRSSVREGASKESKVDCSREENGVMDANPISNYSFGEAEALTDELE 127
Query: 111 PYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLR 170
L E RI EI + ED +S+ L + L+ L M + LK T+IG+ VN LR
Sbjct: 128 EQSQLVA-EVTRIKEILNNHED--ESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLR 184
Query: 171 KHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASS 207
KH S D+R+L + L+ WK++V+ WVK +A+S
Sbjct: 185 KHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAAS 221
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 269 PPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
PP+ + P +RP ++ + D ++L + ++RLQE+Y++ ENAKRQRTIQVM+
Sbjct: 361 PPKIENSTVP---KRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRTIQVME 417
Query: 329 IHEIPK 334
I+++PK
Sbjct: 418 INDLPK 423
>gi|388520529|gb|AFK48326.1| unknown [Medicago truncatula]
Length = 451
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 16/217 (7%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD +RS +++ D++ ID AI+VA+ D E K RRD I ERL++ + +RC+ C+
Sbjct: 9 LDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVML-NRCKGCEKV 67
Query: 63 NGVV---DVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDI---------DIENDNDIID 110
V D E+ + A++++ NG D + E D ++
Sbjct: 68 ELSVPDDDNGDELCKRSSVREGASKESKVDCSREENGVMDANPISNYSFGEAEALTDELE 127
Query: 111 PYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLR 170
L E RI EI + ED +S+ L + L+ L M + LK T+IG+ VN LR
Sbjct: 128 EQSQLVA-EVTRIKEILNNHED--ESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLR 184
Query: 171 KHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASS 207
KH S D+R+L + L+ WK++V+ WVK +A+S
Sbjct: 185 KHGSKDIRQLARTLIDGWKELVNAWVKATTTTPVAAS 221
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 269 PPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
PP+ + P +RP ++ + D ++L + ++RLQE+Y++ ENAKRQRTIQVM+
Sbjct: 365 PPKIENSTVP---KRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRTIQVME 421
Query: 329 IHEIPK 334
I+++PK
Sbjct: 422 INDLPK 427
>gi|357509281|ref|XP_003624929.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499944|gb|AES81147.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 467
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 14/206 (6%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD +RS +++ D++ ID AI+VA+ D E K RRD I ERL++ + +RC+ C+
Sbjct: 9 LDQWRSYFRSSNSDIFDIIDHAIVVAASDCPKEFKSRRDGIAERLFSVML-NRCKGCEKV 67
Query: 63 NGVV---DVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDID-IENDNDIIDPYGGLFDD 118
V D E+ + A++++ NG D + I N + L D+
Sbjct: 68 ELSVPDDDNGDELCKRSSVREGASKESKVDCSREENGVMDANPISNYS--FGEAEALTDE 125
Query: 119 --EQKRIL----EIKEHLED-PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRK 171
EQ +++ IKE L + D+S+ L + L+ L M + LK T+IG+ VN LRK
Sbjct: 126 LEEQSQLVAEVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRK 185
Query: 172 HSSNDVRKLVKHLVRKWKDIVDEWVK 197
H S D+R+L + L+ WK++V+ WVK
Sbjct: 186 HGSKDIRQLARTLIDGWKELVNAWVK 211
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 269 PPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
PP+ + P +RP ++ + D ++L + ++RLQE+Y++ ENAKRQRTIQVM+
Sbjct: 381 PPKIENSTVP---KRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRTIQVME 437
Query: 329 IHEIPK 334
I+++PK
Sbjct: 438 INDLPK 443
>gi|449437690|ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Cucumis sativus]
Length = 452
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 114/213 (53%), Gaps = 19/213 (8%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD-- 60
LD +R+ + A D++ ID AILVA+ D E + RRD+I E+L+ +C +RC CD
Sbjct: 8 LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLF-SCRLTRCLGCDRV 66
Query: 61 --FGNGVVDVNKEISRGQHDEVK--AAQQASPSTPHSV-NGDDDIDIENDNDIIDPYGG- 114
G +D + + + D V+ +A S V + DDI N N + + G
Sbjct: 67 ELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSFGE 126
Query: 115 ---LFDD-EQK-----RILEIKEHLED-PDQSEDALIDLLQSLADMDITFKALKETDIGR 164
L D+ EQ+ +L IKE L + D+S+ L + L+ L M ++ L+ T+IG+
Sbjct: 127 AEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGK 186
Query: 165 HVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
VN LRKH S +R L + L+ +WK++VD WV+
Sbjct: 187 AVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQ 219
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 32/35 (91%)
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIPK 334
+L + +++LQE+Y++ ENAK+QRTIQVM++H++PK
Sbjct: 394 KLEATKRKLQESYQQAENAKKQRTIQVMELHDLPK 428
>gi|6630548|gb|AAF19567.1|AC011708_10 hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
+ LD +R + D++ ID AI+VA+ D+ E K R D+I E L+ +C SRC CD
Sbjct: 8 VSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLF-SCKVSRCIGCD 66
Query: 61 F-------GNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYG 113
V++ G + A SV+
Sbjct: 67 HLELSIAGDEAAVEIVGVGGGGDRGDSGVATGEGEEASVSVD------------------ 108
Query: 114 GLFDDEQKRILEIKEHLEDPDQSEDA-LIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
++ I++ L + D +D+ L++ L+ L M ++ LK+T+IG+ VN LR+H
Sbjct: 109 --------EVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEIGKAVNGLRRH 160
Query: 173 SSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASS 207
SS+ + KL K L +WK +VD+W +N P E+A +
Sbjct: 161 SSDKISKLAKTLFAEWKRLVDQW--MNTPEEMAGT 193
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 249 EPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRL 308
EP+R++KQ+ A+ +P +A + P++ K D DS+ A+++L
Sbjct: 322 EPKRQTKQSREQMVSAIQRKP--TAVTEQKRKLAGPQQDKLK---ALDPDSKFEFAKRKL 376
Query: 309 QENYKREENAKRQRTIQVMDIHEIPK 334
QE+Y + ENAKRQRTIQV++ IPK
Sbjct: 377 QESYHQHENAKRQRTIQVLET--IPK 400
>gi|224139692|ref|XP_002323230.1| predicted protein [Populus trichocarpa]
gi|222867860|gb|EEF04991.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 185/469 (39%), Gaps = 119/469 (25%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCI--ASRCRN 58
+ LD +R +TA D++ ID AILVA+ D E K RRD+I ERL++ + S C
Sbjct: 4 VSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSGCNQ 63
Query: 59 CDFGNGVVDVNKEISRGQHDEVKAAQQ-------------------------ASPSTPHS 93
+ D ++ RG + + + S +S
Sbjct: 64 VELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGSKESKVNS 123
Query: 94 VNGDDDID---IENDNDIIDPYG-----GLFDDEQK------RILEIKEHLEDP-DQSED 138
N D+D D + ++ ++ + L D+ ++ +L IK+ L + D+S+
Sbjct: 124 SNRDNDFDNGEVNVNDQLVSNFSFGEAEALTDEIEEVSQTVDEVLRIKDILYNSQDESDS 183
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV-------KHLVRKWKD- 190
L++ L+ L M +T LK T+IG+ VN LRKH S +R L K LV +W
Sbjct: 184 VLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEDWKVLVDEWYSA 243
Query: 191 -----------------IVDEWVKL------------NQPGELASSAMMDGDSPQQKIPQ 221
+VDE L QP + S DG
Sbjct: 244 ANVIRGNEGTPDSVNPSVVDEEEGLPSPPLDEGAFFATQPTSMELSQFFDGMDDDGNPRN 303
Query: 222 NG----NH------------------QVPDFAYSPNPHNGSSGSDKN------------N 247
NG NH Q P A P+ N S K N
Sbjct: 304 NGEFIKNHVSRRRPSAENQNISKQKQQTPKGANMPSKDNESQQMRKQEDVVKASKPSNAN 363
Query: 248 SEPERKSKQ---APLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASA 304
S P R KQ + ++ L + + S P + Q+ + K S E +L +
Sbjct: 364 SGPGRPLKQNVEQKMNQETVLIRKTDKVTSQRKPPTGQQDK-LKSSDEVAVQM--KLEAT 420
Query: 305 RKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRHW 353
+++LQE Y++ E AKRQRTIQVM++H++PK + + + RHW
Sbjct: 421 KRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQKNQPMRLGNHNRHW 469
>gi|186509965|ref|NP_187693.2| transcription elongation factor-like protein [Arabidopsis thaliana]
gi|332641438|gb|AEE74959.1| transcription elongation factor-like protein [Arabidopsis thaliana]
Length = 288
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 111/245 (45%), Gaps = 46/245 (18%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDF- 61
LD +R + D++ ID AI+VA+ D+ E K R D+I E L+ +C SRC CD
Sbjct: 10 LDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLF-SCKVSRCIGCDHL 68
Query: 62 ------GNGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGL 115
V++ G + A SV
Sbjct: 69 ELSIAGDEAAVEIVGVGGGGDRGDSGVATGEGEEASVSV--------------------- 107
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
DE RI +I + +D + + L++ L+ L M ++ LK+T+IG+ VN LR+HSS+
Sbjct: 108 --DEVMRIRDILSNKDD--EKDSVLLESLRKLESMSMSVDILKDTEIGKAVNGLRRHSSD 163
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPD--FAYS 233
+ KL K L +WK +VD+W +N P E+A + + P++ N V D A+
Sbjct: 164 KISKLAKTLFAEWKRLVDQW--MNTPEEMAGT---------EGTPESLNLSVIDEEEAFP 212
Query: 234 PNPHN 238
PH+
Sbjct: 213 SPPHD 217
>gi|227438273|gb|ACP30626.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1276
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 67/94 (71%)
Query: 111 PYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLR 170
P+ L DD +K IL+I+E LEDPD SE+AL++LLQ L +DIT K L+ ++IGR VN ++
Sbjct: 966 PFATLCDDRKKSILKIQEKLEDPDLSEEALVELLQKLEYVDITLKDLQGSNIGRLVNLVQ 1025
Query: 171 KHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGEL 204
+ + + ++L + L++KWK+ V++ + QP +L
Sbjct: 1026 RRRTGNAKRLAQQLIKKWKETVEKTLTDKQPSDL 1059
>gi|224139684|ref|XP_002323227.1| predicted protein [Populus trichocarpa]
gi|222867857|gb|EEF04988.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 42/237 (17%)
Query: 1 MDLDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCI--ASRCRN 58
+ LD +R +TA D++ ID AILVA+ D E K RRD+I ERL++ + S C
Sbjct: 4 VSLDYWRDYFRTASSDIFGIIDHAILVAASDCPKEFKLRRDRIAERLFSCRLIKCSGCNQ 63
Query: 59 CDFGNGVVDVNKEISRGQHDEVKAAQQ-------------------------ASPSTPHS 93
+ D ++ RG + + + S +S
Sbjct: 64 VELAVPGHDEDERDDRGCCSKRRDGDNSGSDDDEEEVDIDIDDGGFEYEGGGSKESKVNS 123
Query: 94 VNGDDDID---IENDNDIIDPYG-----GLFDDEQK------RILEIKEHLEDP-DQSED 138
N D+D D + ++ ++ + L D+ ++ +L IK+ L + D+S+
Sbjct: 124 SNRDNDFDNGEVNVNDQLVSNFSFGEAEALTDEIEEVSQTVDEVLRIKDILYNSQDESDS 183
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEW 195
L++ L+ L M +T LK T+IG+ VN LRKH S +R L + L+ WK +VDEW
Sbjct: 184 VLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSEQIRHLARTLIEDWKVLVDEW 240
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRHW 353
+L + +++LQE Y++ E AKRQRTIQVM++H++PK + + + RHW
Sbjct: 422 KLEATKRKLQERYQQAEKAKRQRTIQVMELHDLPKQGHVQKNQPMRLGNHNRHW 475
>gi|357133677|ref|XP_003568450.1| PREDICTED: uncharacterized protein LOC100834194 [Brachypodium
distachyon]
Length = 535
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 106/257 (41%), Gaps = 63/257 (24%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVER----LYAT------CI 52
LD +R + AGV + I+ AILVA+ D E RRD+I ER + AT C
Sbjct: 5 LDRWRDFFRGAGVGICEVIEKAILVAAADQPEEFLRRRDRIAERLFNAVLATRPSSHGCT 64
Query: 53 ASRCRNCDFGNGVVDVNKEISRGQHDEVK-------AAQQASPSTPHSV----------- 94
S VV+ + R E K A + P H V
Sbjct: 65 GSTLSVLPATPAVVEDKGSVRRVPEKESKVDSSSLGAPGRGLPLPNHEVEDSDSDSEDDE 124
Query: 95 ------------NGDDDIDI----------------ENDNDIIDPYGGL---FDDEQ--- 120
N DDD + E+D+ D L D+E
Sbjct: 125 RLRRAAACNYGHNYDDDNEEEEEEQAAATQEEDGHPEDDHAAADELEALTNEMDEESQIV 184
Query: 121 KRILEIKEHL-EDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+ +L IKE L D S+ L + L+ L M ++ L+ T+IGR VN LRKH+S +R
Sbjct: 185 REVLRIKELLLHKQDHSDSTLFESLRRLQLMQLSVSTLQATEIGRAVNGLRKHNSQQIRH 244
Query: 180 LVKHLVRKWKDIVDEWV 196
LV+ L++ WK +VDEWV
Sbjct: 245 LVQTLIQDWKILVDEWV 261
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 11/74 (14%)
Query: 267 SRPPQSASPAAPHSVQRPREQKESRESTFD---ADSRLASARKRLQENYKREENAKRQRT 323
SRPP +S +P+ T+D ++ RL A+++LQE Y+ ENAK+QRT
Sbjct: 449 SRPPVQSSAGVRLESAKPK--------TYDGLESNGRLEVAKRKLQERYQEAENAKKQRT 500
Query: 324 IQVMDIHEIPKPKN 337
IQVM++ +IPKPKN
Sbjct: 501 IQVMELGDIPKPKN 514
>gi|17065422|gb|AAL32865.1| Unknown protein [Arabidopsis thaliana]
gi|20148541|gb|AAM10161.1| unknown protein [Arabidopsis thaliana]
Length = 268
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 63/265 (23%)
Query: 150 MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQ-------PG 202
M + LK T+IG+ VN LRKHSS+ +R+L K L+ +WK++VD+WV +
Sbjct: 1 MSLNVDILKSTEIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTP 60
Query: 203 ELASSAMMDGDSPQQKIPQ---------NG---NHQVPDFAYSPNPHNGS--SGSDKNNS 248
E A+ +++D + +P NG +H + NP N + S ++
Sbjct: 61 ESANPSVLDEEEAFPSLPYDVDIFTPEPNGFEISHFFDSLDFDGNPRNSEEHNTSREHER 120
Query: 249 EPERKSKQAPLPRKEALSSRPPQSASPAAP-------------------------HSVQR 283
P+ +K+ P + + P +S P++ H ++
Sbjct: 121 RPQNIAKRKPEGTQMRIQDAPFRSIKPSSATDFDGTRRPVKQSTEQRMKNETVSVHKSEK 180
Query: 284 PREQK---------------ESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
P Q+ + + DAD++ A+++LQE+Y+ ENAK+QRTIQV++
Sbjct: 181 PMIQRKPVVTEQKRKAPGPQQEKLKGLDADAKFEFAKRKLQESYQHHENAKKQRTIQVLE 240
Query: 329 IHEIPKPKNAFFGKNKGGSSQGRHW 353
+ IPK +A + K R+W
Sbjct: 241 M--IPKQGSAQKPQLKRPGMSNRNW 263
>gi|308079985|ref|NP_001183065.1| uncharacterized protein LOC100501416 [Zea mays]
gi|238009160|gb|ACR35615.1| unknown [Zea mays]
gi|413955651|gb|AFW88300.1| hypothetical protein ZEAMMB73_008462 [Zea mays]
Length = 279
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD +R A ++ ID AI VA+ D+ L+ RRD I ERLY +A
Sbjct: 11 LDYWRCFFSGARASIFDAIDAAIRVAAADHPDALRARRDAIAERLYTAIVA--------- 61
Query: 63 NGVVDVNKEISRGQHDEVKAA---QQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDE 119
+ +E + GQ + A + + S P S+ D ++ N++ P DD
Sbjct: 62 ---LPATQE-APGQSTPGQPALLLPEGAASVP-SLCSSDRAEVVNNDGGGAPLTNSDDDV 116
Query: 120 QKRILEIKEHLEDP-DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
IK L + D+SE L++LL L ++ T A++ T IG V LRKH S +R
Sbjct: 117 VAEAFRIKAALSNAQDKSEAELLELLGRLGQLEFTVDAIRATGIGMDVRPLRKHGSKQIR 176
Query: 179 KLVKHLVRKWKDIVDEWVKLNQP 201
+LV+ L+ W V+EW+ P
Sbjct: 177 QLVRSLIEGWTATVNEWMNNGDP 199
>gi|302772344|ref|XP_002969590.1| hypothetical protein SELMODRAFT_440817 [Selaginella moellendorffii]
gi|300163066|gb|EFJ29678.1| hypothetical protein SELMODRAFT_440817 [Selaginella moellendorffii]
Length = 918
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 116 FDDEQKRILEI---KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
++E +RI EI K + ED L + L+ L M I+F+ALK T+IGR VN LRKH
Sbjct: 166 MEEESRRIKEINRIKNQISHFADEEDYLCEALERLESMHISFEALKATEIGRPVNNLRKH 225
Query: 173 SSNDVRKLVKHLVRKWKDIVDEWVK 197
S VR +VK LV WK + +EW K
Sbjct: 226 PSLRVRSIVKRLVSGWKTLAEEWTK 250
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYA 49
+D ++S +++G D+WT ID AI +A+++ EL+ RRDK E+++
Sbjct: 1 MDKWKSFFQSSGSDIWTVIDRAITIAAVEQPGELRARRDKFTEKMFC 47
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRH 352
+LA+A+++L E YK+ E+AK+QRT+QVM++ ++PK K GSS+ H
Sbjct: 487 KLAAAKRKLHEGYKQAEHAKKQRTVQVMELTDLPKGKGGPKAAKASGSSKLHH 539
>gi|32492337|emb|CAE05477.1| OSJNBa0006A01.23 [Oryza sativa Japonica Group]
gi|39545853|emb|CAE03931.3| OSJNba0093F12.5 [Oryza sativa Japonica Group]
Length = 495
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 45/57 (78%), Gaps = 3/57 (5%)
Query: 124 LEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
L+I++ E P ED L+ LLQSLADMDIT+KAL+ETDIGRHVN LRKH S +VR L
Sbjct: 378 LKIRDLYEQP---EDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLL 431
>gi|302774887|ref|XP_002970860.1| hypothetical protein SELMODRAFT_441268 [Selaginella moellendorffii]
gi|300161571|gb|EFJ28186.1| hypothetical protein SELMODRAFT_441268 [Selaginella moellendorffii]
Length = 915
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 116 FDDEQKRILEI---KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
++E +RI EI K + ED L + L+ L M I+F+ALK T+IGR VN LRKH
Sbjct: 166 MEEESRRIKEINRIKNQISHFADEEDYLCEALERLESMHISFEALKATEIGRPVNNLRKH 225
Query: 173 SSNDVRKLVKHLVRKWKDIVDEWVK 197
S VR +VK LV WK + +EW K
Sbjct: 226 PSLRVRSIVKRLVSGWKTLAEEWTK 250
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYA 49
+D ++S +++G D+WT ID AI +A+++ EL+ RRDK E+++
Sbjct: 1 MDKWKSFFQSSGSDIWTVIDRAITIAAVEQPAELRARRDKFTEKMFC 47
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 267 SRPPQSASP---AAPHSV-QRPREQKESRESTFDADS-RLASARKRLQENYKREENAKRQ 321
S+P S++P A+ SV +R + K S S + +LA+A+++L E YK+ E+AK+Q
Sbjct: 448 SKPKSSSTPLPSASKRSVDERIQSCKMSSSSKAGGSTDKLAAAKRKLHEGYKQAEHAKKQ 507
Query: 322 RTIQVMDIHEIPKPKNA 338
RT+QVM++ ++PK K
Sbjct: 508 RTVQVMELTDLPKGKGG 524
>gi|242040837|ref|XP_002467813.1| hypothetical protein SORBIDRAFT_01g034540 [Sorghum bicolor]
gi|241921667|gb|EER94811.1| hypothetical protein SORBIDRAFT_01g034540 [Sorghum bicolor]
Length = 437
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD +R A ++ ID AI VA+ D+ L+ RRD I ERLY IA G
Sbjct: 12 LDYWRGFFSGARASIFDAIDAAIRVAAADHPDALRARRDAIAERLYTALIALPAPEAPPG 71
Query: 63 NGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKR 122
+ +RGQ + + A S P + D ++D+ + + +
Sbjct: 72 HP--------TRGQPPLLLLPEGAG-SVPSLCSSDRAESDDDDDVVAEAF---------- 112
Query: 123 ILEIKEHLEDP-DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+K L + D+SE L++LL L ++ T A++ T+IG V LRKH S +R+LV
Sbjct: 113 --RVKAALSNAQDKSEAELLELLGRLGQLEFTVDAIRATEIGMAVKPLRKHGSKQIRQLV 170
Query: 182 KHLVRKWKDIVDEWV 196
+ L+ WK V+EWV
Sbjct: 171 RSLIEGWKATVNEWV 185
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
D++L + +++LQE Y+ NAK+QRTIQ++D ++PK N
Sbjct: 372 DAKLEATKRKLQEGYQEFNNAKKQRTIQMVDPQDLPKQGN 411
>gi|326495800|dbj|BAJ85996.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509413|dbj|BAJ91623.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518852|dbj|BAJ92587.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 9/106 (8%)
Query: 123 ILEIKEHL-EDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+L IKE L D S+ L D L+ L M ++ LK T+IGR VN LRKHSS +R LV
Sbjct: 191 VLRIKELLLHKQDHSDTTLFDSLRRLQLMQLSVSTLKATEIGRAVNGLRKHSSQQIRHLV 250
Query: 182 KHLVRKWKDIVDEWVKL-------NQPGELASSAMMDGDSPQQKIP 220
+ L+ WK +VDEWV N PG ++ +++D D ++ +P
Sbjct: 251 QTLIDDWKILVDEWVSTTNVALADNSPG-TSNPSVVDDDEEEEGLP 295
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 276 AAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKP 335
A P + R K + +++ RL +A++RLQE Y+ ENAK+QRTIQVM++ +IPKP
Sbjct: 459 AQPSAGVRLESAKPKTQDGLESNGRLEAAKRRLQERYQEAENAKKQRTIQVMELGDIPKP 518
Query: 336 KN 337
K+
Sbjct: 519 KS 520
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIAS-RCRNCDF 61
LD +R + AGV + I+ AILVA+ D E RRD+I ERL+ +A C C
Sbjct: 6 LDRWRGFFRGAGVGICEVIEKAILVAAADEPQEFLRRRDRIAERLFNALLARPSCHGCTA 65
Query: 62 GNGVV 66
G V
Sbjct: 66 STGSV 70
>gi|224033281|gb|ACN35716.1| unknown [Zea mays]
Length = 168
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 285 REQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNK 344
R +E + + D++ +L SARKRLQENY+ +NAK+QRTIQVMDIH+IPKPKN K
Sbjct: 98 RAIREQKNTLLDSE-KLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNTFVRK 156
Query: 345 GGSSQG 350
GSS G
Sbjct: 157 SGSSAG 162
>gi|449531689|ref|XP_004172818.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like, partial [Cucumis sativus]
Length = 207
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 29/206 (14%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNC--- 59
LD +R+ + A D++ ID AILVA+ D E + RRD+I E+L+ +C +RC C
Sbjct: 8 LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLF-SCRLTRCLGCDRV 66
Query: 60 --------DFGNGVVDVNKEISR-GQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIID 110
D +G + +R G E ++++ + DDI N N + +
Sbjct: 67 ELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSR-----DDIGEMNCNRVSN 121
Query: 111 PYGG----LFDD-EQK-----RILEIKEHLED-PDQSEDALIDLLQSLADMDITFKALKE 159
G L D+ EQ+ +L IKE L + D+S+ L + L+ L M ++ L+
Sbjct: 122 FSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQA 181
Query: 160 TDIGRHVNQLRKHSSNDVRKLVKHLV 185
T+IG+ VN LRKH S +R L + L+
Sbjct: 182 TEIGKAVNCLRKHGSKRIRHLARVLI 207
>gi|223974385|gb|ACN31380.1| unknown [Zea mays]
Length = 149
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 285 REQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPK--NAFFGK 342
R +E + + D++ +L SARKRLQENY+ +NAK+QRTIQVMDIH+IPKPK N F K
Sbjct: 80 RAIREQKNTLLDSE-KLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNTFVRK 138
Query: 343 NKGGSSQGRH 352
+ GG +H
Sbjct: 139 SGGGGFPAKH 148
>gi|51038233|gb|AAT94036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 516
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 123 ILEIKE-HLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+L IK+ L D S+ L + L+ L M ++ LK T+IGR VN LRKH+S +R LV
Sbjct: 184 VLRIKDLFLHKEDHSDATLFESLRRLQLMQLSVSTLKATEIGRAVNGLRKHNSQQIRHLV 243
Query: 182 KHLVRKWKDIVDEWVKL-------NQPGELASSAMMDGD 213
+ L+ WK +VDEWV N PG +S + D D
Sbjct: 244 RTLIEGWKILVDEWVSTTNVALTDNSPGSSKTSVVDDAD 282
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 3 LDDFRSILKTAG--VDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
LD +R +L+ A + I+ AILVA+ D EL RRD+I E L+ A R C
Sbjct: 5 LDRWRELLRGAAGSAGICDVIENAILVAAADAPQELLRRRDRICEILF---TAPRAPPCH 61
Query: 61 FGNG 64
G G
Sbjct: 62 HGCG 65
>gi|125552338|gb|EAY98047.1| hypothetical protein OsI_19963 [Oryza sativa Indica Group]
Length = 516
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 123 ILEIKE-HLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+L IK+ L D S+ L + L+ L M ++ LK T+IGR VN LRKH+S +R LV
Sbjct: 184 VLRIKDLFLHKEDHSDATLFESLRRLQLMQLSVSTLKATEIGRAVNGLRKHNSQQIRHLV 243
Query: 182 KHLVRKWKDIVDEWVKL-------NQPGELASSAMMDGD 213
+ L+ WK +VDEWV N PG +S + D D
Sbjct: 244 RTLIEGWKILVDEWVSTTNVALTDNSPGSSKTSVVDDAD 282
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 3 LDDFRSILKTAG--VDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
LD +R +L+ A + I+ AILVA+ D EL RRD+I E L+ A R C
Sbjct: 5 LDRWRELLRGAAGSAGICDVIENAILVAAADAPQELLRRRDRICEILF---TAPRAPPCH 61
Query: 61 FGNG 64
G G
Sbjct: 62 HGCG 65
>gi|297741674|emb|CBI32806.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
RI EI EH +D +S+ L D L+ L M ++ LK T+IG+ VN LRKH S +R+L
Sbjct: 48 RIREILEHSKD--ESDSVLFDSLRRLQLMVLSVDNLKATEIGKAVNGLRKHGSKQIRQLA 105
Query: 182 KHLVRKWKDIVDEWVKLNQPGELASSAMMDG 212
+ L+ +WKD+VDEWV A++A+ +G
Sbjct: 106 RTLIDEWKDMVDEWVN-------ATAAIAEG 129
>gi|413949275|gb|AFW81924.1| hypothetical protein ZEAMMB73_707404 [Zea mays]
Length = 535
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 92 HSVNGDDDIDIENDNDIIDPYGGLFDDEQK---RILEIKEHL-EDPDQSEDALIDLLQSL 147
H+ + ++ + ++D + ++ D+E + +L IKE L D S+ L D L+ L
Sbjct: 152 HAADDTEEGEEDHDAEELEALTNEIDEESQIVGEVLRIKELLLHKEDHSDATLFDSLRRL 211
Query: 148 ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
M ++ LK T+IGR VN+LRKH+S ++R LV L+ WK +VDEWV
Sbjct: 212 QLMQLSVSTLKATEIGRAVNRLRKHNSREIRHLVCTLIEGWKVLVDEWV 260
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 267 SRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQV 326
SRP S A + +P+ + D + +L +A++RLQE Y+ ENAKRQRTIQV
Sbjct: 448 SRPGARPSAGAKLELAKPKVYDDG----LDNNRKLEAAKRRLQERYQEAENAKRQRTIQV 503
Query: 327 MDIHEIPKPKN 337
M++ +IPKPKN
Sbjct: 504 MELGDIPKPKN 514
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATC 51
LD +R + AG + I+ AILVA+ D + RRD+I ERL+
Sbjct: 5 LDRWRGFFRGAGAGICDVIENAILVAAADAPRDFLHRRDRIAERLFTAL 53
>gi|297729327|ref|NP_001177027.1| Os12g0582600 [Oryza sativa Japonica Group]
gi|255670430|dbj|BAH95755.1| Os12g0582600, partial [Oryza sativa Japonica Group]
Length = 194
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 38/46 (82%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
+ ED L+ LLQSLADMDI +KAL+ETDIGRHVN LRKH S +VR L
Sbjct: 85 EPEDELLSLLQSLADMDIPYKALQETDIGRHVNGLRKHPSGEVRLL 130
>gi|222631595|gb|EEE63727.1| hypothetical protein OsJ_18545 [Oryza sativa Japonica Group]
Length = 469
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 123 ILEIKE-HLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+L IK+ L D S+ L + L+ L M ++ LK T+IGR VN LRKH+S +R LV
Sbjct: 137 VLRIKDLFLHKEDHSDATLFESLRRLQLMQLSVSTLKATEIGRAVNGLRKHNSQQIRHLV 196
Query: 182 KHLVRKWKDIVDEWVKL-------NQPGELASSAMMDGD 213
+ L+ WK +VDEWV N PG +S + D D
Sbjct: 197 RTLIEGWKILVDEWVSTTNVALTDNSPGSSKTSVVDDAD 235
>gi|20043009|gb|AAM08817.1|AC090486_27 Putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|20303624|gb|AAM19051.1|AC099774_13 putative transcription factor [Oryza sativa Japonica Group]
gi|125574379|gb|EAZ15663.1| hypothetical protein OsJ_31076 [Oryza sativa Japonica Group]
Length = 276
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 53/193 (27%)
Query: 136 SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEW 195
S +A+++LL++L + +TF+ L+ + IG+ ++ LRKHSS VR L L + WK +VDE
Sbjct: 103 SSEAVVELLRALQAVPMTFETLEASKIGKAISGLRKHSSEQVRDLAAALYKSWKALVDEH 162
Query: 196 VKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSK 255
+ P +A G + +H ++K N+
Sbjct: 163 LTRKPPAPPTKTASALGAA---------DH-----------------ANKANTA------ 190
Query: 256 QAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKRE 315
PRK A + R + A AP D +++L +ARK+L+E Y+ E
Sbjct: 191 ---APRKAACNKR--KEAPALAPE---------------MD-EAKLEAARKKLRERYRDE 229
Query: 316 ENAKRQRTIQVMD 328
E AK+QR IQV+D
Sbjct: 230 ETAKKQRKIQVID 242
>gi|77556896|gb|ABA99692.1| hypothetical protein LOC_Os12g39290 [Oryza sativa Japonica Group]
Length = 142
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
ED L+ LLQSLADMDI +KAL+ETDIGRHVN LRKH S +VR L
Sbjct: 35 EDELLSLLQSLADMDIPYKALQETDIGRHVNGLRKHPSGEVRLL 78
>gi|125555320|gb|EAZ00926.1| hypothetical protein OsI_22956 [Oryza sativa Indica Group]
Length = 276
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 53/193 (27%)
Query: 136 SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEW 195
S +A+++LL++L + +TF+ L+ + IG+ ++ LRKHSS VR L L + WK +VDE
Sbjct: 103 SSEAVVELLRALQAVPMTFETLEASKIGKAISGLRKHSSEQVRDLAAALYKSWKALVDEH 162
Query: 196 VKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSK 255
+ P +A G + +H ++K N+
Sbjct: 163 LTRKPPAPPTKTASALGAA---------DH-----------------ANKTNTA------ 190
Query: 256 QAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKRE 315
PRK A + R + A AP D +++L +ARK+ +E Y+ E
Sbjct: 191 ---APRKAACNKR--KEAPALAPE---------------MD-EAKLEAARKKFRERYRDE 229
Query: 316 ENAKRQRTIQVMD 328
E AK+QR IQV+D
Sbjct: 230 ETAKKQRKIQVID 242
>gi|125555096|gb|EAZ00702.1| hypothetical protein OsI_22728 [Oryza sativa Indica Group]
Length = 148
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 85/190 (44%), Gaps = 52/190 (27%)
Query: 15 VDVWTF--------IDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNGVV 66
+D W F I AI VA+ ++ L+ RRD I +RLY A R R D N +
Sbjct: 1 MDYWLFFFRGAGDNIFDAIAVAASEHPAALRSRRDAIAQRLYT---AYR-RRSDRANVIA 56
Query: 67 DVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKRILEI 126
D D + D P E +RI +
Sbjct: 57 D-----------------------------DGGVPCHED-----PVAA----ETERIKAV 78
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
L D ++SE L++LL+SL +++T L T+IG+ V+ RKH+SN +R LV+ L+
Sbjct: 79 L--LNDQEKSEATLLELLRSLQQLELTVDTLMVTEIGKAVSSYRKHNSNQIRHLVQLLIE 136
Query: 187 KWKDIVDEWV 196
WK I+DEW+
Sbjct: 137 GWKRILDEWM 146
>gi|357116248|ref|XP_003559894.1| PREDICTED: uncharacterized protein LOC100842292 [Brachypodium
distachyon]
Length = 448
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 4 DDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGN 63
D + + + AG ++ I+ AI VA+ D L+ RRD I E LY +A
Sbjct: 8 DCWAAFFRAAGDGIFDLIEAAIDVAAADRPDALRARRDAIAEHLYTATLA-----VSGAP 62
Query: 64 GVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKRI 123
+ + + S P + D I +D P G DD
Sbjct: 63 AAAAGAAARPPAPKQQQLLLPEGAASVPSLCSSDRAEAITDDGA---PRRGEGDDAVAAE 119
Query: 124 LE-IKEHLEDP-DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
E IK L + ++SE AL++LL+ L ++ T LK T+IG+ V LRKH+S +R+LV
Sbjct: 120 AERIKAALVNYHEKSEGALLELLRRLQQLEFTVHTLKVTEIGKTVTNLRKHNSKQIRQLV 179
Query: 182 KHLVRKWKDIVDEWV 196
+ LV WK IVD+W+
Sbjct: 180 RLLVGGWKLIVDDWM 194
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 254 SKQAPLPRKEALSSRPPQSASPAA--PHSVQRPREQKESRESTFDA-------------- 297
S P P + + S+P Q ASPA P SV ++ ++ A
Sbjct: 325 SNAKPGPVRPQVRSKPHQDASPAQGRPQSVPSDKQVGNYDANSVRAKLGLAKNAKLEMSN 384
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKNKGGSSQGRHW 353
+S+L A+++LQE Y+ +NAK+Q+ IQ++D ++ K N+ G G+ W
Sbjct: 385 NSKLEVAKRKLQEGYQEFDNAKKQKCIQMVDPQDVRK------QGNRSGQPSGKPW 434
>gi|293333575|ref|NP_001170689.1| uncharacterized protein LOC100384760 [Zea mays]
gi|238006942|gb|ACR34506.1| unknown [Zea mays]
gi|414887863|tpg|DAA63877.1| TPA: hypothetical protein ZEAMMB73_493349 [Zea mays]
Length = 343
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 26/196 (13%)
Query: 4 DDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGN 63
D + + AG +V+ ID AI VA+ D+ L+ERRD I ERL+ +
Sbjct: 7 DYWLGFFRGAGDNVFDAIDAAITVAASDHPAALRERRDGIAERLFTALL----------- 55
Query: 64 GVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGD---DDIDIENDNDIIDPYGGLFDDEQ 120
V A + PS S + DD D+ + L + E+
Sbjct: 56 --VTGAAGAGAAAGQGGSAGRTPVPSLCSSDRAEAVTDDGAPRGDDPV------LAETER 107
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
+ + + H D+SE L++LL+ L ++D+ F L T IG+ V+ RKHSS +R L
Sbjct: 108 IKAVLLGGH----DKSESELLELLRRLQELDLAFDTLDVTAIGKAVSNFRKHSSKQIRTL 163
Query: 181 VKHLVRKWKDIVDEWV 196
V+ L+ WK VD W+
Sbjct: 164 VRSLIEGWKRTVDMWI 179
>gi|110288880|gb|ABG66008.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
Japonica Group]
Length = 417
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 53/194 (27%)
Query: 136 SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEW 195
S +A+++LL++L + +TF+ L+ + IG+ ++ LRKHSS VR L L + WK +VDE
Sbjct: 103 SSEAVVELLRALQAVPMTFETLEASKIGKAISGLRKHSSEQVRDLAAALYKSWKALVDEH 162
Query: 196 VKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSK 255
+ P +A G + ++K N+ RK+
Sbjct: 163 LTRKPPAPPTKTASALG--------------------------AADHANKANTAAPRKA- 195
Query: 256 QAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKRE 315
A RKEA + P +++L +ARK+L+E Y+ E
Sbjct: 196 -ACNKRKEAPALAPEMD-------------------------EAKLEAARKKLRERYRDE 229
Query: 316 ENAKRQRTIQVMDI 329
E AK+QR IQV +
Sbjct: 230 ETAKKQRKIQVYYV 243
>gi|242051058|ref|XP_002463273.1| hypothetical protein SORBIDRAFT_02g040970 [Sorghum bicolor]
gi|241926650|gb|EER99794.1| hypothetical protein SORBIDRAFT_02g040970 [Sorghum bicolor]
Length = 454
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 4 DDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGN 63
D + + AG +++ ID AI VA+ D+ L+ERRD I ERL+ + +
Sbjct: 7 DYWLGFFRGAGDNIFDAIDAAITVAASDHPAALRERRDGIAERLFTALLVTGAAAAGAAG 66
Query: 64 GVVDVNKEISR--------GQHDEVKAAQQASPSTPHSVNGDDDIDIENDND--IIDPYG 113
G + + + S P + D I +D DP
Sbjct: 67 AAAAAGAGQGGAAGGTPVAGAPTPAQLHPEGAASVPSLCSSDRAEAITDDGAPRCDDPVL 126
Query: 114 GLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
E +RI + L D ++SE L++LL+ L ++D+ F L T IG+ V RKHS
Sbjct: 127 A----ETERIKAV--LLNDQEKSESELLELLRRLQELDLAFDTLDVTAIGKAVANFRKHS 180
Query: 174 SNDVRKLVKHLVRKWKDIVDEWV 196
S +R LV+ L+ WK VD W+
Sbjct: 181 SKQIRNLVRSLIEDWKHTVDVWI 203
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 29/40 (72%)
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
+++L + +++LQE Y+ +NAK+QR IQ++D +PK N
Sbjct: 389 NAKLEATKRKLQEGYQEFDNAKKQRNIQMVDPQNLPKQGN 428
>gi|357509285|ref|XP_003624931.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499946|gb|AES81149.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
Length = 302
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
QS+ L + L+ L M + LK T+IG+ VN LRKH S D+R+L + L+ WK++V+
Sbjct: 4 QSDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQLARTLIDGWKELVNA 63
Query: 195 WVKLNQPGELASS 207
WVK +A+S
Sbjct: 64 WVKATTTTPVAAS 76
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 269 PPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
PP+ + P +RP ++ + D ++L + ++RLQE+Y++ ENAKRQRTIQVM+
Sbjct: 216 PPKIENSTVP---KRPLNAQQDKSKCSDDLAKLEATKRRLQESYQQAENAKRQRTIQVME 272
Query: 329 IHEIPK 334
I+++PK
Sbjct: 273 INDLPK 278
>gi|414591026|tpg|DAA41597.1| TPA: hypothetical protein ZEAMMB73_569231, partial [Zea mays]
Length = 392
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 86/198 (43%), Gaps = 9/198 (4%)
Query: 4 DDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLY-ATCIASRCRNCDFG 62
D + + AG +++ I+ AI VA+ D+ L+ERRD I ERL+ A + S
Sbjct: 7 DYWLGFFRGAGDNIFDAIEAAITVAASDHPAALRERRDGIAERLFTALLVTSAAAAAAGA 66
Query: 63 NGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDD---- 118
Q P SV D I D DD
Sbjct: 67 AAAAPGGGAAGGTPVAGAPTPAQLHPEGAASVPSLCSSD--RAEAIADDAAPRCDDPVLA 124
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
E +RI + L D ++ E L++LL+ L ++D+ F L T IG+ V RKHSS +R
Sbjct: 125 ETERIKAVL--LSDQEKPEAELLELLRRLQELDLAFDTLDATAIGKAVANFRKHSSKQIR 182
Query: 179 KLVKHLVRKWKDIVDEWV 196
LV+ L+ WK VD W+
Sbjct: 183 NLVRSLIEDWKHTVDVWI 200
>gi|222618215|gb|EEE54347.1| hypothetical protein OsJ_01329 [Oryza sativa Japonica Group]
Length = 459
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 18/194 (9%)
Query: 14 GVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNG-VVDVNKEI 72
G D++ I AIL+A D EL RR I+E L+A + G VVD
Sbjct: 19 GADIYDVIRNAILIAGADSPRELLRRRQGIIEWLFAVAPVTVPVPAPLACGRVVD----- 73
Query: 73 SRGQHDEVKAAQQASPSTPHSVNGDDDI-DIENDNDIIDP------YGGLFDDEQ--KRI 123
G + + A H + D + E +ID Y + +D Q +
Sbjct: 74 --GAGNRLPPAAIPDGGGHHHDDNDGNFAAAEAQTSLIDQQILEALYDEIEEDTQVINEV 131
Query: 124 LEIKEHLED-PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
L IK+ L + +QS D L D L+ L M ++ LK T I V L KH S + K+ +
Sbjct: 132 LRIKDILINYKEQSVDTLFDGLRRLQLMRLSISVLKSTQIAEAVAPLNKHRSPVICKIAR 191
Query: 183 HLVRKWKDIVDEWV 196
L + WK + +WV
Sbjct: 192 DLAKGWKGVAADWV 205
>gi|53793292|dbj|BAD54514.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 345
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 28/199 (14%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV-DEW 195
++ +++ L +L + K L TD+ + V LR H S VR L +VR W+ V DE
Sbjct: 136 DEMMVEALLTLELVPAMPKMLASTDLAQDVGALRNHPSERVRGLATGIVRAWRASVKDEL 195
Query: 196 VKLNQPGELASSAMM--DGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERK 253
+K E S A+ + D KI Q P+P ++ N+S+P
Sbjct: 196 LKAAAAMEKLSQALEPDEADDHHAKILQ------------PSPPKKTA----NSSQPSFP 239
Query: 254 SKQ-APLPRKEALSS---RPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQ 309
KQ AP+ ++ PP+ PAA S +R ES S + + +A+++L+
Sbjct: 240 KKQSAPVAGGSHVTMAKMEPPREKLPAAVGSFRR-----ESAASCGTDEKAMNAAKRKLR 294
Query: 310 ENYKREENAKRQRTIQVMD 328
E Y+ E+AKRQRTI+V++
Sbjct: 295 EGYQEAEDAKRQRTIKVIE 313
>gi|357117471|ref|XP_003560491.1| PREDICTED: uncharacterized protein LOC100840373 [Brachypodium
distachyon]
Length = 274
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 157 LKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV-DEWVKLNQPGELASSAMMDGDS- 214
L TD+ + V L KH S VR L ++ +W+ V DE V + +AM + D
Sbjct: 85 LATTDLAKAVGALLKHDSERVRVLASGIMSRWRASVQDELVTVQ-------AAMENLDQI 137
Query: 215 --PQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQS 272
P K G VP +S + ++ K K+APLP+K
Sbjct: 138 PLPSNKKTVAGQQHVP-----ATKKPAASKILETTAKKMMKIKEAPLPKK---------- 182
Query: 273 ASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEI 332
SPA SV R R AD+ + + +++ QE Y+ ENAKRQR IQV++ E+
Sbjct: 183 VSPAPAVSVVR-----GDRAGLCSADTIMEATKRKFQEGYQEAENAKRQRRIQVVEAPEM 237
Query: 333 PK 334
K
Sbjct: 238 LK 239
>gi|413955650|gb|AFW88299.1| hypothetical protein ZEAMMB73_008462 [Zea mays]
Length = 184
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
LD +R A ++ ID AI VA+ D+ L+ RRD I ERLY +A
Sbjct: 11 LDYWRCFFSGARASIFDAIDAAIRVAAADHPDALRARRDAIAERLYTAIVA--------- 61
Query: 63 NGVVDVNKEISRGQHDEVKAAQ---QASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDE 119
+ +E + GQ + A + + S P S+ D ++ N++ P DD
Sbjct: 62 ---LPATQE-APGQSTPGQPALLLPEGAASVP-SLCSSDRAEVVNNDGGGAPLTNSDDDV 116
Query: 120 QKRILEIKEHLEDP-DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
IK L + D+SE L++LL L ++ T A++ T IG V LRKH S +R
Sbjct: 117 VAEAFRIKAALSNAQDKSEAELLELLGRLGQLEFTVDAIRATGIGMDVRPLRKHGSKQIR 176
Query: 179 KLVKHLV 185
+LV+ L+
Sbjct: 177 QLVRSLI 183
>gi|125556571|gb|EAZ02177.1| hypothetical protein OsI_24269 [Oryza sativa Indica Group]
gi|125598321|gb|EAZ38101.1| hypothetical protein OsJ_22452 [Oryza sativa Japonica Group]
Length = 274
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 28/198 (14%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV-DEWV 196
+ +++ L +L + K L TD+ + V LR H S VR L +VR W+ V DE +
Sbjct: 66 EMMVEALLTLELVPAMPKMLASTDLAQDVGALRNHPSERVRGLATGIVRAWRASVKDELL 125
Query: 197 KLNQPGELASSAMM--DGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKS 254
K E S A+ + D KI Q P+P ++ N+S+P
Sbjct: 126 KAAAAMEKLSQALEPDEADDHHAKILQ------------PSPPKKTA----NSSQPSFPK 169
Query: 255 KQ-APLPRKEALSS---RPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQE 310
KQ AP+ ++ PP+ PAA S +R ES S + + +A+++L+E
Sbjct: 170 KQSAPVAGGSHVTMAKMEPPREKLPAAVGSFRR-----ESAASCGTDEKAMNAAKRKLRE 224
Query: 311 NYKREENAKRQRTIQVMD 328
Y+ E+AKRQRTI+V++
Sbjct: 225 GYQEAEDAKRQRTIKVIE 242
>gi|414591025|tpg|DAA41596.1| TPA: hypothetical protein ZEAMMB73_569231 [Zea mays]
Length = 258
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 4 DDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLY-ATCIASRCRNCDFG 62
D + + AG +++ I+ AI VA+ D+ L+ERRD I ERL+ A + S
Sbjct: 7 DYWLGFFRGAGDNIFDAIEAAITVAASDHPAALRERRDGIAERLFTALLVTSAAAAAAGA 66
Query: 63 NGVVDVNKEISRGQHDEVKAAQQASP----STPHSVNGDDDIDIENDND--IIDPYGGLF 116
Q P S P + D I +D DP
Sbjct: 67 AAAAPGGGAAGGTPVAGAPTPAQLHPEGAASVPSLCSSDRAEAIADDAAPRCDDPVLA-- 124
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
E +RI + L D ++ E L++LL+ L ++D+ F L T IG+ V RKHSS
Sbjct: 125 --ETERIKAVL--LSDQEKPEAELLELLRRLQELDLAFDTLDATAIGKAVANFRKHSSKQ 180
Query: 177 VRKLVKHLVRKWKDIVDEWV 196
+R LV+ L+ WK VD W+
Sbjct: 181 IRNLVRSLIEDWKHTVDVWI 200
>gi|56785021|dbj|BAD82603.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 390
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 14 GVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNG-VVDVNKEI 72
G D++ I AIL+A D EL RR I+E L+A + G VVD
Sbjct: 19 GADIYDVIRNAILIAGADSPRELLRRRQGIIEWLFAVAPVTVPVPAPLACGRVVD----- 73
Query: 73 SRGQHDEVKAAQQASPSTPHSVNGDDDI-DIENDNDIIDP--YGGLFDDEQK------RI 123
G + + A H + D + E +ID L+D+ ++ +
Sbjct: 74 --GAGNRLPPAAIPDGGGHHHDDNDGNFAAAEAQTSLIDQQILEALYDEIEEDTQVINEV 131
Query: 124 LEIKEHLED-PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
L IK+ L + +QS D L D L+ L M ++ LK T I V L KH S + K+ +
Sbjct: 132 LRIKDILINYKEQSVDTLFDGLRRLQLMRLSISVLKSTQIAEAVAPLNKHRSPVICKIAR 191
Query: 183 HLVRKWKDIVDEWV 196
L + WK + +WV
Sbjct: 192 DLAKGWKGVAADWV 205
>gi|125531305|gb|EAY77870.1| hypothetical protein OsI_32914 [Oryza sativa Indica Group]
Length = 295
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 134 DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
D SEDA++DLL+ L + +TF+ L+ + I + ++ LRKHSS++ VR+L L + WK IV
Sbjct: 103 DSSEDAVVDLLRDLQAVPMTFETLEASKISKTISGLRKHSSSEKVRRLAAALYKSWKAIV 162
Query: 193 DE 194
DE
Sbjct: 163 DE 164
>gi|14589372|gb|AAK70627.1|AC091238_5 Putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|31430560|gb|AAP52454.1| expressed protein [Oryza sativa Japonica Group]
Length = 295
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 134 DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
D SEDA++DLL+ L + +TF+ L+ + I + ++ LRKHSS++ VR+L L + WK IV
Sbjct: 103 DSSEDAVVDLLRDLQAVPMTFETLEASKISKTISGLRKHSSSEKVRRLAAALYKSWKAIV 162
Query: 193 DE 194
DE
Sbjct: 163 DE 164
>gi|115473677|ref|NP_001060437.1| Os07g0642600 [Oryza sativa Japonica Group]
gi|113611973|dbj|BAF22351.1| Os07g0642600 [Oryza sativa Japonica Group]
Length = 450
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
+D + + AG ++ ID AI VA+ D+ L+ RRD I ERLY +
Sbjct: 6 MDYWLGFFRGAGDSIFDAIDAAIAVAASDHPAALRSRRDAIAERLYTAHLVPGAPPAGPP 65
Query: 63 NGVVDVNKEISRGQ---HDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDE 119
G + Q H E A+ + S+ + DD + +D DP E
Sbjct: 66 AGGGAAAADAPTAQLLLHPEGAASVPSLCSSDRAEVITDDGAVPRRDD--DPVAA----E 119
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+RI I L D ++SE L++LL+ L +++T L T+IG+ V+ RKH+S +R
Sbjct: 120 TERIKAIL--LNDQEKSEATLLELLRRLQQLELTVDTLTVTEIGKAVSSYRKHNSKQIRH 177
Query: 180 LVKHLVRKWKDIVDEWV 196
LV+ L+ WK IVDEW+
Sbjct: 178 LVRLLIEGWKRIVDEWM 194
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 299 SRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
++L +++LQE Y+ +NAK+QRTIQ++D +PK N
Sbjct: 389 AKLEVTKRKLQEGYQEFDNAKKQRTIQMVDPQNLPKQAN 427
>gi|23237912|dbj|BAC16486.1| unknown protein [Oryza sativa Japonica Group]
gi|50509934|dbj|BAD30255.1| unknown protein [Oryza sativa Japonica Group]
Length = 435
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
+D + + AG ++ ID AI VA+ D+ L+ RRD I ERLY +
Sbjct: 6 MDYWLGFFRGAGDSIFDAIDAAIAVAASDHPAALRSRRDAIAERLYTAHLVPGAPPAGPP 65
Query: 63 NGVVDVNKEISRGQ---HDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDE 119
G + Q H E A+ + S+ + DD + +D DP E
Sbjct: 66 AGGGAAAADAPTAQLLLHPEGAASVPSLCSSDRAEVITDDGAVPRRDD--DPVAA----E 119
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+RI I L D ++SE L++LL+ L +++T L T+IG+ V+ RKH+S +R
Sbjct: 120 TERIKAIL--LNDQEKSEATLLELLRRLQQLELTVDTLTVTEIGKAVSSYRKHNSKQIRH 177
Query: 180 LVKHLVRKWKDIVDEWV 196
LV+ L+ WK IVDEW+
Sbjct: 178 LVRLLIEGWKRIVDEWM 194
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 299 SRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
++L +++LQE Y+ +NAK+QRTIQ++D +PK N
Sbjct: 374 AKLEVTKRKLQEGYQEFDNAKKQRTIQMVDPQNLPKQAN 412
>gi|242078247|ref|XP_002443892.1| hypothetical protein SORBIDRAFT_07g003910 [Sorghum bicolor]
gi|241940242|gb|EES13387.1| hypothetical protein SORBIDRAFT_07g003910 [Sorghum bicolor]
Length = 313
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 61/264 (23%)
Query: 106 NDIIDPYGG----LFDDEQKRILEIKEHLEDPDQSE-------DALIDLLQSLADMDITF 154
+D I+ GG F D + RIL++ D +E +A+ + L++L +
Sbjct: 24 DDAIEEAGGHPRAAFRDVRVRILQLLRGATDDGVAEQLCGALDEAMAEALETLRVAPVPH 83
Query: 155 KALKETDIGRHVNQLR-KHSSNDVRKLVKHLVRKWK--------DIVDEWVKLNQ----P 201
+AL TD+ R V L KH S +R+L +VR WK + +E KL+ P
Sbjct: 84 RALASTDLARTVGALLDKHGSARIRRLAGDVVRGWKAANVTATTAVKEELDKLSADDQIP 143
Query: 202 GELASSAMMDGDS-------------PQQKIPQNGNH----QVPDFAYSPNPHNGSSGSD 244
G+ S+ + DG++ + +P H Q+P P
Sbjct: 144 GQSISAVIADGNARFRGRKEKLQIPPAKTMLPAGDVHKKKLQIPPAKMLPI--------- 194
Query: 245 KNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASA 304
+E +K P +K L P +A+ + P++ E++++ D ++ +
Sbjct: 195 VPVAEAHKKMVYVPPAKKTML----PIAATVSTPNT-------SETKKAAVDESKKMEAT 243
Query: 305 RKRLQENYKREENAKRQRTIQVMD 328
+++L+E Y+ E KRQ TIQ +D
Sbjct: 244 KRKLREGYQEAEKIKRQHTIQKID 267
>gi|218200112|gb|EEC82539.1| hypothetical protein OsI_27066 [Oryza sativa Indica Group]
Length = 451
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
+D + + AG ++ ID AI VA+ D+ L+ RRD I ERLY +
Sbjct: 6 MDYWLGFFRGAGDSIFDAIDAAIAVAASDHPAALRSRRDAIAERLYTAHLVPGAPPAVPP 65
Query: 63 NGVVDVNKEISRGQ---HDEVKAAQQASPSTPHS-VNGDDDIDIENDNDIIDPYGGLFDD 118
G + Q H E A+ + S+ + V DDD + +D DP
Sbjct: 66 AGGGGAAADAPPAQLLLHPEGAASVPSLCSSDRAEVITDDDGAVPRRDD--DPVAA---- 119
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
E + I I L D ++SE L++LL+ L +++T L T+IG+ V+ RKH+S +R
Sbjct: 120 ETECIKAIL--LNDQEKSEATLLELLRRLQQLELTVDTLTVTEIGKAVSSYRKHNSKQIR 177
Query: 179 KLVKHLVRKWKDIVDEWV 196
LV+ L+ WK IVDEW+
Sbjct: 178 HLVRLLIEGWKRIVDEWM 195
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 236 PHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPH---SVQRPREQKESRE 292
P N SG + P+ ++KQ S+P S PA+ H SV+ E ++ +
Sbjct: 328 PSNPESGPGR----PQPRTKQYQDASPARGRSQPMPSDKPASHHDENSVRAKLELAKNAK 383
Query: 293 STFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
++L +++LQE Y+ +NAK+QRTIQ++D +PK N
Sbjct: 384 LELTNSAKLEVTKRKLQEGYQEFDNAKKQRTIQMVDPQNLPKQAN 428
>gi|125574196|gb|EAZ15480.1| hypothetical protein OsJ_30893 [Oryza sativa Japonica Group]
Length = 295
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVDE 194
EDA++DLL+ L + +TF+ L+ + I + ++ LRKHSS++ VR+L L + WK IVDE
Sbjct: 106 EDAVVDLLRDLQAVPMTFETLEASKISKTISGLRKHSSSEKVRRLAAALYKSWKAIVDE 164
>gi|414877094|tpg|DAA54225.1| TPA: hypothetical protein ZEAMMB73_919257 [Zea mays]
Length = 232
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 31/202 (15%)
Query: 16 DVWTFIDTAILVASLDYATELKERRDKIVERLYATCIA----SRCRNCDFGNGVVDVNKE 71
D++ I AILVA+ D E + RRD IVE++Y R G ++V+ +
Sbjct: 31 DIYDVISKAILVAATDSPQEFRRRRDGIVEQIYTAPTVPVPQGRAAGERSGRAALEVSDK 90
Query: 72 ISR-------GQHDEVKAAQQASPSTPH--SVNG-----DDDIDIENDNDIIDPYGGLFD 117
S+ DE +++ + H NG D D + D + D
Sbjct: 91 GSKVASCTVVAPADEGNNSKKKGTAAAHHQHANGNGDSADTDAFGASGMDWLQSLAEEMD 150
Query: 118 DEQKRI---LEIKEHLED----------PDQSEDALIDLLQSLADMDITFKALKETDIGR 164
E ++I L IKE L + QS D L D L+ L M +T +K T+IG
Sbjct: 151 AETQQIDEVLRIKEILLNHHELAWFFVIVAQSSDTLFDSLRRLQLMQLTADKIKSTEIGG 210
Query: 165 HVNQLRKHSSNDVRKLVKHLVR 186
+ +RKH S+ +R LV +V+
Sbjct: 211 AIAAMRKHKSHKIRMLVHKIVK 232
>gi|326508028|dbj|BAJ86757.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 326
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
QSE AL+DLL+ L ++ T LK T IG+ V LRKH+S +R LV+ L+ WK IVDE
Sbjct: 8 QSETALLDLLRRLQQLEFTVHTLKVTAIGKTVTSLRKHNSKQIRHLVRLLIGGWKSIVDE 67
Query: 195 WV 196
W+
Sbjct: 68 WM 69
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
+S+L +++LQE Y+ +NAK+QRT+Q++D +I K N
Sbjct: 261 NSKLEMTKRKLQEGYQEFDNAKKQRTVQMVDPQDIRKQGN 300
>gi|14589373|gb|AAK70628.1|AC091238_6 Putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|31430561|gb|AAP52455.1| hypothetical protein LOC_Os10g10270 [Oryza sativa Japonica Group]
Length = 261
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 134 DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQL-RKHSSNDVRKLVKHLVRKWKDIV 192
D SE+ +++LL++L +TF+ L+ + IG+ ++ L RKHSS VR L L + WK IV
Sbjct: 78 DSSEETVVELLRALRSTPMTFETLEASRIGKTISGLRRKHSSEKVRGLAAALYKNWKAIV 137
Query: 193 DE 194
DE
Sbjct: 138 DE 139
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMD 328
D++LA+AR++LQ+ YK +AK+QR IQV+D
Sbjct: 197 DAKLAAARRKLQDGYKEAASAKKQRVIQVID 227
>gi|260799411|ref|XP_002594690.1| hypothetical protein BRAFLDRAFT_101450 [Branchiostoma floridae]
gi|229279926|gb|EEN50701.1| hypothetical protein BRAFLDRAFT_101450 [Branchiostoma floridae]
Length = 712
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 115 LFDDEQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
+ D E+ R++ I L + D I +L+SL D DI+ + LK+T IGR VN +R++
Sbjct: 1 MADSEETRLISISTQLNAMVSEGKTDDTIAILRSLRDEDISVRLLKKTQIGRAVNNVRRN 60
Query: 173 SSN-DVRKLVKHLVRKWKDIVDEWVK--LNQPGELASSAM 209
SSN +V L K +V KW+ + + + GEL S M
Sbjct: 61 SSNEEVISLAKKIVNKWRRSAESQYSSVVAETGELPCSQM 100
>gi|226506876|ref|NP_001145439.1| uncharacterized protein LOC100278816 [Zea mays]
gi|195656251|gb|ACG47593.1| hypothetical protein [Zea mays]
Length = 111
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 295 FDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
D + +L +A++RLQE Y+ ENAKRQRTIQVM++ +IPKPK+
Sbjct: 48 LDNNRKLEAAKRRLQERYQEAENAKRQRTIQVMELGDIPKPKH 90
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD--E 194
D +DLL+ L D ++T K L++T IG VN +RKH ++ DV L K L++ WK +++ +
Sbjct: 24 DGALDLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCTDEDVVNLAKILIKNWKRLLESAQ 83
Query: 195 WVKLNQPGEL--ASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPH-NGSSGSDKNNSEPE 251
K +P E+ S SP + P+ + + + P P N +++ + +
Sbjct: 84 NPKSERPNEVKNGSHPSKPSGSPSRTSPEKDSRKDAPVDFFPPPSINSHPPLRRSSVDVK 143
Query: 252 RK---SKQAPLPRKEALSSR 268
RK + PLPRK +L R
Sbjct: 144 RKDSTDSKKPLPRKPSLDGR 163
>gi|50310967|ref|XP_455506.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644642|emb|CAG98214.1| KLLA0F09361p [Kluyveromyces lactis]
Length = 292
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSL-ADM-DITFKALKETDIGRHVNQLRKHSSND 176
E K +LE + LE + D + +LQSL D+ D+ K L+ET +G VNQ +K S+ D
Sbjct: 2 ETKDVLEAVKGLEKNKNNNDVVFKILQSLDKDLKDVNEKLLRETKVGVVVNQFKKSSNPD 61
Query: 177 VRKLVKHLVRKWKDIV 192
+ KLVK ++ WKD V
Sbjct: 62 IVKLVKKMILSWKDAV 77
>gi|53792838|dbj|BAD53871.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125598342|gb|EAZ38122.1| hypothetical protein OsJ_22471 [Oryza sativa Japonica Group]
Length = 288
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 39/204 (19%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV-DEWVKL 198
+++ L +L + K L TD+ + V LR H S VR L +VR W+ V DE +K
Sbjct: 68 MVEALLTLELVPAMPKMLASTDLAQDVGALRNHPSERVRSLAIGIVRGWRASVKDELLKA 127
Query: 199 NQPGELASSAMM--DGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQ 256
E S AM + D KI Q P+P ++ + ++ Q
Sbjct: 128 AAAMEKLSQAMEPDEADDHHAKILQ------------PSPPKKTANTSRS---------Q 166
Query: 257 APLPRKEALSSRPPQSASPAAPHS-------------VQRPREQKESRESTFDADSRLAS 303
P P+K+ S+RP S + R +ES + + +
Sbjct: 167 PPFPKKQ--SARPVVGGSRVTTMAKIDPPPEKAPAAAAARSSHHRESVVPCCTDEKAMNA 224
Query: 304 ARKRLQENYKREENAKRQRTIQVM 327
A+++L+E Y+ E AKR+RTIQV+
Sbjct: 225 AKRKLREGYQEAEEAKRRRTIQVI 248
>gi|357117473|ref|XP_003560492.1| PREDICTED: uncharacterized protein LOC100840684 [Brachypodium
distachyon]
Length = 268
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 43/235 (18%)
Query: 103 ENDNDIIDPYGGLFDD--EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKET 160
E DI++ DD E +R+ I +D + + L++L + L +T
Sbjct: 38 EARGDIVELLCNAMDDDREAERLCLI---------LDDVMAESLETLRLVPAMPTVLAKT 88
Query: 161 DIGRHVNQLRKHSSNDVRKLVKHLVRKW-KDIVDEWVKLNQPGELASSAMMDGDSPQQKI 219
DI + V L+KH S VR L + +V +W D+ V+ A++ +D +I
Sbjct: 89 DIAKAVRALQKHESERVRVLARGIVSRWGATFQDDLVRFR-----AATEKLD------QI 137
Query: 220 PQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPH 279
P + + V D P S KN RK + P P+ P+ SPA
Sbjct: 138 PMS-DQIVAD--QQPVSAKILQPSAKNT----RKITEMPPPQ--------PKKVSPAPAV 182
Query: 280 SVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPK 334
V R R D+ + + +++ QE Y+ ENAKRQR IQV++ E+ K
Sbjct: 183 GVVR-----GDRAGLCSDDTIMEATKRKFQEGYQEAENAKRQRRIQVVEAPEMLK 232
>gi|301091356|ref|XP_002895865.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096533|gb|EEY54585.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 480
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 143 LLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKD 190
+L +LADM +T + LK T +GR +N+LRKH++ V K LV KWK+
Sbjct: 430 VLSTLADMVLTVEILKSTGVGRTINKLRKHTTASVAKAATQLVAKWKN 477
>gi|431894647|gb|ELK04447.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 213
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
++LLQ L M +T L+ T +G VN LRKHSS+ DV L K L++ WK ++D
Sbjct: 1 MELLQELKAMPVTLHLLQSTRVGVSVNALRKHSSDEDVIALAKSLIKSWKKLLD 54
>gi|357117449|ref|XP_003560480.1| PREDICTED: uncharacterized protein LOC100836405 [Brachypodium
distachyon]
Length = 268
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 34/200 (17%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKW-KDIVDEW 195
+DA+ + L++L + L +TDI + V L+KH S VR L + +V +W D+
Sbjct: 65 DDAMAESLETLRLVPAMPTVLAKTDIAKAVRALQKHESERVRVLARGIVSRWGATFQDDL 124
Query: 196 VKLNQPGELASSAMMDGDSPQQKIP-QNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKS 254
V+ A++ +D Q +P Q Q P A P S KN RK
Sbjct: 125 VRFR-----AATEKLD----QIPMPDQIVADQQPVSAKILQP------SAKNT----RKI 165
Query: 255 KQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKR 314
+ P P+ P+ SPA V R R D + + +++ QE Y+
Sbjct: 166 TEMPPPQ--------PKKVSPAPAVGVVR-----GDRAGLCSDDKIMEATKRKFQEGYQE 212
Query: 315 EENAKRQRTIQVMDIHEIPK 334
ENAKRQR IQV++ E+ K
Sbjct: 213 AENAKRQRRIQVVEAPEMLK 232
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 111 PYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLR 170
P GG DEQ R L + + +DLL+ L ++ +T + L+ T IG VN +R
Sbjct: 52 PCGGTVHDEQFRRLRLPKA---------GALDLLKELKNIPMTLELLQSTRIGMSVNAIR 102
Query: 171 KHSSN-DVRKLVKHLVRKWKDIVD 193
K S++ +V L K L++ WK ++D
Sbjct: 103 KQSTDEEVTSLAKSLIKSWKKLLD 126
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
D IDLLQ L +M ++ + L+ T IG VN +RK SS+ +V+ L K L++ WK ++D
Sbjct: 24 DGAIDLLQELKNMKMSLETLQSTRIGMSVNAVRKQSSDEEVQTLAKSLIKAWKKLLD 80
>gi|298711796|emb|CBJ32824.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 371
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 126 IKEHLEDPDQSEDA--LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKH 183
++ LE +ED + D+L SL +++T L+E+ +G V++L+KH+ +V K K
Sbjct: 10 LRRQLEKAVSAEDVERIADVLGSLGKVEVTLAVLQESKVGATVSKLKKHADEEVSKSAKA 69
Query: 184 LVRKWKDIVD 193
LV+KWK + +
Sbjct: 70 LVKKWKRVAE 79
>gi|348507256|ref|XP_003441172.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Oreochromis niloticus]
Length = 627
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 121 KRILEIKEHLEDPDQSEDA-LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
K+I+ +K L D ++E A ++ +LQ L D+DIT L ET IG+ VN LR+H +
Sbjct: 9 KKIMRLKLQLSD--KAEPATVLKILQKLKDLDITLDVLAETGIGKTVNSLRRH--EQAGE 64
Query: 180 LVKHLVRKWKDIV 192
L K LV+ WK ++
Sbjct: 65 LAKSLVKGWKKLL 77
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
E++ I+ I + ++ Q ++ + +DLL+ L ++ +T + L+ T IG VN +RK S++D
Sbjct: 5 EEEEIIRIAKKMDKMAQKKNGVGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDD 64
Query: 177 -VRKLVKHLVRKWKDIVDE 194
V L K L++ WK ++DE
Sbjct: 65 EVTSLAKSLIKSWKKLLDE 83
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVD 193
+S D +DLL+ L M IT L+ T IG VN LRK S++D V L K L++ WK ++D
Sbjct: 22 KSTDGAMDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLLD 81
>gi|449534389|ref|XP_004174145.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like, partial [Cucumis sativus]
Length = 102
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 150 MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
M ++ L+ T+IG+ VN LRKH S +R L + L+ +WK++VD WV+
Sbjct: 1 MALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQ 48
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVD 193
+D +DLL+ L M IT L+ T IG VN LRK S++D V L K L++ WK ++D
Sbjct: 88 QDGAVDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLLD 145
>gi|332021087|gb|EGI61474.1| Mediator of RNA polymerase II transcription subunit 26 [Acromyrmex
echinatior]
Length = 567
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A++D++ +L +T +AL+ T +G+H+N+LR+ +SN+ + K K LVR+W+D+V
Sbjct: 32 AVVDVISTLEKTTVTKEALEITRLGKHINELRRKTSNEALAKRAKDLVRRWRDMV 86
>gi|301105483|ref|XP_002901825.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
gi|262099163|gb|EEY57215.1| ATP-dependent helicase, putative [Phytophthora infestans T30-4]
Length = 2378
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 134 DQSEDA---LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKD 190
D+S D+ ++ LL+ L MD+ L+ T IG+ VN+LRKH V+ L L KW D
Sbjct: 1361 DKSSDSCAKIVKLLKRLGKMDVMLTDLRSTSIGKAVNKLRKHDDAQVKALSSKLKEKWTD 1420
Query: 191 IVDEWVKLNQPGELASSAMMDGDSPQ 216
++D+ L + S + + PQ
Sbjct: 1421 LMDKKDALERAPRFLSPELWEAIKPQ 1446
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVD 193
+S D +DLL+ L M IT L+ T IG VN LRK S++D V L K L++ WK ++D
Sbjct: 22 KSTDGAMDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLLD 81
>gi|390336480|ref|XP_797640.3| PREDICTED: uncharacterized protein LOC593051 [Strongylocentrotus
purpuratus]
Length = 910
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
+K+ DP ++ +LQ L + IT + L+ET +G+ VN+LRK ++ VK LV
Sbjct: 15 LKKLTADPVPESHRILRILQRLERLPITVRVLQETGVGKAVNKLRKQ-GGEITDAVKGLV 73
Query: 186 RKWKDIVDEWVKLNQ 200
+ W+D+V E ++ Q
Sbjct: 74 QSWRDLVREAMEAEQ 88
>gi|413916112|gb|AFW56044.1| hypothetical protein ZEAMMB73_677944 [Zea mays]
Length = 342
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDV-RKLVKHLVRKWKDIVDEW 195
A++DL++ L + +T++AL+ T IGR VN LRK + + + R L L R+WK + EW
Sbjct: 40 AVVDLIRELEALPMTYEALEATMIGRTVNGLRKTAPSALARLLADTLYRQWKALAHEW 97
>gi|355745302|gb|EHH49927.1| hypothetical protein EGM_00669, partial [Macaca fascicularis]
Length = 237
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ LI+ LQ L + + LK T IG VN++RKHS ++V L + +
Sbjct: 75 KTMLELPDQTKENLIEALQELKKKIPSREVLKSTKIGHTVNKMRKHSDSEVASLAREVYT 134
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 135 EWKTFIEK 142
>gi|355558029|gb|EHH14809.1| hypothetical protein EGK_00791, partial [Macaca mulatta]
Length = 237
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ LI+ LQ L + + LK T IG VN++RKHS ++V L + +
Sbjct: 75 KTMLELPDQTKENLIEALQELKKKIPSREVLKSTKIGHTVNKMRKHSDSEVASLAREVYT 134
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 135 EWKTFIEK 142
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 120 QKRILEIKEHLEDPDQSEDALI-----DLLQSLADMDITFKALKETDIGRHVNQLRKHSS 174
++ + I + LE + A++ DLL L D+ IT + L++T IG VN +RK S+
Sbjct: 4 EEEVCRIGKQLEKIVSQDSAMVPEEAVDLLTKLKDLPITLECLQKTRIGMSVNTMRKKSN 63
Query: 175 N-DVRKLVKHLVRKWKDIVDE 194
N +V+ L K L++ WK ++ E
Sbjct: 64 NSNVQTLAKSLIKLWKKLLPE 84
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 25/178 (14%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG VN +RKH SN
Sbjct: 4 EEELLRIAKKLEKMVARKKTEGAL-DLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNK 62
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFA-YSP 234
+V L K L+R WK ++D S A G+ ++++ + D + + P
Sbjct: 63 EVVALAKVLIRNWKQLLD------------SPATPKGEKGEERVKAKKKEKGLDCSDWKP 110
Query: 235 NPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRE 292
+ + S P +K + P R++++ S+ ++SP P S++R K E
Sbjct: 111 ---------ETSLSPPRKKRVEEPKDRRDSVDSKSSATSSPKRP-SMERSNSSKSKAE 158
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 118 DEQKRILEIKEHLEDPDQSE---DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS 174
D +K +L I++ L+ + E D +D L++L D+ I L T IG VN +RK S
Sbjct: 2 DCEKDVLRIQKKLDKIVKEELGQDEALDYLKALKDLPINLAVLTSTRIGMTVNAIRKKSE 61
Query: 175 ND-VRKLVKHLVRKWKDIV 192
ND V L K L++KWK ++
Sbjct: 62 NDEVNNLTKALIKKWKKLL 80
>gi|402854650|ref|XP_003891976.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
N-terminal and central domain-containing protein 2
[Papio anubis]
Length = 208
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ LI+ LQ L + + LK T IG VN++RKHS ++V L + +
Sbjct: 46 KTMLELPDQTKENLIEALQELKKKIPSREVLKSTKIGHTVNKMRKHSDSEVASLAREVYT 105
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 106 EWKTFIEK 113
>gi|242094044|ref|XP_002437512.1| hypothetical protein SORBIDRAFT_10g028410 [Sorghum bicolor]
gi|241915735|gb|EER88879.1| hypothetical protein SORBIDRAFT_10g028410 [Sorghum bicolor]
Length = 264
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 42/228 (18%)
Query: 116 FDDEQKRILEIKEHLEDPDQSE-------DALIDLLQSLADMDITFKALKETDIGRHVNQ 168
F D + RI+++ D +E DA+++ L++L + KAL TD+ R V
Sbjct: 37 FLDVRARIVQLLRGAVDDGVAEQLCAALDDAMVEALETLRVAPVPHKALASTDLARAVRA 96
Query: 169 LRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVP 228
L KH S +R L +VR W +D G A++ + H++
Sbjct: 97 LEKHGSARIRTLAGDVVRGWTTAID--------GATATA-------------EEELHKLS 135
Query: 229 DFAYSPNPHNGSSGSDKN--NSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPRE 286
D P G S + K +++ E+ + P+ S + P A S E
Sbjct: 136 DDRI---PRQGMSTAVKKPVDAQSEKMKTKKPI----VTQSEKIEDTKPIAAQS-----E 183
Query: 287 QKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPK 334
+ E+++ + ++ + +++L++ Y+ + KR TIQ +D E PK
Sbjct: 184 KMEAKKPIVNQSEKMENTKRKLRDGYEEAKKIKRLHTIQKIDDKEAPK 231
>gi|403258011|ref|XP_003921579.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Saimiri boliviensis
boliviensis]
Length = 208
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L++ LQ L + + LK T IG VN+LRKHS ++V L + +
Sbjct: 46 KTMLELPDQTKENLVEALQELKKKIPSREVLKSTKIGHTVNKLRKHSDSEVAYLAREVYT 105
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 106 EWKTFIEK 113
>gi|388490268|ref|NP_001253782.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Macaca mulatta]
gi|380809580|gb|AFE76665.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Macaca mulatta]
gi|383415793|gb|AFH31110.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Macaca mulatta]
Length = 208
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ LI+ LQ L + + LK T IG VN++RKHS ++V L + +
Sbjct: 46 KTMLELPDQTKENLIEALQELKKKIPSREVLKSTKIGHTVNKMRKHSDSEVASLAREVYT 105
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 106 EWKTFIEK 113
>gi|196010147|ref|XP_002114938.1| hypothetical protein TRIADDRAFT_58942 [Trichoplax adhaerens]
gi|190582321|gb|EDV22394.1| hypothetical protein TRIADDRAFT_58942 [Trichoplax adhaerens]
Length = 374
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
++IL+IK+ L + ++ +I L + L ++ IT++ LK T IG+ VN+L+KH + + K+
Sbjct: 10 QKILQIKDRLTSKNITKKQIIGLFRELDEIPITYQLLKTTLIGKAVNKLKKH-DDPIGKV 68
Query: 181 VKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQK---IPQN------GNHQVPDFA 231
+V KWK + E + ++A++ + S Q K P N G+H D
Sbjct: 69 ASRIVDKWKKMASESIA-TPSTQVAANVTSNSKSEQLKTSRTPANVFGKVQGSHSERD-N 126
Query: 232 YSPNPHNGSSG 242
S NP SSG
Sbjct: 127 RSSNPDRRSSG 137
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 103 ENDNDIIDPYGGLFDDEQKRILEIK---EHLEDPD------QSEDALIDLLQSLADMDIT 153
E D++ P LF ++ + HL D +S + +DLL+ L M +T
Sbjct: 273 EVTTDVLVPRSPLFTTCRRGSSPLSGRHHHLPFTDGETEAQRSAEGAMDLLRELKAMPVT 332
Query: 154 FKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 333 LHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 373
>gi|326672761|ref|XP_002664127.2| PREDICTED: transcription elongation factor B polypeptide 3-like
[Danio rerio]
Length = 587
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
K++L++K L++ + L+ +L L +DIT + L ET IG+ VN RKH ++ K+
Sbjct: 7 KKVLQLKRQLKECNDGH-TLLKILNKLEVLDITLEILAETGIGKVVNSFRKH--DEAGKV 63
Query: 181 VKHLVRKWKDIV 192
K LV +WK +V
Sbjct: 64 AKVLVNRWKALV 75
>gi|348680729|gb|EGZ20545.1| hypothetical protein PHYSODRAFT_493974 [Phytophthora sojae]
Length = 480
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 143 LLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
+L +LADM +T LK T +GR +N+LRKH++ V K LV KWK
Sbjct: 430 VLNTLADMVLTVDILKSTGVGRTINKLRKHATPAVAKAATQLVAKWK 476
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 136 SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+ D +DLL+ L ++T K L+ET IG VN +RKH ++ +V L K L++ WK ++D
Sbjct: 22 TTDGAMDLLRELKSFNMTLKLLQETRIGVSVNSIRKHCADEEVIALAKVLIKDWKRLLD 80
>gi|413916115|gb|AFW56047.1| hypothetical protein ZEAMMB73_697365 [Zea mays]
Length = 1067
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDV-RKLVKHLVRKWKDIVDEWV 196
D +++L++ L +D+T++ L+ T IG VN LRK + + R L L R+WK + +EW+
Sbjct: 29 DVVVELIRELQAVDMTYEVLEATKIGHTVNALRKSAPTALARLLADTLYRQWKVLANEWI 88
Query: 197 KL 198
+
Sbjct: 89 TI 90
>gi|432905685|ref|XP_004077466.1| PREDICTED: uncharacterized protein LOC101169481 [Oryzias latipes]
Length = 381
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
K+I+ K L + + ++ +LQ L D+D+T + L ET IG+ VN R+H ++
Sbjct: 8 KKIVRFKLQLSNATEPA-TVLKILQKLKDLDVTLEILAETGIGKTVNSFRRH--KQAGEV 64
Query: 181 VKHLVRKWKDIVDEWVKLNQPGELASS 207
K LV+ WK++V P E SS
Sbjct: 65 AKALVKGWKNLV--------PKEFTSS 83
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
E++ I+ I + ++ Q + + +DLL+ L + +T + L+ T IG VN +RK S++D
Sbjct: 5 EEEEIIRIAKKMDKMAQKKSGVGALDLLKELRAVPMTLELLQSTRIGMSVNAIRKQSTDD 64
Query: 177 -VRKLVKHLVRKWKDIVDE 194
V L K L++ WK ++DE
Sbjct: 65 EVTSLAKALIKSWKKLLDE 83
>gi|413916104|gb|AFW56036.1| hypothetical protein ZEAMMB73_101493 [Zea mays]
Length = 345
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS-SNDVRKLVKHLVRKWKDIVDEW 195
A++DL++ L + +T++AL+ T IGR VN LRK + S R L L R+WK + EW
Sbjct: 40 AVVDLIRELQAVPMTYEALEATMIGRTVNGLRKTAPSALARLLADTLYRQWKALAHEW 97
>gi|242084758|ref|XP_002442804.1| hypothetical protein SORBIDRAFT_08g003130 [Sorghum bicolor]
gi|241943497|gb|EES16642.1| hypothetical protein SORBIDRAFT_08g003130 [Sorghum bicolor]
Length = 371
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 131 EDPDQSEDALI-DLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKW 188
ED D + A++ + L+ L D+ +TF+AL+ T IGR VN LRK ++++ R+L L W
Sbjct: 22 EDDDGGDQAVVVESLRELQDVHMTFEALEATKIGRAVNTLRKSAASEQARRLAAALYTGW 81
Query: 189 KDIVDE 194
K + DE
Sbjct: 82 KALADE 87
>gi|225717168|gb|ACO14430.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 226
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
E++ I+ I + ++ Q + + +DLL+ L + +T + L+ T IG VN +RK S++D
Sbjct: 5 EEEEIIRIAKKMDKMAQKKSGVGALDLLKELRAVPMTLELLQSTRIGMSVNAIRKQSTDD 64
Query: 177 -VRKLVKHLVRKWKDIVDE 194
V L K L++ WK ++DE
Sbjct: 65 EVTSLAKALIKSWKKLLDE 83
>gi|367006041|ref|XP_003687752.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
gi|357526057|emb|CCE65318.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
Length = 303
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
K+++E+ + LE DA++ +L +L A++ T K L+ET +G VN+ +K ++ ++ K
Sbjct: 5 KQVIELVKDLEVSKNDNDAVLKILNTLDAEVVATEKLLRETKVGIEVNKFKKSTNPEISK 64
Query: 180 LVKHLVRKWKDIVDEWVKL 198
LV+ ++ WKD +++ KL
Sbjct: 65 LVRKIITNWKDSINKHKKL 83
>gi|302844660|ref|XP_002953870.1| hypothetical protein VOLCADRAFT_118487 [Volvox carteri f.
nagariensis]
gi|300260978|gb|EFJ45194.1| hypothetical protein VOLCADRAFT_118487 [Volvox carteri f.
nagariensis]
Length = 1329
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
AL+ ++ L + I ALK + IG+ V +LRKH++ VR LV +WK +VD V
Sbjct: 389 ALVKVISCLKMLPIDLIALKGSSIGQTVGKLRKHTNQAVRAAAAELVDQWKSVVDRSV 446
>gi|222626137|gb|EEE60269.1| hypothetical protein OsJ_13304 [Oryza sativa Japonica Group]
Length = 370
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 151 DITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELA--SSA 208
+ T A++ T+IG V LRKH S +R+LV+ L+ WK +V++WV N G + +
Sbjct: 49 EFTVDAIRVTEIGTAVKPLRKHGSKQIRQLVRSLIDGWKAVVNDWV--NNGGAIVDHTPQ 106
Query: 209 MMDGDSPQQK 218
MDG +Q+
Sbjct: 107 SMDGSCLEQE 116
>gi|335291450|ref|XP_003356504.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Sus scrofa]
Length = 208
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 110 DPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMDITFKALKE 159
DP G ++ + KR++ I K LE PDQ+++ L+++L+ L + + LK
Sbjct: 19 DPGGKIYKQATIESLKRVVVIEDIKRWKTMLELPDQTKENLVEVLRELKKKIPSREVLKS 78
Query: 160 TDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
T IG VN++R+HS ++V L + + +W+ ++E V
Sbjct: 79 TRIGHTVNKMRQHSDSEVACLAREVYTEWRTFIEEHV 115
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 123 ILEIKEHLEDPDQ-SEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
+ EIK+ + D ++ S +A+ D+LQ L +++ T K L+ET +G VN+LR S + + L
Sbjct: 5 VAEIKKLMADLEKASGEAVYDILQVLHKEVEPTEKLLRETKLGIAVNKLRTSSDSRISDL 64
Query: 181 VKHLVRKWKDIV 192
VK +++ WKD V
Sbjct: 65 VKKMIKSWKDTV 76
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 114 GLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
G +E RI + E + + AL DLL+ L ++ +T + L+ T IG VN +RK S
Sbjct: 3 GCGGEEIIRIAKKMERMVQKKNTAGAL-DLLKELKNLPMTLELLQSTRIGMSVNAIRKQS 61
Query: 174 S-NDVRKLVKHLVRKWKDIVD 193
S +DV L K L++ WK ++D
Sbjct: 62 SDDDVASLAKSLIKSWKKLLD 82
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S D +DLL+ L M +T L+ T IG VN LRK SS+ +V L K L++ WK ++D
Sbjct: 21 KSADGAMDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 80
>gi|169867242|ref|XP_001840202.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
gi|116498754|gb|EAU81649.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 121 KRILEIKEHLEDPDQSEDA-----LIDLLQSLA-DMDITFKALKETDIGRHVNQLRKHSS 174
K ++E+K++++ Q+ A +I +L+ L + D+T + L+E+ G V +LR H S
Sbjct: 3 KDVVELKKNVKALSQAAGAKNEGDIISILKILKNEFDVTEQILRESKAGLAVGKLRSHDS 62
Query: 175 NDVRKLVKHLVRKWKDIVDE 194
++ L K +VRKWK VD+
Sbjct: 63 KEISTLAKEIVRKWKTAVDK 82
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 120 QKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-D 176
++ I+ I + L+ +S + +DLL+ L M IT L+ T IG VN LRK S++ D
Sbjct: 4 EQEIVRIAKRLDKMVAKKSAEGAMDLLKELKSMPITLHLLQSTRIGMSVNALRKQSTDED 63
Query: 177 VRKLVKHLVRKWKDIVD 193
V L K L++ WK ++D
Sbjct: 64 VIALAKSLIKAWKKLLD 80
>gi|297664858|ref|XP_002810837.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2, partial [Pongo abelii]
Length = 174
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L++ LQ L + + LK T IG VN++RKHS ++V L + +
Sbjct: 12 KTMLELPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREIYT 71
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 72 EWKTFIEK 79
>gi|242052661|ref|XP_002455476.1| hypothetical protein SORBIDRAFT_03g011500 [Sorghum bicolor]
gi|241927451|gb|EES00596.1| hypothetical protein SORBIDRAFT_03g011500 [Sorghum bicolor]
Length = 239
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 42/219 (19%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIA-----SRCR 57
L+ +R + + G D++ I+ AILVA+ D E + RRD IV ++Y R
Sbjct: 28 LEPWRELFR--GRDIYDVIEKAILVAATDSPHEFRRRRDGIVGQIYTARTVPAVPQGRAA 85
Query: 58 NCDFGNGVVDVNKEISRGQHDEVKAAQQ--------ASPSTPHSVNGDDDIDIENDNDII 109
G + +K S+ V A++ + NGD D N +D
Sbjct: 86 GERSGRALEVSDKAGSKLASCTVAPAEEPEDNNDKKKGIAAAQHGNGDGD---NNTDDT- 141
Query: 110 DPYGGL-----------FDDEQKRI---LEIKEHLED-PDQ-------SEDALIDLLQSL 147
YG + D E + I L IKE L + P+Q S D L D L+ L
Sbjct: 142 -AYGAIGMEWLQSLSDQMDAETQEINEVLRIKEILLNHPEQFSVIVAQSVDNLFDSLRRL 200
Query: 148 ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
M +T +K T+IG + + KH S+ +R LV +++
Sbjct: 201 QLMQLTADKIKSTEIGGAIVAVSKHKSHKIRMLVHEIIK 239
>gi|222637546|gb|EEE67678.1| hypothetical protein OsJ_25317 [Oryza sativa Japonica Group]
Length = 321
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 153 TFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
T L T+IG+ V+ RKH+S +R LV+ L+ WK IVDEW+
Sbjct: 22 TVDTLTVTEIGKAVSSYRKHNSKQIRHLVRLLIEGWKRIVDEWM 65
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 299 SRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKNAFFGKN 343
++L +++LQE Y+ +NAK+QRTIQ++D +PK N + N
Sbjct: 260 AKLEVTKRKLQEGYQEFDNAKKQRTIQMVDPQNLPKQANRNWQPN 304
>gi|242094012|ref|XP_002437496.1| hypothetical protein SORBIDRAFT_10g028160 [Sorghum bicolor]
gi|241915719|gb|EER88863.1| hypothetical protein SORBIDRAFT_10g028160 [Sorghum bicolor]
Length = 324
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 35/245 (14%)
Query: 106 NDIIDPYGG----LFDDEQKRILEIKEHLEDPDQSE-------DALIDLLQSLADMDITF 154
+D I+ GG F D + RIL++ D +E +A+ + L++L +
Sbjct: 24 DDAIEEAGGHPRAAFKDVRVRILQLLRAATDDGVAEQLCGALDEAMAEALETLRVAPVPH 83
Query: 155 KALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKW--------KDIVDEWVKLNQ----PG 202
L TD+ R V L KH S +R+L +VR W + +E KL+ P
Sbjct: 84 GLLASTDLARTVGALEKHGSPRIRRLAGDVVRGWTAGNVATTTAVKEELGKLSADDRIPR 143
Query: 203 ELASSAMMDGDSP--QQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLP 260
S+ + DG++ ++K+ +P SG K + P + P+
Sbjct: 144 RSTSAVIADGNARGHKEKLHVQPAKMLP---------TAESGKKKLHIPPAKMVPAVPVA 194
Query: 261 RKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKR 320
+ P + +V P E+++ D ++ + +++L+E Y+ E KR
Sbjct: 195 EADKKKVYVPPAKMLPTTATVSIP-NTSETKKPAVDESKKMEATKRKLREGYEEAEKIKR 253
Query: 321 QRTIQ 325
Q I+
Sbjct: 254 QHIIK 258
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
E++ I+ I + ++ Q ++ +DLL+ L + +T + L+ T IG VN +RK S++D
Sbjct: 5 EEEDIIRIAKKMDKMAQKKNGAGALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDD 64
Query: 177 -VRKLVKHLVRKWKDIVDE 194
V L K L++ WK ++DE
Sbjct: 65 EVTSLAKALIKSWKKLLDE 83
>gi|426222790|ref|XP_004005565.1| PREDICTED: transcription elongation factor A protein 3 [Ovis aries]
Length = 375
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L I + LE + + +DLL+ L ++ + L+ T IG VN +RKH SN
Sbjct: 3 QEEELLRIAKKLEKRVARKKTEGALDLLKKLDSWQMSIQLLQTTRIGVAVNGVRKHCSNK 62
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFA-YSP 234
+V L K L+R WK ++D S A G+ ++++ + D + + P
Sbjct: 63 EVVALAKVLIRNWKQLLD------------SPATPKGEKREERVKAKKKEKGLDCSDWKP 110
Query: 235 NPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRE 292
+ + S P +K + P R++++ S+ ++SP P S++R K E
Sbjct: 111 ---------ETSLSPPRKKRVEEPKDRRDSVDSKSSATSSPKRP-SMERSNSSKSKAE 158
>gi|449533566|ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Cucumis sativus]
Length = 240
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 32/35 (91%)
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIPK 334
+L + +++LQE+Y++ ENAK+QRTIQVM++H++PK
Sbjct: 182 KLEATKRKLQESYQQAENAKKQRTIQVMELHDLPK 216
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 112 YGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRK 171
G +DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK
Sbjct: 11 LAGTMEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRK 69
Query: 172 HSSN-DVRKLVKHLVRKWKDIVD 193
S++ +V L K L++ WK ++D
Sbjct: 70 QSTDEEVTSLAKSLIKSWKKLLD 92
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 136 SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
S + +DLL+ L + +T K L+ET IG VN +RKH ++ +V L K L++ WK ++D
Sbjct: 22 STEGALDLLKELRSLKMTLKLLQETRIGMSVNSIRKHCTDEEVISLAKLLIKDWKRLLD 80
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S D+ +DLL+ L ++ ++ + L+ T +G VN +RK SSN +V+ L K L++ WK ++D
Sbjct: 21 KSMDSALDLLRELKNIKMSLETLQSTRVGMSVNAVRKQSSNEEVQTLAKTLIKSWKKLLD 80
>gi|296489088|tpg|DAA31201.1| TPA: hypothetical protein LOC539385 [Bos taurus]
Length = 208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 110 DPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMDITFKALKE 159
DP G ++ + KR++ I K LE PDQS++ L++ L+ L + + LK
Sbjct: 19 DPGGKIYKQATIESLKRVVVIEDIKRWKTMLELPDQSKENLVEALRELKKKIPSREVLKS 78
Query: 160 TDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPG 202
T IG VN++R+HS ++V L + + +W+ +++ V N+P
Sbjct: 79 TKIGHTVNKMRQHSDSEVACLAREVYTEWRTFIEKHV--NRPS 119
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 114 GLFDDEQKRILEIKEHLEDPDQSEDA-LIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
G + KR L L DPD A +DLL+ L ++ +T + L+ T IG VN +RK
Sbjct: 99 GALEVRWKRAL-----LSDPDVGPVAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQ 153
Query: 173 SSN-DVRKLVKHLVRKWKDIVD 193
S++ +V L K L++ WK ++D
Sbjct: 154 STDEEVTSLAKSLIKSWKKLLD 175
>gi|156841304|ref|XP_001644026.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156114659|gb|EDO16168.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 323
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDV 177
E K ++E+ + LE + ++ +LQ+L ++ T K L+ET +G VN+ +K S+ ++
Sbjct: 2 EAKEVIELVKDLEKGKNDDSHVLKILQTLDKEVVATEKLLRETKVGVEVNKFKKSSNVEI 61
Query: 178 RKLVKHLVRKWKDIVD--EWVKLNQP 201
KLV+ ++ WKD ++ + +KL Q
Sbjct: 62 SKLVRKMINSWKDAINRSKKIKLQQA 87
>gi|157279893|ref|NP_001098462.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Bos taurus]
gi|325530293|sp|A5PKE4.1|TEAN2_BOVIN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|148744002|gb|AAI42458.1| LOC539385 protein [Bos taurus]
Length = 208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 12/103 (11%)
Query: 110 DPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMDITFKALKE 159
DP G ++ + KR++ I K LE PDQS++ L++ L+ L + + LK
Sbjct: 19 DPGGKIYKQATIESLKRVVVIEDIKRWKTMLELPDQSKENLVEALRELKKKIPSREVLKS 78
Query: 160 TDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPG 202
T IG VN++R+HS ++V L + + +W+ +++ V N+P
Sbjct: 79 TKIGHTVNKMRQHSDSEVACLAREVYTEWRTFIEKHV--NRPS 119
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-NDVRKLVKHLVRKWKDIVD 193
+S +DLL+ L +M IT + L+ T +G VN LRK S+ N++ + K L++ WK ++D
Sbjct: 22 KSTGGALDLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEIITISKSLIKSWKKLLD 81
Query: 194 EWVKLNQPGE 203
QPG+
Sbjct: 82 GS---EQPGK 88
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 131 EDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWK 189
+ P ++ +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK
Sbjct: 25 KSPGCLQEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWK 84
Query: 190 DIVD 193
++D
Sbjct: 85 KLLD 88
>gi|350421418|ref|XP_003492836.1| PREDICTED: hypothetical protein LOC100744824 [Bombus impatiens]
Length = 540
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A++D++ +L IT + L+ T +G+++N+LR+ ++ND + K K LVR+W+D+V
Sbjct: 27 AVVDVITALEKTTITKEVLESTRLGKYINELRRKTNNDALAKRAKDLVRRWRDMV 81
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 123 ILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRK 179
I+ I + ++ Q ++A +DLL+ L +M +T + L+ T IG VN +RK S++ +V
Sbjct: 7 IIRIAKKMDKMVQKKNAAGALDLLKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEVTS 66
Query: 180 LVKHLVRKWKDIVD 193
L K L++ WK ++D
Sbjct: 67 LAKSLIKSWKKLLD 80
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
+ ED +DLL+ L ++ +T + L +T IG VN+LRK SS+D V L K L++ WK +
Sbjct: 4 EEEDQALDLLKELQNLPVTLEILTKTRIGMTVNELRKSSSDDEVISLSKTLIKNWKKFL 62
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-NDVRKLVKHLVRKWKDIVD 193
+S +DLL+ L +M IT + L+ T +G VN LRK S+ N++ + K L++ WK ++D
Sbjct: 22 KSTGGALDLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEIITISKSLIKSWKKLLD 81
Query: 194 EWVKLNQPGE 203
QPG+
Sbjct: 82 GS---EQPGK 88
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 129 HLEDPDQSED--ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLV 185
+L P++S+D +DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L+
Sbjct: 28 NLFSPEESQDKAGALDLLKELKNILMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLI 87
Query: 186 RKWKDIVD 193
+ WK ++D
Sbjct: 88 KSWKKLLD 95
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDA--LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
E++ I+ I + ++ Q ++ +DLL+ L + +T + L+ T IG VN +RK S++
Sbjct: 5 EEEEIIRIAKKIDKMAQKKNGSGALDLLKELRSVPMTLELLQSTRIGMSVNAIRKQSTDE 64
Query: 176 DVRKLVKHLVRKWKDIVDE 194
+V L K L++ WK ++DE
Sbjct: 65 EVTSLAKSLIKSWKKLLDE 83
>gi|328789186|ref|XP_003251240.1| PREDICTED: hypothetical protein LOC725023 isoform 3 [Apis
mellifera]
Length = 516
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A++D++ +L IT + L+ T +G+++N+LR+ +SND + K K LVR+W+D+V
Sbjct: 3 AVVDVVTALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMV 57
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|340726938|ref|XP_003401808.1| PREDICTED: hypothetical protein LOC100644741 isoform 1 [Bombus
terrestris]
Length = 540
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A++D++ +L IT + L+ T +G+++N+LR+ ++ND + K K LVR+W+D+V
Sbjct: 27 AVVDVITALEKTTITKEVLESTRLGKYINELRRKTNNDALAKRAKDLVRRWRDMV 81
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-NDVRKLVKHLVRKWKDIVDEWVKLN 199
+DLL+ L +M IT + L+ T +G VN LRK S+ N++ L K L++ WK ++D
Sbjct: 28 LDLLRELKNMPITLELLQSTHVGMSVNALRKQSNDNEIITLSKSLIKSWKKLLDGS---E 84
Query: 200 QPGE 203
QPG+
Sbjct: 85 QPGK 88
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|397487966|ref|XP_003815047.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Pan paniscus]
Length = 208
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L++ LQ L + + LK T IG VN++RKHS ++V L + +
Sbjct: 46 KTMLELPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYT 105
Query: 187 KWKDIVDE 194
+WK ++
Sbjct: 106 EWKTFTEK 113
>gi|29791737|gb|AAH50623.1| TCEA2 protein [Homo sapiens]
gi|119595575|gb|EAW75169.1| transcription elongation factor A (SII), 2, isoform CRA_b [Homo
sapiens]
Length = 242
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|340726940|ref|XP_003401809.1| PREDICTED: hypothetical protein LOC100644741 isoform 2 [Bombus
terrestris]
Length = 530
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A++D++ +L IT + L+ T +G+++N+LR+ ++ND + K K LVR+W+D+V
Sbjct: 17 AVVDVITALEKTTITKEVLESTRLGKYINELRRKTNNDALAKRAKDLVRRWRDMV 71
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|110759136|ref|XP_001120925.1| PREDICTED: hypothetical protein LOC725023 isoform 1 [Apis
mellifera]
Length = 540
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A++D++ +L IT + L+ T +G+++N+LR+ +SND + K K LVR+W+D+V
Sbjct: 27 AVVDVVTALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMV 81
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M +T L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 78 KSAEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 137
>gi|413916218|gb|AFW56150.1| hypothetical protein ZEAMMB73_157798 [Zea mays]
Length = 140
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 6 FRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
R L G DVW +D A+ A+ D +L+ RRD IV+RLYA A+RCRNCD
Sbjct: 7 LRRALAAFGGDVWDLVDAALAAAARDSPGDLRARRDGIVQRLYAG--AARCRNCD 59
>gi|328789184|ref|XP_003251239.1| PREDICTED: hypothetical protein LOC725023 isoform 2 [Apis
mellifera]
Length = 530
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A++D++ +L IT + L+ T +G+++N+LR+ +SND + K K LVR+W+D+V
Sbjct: 17 AVVDVVTALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMV 71
>gi|62183957|gb|AAX73298.1| putative BAH domain-containing protein [Solanum lycopersicum]
Length = 1608
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%)
Query: 113 GGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
G L D + RI+E+ + E+ L+ LL++L + + +AL+ +IG+ VN LR+H
Sbjct: 310 GWLQDVHRGRIVEVSNSKDGDISIEEFLLVLLRALDRLPVNLQALQMCNIGKSVNHLRQH 369
Query: 173 SSNDVRKLVKHLVRKWKDIVDEWVKL 198
+ ++++ + LV WK V+ + +
Sbjct: 370 KNMEIQRKARSLVDTWKKRVEAEMNM 395
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 21 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIGLAKSLIKSWKKLLD 80
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+ IDLL+ L +++T K L+ET IG VN +RKH ++ +V L K L++ WK ++D
Sbjct: 24 EGAIDLLKELKGVNMTLKLLQETRIGMSVNGIRKHCTDEEVIALAKVLIKDWKRLLD 80
>gi|113205156|gb|AAX95757.2| BAH domain-containing protein, putative [Solanum lycopersicum]
Length = 1631
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%)
Query: 113 GGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
G L D + RI+E+ + E+ L+ LL++L + + +AL+ +IG+ VN LR+H
Sbjct: 333 GWLQDVHRGRIVEVSNSKDGDISIEEFLLVLLRALDRLPVNLQALQMCNIGKSVNHLRQH 392
Query: 173 SSNDVRKLVKHLVRKWKDIVDEWVKL 198
+ ++++ + LV WK V+ + +
Sbjct: 393 KNMEIQRKARSLVDTWKKRVEAEMNM 418
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|114556722|ref|XP_001150996.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 isoform 3 [Pan troglodytes]
gi|426329745|ref|XP_004025895.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Gorilla gorilla gorilla]
gi|410210050|gb|JAA02244.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
gi|410265674|gb|JAA20803.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
gi|410296030|gb|JAA26615.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
gi|410352709|gb|JAA42958.1| transcription elongation factor A (SII) N-terminal and central
domain containing 2 [Pan troglodytes]
Length = 208
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L++ LQ L + + LK T IG VN++RKHS ++V L + +
Sbjct: 46 KTMLELPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYT 105
Query: 187 KWKDIVDE 194
+WK ++
Sbjct: 106 EWKTFTEK 113
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M +T L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLD 81
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EIK + + D++ D ++ LL L D + + K L+ET +G VN+ R HS++D+ LV
Sbjct: 5 EIKSTVSNLDKASDDATILKLLNILNDGVKPSEKLLRETKVGVAVNKYRSHSNSDINSLV 64
Query: 182 KHLVRKWKDIV 192
K ++R WK+ V
Sbjct: 65 KKMIRTWKESV 75
>gi|222630841|gb|EEE62973.1| hypothetical protein OsJ_17780 [Oryza sativa Japonica Group]
Length = 302
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 40/226 (17%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKW-----KDI 191
++ + + L +L + +T + L TD+ V LRKH S +R L +VR+W +D+
Sbjct: 67 DEVMAESLLTLRLVPVTPRTLATTDLAGVVGALRKHDSERIRGLATDIVRRWRAAVKRDL 126
Query: 192 VDEWV---KLNQPGELASSAMMDGDSPQQKIPQ---NGNHQVPDFAYSPNPH-------- 237
V V KL+Q E +A D P + +G H + + A NP
Sbjct: 127 VRIGVAMEKLSQTPERIEAA----DRPVSDLDAKECSGRHGLGNKAEGANPSAEEEAAGR 182
Query: 238 ------NGSSGSDK-NNSEPERKSKQAPLPRKE---ALSSRPPQSAS-----PAAPHSVQ 282
N S G +K + +RK +A RK A +++P S S AP +V
Sbjct: 183 RDGVKPNHSDGGEKLMTAATKRKLDEAQKRRKTADMAAAAKPEGSNSLPLLKMVAP-AVV 241
Query: 283 RPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
++ES E D + ++A+A+++L+E Y+ E AK++R I V++
Sbjct: 242 ASHGRRESIELHND-EEKIAAAKRKLREGYQDAEEAKKRRKIHVIE 286
>gi|307186266|gb|EFN71929.1| Mediator of RNA polymerase II transcription subunit 26 [Camponotus
floridanus]
Length = 556
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 28/227 (12%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVDEWVK 197
++D++ +L IT + L+ T +G+H+N+LR+ +SN+ + K K LVR W+D+V V
Sbjct: 27 TVVDVITALEKTTITKEVLEITRLGKHINELRRKTSNETLAKRAKDLVRHWRDMVLPSVH 86
Query: 198 LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERK---- 253
LA +A + ++ +N Q P PH+ ++ P R
Sbjct: 87 STPQPTLADTAPPALNGAKEVALRNFKPQSPALRGLLKPHSPL----LKDATPLRVLSPA 142
Query: 254 -SKQAPLPRKEALSSRPPQSASPAAPHSVQ------RPREQKESRESTFDADSRLASARK 306
S + R S+ QS +P + H + P S+ T +A R S+ K
Sbjct: 143 LSMHSDHSRSPNASTNSKQSITPTSNHRISSCSRNASPVLSSSSQNHTIEAVPRTHSSNK 202
Query: 307 RLQENYKREENAKRQRT-------IQVMDIHEIPKPKNAFFGKNKGG 346
RL ++EE+ K Q I+ M + ++P G+N G
Sbjct: 203 RL----RKEESGKEQHQCYQSPHGIEPM-VEQVPAKNQRLNGENISG 244
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M +T L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLD 81
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M +T L+ T +G VN LRK SS++ V L K L++ WK ++D
Sbjct: 30 KSAEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEGVIALAKSLIKSWKKLLD 89
>gi|23308505|ref|NP_694580.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Homo sapiens]
gi|74752040|sp|Q96MN5.1|TEAN2_HUMAN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|16552144|dbj|BAB71250.1| unnamed protein product [Homo sapiens]
gi|23271582|gb|AAH35374.1| Chromosome 1 open reading frame 83 [Homo sapiens]
gi|119627108|gb|EAX06703.1| chromosome 1 open reading frame 83 [Homo sapiens]
gi|167773393|gb|ABZ92131.1| chromosome 1 open reading frame 83 [synthetic construct]
Length = 208
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L++ LQ L + + LK T IG VN++RKHS ++V L + +
Sbjct: 46 KTMLELPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVASLAREVYT 105
Query: 187 KWKDIVDE 194
+WK ++
Sbjct: 106 EWKTFTEK 113
>gi|116786642|gb|ABK24185.1| unknown [Picea sitchensis]
Length = 109
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 33/42 (78%)
Query: 293 STFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPK 334
S+ D R+ +++++LQE Y++ E AKRQRT+QVMD+ ++PK
Sbjct: 43 SSVDVSVRVEASKRKLQERYQQVETAKRQRTVQVMDLQDLPK 84
>gi|366987517|ref|XP_003673525.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
gi|342299388|emb|CCC67142.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDI--TFKALKETDIGRHVNQLRKHSSNDVR 178
K +L + + LE E ++++L L D ++ T K L+ET +G VN+ +K ++ ++
Sbjct: 4 KEVLTLVKTLEKSKSDEQTVLEILSRL-DKEVVPTEKLLRETKVGVEVNKFKKSTNVEIA 62
Query: 179 KLVKHLVRKWKDIVDEWVKLNQ 200
KLVK ++ WKD ++ KL Q
Sbjct: 63 KLVKKMISSWKDAINRNKKLKQ 84
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 133 PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDI 191
P ++ +DLL+ L M +T L+ T +G VN LRK SS+ +V L K L++ WK +
Sbjct: 56 PPFFQEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKL 115
Query: 192 VD 193
+D
Sbjct: 116 LD 117
>gi|296208027|ref|XP_002750904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Callithrix jacchus]
Length = 208
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE P Q+++ L++ LQ L + + LK T IG VN+LRKHS ++V L + +
Sbjct: 46 KTMLELPGQTKENLVEALQELKKKIPSREVLKSTKIGHTVNKLRKHSDSEVAYLAREVYT 105
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 106 EWKTFIEK 113
>gi|449459488|ref|XP_004147478.1| PREDICTED: uncharacterized protein LOC101206878 [Cucumis sativus]
Length = 1629
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
ED L+ LL++L + + AL+ ++G+ VN LR H +++++K + LV WK V+ +
Sbjct: 383 EDFLLALLRALDKLPVNLNALQTCNVGKSVNHLRSHKNSEIQKKARSLVDTWKKRVEAEM 442
Query: 197 KLN 199
+N
Sbjct: 443 DVN 445
>gi|449517160|ref|XP_004165614.1| PREDICTED: uncharacterized LOC101206878 [Cucumis sativus]
Length = 1629
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
ED L+ LL++L + + AL+ ++G+ VN LR H +++++K + LV WK V+ +
Sbjct: 383 EDFLLALLRALDKLPVNLNALQTCNVGKSVNHLRSHKNSEIQKKARSLVDTWKKRVEAEM 442
Query: 197 KLN 199
+N
Sbjct: 443 DVN 445
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
E++ ++ I + ++ Q ++ +DLL+ L + +T + L+ T IG VN +RK S++
Sbjct: 5 EEEEVIRIAKKIDKMAQKKNGAGALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDE 64
Query: 176 DVRKLVKHLVRKWKDIVDE 194
+V L K L++ WK ++DE
Sbjct: 65 EVTSLAKSLIKSWKKLLDE 83
>gi|194207427|ref|XP_001492860.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Equus caballus]
gi|335772927|gb|AEH58220.1| hypothetical protein [Equus caballus]
Length = 208
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 102 IENDNDIIDPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMD 151
I+N DP G ++ + KR++ I K LE PDQS++ L++ L+ L
Sbjct: 11 IQNSPQKKDPGGKIYKQATIESLKRVVVIEDIKRWKTMLELPDQSKENLVEALRELKKKI 70
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
+ + LK T IG VN++R+HS ++V L + + +W+ +++
Sbjct: 71 PSREVLKSTRIGHTVNKMRRHSDSEVACLAREVYTEWRTFIEK 113
>gi|255713242|ref|XP_002552903.1| KLTH0D04136p [Lachancea thermotolerans]
gi|238934283|emb|CAR22465.1| KLTH0D04136p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDI--TFKALKETDIGRHVNQLRKHSSND 176
E K ++ + ++LE +++++I++L SL D D+ T K L+ET +G VNQ +K S+
Sbjct: 2 ESKEVITLVKNLEKSKNNDESVIEIL-SLLDKDLKPTEKLLRETKVGVVVNQFKKSSNAK 60
Query: 177 VRKLVKHLVRKWKDIV 192
+ LVK ++ +W+D +
Sbjct: 61 IAGLVKKMIGEWRDAI 76
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M +T L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 22 KSAEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 81
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 123 ILEIKEHLEDPDQSEDA--LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRK 179
I+ I + ++ Q ++A +DLL+ L +M +T + L+ T IG VN +RK S++ ++
Sbjct: 7 IIRIAKKMDKMVQKKNAGGALDLLKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEITS 66
Query: 180 LVKHLVRKWKDIVD 193
L K L++ WK ++D
Sbjct: 67 LAKSLIKSWKKLLD 80
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L M +T L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 2 VDLLRELKAMPVTLNLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 55
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 24/157 (15%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVDEWV 196
+ +DLL+ L ++ + L+ T IG VN +RKH SN +V L K L+R WK ++D
Sbjct: 1 EGALDLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEVVALAKVLIRNWKQLLD--- 57
Query: 197 KLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFA-YSPNPHNGSSGSDKNNSEPERKSK 255
S A G+ ++++ + D + + P + + S P K
Sbjct: 58 ---------SPATPKGEKGEERVKAKKKEKGLDCSDWKP---------ETSLSPPREKRV 99
Query: 256 QAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRE 292
+ P R++++ S+ ++SP P S++R K E
Sbjct: 100 EEPKDRRDSVDSKSSATSSPKRP-SMERSNSSKSKAE 135
>gi|440904860|gb|ELR55318.1| hypothetical protein M91_07816, partial [Bos grunniens mutus]
Length = 232
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 110 DPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMDITFKALKE 159
DP G ++ + KR++ I K LE PDQS++ L+ L+ L + + LK
Sbjct: 43 DPGGKIYKQATIESLKRVVVIEDIKRWKTMLELPDQSKENLVKALRELKKKIPSREVLKS 102
Query: 160 TDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPG 202
T IG VN++R+HS ++V L + + +W+ +++ V N+P
Sbjct: 103 TKIGHTVNKMRQHSDSEVACLAREVYTEWRTFIEKHV--NRPS 143
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
DDE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MDDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|301610738|ref|XP_002934911.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Xenopus (Silurana) tropicalis]
Length = 508
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
+R+ ++KE L Q + L SL ++DIT L ET IG+ VN LRKHS +V +
Sbjct: 8 QRVQQLKERLGRA-QDTRKIYKALSSLKELDITLDILVETGIGKTVNGLRKHS--EVGDV 64
Query: 181 VKHLVRKWKDIVDE 194
K +V +WK +V E
Sbjct: 65 AKSIVIQWKKLVPE 78
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 118 DEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-ND 176
DE RI + E + + AL DLL+ L + +T + L+ T IG VN +RK S D
Sbjct: 6 DEIIRIAKKMERMVQKKNTAGAL-DLLKELKSLPMTLELLQSTRIGMSVNAIRKQSGEED 64
Query: 177 VRKLVKHLVRKWKDIVD 193
V L K L++ WK ++D
Sbjct: 65 VTSLAKSLIKSWKKLLD 81
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
E++ I+ I + ++ Q ++ +DLL+ L + +T + L+ T IG VN +RK S++
Sbjct: 5 EEEDIIRIAKKIDKMAQKKNGAGALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDE 64
Query: 176 DVRKLVKHLVRKWKDIVDE 194
+V L K L++ WK ++DE
Sbjct: 65 EVTSLAKSLIKSWKKLLDE 83
>gi|224015651|ref|XP_002297475.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220967841|gb|EED86214.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1059
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
+L IKE+L + D DLL+ L D+ ++ L +T I V QLR+H + L K
Sbjct: 284 VLNIKENLMK-QPTTDETFDLLEDLDDISMSADILAKTQIAMAVAQLRRHKETTISGLAK 342
Query: 183 HLVRKWKDIVDE 194
LV+KWK V++
Sbjct: 343 TLVQKWKKAVND 354
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-N 175
+DE RI + + +D +DLL++L ++I + L +T IG VN+LRK S +
Sbjct: 4 EDEVFRIQKKMSKISSDGTGQDQALDLLKTLQTLNINLEILTKTRIGMTVNELRKSSKDD 63
Query: 176 DVRKLVKHLVRKWKDIV 192
DV L K L++ WK +
Sbjct: 64 DVIALAKTLIKNWKRFL 80
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
D +DLL+ L M +T L+ T IG VN LRK S++ +V L K L++ WK ++D
Sbjct: 1 DGAMDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLLD 57
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VR 178
QK+I +I + Q E AL DLL++L ++I + L +T IG VN+LRK S +D V
Sbjct: 11 QKKIGKISTSSDGAGQ-EQAL-DLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVI 68
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHN 238
L K L++ WK + G Q ++G + + N +
Sbjct: 69 ALAKTLIKNWKRFLASPAPPAAAG-------------NQTPKESGGTAAKESGGASNKES 115
Query: 239 GSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKE 289
G + S+ N S KS +L+++ S+ + +V+ RE+K+
Sbjct: 116 GGAASNNNKSSSAGKS--------NSLANKEKSSSGSNSSSTVKDKREEKK 158
>gi|449491840|ref|XP_002192819.2| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Taeniopygia guttata]
Length = 677
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVDEWVK 197
A+++++ SL IT +AL+ET +GR +N++RK +SN ++ K K L+R W+ ++ E V
Sbjct: 99 AVLEVISSLEKYPITKEALEETRLGRLINEVRKKTSNEELAKRAKKLLRNWQKLI-EPVT 157
Query: 198 LNQP 201
N+P
Sbjct: 158 QNEP 161
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 113 GGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
G +DE R + + + + AL DLL+ L ++ +T + L+ T IG VN +RK
Sbjct: 20 AGAMEDEVVRFAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQ 78
Query: 173 SSN-DVRKLVKHLVRKWKDIVD 193
S++ +V L K L++ WK ++D
Sbjct: 79 STDEEVTSLAKSLIKSWKKLLD 100
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS-SNDVRKLVKHLVRKWKDIVDE 194
E+AL D+L+SL ++ +T L++T IG VN LRK S S +V L K L++ WK ++++
Sbjct: 2 ENAL-DILKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLLNQ 59
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS-SNDVRKLVKHLVRKWKDIVDE 194
E+AL D+L+SL ++ +T L++T IG VN LRK S S +V L K L++ WK ++++
Sbjct: 251 ENAL-DILKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLLNQ 308
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 128 EHLEDPDQSEDALIDLLQSLADM-DITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
+ L ED ++ +L +L IT L+E+ G V +LR+H+S V L K +VR
Sbjct: 11 KSLSSASTDED-IVGILNTLKQQPKITESLLRESKAGLAVGKLRQHASKRVADLAKEIVR 69
Query: 187 KWKDIVDEWVKLNQPGELASSAMMDGDSPQQK--IPQNGNHQVPDFAYSPNPHNGSSGSD 244
KWK V+ + + G A+S +G + K + N P +P SGS
Sbjct: 70 KWKTEVEREKQASGGGAKAAS---NGKTSAAKKSVSAGSNAATPSTPVTPTASTSGSGSK 126
Query: 245 KNNS 248
N +
Sbjct: 127 LNET 130
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
K I+ + + LE +S+ +I LL L D+ T K L+ET +G VN+LR H++ +V
Sbjct: 4 KEIVTVMKDLEKA-ESDSQIIRLLTLLQTDVVPTEKVLRETKVGVTVNRLRSHANPEVGT 62
Query: 180 LVKHLVRKWKDIVDE 194
LVK +++ WKD V +
Sbjct: 63 LVKKIIKTWKDGVSQ 77
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 111 PYGGLFDDEQKRILEIKEHLEDPDQSEDA-LIDLLQSLADMDITFKALKETDIGRHVNQL 169
P+ D L + HL Q++ A +DLL+ L ++ +T + L+ T IG VN L
Sbjct: 11 PFASTLD------LSSQLHLNLFFQTQQAGALDLLKELKNIPMTLELLQSTRIGMSVNAL 64
Query: 170 RKHSSN-DVRKLVKHLVRKWKDIVD 193
RK S++ +V L K L++ WK ++D
Sbjct: 65 RKQSTDEEVTSLAKSLIKSWKKLLD 89
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
K I+ + + LE + S+ +I LL L D+ T K L+ET +G VN+LR H++ +V
Sbjct: 48 KEIVTVMKDLEKAE-SDSQIIRLLTLLQTDVVPTEKVLRETKVGVTVNRLRSHANPEVGT 106
Query: 180 LVKHLVRKWKDIVDE 194
LVK +++ WKD V +
Sbjct: 107 LVKKIIKTWKDGVSQ 121
>gi|413916108|gb|AFW56040.1| hypothetical protein ZEAMMB73_150497 [Zea mays]
Length = 327
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 25/209 (11%)
Query: 134 DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK-HLVRKWKDIV 192
++ DA+++L++ +D+T++ L+ T IG V+ LRK + + L+ L R+WK+
Sbjct: 64 EKGNDAVVELIREQQAVDMTYEVLEATKIGHTVSALRKSAPTALAHLLADTLYRQWKETG 123
Query: 193 D-EWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDF-AYSPNPHNGSSGSDKNNSEP 250
+W +L + SS D QNG P + H+ ++ +K+
Sbjct: 124 KPDWCRL----MIISSEASDPTPVSNDTTQNGGDSRPQANCTATTSHHPTNAHNKDVCP- 178
Query: 251 ERKSKQAPLPRK----EALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARK 306
+ APL R ALS+ P S+S A ++ K + FD + R A A
Sbjct: 179 ---TGNAPLTRTVKSPTALSN--PVSSSGAC-------KKGKGEAPTDFD-EERPAKATV 225
Query: 307 RLQENYKREENAKRQRTIQVMDIHEIPKP 335
RL E K AK +R + +++ E KP
Sbjct: 226 RLHEGNKEASVAKEKRKTKQVNVKEPGKP 254
>gi|320582848|gb|EFW97065.1| General transcription elongation factor TFIIS [Ogataea
parapolymorpha DL-1]
Length = 294
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSEDA--LIDLLQSLA-DMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
E+K ++ D+++D +++LL+ L ++ T K L+ET +G VN+LR H+ +V LV
Sbjct: 5 EVKSVIKSLDKAQDTKTIVELLEVLKKEVVATEKFLRETKVGVAVNKLRTHADVEVSSLV 64
Query: 182 KHLVRKWKDIV 192
K ++++WK+ V
Sbjct: 65 KKIIKQWKEQV 75
>gi|301102939|ref|XP_002900556.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101819|gb|EEY59871.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 507
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
++ ILE+K +E+ D S D ++ L L +M +T LK+T I R V++LR+H ++ V
Sbjct: 425 KEEILELKLKVENADTSHDEMLVCLNQLGEMPLTIDHLKKTGIARAVSKLRQHGNDKVSA 484
Query: 180 LVKHLVRKWKDIVDE 194
L +KW ++E
Sbjct: 485 KAHELRQKWIKQINE 499
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 4 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 57
>gi|365986008|ref|XP_003669836.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
gi|343768605|emb|CCD24593.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
Length = 308
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 12/116 (10%)
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDI-TFKALKETDIGRHVNQLRKHSSNDV 177
E K + + ++LE ++ ++++L L + T K L+ET +G VN+ +K S+ +
Sbjct: 5 EAKEVAVLVKNLEKSKHNDSTVLEILLKLNREVVPTEKLLRETKVGVEVNKFKKSSNEQI 64
Query: 178 RKLVKHLVRKWKDIVDEWVKLN-QPGELASSAMMDGDSPQQKIPQNGNH---QVPD 229
K+VK ++ WKD +++ KL Q + A +A ++ + QNG++ QVPD
Sbjct: 65 AKVVKKMISSWKDTINKNKKLRLQQQKEAEAAKLNSN-------QNGSNTTTQVPD 113
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN LRK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|426215588|ref|XP_004002053.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Ovis aries]
Length = 208
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 12/111 (10%)
Query: 102 IENDNDIIDPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMD 151
I+N DP G ++ + KR++ I K LE PDQS++ L++ L+ L
Sbjct: 11 IQNSPQKKDPGGKIYKQATIESLKRVVVIEDIKRWKTMLELPDQSKENLVEALRELKKKI 70
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPG 202
+ + LK T IG VN++R+HS ++V L + + +W+ + + V N+P
Sbjct: 71 PSQEVLKSTKIGHAVNKMRQHSDSEVACLAREVYTEWRTFMKKHV--NRPS 119
>gi|348670604|gb|EGZ10425.1| hypothetical protein PHYSODRAFT_518807 [Phytophthora sojae]
Length = 525
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
IL KE LE+ + S D L+ L L M +T + LKET I R V++LR+H ++ V +
Sbjct: 438 ILSHKEKLENSETSHDELLVCLNQLDQMVVTIEHLKETAIARAVSKLRQHGNDKVSAKAQ 497
Query: 183 HLVRKW 188
L +KW
Sbjct: 498 ELRQKW 503
>gi|380018847|ref|XP_003693332.1| PREDICTED: uncharacterized protein LOC100869589 isoform 3 [Apis
florea]
Length = 516
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
++D++ +L IT + L+ T +G+++N+LR+ +SND + K K LVR+W+D+V
Sbjct: 4 VVDVITALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMV 57
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN LRK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN LRK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|383861966|ref|XP_003706455.1| PREDICTED: uncharacterized protein LOC100879604 isoform 1
[Megachile rotundata]
Length = 539
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A++D++ +L IT + L+ T +G+++N+LR+ ++ND + K K LVR+W+D+V
Sbjct: 27 AVVDVITALEKTAITKEVLEITRLGKYINELRRKTNNDALAKRAKDLVRRWRDMV 81
>gi|410080934|ref|XP_003958047.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
gi|372464634|emb|CCF58912.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
Length = 323
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
K ++ + + LE +D ++ +L+ L +D+ T K L+ET +G VN+ +K S+ ++ K
Sbjct: 4 KEVIVLVKTLEKNKSDDDTILRILKQLDSDVVPTEKLLRETKVGVEVNKFKKSSNAEISK 63
Query: 180 LVKHLVRKWKDIVDE 194
LVK ++ WKD +++
Sbjct: 64 LVKKMITSWKDAINK 78
>gi|380018843|ref|XP_003693330.1| PREDICTED: uncharacterized protein LOC100869589 isoform 1 [Apis
florea]
Length = 540
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
++D++ +L IT + L+ T +G+++N+LR+ +SND + K K LVR+W+D+V
Sbjct: 28 VVDVITALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMV 81
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 1 MDLLRELKAMPITLHLLQSTRVGMSVNTLRKQSSDEEVIALAKSLIKSWKKLLD 54
>gi|380018845|ref|XP_003693331.1| PREDICTED: uncharacterized protein LOC100869589 isoform 2 [Apis
florea]
Length = 530
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
++D++ +L IT + L+ T +G+++N+LR+ +SND + K K LVR+W+D+V
Sbjct: 18 VVDVITALEKTAITKEVLEVTRLGKYINELRRKTSNDALAKRAKDLVRRWRDMV 71
>gi|444728031|gb|ELW68495.1| Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
3 [Tupaia chinensis]
Length = 1027
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++K +L I + LE +S + +DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 929 QEKELLRIAKKLEKMVARKSTEGALDLLKKLNSCRMSIQLLQTTRIGVAVNGVRKHCSDK 988
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 989 EVVSLAKVLIKNWKRLLD 1006
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
+DE RI + + +D +DLL++L ++I L +T IG VN+LRK S +D
Sbjct: 4 EDEVFRIQKKMSKMASDGTGQDQALDLLKTLQTLNINLDILTKTRIGMTVNELRKSSKDD 63
Query: 177 -VRKLVKHLVRKWKDIV 192
V L K L++ WK +
Sbjct: 64 EVIALAKTLIKNWKRFL 80
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
D +DLL+ L +M ++ + L+ T +G VN +RK SS+ +V+ + K L++ WK ++D
Sbjct: 24 DGALDLLRELRNMKMSLEMLQSTRVGMSVNAVRKQSSDEEVQNIAKSLIKSWKKLLD 80
>gi|383861968|ref|XP_003706456.1| PREDICTED: uncharacterized protein LOC100879604 isoform 2
[Megachile rotundata]
Length = 529
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A++D++ +L IT + L+ T +G+++N+LR+ ++ND + K K LVR+W+D+V
Sbjct: 17 AVVDVITALEKTAITKEVLEITRLGKYINELRRKTNNDALAKRAKDLVRRWRDMV 71
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L M IT L+ T +G VN LRK SS+ +V L K L++ WK ++D
Sbjct: 1 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLD 54
>gi|291399284|ref|XP_002716070.1| PREDICTED: elongin A [Oryctolagus cuniculus]
Length = 739
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 123 ILEIKEHLED------PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
+L I+E LE ++E +L+ L+ L+ + IT L ET +GR VN LRKH
Sbjct: 1 MLGIREKLESVRLRRLLRRAEASLLKYLKKLSALPITVDILAETGVGRMVNSLRKH--EH 58
Query: 177 VRKLVKHLVRKWKDIV 192
V + LV +WK +V
Sbjct: 59 VGGFARELVAQWKKLV 74
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VR 178
QK+I +I + Q D +DLL++L ++I + L +T IG VN+LRK S +D V
Sbjct: 11 QKKIGKISTSSDGAGQ--DQALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVI 68
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASS 207
L K L++ WK + P E A+S
Sbjct: 69 ALAKTLIKNWKRFLASPAPPGTPKESAAS 97
>gi|397629130|gb|EJK69212.1| hypothetical protein THAOC_09547 [Thalassiosira oceanica]
Length = 286
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
+ ++D+L+ L D+T L ET IG V +L+KHS DV LV+KWK +
Sbjct: 28 EKILDILERLDKTDVTLSILTETLIGASVAKLKKHSDVDVSSAAAKLVKKWKSV 81
>gi|344304668|gb|EGW34900.1| hypothetical protein SPAPADRAFT_131482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 296
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EIK + + ++S D ++ LL L D + + K L+ET +G VN+ R H ++++ LV
Sbjct: 5 EIKSTISNLEKSTDDTTILKLLNILNDGVKPSEKVLRETKVGVAVNKFRSHENSEISNLV 64
Query: 182 KHLVRKWKDIV 192
K ++R W+D V
Sbjct: 65 KKMIRNWRDAV 75
>gi|431896917|gb|ELK06181.1| hypothetical protein PAL_GLEAN10023779 [Pteropus alecto]
Length = 208
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 102 IENDNDIIDPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMD 151
I+N DP G ++ + KR++ I K LE PDQ+++ L++ L+ L
Sbjct: 11 IQNSPQKKDPGGKIYKQATIESLKRVVVIEDIKRWKTTLELPDQTKENLVEALRELKKKI 70
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
+ + LK T IG VN++R+HS ++V L + + +W+ +++
Sbjct: 71 PSKEVLKSTRIGHTVNKMRQHSDSEVACLAREVYTEWRTFIEK 113
>gi|12848458|dbj|BAB27962.1| unnamed protein product [Mus musculus]
Length = 228
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L+ LQ L + + L+ T IG VN++R+HS +V L K +
Sbjct: 45 KTMLELPDQTKENLVAALQELKKKMPSREVLRSTRIGHAVNKMRRHSDPEVAGLAKEVYT 104
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 105 EWKTFIEK 112
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVDE 194
D +DLL+ L ++T + L+ET IG VN +RKH ++ +V L K L++ WK ++++
Sbjct: 24 DGAMDLLRELKSFNMTLRLLQETRIGVSVNSIRKHCTDEEVIALAKVLIKDWKRLLED 81
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|294656076|ref|XP_458316.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
gi|199430838|emb|CAG86394.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
Length = 290
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EIK + D+S D ++ LL L D ++ T K L+ET +G VN+ R +S+ +V LV
Sbjct: 5 EIKSAVSSLDKSTDDATILKLLNILNDGVEPTEKLLRETKVGVAVNKFRGNSNPEVSSLV 64
Query: 182 KHLVRKWKDIV 192
K ++R W+++V
Sbjct: 65 KKMIRNWREVV 75
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN LRK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L I LE ++ + +DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 QEEELLRIARKLEKMVARKNTEGALDLLKKLDSCQMSIRLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPN 235
+V L K L++ WK ++D PG P+ + D A
Sbjct: 63 EVVSLAKVLIKNWKRLLD------SPGP----------------PKGEKREERDKAKKEK 100
Query: 236 PHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRES 293
N S + P RK ++ P R++++ S+ ++SP P S++R K E+
Sbjct: 101 GLNCSDWKPEAGLSPPRKKREDPKDRRDSVDSKSSATSSPKRP-SMERSNSSKSKAET 157
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 123 ILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRK 179
I+ I + ++ Q ++A +DLL+ L ++ +T + L+ T IG VN +RK S++ +V
Sbjct: 7 IIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQTTRIGMSVNAIRKQSTDEEVTS 66
Query: 180 LVKHLVRKWKDIVD 193
L K L++ WK ++D
Sbjct: 67 LAKSLIKSWKKLLD 80
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 123 ILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRK 179
I+ I + ++ Q ++A +DLL+ L ++ +T + L+ T IG VN +RK S++ +V
Sbjct: 7 IIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTS 66
Query: 180 LVKHLVRKWKDIVD 193
L K L++ WK ++D
Sbjct: 67 LAKSLIKSWKKLLD 80
>gi|297733825|emb|CBI15072.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 131 EDPDQS-EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
+D D+S E+ L+ LL++L + + +AL+ +IG+ VN LR H + +++K + LV WK
Sbjct: 346 KDSDKSVEEFLLVLLRALDKLPVNLQALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWK 405
Query: 190 DIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSS 241
V+ + +N +S A+ P ++ + ++ N H+G S
Sbjct: 406 KRVEAEMNINDAKSGSSQAVAWSSRP----------RLSEVSHGGNRHSGGS 447
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|359491606|ref|XP_003634295.1| PREDICTED: uncharacterized protein LOC100248456 [Vitis vinifera]
Length = 1631
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 131 EDPDQS-EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
+D D+S E+ L+ LL++L + + +AL+ +IG+ VN LR H + +++K + LV WK
Sbjct: 346 KDSDKSVEEFLLVLLRALDKLPVNLQALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWK 405
Query: 190 DIVDEWVKLN 199
V+ + +N
Sbjct: 406 KRVEAEMNIN 415
>gi|383850102|ref|XP_003700656.1| PREDICTED: transcription elongation factor B polypeptide 3-like
isoform 2 [Megachile rotundata]
Length = 746
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I + ++E D +ED ++ + L+++ +T + L+ET +GR VN LRK+ +
Sbjct: 6 KIKHYQRNIEKCDDNEDRILHCISKLSNLPVTVQHLQETGVGRTVNALRKYEGG-IGDAA 64
Query: 182 KHLVRKWKDIV 192
K LV KWK +V
Sbjct: 65 KALVAKWKTMV 75
>gi|118103328|ref|XP_001234571.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Gallus gallus]
Length = 602
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +GR +N++RK +SN ++ K K L+R W+ +++
Sbjct: 19 AVLEVISSLEKYPITKEALEETRLGRLINEVRKKTSNEELAKRAKKLLRNWQKLIE 74
>gi|73956434|ref|XP_853240.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Canis lupus familiaris]
Length = 208
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 110 DPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMDITFKALKE 159
DP G ++ + KR++ I K LE PDQ++ L++ LQ L + + LK
Sbjct: 19 DPAGKIYKQATIESLKRVVVIEDIKRWKTMLELPDQTKQNLVEALQELKKKIPSREVLKS 78
Query: 160 TDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
T IG VN++R+HS +V L + + +W+ +++
Sbjct: 79 TRIGHTVNKMRQHSDPEVACLAREVYTEWRTFIEK 113
>gi|325189081|emb|CCA23608.1| ATPdependent helicase putative [Albugo laibachii Nc14]
gi|325189673|emb|CCA24157.1| ATPdependent helicase putative [Albugo laibachii Nc14]
Length = 2194
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
++ E + + + ++ +L+ L MDIT + L+ T +G+ VN+LRK++ V + L
Sbjct: 1349 LRAQTEADETTSERILAILERLTCMDITLENLRVTKLGKLVNRLRKNNDQAVVVRAEKLK 1408
Query: 186 RKWKDIVDEWVKLNQPGELASSAM 209
+KWK+++ E VK P + S +
Sbjct: 1409 KKWKNMLQENVKSVAPPKFCSELL 1432
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 LEEELLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSD 61
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 62 KEVVSLAKVLIKNWKRLLD 80
>gi|383850100|ref|XP_003700655.1| PREDICTED: transcription elongation factor B polypeptide 3-like
isoform 1 [Megachile rotundata]
Length = 773
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I + ++E D +ED ++ + L+++ +T + L+ET +GR VN LRK+ +
Sbjct: 6 KIKHYQRNIEKCDDNEDRILHCISKLSNLPVTVQHLQETGVGRTVNALRKYEGG-IGDAA 64
Query: 182 KHLVRKWKDIV 192
K LV KWK +V
Sbjct: 65 KALVAKWKTMV 75
>gi|326934588|ref|XP_003213370.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Meleagris gallopavo]
Length = 602
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +GR +N++RK +SN ++ K K L+R W+ +++
Sbjct: 19 AVLEVISSLEKYPITKEALEETRLGRLINEVRKKTSNEELAKRAKKLLRNWQKLIE 74
>gi|307197644|gb|EFN78823.1| Mediator of RNA polymerase II transcription subunit 26
[Harpegnathos saltator]
Length = 573
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
++D++ L IT + L+ T +G+H+N+LR+ + ND + + K LVR+W+D+V
Sbjct: 27 VVVDIISVLEKTTITKEVLEVTRLGKHINELRRKTDNDALARRAKDLVRRWRDMV 81
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|380012074|ref|XP_003690114.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor B
polypeptide 3-like [Apis florea]
Length = 743
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I + ++E D +ED +I + L+++ +T K L++T +GR VN LRK+ V
Sbjct: 6 KIKHYQRNIEKCDDNEDKVIYCISKLSNLPVTVKHLQDTGVGRTVNGLRKYDGG-VGNAA 64
Query: 182 KHLVRKWKDIV 192
K LV KWK +V
Sbjct: 65 KALVAKWKAMV 75
>gi|147817646|emb|CAN60153.1| hypothetical protein VITISV_021504 [Vitis vinifera]
Length = 1688
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 131 EDPDQS-EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
+D D+S E+ L+ LL++L + + +AL+ +IG+ VN LR H + +++K + LV WK
Sbjct: 390 KDSDKSVEEFLLVLLRALDKLPVNLQALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWK 449
Query: 190 DIVDEWVKLNQPGELASSAMMDGDSPQ-QKIPQNGN 224
V+ + +N +S A+ P+ ++ GN
Sbjct: 450 KRVEAEMNINDAKSGSSQAVAWSSRPRLSEVSHGGN 485
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-NDVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S DV L K L++ WK ++D
Sbjct: 28 LDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEDVTSLAKALIKSWKKLLD 81
>gi|393246595|gb|EJD54104.1| hypothetical protein AURDEDRAFT_110720 [Auricularia delicata
TFB-10046 SS5]
Length = 806
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 134 DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH-SSNDVRKLVKHLVRKWKDIV 192
D+S D LI LL + + +T + LKET +GR++ L K SN ++ + L + W++IV
Sbjct: 269 DESNDGLIALLHVINRLPLTVELLKETKLGRYIKHLMKEPPSNAIKSVAHELEKSWREIV 328
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VR 178
QK+I +I + Q D +DLL++L ++I + L +T IG VN+LRK S +D V
Sbjct: 11 QKKIGKISTSSDGAGQ--DQALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVI 68
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASS 207
L K L++ WK + P E A S
Sbjct: 69 ALAKTLIKNWKRFLASPAPPGTPKESAGS 97
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L +M IT L+ T +G VN LRK SS+ ++ L K L++ WK ++D
Sbjct: 1 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLD 54
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L +M IT L+ T +G VN LRK SS+ ++ L K L++ WK ++D
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLD 80
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 123 ILEIKEHLEDPDQSE----DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
+ IK+ LE E + ++DLL +L D+ +T + L++T +G HVN +RK + +V
Sbjct: 7 VTRIKKQLEKALNREIVDNEFILDLLTNLKDLKMTLEILQKTRVGYHVNNVRKKADKEVV 66
Query: 179 -KLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDS 214
L K L++ WK ++ + K N+ + S MD DS
Sbjct: 67 INLAKSLIKDWKRLLPDSKK-NEAKDKTDSRQMDKDS 102
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L +M IT L+ T +G VN LRK SS+ ++ L K L++ WK ++D
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLD 80
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 LEEELLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSD 61
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 62 KEVVSLAKVLIKNWKRLLD 80
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 112 YGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRK 171
GG +DE RI + + +E A+ DLL+ L M +T L+ T IG VN LRK
Sbjct: 1 MGG--EDEIVRIARRLDKMVAKKNAEGAM-DLLKELKSMPMTLDLLQSTRIGMSVNALRK 57
Query: 172 HSSN-DVRKLVKHLVRKWKDIVD 193
S++ +V L K L++ WK ++D
Sbjct: 58 QSTDEEVISLAKSLIKSWKKLLD 80
>gi|270009169|gb|EFA05617.1| hypothetical protein TcasGA2_TC015824 [Tribolium castaneum]
Length = 498
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
A+I+++ L + IT + L+ T +G+HVN+LR+ + ND + K K LV+KW+++V
Sbjct: 44 AVIEIVSLLEKVTITKELLETTRLGKHVNELRRKTDNDSLSKRAKELVKKWRNMV 98
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 70 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 123
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 123 ILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRK 179
I+ I + ++ Q ++A +DLL+ L ++ +T + L+ T IG VN +RK S++ +V
Sbjct: 5 IIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTS 64
Query: 180 LVKHLVRKWKDIVD 193
L K L++ WK ++D
Sbjct: 65 LAKSLIKSWKKLLD 78
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 123 ILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRK 179
I+ I + ++ Q ++A +DLL+ L ++ +T + L+ T IG VN +RK S++ +V
Sbjct: 5 IIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTS 64
Query: 180 LVKHLVRKWKDIVD 193
L K L++ WK ++D
Sbjct: 65 LAKSLIKSWKKLLD 78
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 LEEELLRIAKKLEKMVARKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSD 61
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 62 KEVVSLAKVLIKNWKRLLD 80
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQ 200
+DLL++L IT LKET +G+ V +LRKH S ++ ++L+ WK I+ + N
Sbjct: 26 LDLLRALESKPITVNILKETKLGQTVAKLRKHDSEKIQNQSRNLIHSWKSILTLSPRTNS 85
Query: 201 PGELASSA 208
L+ +A
Sbjct: 86 SSSLSPTA 93
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L +M IT L+ T +G VN LRK SS+ ++ L K L++ WK ++D
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLD 80
>gi|332247941|ref|XP_003273122.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Nomascus leucogenys]
Length = 208
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L++ LQ L + + LK T IG VN++ KHS ++V L + +
Sbjct: 46 KTMLELPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMCKHSDSEVASLAREVYT 105
Query: 187 KWKDIVD 193
+WK ++
Sbjct: 106 EWKTFIE 112
>gi|198451405|ref|XP_001358350.2| GA19837, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131475|gb|EAL27489.2| GA19837, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 699
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I++H ED E L+ + L ++ I F+ L+ET IG+ VN LRK + +V + LV
Sbjct: 18 IEKHGED----EKRLMHCITKLFNLPIKFEHLQETGIGKTVNALRKF-NGEVGVAARTLV 72
Query: 186 RKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQV---PDFAYSPNPHNGSSG 242
+WK +V +P E SA+ + NG P+ Y + N SSG
Sbjct: 73 TRWKAMV---AAEEEPAEPTPSAIGTTSHEEDSGKSNGRRSSEDEPELEYKGS--NSSSG 127
Query: 243 SDKNNSEPERKS 254
+ +S +RKS
Sbjct: 128 GEDGHSSSKRKS 139
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 123 ILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRK 179
I+ I + ++ Q ++A +DLL+ L ++ +T + L+ T IG VN +RK S++ +V
Sbjct: 5 IIRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTS 64
Query: 180 LVKHLVRKWKDIVD 193
L K L++ WK ++D
Sbjct: 65 LAKSLIKSWKKLLD 78
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 27 LDLLKELKNIPMTLELLQTTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 80
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 LEEELLRIAKKLEKMVARKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSD 61
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 62 KEVVSLAKVLIKNWKRLLD 80
>gi|149033908|gb|EDL88691.1| transcription elongation factor A (SII), 2 [Rattus norvegicus]
Length = 180
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L +M IT L+ T +G VN LRK SS+ ++ L K L++ WK ++D
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLD 80
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 138 DALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
D +I+LLQ+L D M T ++ T IG V +LR H + V +L K +V+KWK V +
Sbjct: 23 DVIIELLQTLKDEMTATEDLIRVTKIGLAVGKLRSHDNKQVSELSKEIVKKWKQDVTKKP 82
Query: 197 KLNQP-GELASSAMMDGDSPQQKIPQNGNHQVPDF 230
K P E ++ + P Q P++G DF
Sbjct: 83 KAAAPSAESTTTPAKPSEKPDQ--PRSGKTDGVDF 115
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 123 ILEIKEHLEDPDQ--SEDALIDLLQSLA-DMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
++E+K+ ++ Q S+ ID+LQ L + IT L+E+ G V +LR H++ +V +
Sbjct: 4 VIELKKLVKSLQQASSDKETIDVLQVLKKEAKITEAILRESKAGLAVGKLRSHATKEVSE 63
Query: 180 LVKHLVRKWKDIVDE 194
L K +VR+WK VD+
Sbjct: 64 LAKEVVRQWKTEVDK 78
>gi|340722495|ref|XP_003399640.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Bombus terrestris]
Length = 764
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I + ++E D +ED ++ + L+++ +T + L+ET +GR VN LRK+ +
Sbjct: 6 KIKHYQRNIEKCDDNEDRILHCISKLSNLPVTVQHLQETGVGRTVNALRKYDGG-IGDAA 64
Query: 182 KHLVRKWKDIV 192
K LV KWK +V
Sbjct: 65 KALVAKWKAMV 75
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+ L M +T L+ T +G VN LRK SS+ ++ L K L++ WK ++D
Sbjct: 21 KSAEGAMDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLD 80
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 123 ILEIKEHLEDPDQSED--ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-NDVRK 179
I+ I + +E Q ++ +DLL+ L ++ +T + L+ T IG VN +RK S +V
Sbjct: 9 IIHIAKKMERMVQKKNTAGALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEEVTS 68
Query: 180 LVKHLVRKWKDIVD 193
L K L++ WK ++D
Sbjct: 69 LAKSLIKSWKKLLD 82
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|350418466|ref|XP_003491866.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Bombus impatiens]
Length = 764
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I + ++E D +ED ++ + L+++ +T + L+ET +GR VN LRK+ +
Sbjct: 6 KIKHYQRNIEKCDDNEDRILHCISKLSNLPVTVQHLQETGVGRTVNALRKYDGG-IGDAA 64
Query: 182 KHLVRKWKDIV 192
K LV KWK +V
Sbjct: 65 KALVAKWKAMV 75
>gi|119607147|gb|EAW86741.1| transcription elongation factor A (SII), 1, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 11 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 64
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VR 178
QK+I +I + Q D +DLL++L ++I + L +T IG VN+LRK S +D V
Sbjct: 11 QKKIGKISTSSDGTGQ--DQALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVI 68
Query: 179 KLVKHLVRKWKDIV 192
L K L++ WK +
Sbjct: 69 ALAKTLIKNWKRFL 82
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|222623658|gb|EEE57790.1| hypothetical protein OsJ_08341 [Oryza sativa Japonica Group]
Length = 1564
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMD 211
I AL+ IG+ VN LR H + +++K K LV WK VD +K N + S
Sbjct: 352 INLNALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDAEMKSNDAKPVVSG---- 407
Query: 212 GDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQ 271
Q + G P FA + N SGS SEP KS + L +AL+ +P
Sbjct: 408 -----QAVSWPGK---PGFAEISSAGNRRSGS----SEPNLKSPVSQLSSSKALTVKPGA 455
Query: 272 S 272
S
Sbjct: 456 S 456
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 11 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 64
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 118 DEQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
D+++ +L+I + LE ++ + +DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 2 DQEEELLKITKKLEKMVAKRNMEGALDLLKKLDSYQMSIQLLQTTRIGVAVNGIRKHCSD 61
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 62 KEVVALAKILIKNWKQLLD 80
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 4 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 57
>gi|367015614|ref|XP_003682306.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
gi|359749968|emb|CCE93095.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
Length = 295
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDI--TFKALKETDIGRHVNQLRKHSSND 176
E K ++ ++LE +++ ++ +LQ+L D ++ T K L+ET +G VN+ +K S+ +
Sbjct: 3 ESKEVIVQVKNLEKSKTNDEVVLHILQAL-DKEVVPTEKLLRETKVGVEVNKFKKSSNPE 61
Query: 177 VRKLVKHLVRKWKDIVD 193
+ KLVK ++ WKD ++
Sbjct: 62 IAKLVKKMITSWKDAIN 78
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
++ +DLL+ L +++ + L+ T IG VN +RKH S+ +V L K L+R WK ++D
Sbjct: 61 QEGALDLLKKLNSCEMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIRNWKRLLD 118
>gi|332244802|ref|XP_003271560.1| PREDICTED: transcription elongation factor A protein 3 [Nomascus
leucogenys]
Length = 295
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L I + LE ++ + +DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 QEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPN 235
+V L K L++ WK ++D PG GD ++ + D+
Sbjct: 63 EVVSLAKVLIKNWKRLLDS------PGPPKGE---KGDEREKAKKKEKGLDRSDW----K 109
Query: 236 PHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQR 283
P G S P RK ++ P R++++ S+ ++SP P SV+R
Sbjct: 110 PEAGLS--------PPRKKREDPKTRRDSVDSKSSATSSPKRP-SVER 148
>gi|218191559|gb|EEC73986.1| hypothetical protein OsI_08895 [Oryza sativa Indica Group]
Length = 1641
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMD 211
I AL+ IG+ VN LR H + +++K K LV WK VD +K N + S
Sbjct: 429 INLNALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDAEMKSNDAKPVVSG---- 484
Query: 212 GDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQ 271
Q + G P FA + N SGS SEP KS + L +AL+ +P
Sbjct: 485 -----QAVSWPGK---PGFAEISSAGNRRSGS----SEPNLKSPVSQLSSSKALTVKPGA 532
Query: 272 S 272
S
Sbjct: 533 S 533
>gi|328767604|gb|EGF77653.1| hypothetical protein BATDEDRAFT_91451 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 122 RILEIKEHLEDP--DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH--SSNDV 177
+I ++KEHL D E +I LL +L T + LK T IG +LRKH ++ +
Sbjct: 10 QIPKLKEHLTKALADNKEQIVIQLLTTLRTFKATTETLKSTRIGVFATELRKHPNATEKI 69
Query: 178 RKLVKHLVRKWK 189
++L + LV KWK
Sbjct: 70 KQLSRELVYKWK 81
>gi|326916406|ref|XP_003204498.1| PREDICTED: hypothetical protein LOC100543557 [Meleagris gallopavo]
Length = 1033
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+ ++ +L+ L D+DI+ L ET IG+ VN RKH++ + K LV+KWK ++
Sbjct: 20 EKILRVLELLQDLDISLDILTETGIGKTVNSFRKHAT--AGNVAKSLVKKWKKLI 72
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|348522026|ref|XP_003448527.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Oreochromis niloticus]
Length = 207
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
I+ K LE P+QS+D L+ L+ L+ + + LK T IG VN++RKH ++V +
Sbjct: 41 IMRYKSMLELPEQSKDNLLTALKELSKKVPSKEVLKSTKIGHTVNKMRKHLDHEVSSMAA 100
Query: 183 HLVRKWKDIVDE 194
+ W+ ++E
Sbjct: 101 KVYTDWRTFIEE 112
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L M +T L+ T IG VN LRK S++ +V L K L++ WK ++D
Sbjct: 1 MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVIALAKSLIKSWKKLLD 54
>gi|449441029|ref|XP_004138286.1| PREDICTED: uncharacterized protein LOC101210258 [Cucumis sativus]
Length = 1606
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 131 EDPDQS-EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
+D D+S E+ L+ LL++L + + AL+ +IG+ VN LR H + +++K + LV WK
Sbjct: 355 KDSDKSVEEFLLVLLRALDKLPVNLPALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWK 414
Query: 190 DIVDEWVKLN 199
V+ + +N
Sbjct: 415 KRVEAEMNIN 424
>gi|344278662|ref|XP_003411112.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Loxodonta africana]
Length = 208
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
LE PDQ+++ L++ LQ L + + LK T IG VN++RKHS ++V L + + +W+
Sbjct: 49 LELPDQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVACLAREVYTEWR 108
Query: 190 DIVDE 194
+++
Sbjct: 109 TFMEK 113
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 LEEEPLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSD 61
Query: 176 DVR-KLVKHLVRKWKDIVD 193
V L K L++ WK ++D
Sbjct: 62 KVLVSLAKVLIKNWKRLLD 80
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 14 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 67
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVIRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLADMDI-TFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EIK + + ++S D ++ LL L D + T K L+ET +G VN+ R H + D+ LV
Sbjct: 5 EIKSTISNLEKSVDDITILKLLNILNDEVVPTEKLLRETKVGVVVNKYRSHDNKDISTLV 64
Query: 182 KHLVRKWKDIV 192
K ++R W++ V
Sbjct: 65 KKMIRGWREAV 75
>gi|340376285|ref|XP_003386664.1| PREDICTED: serine/threonine-protein phosphatase 1 regulatory
subunit 10-like [Amphimedon queenslandica]
Length = 675
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
L+++LQ L + ++ ALK+ ++G+ V QL KH S +V+ L ++ KW + E
Sbjct: 108 LLEILQVLQKLPVSIVALKQGNLGKLVKQLSKHESPEVKSLANDILSKWMAVFRE 162
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 90 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 143
>gi|449526349|ref|XP_004170176.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101224819 [Cucumis sativus]
Length = 1599
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 131 EDPDQS-EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
+D D+S E+ L+ LL++L + + AL+ +IG+ VN LR H + +++K + LV WK
Sbjct: 348 KDSDKSVEEFLLVLLRALDKLPVNLPALQMCNIGKSVNHLRSHKNLEIQKKARSLVDTWK 407
Query: 190 DIVDEWVKLN 199
V+ + +N
Sbjct: 408 KRVEAEMNIN 417
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 14 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 67
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+ E +RI + + + + +E AL DLL+ L ++ ++ + L+ T +G VN +RK SS+
Sbjct: 4 NQEVERIAKKLDKMVQKENTEGAL-DLLKELQNIKMSLETLQSTRVGMSVNAVRKQSSDE 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V+ L K L++ WK ++D
Sbjct: 63 EVQTLAKSLIKSWKRLLD 80
>gi|363755550|ref|XP_003647990.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892026|gb|AET41173.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
Length = 306
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 128 EHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
++LE +ED ++ +L+ L ++ T K L+ET +G VNQ +K ++ ++ KLVK ++
Sbjct: 11 KNLEKNKSNEDTVLQILKILDKELVATEKLLRETKVGVIVNQFKKSANEEISKLVKKMIS 70
Query: 187 KWKDIV 192
WKD +
Sbjct: 71 AWKDAI 76
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|55154476|gb|AAH85215.1| LOC495514 protein, partial [Xenopus laevis]
Length = 348
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 123 ILEIKEHLED---PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+LE+ E L+ P L L+ L D+ IT L ET IG+ VN LRKH V
Sbjct: 4 VLEVVEKLQSRLSPSAEPRKLQKTLKRLVDLPITVDILVETGIGKTVNSLRKHEF--VGD 61
Query: 180 LVKHLVRKWKDIV 192
L K+LV +WK +V
Sbjct: 62 LAKNLVAQWKKLV 74
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|449674744|ref|XP_002160057.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Hydra magnipapillata]
Length = 212
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 43/67 (64%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
++ +K L P+Q+ D L+ L +L + + + L ET +G +N+LRKH + +V++L +
Sbjct: 44 MIHVKNILSMPEQTIDQLVSCLTNLENRIPSKEVLLETKLGHVINKLRKHEAEEVQQLAQ 103
Query: 183 HLVRKWK 189
+++KWK
Sbjct: 104 KVLQKWK 110
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 78
>gi|350539011|ref|NP_001232124.1| putative transcription elongation factor A2 [Taeniopygia guttata]
gi|197129380|gb|ACH45878.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 229
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 112 YGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRK 171
GG +DE RI + + +E A+ DLL+ L M +T L+ T IG VN LRK
Sbjct: 1 MGG--EDEIVRIARRLDKMVAKKNAEGAM-DLLKELKSMPMTLDLLQSTRIGMSVNALRK 57
Query: 172 HSSN-DVRKLVKHLVRKWKDIVD 193
S++ +V L K L++ WK ++D
Sbjct: 58 QSTDEEVISLAKSLIKSWKKLLD 80
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIV 192
+DLL++L ++ IT + L+ T IG VN LRK SS+ +V L K L++ WK ++
Sbjct: 51 LDLLKNLQELPITLEILQRTRIGMTVNSLRKSSSDEEVITLAKVLIKSWKKLL 103
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN +RK S++
Sbjct: 1 MEDEVIRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|118088956|ref|XP_419908.2| PREDICTED: transcription elongation factor B polypeptide 3 [Gallus
gallus]
Length = 598
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
++ L+ L D+DI+ L ET IG+ VN RKH++ + K LV+KWK ++
Sbjct: 28 ILKALELLQDLDISLDILTETGIGKTVNSFRKHATAG--NVAKSLVKKWKKLL 78
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHL 184
I+ ++ +Q +DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L
Sbjct: 12 IQPSIDIVEQVSAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSL 71
Query: 185 VRKWKDIVD 193
++ WK ++D
Sbjct: 72 IKSWKKLLD 80
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN LRK S++
Sbjct: 1 MEDEVVRIAKKMDKMVQKKNAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNALRKQSTD 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK +++
Sbjct: 60 EEVTSLAKSLIKSWKKLLN 78
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 110 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 163
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
++E RI + + +D +DLL++L ++I L +T IG VN+LRK S +D
Sbjct: 4 EEEVFRIQKKMSKMASDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDD 63
Query: 177 -VRKLVKHLVRKWKDIV 192
V L K L++ WK +
Sbjct: 64 EVIALAKTLIKNWKRFL 80
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 4 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 57
>gi|325192517|emb|CCA26950.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 553
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDAL----IDLLQSLADMDITFKALKETDIGRHVNQLRKH 172
+D K+I ++ L D ++ L I +L+ L+ M + + LK T +GR +++L+KH
Sbjct: 473 EDLGKQITSLQCMLTDAGDVKNILSSLAIHVLKKLSGMTLNVEVLKSTGVGRIISKLKKH 532
Query: 173 SSNDVRKLVKHLVRKWK 189
+V +L + L++KWK
Sbjct: 533 KDGEVSRLAQILIKKWK 549
>gi|125525425|gb|EAY73539.1| hypothetical protein OsI_01421 [Oryza sativa Indica Group]
Length = 195
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 14 GVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFGNG-VVDVNKEI 72
G D++ I AIL+A D EL RR I+E L+A + G VVD
Sbjct: 19 GADIYDVIRNAILIAGADSPRELLRRRQGIIEWLFAVAPVTVPVPAPLACGRVVD----- 73
Query: 73 SRGQHDEVKAAQQASPSTPHSVNGDDDI-DIENDNDIIDP--YGGLFDDEQK------RI 123
G + + A H + D + E +ID L+D+ ++ +
Sbjct: 74 --GAGNRLPPAAIPDGGGHHHDDNDGNFAAAEAQTSLIDQQILEALYDEIEEDTQVINEV 131
Query: 124 LEIKEHLED-PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
L IK+ L + +QS D L D L+ L M ++ LK T I V L KH S + K+ +
Sbjct: 132 LRIKDILINYKEQSVDTLFDGLRRLQLMRLSISVLKSTQIAEAVAPLNKHRSPVICKIAR 191
Query: 183 HLVR 186
L +
Sbjct: 192 DLAK 195
>gi|348685682|gb|EGZ25497.1| transcription elongation factor [Phytophthora sojae]
Length = 305
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 134 DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
DQ E +++L++L +T+ LKET +G V +LRKH + + L + LV+ WK++
Sbjct: 21 DQGEA--LEVLRALEKTTVTYAILKETKMGHTVGKLRKHENEKIASLARLLVKSWKNMA 77
>gi|449283630|gb|EMC90235.1| Transcription elongation factor B polypeptide 3, partial [Columba
livia]
Length = 596
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+++ L+ L D+DI+ L ET IG+ VN RKH++ + K LV++WK ++
Sbjct: 17 IVETLKVLQDLDISLDILVETGIGKTVNSFRKHATAG--NVAKTLVKQWKKLI 67
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + +E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIAKKLEKMVARKHTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|55168107|gb|AAV43975.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 314
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 44/234 (18%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKW-----KDI 191
++ + + L +L + +T + L TD+ V LRKH S +R L +VR+W +D+
Sbjct: 67 DEVMAESLLTLRLVPVTPRTLATTDLAGVVGALRKHDSERIRGLATDIVRRWRAAVKRDL 126
Query: 192 VDEWV---KLNQPGELASSA--------MMDGDSPQQKIPQ---NGNHQVPDFAYSPNPH 237
V V KL+Q E +A G+ + Q +G H + + A NP
Sbjct: 127 VRIGVAMEKLSQTPERIEAADRPVSDLDAKHGEGLRAIAAQEECSGRHGLGNKAEGANPS 186
Query: 238 --------------NGSSGSDK-NNSEPERKSKQAPLPRKE---ALSSRPPQSAS----- 274
N S G +K + +RK +A RK A +++P S S
Sbjct: 187 AEEEAAGRRDGVKPNHSDGGEKLMTAATKRKLDEAQKRRKTADMAAAAKPEGSNSLPLLK 246
Query: 275 PAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
AP +V ++ES E D + ++A+A+++L+E Y+ E AK++R I V++
Sbjct: 247 MVAP-AVVASHGRRESIELHND-EEKIAAAKRKLREGYQDAEEAKKRRKIHVIE 298
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 132 DPDQSEDA-LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKD 190
D D++E+A ++D+L+ L +T LK T+ G+ +N+ KH+S+ V K K V WK
Sbjct: 25 DGDKAEEARMLDVLKQLQRRGVTADLLKRTNAGKRLNKFCKHASDAVSKSAKAAVEAWKQ 84
Query: 191 IV 192
V
Sbjct: 85 CV 86
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ +T + L+ T IG VN +RK S++ +V L K L++ WK ++D
Sbjct: 4 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 57
>gi|356500301|ref|XP_003518971.1| PREDICTED: uncharacterized protein LOC100776128 [Glycine max]
Length = 101
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 30/35 (85%)
Query: 300 RLASARKRLQENYKREENAKRQRTIQVMDIHEIPK 334
+L + +++LQE Y++ E AKRQRT+QVM++H++PK
Sbjct: 43 KLEATKRKLQERYQQAEKAKRQRTVQVMELHDLPK 77
>gi|291398844|ref|XP_002716014.1| PREDICTED: chromosome 1 open reading frame 83-like [Oryctolagus
cuniculus]
Length = 208
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
LE P+Q+++ L++ LQ L + + LK T IG VN++RKHS ++V L + +WK
Sbjct: 49 LELPNQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHSDSEVACLAGEVYTEWK 108
Query: 190 DIVDE 194
+++
Sbjct: 109 TFIEK 113
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + + + AL DLL+ L ++ +T + L+ T IG VN + K S+N
Sbjct: 1 MEDEIIRIAKKMDKMVQKKSAAGAL-DLLKELKNIPMTLELLQSTRIGMSVNAICKQSTN 59
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 60 EEVTSLAKSLIKSWKKLLD 78
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
++E RI + + +D +DLL++L ++I L +T IG VN+LRK S +D
Sbjct: 4 EEEVFRIQKKMSKMASDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDD 63
Query: 177 -VRKLVKHLVRKWKDIV 192
V L K L++ WK +
Sbjct: 64 EVIALAKTLIKNWKRFL 80
>gi|301111450|ref|XP_002904804.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
gi|262095134|gb|EEY53186.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
Length = 307
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+++L+ L +T+ LKET +G V +LRKH + + L + LV+ WK++
Sbjct: 26 LEVLRGLEKTTVTYAILKETKMGHTVGKLRKHENEKIASLARLLVKSWKNMA 77
>gi|241627295|ref|XP_002409821.1| alginate regulatory protein AlgR3, putative [Ixodes scapularis]
gi|215503240|gb|EEC12734.1| alginate regulatory protein AlgR3, putative [Ixodes scapularis]
Length = 449
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKL 198
A+I+++ L IT AL+ T +GR++N+LRK +SN+ L R+ KD+V W +L
Sbjct: 3 AVIEVIGMLERTPITKDALERTRLGRYINELRKKTSNE------QLARRAKDLVKSWRRL 56
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
++E RI + + +D +DLL++L ++I L +T IG VN+LRK S +D
Sbjct: 4 EEEVFRIQKKMSKMASDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDD 63
Query: 177 -VRKLVKHLVRKWKDIV 192
V L K L++ WK +
Sbjct: 64 EVIALAKTLIKNWKRFL 80
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 24/178 (13%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI E + SE AL LL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIARKLEKMVARKNSEGAL-GLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPN 235
+V L K L++ WK ++D PG + D +++ + ++ P+ SP
Sbjct: 63 EVVSLAKVLIKNWKRLLD------SPGPPKGEKGEERDKAKKEKGLDCSNWKPETGLSP- 115
Query: 236 PHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRES 293
P +K + P R++++ S+ ++SP P S++R K E+
Sbjct: 116 --------------PRKKRAEEPKERRDSVDSKSSATSSPKRP-SMERSNSGKSKAET 158
>gi|13385072|ref|NP_079893.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Mus musculus]
gi|147742987|sp|Q8R2M0.2|TEAN2_MOUSE RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|12843080|dbj|BAB25851.1| unnamed protein product [Mus musculus]
gi|148698840|gb|EDL30787.1| RIKEN cDNA 2210012G02, isoform CRA_a [Mus musculus]
Length = 207
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L+ LQ L + + L+ T IG VN++R+HS +V L K +
Sbjct: 45 KTMLELPDQTKENLVAALQELKKKMPSREVLRSTRIGHAVNKMRRHSDPEVAGLAKEVYT 104
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 105 EWKTFIEK 112
>gi|195502847|ref|XP_002098404.1| GE10362 [Drosophila yakuba]
gi|194184505|gb|EDW98116.1| GE10362 [Drosophila yakuba]
Length = 645
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I++H ED E L+ + L ++ I F+ L+ET IG+ VN LRK S +V K LV
Sbjct: 18 IEKHGED----EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRK-ISGEVGVAAKTLV 72
Query: 186 RKWKDIVDE 194
KWK +V E
Sbjct: 73 TKWKAMVAE 81
>gi|194910508|ref|XP_001982163.1| GG11195 [Drosophila erecta]
gi|190656801|gb|EDV54033.1| GG11195 [Drosophila erecta]
Length = 644
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I++H ED E L+ + L ++ I F+ L+ET IG+ VN LRK S +V K LV
Sbjct: 18 IEKHGED----EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRK-ISGEVGVAAKTLV 72
Query: 186 RKWKDIVDE 194
KWK +V E
Sbjct: 73 TKWKAMVAE 81
>gi|159487166|ref|XP_001701606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271547|gb|EDO97364.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1074
Score = 45.8 bits (107), Expect = 0.029, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV-- 196
ALI ++ L + + +ALK + IG+ V +LRKH+ VRK LV WK +VD V
Sbjct: 152 ALITVIGCLKMLPVDLQALKASSIGQTVGKLRKHTDGGVRKAAAELVDLWKGVVDRSVGR 211
Query: 197 --KLNQPGELASSAMMDGDSPQQK 218
+ Q G+ + + D P ++
Sbjct: 212 AGETRQGGKSSRADAASQDGPNKR 235
>gi|357143934|ref|XP_003573106.1| PREDICTED: uncharacterized protein LOC100824814 [Brachypodium
distachyon]
Length = 1687
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMD 211
I+ AL+ IG+ VN LR H + +++K K LV WK VD +K + ++
Sbjct: 452 ISLTALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDAEMKSTD-----AKPVLS 506
Query: 212 GDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRP 269
G + I +G P+ + + NG SGS SEP ++ + L +ALS++P
Sbjct: 507 GPA----ISWSGKAVFPEISSA---GNGRSGS----SEPSPRNPLSQLSSPKALSAKP 553
>gi|20271478|gb|AAH28321.1| RIKEN cDNA 2210012G02 gene [Mus musculus]
Length = 207
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L+ LQ L + + L+ T IG VN++R+HS +V L K +
Sbjct: 45 KTTLELPDQTKENLVAALQELKKKMPSREVLRSTRIGHAVNKMRRHSDPEVAGLAKEVYT 104
Query: 187 KWKDIVDE 194
+WK +++
Sbjct: 105 EWKTFIEK 112
>gi|224014700|ref|XP_002297012.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968392|gb|EED86740.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2210
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
K ++ E L+ + +++ D+L L D+ ++ LK+T IGR V QL+K+ V L
Sbjct: 1782 KNTCQLMEGLQQDTATTESIRDILHRLLDISMSRDILKDTMIGRVVVQLKKNEDRVVAAL 1841
Query: 181 VKHLVRKWK 189
K LV++WK
Sbjct: 1842 AKKLVKEWK 1850
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 120 QKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND- 176
++ +L I + L+ +S D +D+L++L + I L++T IG VN +RK ++ND
Sbjct: 6 EEEVLYIAKKLDKMVSKKSADNALDVLKALKQIPINLDTLQKTRIGMSVNNIRKQTANDE 65
Query: 177 VRKLVKHLVRKWKDIVDE 194
V K L++ WK +V E
Sbjct: 66 VAIAAKQLIKGWKKLVSE 83
>gi|148237978|ref|NP_001083898.1| mediator of RNA polymerase II transcription subunit 26 [Xenopus
laevis]
gi|82177417|sp|Q90YY5.1|MED26_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 7; Short=CRSP complex
subunit 7; AltName: Full=Mediator complex subunit 26
gi|15077843|gb|AAK83376.1|AF395742_1 CRSP70-like protein [Xenopus laevis]
gi|50417434|gb|AAH77251.1| Crsp7 protein [Xenopus laevis]
Length = 597
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK +SN D+ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTSNEDLAKRAKKLLRNWQKLIE 85
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIV 192
+DLL+ L M +T L+ T +G VN LRK SS+ +V L K L++ WK ++
Sbjct: 4 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 56
>gi|405953037|gb|EKC20771.1| Uncharacterized protein C1orf83 [Crassostrea gigas]
Length = 617
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 103 ENDNDIIDPYGGLFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDI 162
+N ND D G + ++ KR I L++P+ + + +I+ L L + K L ET I
Sbjct: 431 QNTND--DSAGVVVVEDIKRAKAI---LKEPNTTVEQMIECLSGLEKKIPSRKVLLETKI 485
Query: 163 GRHVNQLRKHSSNDVRKLVKHLVRKWK 189
G +N+LRKH ++++RK + + KWK
Sbjct: 486 GNVINKLRKHENDEIRKHARQVYVKWK 512
>gi|328783010|ref|XP_003250225.1| PREDICTED: transcription elongation factor B polypeptide 3 isoform
1 [Apis mellifera]
Length = 741
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I + ++E D +ED +I + L+++ +T + L++T +GR VN LRK+ V
Sbjct: 6 KIKHYQRNIEKCDDNEDRVIYCISKLSNLPVTVQHLQDTGVGRTVNGLRKYDGG-VGNAA 64
Query: 182 KHLVRKWKDIV 192
K LV KWK +V
Sbjct: 65 KALVAKWKAMV 75
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EI+ + + +++ D ++ LL L D + T K L+ET +G VN+ R H S ++ LV
Sbjct: 5 EIRSTVSNLEKAIDDTTILKLLNILNDGVKPTEKLLRETKVGVAVNKFRSHDSAEINGLV 64
Query: 182 KHLVRKWKDIVDEWVKLNQPGELASSA 208
K ++R W+D V + N +LA++A
Sbjct: 65 KKMIRNWRDAVQ--AEKNNKKKLATAA 89
>gi|218196410|gb|EEC78837.1| hypothetical protein OsI_19144 [Oryza sativa Indica Group]
Length = 315
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 45/235 (19%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKW-----KDI 191
++ + + L +L + +T + L TD+ V LRKH S +R L +VR+W +D+
Sbjct: 67 DEVMAESLLTLRLVPVTPRTLATTDLAGVVGALRKHDSERIRGLATDIVRRWRAAVKRDL 126
Query: 192 VDEWV---KLNQPGELASSA---------MMDGDSPQQKIPQ---NGNHQVPDFAYSPNP 236
V V KL+Q E +A G+ + Q +G H + + A NP
Sbjct: 127 VRIGVAMEKLSQTPERIEAADRPVSSDLDAKHGEGLRAIAAQEECSGRHGLGNKAEGANP 186
Query: 237 H--------------NGSSGSDK-NNSEPERKSKQAPLPRKE---ALSSRPPQSAS---- 274
N S G +K + +RK +A RK A +++P S S
Sbjct: 187 SAEEEAAGRRDGVKPNHSDGGEKLMTAATKRKLDEAQKRRKTADMAAAAKPEGSNSLPLL 246
Query: 275 -PAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
AP +V ++ES E D + ++A+A+++L+E Y+ E AK++R I V++
Sbjct: 247 KMVAP-AVVASHGRRESIELHND-EEKIAAAKRKLREGYQDAEEAKKRRKIHVIE 299
>gi|195579328|ref|XP_002079514.1| GD21971 [Drosophila simulans]
gi|194191523|gb|EDX05099.1| GD21971 [Drosophila simulans]
Length = 147
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+DE RI + + +D +DLL++L ++I L +T IG VN+LRK S +
Sbjct: 3 VEDEVFRIQKKMSKMASDGTGQDQALDLLKTLQTLNINLDILTKTRIGMTVNELRKSSKD 62
Query: 176 D-VRKLVKHLVRKWK 189
D V L K L++ WK
Sbjct: 63 DEVIALAKTLIKNWK 77
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIAKKLEKMVARKKTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 123 ILEIKEHL-----EDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND- 176
+L I++ L ED E AL DLL+ L ++I + L +T IG VN LRK S +D
Sbjct: 7 VLRIQKKLNKMTSEDGSGQEQAL-DLLKQLQTLNINLEVLTKTRIGMTVNALRKSSKDDE 65
Query: 177 VRKLVKHLVRKWKDIV 192
V L K L++ WK +
Sbjct: 66 VISLSKTLIKNWKKFL 81
>gi|431891277|gb|ELK02154.1| Transcription elongation factor A protein 3 [Pteropus alecto]
Length = 264
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L I + LE ++ + +DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 QEEELLRIAKKLEKMVARKNTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|328783008|ref|XP_396851.4| PREDICTED: transcription elongation factor B polypeptide 3 isoform
2 [Apis mellifera]
Length = 777
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I + ++E D +ED +I + L+++ +T + L++T +GR VN LRK+ V
Sbjct: 6 KIKHYQRNIEKCDDNEDRVIYCISKLSNLPVTVQHLQDTGVGRTVNGLRKYDGG-VGNAA 64
Query: 182 KHLVRKWKDIV 192
K LV KWK +V
Sbjct: 65 KALVAKWKAMV 75
>gi|356507216|ref|XP_003522365.1| PREDICTED: uncharacterized protein LOC100780436 [Glycine max]
Length = 1701
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 132 DPDQS-EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKD 190
D D+S E+ L+ LL++L + + +AL+ +IG+ VN LR H + ++++ + LV WK
Sbjct: 437 DGDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNTEIQRKARGLVDTWKK 496
Query: 191 IVD 193
V+
Sbjct: 497 RVE 499
>gi|312077149|ref|XP_003141176.1| hypothetical protein LOAG_05591 [Loa loa]
Length = 415
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 144 LQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE 203
L+ LA++++T + L ET +G+ VNQLR H + L +V KWKD+ L Q +
Sbjct: 5 LRRLANINMTLELLSETGVGKAVNQLRSHEQYGTKAL--RIVEKWKDMARS-CGLKQRRK 61
Query: 204 LASSAMMDGDSPQQKIPQNGNHQ 226
S + +SPQ+K ++ Q
Sbjct: 62 QFHSPSSERESPQKKSTKSNREQ 84
>gi|356518993|ref|XP_003528159.1| PREDICTED: uncharacterized protein LOC100788512 [Glycine max]
Length = 1613
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 132 DPDQS-EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKD 190
D D+S E+ L+ LL++L + + +AL+ +IG+ VN LR H + ++++ + LV WK
Sbjct: 353 DGDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNTEIQRKARGLVDTWKK 412
Query: 191 IVD 193
V+
Sbjct: 413 RVE 415
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
Q E AL DLL+ L ++ + L+ T IG VN++RKH S+ +V L K L++ WK ++D
Sbjct: 31 QQEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNRVRKHCSDKEVVSLAKVLIKNWKRLLD 89
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EIK + + ++S D ++ LL L+D + T K L+ET +G VN+ R +++++ +V
Sbjct: 5 EIKSIVSNLEKSSDDVMILKLLNILSDGVKPTEKLLRETKVGVAVNKYRSSTNSEISSIV 64
Query: 182 KHLVRKWKDIV 192
K ++R W+D+V
Sbjct: 65 KKMIRNWRDMV 75
>gi|357119773|ref|XP_003561608.1| PREDICTED: uncharacterized protein LOC100843839 [Brachypodium
distachyon]
Length = 523
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 35/193 (18%)
Query: 3 LDDFRSILKTAGVDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCDFG 62
L+ +R ++ ++ ID AI VA+ D L+ RRD I +RLY
Sbjct: 8 LEYWRVFFNSSRASIFDAIDAAIRVAAADNPDGLRARRDAIAQRLYTV------------ 55
Query: 63 NGVVDVNKEISRGQHDEVKAAQQASPSTPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKR 122
+ R + V AA + P P + + P+ D
Sbjct: 56 ---------LPRATEEAVLAADISPPLLP-------------EGPAVAPHRDSDDPVVAE 93
Query: 123 ILEIKEHLE-DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+ +K L + +SED L+DLL+ L + T +K TDI + V LR H S +R+L
Sbjct: 94 AIRVKVALSRNKQKSEDELLDLLRRLQLLKFTVDTIKVTDIVKAVQPLRNHVSKKIRELA 153
Query: 182 KHLVRKWKDIVDE 194
+ L+ W+ V+E
Sbjct: 154 RSLIEGWQAEVNE 166
>gi|195036976|ref|XP_001989944.1| GH18516 [Drosophila grimshawi]
gi|193894140|gb|EDV93006.1| GH18516 [Drosophila grimshawi]
Length = 692
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I+ H ED E L+ + L ++ ITF+ L+ET IG+ VN LRK + +V K LV
Sbjct: 18 IERHGED----ETRLLHCITKLFNLPITFEHLQETGIGKTVNALRK-INGEVGVAAKTLV 72
Query: 186 RKWKDIV 192
KWK +V
Sbjct: 73 TKWKAMV 79
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
E+K + + ++++D ++ LL L D + T K L+ET +G VN+ R HS+ V LV
Sbjct: 5 EVKSTVSNLEKTKDDATILKLLNILNDEVQPTEKLLRETKVGIAVNKYRTHSNAQVSLLV 64
Query: 182 KHLVRKWKDIV 192
K ++R W+D V
Sbjct: 65 KKMIRGWRDAV 75
>gi|393909808|gb|EFO22896.2| hypothetical protein LOAG_05591 [Loa loa]
Length = 502
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 125 EIKEHLEDPDQ---SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EI+E +E + ++ + L+ LA++++T + L ET +G+ VNQLR H + L
Sbjct: 70 EIREKVEKYTKMLSCDNKIGHALRRLANINMTLELLSETGVGKAVNQLRSHEQYGTKAL- 128
Query: 182 KHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQ 226
+V KWKD+ L Q + S + +SPQ+K ++ Q
Sbjct: 129 -RIVEKWKDMARS-CGLKQRRKQFHSPSSERESPQKKSTKSNREQ 171
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND--VRKLVKHLVRKWKDIV 192
+DLL++L ++ IT + L+ T IG VN LRK SSND V L K L++ WK ++
Sbjct: 34 LDLLKNLQELPITLEILQRTRIGMTVNSLRK-SSNDEEVITLAKVLIKSWKKLL 86
>gi|395840631|ref|XP_003793157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Otolemur garnettii]
Length = 208
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
LE P Q+++ L++ LQ L + + LK T IG VN++RKH ++V L K + +WK
Sbjct: 49 LELPVQTKENLVEALQELKKKIPSREVLKSTRIGHTVNKMRKHPDSEVACLAKEVYTEWK 108
Query: 190 DIVDEWV 196
+++ V
Sbjct: 109 TFIEKHV 115
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 131 EDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-NDVRKLVKHLVRKWK 189
ED +E AL DLL+SL +M +T L+++ +G VN LRK S ++V + K L+++WK
Sbjct: 20 EDNPNTEKAL-DLLKSLQEMPMTLDLLQKSHVGLSVNTLRKKCSDSEVSGVGKKLIKQWK 78
Query: 190 DIV 192
++
Sbjct: 79 KLL 81
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG V+ +RKH S+
Sbjct: 3 LEEELLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVSGVRKHCSD 61
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 62 KEVVSLAKVLIKNWKRLLD 80
>gi|261188838|ref|XP_002620832.1| DNA damage response protein RcaA [Ajellomyces dermatitidis
SLH14081]
gi|239591974|gb|EEQ74555.1| DNA damage response protein RcaA [Ajellomyces dermatitidis
SLH14081]
Length = 518
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 16/131 (12%)
Query: 123 ILEIKEH-----LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDV 177
+L IK H P +++D L ++L L +DI D HV Q R++++ +
Sbjct: 109 VLRIKWHPVVLTFSFPSKAKDPLKEVLCRLEGLDIKTIIPYVVDKTTHVVQTRRNTAKGL 168
Query: 178 RKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-----DGDS----PQQKIPQNGNH--Q 226
+ L+ K ++ V PG+L S + D D+ P Q +P G Q
Sbjct: 169 QALINGRYIVQKSYIEAIVYATTPGDLGSEEAICPLEEDFDAAWPDPTQYLPPKGREPTQ 228
Query: 227 VPDFAYSPNPH 237
PD AY PNP+
Sbjct: 229 RPDAAYEPNPN 239
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
+DLL++L ++I + L +T IG VN+LRK S +D V L K L++ WK +
Sbjct: 30 LDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNWKRFL 82
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L I + LE ++ + +DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 QEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
+D+L+ L + IT + L++T IG VN LRK S +D V L K LV+ WK ++
Sbjct: 29 LDMLKQLQRLPITLEILQKTHIGLTVNTLRKSSQDDEVILLAKTLVKNWKKLI 81
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L I + LE ++ + +DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 QEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|297797271|ref|XP_002866520.1| hypothetical protein ARALYDRAFT_919569 [Arabidopsis lyrata subsp.
lyrata]
gi|297312355|gb|EFH42779.1| hypothetical protein ARALYDRAFT_919569 [Arabidopsis lyrata subsp.
lyrata]
Length = 1597
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
+D L+ LL++L + + AL+ +IG+ VN LR H ++++ K + LV WK V+
Sbjct: 358 DDFLLILLRALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVE 414
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 123 ILEIKEHLE----DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS-SNDV 177
+L + LE D + + ++ DLL L + IT L++T IG VN LRK S DV
Sbjct: 7 VLNLSRQLEKLVADGNSNNESASDLLNQLKKLPITLDILQKTRIGMTVNVLRKASDREDV 66
Query: 178 RKLVKHLVRKWKDIVD 193
+ + K L++ WK ++D
Sbjct: 67 QIIAKSLIKSWKKLLD 82
>gi|47087443|ref|NP_998620.1| transcription elongation factor B polypeptide 3 [Danio rerio]
gi|27881892|gb|AAH44429.1| Zgc:55573 [Danio rerio]
Length = 622
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 123 ILEIKEHLE---DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
ILE E L+ +Q L+ L+ L ++ +T L ET IG+ VN LRKH +
Sbjct: 5 ILEAVEKLQLRLGDNQEPRKLLKTLKRLGELPMTVDILVETGIGKTVNSLRKHEYAG--E 62
Query: 180 LVKHLVRKWKDIVDE 194
K+LV KWK +V E
Sbjct: 63 AAKNLVAKWKKLVPE 77
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+ +DLL+ L ++ + L+ T IG VN +RKH S+ +V L K L++ WK ++D
Sbjct: 229 EGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 285
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + +E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|341879127|gb|EGT35062.1| hypothetical protein CAEBREN_12817 [Caenorhabditis brenneri]
Length = 309
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 34/167 (20%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
+ Q +++ + ++ +S + I LL LA + ++ + +++T+IG VN +RK S+
Sbjct: 4 LEQTQALCVQVDDICQNGMESAEDCIKLLDELAKIPMSVEIIQKTNIGIKVNTMRKKVSD 63
Query: 176 D-VRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSP 234
+ + K K+++++WK+IVD G + D +P
Sbjct: 64 EAIAKRAKNIIKEWKNIVD-----------------------------GKGKSQDDGDAP 94
Query: 235 NPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRP---PQSASPAAP 278
P +PE+K +AP R E S+RP Q AS A P
Sbjct: 95 PPAKKQRKESVEAPKPEKKKLEAPFKRPEP-SNRPEIVAQFASAAFP 140
>gi|327357691|gb|EGE86548.1| DNA damage response protein RcaA [Ajellomyces dermatitidis ATCC
18188]
Length = 683
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 16/131 (12%)
Query: 123 ILEIKEH-----LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDV 177
+L IK H P +++D L ++L L +DI D HV Q R++++ +
Sbjct: 109 VLRIKWHPVVLTFSFPSKAKDPLKEVLCRLEGLDIKTIIPYVVDKTTHVVQTRRNTAKGL 168
Query: 178 RKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-----DGDS----PQQKIPQNGNH--Q 226
+ L+ K ++ V PG+L S + D D+ P Q +P G Q
Sbjct: 169 QALINGRYIVQKSYIEAIVYATTPGDLGSEEAICPLEEDFDAAWPDPTQYLPPKGREPTQ 228
Query: 227 VPDFAYSPNPH 237
PD AY PNP+
Sbjct: 229 RPDAAYEPNPN 239
>gi|428304503|ref|YP_007141328.1| hypothetical protein Cri9333_0903 [Crinalium epipsammum PCC 9333]
gi|428246038|gb|AFZ11818.1| hypothetical protein Cri9333_0903 [Crinalium epipsammum PCC 9333]
Length = 274
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 255 KQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKR 314
K APLP++ L SR + A + V P + ES + T+ AD+ L + EN
Sbjct: 193 KDAPLPQQYLLLSRFVITCCAADAYPVGLPVKLTESTQ-TYPADTWLQIEGQMTTENL-- 249
Query: 315 EENAKRQRTIQVMDIHEIPKPKNAF 339
N KRQ TI I +IP+PKN +
Sbjct: 250 --NGKRQLTIAANSIKQIPQPKNPY 272
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + +E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
E +D L+ L + + +K L T +G+H+ L KH ++R L+ WKD++ +
Sbjct: 33 ETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKHPRENIRTFAVDLIAIWKDVIIKET 92
Query: 197 KLNQPG 202
N+ G
Sbjct: 93 SKNKNG 98
>gi|239615337|gb|EEQ92324.1| DNA damage response protein RcaA [Ajellomyces dermatitidis ER-3]
Length = 657
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 16/131 (12%)
Query: 123 ILEIKEH-----LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDV 177
+L IK H P +++D L ++L L +DI D HV Q R++++ +
Sbjct: 83 VLRIKWHPVVLTFSFPSKAKDPLKEVLCRLEGLDIKTIIPYVVDKTTHVVQTRRNTAKGL 142
Query: 178 RKLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-----DGDS----PQQKIPQNGNH--Q 226
+ L+ K ++ V PG+L S + D D+ P Q +P G Q
Sbjct: 143 QALINGRYIVQKSYIEAIVYATTPGDLGSEEAICPLEEDFDAAWPDPTQYLPPKGREPTQ 202
Query: 227 VPDFAYSPNPH 237
PD AY PNP+
Sbjct: 203 RPDAAYEPNPN 213
>gi|363742332|ref|XP_003642622.1| PREDICTED: transcription elongation factor A protein 3-like [Gallus
gallus]
Length = 398
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+SL +T + L+ T IG VN +RKH S+ +V K L++ WK +++
Sbjct: 21 KSTEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLE 80
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
E+ +D L+ L D +T++ L T +G+ + L KH + ++ L L+ WK+IV E
Sbjct: 29 EERCLDALKQLKDFPVTYQVLVSTQVGKRLRTLTKHPTKKIQALASDLIDIWKNIVIE 86
>gi|332807989|ref|XP_513192.3| PREDICTED: transcription elongation factor A protein 3, partial
[Pan troglodytes]
Length = 295
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + +E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+SL +T + L+ T IG VN +RKH S+ +V K L++ WK +++
Sbjct: 21 KSTEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLE 80
>gi|432095610|gb|ELK26748.1| Transcription elongation factor A N-terminal and central
domain-containing protein 2 [Myotis davidii]
Length = 208
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE P+Q+++ L++ L+ L + + LK T IG VN++R+HS ++V L K +
Sbjct: 46 KTMLELPNQTKENLVETLRELKKKIPSKEVLKSTRIGHTVNKMRQHSDSEVACLAKEVYT 105
Query: 187 KWKDIVDE 194
+W+ +++
Sbjct: 106 EWRTFIEK 113
>gi|402584050|gb|EJW77992.1| hypothetical protein WUBG_11100 [Wuchereria bancrofti]
Length = 261
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 125 EIKEHLEDPDQ---SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EI+E +E + ++ + L+ LA++++T + L ET +G+ VNQLR H + + L
Sbjct: 8 EIREKVEKYTRMLSCDNKIGHALRRLANINMTLELLSETGVGKAVNQLRSHEQHGTKAL- 66
Query: 182 KHLVRKWKDI 191
+V KWKD+
Sbjct: 67 -QIVEKWKDM 75
>gi|108999103|ref|XP_001112160.1| PREDICTED: transcription elongation factor A protein 3 [Macaca
mulatta]
Length = 248
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L I + LE ++ + +DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 3 QEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|170586772|ref|XP_001898153.1| RNA polymerase II:SUBUNIT=110kD. [Brugia malayi]
gi|158594548|gb|EDP33132.1| RNA polymerase II:SUBUNIT=110kD., putative [Brugia malayi]
Length = 421
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 144 LQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE 203
L+ LA++++T + L ET +G+ VNQLR H + L +V KWKDI L Q +
Sbjct: 11 LRRLANINMTLELLSETGVGKAVNQLRSHEQYGTKAL--QIVEKWKDIARS-CGLKQRKK 67
Query: 204 LASSAMMDGDSP 215
S +G++P
Sbjct: 68 RFLSPCSEGENP 79
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+A +DLL+ L ++ + L+ T IG VN +RKH S+ +V L K L++ WK ++D
Sbjct: 1 EAALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 57
>gi|410923941|ref|XP_003975440.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Takifugu rubripes]
Length = 209
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
I+ K LE P QS+D L+ L L+ + + LK T IG VN++RKH +V +
Sbjct: 43 IMRYKSMLELPQQSKDNLLSALTDLSKKIPSREVLKSTKIGHVVNKMRKHLDPEVSSMAA 102
Query: 183 HLVRKWKDIVDE 194
+ +W+ ++E
Sbjct: 103 KVYTEWRTFIEE 114
>gi|402853390|ref|XP_003891378.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 280
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + +E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIV 192
+D +DLL++L + I + L +T IG VN+LRK S + +V L K L++ WK +
Sbjct: 26 QDQALDLLKTLQTLSINLEILTKTRIGMTVNELRKSSKDEEVIALAKTLIKNWKRFL 82
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 136 SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVD 193
S+D I LL LA +T + +++T IG VN +RK ++ + K K+++++WK+IVD
Sbjct: 24 SKDECIKLLDDLAKFQMTVEIIQQTSIGIKVNMMRKKVPDESLAKRTKNIIKEWKNIVD 82
>gi|395521661|ref|XP_003764934.1| PREDICTED: transcription elongation factor B polypeptide 3
[Sarcophilus harrisii]
Length = 764
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+D+ IT L ET +G+ VN LRKH V K LV +WK +V
Sbjct: 5 LLKHLKRLSDLPITVDILAETGVGKTVNGLRKH--EQVGGFAKDLVARWKKLV 55
>gi|195391308|ref|XP_002054302.1| GJ24371 [Drosophila virilis]
gi|194152388|gb|EDW67822.1| GJ24371 [Drosophila virilis]
Length = 677
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I+ H ED E L+ + L ++ ITF+ L+ET IG+ VN LRK + +V K LV
Sbjct: 18 IERHGED----ETRLLHCITKLFNLPITFEHLQETGIGKTVNALRK-INGEVGVAAKTLV 72
Query: 186 RKWKDIV 192
KWK +V
Sbjct: 73 TKWKAMV 79
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 119 EQKRILEIKEHLEDPDQSEDAL--IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
E++ I+ I + ++ Q ++ +DLL+ L ++ ++ + L+ T IG VN +RK S++
Sbjct: 5 EEEEIIRIAKKMDKMAQKKNGAGALDLLKELRNIPMSLELLQSTRIGMSVNAIRKQSTDE 64
Query: 176 DVRKLVKHLVRKWKDIV 192
+V L K L++ WK ++
Sbjct: 65 EVTSLAKSLIKSWKKLL 81
>gi|380792457|gb|AFE68104.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 168
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + +E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + + + +E AL DLL+ L+D ++ + L+ T IG VN +RKH +
Sbjct: 4 EEELLRIAKKLDKMVSRKNTEGAL-DLLKKLSDYKMSIQLLQTTRIGIAVNGVRKHCLDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVALAKILIKNWKRLLD 80
>gi|356573400|ref|XP_003554849.1| PREDICTED: uncharacterized protein LOC100796021, partial [Glycine
max]
Length = 1564
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
L+ LL++L + + AL+ ++G+ VN LR H + ++++ + LV WK V+ + +N
Sbjct: 353 LLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNYEIQRKARSLVDTWKRRVEAEMNMN 412
Query: 200 QPGELASSAM-MDGDSPQQKIPQNGNHQV 227
++ M S + PQ GN +
Sbjct: 413 DSKSGSNRTMSWPAKSANSESPQVGNRKT 441
>gi|444318181|ref|XP_004179748.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
gi|387512789|emb|CCH60229.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
Length = 308
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDV 177
E K + + ++LE ++ ++++L++L D+ T K L+ET +G VN+ +K S+ ++
Sbjct: 2 ESKEVSVLVKNLEKNKTNDKVVLEILKTLEKDVVATEKLLRETKVGVEVNKFKKSSNQEI 61
Query: 178 RKLVKHLVRKWKDIVD 193
+VK ++ WKD ++
Sbjct: 62 ASMVKKIIGSWKDSIN 77
>gi|291411771|ref|XP_002722140.1| PREDICTED: mediator complex subunit 26 [Oryctolagus cuniculus]
Length = 599
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK ++N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTTNEELAKRAKKLLRSWQKLIE 85
>gi|24649262|ref|NP_732846.1| elongin A, isoform A [Drosophila melanogaster]
gi|51316116|sp|Q9VCP0.1|ELOA1_DROME RecName: Full=Transcription elongation factor B polypeptide 3;
AltName: Full=Elongin-A; AltName: Full=RNA polymerase II
transcription factor SIII subunit A; AltName: Full=dEloA
gi|7300979|gb|AAF56117.1| elongin A, isoform A [Drosophila melanogaster]
gi|375065914|gb|AFA28438.1| FI18652p1 [Drosophila melanogaster]
Length = 643
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I++H ED E L+ + L ++ I F+ L+ET IG+ VN LRK S +V K LV
Sbjct: 18 IEKHGED----EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRK-ISGEVGVAAKTLV 72
Query: 186 RKWKDIV 192
KWK +V
Sbjct: 73 TKWKAMV 79
>gi|195573100|ref|XP_002104533.1| GD21008 [Drosophila simulans]
gi|194200460|gb|EDX14036.1| GD21008 [Drosophila simulans]
Length = 640
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I++H ED E L+ + L ++ I F+ L+ET IG+ VN LRK S +V K LV
Sbjct: 18 IEKHGED----EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRK-ISGEVGVAAKTLV 72
Query: 186 RKWKDIV 192
KWK +V
Sbjct: 73 TKWKAMV 79
>gi|147819619|emb|CAN67642.1| hypothetical protein VITISV_008187 [Vitis vinifera]
Length = 148
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 131 EDPDQS-EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
+D D+S E++L+ LL +L + + +AL+ +IG+ VN LR H + +++K ++L WK
Sbjct: 17 KDGDKSAEESLLVLLHALDKLPVNLQALQMCNIGKSVNHLRTHKNLEIQKKARNLXDTWK 76
Query: 190 DIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNG 239
V+ + +N A S + Q +P ++ + ++ N H+G
Sbjct: 77 KRVEAXMNIND----AKSGL------SQAVPWFSRPRLSEVSHDGNRHSG 116
>gi|255730739|ref|XP_002550294.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
gi|240132251|gb|EER31809.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
Length = 312
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EI+ + + +++ D ++ LL L D + T K L+ET +G VN+ R H + ++ LV
Sbjct: 5 EIRSTISNLEKAADDKTILKLLNILNDGVTPTEKLLRETKVGVTVNKYRSHDNTEINTLV 64
Query: 182 KHLVRKWKDIV 192
K ++R W+D V
Sbjct: 65 KKMIRNWRDAV 75
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 123 ILEIKEHLEDPDQSEDA--LIDLLQSLA-DMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+LE+K+ ++ + D +ID+L L D +IT L+E+ G V +LR H++ V
Sbjct: 5 VLELKKLVKQLQSAADEQEIIDVLNILKKDFEITESILRESKAGLAVGKLRTHAAKHVAD 64
Query: 180 LVKHLVRKWKDIVDE 194
L K +V+KWK V++
Sbjct: 65 LAKEIVKKWKVAVEK 79
>gi|388501372|gb|AFK38752.1| unknown [Medicago truncatula]
Length = 204
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
E +D L+ L + + +K L T +G+H+ L KH ++R L+ WKD++ +
Sbjct: 33 ETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKHPRENIRAFAVDLIAIWKDVIIKET 92
Query: 197 KLNQPG 202
N+ G
Sbjct: 93 SKNKNG 98
>gi|28380977|gb|AAO41456.1| RE20724p [Drosophila melanogaster]
Length = 643
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I++H ED E L+ + L ++ I F+ L+ET IG+ VN LRK S +V K LV
Sbjct: 18 IEKHGED----EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRK-ISGEVGVAAKTLV 72
Query: 186 RKWKDIV 192
KWK +V
Sbjct: 73 TKWKAMV 79
>gi|354466615|ref|XP_003495769.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Cricetulus griseus]
gi|344235630|gb|EGV91733.1| Uncharacterized protein C1orf83-like [Cricetulus griseus]
Length = 208
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE PDQ+++ L+ LQ L + + L+ T IG VN++RKHS +V L K +
Sbjct: 46 KTMLELPDQTKENLVTALQELKKKIPSKEVLRSTKIGHIVNKMRKHSDPEVACLAKEVHT 105
Query: 187 KWKDIVDE 194
+WK ++
Sbjct: 106 EWKTFFEK 113
>gi|255540753|ref|XP_002511441.1| DNA binding protein, putative [Ricinus communis]
gi|223550556|gb|EEF52043.1| DNA binding protein, putative [Ricinus communis]
Length = 1712
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 18/151 (11%)
Query: 131 EDPDQS-EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
+D D+S E+ L LL++L + + AL+ +IG+ VN LR H + +++K + LV WK
Sbjct: 438 KDGDKSIEEFLFVLLRALDKLPVNLHALQMCNIGKSVNHLRTHKNLEIQKKARSLVDTWK 497
Query: 190 DIVDEWVKLNQPGELASSAMMDGDS-PQQKIPQNGNHQVPDFAYSPNPHNGSSG--SDKN 246
V+ A MD S Q + ++P+ ++ N H +S + K+
Sbjct: 498 KRVE--------------AEMDAKSGSNQAVSWAARPRLPEVSHGGNRHLSASSEVAMKS 543
Query: 247 NSEPERKSKQAPLPRKEALSSRPPQSASPAA 277
++ SK P+ + ++ SASP +
Sbjct: 544 SAAQISASKNTPVKLVQGETATKSTSASPGS 574
>gi|260949205|ref|XP_002618899.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
gi|238846471|gb|EEQ35935.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
Length = 309
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 123 ILEIKEHLEDPDQSED--ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+ EIK + + ++S D ++ LL L D ++ + K L+ET +G +N+ R S++++
Sbjct: 24 VKEIKSTVSNLEKSSDDTTILRLLNILNDGVEPSEKLLRETKVGVAINKYRSSSNSEISA 83
Query: 180 LVKHLVRKWKDIV 192
LVK +++KWK+ V
Sbjct: 84 LVKKMIKKWKEAV 96
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+DLL+ L ++ + L+ T IG VN +RKH S+ +V + K L++ WK ++D
Sbjct: 27 LDLLKKLGSYQMSIRLLQTTKIGVAVNGVRKHCSDKEVVAMAKVLIKNWKQLLD 80
>gi|62859431|ref|NP_001016996.1| mediator complex subunit 26 [Xenopus (Silurana) tropicalis]
Length = 597
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK +SN ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTSNEELAKRAKKLLRNWQKLIE 85
>gi|47223072|emb|CAG07159.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
IL K LE P QS+D L+ L L+ + + LK T IG VN++RKH +V +
Sbjct: 41 ILRYKSILELPQQSKDNLLSALTELSKKIPSREVLKSTKIGHVVNKMRKHLDPEVSSVAA 100
Query: 183 HLVRKWKDIVDE 194
+ +W+ V+E
Sbjct: 101 KVYTEWRTFVEE 112
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 132 DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
D D + + ++D+LQ L I L ET IG V++L+ HS ++ + LV+KWK+I
Sbjct: 100 DGDGNSEKILDILQRLDKEKIDLAILTETLIGASVSKLKAHSDTNISISARGLVKKWKNI 159
Query: 192 VDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHN--GSSGSDKNNSE 249
+P + + S N + + D + SPN S+GS N E
Sbjct: 160 AK-----GKPADASKSTAS---------TNNTSSTITDVSPSPNKLKRLDSAGSSDINPE 205
Query: 250 PE 251
E
Sbjct: 206 TE 207
>gi|409041587|gb|EKM51072.1| hypothetical protein PHACADRAFT_263043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 303
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKAL-KETDIGRHVNQLRKHSSNDVRKLVKHL 184
+K+ +P +E ++ +LQ+L + I +AL +E+ G V +LR H+S V L K +
Sbjct: 11 VKQLQSNP--TEQDILGILQTLKEQQIVTEALLRESKAGLAVGKLRTHASRVVADLAKEI 68
Query: 185 VRKWKDIVDE 194
V+KWK V++
Sbjct: 69 VKKWKQAVEQ 78
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 140 LIDLLQSLADMDI-TFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
L+ LL+ L + T + L++T +G V +LR+H S +V L K +V++WK VDE
Sbjct: 25 LVGLLKKLKQSVVPTEETLRDTKVGLTVGRLRQHESTEVSDLAKEIVKRWKSEVDE 80
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 119 EQKRILE-IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDV 177
E KR+++ + E + P S+ + LLQ L +T LKET G V +LR H++ V
Sbjct: 7 EFKRLVKDVVESSKGPKHSDT--VGLLQKLRGHGVTEDLLKETKAGLAVGKLRSHANAQV 64
Query: 178 RKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSP---QQKIPQNGNHQVPDFAYSP 234
+ K +VR+WK V+ + G + S +P Q +P + + + P A +
Sbjct: 65 AETAKEVVRRWKAEVEGQKSEKKAGSSSPSGGAKKVNPKPIQTSVPGSTSSKSPAPA-TA 123
Query: 235 NPHN 238
PH
Sbjct: 124 GPHT 127
>gi|348556620|ref|XP_003464119.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Cavia porcellus]
Length = 208
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 102 IENDNDIIDPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMD 151
I+N DP G ++ + KR++ I K LE PDQ+++ L++ L+ L
Sbjct: 11 IQNTPQKKDPGGKIYKQATIESLKRVVVIEDIKRWKSMLELPDQTKENLVEALRELKKKI 70
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
+ + LK T IG V ++ KHS ++V L K + +WK +++
Sbjct: 71 PSREVLKSTRIGFTVKKMCKHSDSEVACLAKEVYTEWKTFIEK 113
>gi|195331265|ref|XP_002032323.1| GM26494 [Drosophila sechellia]
gi|194121266|gb|EDW43309.1| GM26494 [Drosophila sechellia]
Length = 643
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I++H ED E L+ + L ++ I F+ L+ET IG+ VN LRK S +V K LV
Sbjct: 18 IEKHGED----EQRLLHCITKLFNLPIKFEHLQETGIGKTVNALRK-ISGEVGVAAKTLV 72
Query: 186 RKWKDIV 192
KWK +V
Sbjct: 73 TKWKAMV 79
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 120 QKRILEIKEHLE----DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
++ +++I++ LE D D AL DLL+ L + I L T IG VN LRK S +
Sbjct: 4 EEEVVDIRKKLENILGDSDDGNQAL-DLLKVLGRLKINLDILTVTRIGMTVNNLRKKSKD 62
Query: 176 -DVRKLVKHLVRKWKDIVDE 194
+V + K L++ WK V E
Sbjct: 63 EEVVTVAKSLIKTWKKFVPE 82
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+S + +DLL+SL +T + L+ T IG VN +RKH S+ +V K L++ WK +++
Sbjct: 21 KSTEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLE 80
Query: 194 EWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERK 253
+ D D ++K +G+ + S P G S KN +E R+
Sbjct: 81 STTTKKEK---------DADRKKEK-DTDGDKEKKGLDVSSCPSEGVKHS-KNTAEKHRE 129
Query: 254 SKQAPLPRK 262
+ P K
Sbjct: 130 KHKERKPSK 138
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIAKKLEKMVARKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGIAVNGVRKHCSDT 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+ L K L++KWK +++
Sbjct: 63 EAVSLAKVLIKKWKRLLE 80
>gi|126324073|ref|XP_001363132.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Monodelphis domestica]
Length = 612
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVDEWVK 197
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ ++ E V
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLI-EPVT 88
Query: 198 LNQP 201
N+P
Sbjct: 89 QNEP 92
>gi|348556968|ref|XP_003464292.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Cavia porcellus]
Length = 583
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ VN +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLERYPITKEALEETRLGKLVNDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|427788075|gb|JAA59489.1| Putative transcription elongation factor b polypeptide
[Rhipicephalus pulchellus]
Length = 577
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 118 DEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDV 177
D +++IL + LE +QS++ +++ L+ L + +T L++T IGR VN L+K+ + +
Sbjct: 3 DCKEKILHYGKRLEK-NQSDEKVLETLRKLQKVPMTLNLLQDTGIGRTVNHLKKN-TGVI 60
Query: 178 RKLVKHLVRKWKDIV 192
+L + ++ WK +V
Sbjct: 61 GELARAIISSWKQVV 75
>gi|48476355|gb|AAT44402.1| rhabdomyosarcoma antigen MU-RMS-40.22 [Homo sapiens]
Length = 154
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 117 DDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
++E RI + E + +E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 4 EEELLRIAKKLEKMVARKNTEGAL-DLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVSLAKVLIKNWKRLLD 80
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+ +DLL+ L ++ + L+ T IG VN +RKH S+ +V L K L++ WK ++D
Sbjct: 168 EGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 224
>gi|410053425|ref|XP_003953452.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26 [Pan troglodytes]
Length = 868
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 306 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 361
>gi|395513669|ref|XP_003761045.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Sarcophilus harrisii]
Length = 585
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVDEWVK 197
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ ++ E V
Sbjct: 3 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLI-EPVT 61
Query: 198 LNQP 201
N+P
Sbjct: 62 QNEP 65
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 136 SEDALIDLLQSLA-DMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
SE + D+L L D IT L+E+ IG V +LR H++ D+ L K +V+KWK V++
Sbjct: 19 SEQEIKDVLAILKKDAKITEAWLRESKIGLAVGKLRSHANRDISNLAKEVVKKWKAEVEK 78
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
++ +DLL+ L ++ + L+ T IG VN +RKH S+ +V L K L++ WK ++D
Sbjct: 4 QEGALDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 61
>gi|348684269|gb|EGZ24084.1| hypothetical protein PHYSODRAFT_359182 [Phytophthora sojae]
Length = 2487
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 116 FDDEQKRILEIKEHLED-----PDQSEDALIDLLQSLADMDITFK----------ALKET 160
+ Q ++ I L++ +S+ ++ LL+ L MD+ L+ T
Sbjct: 1317 YKSTQSELITITSVLDELRADKSSESQAKIVKLLKRLDKMDVMLTDLRVRLLILAFLRST 1376
Query: 161 DIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQ 216
IG+ VN+LRKH D++ L L KW ++D+ L + S + + PQ
Sbjct: 1377 SIGKAVNKLRKHDDKDIKALSAKLKDKWTSLMDKKDTLERAPRFLSPELWEAIKPQ 1432
>gi|344282648|ref|XP_003413085.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Loxodonta africana]
Length = 596
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|397484892|ref|XP_003813599.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
isoform 1 [Pan paniscus]
Length = 738
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 168 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 223
>gi|325184296|emb|CCA18787.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 596
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
++ K L DP S + +++ L++L M +T + LK T I R V+ LR+H+++ V
Sbjct: 410 LVAAKGKLSDPKVSHEQILECLEALTSMPLTIQLLKRTGISRSVSSLRQHANDKVSASAS 469
Query: 183 HLVRKWKDIV 192
L +W ++
Sbjct: 470 ALRAQWMKLL 479
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
EI+ + + +++ D ++ LL L D + + K L+ET +G VN+ R H S ++ LV
Sbjct: 5 EIRSTVSNLEKAVDDTTILKLLNILNDGVKPSEKLLRETKVGVAVNKFRSHDSAEINGLV 64
Query: 182 KHLVRKWKDIV 192
K ++R W+D V
Sbjct: 65 KKMIRNWRDAV 75
>gi|258575459|ref|XP_002541911.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
gi|237902177|gb|EEP76578.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
Length = 303
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 139 ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
LI +L+ L + + T L+ T IG VN+L+ H DV +L +V KW+ V++
Sbjct: 25 TLISILKDLQNGVRPTEDLLRATKIGITVNRLKTHKHPDVARLASDIVHKWRHEVNKQKT 84
Query: 198 LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDK 245
P +++ DSP+ Q P+ A +P P G+ GSDK
Sbjct: 85 SGSP----TTSQRSSDSPK---------QTPNGAATPTP--GAEGSDK 117
>gi|448079285|ref|XP_004194362.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359375784|emb|CCE86366.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 123 ILEIKEHLEDPDQSED--ALIDLLQSLADMDITFKAL-KETDIGRHVNQLRKHSSNDVRK 179
+ EIK + D+S+D ++ LL L D + ++L +ET +G VN+ R S+ +++
Sbjct: 3 VKEIKSAVSSLDKSKDDVTVLKLLNILNDGVVPSESLLRETKVGVAVNKFRTSSNPEIQS 62
Query: 180 LVKHLVRKWKDIV 192
LVK ++RKW++ V
Sbjct: 63 LVKKMIRKWRESV 75
>gi|301608648|ref|XP_002933890.1| PREDICTED: transcription elongation factor B polypeptide 3 [Xenopus
(Silurana) tropicalis]
Length = 706
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L L+ L D+ IT L ET IG+ VN LRKH V L K+LV +WK +V
Sbjct: 25 LQKTLKRLGDLPITVDILVETGIGKTVNGLRKHEF--VGDLAKNLVAQWKKLV 75
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 18/119 (15%)
Query: 143 LLQSLADMDITFKA----LKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKL 198
LL+ L D+ A L++T IG +N+LR H V++L LV KW+D V + K
Sbjct: 28 LLKLLGDLKTGVHATEDLLRQTRIGVTINRLRTHKDPAVQRLATELVSKWRDEVKKGPKK 87
Query: 199 NQPGELASSAMMDGDSP---------QQK-----IPQNGNHQVPDFAYSPNPHNGSSGS 243
P ++A+ + P QQK P NH+ Y+ H G
Sbjct: 88 GTPSKIANGSASPAPPPSGTASPAPAQQKKKHDVAPDKRNHKTDKVNYNVTGHEARDGC 146
>gi|259146459|emb|CAY79716.1| Dst1p [Saccharomyces cerevisiae EC1118]
Length = 309
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
K +L ++LE ++ A++++L L + T K L+ET +G VN+ +K ++ ++ K
Sbjct: 4 KEVLVHVKNLEKNKSNDAAVLEILHVLDKEFVPTEKLLRETKVGVEVNKFKKSTNVEISK 63
Query: 180 LVKHLVRKWKDIVDE 194
LVK ++ WKD +++
Sbjct: 64 LVKKMISSWKDAINK 78
>gi|351712954|gb|EHB15873.1| Mediator of RNA polymerase II transcription subunit 26, partial
[Heterocephalus glaber]
Length = 513
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ VN +RK + N ++ K K L+R W+ +++
Sbjct: 6 AVLEVISSLERYPITKEALEETRLGKLVNDVRKKTKNEELAKRAKKLLRSWQKLIE 61
>gi|194742910|ref|XP_001953943.1| GF16986 [Drosophila ananassae]
gi|190626980|gb|EDV42504.1| GF16986 [Drosophila ananassae]
Length = 648
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I++H ED E L+ + L ++ I F+ L+ET IG+ VN LRK + +V K LV
Sbjct: 18 IEKHGED----EKRLLHCVTKLFNLPIKFEHLQETGIGKTVNSLRK-INGEVGVAAKTLV 72
Query: 186 RKWKDIV 192
KWK +V
Sbjct: 73 TKWKAMV 79
>gi|6321395|ref|NP_011472.1| Dst1p [Saccharomyces cerevisiae S288c]
gi|1729915|sp|P07273.4|TFS2_YEAST RecName: Full=Transcription elongation factor S-II; AltName:
Full=DNA strand transfer protein alpha; Short=STP-alpha;
AltName: Full=DNA strand transferase 1; AltName:
Full=Pyrimidine pathway regulatory protein 2
gi|34810565|pdb|1PQV|S Chain S, Rna Polymerase Ii-Tfiis Complex
gi|218517|dbj|BAA02046.1| transcriptional elongation factor S-II [Saccharomyces cerevisiae]
gi|1322528|emb|CAA96744.1| DST1 [Saccharomyces cerevisiae]
gi|151943248|gb|EDN61561.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190407007|gb|EDV10274.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
RM11-1a]
gi|256271330|gb|EEU06396.1| Dst1p [Saccharomyces cerevisiae JAY291]
gi|285812157|tpg|DAA08057.1| TPA: Dst1p [Saccharomyces cerevisiae S288c]
gi|323304905|gb|EGA58662.1| Dst1p [Saccharomyces cerevisiae FostersB]
gi|323309085|gb|EGA62313.1| Dst1p [Saccharomyces cerevisiae FostersO]
gi|323337623|gb|EGA78868.1| Dst1p [Saccharomyces cerevisiae Vin13]
gi|323348527|gb|EGA82771.1| Dst1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354949|gb|EGA86780.1| Dst1p [Saccharomyces cerevisiae VL3]
gi|349578179|dbj|GAA23345.1| K7_Dst1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765583|gb|EHN07090.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299216|gb|EIW10310.1| Dst1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 309
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
K +L ++LE ++ A++++L L + T K L+ET +G VN+ +K ++ ++ K
Sbjct: 4 KEVLVHVKNLEKNKSNDAAVLEILHVLDKEFVPTEKLLRETKVGVEVNKFKKSTNVEISK 63
Query: 180 LVKHLVRKWKDIVDE 194
LVK ++ WKD +++
Sbjct: 64 LVKKMISSWKDAINK 78
>gi|348542245|ref|XP_003458596.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Oreochromis niloticus]
Length = 663
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 123 ILEIKEHLED---PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+LE E L+ +Q L+ L+ L ++ +T L ET +G+ VN RKH +
Sbjct: 5 LLETVERLQSRLQENQEPRKLLKTLKRLGELPMTVDILVETGVGKAVNSFRKHELAG--E 62
Query: 180 LVKHLVRKWKDIV 192
+ K+LV KWK +V
Sbjct: 63 MAKNLVAKWKKLV 75
>gi|195109188|ref|XP_001999169.1| GI24361 [Drosophila mojavensis]
gi|193915763|gb|EDW14630.1| GI24361 [Drosophila mojavensis]
Length = 715
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ + L ++ ITF+ L+ET IG+ VN LRK + +V K LV KWK +V
Sbjct: 40 LLHCITKLFNLPITFEHLQETGIGKTVNALRK-INGEVGVAAKTLVTKWKAMV 91
>gi|255076087|ref|XP_002501718.1| predicted protein [Micromonas sp. RCC299]
gi|226516982|gb|ACO62976.1| predicted protein [Micromonas sp. RCC299]
Length = 139
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQL-RKHSSNDVRKLVKHLV 185
K LED D +++ + L+ L+ M +T L + IG+ V++L RKH +VRKL +V
Sbjct: 40 KATLEDADTTKEEFLTALRHLSSMLMTRDLLTSSMIGKVVSRLRRKHPDEEVRKLAGAMV 99
Query: 186 RKWK 189
KWK
Sbjct: 100 DKWK 103
>gi|303286731|ref|XP_003062655.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456172|gb|EEH53474.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 133
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQL-RKHSSNDVRKLV 181
++ +K+ +ED D S+D ++ L+ LA M ++ L ++ +G+ V ++ RKH +VR
Sbjct: 41 VMRLKKTIEDVDASKDDVVHALRQLASMMMSTDLLAKSLVGKSVKRISRKHGDGEVRAAA 100
Query: 182 KHLVRKW 188
K + KW
Sbjct: 101 KAIAEKW 107
>gi|195146240|ref|XP_002014095.1| GL24491 [Drosophila persimilis]
gi|194103038|gb|EDW25081.1| GL24491 [Drosophila persimilis]
Length = 699
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
I++H ED E L+ + L ++ I F+ L+ET IG+ VN LRK + +V + LV
Sbjct: 18 IEKHGED----EKRLMHCITKLFNLPIKFEHLQETGIGKTVNALRKF-NGEVGVAARTLV 72
Query: 186 RKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNG-----NHQVPDFAYSPNPHNGS 240
+WK +V +P E SA+ + NG + Q ++ S N S
Sbjct: 73 TRWKAMV---AAEEEPAEPTPSAIGTTSHEEDSGKSNGRRSSEDEQEQEYKGS----NSS 125
Query: 241 SGSDKNNSEPERKS 254
SG + +S +RKS
Sbjct: 126 SGGEDGHSSSKRKS 139
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+ +DLL+ L +T + L+ T IG VN +RKHS + +V L K L++ WK +++
Sbjct: 19 EGALDLLKRLNSCTMTIQLLQTTRIGIAVNTIRKHSRDEEVIALAKVLIKNWKRLLE 75
>gi|281207317|gb|EFA81500.1| RNA polymerase II elongation factor [Polysphondylium pallidum
PN500]
Length = 275
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 123 ILEIKEHLEDP--DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
I+E+K+ L++ D D ++ LL++++ +DI+ L++T IG+ V LRK+ + + K
Sbjct: 5 IVELKQQLDNAVKDDDLDTVLALLKAISLLDISKDLLQKTAIGKSVGLLRKNKNEAISKN 64
Query: 181 VKHLVRKWKD 190
LV KWK+
Sbjct: 65 ALELVDKWKE 74
>gi|431921958|gb|ELK19131.1| Mediator of RNA polymerase II transcription subunit 26 [Pteropus
alecto]
Length = 572
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 3 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 58
>gi|395848053|ref|XP_003796675.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Otolemur garnettii]
Length = 797
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 256 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 311
>gi|345794043|ref|XP_535361.3| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor B
polypeptide 3 [Canis lupus familiaris]
Length = 751
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+ L+ L+ L+ + IT L ET +G+ VN LRKH V + LV +WK +V
Sbjct: 6 NGLLKYLKKLSTLPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 58
>gi|365760728|gb|EHN02426.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 180
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 125 EIKEHLEDPDQSEDALIDLLQSLADMDITF----KALKETDIGRHVNQLRKHSSNDVRKL 180
E+ H+++ ++++ +LQ L D+D F K L+ET +G VN+ +K ++ ++ +L
Sbjct: 5 EVLVHVKNLEKNKSNDAAVLQILHDLDKEFVPTEKLLRETKVGVEVNKFKKSTNLEISRL 64
Query: 181 VKHLVRKWKDIVDE 194
VK ++ WKD +++
Sbjct: 65 VKKMISSWKDAINK 78
>gi|403303377|ref|XP_003942304.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Saimiri boliviensis boliviensis]
Length = 600
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 136 SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+E+ +DLL+ L ++ + L+ T IG VN +RKH + +V L K L++ WK ++D
Sbjct: 26 TEEGALDLLKKLNGYKMSIQLLQTTRIGIAVNGVRKHCLDKEVVALAKILIKNWKRLLD 84
>gi|189054009|dbj|BAG36516.1| unnamed protein product [Homo sapiens]
Length = 600
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|410910842|ref|XP_003968899.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Takifugu rubripes]
Length = 626
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
Q R+L+ EH + L+ + LA++ +T + L ET +G+ VN RKH V +
Sbjct: 13 QSRLLDNTEHRK--------LLKTFKRLAELPMTVEILVETGVGKTVNSFRKHEV--VGE 62
Query: 180 LVKHLVRKWKDIVDEWV 196
K LV +WK +V + V
Sbjct: 63 AAKSLVGQWKKLVPQSV 79
>gi|332253423|ref|XP_003275841.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26 [Nomascus leucogenys]
Length = 600
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|291221136|ref|XP_002730579.1| PREDICTED: chromosome 1 open reading frame 83-like [Saccoglossus
kowalevskii]
Length = 210
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
IL +K LE +Q+E+ L+ LQ L + + L T IG +N +RKHSS +V L K
Sbjct: 44 ILRMKAVLELENQTEENLLKALQELRQKTPSREILSSTKIGHTLNTIRKHSSKEVAALAK 103
Query: 183 HLVRKWKDIV 192
+ WK +
Sbjct: 104 DIRNDWKKFI 113
>gi|397484894|ref|XP_003813600.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
isoform 2 [Pan paniscus]
gi|397484896|ref|XP_003813601.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
isoform 3 [Pan paniscus]
Length = 573
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 3 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 58
>gi|296233202|ref|XP_002761911.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Callithrix jacchus]
Length = 600
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|326933172|ref|XP_003212682.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Meleagris gallopavo]
Length = 763
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+++ IT L ET +G+ VN LRKH V K+LV +WK +V
Sbjct: 9 LLKSLKRLSELPITVDILVETGVGKTVNSLRKHEL--VGDFAKNLVARWKKLV 59
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+ +DLL+ L ++ + L+ T IG VN +RKH S+ +V L K L++ WK ++D
Sbjct: 1 EGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 57
>gi|28558977|ref|NP_004822.2| mediator of RNA polymerase II transcription subunit 26 [Homo
sapiens]
gi|158931130|sp|O95402.2|MED26_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Activator-recruited cofactor 70 kDa
component; Short=ARC70; AltName: Full=Cofactor required
for Sp1 transcriptional activation subunit 7; Short=CRSP
complex subunit 7; AltName: Full=Mediator complex
subunit 26; AltName: Full=Transcriptional coactivator
CRSP70
gi|119604960|gb|EAW84554.1| cofactor required for Sp1 transcriptional activation, subunit 7,
70kDa [Homo sapiens]
gi|208966728|dbj|BAG73378.1| mediator complex subunit 26 [synthetic construct]
Length = 600
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|4220894|gb|AAD12722.1| transcriptional co-activator CRSP70 [Homo sapiens]
Length = 600
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|62079249|ref|NP_001014282.1| transcription elongation factor A N-terminal and central
domain-containing protein 2 [Rattus norvegicus]
gi|81883748|sp|Q5XIC7.1|TEAN2_RAT RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
gi|53734264|gb|AAH83757.1| Similar to RIKEN cDNA 2210012G02 [Rattus norvegicus]
gi|149035766|gb|EDL90447.1| similar to RIKEN cDNA 2210012G02, isoform CRA_b [Rattus norvegicus]
Length = 207
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
LE P+Q+++ L+ LQ L + + L+ T IG VN++R+HS +V L K + +WK
Sbjct: 48 LELPEQTKENLVAALQELKKKIPSREVLRSTRIGHAVNKVRRHSDPEVAGLAKEVYTEWK 107
Query: 190 DIVD 193
++
Sbjct: 108 TFIE 111
>gi|255540759|ref|XP_002511444.1| conserved hypothetical protein [Ricinus communis]
gi|223550559|gb|EEF52046.1| conserved hypothetical protein [Ricinus communis]
Length = 1651
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
E+ L+ LL++L + + AL+ +IG+ VN LR H +++K + LV WK V+
Sbjct: 365 EEFLLVLLRALDKLPVNLHALQMCNIGKSVNHLRTHKHLEIQKKARTLVDTWKKRVE 421
>gi|355755583|gb|EHH59330.1| Mediator complex subunit 26 [Macaca fascicularis]
Length = 582
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 12 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 67
>gi|344241406|gb|EGV97509.1| Mediator of RNA polymerase II transcription subunit 26 [Cricetulus
griseus]
Length = 558
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 3 AVLEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIE 58
>gi|410216636|gb|JAA05537.1| mediator complex subunit 26 [Pan troglodytes]
gi|410247824|gb|JAA11879.1| mediator complex subunit 26 [Pan troglodytes]
gi|410294560|gb|JAA25880.1| mediator complex subunit 26 [Pan troglodytes]
Length = 600
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|354473953|ref|XP_003499196.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Cricetulus griseus]
Length = 563
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 8 AVLEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIE 63
>gi|301753823|ref|XP_002912824.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26-like [Ailuropoda melanoleuca]
Length = 579
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 11 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 66
>gi|111494163|gb|AAI10431.1| Mediator complex subunit 26 [Homo sapiens]
Length = 600
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|426387649|ref|XP_004060276.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Gorilla gorilla gorilla]
Length = 600
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|402904660|ref|XP_003915160.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Papio anubis]
Length = 600
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|383422989|gb|AFH34708.1| mediator of RNA polymerase II transcription subunit 26 [Macaca
mulatta]
Length = 600
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|355703281|gb|EHH29772.1| Mediator complex subunit 26, partial [Macaca mulatta]
Length = 577
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 7 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 62
>gi|281182930|ref|NP_001100770.2| mediator complex subunit 26 [Rattus norvegicus]
Length = 588
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIE 85
>gi|149036182|gb|EDL90848.1| solute carrier family 35, member E1 (predicted) [Rattus norvegicus]
Length = 561
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 3 AVLEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIE 58
>gi|268839392|ref|NP_081761.2| mediator of RNA polymerase II transcription subunit 26 [Mus
musculus]
gi|81885976|sp|Q7TN02.1|MED26_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 7; Short=CRSP complex
subunit 7; AltName: Full=Mediator complex subunit 26
gi|32452052|gb|AAH54737.1| Mediator complex subunit 26 [Mus musculus]
gi|148678857|gb|EDL10804.1| cofactor required for Sp1 transcriptional activation, subunit 7
[Mus musculus]
Length = 588
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLERYPITKEALEETRLGKLINDVRKKTKNEELAKRAKRLLRSWQKLIE 85
>gi|417403185|gb|JAA48411.1| Putative mediator of rna polymerase ii transcription subunit 26
[Desmodus rotundus]
Length = 600
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|327285776|ref|XP_003227608.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Anolis carolinensis]
Length = 767
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+++ IT L ET +G+ VN LRKH V K+LV +WK +V
Sbjct: 25 LMKNLKRLSELPITVDILLETGVGKTVNGLRKH--EQVGDFAKNLVARWKKLV 75
>gi|345787643|ref|XP_541963.3| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Canis lupus familiaris]
Length = 599
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|395536767|ref|XP_003770383.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Sarcophilus harrisii]
Length = 208
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
LE P Q ++ L++ L+ L + LK T IG VN++RKHS +V +L + +WK
Sbjct: 49 LELPGQPQENLMEALRELKKKLPSKDVLKSTKIGHTVNKMRKHSDGEVARLAHEVYTEWK 108
Query: 190 DIVDE 194
+++
Sbjct: 109 TFIEK 113
>gi|448083875|ref|XP_004195463.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359376885|emb|CCE85268.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 123 ILEIKEHLEDPDQSED--ALIDLLQSLADMDITFKAL-KETDIGRHVNQLRKHSSNDVRK 179
+ EIK + D+S+D ++ LL L D + ++L +ET +G VN+ R S+ +++
Sbjct: 3 VKEIKSAVSSLDKSKDDVTVLKLLNILNDGVVPSESLLRETKVGVAVNKFRTSSNPEIQS 62
Query: 180 LVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNG 239
+VK ++RKW+ E V+ + + +S ++ DG+ +K + N H+G
Sbjct: 63 IVKKMIRKWR----ESVQNEKTKKKSSVSVSDGNKSGEKGAEQTNSVAKALPKENKFHSG 118
>gi|332025815|gb|EGI65972.1| Transcription elongation factor B polypeptide 3 [Acromyrmex
echinatior]
Length = 710
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I + +LE +ED ++ + L ++ +T + L++T +GR VN LRK+ V
Sbjct: 6 KISHCQRNLETCGDNEDRILHYISKLYNLPVTVQHLQQTGVGRTVNGLRKYHG-AVGDAA 64
Query: 182 KHLVRKWKDIV 192
K LV KWK +V
Sbjct: 65 KTLVCKWKTMV 75
>gi|401625778|gb|EJS43771.1| dst1p [Saccharomyces arboricola H-6]
Length = 309
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSLADMDI-TFKALKETDIGRHVNQLRKHSSNDVRK 179
K +L ++LE ++ A++++L+ L + T K L+ET +G VN+ +K ++ +V K
Sbjct: 4 KEVLVHVKNLEKNKSNDIAVLEILRVLEKEFVPTEKLLRETKVGVEVNKFKKSNNVEVSK 63
Query: 180 LVKHLVRKWKDIVDE 194
LVK ++ WKD +++
Sbjct: 64 LVKKMIGSWKDAINK 78
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 128 EHLEDPDQSEDALIDLLQSLADMDI-TFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
++LE +++ ++D+L++L + T K L+ET +G VN+ +K + ++ KLVK ++
Sbjct: 11 KNLEKFKTNDETVLDILKALEKEVVPTEKLLRETKVGVEVNKFKKSQNAEIVKLVKRMIS 70
Query: 187 KWKDIVDE 194
WK+ +++
Sbjct: 71 SWKETINK 78
>gi|108708321|gb|ABF96116.1| expressed protein [Oryza sativa Japonica Group]
gi|215767872|dbj|BAH00101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 264
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 292 ESTFDADSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
+++ +++L + ++ LQE Y+ NAK+QRTIQV+D ++PK +N
Sbjct: 194 QNSVQVNAKLEATKRMLQEGYQEFNNAKKQRTIQVVDPQDLPKQRN 239
>gi|345319319|ref|XP_001520358.2| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Ornithorhynchus anatinus]
Length = 792
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 218 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRNWQKLIE 273
>gi|432883684|ref|XP_004074328.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Oryzias latipes]
Length = 658
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
L+ L+ L ++ +T L ET +G+ VN RKH +L K LV KWK +V +
Sbjct: 25 LLKALKRLGELPMTVHILVETGVGKTVNSFRKHQVAG--ELAKSLVAKWKKLVPQ 77
>gi|401841345|gb|EJT43749.1| DST1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 180
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 132 DPDQSEDALIDLLQSLADMDITF----KALKETDIGRHVNQLRKHSSNDVRKLVKHLVRK 187
+ ++S DA + LQ L D+D F K L+ET +G VN+ +K ++ ++ +LVK ++
Sbjct: 14 EKNRSNDAAV--LQILHDLDKEFVPTEKLLRETKVGVEVNKFKKSTNLEISRLVKKMISS 71
Query: 188 WKDIVDE 194
WKD +++
Sbjct: 72 WKDAINK 78
>gi|330796078|ref|XP_003286096.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
gi|325083915|gb|EGC37355.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
Length = 310
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 123 ILEIKEHLEDP-DQSE-DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
I ++K++LE +QSE D +++ L+ D +I + LK TDIG+ V +LR H + K
Sbjct: 4 IKKLKDNLEKALNQSELDKVLEYLKKANDFEINKEVLKSTDIGKTVGKLRTHKDIGISKQ 63
Query: 181 VKHLVRKWKDIVDEWVKLNQP 201
L+ KWK +++ ++ P
Sbjct: 64 SSILIDKWKKDIEKSTPISTP 84
>gi|405957816|gb|EKC23996.1| Transcription elongation factor B polypeptide 3 [Crassostrea gigas]
Length = 712
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 115 LFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS 174
+ DD + +IL K L++ E L + L +AD+ IT L+ T IG+ +N LRK
Sbjct: 1 MADDIESKILRYKSRLQN-STDEGKLQETLLKIADLPITVDILQRTKIGKVINGLRKR-D 58
Query: 175 NDVRKLVKHLVRKWKDIV 192
D+ + K +V +WK +V
Sbjct: 59 GDLGFIAKSIVSEWKSMV 76
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKW 188
L D E AL DLL+ L ++I L +T IG VN+LRK S +D V L K L++ W
Sbjct: 20 LSDGSGQEQAL-DLLRELQRLNIDLDILTKTRIGMTVNELRKCSKDDEVISLAKSLIKSW 78
Query: 189 KDIV 192
K +
Sbjct: 79 KRFL 82
>gi|165970440|gb|AAI58269.1| LOC100144956 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L L+ L D+ IT L ET IG+ VN LRKH V L K+LV +WK +V
Sbjct: 25 LQKTLKRLGDLPITVDILVETGIGKTVNGLRKHEF--VGDLAKNLVAQWKKLV 75
>gi|444706269|gb|ELW47612.1| Transcription elongation factor B polypeptide 3, partial [Tupaia
chinensis]
Length = 783
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+ + IT L ET +G+ VN LRKH V + LV +WK +V
Sbjct: 2 LLKYLKKLSALPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 52
>gi|359488862|ref|XP_003633834.1| PREDICTED: uncharacterized protein LOC100252575 [Vitis vinifera]
Length = 1656
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
E+ L+ L++L + + AL+ ++G+ VN LR H +++++K + LV WK V+
Sbjct: 350 EEFLLASLRALDKLPVNLHALQTCNVGKSVNHLRSHKNSEIQKKARSLVDTWKRRVE 406
>gi|395821365|ref|XP_003784013.1| PREDICTED: transcription elongation factor A protein 3 [Otolemur
garnettii]
Length = 326
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L I + LE ++ + +DLL+ L +T + L+ T IG VN +RKH S+
Sbjct: 3 QEEELLRIAKKLEKMVARKNMEGALDLLKKLHSSQMTIQLLQTTRIGVAVNGVRKHCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+ L K L++ WK ++D
Sbjct: 63 EAVSLAKVLIKNWKRLLD 80
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 125 EIKEHLEDPDQSED--ALIDLLQSLADMDI-TFKALKETDIGRHVNQLRKHSSNDVRKLV 181
E+K + + ++S + ++ LL L D + T K L+ET +G VN+ R H + ++ LV
Sbjct: 5 EVKSTISNLEKSAEDTTILKLLNILNDEVVPTEKLLRETKVGVVVNKYRGHDNKEISSLV 64
Query: 182 KHLVRKWKDIV 192
K ++R W++ V
Sbjct: 65 KKMIRGWREAV 75
>gi|432095529|gb|ELK26681.1| Mediator of RNA polymerase II transcription subunit 26 [Myotis
davidii]
Length = 513
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 24 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRNWQKLIE 79
>gi|449268226|gb|EMC79096.1| hypothetical protein A306_13529, partial [Columba livia]
Length = 175
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE P Q ++ LI+ L+ L + + L T IG VN++RKHS +DV L K +
Sbjct: 13 KSMLELPGQPKENLIEALEELKKKIPSKEVLLSTKIGHTVNKMRKHSDHDVASLAKDIYT 72
Query: 187 KWKDIV 192
+W+ +
Sbjct: 73 EWRTFI 78
>gi|156359603|ref|XP_001624856.1| predicted protein [Nematostella vectensis]
gi|156211660|gb|EDO32756.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 126 IKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLV 185
+K LE + + ++ LQ L + L T IG +N LRKH+ DV +L K +
Sbjct: 45 LKLQLESDLSTPEDILSALQELKAKTPSKAVLLSTQIGHTINSLRKHTCQDVCQLAKEIF 104
Query: 186 RKWKDIVDE 194
RKWK + E
Sbjct: 105 RKWKHFIVE 113
>gi|405964907|gb|EKC30346.1| Mediator of RNA polymerase II transcription subunit 26 [Crassostrea
gigas]
Length = 650
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVDEWV 196
D ++ ++ L IT L++T IG++VN+LRK + N+ + K K LVR W+ +++ V
Sbjct: 44 DGVLAVITILETYPITRDVLEQTRIGKYVNELRKKTDNEQLAKRAKKLVRNWQKLINPEV 103
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 25/136 (18%)
Query: 140 LIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKL 198
+ ++L L +D+ T + L+ET IG VN+LR H+ V +L K +V KWK V
Sbjct: 29 ITEILGRLKSDVVATEQILRETKIGMIVNKLRGHADKTVSELAKDIVNKWKKDVSM---- 84
Query: 199 NQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAP 258
+P +SS G + +++ NG G+SG D P + +
Sbjct: 85 -KPKSGSSSDAKGGVAMKKEASTNG---------------GTSGKD----TPNKSTPTPS 124
Query: 259 LPRKEALSSRPPQSAS 274
+PRK SS P S
Sbjct: 125 VPRKTGGSSVDPMKRS 140
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKW 188
L D E AL DLL+ L ++I L +T IG VN+LRK S +D V L K L++ W
Sbjct: 20 LSDGSGQEQAL-DLLRELQRLNIDLDILTKTRIGMTVNELRKCSKDDEVISLAKSLIKSW 78
Query: 189 KDIV 192
K +
Sbjct: 79 KRFL 82
>gi|302309342|ref|NP_986676.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|299788313|gb|AAS54500.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|374109927|gb|AEY98832.1| FAGR011Wp [Ashbya gossypii FDAG1]
Length = 304
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 128 EHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
++LE E ++ +L+ L ++ T K L+ET +G VNQ +K S++++ KLVK ++
Sbjct: 11 KNLEKNKSDEQTVLRILRILDKELVATEKLLRETKVGVIVNQFKKSSNDEIAKLVKKMIG 70
Query: 187 KWKD 190
WKD
Sbjct: 71 TWKD 74
>gi|371591277|gb|AEX55000.1| Crspy/Crsp7/Med26 protein [Ornithorhynchus anatinus]
Length = 599
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTRNEELAKRAKKLLRSWQKLIE 85
>gi|355557663|gb|EHH14443.1| hypothetical protein EGK_00370, partial [Macaca mulatta]
gi|355745018|gb|EHH49643.1| hypothetical protein EGM_00341, partial [Macaca fascicularis]
Length = 750
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+ + IT L ET +G+ VN LRKH V + LV +WK +V
Sbjct: 2 LLKYLKKLSTLPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 52
>gi|391333720|ref|XP_003741258.1| PREDICTED: uncharacterized protein LOC100897823 [Metaseiulus
occidentalis]
Length = 570
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I E LE + L D L L M++T L++T IG+ VN + KH +
Sbjct: 5 KIKEYCRRLEKHSEDRAVLKDTLYKLNKMEVTVDILQKTGIGKVVNGI-KHRGGKTGDMA 63
Query: 182 KHLVRKWKDIVD 193
L++KW+++VD
Sbjct: 64 ADLIKKWRNVVD 75
>gi|410950824|ref|XP_003982103.1| PREDICTED: mediator of RNA polymerase II transcription subunit 26
[Felis catus]
Length = 472
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 8 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 63
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVR 178
QK++ +I + D E AL DLL++L ++I L +T IG VN+LRK S + +V
Sbjct: 11 QKKMSKITTN--DGTGQEQAL-DLLKALQSLNINLDILTKTRIGMTVNELRKSSKDEEVI 67
Query: 179 KLVKHLVRKWKDIV 192
L K L++ WK +
Sbjct: 68 ALAKTLIKNWKRFL 81
>gi|301754948|ref|XP_002913387.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Ailuropoda melanoleuca]
Length = 756
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+ + IT L ET +G+ VN LRKH V + LV +WK +V
Sbjct: 8 LLKYLKKLSTLPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 58
>gi|26350197|dbj|BAC38738.1| unnamed protein product [Mus musculus]
Length = 588
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLERYPITKEALEETRLGKLINDVRKKNKNEELAKRAKRLLRSWQKLIE 85
>gi|389612992|dbj|BAM19886.1| conserved hypothetical protein [Papilio xuthus]
Length = 94
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 123 ILEIKEH----LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
+L++ +H +E E ++ + L +D+T + L+ET +GR VN LRK DV
Sbjct: 4 VLDLIKHYQHAIEKYPHDEQKILKCINKLFQLDVTVQHLQETGVGRTVNALRK-EPGDVG 62
Query: 179 KLVKHLVRKWKDIV 192
+ + LV KWK +V
Sbjct: 63 QAARALVYKWKVMV 76
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L+I + LE + + +DLL+ L ++ + L+ T IG VN +RK S+
Sbjct: 3 QKEELLKITKKLEKMVAKKHTEGALDLLKRLNSCQMSIQLLQTTRIGVAVNGVRKQCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVALAKVLIKNWKQLLD 80
>gi|125574197|gb|EAZ15481.1| hypothetical protein OsJ_30894 [Oryza sativa Japonica Group]
Length = 166
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 152 ITFKALKETDIGRHVNQLR-KHSSNDVRKLVKHLVRKWKDIVDE 194
+TF+ L+ + IG+ ++ LR KHSS VR L L + WK IVDE
Sbjct: 1 MTFETLEASRIGKTISGLRRKHSSEKVRGLAAALYKNWKAIVDE 44
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMD 328
D++LA+AR++LQ+ YK +AK+QR IQV+D
Sbjct: 102 DAKLAAARRKLQDGYKEAASAKKQRVIQVID 132
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 132 DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
D + E ID L+ L + +K L T +G+H+ L KH ++ L+ WK I
Sbjct: 23 DGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVLTKHPRQKIKSFAIDLIEIWKGI 82
Query: 192 VDEWVKLNQPG 202
+ + N+ G
Sbjct: 83 IIKETSKNKNG 93
>gi|242034999|ref|XP_002464894.1| hypothetical protein SORBIDRAFT_01g028380 [Sorghum bicolor]
gi|241918748|gb|EER91892.1| hypothetical protein SORBIDRAFT_01g028380 [Sorghum bicolor]
Length = 1399
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
I AL+ IG+ VN LR H + +++K K LV WK VD +K N
Sbjct: 184 INLSALQSCSIGKSVNHLRSHKNLEIQKKAKCLVENWKKRVDAEMKSN 231
>gi|449544753|gb|EMD35725.1| hypothetical protein CERSUDRAFT_115683 [Ceriporiopsis subvermispora
B]
Length = 306
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 136 SEDALIDLLQSLA-DMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
S++ ++ +L +L + IT L+E+ G V +LR H S DV L K +V+KWK V++
Sbjct: 18 SDEEIVTILNTLKKEAKITESILRESKAGLAVGKLRSHQSKDVADLAKEIVKKWKTEVEK 77
>gi|431891270|gb|ELK02147.1| Transcription elongation factor B polypeptide 3 [Pteropus alecto]
Length = 776
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+ + IT L ET +G+ VN LRKH V + LV +WK +V
Sbjct: 27 LLKYLKKLSTLPITVDILAETGVGKTVNSLRKH--EHVGNFARDLVAQWKKLV 77
>gi|348570792|ref|XP_003471181.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Cavia porcellus]
Length = 825
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+ + IT L ET +G+ VN RKH V + LV +WK +V
Sbjct: 76 GLLKYLKKLSTLPITVDILAETGVGKTVNSFRKH--EQVGSFARDLVAQWKKLV 127
>gi|195452322|ref|XP_002073303.1| GK14059 [Drosophila willistoni]
gi|194169388|gb|EDW84289.1| GK14059 [Drosophila willistoni]
Length = 676
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
+E Q E L+ + L ++ I F+ L+ET IG+ VN LRK + ++ K LV KWK
Sbjct: 18 IERHGQDEKRLLHCISKLFNLPIKFEHLQETGIGKTVNALRK-INGEIGVAAKTLVTKWK 76
Query: 190 DIV 192
+V
Sbjct: 77 AMV 79
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIV 192
++ +DLL+ L+ ++ + L+ T IG VN +RKH S+ +V L K L++ WK ++
Sbjct: 30 QEGALDLLKKLSSCRMSVQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL 86
>gi|426222788|ref|XP_004005564.1| PREDICTED: transcription elongation factor B polypeptide 3 [Ovis
aries]
Length = 758
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+ + IT L ET +G+ VN LRKH V + LV +WK +V
Sbjct: 9 LLKYLKKLSALPITVDILAETGVGKTVNSLRKH--EHVGNFARDLVAQWKKLV 59
>gi|147844703|emb|CAN82134.1| hypothetical protein VITISV_002644 [Vitis vinifera]
Length = 1961
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
E+ L+ L++L + + AL+ ++G+ VN LR H +++++K + LV WK V+
Sbjct: 350 EEFLLASLRALDKLPVNLHALQTCNVGKSVNHLRSHKNSEIQKKARSLVDTWKRRVE 406
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLV 181
++ ++ E ++ +DLL+ L ++I L +T IG VN+LRK S +D V L
Sbjct: 8 LVIFRDFTEAAYSGQEQALDLLRELQRLNIDLDILTKTRIGMTVNELRKCSKDDEVISLA 67
Query: 182 KHLVRKWKDIV 192
K L++ WK +
Sbjct: 68 KSLIKSWKRFL 78
>gi|47216408|emb|CAG01959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 597
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVDEWVKL 198
+++++ L IT +AL+ET +G+ +N +RK + + D+ K K L+R W+ KL
Sbjct: 31 VLEVISCLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQ-------KL 83
Query: 199 NQPGELASSAMMDGDS 214
+PG A+ +G S
Sbjct: 84 IEPGPAAAPGSTNGSS 99
>gi|167517100|ref|XP_001742891.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779515|gb|EDQ93129.1| predicted protein [Monosiga brevicollis MX1]
Length = 903
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 112 YGGLFD-DEQKRIL-EIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQL 169
Y G F DE K++ + E +E D ED ++++L+ L+ +++T LK +++G VN+L
Sbjct: 733 YTGNFTIDELKQLARSLVEAVELGD--EDGVLEILEELSTVEMTVDTLKASNLGVLVNRL 790
Query: 170 RKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSA 208
R + V ++L+ KW+ V E + P ++S+
Sbjct: 791 RGERAGSV---AQNLIEKWRHQVAEQTSPHSPSTASASS 826
>gi|195402303|ref|XP_002059746.1| GJ18459 [Drosophila virilis]
gi|194155960|gb|EDW71144.1| GJ18459 [Drosophila virilis]
Length = 1706
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I ++ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QNQIQQLTSHLSQALDQNYDVVNMEAVLSVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV 192
ND + + K L++KW+++V
Sbjct: 63 KNDQLARRAKSLLKKWREMV 82
>gi|193700047|ref|XP_001944769.1| PREDICTED: hypothetical protein LOC100165208 [Acyrthosiphon pisum]
Length = 596
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
D +++ + L+ + IT + L+ T IGR VN LRK+ N + + K LV +WK++V
Sbjct: 30 DKIMNCITKLSRLPITVQNLQNTGIGRVVNNLRKYDGN-IGESAKTLVIQWKNVV 83
>gi|260811408|ref|XP_002600414.1| hypothetical protein BRAFLDRAFT_129066 [Branchiostoma floridae]
gi|229285701|gb|EEN56426.1| hypothetical protein BRAFLDRAFT_129066 [Branchiostoma floridae]
Length = 593
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIV 192
+ +++++ +L +T AL++T +G++VN +R+ ++N D+ K +K LVR W+ ++
Sbjct: 26 EGVVEVVSALEKTTMTKDALEKTRLGKYVNDVRRKTNNADLAKRLKQLVRIWQKLI 81
>gi|115448613|ref|NP_001048086.1| Os02g0742000 [Oryza sativa Japonica Group]
gi|46390282|dbj|BAD15732.1| putative serine-threonine rich antigen [Oryza sativa Japonica
Group]
gi|46390326|dbj|BAD15775.1| putative serine-threonine rich antigen [Oryza sativa Japonica
Group]
gi|113537617|dbj|BAF10000.1| Os02g0742000 [Oryza sativa Japonica Group]
Length = 1671
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
I AL+ IG+ VN LR H + +++K K LV WK VD +K N
Sbjct: 408 INLTALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDAEMKSN 455
>gi|218191558|gb|EEC73985.1| hypothetical protein OsI_08894 [Oryza sativa Indica Group]
Length = 1315
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
I AL+ IG+ VN LR H + +++K K LV WK VD +K N
Sbjct: 351 INLTALQSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDAEMKSN 398
>gi|47498086|ref|NP_998224.1| mediator of RNA polymerase II transcription subunit 26 [Danio
rerio]
gi|28279113|gb|AAH45849.1| Cofactor required for Sp1 transcriptional activation, subunit 7
[Danio rerio]
Length = 589
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A++D++ +L IT +AL+ET +G+ +N +RK + + D+ K K L+R W+ +++
Sbjct: 30 AVLDVITNLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQKLIE 85
>gi|158706142|sp|Q90YL3.2|MED26_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 7; Short=CRSP complex
subunit 7; AltName: Full=Mediator complex subunit 26
Length = 589
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A++D++ +L IT +AL+ET +G+ +N +RK + + D+ K K L+R W+ +++
Sbjct: 30 AVLDVITNLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQKLIE 85
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
E K++++ + + ED + L Q + T + L+ET G + +LR H ++
Sbjct: 5 EVKKLIKDLQTATTTGKPEDGVTILKQLKQSVVATEELLRETKAGLAIGKLRSHPRKEIA 64
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASS 207
L K LV+KWK+ V+ K+ G S+
Sbjct: 65 DLAKELVKKWKEAVEAGKKVKAAGGTPST 93
>gi|195133956|ref|XP_002011404.1| GI14059 [Drosophila mojavensis]
gi|193912027|gb|EDW10894.1| GI14059 [Drosophila mojavensis]
Length = 1424
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I ++ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QNQIQQLTSHLSQALDQNYDVVNMEAVLSVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV 192
ND + + K L++KW+++V
Sbjct: 63 KNDQLARRAKSLLKKWREMV 82
>gi|14486363|gb|AAK61395.1| CRSP70 [Danio rerio]
Length = 589
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A++D++ +L IT +AL+ET +G+ +N +RK + + D+ K K L+R W+ +++
Sbjct: 30 AVLDVITNLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQKLIE 85
>gi|263359671|gb|ACY70507.1| hypothetical protein DVIR88_6g0044 [Drosophila virilis]
Length = 1641
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I ++ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QNQIQQLTSHLSQALDQNYDVVNMEAVLSVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV 192
ND + + K L++KW+++V
Sbjct: 63 KNDQLARRAKSLLKKWREMV 82
>gi|413955113|gb|AFW87762.1| hypothetical protein ZEAMMB73_054037 [Zea mays]
Length = 1641
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELAS--SAM 209
I AL+ IG+ VN LR H + +++K K LV WK VD +K N L S S
Sbjct: 397 INLSALQSCSIGKSVNHLRSHKNLEIQKKAKCLVENWKKRVDAEMKSNDVKPLVSGQSVS 456
Query: 210 MDGDSPQQKIPQNGN 224
G + Q+I G
Sbjct: 457 WSGKAGFQEISNAGT 471
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 120 QKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
+K E+K LE + + D+L L D ++ + L ET IG V R V K
Sbjct: 8 EKEAREMKAKLEKDGVDVNTVRDILTLLMDKEVPVQVLIETKIGVTVKSKRSDDDRKVAK 67
Query: 180 LVKHLVRKWKDIVDEWVKLNQPGELAS-------SAMMDGDSPQQKI 219
L L KWK++V + QPG A+ SA +G + ++K+
Sbjct: 68 LASELTSKWKEVV---ARSRQPGSSAAGQEKPNKSAAGEGSNGKEKV 111
>gi|414885958|tpg|DAA61972.1| TPA: hypothetical protein ZEAMMB73_446855 [Zea mays]
Length = 264
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 36/186 (19%)
Query: 144 LQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE 203
L +L + ++ AL D+ V L +H S +R L + +VR W+ V+ + +
Sbjct: 72 LVTLMQVPVSLGALASGDLIETVAALGQHESARIRSLARDVVRGWRSDVENEL------D 125
Query: 204 LASSAMMDGDS-PQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRK 262
A +AM +S P +P+ +V N ++G D E ++K P P K
Sbjct: 126 RAKAAMEALNSLPPLMLPE--EEKVACLVVDANAPVVATGKD------ETRTKDTP-PAK 176
Query: 263 EALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQR 322
+ S+R P + + S + D LAS RK L+E Y+ ENAKR+R
Sbjct: 177 FS-SNRTPVAGT------------------SCGETDKILASKRK-LREGYQEAENAKRRR 216
Query: 323 TIQVMD 328
+ +D
Sbjct: 217 RVCSID 222
>gi|219120375|ref|XP_002180927.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407643|gb|EEC47579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 323
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 122 RILEIKEHLE-----DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND 176
R+ ++KE L D +S + + D+LQ+L ++T + L +T IG+ V+QL+ H +
Sbjct: 8 RVKDLKEALSKELPVDSGESVERVHDVLQALDRCEMTLEILSDTMIGKIVSQLKSHPT-- 65
Query: 177 VRKLVKHLVRKWKDI 191
+ K LV+KWK +
Sbjct: 66 LNTTAKALVKKWKQV 80
>gi|413955116|gb|AFW87765.1| hypothetical protein ZEAMMB73_183564 [Zea mays]
gi|413955117|gb|AFW87766.1| hypothetical protein ZEAMMB73_183564 [Zea mays]
Length = 1626
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELAS--SAM 209
I AL+ IG+ VN LR H + +++K K LV WK VD +K N L S S
Sbjct: 410 INLSALQSCSIGKSVNHLRSHKNLEIQKKAKCLVENWKKRVDAEMKSNDVKPLVSGQSVS 469
Query: 210 MDGDSPQQKIPQNGN 224
G + Q+I G
Sbjct: 470 WSGKAGFQEISNAGT 484
>gi|413920967|gb|AFW60899.1| hypothetical protein ZEAMMB73_830673 [Zea mays]
gi|413920968|gb|AFW60900.1| hypothetical protein ZEAMMB73_830673 [Zea mays]
Length = 1527
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELAS--SAM 209
I AL+ IG+ VN LR H + +++K K LV WK VD +K N L S S
Sbjct: 328 INLSALQSCSIGKSVNHLRSHKNLEIQKKAKCLVENWKKRVDAEMKSNDVKPLVSGQSVS 387
Query: 210 MDGDSPQQKIPQNGN 224
G + Q+I G
Sbjct: 388 WSGKAGFQEISNAGT 402
>gi|195064334|ref|XP_001996547.1| GH23935 [Drosophila grimshawi]
gi|193892093|gb|EDV90959.1| GH23935 [Drosophila grimshawi]
Length = 1570
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
Query: 120 QKRILEIKEHLE---DPDQ---SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I ++ HL DP+ + +A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QNQIQQLTSHLSQALDPNYDVINMEAVLAVICTLEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV 192
ND + + K L++KW+++V
Sbjct: 63 KNDQLARRAKSLLKKWREMV 82
>gi|321465337|gb|EFX76339.1| hypothetical protein DAPPUDRAFT_306247 [Daphnia pulex]
Length = 540
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVDE 194
++ + L +T +AL+ T +GR VN++RK + ND + + K LVR+W+D+V +
Sbjct: 35 LEAVSLLEKTPVTKEALETTRLGRLVNEMRKKTKNDSLARRAKDLVRRWRDMVSK 89
>gi|50286491|ref|XP_445674.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524979|emb|CAG58585.1| unnamed protein product [Candida glabrata]
Length = 306
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 129 HLEDPDQSEDALIDLLQSLADMDI-TFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRK 187
+LE ++++++++L+ L + T K L+ET +G VN+ +K + ++ KLVK ++
Sbjct: 13 NLEKSKGNDESVLEILRILEKEVVPTEKLLRETKVGVEVNKFKKSENAEISKLVKRMIGA 72
Query: 188 WKDIVDEW----VKLNQPGELASSAMMDG 212
WKD +++ ++ QP + SA G
Sbjct: 73 WKDAINKHKKAKLRQQQPPQQGVSASSGG 101
>gi|224058268|ref|XP_002198009.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Taeniopygia guttata]
Length = 208
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE P Q ++ L++ L+ L + + L T IG VN++RKH +V L + + R
Sbjct: 46 KSILELPGQPKENLMEALEELKKKIPSKEVLLSTKIGHTVNRMRKHPDPEVSGLARAICR 105
Query: 187 KWKDIVDE 194
+W+ + E
Sbjct: 106 EWRAFIRE 113
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 120 QKRILEIKEHL-----EDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSS 174
++ +L+I++ L D E AL DLL+ L ++I L +T IG VN+LRK S
Sbjct: 4 EEEVLKIQKKLGKMTSSDGTGQEQAL-DLLRELQRLNIDLDILTKTRIGMTVNELRKCSK 62
Query: 175 ND-VRKLVKHLVRKWKDIV 192
+D V L K L++ WK +
Sbjct: 63 DDEVISLAKTLIKSWKRFL 81
>gi|224178736|ref|XP_002197961.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Taeniopygia guttata]
Length = 155
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE P Q ++ L++ L+ L + + L T IG VN++RKH +V L + + R
Sbjct: 24 KSILELPGQPKENLMEALEELKKKIPSKEVLLSTKIGHTVNRMRKHPDPEVSGLARAICR 83
Query: 187 KWKDIVDE 194
+W+ + E
Sbjct: 84 EWRAFIRE 91
>gi|159163424|pdb|1WJT|A Chain A, Solution Structure Of The N-Terminal Domain I Of Mouse
Transcription Elongation Factor S-Ii Protein 3
Length = 103
Score = 42.0 bits (97), Expect = 0.50, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 116 FDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN 175
++E RI + E + ++E AL DLL+ L ++ + L+ T IG VN +RKH S+
Sbjct: 10 LEEELLRIAKKLEKMVSRKKTEGAL-DLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSD 68
Query: 176 -DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 69 KEVVSLAKVLIKNWKRLLD 87
>gi|410967334|ref|XP_003990175.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Felis catus]
Length = 208
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 102 IENDNDIIDPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMD 151
I+N DP ++ + KR++ I K LE P Q+ + L++ L+ L
Sbjct: 11 IQNSPQKKDPGAKIYKQATIESLKRVVVIEDIKRWKTTLELPGQTRENLVEALRELKKKI 70
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
+ + LK T IG VN++R+HS ++V L + +W+ +++
Sbjct: 71 PSREVLKSTRIGHTVNKMRRHSDSEVACLAGEVYTEWRTFIEK 113
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 134 DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL-VKHLVRKWKDIV 192
++SE + +D+L+ L +T + L++T IG VN+LRK +++ ++ K+L+R WK ++
Sbjct: 55 EKSEQSAMDILKILRATPMTVELLQKTRIGMTVNELRKKTTDRSLQVEAKNLIRHWKKLI 114
Query: 193 D 193
+
Sbjct: 115 E 115
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+D L+ L +T++AL T +G+ + L KH ++ L L+ WK +V
Sbjct: 34 CVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVV 86
>gi|327270798|ref|XP_003220175.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Anolis carolinensis]
Length = 208
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE Q ++ LI+ L L + + L+ T IG VN++RKH NDV L K +
Sbjct: 46 KTMLELSAQPKENLIEALMELKKKIPSKEVLRSTKIGHTVNKMRKHPDNDVSALAKEVYS 105
Query: 187 KWKDIV 192
+W+ +
Sbjct: 106 EWRTFI 111
>gi|396472195|ref|XP_003839048.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
gi|312215617|emb|CBX95569.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
Length = 304
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 140 LIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKL 198
+++LL L +D T L+ T IG +N+LR H V++L LV KW+D V + K
Sbjct: 28 ILNLLNGLKTGVDATEDLLRSTRIGVTINRLRTHKDPAVQRLATELVSKWRDQVKKQPKK 87
Query: 199 NQPGELASS 207
P + A++
Sbjct: 88 GTPAKTAAN 96
>gi|351705976|gb|EHB08895.1| Transcription elongation factor B polypeptide 3, partial
[Heterocephalus glaber]
Length = 750
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L+ L+ L+ + IT L ET +G+ VN RKH V + LV +WK +V
Sbjct: 2 LLKYLKKLSTLPITVDILAETGVGKTVNSFRKH--EQVGSFARDLVAQWKKLV 52
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+D L+ L +T++AL T +G+ + L KH ++ L L+ WK +V
Sbjct: 34 CVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVV 86
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 132 DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
D E +D L+ L +T++ L T +G+ + L KH +++ L+ WK+I
Sbjct: 25 DGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQEHASDLIEMWKEI 84
Query: 192 VDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYS 233
V + N+ ASS DSP+ P + +V F S
Sbjct: 85 VIKETNKNKKNGNASSK----DSPKIGSPSAESVKVEKFQKS 122
>gi|66816447|ref|XP_642233.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
gi|74856708|sp|Q54YG9.1|TCEA1_DICDI RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor tf2s
gi|60470313|gb|EAL68293.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
Length = 319
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 123 ILEIKEHLEDP--DQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKL 180
I++ +E LE D D ++ L++ + IT LK TDIG+ V +LR H +
Sbjct: 4 IIKCREQLEKAIKDGEFDKALECLKNAKNFKITKDLLKSTDIGKSVGKLRAHKDIGISSQ 63
Query: 181 VKHLVRKWK 189
K L+ KWK
Sbjct: 64 SKELIDKWK 72
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 47/123 (38%), Gaps = 14/123 (11%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
L+ LLQ L T L+ + IG VN+LR++ V +L L+ KWK V K
Sbjct: 26 LLQLLQPLRTFTATEDLLRHSKIGIAVNRLRQNKDPKVAQLSSQLINKWKADVKTKSKTG 85
Query: 200 QPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPH-NGSSGSDKNNSEPERKSKQAP 258
P A NG D SP P +G S P RKSK P
Sbjct: 86 SPAPAAKGI-------------NGVANGRDATSSPAPKTDGVKKEPSATSNPARKSKVPP 132
Query: 259 LPR 261
R
Sbjct: 133 EKR 135
>gi|325180148|emb|CCA14550.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 508
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L ++L L + + LK T+IG+ VN+L+KH + +R L +KWK+ V
Sbjct: 33 LQNILNKLTMLKVDMDLLKRTNIGKMVNRLKKHQDSVIRGYSSTLTKKWKEQV 85
>gi|296805870|ref|XP_002843759.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
gi|238845061|gb|EEQ34723.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
Length = 297
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 139 ALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
+I LL+ L + T L+ T IG VN+L++H + +V +L +V KW+ V++ K
Sbjct: 25 TIISLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKAPEVARLSSEIVSKWRAEVNKQKK 84
Query: 198 LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFA 231
+ PG DSP K NGN V A
Sbjct: 85 IASPG--------SSDSP--KPTPNGNSTVASAA 108
>gi|322799303|gb|EFZ20691.1| hypothetical protein SINV_02989 [Solenopsis invicta]
Length = 551
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 160 TDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIV 192
T +G+HVN+LR+ SSN+ + K K LVR+W+D+V
Sbjct: 2 TRLGKHVNELRRKSSNEALAKRAKDLVRRWRDMV 35
>gi|357627246|gb|EHJ76990.1| hypothetical protein KGM_12362 [Danaus plexippus]
Length = 638
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 142 DLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIV 192
+++ L +IT + L+ T +G+HVN+LR+ +S + + K LV++W+D+V
Sbjct: 6 EIISILEKFNITKELLETTRLGKHVNELRRKTSEPTLARRAKVLVKRWRDLV 57
>gi|168037704|ref|XP_001771343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677432|gb|EDQ63903.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1785
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 150 MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
+ + KALK +G+ VN LR H + +++K + LV WK VD +KL+
Sbjct: 484 LPVDLKALKTCVVGKSVNHLRGHKNLEIQKKARKLVDVWKKRVDTEMKLS 533
>gi|301759983|ref|XP_002915794.1| PREDICTED: uncharacterized protein C1orf83-like [Ailuropoda
melanoleuca]
Length = 208
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 102 IENDNDIIDPYGGLFD----DEQKRILEI------KEHLEDPDQSEDALIDLLQSLADMD 151
I+N DP G ++ + KR++ I K LE P Q+ + L++ L+ L
Sbjct: 11 IQNSPQKKDPGGKIYKQATIESLKRVVVIEDIKRWKTMLELPGQTRENLVEALRELKKKI 70
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPG 202
+ + LK T IG V++LR+HS +V L + +WK +++ LN+P
Sbjct: 71 PSREVLKSTRIGHTVSKLRQHSDPEVACLAGEVDTEWKTFLEK--HLNRPS 119
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 138 DALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
D +I LL+ L A++ T L+ + G V +LR H++ V L K +V+KW+D V+E
Sbjct: 23 DEVISLLKKLQAEVVPTEDLLRSSKAGVAVGKLRTHATPSVSSLAKEIVKKWRDAVEETK 82
Query: 197 KLNQPGE 203
K + E
Sbjct: 83 KKRKRAE 89
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 132 DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
D + E ID L+ L + +K L T +G+H+ L KH ++ L+ WK I
Sbjct: 23 DGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVLTKHPRQKIKSFAIDLIEIWKGI 82
Query: 192 VDEWVKLNQPG 202
+ + N+ G
Sbjct: 83 IIKETGKNKNG 93
>gi|426230334|ref|XP_004009229.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26 [Ovis aries]
Length = 745
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+ +++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 194 AVQEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 249
>gi|307190183|gb|EFN74298.1| Transcription elongation factor B polypeptide 3 [Camponotus
floridanus]
Length = 727
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 122 RILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
+I + +LE +E ++ + L ++ +T + L+ET +GR VN RK+ + V
Sbjct: 6 KICHYQRNLEKYGDNEARILHCISKLYNLPVTVQHLQETGVGRTVNSFRKYDGS-VGDAS 64
Query: 182 KHLVRKWKDIV 192
K LV KWK +V
Sbjct: 65 KALVYKWKRMV 75
>gi|297276409|ref|XP_002801162.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Macaca mulatta]
Length = 184
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKL 198
A+++++ SL IT +AL+ET +G+ +N +RK + N+ L ++ K ++ W KL
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNE------ELAKRAKKLLRSWQKL 83
Query: 199 NQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSP 234
+P A + G +P + P VP + P
Sbjct: 84 IEPAH-QHEAALRGLTPTLQSPPRSCSPVPLEFWLP 118
>gi|7766840|pdb|1EO0|A Chain A, Conserved Domain Common To Transcription Factors Tfiis,
Elongin A, Crsp70
Length = 77
Score = 41.2 bits (95), Expect = 0.72, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDV 177
+ K +L ++LE ++ A++++L L + T K L+ET +G VN+ +K ++ ++
Sbjct: 2 DSKEVLVHVKNLEKNKSNDAAVLEILHVLDKEFVPTEKLLRETKVGVEVNKFKKSTNVEI 61
Query: 178 RKLVKHLVRKWKDIVD 193
KLVK ++ WKD ++
Sbjct: 62 SKLVKKMISSWKDAIN 77
>gi|149642737|ref|NP_001092358.1| mediator of RNA polymerase II transcription subunit 26 [Bos taurus]
gi|158705955|sp|A5PK23.1|MED26_BOVIN RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Cofactor required for Sp1
transcriptional activation subunit 7; Short=CRSP complex
subunit 7; AltName: Full=Mediator complex subunit 26
gi|148744068|gb|AAI42326.1| MED26 protein [Bos taurus]
gi|296486050|tpg|DAA28163.1| TPA: mediator of RNA polymerase II transcription subunit 26 [Bos
taurus]
Length = 599
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+ +++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVQEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|395329637|gb|EJF62023.1| transcription elongation factor [Dichomitus squalens LYAD-421 SS1]
Length = 300
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
+ +L +L IT L+E+ G V +LR+HSS V +L K +V+KWK V+
Sbjct: 24 VTILNTLKQQAKITEAVLRESKAGLAVGKLRQHSSKQVSELAKEIVKKWKTEVE 77
>gi|350580383|ref|XP_003480809.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Sus scrofa]
Length = 599
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+ +++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVQEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|357138165|ref|XP_003570668.1| PREDICTED: uncharacterized protein LOC100838793 [Brachypodium
distachyon]
Length = 1640
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQ-----PGELAS 206
I AL+ IG+ VN LR + + +++K K LV WK VD +K N+ PG++
Sbjct: 407 INLIALQSCTIGKSVNHLRSYRNPEIQKKAKCLVDNWKKRVDAEMKSNEAKPVVPGQV-- 464
Query: 207 SAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNS 248
SP ++I +G P+ + N GSS NS
Sbjct: 465 -------SPVRRISWSGKG-FPEISNGANRQCGSSEPSPKNS 498
>gi|307199130|gb|EFN79840.1| Transcription elongation factor B polypeptide 3 [Harpegnathos
saltator]
Length = 722
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKD-IVDEW 195
E ++ + L ++ +T + L+ET +GR VN LRK+ V K LV KWK +VDE+
Sbjct: 18 EQLILHCITKLYNLPVTVQHLQETGVGRTVNGLRKYDG-AVGDAAKALVAKWKAMVVDEY 76
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 135 QSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
+S ++ LL+ L + T L+ T IG VN+L++H S DV +L +V KW+ V+
Sbjct: 21 ESSATIVSLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKSPDVARLSSEIVSKWRAEVN 80
Query: 194 EWVKLNQPG 202
+ K PG
Sbjct: 81 KQKKTASPG 89
>gi|440901296|gb|ELR52270.1| Mediator of RNA polymerase II transcription subunit 26, partial
[Bos grunniens mutus]
Length = 572
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+ +++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 29 AVQEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 84
>gi|68390501|ref|XP_696087.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2 [Danio rerio]
gi|325530294|sp|B0UYI1.1|TEAN2_DANRE RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein 2
Length = 210
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKW 188
LE P Q ++ +I+ L+ L + + LK T IG VN LRKHS + +++ L K + + W
Sbjct: 48 LELPGQPKENMIEALKELDKKVPSREVLKSTRIGHTVNNLRKHSDDPEIKSLAKEVYKHW 107
Query: 189 KDIVDE 194
+ ++E
Sbjct: 108 RTFIEE 113
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 135 QSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
+S ++ LL+ L + T L+ T IG VN+L++H S DV +L +V KW+ V+
Sbjct: 21 ESSATIVSLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKSPDVARLSSEIVSKWRAEVN 80
Query: 194 EWVKLNQPG 202
+ K PG
Sbjct: 81 KQKKTASPG 89
>gi|225560163|gb|EEH08445.1| transcription elongation factor S-II [Ajellomyces capsulatus
G186AR]
Length = 306
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 16/120 (13%)
Query: 139 ALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
LI LL+ L + T L+ T IG VN+L++H S DV +L +V KW+ V++ K
Sbjct: 25 TLISLLRELQKGVRPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQ-K 83
Query: 198 LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSD---KNNSEPERKS 254
+ G A+S DSP+ Q P+ SP G++ SD K+ P+++S
Sbjct: 84 VTVGGSPAAS-QRSSDSPK---------QTPNGTASP-ASTGAAASDRLAKSTVPPDKRS 132
>gi|348523209|ref|XP_003449116.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Oreochromis niloticus]
Length = 574
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+++++ L IT +AL+ET +G+ +N +RK + N D+ K K L+R W+ +++
Sbjct: 30 VVVEVISFLEKYPITKEALEETRLGKLINDVRKKTKNEDLAKRAKKLLRNWQKLIE 85
>gi|46114820|ref|XP_383428.1| hypothetical protein FG03252.1 [Gibberella zeae PH-1]
Length = 1377
Score = 40.8 bits (94), Expect = 0.98, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 22/109 (20%)
Query: 198 LNQPGELASSAMMDGDSPQQ--KIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSK 255
++ G S + G SPQQ PQ HQ+P P NG +G+ NS+P S+
Sbjct: 299 VSHQGSFPQSQGLPGQSPQQGYHAPQQSPHQLP------APMNGVAGAQATNSQPPVHSQ 352
Query: 256 QA---PLPRKE-----------ALSSRPPQSASPAAPHSVQRPREQKES 290
A P P+ + + P S +PA P+ VQ Q S
Sbjct: 353 GAAASPYPQTSPHHQQSGPYAPTVPVQAPHSVAPAGPYGVQPGYGQSHS 401
>gi|341900306|gb|EGT56241.1| CBN-MDT-26 protein [Caenorhabditis brenneri]
Length = 560
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 125 EIKEHLEDPDQSEDALI--DLLQSLADMDITFKALKETDIGRHVNQLRKHSSND---VRK 179
EIK+ L+ +++D + LL+ + M + + L+ET IG VNQLRK + +
Sbjct: 29 EIKKRLQLAAENDDQTLCETLLKEVRPMVTSREILEETGIGFAVNQLRKQYFKKWPALSR 88
Query: 180 LVKHLVRKWKDIVDEWVK 197
+ + +++ W +IV E VK
Sbjct: 89 ITREIIKSWSEIVCEEVK 106
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-NDVRKLVKHLVRKWKDIVDE 194
+DLL+ L + I L T IG VN LRK S +V + K L++ WK V E
Sbjct: 30 LDLLKVLGRLKINLNILTNTRIGMTVNNLRKTSKEEEVVTVAKSLIKTWKKFVPE 84
>gi|295657881|ref|XP_002789505.1| DNA damage response protein RcaA [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283290|gb|EEH38856.1| DNA damage response protein RcaA [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 673
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 16/130 (12%)
Query: 124 LEIKEH-----LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
L+IK H P +++D L L SL D+D+ D HV Q +++++ +
Sbjct: 115 LKIKWHPIVLSFSFPSKAKDPLKHALSSLEDLDVKTIIPYIVDRTTHVVQSKRNTTKGLH 174
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-----DGDS----PQQKIPQNGNH--QV 227
L+ +K + V PG+L + D D+ P Q +P G Q
Sbjct: 175 ALINGKYIVYKSYIQAIVYATTPGDLEREESLCPLEEDFDAAWPDPAQYLPPRGKEPTQS 234
Query: 228 PDFAYSPNPH 237
PD +Y PNP+
Sbjct: 235 PDTSYQPNPN 244
>gi|380793607|gb|AFE68679.1| mediator of RNA polymerase II transcription subunit 26, partial
[Macaca mulatta]
Length = 92
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+++++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 30 AVLEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 85
>gi|432962708|ref|XP_004086749.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Oryzias latipes]
Length = 207
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
I+ K LE P Q+++ L+ +L L+ + + L+ T IG VN+LR+H +V
Sbjct: 41 IMRYKATLELPAQTKENLLTVLTELSKKMPSREVLRSTRIGHVVNRLRRHQDPEVSSAAA 100
Query: 183 HLVRKWKDIVDE 194
L W+ + E
Sbjct: 101 RLYSDWRTFIQE 112
>gi|328876868|gb|EGG25231.1| RNA polymerase II elongation factor [Dictyostelium fasciculatum]
Length = 325
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 125 EIKEHLEDPDQ-----SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
EIK D D+ S D ++ LL+++ ++I+ LK T IG+ V LR H ++ V K
Sbjct: 4 EIKSLRADLDKAVEENSIDEIVALLKAIGLLNISKDLLKTTLIGKSVGLLRTHKNSAVSK 63
Query: 180 LVKHLVRKWKDIVDEWVKLNQP 201
LV KWKD + K+++P
Sbjct: 64 ESGVLVDKWKDQLQIPKKISEP 85
>gi|168010859|ref|XP_001758121.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690577|gb|EDQ76943.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1651
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 150 MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGE 203
+ + ALK +G+ VN LR H + +++K + LV WK VD +KL+ G+
Sbjct: 354 LPVDLNALKTCVVGKSVNHLRGHKNVEIQKKARKLVDVWKKRVDSEMKLSGEGK 407
>gi|338718667|ref|XP_001915032.2| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 26-like [Equus caballus]
Length = 583
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
A+ +++ SL IT +AL+ET +G+ +N +RK + N ++ K K L+R W+ +++
Sbjct: 14 AVQEVISSLEKYPITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLIE 69
>gi|125543480|gb|EAY89619.1| hypothetical protein OsI_11145 [Oryza sativa Indica Group]
Length = 534
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV-DEW 195
+D + + L +L + +T + L TD+ V LR+H S +R L ++VR W+ V E
Sbjct: 66 DDVMAESLLTLRLVPVTARTLATTDLAGIVGALRRHESERIRGLATYIVRGWRVAVRREL 125
Query: 196 VKLN 199
V++
Sbjct: 126 VRIG 129
>gi|440897840|gb|ELR49450.1| Transcription elongation factor B polypeptide 3, partial [Bos
grunniens mutus]
Length = 750
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+ L+ L+ + IT L ET +G+ VN LRKH V + LV +WK +V
Sbjct: 1 LKYLKKLSALPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLV 50
>gi|403412176|emb|CCL98876.1| predicted protein [Fibroporia radiculosa]
Length = 348
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 141 IDLLQSLA-DMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
+++L++L + IT L+E+ G V +LR H++ +V L K +V+KWK V+
Sbjct: 23 VNILKTLKQEAKITEAILRESKAGLAVGKLRSHAAKEVSDLAKEIVKKWKTEVE 76
>gi|194913485|ref|XP_001982708.1| GG16437 [Drosophila erecta]
gi|190647924|gb|EDV45227.1| GG16437 [Drosophila erecta]
Length = 1503
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 120 QKRILEIKEHLEDP-DQSEDAL-----IDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I E+ HL DQ+ D + + ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QIQIQELTTHLSQALDQNYDVVNMDTVVSVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV----DEWVKLNQPGELASS 207
N+ + + K L++KW+++V L P +++SS
Sbjct: 63 KNEHLARRAKSLLKKWREMVGIQQTPTENLTHPSQISSS 101
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 141 IDLLQSLA-DMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
I++LQ L D + L+E+ G V +LR S+ V L K LV+KWK V+ K
Sbjct: 25 INILQVLKKDFQVNETILRESKAGLAVGKLRSSSTKAVSDLAKELVKKWKAEVE---KAK 81
Query: 200 QPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNG 239
G AS +G +P +K VP +P NG
Sbjct: 82 GSGN-ASPKPTNGSAPARK------ASVPGTPTTPTIVNG 114
>gi|302772979|ref|XP_002969907.1| hypothetical protein SELMODRAFT_440870 [Selaginella moellendorffii]
gi|300162418|gb|EFJ29031.1| hypothetical protein SELMODRAFT_440870 [Selaginella moellendorffii]
Length = 1416
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 150 MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAM 209
+ + ALK +G+ VN L+ H +++K + LV WK V VK Q GE S
Sbjct: 377 LPVDLDALKSCHVGKSVNNLKSHRMVEIQKKARKLVETWKKRVGAEVK--QSGEKMGSKQ 434
Query: 210 MDGDSPQQKIPQNGNHQVPDFAYSPNPHN 238
+ P Q + ++ FA S P+
Sbjct: 435 APANDPLQPVAKDAKSST-KFASSNGPNT 462
>gi|157127129|ref|XP_001661048.1| hypothetical protein AaeL_AAEL010723 [Aedes aegypti]
gi|108873044|gb|EAT37269.1| AAEL010723-PA, partial [Aedes aegypti]
Length = 646
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
E L+ + L + ++ + LK+T IGR VN LRK+ +V K LV KWK++V
Sbjct: 22 EARLVHCIGKLYRLPVSVQHLKDTGIGRTVNGLRKYDG-EVGVAAKALVSKWKNMV 76
>gi|302799250|ref|XP_002981384.1| hypothetical protein SELMODRAFT_444816 [Selaginella moellendorffii]
gi|300150924|gb|EFJ17572.1| hypothetical protein SELMODRAFT_444816 [Selaginella moellendorffii]
Length = 1413
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 150 MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAM 209
+ + ALK +G+ VN L+ H +++K + LV WK V VK Q GE S
Sbjct: 377 LPVDLDALKSCHVGKSVNNLKSHRMVEIQKKARKLVETWKKRVGAEVK--QSGEKMGSKQ 434
Query: 210 MDGDSPQQKIPQNGNHQVPDFAYSPNPHN 238
+ P Q + ++ FA S P+
Sbjct: 435 APANDPLQPVAKDAKSST-KFASSNGPNT 462
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 35/140 (25%)
Query: 143 LLQSLADMDITFKALKETDIGRHVNQLRKHSSND-VRKLVKHLVRKWKDIVDEWVKLNQP 201
LL L+ + ++ + +++T+IG VN +RK ++D V K K++++ WK++VD
Sbjct: 31 LLDQLSKIPMSIEIIQKTNIGIKVNMMRKKVTDDAVAKRAKNIIKDWKNVVDG------- 83
Query: 202 GELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPR 261
S + DG +P K H S + ++PE+K +AP R
Sbjct: 84 ---KSKSQDDGGAPPAK-----------------KHRKESVEE---AKPEKKKIEAPYKR 120
Query: 262 KEALSSRP---PQSASPAAP 278
E SSRP Q AS + P
Sbjct: 121 PEP-SSRPEIVAQFASASFP 139
>gi|125531306|gb|EAY77871.1| hypothetical protein OsI_32915 [Oryza sativa Indica Group]
Length = 262
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
D++LA+AR++LQ+ YK +AK+QR IQV+D PK N
Sbjct: 198 DAKLAAARRKLQDGYKEAASAKKQRVIQVID---TPKKVN 234
>gi|357119771|ref|XP_003561607.1| PREDICTED: uncharacterized protein LOC100843529 [Brachypodium
distachyon]
Length = 387
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 152 ITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWV 196
T ++ T+I + V LRKH+S +R+L L+ W+ V+EW+
Sbjct: 132 FTVDTVRVTEIIKAVQPLRKHASKQIRQLAGSLIEGWQATVNEWM 176
>gi|315046468|ref|XP_003172609.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
gi|311342995|gb|EFR02198.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
Length = 297
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 135 QSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
+S ++ LL+ L + T L+ T IG VN+L++H + DV +L +V KW+ V+
Sbjct: 21 ESSATIVSLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKAPDVARLASEIVSKWRAEVN 80
Query: 194 EWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDK 245
+ K P + DSP+ P + + P A + P + + DK
Sbjct: 81 KQKKTASP--------VASDSPK---PSSNGNGTPASAANDKPQSSTVHPDK 121
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 132 DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
D E ID L+ L + +K L T +G+H+ L KH ++ L+ WK I
Sbjct: 23 DGKHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVLTKHPRLKIKAFAIDLIEIWKGI 82
Query: 192 VDEWVKLNQPG 202
+ + N+ G
Sbjct: 83 IIKETSKNKNG 93
>gi|126343388|ref|XP_001364305.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein 2-like [Monodelphis domestica]
Length = 208
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 130 LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
LE P Q ++ L++ L+ L + LK T IG VN++RKHS +V L + +W+
Sbjct: 49 LELPGQPQENLLEALRELKKKLPSKDVLKSTRIGHTVNKMRKHSDGEVASLANEVYTEWR 108
Query: 190 DIVDE 194
+++
Sbjct: 109 TFIEK 113
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 119 EQKRILEIKEHLED--PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN- 175
+++ +L I LE ++ + +DLL+ L ++ + L+ T IG VN +RK S+
Sbjct: 3 QEEELLRIARKLEKMVARRNTEGALDLLKKLNSCPMSIQLLQTTRIGVAVNGVRKRCSDK 62
Query: 176 DVRKLVKHLVRKWKDIVD 193
+V L K L++ WK ++D
Sbjct: 63 EVVALAKVLIKNWKRLLD 80
>gi|171424|gb|AAA34580.1| DST1 [Saccharomyces cerevisiae]
gi|172773|gb|AAA88734.1| DNA strand transferase alpha [Saccharomyces cerevisiae]
Length = 309
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
K +L ++LE ++ A++++L L + T K L+ET +G VN+ +K ++ ++ K
Sbjct: 4 KEVLVHVKNLEKNKSNDAAVLEILHVLDKEFFPTEKLLRETKVGVEVNKFKKSTNVEISK 63
Query: 180 LVKHLVRKWK 189
LVK ++ WK
Sbjct: 64 LVKKMISSWK 73
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 141 IDLLQSLADMDITFKALKETDIGRHVNQLRKHSS-NDVRKLVKHLVRKWKDIVDE 194
+DLL+ L + I L T +G VN LRK S +V + K L++ WK V E
Sbjct: 28 LDLLKVLGRLKINLTILTSTRVGMTVNNLRKTSKEEEVVTVAKSLIKTWKKFVPE 82
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 143 LLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
LL+ L ++ + L+ T IG VN +RKH S+ +V L K L++ WK ++D
Sbjct: 1 LLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLD 52
>gi|24638708|ref|NP_651936.1| mediator complex subunit 26, isoform A [Drosophila melanogaster]
gi|24638710|ref|NP_726610.1| mediator complex subunit 26, isoform B [Drosophila melanogaster]
gi|74867141|sp|Q9V4F9.2|MED26_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Mediator complex subunit 26; AltName:
Full=dARC70
gi|22759378|gb|AAF59314.2| mediator complex subunit 26, isoform A [Drosophila melanogaster]
gi|22759379|gb|AAF59315.2| mediator complex subunit 26, isoform B [Drosophila melanogaster]
Length = 1483
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q I E+ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QIEIQELTTHLSQALDQNYDVVNMDAVLCVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV----DEWVKLNQPGELASS 207
N+ + + K L++KW+++V L P +++SS
Sbjct: 63 KNEHLARRAKSLLKKWREMVGIQQTATENLAHPSQISSS 101
>gi|327305353|ref|XP_003237368.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
gi|326460366|gb|EGD85819.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
Length = 297
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 135 QSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
+S ++ LL+ L + T L+ T IG VN+L++H + DV +L +V KW+ V+
Sbjct: 21 ESSATIVSLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKAPDVARLSSEIVSKWRAEVN 80
Query: 194 EWVKLNQPG 202
+ K PG
Sbjct: 81 KQKKTASPG 89
>gi|300718977|ref|YP_003743780.1| cellulose synthase operon protein A [Erwinia billingiae Eb661]
gi|299064813|emb|CAX61933.1| Cellulose synthase operon protein A [Erwinia billingiae Eb661]
Length = 699
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 18 WTFIDTAILVASLDYATELKERRDKI-------VERLYATCIASRCRNCDFGNGVVDVNK 70
W IL+A++ A E K+ R I V YA+ I+SR D G VN
Sbjct: 530 WAMFSLIILMAAIAVARETKQTRKTIRIEVNIPVVLHYASGISSRTTTVDLSMGGAQVNA 589
Query: 71 EISRGQHDEVKAA----QQASPSTPHSVNGDDD 99
R ++DE++A Q + S P S+ G D+
Sbjct: 590 PDDRHENDEIEAIDLMLQSGTISIPVSIMGSDN 622
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 21/154 (13%)
Query: 142 DLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQP 201
+ L+++ ++++ L T +G+ + +L KH S+ + + L+ KWK +V + +
Sbjct: 36 EALKAMGAVEVSTSILLSTQVGKRLRKLTKHQSSKISGSAQQLLEKWKKVVADEAAIKSG 95
Query: 202 GELASSAMMDGDSPQQKIP-----QNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERK--- 253
S + ++P + P + +V + + +S +D N+ P K
Sbjct: 96 TSKEVSPTIKPETPGRTPPATVVKKEVKTEVKVYT------SKTSRADTKNAVPSPKVES 149
Query: 254 SKQAPLPRKEALSSRP-PQ------SASPAAPHS 280
+ +P PR E + R PQ SA+P APH+
Sbjct: 150 TNVSPSPRVETKNVRAMPQPHPAGKSATPLAPHT 183
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 123 ILEIKEHLED--PDQSEDALI--DLLQSLADMDITFKALKETDIGRHVNQLRKHSSND-V 177
++ IK+ LE ++ DA + D+L L + + + L +T IG VNQ RK D V
Sbjct: 7 VVRIKKKLEKMMSKETTDAAVALDMLNQLRKLPMNLQVLTKTKIGVTVNQFRKSVKEDEV 66
Query: 178 RKLVKHLVRKWKDIV 192
L K +++ WK +
Sbjct: 67 VNLAKSIIKGWKKFL 81
>gi|47210148|emb|CAF95030.1| unnamed protein product [Tetraodon nigroviridis]
Length = 524
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
+++++ L IT +AL+ET +G+ +N +RK + N+ L R+ K ++ W KL
Sbjct: 31 VMEVISFLEKYPITREALEETRLGKLINDVRKKTKNE------DLARRAKKLLRNWQKLI 84
Query: 200 QPGEL 204
+PG++
Sbjct: 85 EPGKV 89
>gi|326472154|gb|EGD96163.1| transcription elongation factor S-II [Trichophyton tonsurans CBS
112818]
gi|326476985|gb|EGE00995.1| transcription elongation factor S-II [Trichophyton equinum CBS
127.97]
Length = 297
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 135 QSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
+S ++ LL+ L + T L+ T IG VN+L++H + DV +L +V KW+ V+
Sbjct: 21 ESSATIVSLLKELQKGIQPTEDLLRSTKIGIIVNRLKQHKAPDVARLSSEIVSKWRAEVN 80
Query: 194 EWVKLNQPG 202
+ K PG
Sbjct: 81 KQKKTASPG 89
>gi|323450413|gb|EGB06294.1| hypothetical protein AURANDRAFT_29341 [Aureococcus anophagefferens]
Length = 275
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 142 DLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
D+L++L +T L E G V++LRKH V K L++KWK++
Sbjct: 24 DILKALTAAKVTVAMLHEFKCGAVVSKLRKHEDAGVSASAKALIKKWKELA 74
>gi|384250506|gb|EIE23985.1| hypothetical protein COCSUDRAFT_53176 [Coccomyxa subellipsoidea
C-169]
Length = 151
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVK 182
+LE K L++ + S ++ L+ L+ + ++ L++T + V +LRK S ++++++
Sbjct: 47 VLEAKAVLDNTESSPAQVLGSLRQLSCLLVSKADLEQTGVAFSVRKLRKSSHDEIQRIAS 106
Query: 183 HLVRKWKDIV 192
+L+ KWK +V
Sbjct: 107 NLIEKWKKLV 116
>gi|294893800|ref|XP_002774653.1| hypothetical protein Pmar_PMAR006280 [Perkinsus marinus ATCC 50983]
gi|239880046|gb|EER06469.1| hypothetical protein Pmar_PMAR006280 [Perkinsus marinus ATCC 50983]
Length = 362
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVDE 194
D ++ L+ L +++T LK T IG+ VN + K S + D++ L K LV KW+ +V E
Sbjct: 167 DDVLRALRGLEAVEVTMDDLKRTKIGKVVNTIMKTSVDPDIKALSKDLVCKWRKVVAE 224
>gi|226289438|gb|EEH44946.1| DNA damage response protein RcaA [Paracoccidioides brasiliensis
Pb18]
Length = 649
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 124 LEIKEH-----LEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
L+IK H P +++D L L SL D+D+ D HV Q +++++ +
Sbjct: 91 LKIKWHPIVLSFSFPCKAKDPLKHALSSLEDLDVKTIIPYIVDRTTHVVQSKRNTTKGLH 150
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELASSAMM-----DGDS----PQQKIPQNGNH--QV 227
L+ +K + V PG+L + D D+ P Q +P G Q
Sbjct: 151 ALINGKYIVYKSYIQAIVYATTPGDLEREESLCPLEEDYDAAWPDPTQHLPPRGKEPTQS 210
Query: 228 PDFAYSPNP 236
PD +Y PNP
Sbjct: 211 PDTSYQPNP 219
>gi|170034672|ref|XP_001845197.1| transcription elongation factor B polypeptide 3 [Culex
quinquefasciatus]
gi|167876068|gb|EDS39451.1| transcription elongation factor B polypeptide 3 [Culex
quinquefasciatus]
Length = 648
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
E L+ + L + ++ + L+ET IGR VN LRK+ +V K LV KWK +V
Sbjct: 22 ESRLLHCIAKLYRLPVSVQHLQETGIGRTVNGLRKYDG-EVGVAAKALVSKWKSMV 76
>gi|51092191|gb|AAT94509.1| LD05389p [Drosophila melanogaster]
Length = 623
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q I E+ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QIEIQELTTHLSQALDQNYDVVNMDAVLCVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV----DEWVKLNQPGELASS 207
N+ + + K L++KW+++V L P +++SS
Sbjct: 63 KNEHLARRAKSLLKKWREMVGIQQTATENLAHPSQISSS 101
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 138 DALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
D ++ LL+ L A++ T L+ + G + +LR H++ V L K +V+KW+D V+E
Sbjct: 23 DEVVSLLKKLQAEVVPTEDLLRSSKAGVAIGKLRTHTTPSVSNLAKEIVKKWRDAVEE 80
>gi|254504175|ref|ZP_05116326.1| hypothetical protein SADFL11_4214 [Labrenzia alexandrii DFL-11]
gi|222440246|gb|EEE46925.1| hypothetical protein SADFL11_4214 [Labrenzia alexandrii DFL-11]
Length = 827
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 255 KQAPLPRKEALSSRPPQSASPAAPHSVQRPREQ-KESRESTFDADSRLASARKRLQENYK 313
K PLP +S+ + AA H + R E+ KE+R++T D + + RKR +E +
Sbjct: 103 KGGPLPGGGFVSTYSDITERVAARHQLLRQMEELKEARQATLDMMEKAEANRKRAEELRE 162
Query: 314 REENAKRQRTIQVMDI-HEIPKPKNAFFG 341
+ E+A + + + + + HEI P N G
Sbjct: 163 KAESATKAKDMFLAAMSHEIRTPMNGVVG 191
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
A++++L++ ++T L+ET G V +LR H+S +V K +V+KWK V++
Sbjct: 25 AVLNILKT--QQNVTESILRETKAGLAVGKLRSHASKEVADNAKEIVKKWKSAVEK 78
>gi|195564322|ref|XP_002105679.1| GD24373 [Drosophila simulans]
gi|194201645|gb|EDX15221.1| GD24373 [Drosophila simulans]
Length = 249
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 15/101 (14%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q I E+ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QIEIQELTTHLSQALDQNYDVVNMDAVLCVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV------DEWVKLNQPGELASS 207
N+ + + K L++KW+++V E+ L P +++SS
Sbjct: 63 KNEHLARRAKSLLKKWREMVGIQQTATEY--LAHPSQISSS 101
>gi|291242179|ref|XP_002740987.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 528
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 148 ADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIV 192
A IT +AL+ET +G+ VN +RK S+N D+ K + L+R+W+ +
Sbjct: 38 APASITKEALEETRLGKLVNDIRKKSTNDDLSKRCRRLLRQWQKLC 83
>gi|156393336|ref|XP_001636284.1| predicted protein [Nematostella vectensis]
gi|156223386|gb|EDO44221.1| predicted protein [Nematostella vectensis]
Length = 861
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
+I+LLQ L D+ ++ LK+ + G+ V L K + +V+ L ++++W D+V
Sbjct: 178 VIELLQLLKDLPVSVDTLKQGNTGKLVRSLTKVDNKEVKDLSTSVLKQWMDMV------R 231
Query: 200 QPGELASSAMMDGDSPQQKI 219
+ A +GDSP+ I
Sbjct: 232 TQSDKADKPQKNGDSPESDI 251
>gi|226504570|ref|NP_001142427.1| uncharacterized protein LOC100274603 [Zea mays]
gi|194708770|gb|ACF88469.1| unknown [Zea mays]
Length = 147
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 30/40 (75%)
Query: 298 DSRLASARKRLQENYKREENAKRQRTIQVMDIHEIPKPKN 337
+++L +A+++LQE Y+ +NAK+QR+IQ++ +PK N
Sbjct: 80 NTKLEAAKRKLQEGYQEFDNAKKQRSIQMVHPQNLPKQAN 119
>gi|347971768|ref|XP_313648.5| AGAP004363-PA [Anopheles gambiae str. PEST]
gi|333469020|gb|EAA09112.5| AGAP004363-PA [Anopheles gambiae str. PEST]
Length = 668
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
++ + L + I+ + L++T IGR VN LRK+ +V K LV KWK +V
Sbjct: 25 IVHCIGKLYKLPISVRHLQDTGIGRTVNSLRKY-DGEVGVAAKALVTKWKAMV 76
>gi|325303004|tpg|DAA34536.1| TPA_inf: transcription elongation factor B polypeptide [Amblyomma
variegatum]
Length = 240
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 135 QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSND--VRKLVKHLVRKWKDIV 192
QS++ +++ L+ L + +T L+ET IGR VN L+K ND + + + ++ WK +V
Sbjct: 14 QSDEKVLETLRKLQKVPMTITLLQETGIGRTVNHLKK---NDGVIGETARSVIGAWKQVV 70
>gi|452821327|gb|EME28359.1| hypothetical protein Gasu_41980 [Galdieria sulphuraria]
Length = 443
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 115 LFDDEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKH-- 172
L D ++I + ++H ++ E ++ L+ L +T LK + G+ V +L K
Sbjct: 267 LSDQINEKIRQFEKHCDEVYSIEGQVLQSLKVLFQSRVTIAMLKNSRAGKPVVELEKSCG 326
Query: 173 -SSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMD 211
+S +R + K LVR+WK +V E + E A + M+
Sbjct: 327 PNSQAIRAMAKQLVRQWKKMVMESTPSKKDQETAETRTMN 366
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
+I+ L SL D++I LK+T IG VN+ K + +++ + K LV KWK+I
Sbjct: 87 IIEDLISLKDVEINKDILKQTKIGVTVNKFTKIKNEEIQNVAKDLVDKWKNI 138
>gi|154288118|ref|XP_001544854.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408495|gb|EDN04036.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 16/120 (13%)
Query: 139 ALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
LI LL+ L + T L+ T IG VN+L++H S DV +L +V KW+ V++ K
Sbjct: 91 TLISLLRELQKGVRPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQ-K 149
Query: 198 LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSD---KNNSEPERKS 254
+ G A+S DSP+ Q P+ SP G++ +D K+ P+++S
Sbjct: 150 VTVGGSPAAS-QRSSDSPK---------QTPNGTASPA-STGAAATDRLAKSTVPPDKRS 198
>gi|302683244|ref|XP_003031303.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
gi|300104995|gb|EFI96400.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
Length = 286
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 123 ILEIK---EHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
I+E+K + L+ P +++ L L + ++ L+E+ G V +LR HS+ +V +
Sbjct: 4 IVELKRLVKQLQSPSTAQELLGILTLLKKNWEVNETILRESKAGLAVGKLRTHSNKEVSQ 63
Query: 180 LVKHLVRKWKDIVD 193
K LV+KWK+ V+
Sbjct: 64 AAKDLVKKWKNDVE 77
>gi|195172582|ref|XP_002027076.1| GL18136 [Drosophila persimilis]
gi|194112854|gb|EDW34897.1| GL18136 [Drosophila persimilis]
Length = 591
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 12/82 (14%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I ++ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QNQIQQLTSHLSQALDQNYDVVNMDAVLSVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SNDVRKLVKHLVRKWKDIVDEW 195
N+ HL R+ K ++ W
Sbjct: 63 KNE------HLARRAKSLLKMW 78
>gi|312382353|gb|EFR27842.1| hypothetical protein AND_04985 [Anopheles darlingi]
Length = 694
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
++ + L + I+ + L++T IGR VN LRK+ +V K LV KWK +V
Sbjct: 25 IVHCIGKLYKLPISVRHLQDTGIGRTVNSLRKY-DGEVGTAAKALVTKWKAMV 76
>gi|195469389|ref|XP_002099620.1| GE14504 [Drosophila yakuba]
gi|194185721|gb|EDW99332.1| GE14504 [Drosophila yakuba]
Length = 1490
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 120 QKRILEIKEHLEDP-DQSEDAL-----IDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I E+ HL DQ+ D + + ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QIQIQELTTHLSQALDQNYDVVNMDTVLSVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV 192
N+ + + K L++KW+++V
Sbjct: 63 KNEHLARRAKSLLKKWREMV 82
>gi|195354427|ref|XP_002043699.1| GM26770 [Drosophila sechellia]
gi|194128887|gb|EDW50930.1| GM26770 [Drosophila sechellia]
Length = 1482
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q I E+ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QIEIQELTTHLSQALDQNYDVVNMDAVLYVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV 192
N+ + + K L++KW+++V
Sbjct: 63 KNEHLARRAKSLLKKWREMV 82
>gi|194746765|ref|XP_001953444.1| GF23399 [Drosophila ananassae]
gi|190629340|gb|EDV44757.1| GF23399 [Drosophila ananassae]
Length = 322
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I ++ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QYQIQQLTSHLSQALDQNYDVINMDAVLSVICALEGTKITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV 192
+N+ + + K L++KW+++V
Sbjct: 63 TNEHLARRAKSLLKKWREMV 82
>gi|432854667|ref|XP_004068014.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Oryzias latipes]
Length = 555
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+I+++ L IT + L+ET +G+ +N +RK + N D+ K K+L+R W+ +++
Sbjct: 28 VVIEVISFLETFPITKEVLEETRLGKLINDVRKKTRNADLAKRAKNLLRNWQKLIE 83
>gi|334328309|ref|XP_001363263.2| PREDICTED: transcription elongation factor B polypeptide 3
[Monodelphis domestica]
Length = 842
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 148 ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+D+ IT L ET +G+ VN LRKH V K LV +WK +V
Sbjct: 102 SDLPITVDILAETGVGKTVNGLRKH--EQVGGFAKDLVARWKKLV 144
>gi|317575580|ref|NP_001187468.1| uncharacterized protein c1orf83 [Ictalurus punctatus]
gi|308323086|gb|ADO28680.1| uncharacterized protein c1orf83 [Ictalurus punctatus]
Length = 211
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLR-KHSSNDVRKLV 181
I K LE P Q+++ +++ L L + + LK T IG VN LR KH DV+ L
Sbjct: 42 IERFKSILELPGQTKENMLNALTELDRKVPSREVLKSTRIGHTVNTLRKKHPDADVKSLA 101
Query: 182 KHLVRKWKDIVDE 194
+ + +W+ ++E
Sbjct: 102 RQVYTRWRTFIEE 114
>gi|410921800|ref|XP_003974371.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Takifugu rubripes]
Length = 529
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKL 198
+++++ L IT +AL+ET +G+ +N +RK + N+ L R+ K ++ W KL
Sbjct: 30 VVMEVISFLEKYPITKEALEETRLGKLINDVRKKTKNE------DLARRAKKLLRNWQKL 83
Query: 199 NQPGEL 204
+PG++
Sbjct: 84 IEPGKV 89
>gi|242049606|ref|XP_002462547.1| hypothetical protein SORBIDRAFT_02g027910 [Sorghum bicolor]
gi|241925924|gb|EER99068.1| hypothetical protein SORBIDRAFT_02g027910 [Sorghum bicolor]
Length = 283
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 57/269 (21%)
Query: 93 SVNGDDDIDIENDNDII--DPYGGLFDDEQKRILEIKEHLEDPDQSED--------ALID 142
SV G D IE + I D + L + RI+E+ ED D+ + A+ +
Sbjct: 15 SVFGQIDAAIEAAHPSISRDEFRSL----RGRIVEMLCDSEDDDERAEQLCLALDGAMAE 70
Query: 143 LLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPG 202
L +L ++ ++ + L D+ + V+ L +H S +R L + +VR W+ V+ +
Sbjct: 71 SLVTLLEVPVSSRVLVSGDLPKSVSALGQHESARIRSLTRGVVRGWRSAVESEL------ 124
Query: 203 ELASSAM-----MDGDSPQQKIPQNGNHQVPDFA------YSPNPHNGSSGSDKN-NSEP 250
E A +AM + P +K N VP A P S N +
Sbjct: 125 ESAKAAMEALNNLSHLMPPEKERLASNSHVPIAAGKDETRIKHTPAKFPSKRTPNITGKD 184
Query: 251 ERKSKQAPLPRKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQE 310
E + K P ++ P +P A S ESRE LA+ RK L+E
Sbjct: 185 ETQIKDTP--------AKFPCKRTPVAGSSCS------ESREV-------LATKRK-LRE 222
Query: 311 NYKREENAKRQRTIQVMD---IHEIPKPK 336
Y+ ENA+ QR +V++ + E PK K
Sbjct: 223 GYQEVENAQSQRKTRVIEEPKMLEQPKQK 251
>gi|449666366|ref|XP_002160168.2| PREDICTED: uncharacterized protein LOC100210641 [Hydra
magnipapillata]
Length = 773
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
L++L+ L M +T LK+ + G+ + Q+ K + D++K L+++WK+++
Sbjct: 98 VLLELIDVLKVMPVTIDLLKQGNTGKIIKQMTKLENIDIKKNAGSLIKQWKEMI 151
>gi|449667121|ref|XP_004206492.1| PREDICTED: uncharacterized protein LOC101236819 [Hydra
magnipapillata]
Length = 438
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 124 LEIKEHLE---DPD---QSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-D 176
LEIK L+ DP+ + + +++++ L + +T +AL+ T IGR +N +RK + N +
Sbjct: 6 LEIKARLDKAVDPEGNVLNMEVVLEVVSCLERLAMTSEALEVTRIGRTINTMRKKTQNKE 65
Query: 177 VRKLVKHLVRKWK 189
+ K K LV KW+
Sbjct: 66 LAKRAKKLVEKWR 78
>gi|240278909|gb|EER42415.1| transcription elongation factor S-II [Ajellomyces capsulatus H143]
gi|325090170|gb|EGC43480.1| transcription elongation factor S-II [Ajellomyces capsulatus H88]
Length = 306
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 16/120 (13%)
Query: 139 ALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
LI LL+ L + T L+ T IG VN+L++H S DV +L +V KW+ V++ K
Sbjct: 25 TLISLLRELQKGVRPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNKQ-K 83
Query: 198 LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSD---KNNSEPERKS 254
+ G A+S DSP+ + P+ SP G++ SD K+ P+++S
Sbjct: 84 VTVGGSPAAS-QRSSDSPK---------RTPNGTASP-ASTGAAASDRLAKSTVPPDKRS 132
>gi|125556592|gb|EAZ02198.1| hypothetical protein OsI_24293 [Oryza sativa Indica Group]
Length = 206
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV-DEWVKL 198
+++ L +L + K L TD+ + V LR H S VR L +VR W+ V DE +K
Sbjct: 68 MVEALLTLELVPAMPKMLASTDLAQDVGALRNHPSERVRSLAIGIVRGWRASVKDELLKA 127
Query: 199 NQPGELASSAM 209
E S AM
Sbjct: 128 AAAMEKLSQAM 138
>gi|193662067|ref|XP_001943463.1| PREDICTED: hypothetical protein LOC100158966 [Acyrthosiphon pisum]
Length = 336
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVDEWVK 197
+ +++ +L + +T + L+ T IG+ VN+LR+ + + + K K LV++W++++ +
Sbjct: 27 TVFEVISTLEQLPVTTEVLEATRIGKMVNELRRKTLDKQLAKRAKELVQRWRNLMINSAQ 86
Query: 198 LNQPGELASS 207
+ Q +L SS
Sbjct: 87 VIQQAKLPSS 96
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 132 DPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
D E ID + L + +K L T +G+H+ L KH ++ L+ WK I
Sbjct: 23 DGKHEESRCIDAFEQLKKFPVNYKILVNTQVGKHLKVLTKHPRLKIKAFAIDLIEIWKGI 82
Query: 192 VDEWVKLNQPG 202
+ + N+ G
Sbjct: 83 IIKETSKNKNG 93
>gi|149418245|ref|XP_001521771.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Ornithorhynchus anatinus]
Length = 748
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 148 ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+D+ IT L ET +G+ VN LRKH V K LV +WK +V
Sbjct: 34 SDLPITIDILVETGVGKTVNGLRKHEL--VGGFAKDLVARWKRLV 76
>gi|307108597|gb|EFN56837.1| hypothetical protein CHLNCDRAFT_144411 [Chlorella variabilis]
Length = 224
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 123 ILEIKEHLEDPDQSEDA-LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLV 181
++ + ED D +E +D L++L ++ K L ET G+ V L KHS D+
Sbjct: 13 VVAAAKKAEDGDTAEQGRAVDGLKALRKQRVSTKVLSETQAGKRVKALAKHSKQDIAAAA 72
Query: 182 KHLVRKWKDIVDE 194
+V WK+ V +
Sbjct: 73 SAVVAAWKEAVKQ 85
>gi|169606057|ref|XP_001796449.1| hypothetical protein SNOG_06061 [Phaeosphaeria nodorum SN15]
gi|111066005|gb|EAT87125.1| hypothetical protein SNOG_06061 [Phaeosphaeria nodorum SN15]
Length = 1914
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 143 LLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRK-----WKDIVDEWVK 197
+SL M F L I + + L + SN +++L+ V+K W IV+ +V+
Sbjct: 1505 FFESLEYMLDRFLDLLALCICQENDTLARIGSNCLQQLILQNVQKFGPTHWNQIVNAFVE 1564
Query: 198 LNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPE 251
L Q E + Q P NG H+ PD + S P S + S PE
Sbjct: 1565 LFQRTEATALFSAATSGSAQATPVNGFHETPDHSTSSPPGELSLQTPTEESRPE 1618
>gi|345482496|ref|XP_003424608.1| PREDICTED: hypothetical protein LOC100677867 [Nasonia vitripennis]
Length = 529
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 144 LQSLADMDITFKALKETDIGRHVNQLRKHSSNDV-RKLVKHLVRKWKDIV 192
+ +L IT + L+ T +GR+VN+LR+ + N V K K LVR+W++ +
Sbjct: 32 ITALEKTTITKEVLEITRLGRYVNELRRKTHNQVLAKRAKELVRRWRNAL 81
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
ID L+ L +T+ L T +G+ + L KH D++ + L+ WK +V E
Sbjct: 34 CIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVEDIKSVATDLLEIWKKVVIE 88
>gi|297604507|ref|NP_001055548.2| Os05g0414100 [Oryza sativa Japonica Group]
gi|255676367|dbj|BAF17462.2| Os05g0414100 [Oryza sativa Japonica Group]
Length = 198
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 3 LDDFRSILKTAG--VDVWTFIDTAILVASLDYATELKERRDKIVERLYATCIASRCRNCD 60
LD +R +L+ A + I+ AILVA+ D EL RRD+I E L+ A R C
Sbjct: 5 LDRWRELLRGAAGSAGICDVIENAILVAAADAPQELLRRRDRICEILFT---APRAPPCH 61
Query: 61 FGNG 64
G G
Sbjct: 62 HGCG 65
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
ID L+ L +T+ L T +G+ + L KH D++ + L+ WK +V E
Sbjct: 34 CIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVEDIKSVATDLLEIWKKVVIE 88
>gi|392562241|gb|EIW55422.1| hypothetical protein TRAVEDRAFT_131337 [Trametes versicolor
FP-101664 SS1]
Length = 1177
Score = 38.9 bits (89), Expect = 3.9, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 87 SPSTPHSVN---GDDDIDIENDNDIIDPYGGLFDD-EQKRILEIKEHLEDPDQSEDALID 142
SPS P ++ GD D + N ++ +FDD Q I +I H+ D S AL+
Sbjct: 55 SPSLPRKLDFTCGDHDPGVLARNVLL--LAMIFDDVTQTAIWDIYMHMYLDDDSHTALVV 112
Query: 143 LLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPG 202
+ L +T +A + G + +H+ D+R+L W VD V + P
Sbjct: 113 QCRKLLACSVTLEAWHASSYGAFLRVGTEHTLLDLRRL-------WSFYVDSTVPVGSPR 165
Query: 203 ELASSAMMDG 212
L++ M+D
Sbjct: 166 ALSTRKMIDA 175
>gi|348500500|ref|XP_003437811.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Oreochromis niloticus]
Length = 605
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRKWKDIVD 193
+++++ L IT +AL+ET +G+ +N +RK + + D+ K K L+R W+ +++
Sbjct: 30 VVLEVIACLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRNWQKLIE 85
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 134 DQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+Q+ED ++ +LQ L A++ + + LK + G V +LR S V L K LV+KWK+++
Sbjct: 20 NQTED-VVRILQKLQAEVIPSEELLKASKAGIAVGKLRSVPSPGVANLAKDLVKKWKEVI 78
Query: 193 DE 194
+E
Sbjct: 79 EE 80
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
+ID L L D++I LK+T IG VN+ K +++++ + K LV KWK+I
Sbjct: 57 IIDDLILLNDVEINKDILKQTKIGVTVNKFTKIKNDEIQSIAKDLVDKWKNI 108
>gi|198462224|ref|XP_001352375.2| GA14731 [Drosophila pseudoobscura pseudoobscura]
gi|221222461|sp|Q29CV2.2|MED26_DROPS RecName: Full=Mediator of RNA polymerase II transcription subunit
26; AltName: Full=Mediator complex subunit 26
gi|198142784|gb|EAL29261.2| GA14731 [Drosophila pseudoobscura pseudoobscura]
Length = 1602
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I ++ HL DQ+ D A++ ++ +L IT + L+ T + +++NQLR+ +
Sbjct: 3 QNQIQQLTSHLSQALDQNYDVVNMDAVLSVICALEGTTITKEQLEATRLAKYINQLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV 192
N+ + + K L++ W+++V
Sbjct: 63 KNEHLARRAKSLLKMWREMV 82
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 137 EDALIDLLQS----LADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
+DA I+++++ L D++I LK+T IG VN+ K ++ ++ + K LV KWK+I
Sbjct: 35 DDATIEVIKNDLILLKDVEINKDILKQTKIGVTVNKFTKINNESIKNISKELVDKWKNI 93
>gi|328873555|gb|EGG21922.1| putative mediator complex subunit 26 [Dictyostelium fasciculatum]
Length = 897
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 140 LIDLLQSLADMDITFKAL-KETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
+I +L++L + IT + L KE+ +G+ V L+KH + VR L L R W ++V
Sbjct: 307 IIAILKALKQLPITLEHLQKESGVGKIVRGLKKHDNASVRDLATDLERIWMNLV 360
>gi|294883920|ref|XP_002771106.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
gi|239874344|gb|EER02922.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
Length = 308
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 118 DEQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRK--HSSN 175
+++ +L +K+ L +PD+ A+ID SL+ +++ + LKET IG+ +N+ ++
Sbjct: 7 NDKATVLTLKKRLSEPDRDLMAIID---SLSSINMDKQLLKETMIGKALNKAANADETTP 63
Query: 176 DVRKLVKHLVRKWKDIVD 193
+K K+L+ WK +D
Sbjct: 64 RAKKAAKNLMGAWKKKID 81
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVK 197
D +D ++ L + +T L T +G+ + L KH +D++ + L+ WK +V E K
Sbjct: 29 DRCLDAMRRLRGLRVTTDVLVSTQVGKRLRYLTKHPHSDIQSMATDLLGYWKKVVIEEGK 88
Query: 198 LNQPGELASSA 208
N E S
Sbjct: 89 KNGTTENVGST 99
>gi|20043008|gb|AAM08816.1|AC090486_26 Hypothetical protein [Oryza sativa Japonica Group]
gi|20303621|gb|AAM19048.1|AC099774_10 putative membrane spanning protein [Oryza sativa Japonica Group]
gi|31431176|gb|AAP52991.1| hypothetical protein LOC_Os10g18010 [Oryza sativa Japonica Group]
gi|125574378|gb|EAZ15662.1| hypothetical protein OsJ_31075 [Oryza sativa Japonica Group]
Length = 274
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 269 PPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTIQVMD 328
PP + PA S ++ K +++LA A+++LQE Y+ +AK+QR IQV+D
Sbjct: 178 PPAAQKPAPTASPKKTASNKREEAPALVDEAKLAVAKRKLQEGYEDAASAKKQRMIQVID 237
>gi|409082479|gb|EKM82837.1| hypothetical protein AGABI1DRAFT_111399 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 582
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 215 PQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSAS 274
P++ +P+ G + P N N +SGS P Q PLP + S+ QS
Sbjct: 81 PRKVLPEGGK-EFPLL----NGINSASGSSPT---PPTSGPQIPLPERNNPSASGNQSLG 132
Query: 275 PAAPH-SVQR--PREQKESRESTFDADSRLASARKRLQENYKREENAKRQR 322
PAAP S+QR P +E D DSRL +A R E+ + +E ++ R
Sbjct: 133 PAAPSTSIQRASPPNATGDKEGDSDTDSRLITAIYRPDEDGEWKEKLRQSR 183
>gi|108707643|gb|ABF95438.1| expressed protein [Oryza sativa Japonica Group]
gi|125585921|gb|EAZ26585.1| hypothetical protein OsJ_10482 [Oryza sativa Japonica Group]
Length = 534
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV-DEW 195
+D + + L +L + +T + L TD+ V LR+H S +R L +VR W+ V E
Sbjct: 66 DDVMAESLLTLRLVPVTARTLATTDLAGIVGALRRHESERIRGLATDIVRGWRVAVRREL 125
Query: 196 VKLN 199
V++
Sbjct: 126 VRIG 129
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 31/130 (23%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
+++ L L +D+T + L +T IG V +LR H +R LV KWK +
Sbjct: 111 VVEALTILDRVDMTRELLAKTRIGVSVGKLRTHPDVQIRSRCTQLVHKWKAGISGSCSTK 170
Query: 200 QPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPL 259
G L+ + QNG+ Q H G+S +DK
Sbjct: 171 DSGTLS------------RPGQNGSGQ-------GKSHTGTSANDKATD----------- 200
Query: 260 PRKEALSSRP 269
+K LSS+P
Sbjct: 201 -KKHGLSSQP 209
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 137 EDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
E +I LL+ L AD++ T + L+ + G V +LR++++ V L K +V++WK+ V+E
Sbjct: 36 EQDIIRLLKKLKADVEPTEELLRTSRAGIAVGKLRQNATPGVSSLAKEIVKQWKEAVEE 94
>gi|426200312|gb|EKV50236.1| hypothetical protein AGABI2DRAFT_183365 [Agaricus bisporus var.
bisporus H97]
Length = 582
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 215 PQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSAS 274
P++ +P+ G + P N N +SGS P Q PLP + S+ QS
Sbjct: 81 PRKVLPEGGK-EFPLL----NGINSASGSSPT---PPTSGPQIPLPERNNPSASGNQSLG 132
Query: 275 PAAPH-SVQR--PREQKESRESTFDADSRLASARKRLQENYKREENAKRQR 322
PAAP S+QR P +E D DSRL +A R E+ + +E ++ R
Sbjct: 133 PAAPSTSIQRASPPNATGDKEGDSDTDSRLITAIYRPDEDGEWKEKLRQSR 183
>gi|403215573|emb|CCK70072.1| hypothetical protein KNAG_0D03260 [Kazachstania naganishii CBS
8797]
Length = 309
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 121 KRILEIKEHLEDPDQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
K +L + + L E ++ LL L + + T K L+ET +G VN+ +K ++++ K
Sbjct: 4 KEVLAVVKALNKQRDDEQQVLLLLGKLESGVSPTEKLLRETKVGVEVNKFKKSKNDEIAK 63
Query: 180 LVKHLVRKWKDIVDE 194
V+ ++ WKD +++
Sbjct: 64 AVRRIISSWKDAINK 78
>gi|444707467|gb|ELW48742.1| Serine/threonine-protein phosphatase with EF-hands 1 [Tupaia
chinensis]
Length = 287
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 78 DEVKAAQQASPS--TPHSVNGDDDIDIENDNDIIDPYGGLFDDEQKRILEIKEHLEDPDQ 135
DE + Q PS P+ NGD +N +I+ LF ++QK +L LE +
Sbjct: 43 DEQRQMQNGLPSESNPYIFNGDFVDRGKNSMEILMILFLLFYEKQKLVL-----LEGSRR 97
Query: 136 SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEW 195
+ ++S A + LKE I R + +R S+DVRK K + +W I++
Sbjct: 98 -----VSAIESSA-----IRILKERMISRKTDLIRAFQSHDVRKTGKLSMAQWALIMENV 147
Query: 196 VKLNQPGELASSAMMDGDSPQQKIPQNGN 224
+ LN P S +++ I +NGN
Sbjct: 148 LGLNLPWRTLGSHLVN-------IDKNGN 169
>gi|324513486|gb|ADY45541.1| Transcription elongation factor B polypeptide 3 [Ascaris suum]
Length = 435
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 136 SEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDI 191
+E+ + L+ L +++T L ET IG+ VNQLR H L +V KWKDI
Sbjct: 20 NEEKMRHALRRLDSINMTLDLLSETGIGKAVNQLRNHEQYGDEAL--RIVNKWKDI 73
>gi|299472666|emb|CBN78318.1| hypothetical protein (Partial) [Ectocarpus siliculosus]
Length = 668
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 119 EQKRILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVR 178
E++ ++ IK L + +S + + LL + +T+ +L ++D G+ + L KH+ + +R
Sbjct: 148 ERRGLMFIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSGIR 207
Query: 179 KLVKHLVRKWKDIVDEWVKLNQPGELA 205
K K ++ W+ + ++ GE+A
Sbjct: 208 KQAKAVISHWRTAL-----VSDKGEIA 229
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 139 ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
++++L++ ++T L+ET G V +LR H+S +V K +V+KWK V++
Sbjct: 25 GVLNILKT--QQNVTESILRETKAGLAVGKLRSHASKEVADNAKEIVKKWKSAVEK 78
>gi|213406231|ref|XP_002173887.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
gi|212001934|gb|EEB07594.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
Length = 296
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 123 ILEIKEHLEDP--DQSEDALIDLLQSL-ADMDITFKALKETDIGRHVNQLRKHSSNDVRK 179
I +K LE D++ +A++ ++ +L A + T + LKET +G V +LR HS+ V +
Sbjct: 6 IRSVKSSLEKSIQDKNIEAILRIMGTLKARVVATEELLKETRLGLVVGKLRSHSNEKVSE 65
Query: 180 LVKHLVRKWK 189
+ +V+KWK
Sbjct: 66 QAREIVKKWK 75
>gi|432911927|ref|XP_004078784.1| PREDICTED: mediator of RNA polymerase II transcription subunit
26-like [Oryzias latipes]
Length = 592
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
+++++ L IT +AL+ET +G+ +N +RK + ++ L ++ K ++ W KL
Sbjct: 31 VLEVINCLEKYPITKEALEETRLGKLINDIRKKTKDE------DLAKRAKKLLKNWQKLI 84
Query: 200 QPGELASSAM 209
+PG + + ++
Sbjct: 85 EPGPVVAPSV 94
>gi|186510768|ref|NP_190388.2| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|186510770|ref|NP_850669.2| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|332644839|gb|AEE78360.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|332644840|gb|AEE78361.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
Length = 1613
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 145 QSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
++L + + AL+ +IG+ VN LR H ++++ K + LV WK V+
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVE 410
>gi|4678323|emb|CAB41134.1| putative protein [Arabidopsis thaliana]
Length = 1613
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 145 QSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
++L + + AL+ +IG+ VN LR H ++++ K + LV WK V+
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVE 410
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
ED ++ LQ++ + +T L T +G+ + +L KHS +R + ++ WK
Sbjct: 31 EDRCVEALQAMRSLRVTTSLLMSTQVGKQLRKLTKHSRPKIRSIAVDILEDWK 83
>gi|297819422|ref|XP_002877594.1| hypothetical protein ARALYDRAFT_485166 [Arabidopsis lyrata subsp.
lyrata]
gi|297323432|gb|EFH53853.1| hypothetical protein ARALYDRAFT_485166 [Arabidopsis lyrata subsp.
lyrata]
Length = 1613
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 145 QSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
++L + + AL+ +IG+ VN LR H ++++ K + LV WK V+
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVE 410
>gi|15228325|ref|NP_190389.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
gi|4678322|emb|CAB41133.1| putative protein [Arabidopsis thaliana]
gi|332644841|gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana]
Length = 1611
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 145 QSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
++L + + AL+ +IG+ VN LR H ++++ K + LV WK V+
Sbjct: 362 RALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVE 410
>gi|307219202|ref|NP_001182523.1| uncharacterized protein LOC424657 [Gallus gallus]
Length = 208
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 127 KEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
K LE P Q + L++ L L + + L T IG VN++RKHS DV L K +
Sbjct: 46 KAMLELPGQPRENLMEALGELKKKIPSKEVLLSTKIGHTVNRMRKHSDPDVAGLAKDVYT 105
Query: 187 KWK 189
+W+
Sbjct: 106 EWR 108
>gi|242007186|ref|XP_002424423.1| transcription elongation factor B polypeptide, putative [Pediculus
humanus corporis]
gi|212507823|gb|EEB11685.1| transcription elongation factor B polypeptide, putative [Pediculus
humanus corporis]
Length = 639
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 137 EDALIDLLQSLADMDITFKALKETDIGRHVNQLRK-HSSNDVRKLVKHLVRKWKDIV 192
ED L+ + L + + L+ET +GR VN LRK + K LV KWK +V
Sbjct: 31 EDRLLHCINKLYKLPVNVNHLQETGVGRTVNSLRKIEGEKGLGDAAKALVAKWKTMV 87
>gi|296083142|emb|CBI22778.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 131 EDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
E+ E+ L+ L++L + + AL+ ++G+ VN L H +++++K + LV WK
Sbjct: 84 ENDKSVEEFLLAPLRALDKLPVNLHALQTCNVGKSVNHLCSHKNSEIKKKARSLVDTWK 142
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 20/89 (22%)
Query: 121 KRILEIKE-------HLEDPDQS-------------EDALIDLLQSLADMDITFKALKET 160
+RILE+K+ LED Q D +++ L L +D++ + L +T
Sbjct: 72 ERILELKKVIDHAKAALEDGQQGGAPGAAVTPLLGVRDDVLEALTVLDRVDMSRELLAKT 131
Query: 161 DIGRHVNQLRKHSSNDVRKLVKHLVRKWK 189
IG V +LR H + +R LV KWK
Sbjct: 132 RIGVSVGKLRTHPDSQIRSRCTQLVHKWK 160
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
+D L+ L +T AL T IGR + L KH + ++ L+ WK +V E K N
Sbjct: 39 CVDALRRLRGARVTTAALVSTQIGRRIRYLTKHPHSSIKTTASDLLGHWKKVVIEEDKKN 98
Query: 200 ---QPGELASSAM 209
Q G+ +S+ +
Sbjct: 99 GALQNGKSSSTVV 111
>gi|195450773|ref|XP_002072626.1| GK13589 [Drosophila willistoni]
gi|194168711|gb|EDW83612.1| GK13589 [Drosophila willistoni]
Length = 1641
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 120 QKRILEIKEHLEDP-DQSED-----ALIDLLQSLADMDITFKALKETDIGRHVNQLRKHS 173
Q +I ++ HL DQ+ D A++ ++ +L IT + L+ T + +++N LR+ +
Sbjct: 3 QNQIQQLTSHLSQALDQNYDVVNLEAVLSVICALEGTTITKEQLEATRLAKYINHLRRRT 62
Query: 174 SND-VRKLVKHLVRKWKDIV 192
N+ + + K L+++W+++V
Sbjct: 63 KNEQLARRAKSLLKRWREMV 82
>gi|323650182|gb|ADX97177.1| transcription elongation factor a protein 3 [Perca flavescens]
Length = 66
Score = 37.7 bits (86), Expect = 7.6, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 138 DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN-DVRKLVKHLVRK 187
+ +DLL+ L ++T K L+ET IG VN +RKH ++ +V L K L+++
Sbjct: 13 EGAMDLLRELKGFNMTLKLLQETRIGMSVNGIRKHCTDEEVIALAKILIKR 63
>gi|357117475|ref|XP_003560493.1| PREDICTED: uncharacterized protein LOC100840985 [Brachypodium
distachyon]
Length = 314
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 33/180 (18%)
Query: 157 LKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWK-DIVDEWVKLNQPGELASSAMMDGDSP 215
L T++ + V LRKH S VR L + + W+ + D V++ A MD
Sbjct: 85 LASTELAKAVAALRKHDSERVRVLARGIFSGWRASLQDNLVRVR--------AAMD---- 132
Query: 216 QQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEALSSRPPQSASP 275
K+ Q P P+N S +D+ + + P +K ++ PP P
Sbjct: 133 --KLDQ-----------IPLPNNNKSVADQQLASAK---ILEPSAKKTVKTTEPPL---P 173
Query: 276 AAPHSVQRPREQKESRESTFDADSRLASARKR-LQENYKREENAKRQRTIQVMDIHEIPK 334
V + +D ++ A KR E Y+ E AKRQR IQV++ E+ K
Sbjct: 174 PLRKKVSTAVGIARGDRAGLCSDDKIMDATKRKFHEGYQEAEKAKRQRRIQVVEAPEMLK 233
>gi|242083430|ref|XP_002442140.1| hypothetical protein SORBIDRAFT_08g014920 [Sorghum bicolor]
gi|241942833|gb|EES15978.1| hypothetical protein SORBIDRAFT_08g014920 [Sorghum bicolor]
Length = 588
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 133 PDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
P + + +L++LA + I AL+ IG+ VN+LR H + +++K + L+ K +
Sbjct: 513 PIGPGEFFLAMLRALARLPINLSALQRCSIGKSVNRLRGHKNVEIQKKSRLLIEDGKRRI 572
Query: 193 DEWVKLNQ 200
D +KL +
Sbjct: 573 DAEMKLGR 580
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
+D L+ L +T AL T IGR + L KH + ++ L+ WK +V E K N
Sbjct: 45 CVDALRRLRGARVTTAALVSTQIGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEEDKKN 104
Query: 200 ---QPGELASSAM 209
Q G+ +S+ +
Sbjct: 105 GALQNGKSSSTVV 117
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 131 EDPDQSEDALIDLLQS----LADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
E ++ ++A I+++++ L D++I LK+T IG VN+ K ++ ++ + K LV
Sbjct: 29 EGIEEIDNATIEVIKNDLILLKDVEINKDILKQTKIGVTVNKFTKINNESIKNISKELVD 88
Query: 187 KWKDI 191
KWK+I
Sbjct: 89 KWKNI 93
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLN 199
+D L+ L +T AL T IGR + L KH + ++ L+ WK +V E K N
Sbjct: 39 CVDALRRLRGARVTTAALVSTQIGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEEDKKN 98
Query: 200 ---QPGELASSAM 209
Q G+ +S+ +
Sbjct: 99 GALQNGKSSSTVV 111
>gi|308493257|ref|XP_003108818.1| CRE-MDT-26 protein [Caenorhabditis remanei]
gi|308247375|gb|EFO91327.1| CRE-MDT-26 protein [Caenorhabditis remanei]
Length = 565
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 125 EIKEHLEDPDQSEDALI--DLLQSLADMDITFKALKETDIGRHVNQLRKHSSN---DVRK 179
E+K+ L+ +++D + LL + + + + L+ET IG VNQLRK + +
Sbjct: 29 ELKKRLQTAAENDDQTLCESLLNEVRPLVTSREILEETRIGFVVNQLRKQYFKKWPSLLR 88
Query: 180 LVKHLVRKWKDIVDEWVKLNQPG 202
+ + +++ W DIV + VK Q G
Sbjct: 89 ISRDVIKSWSDIVCDEVKRPQSG 111
>gi|443734237|gb|ELU18302.1| hypothetical protein CAPTEDRAFT_220355 [Capitella teleta]
Length = 855
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 140 LIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIV 192
++ + + L + I F +L+ T IG+ VN RKH ++ + + LV KWK+++
Sbjct: 165 ILKVFRKLNKLAINFNSLQNTGIGKTVNSYRKH-EGELGEKARDLVLKWKEMI 216
>gi|323447332|gb|EGB03258.1| hypothetical protein AURANDRAFT_68163 [Aureococcus anophagefferens]
Length = 655
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 25/130 (19%)
Query: 122 RILEIKEH-LEDPDQSE-DALIDLLQSLADMDITFKALKETDIGRHVNQLRKHSSN---- 175
R+ ++ H LED +S+ D + D L L M+I L + +GR V+ L K
Sbjct: 399 RVKALEAHVLEDGARSDWDMVCDWLYELRYMNICIDDLMGSSLGRTVSGLEKVDEKVDDE 458
Query: 176 DVRKLVKHLVRKWKDIVDEWVKLNQPGELASSAMMDGDSPQQKIPQNGNHQVPDFAYSPN 235
V K KHLVRKWK +LA+ A G + ++ + + V DF
Sbjct: 459 PVAKRAKHLVRKWK-------------KLAARAQASGGAAPVEVDVSLANYVRDF----- 500
Query: 236 PHNGSSGSDK 245
H+G + K
Sbjct: 501 -HDGGMATRK 509
>gi|327349505|gb|EGE78362.1| transcription elongation factor S-II [Ajellomyces dermatitidis ATCC
18188]
Length = 373
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 135 QSEDALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVD 193
++ LI LL+ L + T L+ T IG VN+L++H S DV +L +V KW+ V+
Sbjct: 91 ETSATLISLLRELQKGVRPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVN 150
Query: 194 E 194
+
Sbjct: 151 K 151
>gi|308322525|gb|ADO28400.1| uncharacterized protein c1orf83 [Ictalurus furcatus]
Length = 211
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 123 ILEIKEHLEDPDQSEDALIDLLQSLADMDITFKALKETDIGRHVNQLRK-HSSNDVRKLV 181
I K LE P Q+++ +++ L L + + LK T IG VN LRK H +V+ L
Sbjct: 42 IERFKSILELPGQTKENMLNALTELDRKVPSREVLKSTRIGHTVNTLRKEHPDAEVKSLA 101
Query: 182 KHLVRKWKDIVDE 194
+ + +W+ ++E
Sbjct: 102 RQVYTRWRTFIEE 114
>gi|225683287|gb|EEH21571.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb03]
gi|226288233|gb|EEH43745.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb18]
Length = 306
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 139 ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
LI LL+ L + T L+ T IG VN+L++H S DV +L +V KW+ V++
Sbjct: 25 TLISLLKELQKGVQPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNK 81
>gi|68061519|ref|XP_672759.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490088|emb|CAI02261.1| hypothetical protein PB300631.00.0 [Plasmodium berghei]
Length = 263
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 131 EDPDQSEDALIDLLQS----LADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVR 186
E ++ ++A I+++++ L D++I LK+T IG VN+ K ++ ++ + K LV
Sbjct: 29 EGIEEIDNATIEVIKNDLILLKDVEINKDILKQTKIGVTVNKFTKINNESIKNISKELVD 88
Query: 187 KWKDI 191
KWK+I
Sbjct: 89 KWKNI 93
>gi|295672377|ref|XP_002796735.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283715|gb|EEH39281.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 306
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 139 ALIDLLQSLAD-MDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
LI LL+ L + T L+ T IG VN+L++H S DV +L +V KW+ V++
Sbjct: 25 TLISLLKELQKGVQPTEDLLRSTKIGIIVNKLKQHKSPDVARLSSEIVSKWRSEVNK 81
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,891,628,294
Number of Sequences: 23463169
Number of extensions: 265376355
Number of successful extensions: 1065106
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 1598
Number of HSP's that attempted gapping in prelim test: 1061207
Number of HSP's gapped (non-prelim): 4706
length of query: 353
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 210
effective length of database: 9,003,962,200
effective search space: 1890832062000
effective search space used: 1890832062000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)