Query 018593
Match_columns 353
No_of_seqs 154 out of 1425
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 03:02:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018593.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018593hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.7 1.3E-14 4.5E-19 127.2 25.9 208 93-331 53-282 (306)
2 4asc_A Kelch repeat and BTB do 99.7 4E-14 1.4E-18 124.6 28.5 193 108-329 68-285 (315)
3 2woz_A Kelch repeat and BTB do 99.7 6.5E-14 2.2E-18 123.5 29.6 222 76-327 36-293 (318)
4 1zgk_A Kelch-like ECH-associat 99.7 3.6E-14 1.2E-18 124.5 24.1 193 107-331 90-297 (308)
5 2vpj_A Kelch-like protein 12; 99.6 8E-14 2.7E-18 121.8 24.7 208 92-331 59-288 (301)
6 2xn4_A Kelch-like protein 2; s 99.6 9.4E-14 3.2E-18 121.4 23.0 204 93-328 59-283 (302)
7 3ii7_A Kelch-like protein 7; p 99.6 1.3E-13 4.3E-18 120.9 21.2 193 106-331 23-235 (306)
8 2vpj_A Kelch-like protein 12; 99.6 7.1E-13 2.4E-17 115.8 22.1 194 106-331 30-241 (301)
9 2xn4_A Kelch-like protein 2; s 99.6 5E-13 1.7E-17 116.8 20.4 193 107-331 30-239 (302)
10 1zgk_A Kelch-like ECH-associat 99.5 1.9E-13 6.3E-18 120.0 17.4 198 106-331 38-250 (308)
11 2uvk_A YJHT; unknown function, 99.5 7E-13 2.4E-17 118.7 19.3 216 93-331 17-304 (357)
12 4asc_A Kelch repeat and BTB do 99.5 1.6E-12 5.6E-17 114.3 20.8 198 107-331 13-231 (315)
13 2woz_A Kelch repeat and BTB do 99.5 3.6E-12 1.2E-16 112.3 18.6 206 96-331 16-241 (318)
14 2uvk_A YJHT; unknown function, 99.4 5.6E-11 1.9E-15 106.3 23.9 200 107-331 86-352 (357)
15 2zwa_A Leucine carboxyl methyl 99.3 4.9E-10 1.7E-14 108.8 20.7 206 94-327 396-641 (695)
16 1fs1_A SKP2 F-BOX, cyclin A/CD 99.2 2.6E-11 8.9E-16 76.0 4.1 41 1-41 9-49 (53)
17 2e31_A FBS1, F-box only protei 99.1 8.2E-11 2.8E-15 100.2 4.7 48 1-48 51-99 (297)
18 2ovr_B FBW7, F-BOX/WD repeat p 99.0 6.8E-07 2.3E-11 81.9 28.4 231 1-272 19-268 (445)
19 3v7d_B Cell division control p 99.0 4.6E-06 1.6E-10 76.6 33.5 41 2-42 16-57 (464)
20 1k3i_A Galactose oxidase precu 99.0 7.9E-09 2.7E-13 100.0 15.0 217 93-331 251-507 (656)
21 1p22_A F-BOX/WD-repeat protein 98.8 6.3E-07 2.2E-11 82.0 22.4 43 2-44 12-58 (435)
22 2zwa_A Leucine carboxyl methyl 98.8 8.4E-08 2.9E-12 93.2 16.6 162 154-330 399-592 (695)
23 1k3i_A Galactose oxidase precu 98.8 8.6E-08 2.9E-12 92.7 14.4 192 109-328 168-385 (656)
24 3l2o_B F-box only protein 4; s 98.1 1.5E-06 5.1E-11 73.2 2.7 48 2-49 6-53 (312)
25 2ast_B S-phase kinase-associat 97.6 2.4E-05 8.2E-10 68.8 3.0 39 1-39 9-47 (336)
26 2p1m_B Transport inhibitor res 97.2 0.00015 5.3E-09 68.8 2.9 34 1-34 6-40 (594)
27 2z2n_A Virginiamycin B lyase; 96.9 0.12 4E-06 43.5 18.9 189 93-325 107-299 (299)
28 3ogk_B Coronatine-insensitive 96.7 0.00061 2.1E-08 64.7 2.5 32 3-34 15-47 (592)
29 3g4e_A Regucalcin; six bladed 96.4 0.36 1.2E-05 40.9 22.4 203 92-331 21-239 (297)
30 3dsm_A Uncharacterized protein 96.4 0.41 1.4E-05 41.3 22.5 194 94-325 52-257 (328)
31 3dsm_A Uncharacterized protein 95.4 1.1 3.9E-05 38.5 24.4 201 95-330 2-221 (328)
32 1q7f_A NHL, brain tumor CG1071 95.2 1.2 4E-05 37.1 21.9 202 93-328 38-245 (286)
33 3e5z_A Putative gluconolactona 95.1 1.3 4.3E-05 37.2 22.4 185 104-327 47-252 (296)
34 3mbr_X Glutamine cyclotransfer 94.9 1.3 4.5E-05 36.4 16.1 113 205-331 27-143 (243)
35 2qc5_A Streptogramin B lactona 94.7 1.6 5.5E-05 36.3 18.2 184 94-320 113-299 (300)
36 1q7f_A NHL, brain tumor CG1071 94.3 2 6.9E-05 35.7 20.0 191 93-321 86-280 (286)
37 2dg1_A DRP35, lactonase; beta 94.1 2.5 8.4E-05 36.0 19.4 202 93-327 53-269 (333)
38 3jro_A Fusion protein of prote 94.1 3.9 0.00013 39.7 18.7 142 171-323 76-240 (753)
39 3nol_A Glutamine cyclotransfer 94.0 1.5 5.1E-05 36.5 13.3 111 206-330 50-164 (262)
40 3u4y_A Uncharacterized protein 93.7 2.8 9.6E-05 35.5 20.8 189 95-324 9-210 (331)
41 3u4y_A Uncharacterized protein 93.7 2.8 9.6E-05 35.5 19.9 117 208-333 186-316 (331)
42 3hfq_A Uncharacterized protein 93.6 3.2 0.00011 35.5 22.8 215 92-332 47-283 (347)
43 3v9f_A Two-component system se 93.5 5.9 0.0002 38.6 21.8 147 172-329 469-619 (781)
44 3q7m_A Lipoprotein YFGL, BAMB; 93.5 3.5 0.00012 35.8 19.4 193 91-327 99-302 (376)
45 3ei3_B DNA damage-binding prot 92.7 4.6 0.00016 35.0 20.1 187 105-323 94-284 (383)
46 2iwa_A Glutamine cyclotransfer 92.6 3.9 0.00014 34.1 15.0 110 209-331 32-145 (266)
47 4gga_A P55CDC, cell division c 92.4 5.6 0.00019 35.2 20.1 204 90-329 110-318 (420)
48 1l0q_A Surface layer protein; 92.4 5.1 0.00018 34.8 24.7 189 97-329 3-197 (391)
49 4aez_A CDC20, WD repeat-contai 92.3 5.4 0.00018 35.0 20.8 185 105-328 111-300 (401)
50 3hfq_A Uncharacterized protein 92.3 4.8 0.00016 34.4 24.2 152 171-329 161-327 (347)
51 3bws_A Protein LP49; two-domai 92.3 5.6 0.00019 35.1 21.0 193 93-329 178-398 (433)
52 3nok_A Glutaminyl cyclase; bet 92.2 2.9 9.8E-05 34.9 12.3 110 206-330 62-173 (268)
53 3dwl_C Actin-related protein 2 92.1 1.6 5.3E-05 37.9 11.5 196 95-324 22-239 (377)
54 4e54_B DNA damage-binding prot 92.1 4.5 0.00015 36.1 14.8 185 105-323 140-329 (435)
55 3e5z_A Putative gluconolactona 92.0 3.7 0.00013 34.3 13.5 110 208-327 38-167 (296)
56 3jrp_A Fusion protein of prote 91.9 5.5 0.00019 34.1 22.3 142 171-323 78-242 (379)
57 3scy_A Hypothetical bacterial 91.7 5.9 0.0002 34.0 22.0 116 208-328 221-346 (361)
58 3q7m_A Lipoprotein YFGL, BAMB; 91.6 6.2 0.00021 34.2 21.7 136 172-330 198-346 (376)
59 1nir_A Nitrite reductase; hemo 91.5 8.7 0.0003 35.6 17.7 115 208-325 334-462 (543)
60 4g56_B MGC81050 protein; prote 91.4 6.5 0.00022 34.0 14.8 196 94-327 104-307 (357)
61 1pjx_A Dfpase, DIISOPROPYLFLUO 91.3 5.8 0.0002 33.1 17.6 187 106-324 45-259 (314)
62 1ri6_A Putative isomerase YBHE 91.2 6.1 0.00021 33.3 26.4 153 171-332 150-321 (343)
63 2qc5_A Streptogramin B lactona 90.8 6.1 0.00021 32.6 22.9 194 90-327 25-223 (300)
64 4a2l_A BT_4663, two-component 90.7 13 0.00044 36.2 20.3 144 173-324 378-529 (795)
65 2z2n_A Virginiamycin B lyase; 90.6 6.3 0.00022 32.5 23.0 194 90-327 20-218 (299)
66 3g4e_A Regucalcin; six bladed 90.6 6.9 0.00023 32.8 13.8 102 208-321 24-139 (297)
67 2ghs_A AGR_C_1268P; regucalcin 90.1 8.2 0.00028 32.9 14.3 105 209-327 61-174 (326)
68 2dg1_A DRP35, lactonase; beta 90.0 8 0.00027 32.7 14.3 112 208-327 55-177 (333)
69 3dr2_A Exported gluconolactona 89.9 3.8 0.00013 34.5 11.6 108 210-328 58-185 (305)
70 3no2_A Uncharacterized protein 89.8 7.7 0.00026 32.3 17.5 193 94-329 3-203 (276)
71 1l0q_A Surface layer protein; 89.8 9.3 0.00032 33.1 25.1 190 97-330 87-284 (391)
72 3k26_A Polycomb protein EED; W 89.7 8.6 0.0003 32.6 15.6 67 253-321 299-366 (366)
73 3vgz_A Uncharacterized protein 89.5 8.9 0.0003 32.5 22.0 191 106-330 68-271 (353)
74 1gxr_A ESG1, transducin-like e 88.8 9.5 0.00032 31.9 20.6 181 105-327 117-302 (337)
75 3dr2_A Exported gluconolactona 88.4 10 0.00035 31.8 19.5 190 98-327 59-273 (305)
76 2oiz_A Aromatic amine dehydrog 88.4 12 0.00041 32.5 14.7 81 253-341 266-354 (361)
77 3sfz_A APAF-1, apoptotic pepti 88.3 25 0.00085 36.1 21.6 198 93-327 624-834 (1249)
78 4gqb_B Methylosome protein 50; 88.2 12 0.0004 32.2 19.0 195 95-327 93-295 (344)
79 3vgz_A Uncharacterized protein 87.9 12 0.00039 31.7 28.1 206 95-330 100-312 (353)
80 2hqs_A Protein TOLB; TOLB, PAL 87.3 15 0.00052 32.5 22.7 187 107-332 203-398 (415)
81 1k8k_C P40, ARP2/3 complex 41 86.9 8.5 0.00029 32.8 12.1 108 208-323 19-129 (372)
82 1got_B GT-beta; complex (GTP-b 86.6 14 0.00048 31.4 19.6 107 208-326 154-262 (340)
83 3fm0_A Protein CIAO1; WDR39,SG 86.6 14 0.00049 31.5 18.3 150 171-331 37-191 (345)
84 1jmx_B Amine dehydrogenase; ox 86.1 7.7 0.00026 32.8 11.2 107 208-323 10-136 (349)
85 3jrp_A Fusion protein of prote 85.8 16 0.00053 31.1 24.3 120 208-332 171-299 (379)
86 1rwi_B Serine/threonine-protei 85.5 13 0.00045 30.1 20.5 187 93-323 75-266 (270)
87 2fp8_A Strictosidine synthase; 85.2 16 0.00055 30.8 13.1 114 208-327 29-180 (322)
88 3bg1_A Protein SEC13 homolog; 85.0 16 0.00055 30.7 17.9 113 213-332 183-305 (316)
89 3v9f_A Two-component system se 85.0 29 0.001 33.6 20.4 112 208-328 417-531 (781)
90 1rwi_B Serine/threonine-protei 84.7 14 0.00049 29.8 20.5 191 91-326 30-227 (270)
91 1k8k_C P40, ARP2/3 complex 41 84.5 18 0.00061 30.7 21.4 192 104-327 27-239 (372)
92 3sjl_D Methylamine dehydrogena 84.3 21 0.00073 31.4 13.8 114 208-330 237-372 (386)
93 3no2_A Uncharacterized protein 84.2 17 0.00057 30.2 16.2 147 170-330 13-163 (276)
94 1yfq_A Cell cycle arrest prote 84.0 18 0.00061 30.3 19.6 105 219-327 170-288 (342)
95 4a2l_A BT_4663, two-component 83.7 34 0.0011 33.3 23.0 113 209-328 368-487 (795)
96 2pm7_B Protein transport prote 83.6 18 0.00061 30.0 19.5 117 209-330 170-295 (297)
97 3vl1_A 26S proteasome regulato 83.5 22 0.00075 30.9 17.4 105 211-321 305-419 (420)
98 3hrp_A Uncharacterized protein 83.4 21 0.00072 31.6 13.1 111 208-327 141-255 (409)
99 2p4o_A Hypothetical protein; p 83.3 19 0.00065 30.1 23.1 196 94-327 41-247 (306)
100 4e54_B DNA damage-binding prot 83.2 24 0.00081 31.2 14.8 28 298-325 407-434 (435)
101 4aow_A Guanine nucleotide-bind 82.3 21 0.00071 29.8 20.4 105 208-323 226-339 (340)
102 4ggc_A P55CDC, cell division c 82.1 20 0.00069 29.6 19.1 147 93-272 34-181 (318)
103 3o4h_A Acylamino-acid-releasin 81.7 33 0.0011 31.7 15.6 185 96-327 123-320 (582)
104 1n7d_A LDL receptor, low-densi 80.4 42 0.0014 32.2 15.6 140 171-328 474-621 (699)
105 1gxr_A ESG1, transducin-like e 80.3 24 0.00082 29.3 23.1 197 93-327 60-261 (337)
106 2aq5_A Coronin-1A; WD40 repeat 79.5 30 0.001 30.0 23.1 148 171-331 153-311 (402)
107 1flg_A Protein (quinoprotein e 79.5 41 0.0014 31.5 15.1 122 202-328 62-200 (582)
108 2fp8_A Strictosidine synthase; 79.2 27 0.00094 29.3 13.1 92 171-271 206-312 (322)
109 3jro_A Fusion protein of prote 78.4 41 0.0014 32.4 14.2 97 219-323 31-134 (753)
110 4a11_B DNA excision repair pro 78.3 32 0.0011 29.5 16.9 146 171-324 121-279 (408)
111 1nir_A Nitrite reductase; hemo 78.0 43 0.0015 30.9 21.6 197 94-330 147-364 (543)
112 3scy_A Hypothetical bacterial 77.8 32 0.0011 29.3 17.2 117 208-331 165-303 (361)
113 2p4o_A Hypothetical protein; p 77.5 30 0.001 28.9 13.5 105 208-323 42-149 (306)
114 3sfz_A APAF-1, apoptotic pepti 77.4 17 0.0006 37.2 11.7 184 105-326 1023-1212(1249)
115 2ghs_A AGR_C_1268P; regucalcin 77.3 32 0.0011 29.1 18.6 196 92-327 57-266 (326)
116 2ad6_A Methanol dehydrogenase 77.2 43 0.0015 31.2 13.4 120 202-330 56-194 (571)
117 2aq5_A Coronin-1A; WD40 repeat 77.1 36 0.0012 29.5 22.3 105 211-323 146-256 (402)
118 1ri6_A Putative isomerase YBHE 76.9 31 0.0011 28.7 22.4 119 208-331 139-274 (343)
119 3nol_A Glutamine cyclotransfer 76.7 31 0.0011 28.5 16.9 143 171-332 64-212 (262)
120 3lrv_A PRE-mRNA-splicing facto 76.3 34 0.0012 28.9 17.3 107 208-323 138-246 (343)
121 2hz6_A Endoplasmic reticulum t 73.8 8.7 0.0003 33.5 7.3 103 207-329 91-200 (369)
122 2ovr_B FBW7, F-BOX/WD repeat p 73.7 47 0.0016 29.2 25.1 137 171-322 298-443 (445)
123 3m0c_C LDL receptor, low-densi 73.4 71 0.0024 31.2 26.4 151 143-323 475-634 (791)
124 1p22_A F-BOX/WD-repeat protein 73.4 47 0.0016 29.1 18.5 106 204-323 261-367 (435)
125 3mbr_X Glutamine cyclotransfer 73.2 36 0.0012 27.7 22.6 144 170-332 41-190 (243)
126 2ynn_A Coatomer subunit beta'; 73.1 39 0.0013 28.0 19.9 192 95-329 66-267 (304)
127 3v7d_B Cell division control p 73.1 49 0.0017 29.2 20.0 70 250-327 277-347 (464)
128 2ojh_A Uncharacterized protein 72.9 35 0.0012 27.4 18.7 183 105-328 20-213 (297)
129 3ott_A Two-component system se 72.5 66 0.0023 30.9 13.9 105 211-327 75-180 (758)
130 4a11_B DNA excision repair pro 72.2 46 0.0016 28.4 16.6 195 104-327 119-329 (408)
131 1npe_A Nidogen, entactin; glyc 71.2 40 0.0014 27.3 23.5 192 91-327 43-244 (267)
132 4gqb_B Methylosome protein 50; 71.1 42 0.0014 28.7 11.0 66 258-327 98-164 (344)
133 3lrv_A PRE-mRNA-splicing facto 69.8 49 0.0017 27.8 17.5 141 171-326 148-299 (343)
134 4gga_A P55CDC, cell division c 69.4 51 0.0017 28.8 11.5 89 232-327 95-184 (420)
135 2bkl_A Prolyl endopeptidase; m 69.3 79 0.0027 30.0 24.5 144 171-329 251-405 (695)
136 3nok_A Glutaminyl cyclase; bet 68.5 50 0.0017 27.4 15.3 140 173-332 76-221 (268)
137 1kb0_A Quinohemoprotein alcoho 67.7 56 0.0019 31.1 12.0 121 202-330 71-208 (677)
138 4g56_B MGC81050 protein; prote 67.6 58 0.002 27.8 17.6 102 209-322 239-344 (357)
139 3fvz_A Peptidyl-glycine alpha- 67.5 55 0.0019 27.5 17.5 165 95-272 154-322 (329)
140 2vdu_B TRNA (guanine-N(7)-)-me 67.4 66 0.0023 28.4 22.3 115 208-327 251-399 (450)
141 2ojh_A Uncharacterized protein 67.4 47 0.0016 26.6 19.7 200 93-330 50-267 (297)
142 1sq9_A Antiviral protein SKI8; 66.9 60 0.002 27.7 13.7 117 210-328 82-223 (397)
143 3dwl_C Actin-related protein 2 66.5 15 0.00052 31.4 7.3 109 208-323 22-133 (377)
144 3f3f_A Nucleoporin SEH1; struc 66.3 54 0.0018 27.0 15.1 110 209-323 23-145 (351)
145 2hqs_A Protein TOLB; TOLB, PAL 64.8 73 0.0025 27.9 24.2 184 107-328 159-351 (415)
146 2xzm_R RACK1; ribosome, transl 64.7 48 0.0017 27.9 10.1 72 252-326 38-112 (343)
147 1kv9_A Type II quinohemoprotei 64.7 72 0.0025 30.3 12.1 120 202-329 60-195 (668)
148 1r5m_A SIR4-interacting protei 64.0 69 0.0024 27.4 19.5 188 95-321 217-425 (425)
149 3v65_B Low-density lipoprotein 63.8 74 0.0025 27.7 21.7 145 92-271 124-274 (386)
150 3hxj_A Pyrrolo-quinoline quino 63.3 49 0.0017 27.4 9.8 75 172-259 117-194 (330)
151 2pm9_A Protein WEB1, protein t 63.1 72 0.0025 27.3 16.3 103 211-323 229-339 (416)
152 3f3f_A Nucleoporin SEH1; struc 63.1 62 0.0021 26.6 23.8 34 298-331 313-348 (351)
153 2pbi_B Guanine nucleotide-bind 61.7 74 0.0025 27.0 19.8 176 105-318 174-354 (354)
154 3mmy_A MRNA export factor; mRN 61.7 70 0.0024 26.7 19.3 198 95-327 97-310 (368)
155 1kb0_A Quinohemoprotein alcoho 61.2 1.1E+02 0.0039 29.0 16.2 62 172-234 87-155 (677)
156 3hxj_A Pyrrolo-quinoline quino 61.0 54 0.0019 27.1 9.7 99 208-321 225-323 (330)
157 2pm7_B Protein transport prote 60.9 68 0.0023 26.3 20.2 66 253-322 170-239 (297)
158 1yiq_A Quinohemoprotein alcoho 60.7 1.1E+02 0.0038 29.2 12.6 120 202-329 64-200 (689)
159 3mmy_A MRNA export factor; mRN 59.8 75 0.0026 26.5 10.7 71 253-329 54-125 (368)
160 2hes_X YDR267CP; beta-propelle 59.5 78 0.0027 26.5 17.3 98 219-321 221-328 (330)
161 3i2n_A WD repeat-containing pr 59.2 77 0.0026 26.3 20.6 144 171-322 189-354 (357)
162 4ggc_A P55CDC, cell division c 59.2 72 0.0025 26.0 12.2 87 234-327 17-104 (318)
163 1pby_B Quinohemoprotein amine 58.9 75 0.0026 26.1 15.5 103 219-329 11-132 (337)
164 2ynn_A Coatomer subunit beta'; 58.9 75 0.0026 26.1 10.7 92 219-322 35-129 (304)
165 1w6s_A Methanol dehydrogenase 57.7 1.2E+02 0.0043 28.3 12.2 121 202-330 56-200 (599)
166 3i2n_A WD repeat-containing pr 56.2 86 0.003 26.0 19.0 107 207-322 178-292 (357)
167 1got_B GT-beta; complex (GTP-b 55.9 90 0.0031 26.2 21.3 110 208-326 195-306 (340)
168 3hrp_A Uncharacterized protein 55.8 1.1E+02 0.0036 26.9 24.8 206 90-330 136-363 (409)
169 3bws_A Protein LP49; two-domai 55.5 1E+02 0.0035 26.6 23.5 182 105-321 232-432 (433)
170 2hz6_A Endoplasmic reticulum t 55.0 7.5 0.00026 33.9 3.1 29 204-233 5-35 (369)
171 3fm0_A Protein CIAO1; WDR39,SG 54.5 97 0.0033 26.1 22.6 191 95-319 27-223 (345)
172 1vyh_C Platelet-activating fac 54.4 1.1E+02 0.0037 26.6 21.3 64 253-324 308-372 (410)
173 3odt_A Protein DOA1; ubiquitin 54.2 86 0.0029 25.4 19.0 110 205-327 110-220 (313)
174 2xyi_A Probable histone-bindin 54.0 83 0.0028 27.5 10.0 67 255-322 196-264 (430)
175 3v64_C Agrin; beta propeller, 53.7 1E+02 0.0036 26.2 23.1 144 92-268 81-230 (349)
176 1n7d_A LDL receptor, low-densi 52.7 93 0.0032 29.8 10.6 58 171-232 561-618 (699)
177 3mkq_A Coatomer beta'-subunit; 52.3 1.6E+02 0.0056 28.0 25.7 192 95-327 66-265 (814)
178 3dm0_A Maltose-binding peripla 51.7 1.6E+02 0.0054 27.7 21.6 97 219-327 541-638 (694)
179 3c75_H MADH, methylamine dehyd 51.5 1.3E+02 0.0045 26.7 13.5 111 209-327 277-408 (426)
180 1qks_A Cytochrome CD1 nitrite 51.3 1.5E+02 0.0052 27.4 22.4 196 95-330 166-382 (567)
181 1qks_A Cytochrome CD1 nitrite 50.6 1.6E+02 0.0054 27.3 14.1 111 208-330 166-284 (567)
182 3ow8_A WD repeat-containing pr 50.5 1.1E+02 0.0037 25.5 22.6 109 208-327 175-285 (321)
183 1fwx_A Nitrous oxide reductase 49.6 1.1E+02 0.0037 28.7 10.0 130 207-341 286-450 (595)
184 3k26_A Polycomb protein EED; W 49.4 1.1E+02 0.0038 25.3 18.6 107 209-324 85-195 (366)
185 1erj_A Transcriptional repress 49.2 1.3E+02 0.0044 25.9 24.2 200 94-326 133-346 (393)
186 3vl1_A 26S proteasome regulato 48.1 1.3E+02 0.0045 25.7 23.5 193 93-323 106-324 (420)
187 4aez_A CDC20, WD repeat-contai 47.4 1.4E+02 0.0046 25.7 23.9 105 210-325 273-384 (401)
188 1kv9_A Type II quinohemoprotei 47.4 1.9E+02 0.0065 27.4 16.6 30 204-234 113-144 (668)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 47.2 1.1E+02 0.0039 24.8 22.3 106 208-322 186-300 (314)
190 2be1_A Serine/threonine-protei 46.5 80 0.0027 27.2 8.1 59 171-230 66-132 (339)
191 3gre_A Serine/threonine-protei 46.1 1.5E+02 0.005 25.7 10.5 71 252-328 181-252 (437)
192 3bg1_A Protein SEC13 homolog; 46.1 1.3E+02 0.0043 24.9 13.1 109 209-326 25-142 (316)
193 2kwv_A RAD30 homolog B, DNA po 45.8 10 0.00035 21.7 1.5 15 3-17 23-37 (48)
194 1vyh_C Platelet-activating fac 45.7 1.5E+02 0.0051 25.7 19.5 61 208-271 203-264 (410)
195 2xyi_A Probable histone-bindin 45.7 1.5E+02 0.0052 25.8 14.2 108 211-325 292-414 (430)
196 3fvz_A Peptidyl-glycine alpha- 45.5 1.3E+02 0.0045 25.0 25.7 205 93-321 99-322 (329)
197 1pgu_A Actin interacting prote 44.7 1.8E+02 0.0062 26.4 19.1 185 93-322 415-615 (615)
198 3v64_C Agrin; beta propeller, 44.3 1.5E+02 0.0051 25.3 21.7 107 143-271 77-188 (349)
199 3v65_B Low-density lipoprotein 43.8 1.6E+02 0.0055 25.5 22.3 141 95-272 87-232 (386)
200 1jmx_B Amine dehydrogenase; ox 43.6 1.4E+02 0.0047 24.6 20.3 31 299-330 262-293 (349)
201 3azo_A Aminopeptidase; POP fam 42.1 2.1E+02 0.0073 26.5 20.3 147 171-328 216-376 (662)
202 2hes_X YDR267CP; beta-propelle 41.8 1.5E+02 0.0052 24.6 16.1 117 209-330 165-289 (330)
203 1flg_A Protein (quinoprotein e 41.3 2.2E+02 0.0074 26.4 10.9 78 172-260 466-547 (582)
204 4ery_A WD repeat-containing pr 41.2 1.4E+02 0.0049 24.2 24.7 194 95-327 76-274 (312)
205 3iz6_a 40S ribosomal protein R 41.2 1.7E+02 0.0057 25.0 19.1 109 208-326 217-334 (380)
206 3odt_A Protein DOA1; ubiquitin 41.0 1.4E+02 0.0048 24.0 22.7 111 207-331 194-306 (313)
207 3ju4_A Endo-N-acetylneuraminid 40.8 99 0.0034 27.5 7.5 56 204-260 344-405 (670)
208 3ei3_B DNA damage-binding prot 40.7 1.6E+02 0.0056 24.8 18.3 136 171-321 95-236 (383)
209 2qe8_A Uncharacterized protein 40.5 1.4E+02 0.0046 25.2 8.9 66 204-269 71-151 (343)
210 1yiq_A Quinohemoprotein alcoho 40.4 2.5E+02 0.0085 26.7 16.9 61 173-234 81-148 (689)
211 1sq9_A Antiviral protein SKI8; 40.3 1.7E+02 0.0057 24.7 20.6 110 208-323 244-397 (397)
212 3p5b_L Low density lipoprotein 40.3 1.9E+02 0.0064 25.2 25.1 152 143-323 163-322 (400)
213 2pbi_B Guanine nucleotide-bind 39.4 1.7E+02 0.0059 24.6 22.1 107 209-324 210-318 (354)
214 3amr_A 3-phytase; beta-propell 38.2 2E+02 0.0067 24.9 16.5 154 106-285 98-272 (355)
215 1npe_A Nidogen, entactin; glyc 38.2 1.5E+02 0.0052 23.6 19.6 111 208-327 90-204 (267)
216 4hw6_A Hypothetical protein, I 38.1 2.1E+02 0.0072 25.3 14.2 113 203-327 142-266 (433)
217 3p5b_L Low density lipoprotein 38.1 2E+02 0.0069 25.0 18.6 60 208-271 257-317 (400)
218 3tc9_A Hypothetical hydrolase; 36.9 2.2E+02 0.0075 25.1 14.5 110 208-330 149-266 (430)
219 3frx_A Guanine nucleotide-bind 36.4 1.8E+02 0.0062 24.0 23.5 195 93-325 74-271 (319)
220 1erj_A Transcriptional repress 36.2 2E+02 0.007 24.5 20.4 104 209-323 177-289 (393)
221 3vu4_A KMHSV2; beta-propeller 36.0 2E+02 0.0067 24.3 22.0 67 252-324 206-274 (355)
222 4h5i_A Guanine nucleotide-exch 35.8 2E+02 0.0069 24.3 21.7 202 93-331 142-359 (365)
223 3tc9_A Hypothetical hydrolase; 35.5 2.3E+02 0.0079 24.9 15.3 147 94-271 148-300 (430)
224 3iz6_a 40S ribosomal protein R 33.8 2.2E+02 0.0075 24.2 25.3 109 208-322 260-376 (380)
225 3mkq_A Coatomer beta'-subunit; 33.5 3.2E+02 0.011 26.0 23.6 183 105-327 33-223 (814)
226 2ad6_A Methanol dehydrogenase 33.1 2.9E+02 0.01 25.4 10.4 78 172-260 444-525 (571)
227 1r5m_A SIR4-interacting protei 31.9 2.3E+02 0.0079 23.9 22.4 109 208-329 217-327 (425)
228 2lyd_A Decapping protein 1; DC 31.3 48 0.0016 24.2 3.6 29 303-332 29-57 (134)
229 3zwl_B Eukaryotic translation 31.0 2.2E+02 0.0076 23.4 25.3 71 252-329 186-257 (369)
230 2xbg_A YCF48-like protein; pho 30.5 2.4E+02 0.0081 23.6 13.9 140 173-328 14-158 (327)
231 3s94_A LRP-6, low-density lipo 30.4 3.4E+02 0.012 25.4 24.8 189 92-324 48-246 (619)
232 4a0p_A LRP6, LRP-6, low-densit 29.9 3.5E+02 0.012 25.3 24.3 107 143-271 41-152 (628)
233 4ery_A WD repeat-containing pr 29.4 2.3E+02 0.0077 23.0 27.0 184 105-327 43-229 (312)
234 2pm9_A Protein WEB1, protein t 29.0 2.6E+02 0.009 23.6 17.6 113 209-327 178-300 (416)
235 1yfq_A Cell cycle arrest prote 28.9 2.4E+02 0.0081 23.0 9.4 72 252-328 22-96 (342)
236 1evh_A WH1 domain, protein (ME 28.9 1.5E+02 0.0051 20.7 5.9 42 107-159 11-52 (112)
237 1yr2_A Prolyl oligopeptidase; 28.1 3.9E+02 0.013 25.3 27.0 143 171-328 293-448 (741)
238 1nr0_A Actin interacting prote 27.8 3.6E+02 0.012 24.8 20.0 152 95-271 201-354 (611)
239 3s94_A LRP-6, low-density lipo 27.7 3.8E+02 0.013 25.0 25.3 193 92-327 357-557 (619)
240 2iwa_A Glutamine cyclotransfer 27.5 2.6E+02 0.0087 22.9 21.8 161 143-331 25-191 (266)
241 1ddw_A GLGF-domain protein hom 26.9 1.2E+02 0.004 21.6 5.0 40 107-159 11-51 (120)
242 3zwl_B Eukaryotic translation 26.6 2.7E+02 0.0091 22.9 22.4 107 208-327 186-310 (369)
243 2xbg_A YCF48-like protein; pho 24.9 3E+02 0.01 22.9 15.1 109 208-327 89-199 (327)
244 3dm0_A Maltose-binding peripla 24.9 4.3E+02 0.015 24.7 21.2 103 208-320 572-692 (694)
245 1w6s_A Methanol dehydrogenase 24.8 4.3E+02 0.015 24.6 23.2 60 172-234 131-199 (599)
246 2ece_A 462AA long hypothetical 24.2 3.9E+02 0.013 24.0 15.1 108 219-331 228-363 (462)
247 1mda_H Methylamine dehydrogena 23.6 3.5E+02 0.012 23.3 10.7 111 208-329 222-354 (368)
248 3azo_A Aminopeptidase; POP fam 22.9 4.5E+02 0.015 24.2 19.4 213 95-327 90-331 (662)
249 4gq1_A NUP37; propeller, trans 22.8 3.6E+02 0.012 23.0 11.7 66 252-325 155-222 (393)
250 2ymu_A WD-40 repeat protein; u 22.4 4.2E+02 0.014 23.7 23.2 195 90-327 350-545 (577)
251 3gre_A Serine/threonine-protei 22.4 3.7E+02 0.013 23.0 20.9 112 209-328 182-299 (437)
252 2dk7_A Transcription elongatio 22.3 92 0.0032 19.9 3.2 23 309-331 27-51 (73)
253 2xe4_A Oligopeptidase B; hydro 22.1 5.2E+02 0.018 24.7 12.1 117 208-329 330-466 (751)
254 1egx_A VAsp, vasodilator-stimu 21.7 1.6E+02 0.0055 20.6 4.9 42 108-159 12-53 (115)
255 2qe8_A Uncharacterized protein 21.0 3.6E+02 0.012 22.4 9.8 112 208-327 27-160 (343)
256 3ott_A Two-component system se 21.0 5.4E+02 0.018 24.4 22.4 192 90-327 68-266 (758)
257 1pby_B Quinohemoprotein amine 20.8 3.3E+02 0.011 21.9 25.9 34 298-331 286-320 (337)
258 3sov_A LRP-6, low-density lipo 20.7 3.7E+02 0.013 22.4 23.5 58 208-268 133-193 (318)
259 3sre_A PON1, serum paraoxonase 20.3 4.1E+02 0.014 22.8 18.6 187 105-320 81-297 (355)
260 2vdu_B TRNA (guanine-N(7)-)-me 20.1 4.3E+02 0.015 22.9 22.7 69 253-329 210-279 (450)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.70 E-value=1.3e-14 Score=127.17 Aligned_cols=208 Identities=11% Similarity=0.081 Sum_probs=141.4
Q ss_pred ecCeeEEeeec---CCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCC
Q 018593 93 SCNGLLCCSSI---PEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPD 169 (353)
Q Consensus 93 s~~Gll~~~~~---~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 169 (353)
..+|.+++... .....+.++||.|++|..+++++.+ ...+.. ... +-+++++|.. .....
T Consensus 53 ~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~-----~~~-----~~~iyv~GG~---~~~~~ 115 (306)
T 3ii7_A 53 FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP----RDSLAA-----CAA-----EGKIYTSGGS---EVGNS 115 (306)
T ss_dssp EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC----CBSCEE-----EEE-----TTEEEEECCB---BTTBS
T ss_pred EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc----ccceeE-----EEE-----CCEEEEECCC---CCCCc
Confidence 34666655431 1236899999999999999988765 222211 111 2267777631 11122
Q ss_pred CcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCC---------CEEEEEECCCceEEEe-eCCCC
Q 018593 170 GTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC---------SFILALDLEGDVWRKI-SLPDK 239 (353)
Q Consensus 170 ~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~---------~~i~~~D~~~~~~~~~-~~P~~ 239 (353)
....+++||..+++|+.. +.+ |. .+.....+.++|+||.+++.. ..+.+||+.+++|+.+ ++|..
T Consensus 116 ~~~~~~~~d~~~~~W~~~---~~~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 190 (306)
T 3ii7_A 116 ALYLFECYDTRTESWHTK---PSM-LT-QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA 190 (306)
T ss_dssp CCCCEEEEETTTTEEEEE---CCC-SS-CCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC
T ss_pred EeeeEEEEeCCCCceEeC---CCC-cC-CcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch
Confidence 356899999999999999 555 32 345556788999999998731 4699999999999999 66665
Q ss_pred CCCCCceeEEEECCEEEEEEe-cCC--eEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-----
Q 018593 240 VGSESRSYLLECDGCLSVIEI-SDE--WMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH----- 311 (353)
Q Consensus 240 ~~~~~~~~l~~~~g~L~~v~~-~~~--~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~----- 311 (353)
. ....++..+|+|+++++ ... .-++|.+ +..+.+|..+..++.+..... ++..++.++++++.
T Consensus 191 r---~~~~~~~~~~~i~v~GG~~~~~~~~~~~~y-d~~~~~W~~~~~~p~~r~~~~-----~~~~~~~i~v~GG~~~~~~ 261 (306)
T 3ii7_A 191 R---KNHGLVFVKDKIFAVGGQNGLGGLDNVEYY-DIKLNEWKMVSPMPWKGVTVK-----CAAVGSIVYVLAGFQGVGR 261 (306)
T ss_dssp C---BSCEEEEETTEEEEECCEETTEEBCCEEEE-ETTTTEEEECCCCSCCBSCCE-----EEEETTEEEEEECBCSSSB
T ss_pred h---hcceEEEECCEEEEEeCCCCCCCCceEEEe-eCCCCcEEECCCCCCCcccee-----EEEECCEEEEEeCcCCCee
Confidence 5 56677888999999987 221 2346665 334488999877775432221 22236776666653
Q ss_pred -CcEEEEECCCCeEEEeeeec
Q 018593 312 -KQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 312 -~~~~~yd~~~~~~~~v~~~~ 331 (353)
..+..||+++++|+.+..+.
T Consensus 262 ~~~~~~yd~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 262 LGHILEYNTETDKWVANSKVR 282 (306)
T ss_dssp CCEEEEEETTTTEEEEEEEEE
T ss_pred eeeEEEEcCCCCeEEeCCCcc
Confidence 34999999999999997775
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.69 E-value=4e-14 Score=124.63 Aligned_cols=193 Identities=11% Similarity=0.138 Sum_probs=134.2
Q ss_pred eEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEEe
Q 018593 108 VYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRKF 187 (353)
Q Consensus 108 ~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~~ 187 (353)
.+.++||.|++|..+|++|.+ ...+... .. +-+++++|..... ........+++||..+++|+..
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~----r~~~~~~-----~~-----~~~lyv~GG~~~~-~~~~~~~~~~~~d~~~~~W~~~ 132 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSP----RCLFGLG-----EA-----LNSIYVVGGREIK-DGERCLDSVMCYDRLSFKWGES 132 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSC----EESCEEE-----EE-----TTEEEEECCEESS-TTCCBCCCEEEEETTTTEEEEC
T ss_pred ceEEecCCCCeEEECCCCCcc----hhceeEE-----EE-----CCEEEEEeCCcCC-CCCcccceEEEECCCCCcEeEC
Confidence 489999999999999988765 2222211 11 1277777632110 1122256789999999999999
Q ss_pred eeccccceeeeeecCceEEEcceEEeeecCC------CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEEEe
Q 018593 188 VSVQDYYQFSIMNRNQVVFVNGALHWLTDSC------SFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVIEI 260 (353)
Q Consensus 188 ~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~------~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~ 260 (353)
+++ |. .+.....+.++|+||.+++.. ..+..||+.+++|+.+ ++|... .....+..+|+|+++++
T Consensus 133 ---~~~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG 204 (315)
T 4asc_A 133 ---DPL-PY-VVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR---SLFGATVHDGRIIVAAG 204 (315)
T ss_dssp ---CCC-SS-CCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEEEE
T ss_pred ---CCC-CC-cccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch---hceEEEEECCEEEEEec
Confidence 555 32 355566888999999998862 5799999999999998 566655 55677888999999988
Q ss_pred -cC--CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC---------------CcEEEEECCCC
Q 018593 261 -SD--EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH---------------KQVLVYHRNGR 322 (353)
Q Consensus 261 -~~--~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~---------------~~~~~yd~~~~ 322 (353)
.. ..-++|.+ +..+.+|+.+..++.+..... .+..++.++++++. ..+..||++++
T Consensus 205 ~~~~~~~~~~~~y-d~~~~~W~~~~~~p~~r~~~~-----~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 205 VTDTGLTSSAEVY-SITDNKWAPFEAFPQERSSLS-----LVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp ECSSSEEEEEEEE-ETTTTEEEEECCCSSCCBSCE-----EEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred cCCCCccceEEEE-ECCCCeEEECCCCCCccccee-----EEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 22 23467777 334489999987776432221 22236676666543 23899999999
Q ss_pred eEEEeee
Q 018593 323 LWKEMYS 329 (353)
Q Consensus 323 ~~~~v~~ 329 (353)
+|+.+..
T Consensus 279 ~W~~~~~ 285 (315)
T 4asc_A 279 KWEGVLR 285 (315)
T ss_dssp EEEEEES
T ss_pred hhhhhcc
Confidence 9999943
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.69 E-value=6.5e-14 Score=123.45 Aligned_cols=222 Identities=10% Similarity=0.138 Sum_probs=144.4
Q ss_pred ceeeecCCC-CCceeEeeecCeeEEeeecC----------CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEE
Q 018593 76 VTEISLDFL-HDRVKVRASCNGLLCCSSIP----------EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGL 144 (353)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~s~~Gll~~~~~~----------~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~ 144 (353)
|...+++.. +....-+...+|.+++.... ....+.++||.|++|..+|+++.+ ...+.. .
T Consensus 36 W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~-----~ 106 (318)
T 2woz_A 36 CYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA----RCLFGL-----G 106 (318)
T ss_dssp EEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC----BCSCEE-----E
T ss_pred eecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc----ccccce-----E
Confidence 655444432 22233344456666554321 012388999999999999988765 221111 1
Q ss_pred EeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCC------
Q 018593 145 ACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC------ 218 (353)
Q Consensus 145 g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~------ 218 (353)
.. +-+++++|.... ........+++||..+++|+.. +++ |. .+.....+.++|+||.+++..
T Consensus 107 ~~-----~~~iyv~GG~~~--~~~~~~~~~~~yd~~~~~W~~~---~~~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 107 EV-----DDKIYVVAGKDL--QTEASLDSVLCYDPVAAKWSEV---KNL-PI-KVYGHNVISHNGMIYCLGGKTDDKKCT 174 (318)
T ss_dssp EE-----TTEEEEEEEEBT--TTCCEEEEEEEEETTTTEEEEE---CCC-SS-CEESCEEEEETTEEEEECCEESSSCBC
T ss_pred EE-----CCEEEEEcCccC--CCCcccceEEEEeCCCCCEeEC---CCC-CC-cccccEEEEECCEEEEEcCCCCCCCcc
Confidence 11 126777763210 0112246788999999999999 555 32 355566788999999998741
Q ss_pred CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEEEe-cCC--eEEEEEEecCCCCCeEEEEeeccccccCccc
Q 018593 219 SFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVIEI-SDE--WMETWVLKDYYRDEWHSVDKVSLRCIKGMVP 294 (353)
Q Consensus 219 ~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~-~~~--~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~ 294 (353)
..+..||+.+++|+.+ ++|... ....++..+|+|+++++ ... .-++|.+ +..+.+|+++..+|.+.....
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y-d~~~~~W~~~~~~p~~r~~~~-- 248 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPR---SMFGVAIHKGKIVIAGGVTEDGLSASVEAF-DLKTNKWEVMTEFPQERSSIS-- 248 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEEEEEETTEEEEEEEEE-ETTTCCEEECCCCSSCCBSCE--
T ss_pred ceEEEEcCCCCEEEECCCCCCCc---ccceEEEECCEEEEEcCcCCCCccceEEEE-ECCCCeEEECCCCCCcccceE--
Confidence 4699999999999999 566555 45667888999999988 322 3457766 344589999887776432211
Q ss_pred eeeeeecCCcEEEEEeC---------------CcEEEEECCCCeEEEe
Q 018593 295 SIFPISQTREYVFLATH---------------KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 295 ~~~~~~~~~~~v~~~~~---------------~~~~~yd~~~~~~~~v 327 (353)
.+..++.++++++. ..+..||+++++|+.+
T Consensus 249 ---~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 249 ---LVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ---EEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ---EEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 22336675555432 3499999999999999
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.66 E-value=3.6e-14 Score=124.54 Aligned_cols=193 Identities=15% Similarity=0.104 Sum_probs=133.3
Q ss_pred ceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEE
Q 018593 107 GVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRK 186 (353)
Q Consensus 107 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~ 186 (353)
..+.++||.|++|..+++++.+ ...+.. ...+ -+++++|.... ......+++||..+++|+.
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~----r~~~~~-----~~~~-----~~iyv~GG~~~----~~~~~~~~~yd~~~~~W~~ 151 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVP----RNRIGV-----GVID-----GHIYAVGGSHG----CIHHNSVERYEPERDEWHL 151 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSC----CBTCEE-----EEET-----TEEEEECCEET----TEECCCEEEEETTTTEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcC----ccccEE-----EEEC-----CEEEEEcCCCC----CcccccEEEECCCCCeEeE
Confidence 4789999999999999988765 222111 1111 26777763210 1124578999999999999
Q ss_pred eeeccccceeeeeecCceEEEcceEEeeecCC-----CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEEEe
Q 018593 187 FVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC-----SFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVIEI 260 (353)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~-----~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~ 260 (353)
. +.+ | ..+.....+.++|.||.+++.. ..+..||+.+++|+.+ ++|... ....++..+|+|+++++
T Consensus 152 ~---~~~-p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG 223 (308)
T 1zgk_A 152 V---APM-L-TRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR---SGAGVCVLHNCIYAAGG 223 (308)
T ss_dssp C---CCC-S-SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEECC
T ss_pred C---CCC-C-ccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc---ccceEEEECCEEEEEeC
Confidence 9 555 3 2344556788899999998743 5799999999999998 566554 45667788999999987
Q ss_pred -cC--CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC------CcEEEEECCCCeEEEeeeec
Q 018593 261 -SD--EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH------KQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 261 -~~--~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~yd~~~~~~~~v~~~~ 331 (353)
.. ..-++|.+ +..+.+|+++..++.+..... .+..++.++++++. ..+..||+++++|+.+..+.
T Consensus 224 ~~~~~~~~~v~~y-d~~~~~W~~~~~~p~~r~~~~-----~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 297 (308)
T 1zgk_A 224 YDGQDQLNSVERY-DVETETWTFVAPMKHRRSALG-----ITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMT 297 (308)
T ss_dssp BCSSSBCCCEEEE-ETTTTEEEECCCCSSCCBSCE-----EEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS
T ss_pred CCCCCccceEEEE-eCCCCcEEECCCCCCCccceE-----EEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCC
Confidence 21 23456666 334489999887765432211 22236776666542 23999999999999997664
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.65 E-value=8e-14 Score=121.80 Aligned_cols=208 Identities=12% Similarity=0.122 Sum_probs=139.4
Q ss_pred eecCeeEEeeec----CCCceEEEEcccccc---eeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeeccc
Q 018593 92 ASCNGLLCCSSI----PEMGVYYVCNPMTRE---WKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAF 164 (353)
Q Consensus 92 ~s~~Gll~~~~~----~~~~~~~v~NP~t~~---~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~ 164 (353)
...+|.+++... .....++++||.|++ |..+++++.+ ...+.. ... +-+++++|..
T Consensus 59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~----r~~~~~-----~~~-----~~~lyv~GG~--- 121 (301)
T 2vpj_A 59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR----RGLAGA-----TTL-----GDMIYVSGGF--- 121 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC----CBSCEE-----EEE-----TTEEEEECCB---
T ss_pred EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC----ccceeE-----EEE-----CCEEEEEccc---
Confidence 334555555431 123579999999999 9999988765 222211 111 1267777631
Q ss_pred CCCCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCC-----CEEEEEECCCceEEEe-eCCC
Q 018593 165 GHRPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC-----SFILALDLEGDVWRKI-SLPD 238 (353)
Q Consensus 165 ~~~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~-----~~i~~~D~~~~~~~~~-~~P~ 238 (353)
. .......+++||..+++|+.. +.+ | ..+.....+.++|.||.+++.. ..+.+||+.+++|+.+ ++|.
T Consensus 122 ~-~~~~~~~~~~~d~~~~~W~~~---~~~-p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 195 (301)
T 2vpj_A 122 D-GSRRHTSMERYDPNIDQWSML---GDM-Q-TAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMAT 195 (301)
T ss_dssp C-SSCBCCEEEEEETTTTEEEEE---EEC-S-SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSS
T ss_pred C-CCcccceEEEEcCCCCeEEEC---CCC-C-CCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCc
Confidence 1 111245789999999999998 444 3 2344556788899999998743 5799999999999999 5666
Q ss_pred CCCCCCceeEEEECCEEEEEEe-cCC--eEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC----
Q 018593 239 KVGSESRSYLLECDGCLSVIEI-SDE--WMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH---- 311 (353)
Q Consensus 239 ~~~~~~~~~l~~~~g~L~~v~~-~~~--~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~---- 311 (353)
.. ....++..+|+|+++++ ... .-++|.+ +..+.+|..+..++.+.... . .+..++.++++++.
T Consensus 196 ~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~y-d~~~~~W~~~~~~p~~r~~~---~--~~~~~~~i~v~GG~~~~~ 266 (301)
T 2vpj_A 196 KR---SGAGVALLNDHIYVVGGFDGTAHLSSVEAY-NIRTDSWTTVTSMTTPRCYV---G--ATVLRGRLYAIAGYDGNS 266 (301)
T ss_dssp CC---BSCEEEEETTEEEEECCBCSSSBCCCEEEE-ETTTTEEEEECCCSSCCBSC---E--EEEETTEEEEECCBCSSS
T ss_pred cc---ccceEEEECCEEEEEeCCCCCcccceEEEE-eCCCCcEEECCCCCCcccce---e--EEEECCEEEEEcCcCCCc
Confidence 55 45677888999999987 211 2346655 33448999988777543221 1 22236775555543
Q ss_pred --CcEEEEECCCCeEEEeeeec
Q 018593 312 --KQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 312 --~~~~~yd~~~~~~~~v~~~~ 331 (353)
..+..||+++++|+.+..+.
T Consensus 267 ~~~~v~~yd~~~~~W~~~~~~~ 288 (301)
T 2vpj_A 267 LLSSIECYDPIIDSWEVVTSMG 288 (301)
T ss_dssp BEEEEEEEETTTTEEEEEEEEE
T ss_pred ccccEEEEcCCCCeEEEcCCCC
Confidence 23899999999999997654
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.63 E-value=9.4e-14 Score=121.45 Aligned_cols=204 Identities=14% Similarity=0.143 Sum_probs=137.5
Q ss_pred ecCeeEEeeec----CCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCC
Q 018593 93 SCNGLLCCSSI----PEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRP 168 (353)
Q Consensus 93 s~~Gll~~~~~----~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~ 168 (353)
..+|.+++... .....+.++||.|++|..+++++.+ ...+... ..+ -+++++|.. .. .
T Consensus 59 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~-----~~~-----~~iyv~GG~---~~-~ 120 (302)
T 2xn4_A 59 YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR----RSTLGAA-----VLN-----GLLYAVGGF---DG-S 120 (302)
T ss_dssp EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC----CBSCEEE-----EET-----TEEEEEEEE---CS-S
T ss_pred EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc----ccceEEE-----EEC-----CEEEEEcCC---CC-C
Confidence 34566655431 1235789999999999999988765 2222211 111 267777632 11 1
Q ss_pred CCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCC-------CEEEEEECCCceEEEe-eCCCCC
Q 018593 169 DGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC-------SFILALDLEGDVWRKI-SLPDKV 240 (353)
Q Consensus 169 ~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~-------~~i~~~D~~~~~~~~~-~~P~~~ 240 (353)
.....+++||..+++|+.. +.+ |. .+.....+.++|.||.+++.. ..+..||+.+++|+.+ ++|...
T Consensus 121 ~~~~~~~~~d~~~~~W~~~---~~~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 195 (302)
T 2xn4_A 121 TGLSSVEAYNIKSNEWFHV---APM-NT-RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR 195 (302)
T ss_dssp CEEEEEEEEETTTTEEEEE---CCC-SS-CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC
T ss_pred ccCceEEEEeCCCCeEeec---CCC-CC-cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc
Confidence 2245788999999999999 555 32 344556788999999998642 4699999999999999 666555
Q ss_pred CCCCceeEEEECCEEEEEEe-cC--CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC------
Q 018593 241 GSESRSYLLECDGCLSVIEI-SD--EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH------ 311 (353)
Q Consensus 241 ~~~~~~~l~~~~g~L~~v~~-~~--~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~------ 311 (353)
....++..+|+|+++++ .+ ..-++|.+ +..+.+|..+..++.+..... .+..++.++++++.
T Consensus 196 ---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y-d~~~~~W~~~~~~~~~r~~~~-----~~~~~~~i~v~GG~~~~~~~ 266 (302)
T 2xn4_A 196 ---SGAGVGVLNNLLYAVGGHDGPLVRKSVEVY-DPTTNAWRQVADMNMCRRNAG-----VCAVNGLLYVVGGDDGSCNL 266 (302)
T ss_dssp ---BSCEEEEETTEEEEECCBSSSSBCCCEEEE-ETTTTEEEEECCCSSCCBSCE-----EEEETTEEEEECCBCSSSBC
T ss_pred ---ccccEEEECCEEEEECCCCCCcccceEEEE-eCCCCCEeeCCCCCCccccCe-----EEEECCEEEEECCcCCCccc
Confidence 45677888999999987 22 12356666 334489999887775432211 22236775666543
Q ss_pred CcEEEEECCCCeEEEee
Q 018593 312 KQVLVYHRNGRLWKEMY 328 (353)
Q Consensus 312 ~~~~~yd~~~~~~~~v~ 328 (353)
..+..||+++++|+.+.
T Consensus 267 ~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 267 ASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp CCEEEEETTTTEEEECS
T ss_pred ccEEEEcCCCCeEEECC
Confidence 23999999999999985
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.60 E-value=1.3e-13 Score=120.85 Aligned_cols=193 Identities=11% Similarity=0.060 Sum_probs=134.3
Q ss_pred CceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEE
Q 018593 106 MGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWR 185 (353)
Q Consensus 106 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~ 185 (353)
...+.++||.+++|..+++++.+ ...+.. ... +-+++++|.. . ......+++||..+++|+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~-----~~~-----~~~lyv~GG~---~--~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEK----RRDAAC-----VFW-----DNVVYILGGS---Q--LFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCC----CBSCEE-----EEE-----TTEEEEECCB---S--SSBCCEEEEEETTTTEEE
T ss_pred CceEEEecCCCCCEecCCCCCcc----cceeEE-----EEE-----CCEEEEEeCC---C--CCCcceEEEEeCCCCeEE
Confidence 56899999999999999988765 221111 111 1257777631 1 223568889999999999
Q ss_pred EeeeccccceeeeeecCceEEEcceEEeeecCC------CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEE
Q 018593 186 KFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC------SFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVI 258 (353)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~------~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v 258 (353)
.. +++ | ..+.....+.++|.||.+++.. ..+..||+.+++|+.+ ++|... ....++..+|+|+++
T Consensus 84 ~~---~~~-p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~ 155 (306)
T 3ii7_A 84 SK---LGP-P-TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR---CSHGMVEANGLIYVC 155 (306)
T ss_dssp EE---ECC-S-SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEE
T ss_pred EC---CCC-C-ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc---ceeEEEEECCEEEEE
Confidence 99 555 3 3345566788899999998743 5699999999999998 666655 456778889999999
Q ss_pred Ee-c--CC----eEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC------CcEEEEECCCCeEE
Q 018593 259 EI-S--DE----WMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH------KQVLVYHRNGRLWK 325 (353)
Q Consensus 259 ~~-~--~~----~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~yd~~~~~~~ 325 (353)
++ . .. .-++|.+ +..+.+|+.+..++.+..... .+..++.++++++. ..+..||+++++|+
T Consensus 156 GG~~~~~~~~~~~~~~~~y-d~~~~~W~~~~~~p~~r~~~~-----~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 156 GGSLGNNVSGRVLNSCEVY-DPATETWTELCPMIEARKNHG-----LVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp CCEESCTTTCEECCCEEEE-ETTTTEEEEECCCSSCCBSCE-----EEEETTEEEEECCEETTEEBCCEEEEETTTTEEE
T ss_pred CCCCCCCCcccccceEEEe-CCCCCeEEECCCccchhhcce-----EEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEE
Confidence 87 2 11 3456666 434489999987765432211 22236665555432 34999999999999
Q ss_pred Eeeeec
Q 018593 326 EMYSVK 331 (353)
Q Consensus 326 ~v~~~~ 331 (353)
.+..+.
T Consensus 230 ~~~~~p 235 (306)
T 3ii7_A 230 MVSPMP 235 (306)
T ss_dssp ECCCCS
T ss_pred ECCCCC
Confidence 996554
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.56 E-value=7.1e-13 Score=115.75 Aligned_cols=194 Identities=12% Similarity=0.128 Sum_probs=133.5
Q ss_pred CceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCc--
Q 018593 106 MGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNR-- 183 (353)
Q Consensus 106 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~-- 183 (353)
...+.++||.+++|..+++++.+ ... .. +... +-+++.+|.. . .......+++||..+++
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~----r~~--~~---~~~~-----~~~l~v~GG~---~-~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRK----RRY--VA---SVSL-----HDRIYVIGGY---D-GRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSC----CBS--CE---EEEE-----TTEEEEECCB---C-SSCBCCCEEEEETTCCTTC
T ss_pred eeEEEEEcCCCCeEEeCCCCChh----hcc--cc---EEEE-----CCEEEEEcCC---C-CCccCceEEEEECCCCCCC
Confidence 35789999999999999987765 211 11 1111 1267777631 1 11224578899999999
Q ss_pred -EEEeeeccccceeeeeecCceEEEcceEEeeecCC-----CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEE
Q 018593 184 -WRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC-----SFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLS 256 (353)
Q Consensus 184 -W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~-----~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~ 256 (353)
|+.. +++ |. .+.....+.++|.+|.+++.. ..+..||+.+++|+.+ ++|... ....++..+|+|+
T Consensus 92 ~W~~~---~~~-p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iy 163 (301)
T 2vpj_A 92 VWYSV---APM-NV-RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR---EGAGLVVASGVIY 163 (301)
T ss_dssp CCEEE---CCC-SS-CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC---BSCEEEEETTEEE
T ss_pred eeEEC---CCC-CC-CccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc---ccceEEEECCEEE
Confidence 9999 555 32 355566888899999998743 4799999999999999 677655 4566778899999
Q ss_pred EEEe-cC--CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC------CcEEEEECCCCeEEEe
Q 018593 257 VIEI-SD--EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH------KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 257 ~v~~-~~--~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~yd~~~~~~~~v 327 (353)
++++ .. ..-++|.+ +..+.+|+++..++.+.... . .+..++.++++++. ..+..||+++++|+.+
T Consensus 164 v~GG~~~~~~~~~~~~~-d~~~~~W~~~~~~p~~r~~~----~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 237 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKY-DPHTGHWTNVTPMATKRSGA----G-VALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV 237 (301)
T ss_dssp EECCBCSSCBCCCEEEE-ETTTTEEEEECCCSSCCBSC----E-EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred EECCCCCCcccceEEEE-eCCCCcEEeCCCCCcccccc----e-EEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC
Confidence 9987 22 12346666 33448999997776543221 1 22236675556543 3499999999999999
Q ss_pred eeec
Q 018593 328 YSVK 331 (353)
Q Consensus 328 ~~~~ 331 (353)
..+.
T Consensus 238 ~~~p 241 (301)
T 2vpj_A 238 TSMT 241 (301)
T ss_dssp CCCS
T ss_pred CCCC
Confidence 7654
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.55 E-value=5e-13 Score=116.79 Aligned_cols=193 Identities=13% Similarity=0.140 Sum_probs=132.8
Q ss_pred ceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEE
Q 018593 107 GVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRK 186 (353)
Q Consensus 107 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~ 186 (353)
..+.++||.+++|..++++|.+ ...+.. ... +-+++++|.. . .......+++||..+++|+.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~----r~~~~~-----~~~-----~~~lyv~GG~---~-~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSR----RCRAGM-----VYM-----AGLVFAVGGF---N-GSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSC----CBSCEE-----EEE-----TTEEEEESCB---C-SSSBCCCEEEEETTTTEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcc----cccceE-----EEE-----CCEEEEEeCc---C-CCccccceEEECCCCCceee
Confidence 5688999999999999887765 221111 111 2267777631 1 11224578899999999999
Q ss_pred eeeccccceeeeeecCceEEEcceEEeeecCC-----CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEEEe
Q 018593 187 FVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC-----SFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVIEI 260 (353)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~-----~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~ 260 (353)
. +++ | ..+.....+.++|.+|.+++.. ..+..||+.+++|+.+ ++|... ....++..+|+|+++++
T Consensus 92 ~---~~~-p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG 163 (302)
T 2xn4_A 92 V---ANM-R-DRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR---SSVGVGVVGGLLYAVGG 163 (302)
T ss_dssp E---CCC-S-SCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECC
T ss_pred C---CCC-C-ccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc---cCceEEEECCEEEEEeC
Confidence 9 555 3 2345566788899999998743 4689999999999999 666554 45667888999999987
Q ss_pred -cC-C---eEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC------CcEEEEECCCCeEEEeee
Q 018593 261 -SD-E---WMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH------KQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 261 -~~-~---~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~yd~~~~~~~~v~~ 329 (353)
.. . .-++|.+ +..+.+|+.+..++.+.... . .+..++.++++++. +.+..||+++++|+.+..
T Consensus 164 ~~~~~~~~~~~~~~y-d~~~~~W~~~~~~p~~r~~~----~-~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 237 (302)
T 2xn4_A 164 YDVASRQCLSTVECY-NATTNEWTYIAEMSTRRSGA----G-VGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD 237 (302)
T ss_dssp EETTTTEECCCEEEE-ETTTTEEEEECCCSSCCBSC----E-EEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC
T ss_pred CCCCCCccccEEEEE-eCCCCcEEECCCCccccccc----c-EEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC
Confidence 21 1 2346666 33448999998777543221 1 22336775666543 349999999999999976
Q ss_pred ec
Q 018593 330 VK 331 (353)
Q Consensus 330 ~~ 331 (353)
+.
T Consensus 238 ~~ 239 (302)
T 2xn4_A 238 MN 239 (302)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.55 E-value=1.9e-13 Score=119.96 Aligned_cols=198 Identities=12% Similarity=0.070 Sum_probs=133.0
Q ss_pred CceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEE
Q 018593 106 MGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWR 185 (353)
Q Consensus 106 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~ 185 (353)
...+.++||.+++|..++++|.+ ...+.. ... +-+++.+|..............+++||..+++|+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~-----~~~-----~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVP----RSGLAG-----CVV-----GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSC----CBSCEE-----EEE-----TTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred cceEEEEcCCCCeEeECCCCCcc----cccceE-----EEE-----CCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 45789999999999999887765 221111 111 1267777532100000111357889999999999
Q ss_pred EeeeccccceeeeeecCceEEEcceEEeeecCC-----CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEEE
Q 018593 186 KFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC-----SFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVIE 259 (353)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~-----~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~ 259 (353)
.. +++ |. .+.....+.++|.||.+++.. ..+..||+.+++|+.+ ++|... .....+..+|+|++++
T Consensus 104 ~~---~~~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~G 175 (308)
T 1zgk_A 104 PC---APM-SV-PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRR---IGVGVAVLNRLLYAVG 175 (308)
T ss_dssp EC---CCC-SS-CCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEEC
T ss_pred EC---CCC-Cc-CccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccc---cceEEEEECCEEEEEe
Confidence 99 555 32 355566788899999998732 4799999999999998 666555 4566778899999998
Q ss_pred e-cC--CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC------CcEEEEECCCCeEEEeeee
Q 018593 260 I-SD--EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH------KQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 260 ~-~~--~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~yd~~~~~~~~v~~~ 330 (353)
+ .. ..-++|.+ +..+.+|+.+..++.+..... .+..++.++++++. ..+..||+++++|+.+..+
T Consensus 176 G~~~~~~~~~~~~y-d~~~~~W~~~~~~p~~r~~~~-----~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 249 (308)
T 1zgk_A 176 GFDGTNRLNSAECY-YPERNEWRMITAMNTIRSGAG-----VCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM 249 (308)
T ss_dssp CBCSSCBCCCEEEE-ETTTTEEEECCCCSSCCBSCE-----EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC
T ss_pred CCCCCCcCceEEEE-eCCCCeEeeCCCCCCccccce-----EEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC
Confidence 7 21 12346655 334489999877775432211 22236775556543 3499999999999999755
Q ss_pred c
Q 018593 331 K 331 (353)
Q Consensus 331 ~ 331 (353)
.
T Consensus 250 p 250 (308)
T 1zgk_A 250 K 250 (308)
T ss_dssp S
T ss_pred C
Confidence 4
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.52 E-value=7e-13 Score=118.73 Aligned_cols=216 Identities=12% Similarity=0.048 Sum_probs=135.3
Q ss_pred ecCeeEEeeecCCCceEEEEccc--ccceeeccCCC-CCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCC-CC
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPM--TREWKLLPKSR-ERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGH-RP 168 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~--t~~~~~LP~~~-~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~-~~ 168 (353)
..+|.+++........++++||. +++|..++++| .+ ...+.. ...+ -+|+++|....... ..
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~----R~~~~~-----~~~~-----~~lyv~GG~~~~~~~~~ 82 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGP----RDQATS-----AFID-----GNLYVFGGIGKNSEGLT 82 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCC----CBSCEE-----EEET-----TEEEEECCEEECTTSCE
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCc----CccceE-----EEEC-----CEEEEEcCCCCCCCccc
Confidence 33676766543344689999998 49999999877 44 211111 1111 26777763200000 01
Q ss_pred CCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCC------------------------------
Q 018593 169 DGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC------------------------------ 218 (353)
Q Consensus 169 ~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~------------------------------ 218 (353)
.....+++||..+++|+.. +.+ +...+.....+..+|+||.+++..
T Consensus 83 ~~~~~v~~yd~~~~~W~~~---~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 83 QVFNDVHKYNPKTNSWVKL---MSH-APMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp EECCCEEEEETTTTEEEEC---SCC-CSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred eeeccEEEEeCCCCcEEEC---CCC-CCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 1145789999999999999 555 323344455677999999998742
Q ss_pred ---------CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEEEe-c-C--CeEEEEEEec-CCCCCeEEEEe
Q 018593 219 ---------SFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVIEI-S-D--EWMETWVLKD-YYRDEWHSVDK 283 (353)
Q Consensus 219 ---------~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~-~-~--~~~~vw~l~~-~~~~~W~~~~~ 283 (353)
..+..||+.+++|+.+ ++|.... ....++..+|+|+++++ . . ..-++|.++- .++.+|+.+..
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT--AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC--BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCCc--ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC
Confidence 3799999999999999 6775431 23677888999999977 2 1 1335666642 24489999887
Q ss_pred eccccccCccceeeeeecCCcEEEEEeC-----------------------CcEEEEECCCCeEEEeeeec
Q 018593 284 VSLRCIKGMVPSIFPISQTREYVFLATH-----------------------KQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 284 i~~~~~~~~~~~~~~~~~~~~~v~~~~~-----------------------~~~~~yd~~~~~~~~v~~~~ 331 (353)
++.+.... ... ++..++.++++++. ..+..||+++++|+.+..+.
T Consensus 237 ~~~~~~~~--~~~-~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p 304 (357)
T 2uvk_A 237 VSSPDGVA--GGF-AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS 304 (357)
T ss_dssp SSTTTCCB--SCE-EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS
T ss_pred CCCCcccc--cce-EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCC
Confidence 76532111 111 23336675555542 14789999999999997665
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.52 E-value=1.6e-12 Score=114.27 Aligned_cols=198 Identities=14% Similarity=0.070 Sum_probs=130.4
Q ss_pred ceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCC--cceEEEEEcCCCcE
Q 018593 107 GVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDG--TFKCLVFDSESNRW 184 (353)
Q Consensus 107 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~--~~~~~vy~s~~~~W 184 (353)
..+.++||.|++|.. ++++.+ ..+... +... .+-+++++|........... ...+++||..+++|
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p----~~r~~~----~~~~----~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQ----VPKNHV----SLVT----KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCC----SCSSEE----EEEC----TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred CceEEECCCCCeEec-CCCCCC----CCccce----EEEE----ECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 689999999999986 444332 111111 1111 12256666532110011111 23488999999999
Q ss_pred EEeeeccccceeeeeecCceEEEcceEEeeecC----C----CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEE
Q 018593 185 RKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDS----C----SFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCL 255 (353)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~----~----~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L 255 (353)
+.. +++ | ..+.....+.++|.||.+++. . ..+..||+.+++|+.+ ++|... ....++..+|+|
T Consensus 80 ~~~---~~~-p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~i 151 (315)
T 4asc_A 80 LGM---PPL-P-SPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV---YGHTVLSHMDLV 151 (315)
T ss_dssp EEC---CCB-S-SCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEE
T ss_pred EEC---CCC-C-cchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc---cceeEEEECCEE
Confidence 998 555 3 345566688899999999882 1 5699999999999998 667655 556778899999
Q ss_pred EEEEec-C---CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC------cEEEEECCCCeEE
Q 018593 256 SVIEIS-D---EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK------QVLVYHRNGRLWK 325 (353)
Q Consensus 256 ~~v~~~-~---~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~yd~~~~~~~ 325 (353)
+++++. . ..-++|.+ +..+.+|+++..+|.+..... ++..++.++++++.. .+..||+++++|+
T Consensus 152 yv~GG~~~~~~~~~~~~~y-d~~~~~W~~~~~~p~~r~~~~-----~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVY-DPKKFEWKELAPMQTARSLFG-----ATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp EEECCBCTTSCBCCCEEEE-ETTTTEEEECCCCSSCCBSCE-----EEEETTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred EEEeCCCCCCcccceEEEE-eCCCCeEEECCCCCCchhceE-----EEEECCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 999872 1 12356666 334489999887775432221 223367766666532 3999999999999
Q ss_pred Eeeeec
Q 018593 326 EMYSVK 331 (353)
Q Consensus 326 ~v~~~~ 331 (353)
.+..+.
T Consensus 226 ~~~~~p 231 (315)
T 4asc_A 226 PFEAFP 231 (315)
T ss_dssp EECCCS
T ss_pred ECCCCC
Confidence 997654
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.46 E-value=3.6e-12 Score=112.26 Aligned_cols=206 Identities=13% Similarity=0.128 Sum_probs=130.4
Q ss_pred eeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCC--CCcce
Q 018593 96 GLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRP--DGTFK 173 (353)
Q Consensus 96 Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~--~~~~~ 173 (353)
+.+++.. .....++||.+++|...+. +.+ ..+... +... .+-+|+++|....-.... .....
T Consensus 16 ~~i~~~G---G~~~~~yd~~~~~W~~~~~-~~~----~~r~~~----~~~~----~~~~lyv~GG~~~~~~~~~~~~~~~ 79 (318)
T 2woz_A 16 DLILLVN---DTAAVAYDPMENECYLTAL-AEQ----IPRNHS----SIVT----QQNQVYVVGGLYVDEENKDQPLQSY 79 (318)
T ss_dssp EEEEEEC---SSEEEEEETTTTEEEEEEE-CTT----SCSSEE----EEEC----SSSCEEEEESSCC-------CCCBE
T ss_pred chhhhcc---ccceEEECCCCCceecccC-Ccc----CCccce----EEEE----ECCEEEEECCcccCccccCCCcccc
Confidence 4454442 2457899999999998443 221 001111 1111 123577765310000000 01224
Q ss_pred EEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCC-------CEEEEEECCCceEEEe-eCCCCCCCCCc
Q 018593 174 CLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC-------SFILALDLEGDVWRKI-SLPDKVGSESR 245 (353)
Q Consensus 174 ~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~-------~~i~~~D~~~~~~~~~-~~P~~~~~~~~ 245 (353)
+++||..+++|+.. +++ |. .+.....+.++|.||.+++.. ..+.+||+.+++|+.+ ++|... ..
T Consensus 80 ~~~~d~~~~~W~~~---~~~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~ 151 (318)
T 2woz_A 80 FFQLDNVSSEWVGL---PPL-PS-ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV---YG 151 (318)
T ss_dssp EEEEETTTTEEEEC---SCB-SS-CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE---ES
T ss_pred EEEEeCCCCcEEEC---CCC-Cc-cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc---cc
Confidence 88999999999998 555 32 345566888899999998742 4699999999999998 677655 45
Q ss_pred eeEEEECCEEEEEEe-c-C--CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC------CcEE
Q 018593 246 SYLLECDGCLSVIEI-S-D--EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH------KQVL 315 (353)
Q Consensus 246 ~~l~~~~g~L~~v~~-~-~--~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~ 315 (353)
..++..+|+|+++++ . . ..-++|.+ +..+.+|..+..++.+..... .+..++.++++++. ..+.
T Consensus 152 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~y-d~~~~~W~~~~~~p~~r~~~~-----~~~~~~~iyv~GG~~~~~~~~~~~ 225 (318)
T 2woz_A 152 HNVISHNGMIYCLGGKTDDKKCTNRVFIY-NPKKGDWKDLAPMKTPRSMFG-----VAIHKGKIVIAGGVTEDGLSASVE 225 (318)
T ss_dssp CEEEEETTEEEEECCEESSSCBCCCEEEE-ETTTTEEEEECCCSSCCBSCE-----EEEETTEEEEEEEEETTEEEEEEE
T ss_pred cEEEEECCEEEEEcCCCCCCCccceEEEE-cCCCCEEEECCCCCCCcccce-----EEEECCEEEEEcCcCCCCccceEE
Confidence 567779999999987 1 1 12346666 434488999987775432211 22236776666543 2388
Q ss_pred EEECCCCeEEEeeeec
Q 018593 316 VYHRNGRLWKEMYSVK 331 (353)
Q Consensus 316 ~yd~~~~~~~~v~~~~ 331 (353)
.||+++++|+.+..+.
T Consensus 226 ~yd~~~~~W~~~~~~p 241 (318)
T 2woz_A 226 AFDLKTNKWEVMTEFP 241 (318)
T ss_dssp EEETTTCCEEECCCCS
T ss_pred EEECCCCeEEECCCCC
Confidence 9999999999997654
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.42 E-value=5.6e-11 Score=106.27 Aligned_cols=200 Identities=12% Similarity=0.113 Sum_probs=123.4
Q ss_pred ceEEEEcccccceeeccCCC-CCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccC--------------------
Q 018593 107 GVYYVCNPMTREWKLLPKSR-ERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFG-------------------- 165 (353)
Q Consensus 107 ~~~~v~NP~t~~~~~LP~~~-~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~-------------------- 165 (353)
..+.++||.|++|..+++++ .+ +....+ ...+ -+++++|......
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~------r~~~~~---~~~~-----~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMG------MAGHVT---FVHN-----GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDK 151 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSC------CSSEEE---EEET-----TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ccEEEEeCCCCcEEECCCCCCcc------cccceE---EEEC-----CEEEEEeCcCCCcCcccccchhhcCCcccchhh
Confidence 57899999999999999876 32 112211 1121 2677776311000
Q ss_pred -------C---CCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCC------CEEEEEEC--C
Q 018593 166 -------H---RPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC------SFILALDL--E 227 (353)
Q Consensus 166 -------~---~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~------~~i~~~D~--~ 227 (353)
. .......+++||..+++|+.. ..+ |...+.....+.+++.||.+++.. ..+..||+ .
T Consensus 152 ~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~---~~~-p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~ 227 (357)
T 2uvk_A 152 INAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA---GES-PWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGN 227 (357)
T ss_dssp HHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE---EEC-SSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC--
T ss_pred hhhhhccccccccCCcccEEEEeCCCCcEEEC---CCC-CCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCC
Confidence 0 000135899999999999999 444 433344456888999999998632 46788887 8
Q ss_pred CceEEEe-eCCCCCCCCCceeEEEECCEEEEEEe-c-C------------------CeEEEEEEecCCCCCeEEEEeecc
Q 018593 228 GDVWRKI-SLPDKVGSESRSYLLECDGCLSVIEI-S-D------------------EWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 228 ~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~-~-~------------------~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
+++|+.+ ++|..... ....++..+|+|+++++ . . ....+|.+ +.++.+|.++..++.
T Consensus 228 ~~~W~~~~~~~~~~~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~y-d~~~~~W~~~~~~p~ 305 (357)
T 2uvk_A 228 NLKWNKLAPVSSPDGV-AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIH-LWHNGKWDKSGELSQ 305 (357)
T ss_dssp -CEEEECCCSSTTTCC-BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEE-ECC---CEEEEECSS
T ss_pred CCcEEecCCCCCCccc-ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEE-ecCCCceeeCCCCCC
Confidence 9999998 55443321 34457889999999987 1 1 01345555 334489999988876
Q ss_pred ccccCccceeeeeecCCcEEEEEeCC-------cEEEEECCCCeEEEeeeec
Q 018593 287 RCIKGMVPSIFPISQTREYVFLATHK-------QVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~v~~~~~~-------~~~~yd~~~~~~~~v~~~~ 331 (353)
+.... . ++..++.++++++.+ .++.+++++++|.......
T Consensus 306 ~r~~~----~-~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 306 GRAYG----V-SLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp CCBSS----E-EEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred Ccccc----e-eEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 43322 1 233477777777642 2889999999999885443
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.25 E-value=4.9e-10 Score=108.82 Aligned_cols=206 Identities=9% Similarity=0.063 Sum_probs=127.4
Q ss_pred cCeeEEeeec---CCCceEEEEcccccceeecc-CC-----CCCCCccccCCCceeEEEEEeecCCCceEEEEEeeeccc
Q 018593 94 CNGLLCCSSI---PEMGVYYVCNPMTREWKLLP-KS-----RERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAF 164 (353)
Q Consensus 94 ~~Gll~~~~~---~~~~~~~v~NP~t~~~~~LP-~~-----~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~ 164 (353)
.+|.+++.+. .....+.++||.+++|..++ +. +.+ .. ... +..... +-+++++|..
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~----R~--~hs---~~~~~~---~~~lyv~GG~--- 460 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVA----RM--CHT---FTTISR---NNQLLLIGGR--- 460 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCC----CB--SCE---EEEETT---TTEEEEECCB---
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcc----cc--ceE---EEEEcc---CCEEEEEcCC---
Confidence 4566655532 12357999999999999998 53 222 11 111 111100 2268887632
Q ss_pred CCCCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE-cceEEeeecCC--CEEEEEECCCceEEEee----CC
Q 018593 165 GHRPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV-NGALHWLTDSC--SFILALDLEGDVWRKIS----LP 237 (353)
Q Consensus 165 ~~~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~-~g~ly~~~~~~--~~i~~~D~~~~~~~~~~----~P 237 (353)
.........+++||..+++|+.. +++ | ..+..+..+.+ +|.||.+++.. ..+..||+.+++|+.++ +|
T Consensus 461 ~~~~~~~~dv~~yd~~t~~W~~~---~~~-p-~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p 535 (695)
T 2zwa_A 461 KAPHQGLSDNWIFDMKTREWSMI---KSL-S-HTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFF 535 (695)
T ss_dssp SSTTCBCCCCEEEETTTTEEEEC---CCC-S-BCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGG
T ss_pred CCCCCccccEEEEeCCCCcEEEC---CCC-C-CCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCC
Confidence 11111245689999999999999 555 3 33555556665 99999998764 26999999999999984 55
Q ss_pred CCCCCCCceeEEEEC---CEEEEEEec--C---CeEEEEEEecCCCCC------eEEEEeecc-ccccCccceeeeeecC
Q 018593 238 DKVGSESRSYLLECD---GCLSVIEIS--D---EWMETWVLKDYYRDE------WHSVDKVSL-RCIKGMVPSIFPISQT 302 (353)
Q Consensus 238 ~~~~~~~~~~l~~~~---g~L~~v~~~--~---~~~~vw~l~~~~~~~------W~~~~~i~~-~~~~~~~~~~~~~~~~ 302 (353)
... .....+..+ |+|+++++. . ..-++|.++- .+.. |+.+..++. +.... .+ .+..+
T Consensus 536 ~~r---~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~-~~~~w~~~~~W~~~~~~p~~~R~~~---~~-~~~~~ 607 (695)
T 2zwa_A 536 QNS---LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKY-DAENATEPITVIKKLQHPLFQRYGS---QI-KYITP 607 (695)
T ss_dssp GSC---CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEE-CTTCSSCCEEEEEEEECGGGCCBSC---EE-EEEET
T ss_pred Ccc---cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEc-cCCccccceEEEEcCCCCCCCcccc---eE-EEeCC
Confidence 444 333434444 899999872 1 1234565532 2245 898887653 32221 12 22223
Q ss_pred CcEEEEEeC---------CcEEEEECCCCeEEEe
Q 018593 303 REYVFLATH---------KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 303 ~~~v~~~~~---------~~~~~yd~~~~~~~~v 327 (353)
+.++++++. ..+..||+++++|+.+
T Consensus 608 ~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~ 641 (695)
T 2zwa_A 608 RKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSI 641 (695)
T ss_dssp TEEEEECCBCSSCCCCTTTSEEEEETTTTEEEEC
T ss_pred CEEEEECCccCCCCCCCCCeEEEEECCCCeEEEe
Confidence 776666542 2399999999999965
No 16
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.15 E-value=2.6e-11 Score=76.02 Aligned_cols=41 Identities=32% Similarity=0.598 Sum_probs=38.2
Q ss_pred CCCCCHHHHHHHHhcCCchhhhhhhccchhhhhhcCChHHH
Q 018593 1 MGFFPDEVIQQILARLPVKSLFRTKTVCKLWNKLTSDKYFI 41 (353)
Q Consensus 1 ~~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~li~~~~F~ 41 (353)
+..||+|++.+||++||.+++.++++|||+|+.++.++.|-
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 46899999999999999999999999999999999988764
No 17
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.07 E-value=8.2e-11 Score=100.17 Aligned_cols=48 Identities=23% Similarity=0.476 Sum_probs=45.1
Q ss_pred CCCCCHHHHHHHHhcCCchhhh-hhhccchhhhhhcCChHHHHHHhhcc
Q 018593 1 MGFFPDEVIQQILARLPVKSLF-RTKTVCKLWNKLTSDKYFIRLYNEVS 48 (353)
Q Consensus 1 ~~~LP~dll~~IL~rLp~~~l~-r~r~Vck~W~~li~~~~F~~~~~~~~ 48 (353)
|..||+|+|.+||++||+++|+ ++++|||+|+++++++.|.+.+.++.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4689999999999999999999 99999999999999999999987765
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.99 E-value=6.8e-07 Score=81.93 Aligned_cols=231 Identities=12% Similarity=0.118 Sum_probs=117.6
Q ss_pred CCCCCHHHHHHHHhcCCchhhhhhhccchhhhhhcCChHHHHHHhhccCC-CCceEEeec-ccc----cce-eEEE----
Q 018593 1 MGFFPDEVIQQILARLPVKSLFRTKTVCKLWNKLTSDKYFIRLYNEVSSK-NPMLLVQIS-DLI----ESK-GVIC---- 69 (353)
Q Consensus 1 ~~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~li~~~~F~~~~~~~~~~-~~~~~~~~~-~~~----~~~-~~~~---- 69 (353)
++.||+|++.+||++|++++|.++++|||+|+.++.++.+-+........ .+...-... ... ..+ ..+.
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~~~ 98 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHR 98 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhhhh
Confidence 46799999999999999999999999999999999998777765433221 111000000 000 000 0000
Q ss_pred ------ecCCCCceeeecCCCCCc-eeEeeecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEE
Q 018593 70 ------VDNWRGVTEISLDFLHDR-VKVRASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLV 142 (353)
Q Consensus 70 ------~~~~~~~~~~~~~~~~~~-~~~~~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~ 142 (353)
........ .+...... ...+...+.+++.. ...+.+.|||..+++....-... .....
T Consensus 99 ~~~~w~~~~~~~~~--~l~~h~~~v~~~~~~~g~~l~sg--~~dg~i~vwd~~~~~~~~~~~~h--------~~~v~--- 163 (445)
T 2ovr_B 99 IDTNWRRGELKSPK--VLKGHDDHVITCLQFCGNRIVSG--SDDNTLKVWSAVTGKCLRTLVGH--------TGGVW--- 163 (445)
T ss_dssp HHHHHHHSCCCCCE--EEECSTTSCEEEEEEETTEEEEE--ETTSCEEEEETTTCCEEEECCCC--------SSCEE---
T ss_pred hhhcccCCCcceeE--EecccCCCcEEEEEEcCCEEEEE--ECCCcEEEEECCCCcEEEEEcCC--------CCCEE---
Confidence 00000000 01111111 12233334444444 45678999999888755422111 11122
Q ss_pred EEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEE
Q 018593 143 GLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFIL 222 (353)
Q Consensus 143 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~ 222 (353)
.+.++. . .++..+ ....+.+|+..++.-... .... .. .-..+..++.....+..+..+.
T Consensus 164 ~~~~~~---~-~l~s~~----------~dg~i~vwd~~~~~~~~~--~~~h-~~----~v~~~~~~~~~l~s~s~dg~i~ 222 (445)
T 2ovr_B 164 SSQMRD---N-IIISGS----------TDRTLKVWNAETGECIHT--LYGH-TS----TVRCMHLHEKRVVSGSRDATLR 222 (445)
T ss_dssp EEEEET---T-EEEEEE----------TTSCEEEEETTTTEEEEE--ECCC-SS----CEEEEEEETTEEEEEETTSEEE
T ss_pred EEEecC---C-EEEEEe----------CCCeEEEEECCcCcEEEE--ECCC-CC----cEEEEEecCCEEEEEeCCCEEE
Confidence 344442 2 233221 145788899887743221 0100 00 0113333444444444445899
Q ss_pred EEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEec
Q 018593 223 ALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKD 272 (353)
Q Consensus 223 ~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~ 272 (353)
.+|+.+.+.... ... . .....+..+|.+.+++..+..+.+|.++.
T Consensus 223 ~wd~~~~~~~~~~~~~--~---~~v~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 223 VWDIETGQCLHVLMGH--V---AAVRCVQYDGRRVVSGAYDFMVKVWDPET 268 (445)
T ss_dssp EEESSSCCEEEEEECC--S---SCEEEEEECSSCEEEEETTSCEEEEEGGG
T ss_pred EEECCCCcEEEEEcCC--c---ccEEEEEECCCEEEEEcCCCEEEEEECCC
Confidence 999987654322 221 1 12333344777766666777888986543
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.98 E-value=4.6e-06 Score=76.65 Aligned_cols=41 Identities=20% Similarity=0.365 Sum_probs=36.6
Q ss_pred CCCCHHHHHHHHhcCCchhhhhhhccchhhhhhcCC-hHHHH
Q 018593 2 GFFPDEVIQQILARLPVKSLFRTKTVCKLWNKLTSD-KYFIR 42 (353)
Q Consensus 2 ~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~li~~-~~F~~ 42 (353)
..||+|++.+||++||+++|.+++.|||+|+.++.+ +..-+
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~ 57 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWK 57 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 359999999999999999999999999999999987 54433
No 20
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.97 E-value=7.9e-09 Score=99.97 Aligned_cols=217 Identities=6% Similarity=-0.068 Sum_probs=124.6
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
..+|.+++........+.++||.|++|..+++++.+ +..+.. ... .+-||+++|.. ........
T Consensus 251 ~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~----R~~~s~-----~~~----~dg~iyv~GG~---~~~~~~~~ 314 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA----RGYQSS-----ATM----SDGRVFTIGGS---WSGGVFEK 314 (656)
T ss_dssp CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC----CSSCEE-----EEC----TTSCEEEECCC---CCSSSCCC
T ss_pred CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcc----ccccce-----EEe----cCCeEEEEeCc---ccCCcccc
Confidence 357777777533345899999999999999988765 221111 111 12268887621 11111246
Q ss_pred eEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCC---------CEEEEEECCCceEEEe-eCCCC---
Q 018593 173 KCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC---------SFILALDLEGDVWRKI-SLPDK--- 239 (353)
Q Consensus 173 ~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~---------~~i~~~D~~~~~~~~~-~~P~~--- 239 (353)
.+++||..+++|+..+..... |.........+..++.+|.+++.. ..+..||+.+++|... ..+..
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~-p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVN-PMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSG-GGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred cceEeCCCCCcceeCCCcccc-ccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 789999999999987321111 111111122344566666665321 4789999999998654 11111
Q ss_pred --CCCCCceeEE--EECCEEEEEEecC--------C-eEEEEEEecCCCCCeEEEE--eeccccccCccceeeeeecCCc
Q 018593 240 --VGSESRSYLL--ECDGCLSVIEISD--------E-WMETWVLKDYYRDEWHSVD--KVSLRCIKGMVPSIFPISQTRE 304 (353)
Q Consensus 240 --~~~~~~~~l~--~~~g~L~~v~~~~--------~-~~~vw~l~~~~~~~W~~~~--~i~~~~~~~~~~~~~~~~~~~~ 304 (353)
........++ ..+|+|+++++.. . ...++.. +.+...|.++. .|+.+.... .. .+..+++
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~y-d~~~~~W~~~~~~~mp~~R~~~---~~-~~l~~g~ 468 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLG-EPGTSPNTVFASNGLYFARTFH---TS-VVLPDGS 468 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECC-STTSCCEEEECTTCCSSCCBSC---EE-EECTTSC
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcC-CCCCCCeeEEccCCCCCCcccC---Ce-EECCCCC
Confidence 0000122222 2589999998721 1 1123322 33447899886 666533221 12 3334788
Q ss_pred EEEEEeC------------CcEEEEECCCCeEEEeeeec
Q 018593 305 YVFLATH------------KQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 305 ~v~~~~~------------~~~~~yd~~~~~~~~v~~~~ 331 (353)
++++++. ..+.+||+++++|+.+..+.
T Consensus 469 i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 469 TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS 507 (656)
T ss_dssp EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred EEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC
Confidence 6666642 23899999999999986553
No 21
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.85 E-value=6.3e-07 Score=81.95 Aligned_cols=43 Identities=33% Similarity=0.556 Sum_probs=37.6
Q ss_pred CCCCHH----HHHHHHhcCCchhhhhhhccchhhhhhcCChHHHHHH
Q 018593 2 GFFPDE----VIQQILARLPVKSLFRTKTVCKLWNKLTSDKYFIRLY 44 (353)
Q Consensus 2 ~~LP~d----ll~~IL~rLp~~~l~r~r~Vck~W~~li~~~~F~~~~ 44 (353)
..||+| ++..||++|++++|.++++|||+|+.++.++.+-+..
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~ 58 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKL 58 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHH
Confidence 358999 9999999999999999999999999999876654443
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.83 E-value=8.4e-08 Score=93.15 Aligned_cols=162 Identities=10% Similarity=0.090 Sum_probs=108.2
Q ss_pred EEEEEeeecccCCCCCCcceEEEEEcCCCcEEEee-ecc--ccceeeeeecCceEEE--cceEEeeecCC------CEEE
Q 018593 154 NVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRKFV-SVQ--DYYQFSIMNRNQVVFV--NGALHWLTDSC------SFIL 222 (353)
Q Consensus 154 kvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~~~-~~~--~~~~~~~~~~~~~v~~--~g~ly~~~~~~------~~i~ 222 (353)
+|+.+|. ... .....+++||..+++|+... ..+ .+ ...+..+..+.+ +|.+|.+++.. ..+.
T Consensus 399 ~iyv~GG---~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~--p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~ 471 (695)
T 2zwa_A 399 DVFYMGG---SNP--YRVNEILQLSIHYDKIDMKNIEVSSSEV--PVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNW 471 (695)
T ss_dssp CEEEECC---BSS--SBCCCEEEEEECSSCEEEEECCCCCSCC--CCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCE
T ss_pred EEEEECC---CCC--CCcCcEEEEECCCCeEEEeccCCCCCCC--CccccceEEEEEccCCEEEEEcCCCCCCCccccEE
Confidence 4777763 211 23456889999999999984 211 12 234556668888 99999998753 4689
Q ss_pred EEECCCceEEEe-eCCCCCCCCCceeEEEE-CCEEEEEEe-cCCeEEEEEEecCCCCCeEEEEe---eccccccCcccee
Q 018593 223 ALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DGCLSVIEI-SDEWMETWVLKDYYRDEWHSVDK---VSLRCIKGMVPSI 296 (353)
Q Consensus 223 ~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g~L~~v~~-~~~~~~vw~l~~~~~~~W~~~~~---i~~~~~~~~~~~~ 296 (353)
.||+.+++|+.+ ++|... .....+.. +|+|+++++ .... ++|.+ +..+..|+.+.. +|.+.... ..+
T Consensus 472 ~yd~~t~~W~~~~~~p~~R---~~h~~~~~~~~~iyv~GG~~~~~-~v~~y-d~~t~~W~~~~~~g~~p~~r~~~--~a~ 544 (695)
T 2zwa_A 472 IFDMKTREWSMIKSLSHTR---FRHSACSLPDGNVLILGGVTEGP-AMLLY-NVTEEIFKDVTPKDEFFQNSLVS--AGL 544 (695)
T ss_dssp EEETTTTEEEECCCCSBCC---BSCEEEECTTSCEEEECCBCSSC-SEEEE-ETTTTEEEECCCSSGGGGSCCBS--CEE
T ss_pred EEeCCCCcEEECCCCCCCc---ccceEEEEcCCEEEEECCCCCCC-CEEEE-ECCCCceEEccCCCCCCCcccce--eEE
Confidence 999999999998 666655 44566664 999999988 3333 67766 444589999876 44332211 112
Q ss_pred eeeecC-CcEEEEEeC--------CcEEEEECCCCe------EEEeeee
Q 018593 297 FPISQT-REYVFLATH--------KQVLVYHRNGRL------WKEMYSV 330 (353)
Q Consensus 297 ~~~~~~-~~~v~~~~~--------~~~~~yd~~~~~------~~~v~~~ 330 (353)
.+..+ +.++++++. +.+..||+++++ |+.+..+
T Consensus 545 -v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~ 592 (695)
T 2zwa_A 545 -EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH 592 (695)
T ss_dssp -EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC
T ss_pred -EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC
Confidence 22333 665656543 239999999999 8988663
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.77 E-value=8.6e-08 Score=92.70 Aligned_cols=192 Identities=13% Similarity=0.029 Sum_probs=113.6
Q ss_pred EEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecc--cCCCCCCcceEEEEEcCCCcEEE
Q 018593 109 YYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRA--FGHRPDGTFKCLVFDSESNRWRK 186 (353)
Q Consensus 109 ~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~--~~~~~~~~~~~~vy~s~~~~W~~ 186 (353)
+..+||.+++|..++++|.. .. .. ++. + .+-+++++|.... ++........+.+||..+++|+.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~------~~-~~---av~--~--~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~ 233 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV------PA-AA---AIE--P--TSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD 233 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC------CS-EE---EEE--T--TTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC
T ss_pred cccCCCCCCeeeeeccCCCC------ce-eE---EEE--e--cCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe
Confidence 34568999999998877643 11 11 111 1 1237777763211 11111123468899999999998
Q ss_pred eeeccccceeeeeecC-c-eEEEcceEEeeecCC-CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CCEEEEEEe-
Q 018593 187 FVSVQDYYQFSIMNRN-Q-VVFVNGALHWLTDSC-SFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DGCLSVIEI- 260 (353)
Q Consensus 187 ~~~~~~~~~~~~~~~~-~-~v~~~g~ly~~~~~~-~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g~L~~v~~- 260 (353)
. +.+ +....... . .+..+|+||.+++.. ..+..||+.+++|+.+ ++|..+ .....+.. +|+|+++++
T Consensus 234 ~---~~~-~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R---~~~s~~~~~dg~iyv~GG~ 306 (656)
T 1k3i_A 234 R---TVT-VTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVAR---GYQSSATMSDGRVFTIGGS 306 (656)
T ss_dssp C---EEE-ECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCC---SSCEEEECTTSCEEEECCC
T ss_pred C---ccc-CCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccc---cccceEEecCCeEEEEeCc
Confidence 8 433 22211112 1 334689999999853 5799999999999998 566554 45667777 899999987
Q ss_pred cC-----CeEEEEEEecCCCCCeEEEEeecc---ccccCccceeeeeecCCcEEEEE----------eCCcEEEEECCCC
Q 018593 261 SD-----EWMETWVLKDYYRDEWHSVDKVSL---RCIKGMVPSIFPISQTREYVFLA----------THKQVLVYHRNGR 322 (353)
Q Consensus 261 ~~-----~~~~vw~l~~~~~~~W~~~~~i~~---~~~~~~~~~~~~~~~~~~~v~~~----------~~~~~~~yd~~~~ 322 (353)
.+ ..+++| +..+++|..+..+.. ..... . . .+..++.++++. ....+..||++++
T Consensus 307 ~~~~~~~~~~e~y---d~~t~~W~~~~~~~~~p~~~~~~--~-~-~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~ 379 (656)
T 1k3i_A 307 WSGGVFEKNGEVY---SPSSKTWTSLPNAKVNPMLTADK--Q-G-LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 379 (656)
T ss_dssp CCSSSCCCCEEEE---ETTTTEEEEETTSCSGGGCCCCT--T-G-GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred ccCCcccccceEe---CCCCCcceeCCCccccccccccc--c-c-eeecCCceEEEECCCCcEEEecCccceeeeecCCc
Confidence 22 345555 444478998733221 11000 0 0 111123322222 2344899999999
Q ss_pred eEEEee
Q 018593 323 LWKEMY 328 (353)
Q Consensus 323 ~~~~v~ 328 (353)
+|....
T Consensus 380 ~w~~~~ 385 (656)
T 1k3i_A 380 GDVKSA 385 (656)
T ss_dssp CEEEEE
T ss_pred ceeecC
Confidence 987653
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.05 E-value=1.5e-06 Score=73.19 Aligned_cols=48 Identities=21% Similarity=0.254 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHhcCCchhhhhhhccchhhhhhcCChHHHHHHhhccC
Q 018593 2 GFFPDEVIQQILARLPVKSLFRTKTVCKLWNKLTSDKYFIRLYNEVSS 49 (353)
Q Consensus 2 ~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~li~~~~F~~~~~~~~~ 49 (353)
..||+|++..||+.|++++|.++.+|||+||.+..++..-+.+..+..
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 469999999999999999999999999999999999988777665543
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.61 E-value=2.4e-05 Score=68.78 Aligned_cols=39 Identities=33% Similarity=0.627 Sum_probs=35.7
Q ss_pred CCCCCHHHHHHHHhcCCchhhhhhhccchhhhhhcCChH
Q 018593 1 MGFFPDEVIQQILARLPVKSLFRTKTVCKLWNKLTSDKY 39 (353)
Q Consensus 1 ~~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~li~~~~ 39 (353)
++.||+|++.+||.+|+.+++.+++.|||+|+.++.++.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 367999999999999999999999999999999987654
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.17 E-value=0.00015 Score=68.82 Aligned_cols=34 Identities=26% Similarity=0.536 Sum_probs=29.4
Q ss_pred CCCCCHHHHHHHHhcCC-chhhhhhhccchhhhhh
Q 018593 1 MGFFPDEVIQQILARLP-VKSLFRTKTVCKLWNKL 34 (353)
Q Consensus 1 ~~~LP~dll~~IL~rLp-~~~l~r~r~Vck~W~~l 34 (353)
++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 35799999999999999 89999999999999988
No 27
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.95 E-value=0.12 Score=43.48 Aligned_cols=189 Identities=6% Similarity=-0.063 Sum_probs=96.3
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
..+|.+++.. .....++++|| +++...+..+... .... ++..|+.. +++... ....
T Consensus 107 ~~~g~l~v~~-~~~~~i~~~d~-~g~~~~~~~~~~~-------~~~~---~i~~~~~g---~l~v~~---------~~~~ 162 (299)
T 2z2n_A 107 GPNGDIWFTE-MNGNRIGRITD-DGKIREYELPNKG-------SYPS---FITLGSDN---ALWFTE---------NQNN 162 (299)
T ss_dssp CTTSCEEEEE-TTTTEEEEECT-TCCEEEEECSSTT-------CCEE---EEEECTTS---CEEEEE---------TTTT
T ss_pred CCCCCEEEEe-cCCceEEEECC-CCCEEEecCCCCC-------CCCc---eEEEcCCC---CEEEEe---------CCCC
Confidence 3467666653 34568899999 7766554322111 1111 55666532 333321 1234
Q ss_pred eEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEE
Q 018593 173 KCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLE 250 (353)
Q Consensus 173 ~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~ 250 (353)
.+.+|+. ++........... . ....+.+ +|.+|+.......|..||+ ++++..+..|.... ....+..
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~--~----~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~--~~~~i~~ 232 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPA--S----GPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNA--RPHAITA 232 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTT--C----CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC--CEEEEEE
T ss_pred EEEEEcC-CCcEEEeeCCCCC--C----cceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCC--CceeEEE
Confidence 6778887 7766554111111 0 0112333 4778776644458999999 77777766663221 2233444
Q ss_pred E-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe-CCcEEEEECCCCeEE
Q 018593 251 C-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT-HKQVLVYHRNGRLWK 325 (353)
Q Consensus 251 ~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd~~~~~~~ 325 (353)
. +|+|++.......+.++.. + .. ...+..+........+ .+ .+|. +++.+ .+.+..||+++++.+
T Consensus 233 ~~~g~l~v~~~~~~~i~~~d~---~-g~---~~~~~~~~~~~~~~~i-~~-~~g~-l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 233 GAGIDLWFTEWGANKIGRLTS---N-NI---IEEYPIQIKSAEPHGI-CF-DGET-IWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp CSTTCEEEEETTTTEEEEEET---T-TE---EEEEECSSSSCCEEEE-EE-CSSC-EEEEETTTEEEEEEEC-----
T ss_pred CCCCCEEEeccCCceEEEECC---C-Cc---eEEEeCCCCCCccceE-Ee-cCCC-EEEEecCCcEEEEEcCcccCC
Confidence 3 5888877655555555532 2 22 1222221111122334 44 6777 55654 566999999988653
No 28
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.69 E-value=0.00061 Score=64.67 Aligned_cols=32 Identities=28% Similarity=0.486 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHhcC-Cchhhhhhhccchhhhhh
Q 018593 3 FFPDEVIQQILARL-PVKSLFRTKTVCKLWNKL 34 (353)
Q Consensus 3 ~LP~dll~~IL~rL-p~~~l~r~r~Vck~W~~l 34 (353)
.||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 15 ~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 15 ATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 69999999999999 899999999999999987
No 29
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.42 E-value=0.36 Score=40.92 Aligned_cols=203 Identities=9% Similarity=-0.047 Sum_probs=100.6
Q ss_pred eecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 92 ASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 92 ~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
+..+|.+++.. .....++.+||.+++...+..... .. ++.+++... -++.. .
T Consensus 21 ~~~~~~l~~~d-~~~~~i~~~d~~~~~~~~~~~~~~----------~~---~i~~~~dG~--l~v~~------------~ 72 (297)
T 3g4e_A 21 EEVSNSLLFVD-IPAKKVCRWDSFTKQVQRVTMDAP----------VS---SVALRQSGG--YVATI------------G 72 (297)
T ss_dssp ETTTTEEEEEE-TTTTEEEEEETTTCCEEEEECSSC----------EE---EEEEBTTSS--EEEEE------------T
T ss_pred ECCCCEEEEEE-CCCCEEEEEECCCCcEEEEeCCCc----------eE---EEEECCCCC--EEEEE------------C
Confidence 34455555554 456788999999987655432211 11 566665433 22221 3
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecC-----------CCEEEEEECCCceEEEeeCCCCC
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDS-----------CSFILALDLEGDVWRKISLPDKV 240 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~-----------~~~i~~~D~~~~~~~~~~~P~~~ 240 (353)
..+.+|+.++++++........ ....+...-.+.-+|.+|+-... ...+..+|.... ...+.-. ..
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~-~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~-~~ 149 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDND-KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQ-VD 149 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTT-CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEE-ES
T ss_pred CeEEEEECCCCcEEEEEecCCC-CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeec-cc
Confidence 4788899998888766332111 01111111112225776664421 136888887643 2222100 00
Q ss_pred CCCCceeEEEE-CCE-EEEEEecCCeEEEEEEecCCCCCeEEEEee-ccccccCccceeeeeecCCcEEEEEeC--CcEE
Q 018593 241 GSESRSYLLEC-DGC-LSVIEISDEWMETWVLKDYYRDEWHSVDKV-SLRCIKGMVPSIFPISQTREYVFLATH--KQVL 315 (353)
Q Consensus 241 ~~~~~~~l~~~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~ 315 (353)
....++.. +|+ |+++......+.+|.++. ..........+ ...........+ .++.+|. +++... +.+.
T Consensus 150 ---~pngi~~spdg~~lyv~~~~~~~i~~~~~d~-~~G~~~~~~~~~~~~~~~~~p~g~-~~d~~G~-lwva~~~~~~v~ 223 (297)
T 3g4e_A 150 ---ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDL-QTGQISNRRSVYKLEKEEQIPDGM-CIDAEGK-LWVACYNGGRVI 223 (297)
T ss_dssp ---BEEEEEECTTSCEEEEEEGGGTEEEEEEECT-TTCCEEEEEEEEECCGGGCEEEEE-EEBTTSC-EEEEEETTTEEE
T ss_pred ---cccceEEcCCCCEEEEecCCCCcEEEEeccC-CCCcccCcEEEEECCCCCCCCCee-EECCCCC-EEEEEcCCCEEE
Confidence 11233333 454 666555556666665531 11333221111 111111223445 6777888 556543 3499
Q ss_pred EEECCCCeEEEeeeec
Q 018593 316 VYHRNGRLWKEMYSVK 331 (353)
Q Consensus 316 ~yd~~~~~~~~v~~~~ 331 (353)
.||+++++......+.
T Consensus 224 ~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 224 RLDPVTGKRLQTVKLP 239 (297)
T ss_dssp EECTTTCCEEEEEECS
T ss_pred EEcCCCceEEEEEECC
Confidence 9999987765544443
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.40 E-value=0.41 Score=41.31 Aligned_cols=194 Identities=9% Similarity=0.015 Sum_probs=103.7
Q ss_pred cCeeEEeeecCCCceEEEEcccccce-eeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 94 CNGLLCCSSIPEMGVYYVCNPMTREW-KLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 94 ~~Gll~~~~~~~~~~~~v~NP~t~~~-~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
.++.+++.. ...+.+.++|+.|++. ..++....+ . ++.+++. + ++++.. ....
T Consensus 52 ~~~~lyv~~-~~~~~v~viD~~t~~~~~~i~~~~~p----------~---~i~~~~~--g-~lyv~~---------~~~~ 105 (328)
T 3dsm_A 52 RDGIGWIVV-NNSHVIFAIDINTFKEVGRITGFTSP----------R---YIHFLSD--E-KAYVTQ---------IWDY 105 (328)
T ss_dssp ETTEEEEEE-GGGTEEEEEETTTCCEEEEEECCSSE----------E---EEEEEET--T-EEEEEE---------BSCS
T ss_pred ECCEEEEEE-cCCCEEEEEECcccEEEEEcCCCCCC----------c---EEEEeCC--C-eEEEEE---------CCCC
Confidence 455565554 3457899999999887 446533222 1 3444332 3 565542 0145
Q ss_pred eEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecC-CCEEEEEECCCceEEE-eeCCCCCCCCCceeEEE
Q 018593 173 KCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDS-CSFILALDLEGDVWRK-ISLPDKVGSESRSYLLE 250 (353)
Q Consensus 173 ~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~-~~~i~~~D~~~~~~~~-~~~P~~~~~~~~~~l~~ 250 (353)
.+.++|..+++-...-..... ..........+..+|.+|..... ...|.++|+.+.+... ++.+... ..+..
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~-~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~ 179 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDM-DMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQP-----TSLVM 179 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTC-CTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCB-----CCCEE
T ss_pred eEEEEECCCCeEEEEEEcCCc-cccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCc-----cceEE
Confidence 788999888754322110110 00000112233467888887642 3589999999887543 3443222 12233
Q ss_pred -ECCEEEEEEecC-C-------eEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCcEEEEECCC
Q 018593 251 -CDGCLSVIEISD-E-------WMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNG 321 (353)
Q Consensus 251 -~~g~L~~v~~~~-~-------~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~ 321 (353)
-+|+++++.... . .-.|++++ .++.+- ...+..+. ......+ ++..+++.+++... .++.+|+++
T Consensus 180 ~~dG~l~v~~~~~~~~~~~~~~~~~v~~id-~~t~~v--~~~~~~~~-g~~p~~l-a~~~d~~~lyv~~~-~v~~~d~~t 253 (328)
T 3dsm_A 180 DKYNKMWTITDGGYEGSPYGYEAPSLYRID-AETFTV--EKQFKFKL-GDWPSEV-QLNGTRDTLYWINN-DIWRMPVEA 253 (328)
T ss_dssp CTTSEEEEEBCCBCTTCSSCBCCCEEEEEE-TTTTEE--EEEEECCT-TCCCEEE-EECTTSCEEEEESS-SEEEEETTC
T ss_pred cCCCCEEEEECCCccCCccccCCceEEEEE-CCCCeE--EEEEecCC-CCCceeE-EEecCCCEEEEEcc-EEEEEECCC
Confidence 358988776522 0 12344443 222332 33343321 0112344 66666776776654 899999999
Q ss_pred CeEE
Q 018593 322 RLWK 325 (353)
Q Consensus 322 ~~~~ 325 (353)
++..
T Consensus 254 ~~~~ 257 (328)
T 3dsm_A 254 DRVP 257 (328)
T ss_dssp SSCC
T ss_pred Ccee
Confidence 8864
No 31
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.43 E-value=1.1 Score=38.48 Aligned_cols=201 Identities=9% Similarity=-0.024 Sum_probs=105.9
Q ss_pred CeeEEeeec---CCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCC
Q 018593 95 NGLLCCSSI---PEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDG 170 (353)
Q Consensus 95 ~Gll~~~~~---~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 170 (353)
+|++.+... .....+.++||.|++... ++...... ....... ++.++. + +++... ..
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~---~lg~~~~---~i~~~~---~-~lyv~~---------~~ 62 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGF---KLGDVAQ---SMVIRD---G-IGWIVV---------NN 62 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSS---CCBSCEE---EEEEET---T-EEEEEE---------GG
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCc---ccCccce---EEEEEC---C-EEEEEE---------cC
Confidence 456555531 125689999999998654 21100000 0000011 333332 2 444432 11
Q ss_pred cceEEEEEcCCCcEE-EeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEE-EeeCCCCCCCC-Ccee
Q 018593 171 TFKCLVFDSESNRWR-KFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWR-KISLPDKVGSE-SRSY 247 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~-~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~-~~~~P~~~~~~-~~~~ 247 (353)
...+.++|..+++-. .++. ... |... .+.-+|.+|+.......|.++|+.+.+.. .++.+...... ....
T Consensus 63 ~~~v~viD~~t~~~~~~i~~-~~~-p~~i-----~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~ 135 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITG-FTS-PRYI-----HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQ 135 (328)
T ss_dssp GTEEEEEETTTCCEEEEEEC-CSS-EEEE-----EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCC
T ss_pred CCEEEEEECcccEEEEEcCC-CCC-CcEE-----EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcce
Confidence 457889999887652 2311 111 2111 22257889888733359999999998765 44655411000 1123
Q ss_pred EEEECCEEEEEEe-cCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-----------CcEE
Q 018593 248 LLECDGCLSVIEI-SDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-----------KQVL 315 (353)
Q Consensus 248 l~~~~g~L~~v~~-~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-----------~~~~ 315 (353)
++..+|+|++... ....+.++ +..+.+ .+..++... ....+ .+..+|++++.... +.+.
T Consensus 136 i~~~~~~lyv~~~~~~~~v~vi---D~~t~~--~~~~i~~g~---~p~~i-~~~~dG~l~v~~~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 136 MVQYGKYVYVNCWSYQNRILKI---DTETDK--VVDELTIGI---QPTSL-VMDKYNKMWTITDGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp EEEETTEEEEEECTTCCEEEEE---ETTTTE--EEEEEECSS---CBCCC-EECTTSEEEEEBCCBCTTCSSCBCCCEEE
T ss_pred EEEECCEEEEEcCCCCCEEEEE---ECCCCe--EEEEEEcCC---Cccce-EEcCCCCEEEEECCCccCCccccCCceEE
Confidence 4447889988865 35666665 322233 333444311 11234 56677884444332 3599
Q ss_pred EEECCCCeEEEeeee
Q 018593 316 VYHRNGRLWKEMYSV 330 (353)
Q Consensus 316 ~yd~~~~~~~~v~~~ 330 (353)
.+|+++++......+
T Consensus 207 ~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 207 RIDAETFTVEKQFKF 221 (328)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCeEEEEEec
Confidence 999999988765444
No 32
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.17 E-value=1.2 Score=37.14 Aligned_cols=202 Identities=10% Similarity=0.103 Sum_probs=101.5
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
+.+|.+++.. .....+.++|+..+....++...... ....... ++.++...+ ++++.. .....
T Consensus 38 ~~~g~l~v~~-~~~~~i~~~d~~g~~~~~~~~~~~~~---~~~~~p~---~i~~~~~~g--~l~v~~--------~~~~~ 100 (286)
T 1q7f_A 38 NAQNDIIVAD-TNNHRIQIFDKEGRFKFQFGECGKRD---SQLLYPN---RVAVVRNSG--DIIVTE--------RSPTH 100 (286)
T ss_dssp CTTCCEEEEE-GGGTEEEEECTTSCEEEEECCBSSST---TCBSSEE---EEEEETTTT--EEEEEE--------CGGGC
T ss_pred CCCCCEEEEE-CCCCEEEEECCCCcEEEEecccCCCc---ccccCce---EEEEEcCCC--eEEEEc--------CCCCC
Confidence 3456666653 34567889998755555554322110 0001111 455533222 333331 11134
Q ss_pred eEEEEEcCCCcE-EEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEE
Q 018593 173 KCLVFDSESNRW-RKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLL 249 (353)
Q Consensus 173 ~~~vy~s~~~~W-~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~ 249 (353)
.+.+|+. ++.. +.........|. .+.+ +|.+|+.......|..||...+....+..+.... ....++
T Consensus 101 ~i~~~d~-~g~~~~~~~~~~~~~~~-------~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~--~p~~i~ 170 (286)
T 1q7f_A 101 QIQIYNQ-YGQFVRKFGATILQHPR-------GVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLE--FPNGVV 170 (286)
T ss_dssp EEEEECT-TSCEEEEECTTTCSCEE-------EEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCS--SEEEEE
T ss_pred EEEEECC-CCcEEEEecCccCCCce-------EEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccC--CcEEEE
Confidence 6778884 4433 222110000011 2222 5788777654458999998877666554432221 223344
Q ss_pred EE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-C-cEEEEECCCCeEEE
Q 018593 250 EC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-K-QVLVYHRNGRLWKE 326 (353)
Q Consensus 250 ~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~yd~~~~~~~~ 326 (353)
.. +|+|++.......+.+|.. + .. .+..+...+.......+ ++..+|.+++.... + .+.+||.+.+....
T Consensus 171 ~~~~g~l~v~~~~~~~i~~~~~---~-g~--~~~~~~~~g~~~~p~~i-~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~ 243 (286)
T 1q7f_A 171 VNDKQEIFISDNRAHCVKVFNY---E-GQ--YLRQIGGEGITNYPIGV-GINSNGEILIADNHNNFNLTIFTQDGQLISA 243 (286)
T ss_dssp ECSSSEEEEEEGGGTEEEEEET---T-CC--EEEEESCTTTSCSEEEE-EECTTCCEEEEECSSSCEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEcC---C-CC--EEEEEccCCccCCCcEE-EECCCCCEEEEeCCCCEEEEEECCCCCEEEE
Confidence 43 4888877666667777743 2 22 22233322211223345 66778884444433 3 69999988776665
Q ss_pred ee
Q 018593 327 MY 328 (353)
Q Consensus 327 v~ 328 (353)
+.
T Consensus 244 ~~ 245 (286)
T 1q7f_A 244 LE 245 (286)
T ss_dssp EE
T ss_pred Ec
Confidence 53
No 33
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.12 E-value=1.3 Score=37.24 Aligned_cols=185 Identities=10% Similarity=0.082 Sum_probs=98.2
Q ss_pred CCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCc
Q 018593 104 PEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNR 183 (353)
Q Consensus 104 ~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~ 183 (353)
.....++.+||.++ ...+...... .. ++.+++.. ++++.. .....+.+|+..+++
T Consensus 47 ~~~~~i~~~~~~~~-~~~~~~~~~~---------~~---~l~~~~dg---~l~v~~---------~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 47 VRQNRTWAWSDDGQ-LSPEMHPSHH---------QN---GHCLNKQG---HLIACS---------HGLRRLERQREPGGE 101 (296)
T ss_dssp GGGTEEEEEETTSC-EEEEESSCSS---------EE---EEEECTTC---CEEEEE---------TTTTEEEEECSTTCC
T ss_pred CCCCEEEEEECCCC-eEEEECCCCC---------cc---eeeECCCC---cEEEEe---------cCCCeEEEEcCCCCc
Confidence 34568889999988 5544332211 11 56666643 233321 124578899988888
Q ss_pred EEEeeeccccceeeeeecCceEE--EcceEEeeec-----------------CCCEEEEEECCCceEEEeeCCCCCCCCC
Q 018593 184 WRKFVSVQDYYQFSIMNRNQVVF--VNGALHWLTD-----------------SCSFILALDLEGDVWRKISLPDKVGSES 244 (353)
Q Consensus 184 W~~~~~~~~~~~~~~~~~~~~v~--~~g~ly~~~~-----------------~~~~i~~~D~~~~~~~~~~~P~~~~~~~ 244 (353)
.+........ ........+. -+|.+|+... ....|..+|+. ++...+.-... .
T Consensus 102 ~~~~~~~~~~---~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~----~ 173 (296)
T 3e5z_A 102 WESIADSFEG---KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV----K 173 (296)
T ss_dssp EEEEECEETT---EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS----S
T ss_pred EEEEeeccCC---CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC----C
Confidence 7655211111 1111111222 3578777421 11379999988 55554422111 1
Q ss_pred ceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCe-EEEEeeccccccCccceeeeeecCCcEEEEEeCCcEEEEECCCC
Q 018593 245 RSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEW-HSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGR 322 (353)
Q Consensus 245 ~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~ 322 (353)
...++.. +|++.++......+.+|.++.. ... .....+ . ........+ .++.+|. +++...+.+..||++++
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~--g~~~~~~~~~-~-~~~~~p~~i-~~d~~G~-l~v~~~~~v~~~~~~g~ 247 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNAR--GETEYQGVHF-T-VEPGKTDGL-RVDAGGL-IWASAGDGVHVLTPDGD 247 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSS--SCEEEEEEEE-C-CSSSCCCSE-EEBTTSC-EEEEETTEEEEECTTSC
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCC--CcCcCCCeEe-e-CCCCCCCeE-EECCCCC-EEEEcCCeEEEECCCCC
Confidence 2233433 4776633335677778877532 344 222223 1 111223345 6777888 56666777999999977
Q ss_pred eEEEe
Q 018593 323 LWKEM 327 (353)
Q Consensus 323 ~~~~v 327 (353)
....+
T Consensus 248 ~~~~~ 252 (296)
T 3e5z_A 248 ELGRV 252 (296)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66655
No 34
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.90 E-value=1.3 Score=36.38 Aligned_cols=113 Identities=10% Similarity=0.064 Sum_probs=72.4
Q ss_pred EEEcceEEeeecCC--CEEEEEECCCceE-EEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEE
Q 018593 205 VFVNGALHWLTDSC--SFILALDLEGDVW-RKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSV 281 (353)
Q Consensus 205 v~~~g~ly~~~~~~--~~i~~~D~~~~~~-~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~ 281 (353)
.+.+|.+|.-++.. ..|..+|+.+++- ..+++|... ..--+...+++|+++...+..+-++ |. ..-.++
T Consensus 27 ~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~---fgeGi~~~~~~ly~ltw~~~~v~v~---D~--~tl~~~ 98 (243)
T 3mbr_X 27 FYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY---FGAGIVAWRDRLIQLTWRNHEGFVY---DL--ATLTPR 98 (243)
T ss_dssp EEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESSSSEEEEE---ET--TTTEEE
T ss_pred EEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc---ceeEEEEeCCEEEEEEeeCCEEEEE---EC--CcCcEE
Confidence 34457777766653 5899999999875 444787665 3445667789999987666655555 32 334577
Q ss_pred EeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEeeeec
Q 018593 282 DKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 282 ~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v~~~~ 331 (353)
.+++.+.. +. ++..++..+++... +.+..+|++|.+...--.+.
T Consensus 99 ~ti~~~~~-----Gw-glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 99 ARFRYPGE-----GW-ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp EEEECSSC-----CC-EEEECSSCEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred EEEeCCCC-----ce-EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEc
Confidence 77776431 22 44445554665543 44999999997665544443
No 35
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.67 E-value=1.6 Score=36.28 Aligned_cols=184 Identities=7% Similarity=-0.017 Sum_probs=94.5
Q ss_pred cCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcce
Q 018593 94 CNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFK 173 (353)
Q Consensus 94 ~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (353)
.+|.+.+.. .....++.+||. ++...++.+... .... ++.+|+... ++... .....
T Consensus 113 ~~g~l~v~~-~~~~~i~~~~~~-g~~~~~~~~~~~-------~~~~---~i~~d~~g~---l~v~~---------~~~~~ 168 (300)
T 2qc5_A 113 LNGDIWFTQ-LNGDRIGKLTAD-GTIYEYDLPNKG-------SYPA---FITLGSDNA---LWFTE---------NQNNS 168 (300)
T ss_dssp STTCEEEEE-TTTTEEEEECTT-SCEEEEECSSTT-------CCEE---EEEECTTSS---EEEEE---------TTTTE
T ss_pred CCCCEEEEc-cCCCeEEEECCC-CCEEEccCCCCC-------CCce---eEEECCCCC---EEEEe---------cCCCe
Confidence 456666653 335678888887 665543321111 1111 566665432 33321 12346
Q ss_pred EEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE
Q 018593 174 CLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC 251 (353)
Q Consensus 174 ~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~ 251 (353)
+.+|+. ++........... .....+.+ +|.+|+.......|..||+ ++++....+|.... ....+...
T Consensus 169 i~~~~~-~g~~~~~~~~~~~------~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~--~~~~i~~d 238 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPLPTNA------AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNA--RPHAITAG 238 (300)
T ss_dssp EEEECT-TCCEEEEECSSTT------CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC--CEEEEEEC
T ss_pred EEEECC-CCcEEEeeCCCCC------CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCC--CceEEEEC
Confidence 777887 6666554211111 00112333 5788877655458999999 66676666663321 22334443
Q ss_pred -CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCcEEEEECC
Q 018593 252 -DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRN 320 (353)
Q Consensus 252 -~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~ 320 (353)
+|+|++.......+..+ +. + ..... ..++.. ......+ .+..+|. +++...+.+..||++
T Consensus 239 ~~g~l~v~~~~~~~i~~~--~~-~-g~~~~-~~~~~~--~~~~~~i-~~~~~g~-l~v~~~~~i~~~~p~ 299 (300)
T 2qc5_A 239 KNSEIWFTEWGANQIGRI--TN-D-NTIQE-YQLQTE--NAEPHGI-TFGKDGS-VWFALKCKIGKLNLN 299 (300)
T ss_dssp STTCEEEEETTTTEEEEE--CT-T-SCEEE-EECCST--TCCCCCE-EECTTSC-EEEECSSEEEEEEEC
T ss_pred CCCCEEEeccCCCeEEEE--CC-C-CcEEE-EECCcc--CCcccee-EeCCCCC-EEEEccCceEEeCCC
Confidence 58888876544555554 22 2 33322 222211 1112344 5566788 555554478899875
No 36
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.25 E-value=2 Score=35.65 Aligned_cols=191 Identities=9% Similarity=0.124 Sum_probs=94.5
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
..+|.+++........+.++|+..+....+...... ... ++.+++.. ++++.. ....
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~--------~~~---~i~~~~~g---~l~v~~---------~~~~ 142 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQ--------HPR---GVTVDNKG---RIIVVE---------CKVM 142 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCS--------CEE---EEEECTTS---CEEEEE---------TTTT
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCC--------Cce---EEEEeCCC---CEEEEE---------CCCC
Confidence 356777776411256889999644433334322111 111 56666643 244331 1245
Q ss_pred eEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEE
Q 018593 173 KCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLE 250 (353)
Q Consensus 173 ~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~ 250 (353)
.+.+|+.....-......... ....++.+ +|.+|+.......|..||...+....+..+.... ....+..
T Consensus 143 ~i~~~~~~g~~~~~~~~~~~~------~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~--~p~~i~~ 214 (286)
T 1q7f_A 143 RVIIFDQNGNVLHKFGCSKHL------EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITN--YPIGVGI 214 (286)
T ss_dssp EEEEECTTSCEEEEEECTTTC------SSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSC--SEEEEEE
T ss_pred EEEEEcCCCCEEEEeCCCCcc------CCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccC--CCcEEEE
Confidence 777888654333332110111 00112333 4788776554458999999777665554332111 2233444
Q ss_pred E-CCEEEEEEecCC-eEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCcEEEEECCC
Q 018593 251 C-DGCLSVIEISDE-WMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNG 321 (353)
Q Consensus 251 ~-~g~L~~v~~~~~-~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~ 321 (353)
. +|+|+++..... .+.+|. .+ ..- +..+...........+ .+..+|.+++....+.+.+|+...
T Consensus 215 d~~G~l~v~~~~~~~~i~~~~---~~-g~~--~~~~~~~~~~~~~~~i-~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 215 NSNGEILIADNHNNFNLTIFT---QD-GQL--ISALESKVKHAQCFDV-ALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp CTTCCEEEEECSSSCEEEEEC---TT-SCE--EEEEEESSCCSCEEEE-EEETTTEEEEEETTTEEEEEECSC
T ss_pred CCCCCEEEEeCCCCEEEEEEC---CC-CCE--EEEEcccCCCCcceeE-EECCCCcEEEECCCCeEEEEEccc
Confidence 3 588888876554 788873 22 222 2222221111112234 566788744443344587887644
No 37
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.07 E-value=2.5 Score=36.00 Aligned_cols=202 Identities=14% Similarity=0.088 Sum_probs=100.2
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
+.+|-+++.. .....++++|+.+++...+...... ... ++.+++.. ++++.. ... .....
T Consensus 53 ~~~g~l~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~--------~~~---~i~~~~dg---~l~v~~----~~~-~~~~~ 112 (333)
T 2dg1_A 53 DRQGQLFLLD-VFEGNIFKINPETKEIKRPFVSHKA--------NPA---AIKIHKDG---RLFVCY----LGD-FKSTG 112 (333)
T ss_dssp CTTSCEEEEE-TTTCEEEEECTTTCCEEEEEECSSS--------SEE---EEEECTTS---CEEEEE----CTT-SSSCC
T ss_pred CCCCCEEEEE-CCCCEEEEEeCCCCcEEEEeeCCCC--------Ccc---eEEECCCC---cEEEEe----CCC-CCCCc
Confidence 3466666543 3456899999999887765321111 111 56666543 233321 110 01124
Q ss_pred eEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecC------CCEEEEEECCCceEEEeeCCCCCCCCC
Q 018593 173 KCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDS------CSFILALDLEGDVWRKISLPDKVGSES 244 (353)
Q Consensus 173 ~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~------~~~i~~~D~~~~~~~~~~~P~~~~~~~ 244 (353)
.+.+|+..++.-+... ... ... .....+.+ +|.+|+.... ...|..+|+.+++...+.-.. . .
T Consensus 113 ~i~~~d~~~~~~~~~~--~~~-~~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~---~ 183 (333)
T 2dg1_A 113 GIFAATENGDNLQDII--EDL-STA--YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI-S---V 183 (333)
T ss_dssp EEEEECTTSCSCEEEE--CSS-SSC--CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE-S---S
T ss_pred eEEEEeCCCCEEEEEE--ccC-ccC--CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC-C---c
Confidence 6778888777654221 101 000 00112222 5777766542 137889998877665542110 0 1
Q ss_pred ceeEEEE-CCE-EEEEEecCCeEEEEEEecCCCCCeEEEE-eec--cccccCccceeeeeecCCcEEEEEe--CCcEEEE
Q 018593 245 RSYLLEC-DGC-LSVIEISDEWMETWVLKDYYRDEWHSVD-KVS--LRCIKGMVPSIFPISQTREYVFLAT--HKQVLVY 317 (353)
Q Consensus 245 ~~~l~~~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~~~-~i~--~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~y 317 (353)
...+... +|+ |++.......+.+|.++..+ ....... .+. .... .....+ .++.+|. +++.+ .+.+.+|
T Consensus 184 ~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g-~~~~~~~~~~~~~~~~~-~~~~~i-~~d~~G~-l~v~~~~~~~v~~~ 259 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETTANRLHRIALEDDG-VTIQPFGATIPYYFTGH-EGPDSC-CIDSDDN-LYVAMYGQGRVLVF 259 (333)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-SSEEEEEEEEEEECCSS-SEEEEE-EEBTTCC-EEEEEETTTEEEEE
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEEecCCC-cCcccccceEEEecCCC-CCCCce-EECCCCC-EEEEEcCCCEEEEE
Confidence 1233333 454 66655455677777664322 2222111 111 1111 122345 6677888 55554 3569999
Q ss_pred ECCCCeEEEe
Q 018593 318 HRNGRLWKEM 327 (353)
Q Consensus 318 d~~~~~~~~v 327 (353)
|++++....+
T Consensus 260 d~~g~~~~~~ 269 (333)
T 2dg1_A 260 NKRGYPIGQI 269 (333)
T ss_dssp CTTSCEEEEE
T ss_pred CCCCCEEEEE
Confidence 9977666555
No 38
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.07 E-value=3.9 Score=39.73 Aligned_cols=142 Identities=13% Similarity=0.153 Sum_probs=74.0
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--c--ceEEeeecCCCEEEEEECCCceEE-EeeCCCCCCCCCc
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--N--GALHWLTDSCSFILALDLEGDVWR-KISLPDKVGSESR 245 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~--g~ly~~~~~~~~i~~~D~~~~~~~-~~~~P~~~~~~~~ 245 (353)
...+.+|+..++.|......... .. .-..+.+ + |.+...+..+..|..+|+.+..-. ...+..... .-
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h-~~----~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~--~v 148 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVH-SA----SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI--GV 148 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCC-SS----CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS--CE
T ss_pred CCeEEEEECCCCcccccccccCC-CC----CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC--ce
Confidence 44688999988887666322111 00 0012222 2 444444444458888998776211 111111110 11
Q ss_pred eeEEEE--------------CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecC---CcEEEE
Q 018593 246 SYLLEC--------------DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQT---REYVFL 308 (353)
Q Consensus 246 ~~l~~~--------------~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~---~~~v~~ 308 (353)
..+... +|.+.+++..+..+.+|.+.... ..+.....+.. ....+..+ .+..+ +..++.
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~-~~~~~~~~~~~--h~~~V~~l-~~sp~~~~~~~l~s 224 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA-QTYVLESTLEG--HSDWVRDV-AWSPTVLLRSYLAS 224 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTT-TEEEEEEEECC--CSSCEEEE-EECCCCSSSEEEEE
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCc-ccceeeeeecC--CCCcEEEE-EeccCCCCCCEEEE
Confidence 112221 36666666677889999885532 45555554442 22223334 44555 675555
Q ss_pred EeC-CcEEEEECCCCe
Q 018593 309 ATH-KQVLVYHRNGRL 323 (353)
Q Consensus 309 ~~~-~~~~~yd~~~~~ 323 (353)
.+. +.+.+||+++++
T Consensus 225 ~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 225 VSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EESSSCEEEEEESSSS
T ss_pred EecCCEEEEecCCCCC
Confidence 554 459999998863
No 39
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.04 E-value=1.5 Score=36.48 Aligned_cols=111 Identities=12% Similarity=0.112 Sum_probs=69.6
Q ss_pred EEcceEEeeecCC--CEEEEEECCCceE-EEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEE
Q 018593 206 FVNGALHWLTDSC--SFILALDLEGDVW-RKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVD 282 (353)
Q Consensus 206 ~~~g~ly~~~~~~--~~i~~~D~~~~~~-~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~ 282 (353)
+.+|.+|.-++.. ..|..+|+.+++- ..+++|... ..--+...+++|+++...+..+-++ |.+ .-.++.
T Consensus 50 ~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~---FgeGit~~g~~ly~ltw~~~~v~v~---D~~--t~~~~~ 121 (262)
T 3nol_A 50 YRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY---FGEGISDWKDKIVGLTWKNGLGFVW---NIR--NLRQVR 121 (262)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESSSSEEEEE---ETT--TCCEEE
T ss_pred EECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcc---ceeEEEEeCCEEEEEEeeCCEEEEE---ECc--cCcEEE
Confidence 3467788776653 3799999999875 444776544 3344666789999987766665555 322 234666
Q ss_pred eeccccccCccceeeeeecCCcEEEEEe-CCcEEEEECCCCeEEEeeee
Q 018593 283 KVSLRCIKGMVPSIFPISQTREYVFLAT-HKQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 283 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd~~~~~~~~v~~~ 330 (353)
+++.+. ... ++..+++.+++.. .+.+..+|++|.+...--.+
T Consensus 122 ti~~~~-----eG~-glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 122 SFNYDG-----EGW-GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEECSS-----CCC-CEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEECCC-----Cce-EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 777633 122 4444555465554 34499999999765544344
No 40
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.73 E-value=2.8 Score=35.48 Aligned_cols=189 Identities=8% Similarity=-0.007 Sum_probs=97.8
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
.+.+++.. .....+.++|+.|++....-..+.. .. ++.+++..+ .+++.. .....+
T Consensus 9 ~~~~~v~~-~~~~~v~~~d~~~~~~~~~~~~~~~---------~~---~~~~s~dg~--~l~~~~---------~~~~~i 64 (331)
T 3u4y_A 9 SNFGIVVE-QHLRRISFFSTDTLEILNQITLGYD---------FV---DTAITSDCS--NVVVTS---------DFCQTL 64 (331)
T ss_dssp CCEEEEEE-GGGTEEEEEETTTCCEEEEEECCCC---------EE---EEEECSSSC--EEEEEE---------STTCEE
T ss_pred CCEEEEEe-cCCCeEEEEeCcccceeeeEEccCC---------cc---eEEEcCCCC--EEEEEe---------CCCCeE
Confidence 44555543 4556899999999987654332211 11 344544322 344432 123478
Q ss_pred EEEEcCCCcE-EEeeeccccceee-eeecCceEEEcce-EEeeecCC-C--EEEEEECCCceEEEe-eCCCCCCCCCcee
Q 018593 175 LVFDSESNRW-RKFVSVQDYYQFS-IMNRNQVVFVNGA-LHWLTDSC-S--FILALDLEGDVWRKI-SLPDKVGSESRSY 247 (353)
Q Consensus 175 ~vy~s~~~~W-~~~~~~~~~~~~~-~~~~~~~v~~~g~-ly~~~~~~-~--~i~~~D~~~~~~~~~-~~P~~~~~~~~~~ 247 (353)
.+++..++.- ......... +.. . .+.-+|. +| ..... . .|..+|+.+.+.... +.+.. ...
T Consensus 65 ~~~d~~~~~~~~~~~~~~~~-~~~~~-----~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-----~~~ 132 (331)
T 3u4y_A 65 VQIETQLEPPKVVAIQEGQS-SMADV-----DITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYD-----AVG 132 (331)
T ss_dssp EEEECSSSSCEEEEEEECSS-CCCCE-----EECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTT-----EEE
T ss_pred EEEECCCCceeEEecccCCC-Cccce-----EECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCC-----ccc
Confidence 8999888764 211110111 111 1 1112344 55 44333 2 899999998765433 33221 233
Q ss_pred EEEE-CCE-EEEEEecCCe-EEEEEEecCCCCCeEE-EEeeccccccCccceeeeeecCCcEEEEEeC--CcEEEEECCC
Q 018593 248 LLEC-DGC-LSVIEISDEW-METWVLKDYYRDEWHS-VDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRNG 321 (353)
Q Consensus 248 l~~~-~g~-L~~v~~~~~~-~~vw~l~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~ 321 (353)
+... +|+ |++....... +.+|.++..+. .... ...++. ......+ .+..+|+.+++... +.+.+||+++
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~-~~~~~~~~~~~---~~~~~~~-~~spdg~~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADGV-LFDTGQEFISG---GTRPFNI-TFTPDGNFAFVANLIGNSIGILETQN 207 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTCC-EEEEEEEEECS---SSSEEEE-EECTTSSEEEEEETTTTEEEEEECSS
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCCc-EeecCCccccC---CCCccce-EECCCCCEEEEEeCCCCeEEEEECCC
Confidence 4443 465 6666555556 99999865331 1111 112221 1112334 66778875666553 4499999998
Q ss_pred CeE
Q 018593 322 RLW 324 (353)
Q Consensus 322 ~~~ 324 (353)
++.
T Consensus 208 ~~~ 210 (331)
T 3u4y_A 208 PEN 210 (331)
T ss_dssp TTS
T ss_pred Ccc
Confidence 875
No 41
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.73 E-value=2.8 Score=35.47 Aligned_cols=117 Identities=10% Similarity=0.064 Sum_probs=65.0
Q ss_pred cce-EEeeecCCCEEEEEECCCceE----EEeeCCCCCCCCCceeEEEE-CCE-EEEEEecCCeEEEEEEecCCCCCeEE
Q 018593 208 NGA-LHWLTDSCSFILALDLEGDVW----RKISLPDKVGSESRSYLLEC-DGC-LSVIEISDEWMETWVLKDYYRDEWHS 280 (353)
Q Consensus 208 ~g~-ly~~~~~~~~i~~~D~~~~~~----~~~~~P~~~~~~~~~~l~~~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~ 280 (353)
+|. +|........+..||+.+.+. ..++.+.. ...+... +|+ |++.......+.+|.+ .+.+...
T Consensus 186 dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~v~~~~~~~i~~~d~---~~~~~~~ 257 (331)
T 3u4y_A 186 DGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNL-----PGTIVVSRDGSTVYVLTESTVDVFNFNQ---LSGTLSF 257 (331)
T ss_dssp TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSC-----CCCEEECTTSSEEEEECSSEEEEEEEET---TTTEEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCC-----CceEEECCCCCEEEEEEcCCCEEEEEEC---CCCceee
Confidence 565 666665446899999987663 33333211 2233333 466 4444334455666633 3244444
Q ss_pred EEeeccc-----cccCccceeeeeecCCcEEEEEeCC--cEEEEECCCCeEEEeeeeccC
Q 018593 281 VDKVSLR-----CIKGMVPSIFPISQTREYVFLATHK--QVLVYHRNGRLWKEMYSVKYG 333 (353)
Q Consensus 281 ~~~i~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~yd~~~~~~~~v~~~~~~ 333 (353)
+..++.. ........+ .+..+|..+++.... .+.+||+.++....+..++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~-~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~ 316 (331)
T 3u4y_A 258 VKSFGHGLLIDPRPLFGANQM-ALNKTETKLFISANISRELKVFTISGKVVGYVAGIEAN 316 (331)
T ss_dssp EEEEECCCCCCCGGGTTCCCE-EECTTSSEEEEEETTTTEEEEEETTSCEEEECTTCCCB
T ss_pred ecccccccccCCCCcccccce-EECCCCCEEEEecCCCCcEEEEEecCCcccceeccccc
Confidence 4444421 111111234 667788867766543 499999999998888666543
No 42
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.57 E-value=3.2 Score=35.55 Aligned_cols=215 Identities=10% Similarity=0.016 Sum_probs=108.9
Q ss_pred eecCeeEEeeec-CCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCC
Q 018593 92 ASCNGLLCCSSI-PEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDG 170 (353)
Q Consensus 92 ~s~~Gll~~~~~-~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 170 (353)
-+-+|-++.... .....+.+|+..+++...+...... ..... ++.+++.. . .++... ..
T Consensus 47 ~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~------~~~p~---~~a~spdg-~-~l~~~~---------~~ 106 (347)
T 3hfq_A 47 LSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAP------GTPPA---YVAVDEAR-Q-LVYSAN---------YH 106 (347)
T ss_dssp ECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEE------SCCCS---EEEEETTT-T-EEEEEE---------TT
T ss_pred EccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecC------CCCCE---EEEECCCC-C-EEEEEe---------CC
Confidence 344666444431 2356899999987776554331110 01111 34555533 2 233321 12
Q ss_pred cceEEEEEcC-CCcEEEeeeccccceeee--ee---cCceEEE--cceEEeeecCCCEEEEEECC-CceEEEe---eCCC
Q 018593 171 TFKCLVFDSE-SNRWRKFVSVQDYYQFSI--MN---RNQVVFV--NGALHWLTDSCSFILALDLE-GDVWRKI---SLPD 238 (353)
Q Consensus 171 ~~~~~vy~s~-~~~W~~~~~~~~~~~~~~--~~---~~~~v~~--~g~ly~~~~~~~~i~~~D~~-~~~~~~~---~~P~ 238 (353)
...+.+|+.. ++..+........ .... +. ....+.+ +|.+|........+..||+. +++...+ ..+.
T Consensus 107 ~~~v~v~~~~~~g~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~ 185 (347)
T 3hfq_A 107 KGTAEVMKIAADGALTLTDTVQHS-GHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA 185 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECC-CCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT
T ss_pred CCEEEEEEeCCCCCeeecceeecC-CCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC
Confidence 3467788874 4555444221110 0000 00 0012233 67766665544689999988 5555443 3333
Q ss_pred CCCCCCceeEEEE-CCE-EEEEEecCCeEEEEEEecCCCCCeEEEEeecc-c-ccc--CccceeeeeecCCcEEEEEe--
Q 018593 239 KVGSESRSYLLEC-DGC-LSVIEISDEWMETWVLKDYYRDEWHSVDKVSL-R-CIK--GMVPSIFPISQTREYVFLAT-- 310 (353)
Q Consensus 239 ~~~~~~~~~l~~~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~-~-~~~--~~~~~~~~~~~~~~~v~~~~-- 310 (353)
.. ....+... +|+ |+++......+.+|.++.. ..++..+..+.. + ... .....+ .+..+|+.+++..
T Consensus 186 g~---~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i-~~spdG~~l~v~~~~ 260 (347)
T 3hfq_A 186 GF---GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGAAAI-RLSHDGHFLYVSNRG 260 (347)
T ss_dssp TC---CEEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEEEEE-EECTTSCEEEEEEET
T ss_pred CC---CCceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCCcceeE-EECCCCCEEEEEeCC
Confidence 22 12234443 476 5554446788999988642 245555555543 1 111 123345 6778888666654
Q ss_pred CCcEEEEECCC-CeEEEeeeecc
Q 018593 311 HKQVLVYHRNG-RLWKEMYSVKY 332 (353)
Q Consensus 311 ~~~~~~yd~~~-~~~~~v~~~~~ 332 (353)
.+.+.+||++. ++++.+..+..
T Consensus 261 ~~~v~v~~~~~~g~~~~~~~~~~ 283 (347)
T 3hfq_A 261 YNTLAVFAVTADGHLTLIQQIST 283 (347)
T ss_dssp TTEEEEEEECGGGCEEEEEEEEC
T ss_pred CCEEEEEEECCCCcEEEeEEEec
Confidence 34599999873 46666655543
No 43
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.52 E-value=5.9 Score=38.56 Aligned_cols=147 Identities=10% Similarity=0.123 Sum_probs=80.3
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEE
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLL 249 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~ 249 (353)
..+..|+.+++.|+........ .. ....-..+.. +|.+ |++.....+..||+.++++..+..+.......-..+.
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 545 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNS-QL-LENFVRSIAQDSEGRF-WIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIY 545 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTS-SC-SCSCEEEEEECTTCCE-EEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEE
T ss_pred CceEEEeCCCCeEEecccCccc-cc-ccceeEEEEEcCCCCE-EEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEE
Confidence 4677889888888766321110 00 0000112222 3555 5555423799999999999887544332211223444
Q ss_pred E-ECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecccccc-CccceeeeeecCCcEEEEEeCCcEEEEECCCCeEEEe
Q 018593 250 E-CDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIK-GMVPSIFPISQTREYVFLATHKQVLVYHRNGRLWKEM 327 (353)
Q Consensus 250 ~-~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~~~v 327 (353)
+ .+|.|.+.+. ..+ +..+ +..+.++..... . .+.. ..+..+ ..+.+|. +.+.+.+.+..||+++++++..
T Consensus 546 ~d~~g~lWi~T~--~Gl-v~~~-d~~~~~~~~~~~-~-~gl~~~~i~~i-~~d~~g~-lW~~t~~Gl~~~~~~~~~~~~~ 617 (781)
T 3v9f_A 546 RSSKGQMWLATG--EGL-VCFP-SARNFDYQVFQR-K-EGLPNTHIRAI-SEDKNGN-IWASTNTGISCYITSKKCFYTY 617 (781)
T ss_dssp ECTTSCEEEEET--TEE-EEES-CTTTCCCEEECG-G-GTCSCCCCCEE-EECSSSC-EEEECSSCEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEC--CCc-eEEE-CCCCCcEEEccc-c-CCCCCceEEEE-EECCCCC-EEEEcCCceEEEECCCCceEEe
Confidence 4 3588887654 222 1333 222244433211 1 1221 122234 4556777 7888888899999999999876
Q ss_pred ee
Q 018593 328 YS 329 (353)
Q Consensus 328 ~~ 329 (353)
..
T Consensus 618 ~~ 619 (781)
T 3v9f_A 618 DH 619 (781)
T ss_dssp CG
T ss_pred cc
Confidence 43
No 44
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.48 E-value=3.5 Score=35.85 Aligned_cols=193 Identities=13% Similarity=0.125 Sum_probs=95.2
Q ss_pred eeecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCC
Q 018593 91 RASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDG 170 (353)
Q Consensus 91 ~~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 170 (353)
....+|.+++.. ....++.+|+.|++...--+.... . ..... .. ++ +|++.. .
T Consensus 99 ~~~~~~~v~v~~--~~g~l~a~d~~tG~~~W~~~~~~~----~--~~~p~---~~-----~~-~v~v~~----------~ 151 (376)
T 3q7m_A 99 VTVSGGHVYIGS--EKAQVYALNTSDGTVAWQTKVAGE----A--LSRPV---VS-----DG-LVLIHT----------S 151 (376)
T ss_dssp EEEETTEEEEEE--TTSEEEEEETTTCCEEEEEECSSC----C--CSCCE---EE-----TT-EEEEEC----------T
T ss_pred ceEeCCEEEEEc--CCCEEEEEECCCCCEEEEEeCCCc----e--EcCCE---EE-----CC-EEEEEc----------C
Confidence 344577777763 557899999999985431111111 0 00111 11 12 344321 1
Q ss_pred cceEEEEEcCCCc--EEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCce--EEEe-eCCCCCCC---
Q 018593 171 TFKCLVFDSESNR--WRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDV--WRKI-SLPDKVGS--- 242 (353)
Q Consensus 171 ~~~~~vy~s~~~~--W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~--~~~~-~~P~~~~~--- 242 (353)
...+..||.++++ |+.. ..............+..+|.+|.-...+ .+.++|..+++ |+.- ..|.....
T Consensus 152 ~g~l~~~d~~tG~~~W~~~---~~~~~~~~~~~~~~~~~~~~v~~g~~~g-~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 227 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVN---LDMPSLSLRGESAPTTAFGAAVVGGDNG-RVSAVLMEQGQMIWQQRISQATGSTEIDR 227 (376)
T ss_dssp TSEEEEEETTTCCEEEEEE---CCC-----CCCCCCEEETTEEEECCTTT-EEEEEETTTCCEEEEEECCC---------
T ss_pred CCeEEEEECCCCcEEEEEe---CCCCceeecCCCCcEEECCEEEEEcCCC-EEEEEECCCCcEEEEEecccCCCCccccc
Confidence 3467788887764 8876 2220111222344667788887765554 89999998764 5443 22221100
Q ss_pred --CCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe-CCcEEEEEC
Q 018593 243 --ESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT-HKQVLVYHR 319 (353)
Q Consensus 243 --~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd~ 319 (353)
......+..+|.+++... ...+..+.. +.+...|... .... .. ....++. +++.+ .+.++.+|+
T Consensus 228 ~~~~~~~p~~~~~~v~~~~~-~g~l~~~d~-~tG~~~w~~~----~~~~----~~--~~~~~~~-l~~~~~~g~l~~~d~ 294 (376)
T 3q7m_A 228 LSDVDTTPVVVNGVVFALAY-NGNLTALDL-RSGQIMWKRE----LGSV----ND--FIVDGNR-IYLVDQNDRVMALTI 294 (376)
T ss_dssp --CCCCCCEEETTEEEEECT-TSCEEEEET-TTCCEEEEEC----CCCE----EE--EEEETTE-EEEEETTCCEEEEET
T ss_pred ccccCCCcEEECCEEEEEec-CcEEEEEEC-CCCcEEeecc----CCCC----CC--ceEECCE-EEEEcCCCeEEEEEC
Confidence 011222345677776543 223333322 1222456542 1110 01 1122455 56555 457999999
Q ss_pred CCCeEEEe
Q 018593 320 NGRLWKEM 327 (353)
Q Consensus 320 ~~~~~~~v 327 (353)
++++..+-
T Consensus 295 ~tG~~~w~ 302 (376)
T 3q7m_A 295 DGGVTLWT 302 (376)
T ss_dssp TTCCEEEE
T ss_pred CCCcEEEe
Confidence 99875543
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.69 E-value=4.6 Score=35.02 Aligned_cols=187 Identities=12% Similarity=0.060 Sum_probs=93.3
Q ss_pred CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcE
Q 018593 105 EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRW 184 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W 184 (353)
....+.|||..+++....-..... ..... .+.+.+.. .-.++..+ ....+.+++..++..
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~~~~h------~~~v~---~~~~~~~~-~~~l~s~~----------~d~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 94 KGGDIILWDYDVQNKTSFIQGMGP------GDAIT---GMKFNQFN-TNQLFVSS----------IRGATTLRDFSGSVI 153 (383)
T ss_dssp BTSCEEEEETTSTTCEEEECCCST------TCBEE---EEEEETTE-EEEEEEEE----------TTTEEEEEETTSCEE
T ss_pred CCCeEEEEeCCCcccceeeecCCc------CCcee---EEEeCCCC-CCEEEEEe----------CCCEEEEEECCCCce
Confidence 456788899988776654332111 11222 45554421 12233221 145788899887665
Q ss_pred EEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCE-EEEEEecC
Q 018593 185 RKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGC-LSVIEISD 262 (353)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~-L~~v~~~~ 262 (353)
+........ ..... .-...-+|.....+..+..|..+|+..+....+..... .-..+... +|+ +.+.+..+
T Consensus 154 ~~~~~~~~~-~~~v~--~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 154 QVFAKTDSW-DYWYC--CVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKA----KVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp EEEECCCCS-SCCEE--EEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSS----CEEEEEECSSCTTEEEEEETT
T ss_pred EEEeccCCC-CCCeE--EEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCC----cEEEEEECCCCCCEEEEEeCC
Confidence 554221100 00000 00111234444444444589999996655544432211 12233333 355 66666678
Q ss_pred CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeec-CCcEEEEEeC-CcEEEEECCCCe
Q 018593 263 EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQ-TREYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 263 ~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
..+.+|.+..... .-..+..+.. ...+..+ .+.. ++..++.... +.+.+||+++.+
T Consensus 227 ~~i~iwd~~~~~~-~~~~~~~~~~---~~~v~~~-~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 227 ATVKLWDLRNIKD-KNSYIAEMPH---EKPVNAA-YFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp SEEEEEEGGGCCS-TTCEEEEEEC---SSCEEEE-EECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred CEEEEEeCCCCCc-ccceEEEecC---CCceEEE-EEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 8999998865332 1122222322 2223334 5556 7776665554 459999998764
No 46
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.62 E-value=3.9 Score=34.07 Aligned_cols=110 Identities=9% Similarity=-0.033 Sum_probs=67.6
Q ss_pred ceEEeeecC--CCEEEEEECCCceEE-EeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 209 GALHWLTDS--CSFILALDLEGDVWR-KISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 209 g~ly~~~~~--~~~i~~~D~~~~~~~-~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
|.+|..++. ...|.++|+.+++-. .+++|... ....+...+++|++....+..+.++ |. ..-..+.+++
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~---fgeGi~~~g~~lyv~t~~~~~v~vi---D~--~t~~v~~~i~ 103 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY---FGEGLTLLNEKLYQVVWLKNIGFIY---DR--RTLSNIKNFT 103 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC---CEEEEEEETTEEEEEETTCSEEEEE---ET--TTTEEEEEEE
T ss_pred CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc---ceEEEEEeCCEEEEEEecCCEEEEE---EC--CCCcEEEEEE
Confidence 678887653 258999999987754 44666543 2334556678999887655555554 32 2345666776
Q ss_pred cccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEeeeec
Q 018593 286 LRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v~~~~ 331 (353)
.. . .... ++..+|+.+++... +.+...|++|.+...--.+.
T Consensus 104 ~g-~---~~g~-glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 104 HQ-M---KDGW-GLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp CC-S---SSCC-EEEECSSSEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred CC-C---CCeE-EEEECCCEEEEECCCCeEEEEECCCCcEEEEEEEC
Confidence 54 1 1223 45545554665543 44999999997765544443
No 47
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.38 E-value=5.6 Score=35.22 Aligned_cols=204 Identities=10% Similarity=0.063 Sum_probs=100.2
Q ss_pred Eee-ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCC
Q 018593 90 VRA-SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRP 168 (353)
Q Consensus 90 ~~~-s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~ 168 (353)
+++ |.+++|-+. ..+.++|||..|++...+-..... ..... .+.+.+.+ .+ ++.+
T Consensus 110 ~l~wS~~n~lAvg---ld~tV~lWd~~tg~~~~~~~~~~~------~~~V~---sv~fspdg-~~--lasg--------- 165 (420)
T 4gga_A 110 LVDWSSGNVLAVA---LDNSVYLWSASSGDILQLLQMEQP------GEYIS---SVAWIKEG-NY--LAVG--------- 165 (420)
T ss_dssp CEEECTTSEEEEE---ETTEEEEEETTTCCEEEEEECCST------TCCEE---EEEECTTS-SE--EEEE---------
T ss_pred eEEECCCCEEEEE---eCCEEEEEECCCCCEEEEEEecCC------CCcEE---EEEECCCC-CE--EEEE---------
Confidence 444 445655544 357899999999987765433221 11122 45555532 32 3332
Q ss_pred CCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeE
Q 018593 169 DGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYL 248 (353)
Q Consensus 169 ~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l 248 (353)
.....+.+|+..++.-... ... .......+..++.+...+.....+..+|..........+..... ....+
T Consensus 166 s~Dg~v~iWd~~~~~~~~~--~~~-----h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~--~~~~~ 236 (420)
T 4gga_A 166 TSSAEVQLWDVQQQKRLRN--MTS-----HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--EVCGL 236 (420)
T ss_dssp ETTSCEEEEETTTTEEEEE--ECC-----CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--CEEEE
T ss_pred ECCCeEEEEEcCCCcEEEE--EeC-----CCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccccc--ceeee
Confidence 1145788999887642211 010 00011134455655555555467888887765443333322221 11222
Q ss_pred EE-ECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC---CcEEEEECCCCeE
Q 018593 249 LE-CDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH---KQVLVYHRNGRLW 324 (353)
Q Consensus 249 ~~-~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~yd~~~~~~ 324 (353)
.. .+|+..+....+..+.+|...... ..+..+..... ....+..+.....++.++.+.+. +.+.+||+++++.
T Consensus 237 ~~~~~g~~l~s~~~D~~v~i~~~~~~~-~~~~~~~~~~~--~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~ 313 (420)
T 4gga_A 237 RWAPDGRHLASGGNDNLVNVWPSAPGE-GGWVPLQTFTQ--HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC 313 (420)
T ss_dssp EECTTSSEEEEEETTSCEEEEESSCCS-SCSCCSEEECC--CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE
T ss_pred eecCCCCeeeeeeccccceEEeecccc-ccceeeeeecc--cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc
Confidence 22 246666666677888999764322 22211111111 11112222012234554444432 3488999998876
Q ss_pred EEeee
Q 018593 325 KEMYS 329 (353)
Q Consensus 325 ~~v~~ 329 (353)
.....
T Consensus 314 ~~~~~ 318 (420)
T 4gga_A 314 LSAVD 318 (420)
T ss_dssp EEEEE
T ss_pred ceeec
Confidence 65533
No 48
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=92.36 E-value=5.1 Score=34.76 Aligned_cols=189 Identities=12% Similarity=0.042 Sum_probs=98.5
Q ss_pred eEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEE
Q 018593 97 LLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLV 176 (353)
Q Consensus 97 ll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~v 176 (353)
.+++.. .....+.+||..+++....-.... ... .+.+++.. -.+++.+ .....+.+
T Consensus 3 ~l~vs~-~~d~~v~v~d~~~~~~~~~~~~~~---------~~~---~~~~s~dg--~~l~~~~---------~~d~~i~v 58 (391)
T 1l0q_A 3 FAYIAN-SESDNISVIDVTSNKVTATIPVGS---------NPM---GAVISPDG--TKVYVAN---------AHSNDVSI 58 (391)
T ss_dssp EEEEEE-TTTTEEEEEETTTTEEEEEEECSS---------SEE---EEEECTTS--SEEEEEE---------GGGTEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCeEEEEeecCC---------Ccc---eEEECCCC--CEEEEEC---------CCCCeEEE
Confidence 444443 456789999999887654322111 111 45554432 2333332 11457889
Q ss_pred EEcCCCcEEEeeeccccceeeeeecCceEEEcce-EEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CC
Q 018593 177 FDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGA-LHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DG 253 (353)
Q Consensus 177 y~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~-ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g 253 (353)
++..+++-...-..... +...... -+|. +|..+.....|..+|+.+++.... .... ....+... +|
T Consensus 59 ~d~~~~~~~~~~~~~~~-v~~~~~s-----pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg 127 (391)
T 1l0q_A 59 IDTATNNVIATVPAGSS-PQGVAVS-----PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-----SPLGLALSPDG 127 (391)
T ss_dssp EETTTTEEEEEEECSSS-EEEEEEC-----TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTS
T ss_pred EECCCCeEEEEEECCCC-ccceEEC-----CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-----CcceEEECCCC
Confidence 99888755333111111 1111111 1344 555554435899999998765433 3221 12333333 46
Q ss_pred EEE-EEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--CcEEEEECCCCeEEEeee
Q 018593 254 CLS-VIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 254 ~L~-~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~~~~~v~~ 329 (353)
+.. +....+..+.+|.+.. .+. +..+... .....+ .+..++..+++... +.+.+||+++++......
T Consensus 128 ~~l~~~~~~~~~v~~~d~~~---~~~--~~~~~~~---~~~~~~-~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 197 (391)
T 1l0q_A 128 KKLYVTNNGDKTVSVINTVT---KAV--INTVSVG---RSPKGI-AVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK 197 (391)
T ss_dssp SEEEEEETTTTEEEEEETTT---TEE--EEEEECC---SSEEEE-EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CEEEEEeCCCCEEEEEECCC---CcE--EEEEecC---CCcceE-EECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 544 4444677888985532 322 2333321 112234 55667776655543 349999999987665543
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.35 E-value=5.4 Score=35.00 Aligned_cols=185 Identities=13% Similarity=0.034 Sum_probs=93.6
Q ss_pred CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcE
Q 018593 105 EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRW 184 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W 184 (353)
..+.+.+||..+++...+-..... .... .+.+.+. +.+ ++.+. ....+.+|+..++.-
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~-------~~v~---~v~~s~~-~~~--l~~~~---------~dg~i~iwd~~~~~~ 168 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDES-------TYVA---SVKWSHD-GSF--LSVGL---------GNGLVDIYDVESQTK 168 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTT-------CCEE---EEEECTT-SSE--EEEEE---------TTSCEEEEETTTCCE
T ss_pred CCCeEEEeeCCCCcEeEeeecCCC-------CCEE---EEEECCC-CCE--EEEEC---------CCCeEEEEECcCCeE
Confidence 567899999999987665443211 1122 4555552 222 22221 134788999887653
Q ss_pred EEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCC
Q 018593 185 RKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDE 263 (353)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~ 263 (353)
...- ... ...-..+..++.+...+.....|..+|+.+..-....+..... .-..+... +|++.+++..+.
T Consensus 169 ~~~~--~~~-----~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 169 LRTM--AGH-----QARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS--EVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp EEEE--CCC-----SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--CEEEEEECTTSSEEEEEETTS
T ss_pred EEEe--cCC-----CCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC--CeeEEEEcCCCCEEEEEeCCC
Confidence 3220 100 0011133445555555555568999999843322222211110 11223333 467666666778
Q ss_pred eEEEEEEecCCCCCeEEEEeeccccccCccceeeeeec-CCcEEEEEe---CCcEEEEECCCCeEEEee
Q 018593 264 WMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQ-TREYVFLAT---HKQVLVYHRNGRLWKEMY 328 (353)
Q Consensus 264 ~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-~~~~v~~~~---~~~~~~yd~~~~~~~~v~ 328 (353)
.+.+|.+... ..+..+.. ....+..+ .+.. +..++.... ++.+.+||+++++.....
T Consensus 240 ~v~iwd~~~~-----~~~~~~~~--~~~~v~~~-~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~ 300 (401)
T 4aez_A 240 VVQIWDARSS-----IPKFTKTN--HNAAVKAV-AWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV 300 (401)
T ss_dssp CEEEEETTCS-----SEEEEECC--CSSCCCEE-EECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE
T ss_pred eEEEccCCCC-----CccEEecC--CcceEEEE-EECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 8999966431 12222221 22223334 4444 344344433 455999999988665443
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.34 E-value=4.8 Score=34.37 Aligned_cols=152 Identities=11% Similarity=0.162 Sum_probs=81.2
Q ss_pred cceEEEEEcC-CCcEEEeeeccccceeeeeecCceEEEcce-EEeeecCCCEEEEEECC--CceEEEe----eCCCCCCC
Q 018593 171 TFKCLVFDSE-SNRWRKFVSVQDYYQFSIMNRNQVVFVNGA-LHWLTDSCSFILALDLE--GDVWRKI----SLPDKVGS 242 (353)
Q Consensus 171 ~~~~~vy~s~-~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~-ly~~~~~~~~i~~~D~~--~~~~~~~----~~P~~~~~ 242 (353)
...+.+|+.. ++................. .-.+.-+|. +|........+..||.. +.++..+ ..|.....
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~--~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPR--HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEE--EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCc--eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 4478889887 5666544211100000000 011222565 66655544566666655 4666544 23332111
Q ss_pred C-CceeEEEE-CCE-EEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--CcEEEE
Q 018593 243 E-SRSYLLEC-DGC-LSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQVLVY 317 (353)
Q Consensus 243 ~-~~~~l~~~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~y 317 (353)
. ....+... +|+ |++.......+.+|.++.. ..+..+..++..+ .....+ .+..+|+.+++... +.+.+|
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~--g~~~~~~~~~~~~--~~~~~~-~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD--GHLTLIQQISTEG--DFPRDF-DLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG--GCEEEEEEEECSS--SCCCEE-EECTTSSEEEEEETTTTEEEEE
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC--CcEEEeEEEecCC--CCcCeE-EECCCCCEEEEEEcCCCcEEEE
Confidence 1 12233333 476 5555556789999988643 3566666665421 112345 67778886777654 346666
Q ss_pred --ECCCCeEEEeee
Q 018593 318 --HRNGRLWKEMYS 329 (353)
Q Consensus 318 --d~~~~~~~~v~~ 329 (353)
|.++++.+.+..
T Consensus 314 ~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 314 ARDLTSGKLSLLQK 327 (347)
T ss_dssp EECTTTCCEEEEEE
T ss_pred EEeCCCCeEEeccc
Confidence 888999987754
No 51
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.29 E-value=5.6 Score=35.07 Aligned_cols=193 Identities=12% Similarity=0.093 Sum_probs=99.1
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
+.+|-+++.. .....+.+||+.+++... ++.... ... ++.+++.. . .+++.+ ...
T Consensus 178 ~~~~~~~~s~-~~d~~v~~~d~~~~~~~~~~~~~~~---------~~~---~~~~~~~~-~-~l~~~~---------~~~ 233 (433)
T 3bws_A 178 PEHNELWVSQ-MQANAVHVFDLKTLAYKATVDLTGK---------WSK---ILLYDPIR-D-LVYCSN---------WIS 233 (433)
T ss_dssp GGGTEEEEEE-GGGTEEEEEETTTCCEEEEEECSSS---------SEE---EEEEETTT-T-EEEEEE---------TTT
T ss_pred cCCCEEEEEE-CCCCEEEEEECCCceEEEEEcCCCC---------Cee---EEEEcCCC-C-EEEEEe---------cCC
Confidence 3455555553 345688999988876543 321111 111 45555532 2 333332 113
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeec--------CCCEEEEEECCCceEEEe-eCCCCCCC
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTD--------SCSFILALDLEGDVWRKI-SLPDKVGS 242 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~--------~~~~i~~~D~~~~~~~~~-~~P~~~~~ 242 (353)
..+.+||.+++.....-..... +..... .-+|...+.+. ....|..||+.+.+.... ..+..
T Consensus 234 ~~i~~~d~~~~~~~~~~~~~~~-~~~~~~-----~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~--- 304 (433)
T 3bws_A 234 EDISVIDRKTKLEIRKTDKIGL-PRGLLL-----SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN--- 304 (433)
T ss_dssp TEEEEEETTTTEEEEECCCCSE-EEEEEE-----CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC---
T ss_pred CcEEEEECCCCcEEEEecCCCC-ceEEEE-----cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC---
Confidence 4788999888765333110111 111111 11343333333 123788999988764333 22221
Q ss_pred CCceeEEEE-CC-EEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC---------
Q 018593 243 ESRSYLLEC-DG-CLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--------- 311 (353)
Q Consensus 243 ~~~~~l~~~-~g-~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--------- 311 (353)
...+... +| .|++....+..+.+|.++. ...+..++.. .....+ .+..++..+++...
T Consensus 305 --~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-----~~~~~~~~~~---~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~ 373 (433)
T 3bws_A 305 --KRHIVSGNTENKIYVSDMCCSKIEVYDLKE-----KKVQKSIPVF---DKPNTI-ALSPDGKYLYVSCRGPNHPTEGY 373 (433)
T ss_dssp --EEEEEECSSTTEEEEEETTTTEEEEEETTT-----TEEEEEEECS---SSEEEE-EECTTSSEEEEEECCCCCTTTCT
T ss_pred --cceEEECCCCCEEEEEecCCCEEEEEECCC-----CcEEEEecCC---CCCCeE-EEcCCCCEEEEEecCCCcccccc
Confidence 1223332 35 4555555778899996532 2344444431 112234 56677876776654
Q ss_pred -------CcEEEEECCCCeEEEeee
Q 018593 312 -------KQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 312 -------~~~~~yd~~~~~~~~v~~ 329 (353)
+.+.+||+++++......
T Consensus 374 ~~~g~~dg~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 374 LKKGLVLGKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp TSCCSSCCEEEEEETTTTEEEEEEE
T ss_pred ccccccceEEEEEECCCCcEEEEec
Confidence 269999999987765543
No 52
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.15 E-value=2.9 Score=34.87 Aligned_cols=110 Identities=11% Similarity=-0.034 Sum_probs=68.8
Q ss_pred EEcceEEeeecCCCEEEEEECCCceE-EEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEee
Q 018593 206 FVNGALHWLTDSCSFILALDLEGDVW-RKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 206 ~~~g~ly~~~~~~~~i~~~D~~~~~~-~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i 284 (353)
+.++.||.-++....|.++|+.+++- ..+ +|... ..--+...+++|+++...+..+-++ |. ..-.++.++
T Consensus 62 ~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~---FgeGit~~g~~Ly~ltw~~~~v~V~---D~--~Tl~~~~ti 132 (268)
T 3nok_A 62 FHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI---FAEGLASDGERLYQLTWTEGLLFTW---SG--MPPQRERTT 132 (268)
T ss_dssp EETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC---CEEEEEECSSCEEEEESSSCEEEEE---ET--TTTEEEEEE
T ss_pred EECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc---ceeEEEEeCCEEEEEEccCCEEEEE---EC--CcCcEEEEE
Confidence 34677888777666799999998764 333 55433 2334566778999987666655554 32 234566777
Q ss_pred ccccccCccceeeeeecCCcEEEEEe-CCcEEEEECCCCeEEEeeee
Q 018593 285 SLRCIKGMVPSIFPISQTREYVFLAT-HKQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd~~~~~~~~v~~~ 330 (353)
+.+.. +. ++..+++.+++.. .+.+..+|++|.+...--.+
T Consensus 133 ~~~~e-----Gw-GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 133 RYSGE-----GW-GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp ECSSC-----CC-CEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred eCCCc-----ee-EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 76321 22 4444555566654 34499999999766654444
No 53
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.09 E-value=1.6 Score=37.95 Aligned_cols=196 Identities=10% Similarity=0.047 Sum_probs=85.2
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
+|-+++.. .....+.|||..++++..+-..... ..... .+.+.+.. . .++..+ ....+
T Consensus 22 ~g~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~h------~~~v~---~~~~s~~~-~-~l~s~s----------~d~~v 79 (377)
T 3dwl_C 22 QRTEFVTT-TATNQVELYEQDGNGWKHARTFSDH------DKIVT---CVDWAPKS-N-RIVTCS----------QDRNA 79 (377)
T ss_dssp SSSEEECC-CSSSCBCEEEEETTEEEECCCBCCC------SSCEE---EEEECTTT-C-CEEEEE----------TTSSE
T ss_pred CCCEEEEe-cCCCEEEEEEccCCceEEEEEEecC------CceEE---EEEEeCCC-C-EEEEEe----------CCCeE
Confidence 34444332 3456788999988754443332211 11122 45555542 2 233221 13467
Q ss_pred EEEEcCCCc-EEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCce----EEEeeCCCCCCCCCcee
Q 018593 175 LVFDSESNR-WRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDV----WRKISLPDKVGSESRSY 247 (353)
Q Consensus 175 ~vy~s~~~~-W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~----~~~~~~P~~~~~~~~~~ 247 (353)
.+|+..++. |......... .... ..+.+ +|.....+..+..|..+|+.+++ ...+..|... .-..
T Consensus 80 ~vwd~~~~~~~~~~~~~~~~-~~~v----~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~---~v~~ 151 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTLVLLRL-NRAA----TFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS---TILS 151 (377)
T ss_dssp EEC------CCCCEEECCCC-SSCE----EEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS---CEEE
T ss_pred EEEEcCCCCceeeeeEeccc-CCce----EEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC---CeEE
Confidence 788887766 5443111110 0000 01111 34333333333478888888765 2222222211 1223
Q ss_pred EEEE-CCEEEEEEecCCeEEEEEEecCCC------CCeE-------EEEeeccccccCccceeeeeecCCcEEEEEeC-C
Q 018593 248 LLEC-DGCLSVIEISDEWMETWVLKDYYR------DEWH-------SVDKVSLRCIKGMVPSIFPISQTREYVFLATH-K 312 (353)
Q Consensus 248 l~~~-~g~L~~v~~~~~~~~vw~l~~~~~------~~W~-------~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 312 (353)
+... +|++.+.+..+..+.+|.++..+. ..|. .+..+ .....+..+ .+..++..++.... +
T Consensus 152 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~-~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 152 LDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---PSGGWVHAV-GFSPSGNALAYAGHDS 227 (377)
T ss_dssp EEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---CCSSSEEEE-EECTTSSCEEEEETTT
T ss_pred EEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc---cCCceEEEE-EECCCCCEEEEEeCCC
Confidence 3333 466666666778899998853211 1221 22222 222223334 55667775555554 4
Q ss_pred cEEEEECCCCeE
Q 018593 313 QVLVYHRNGRLW 324 (353)
Q Consensus 313 ~~~~yd~~~~~~ 324 (353)
.+.+||+++++-
T Consensus 228 ~i~iwd~~~~~~ 239 (377)
T 3dwl_C 228 SVTIAYPSAPEQ 239 (377)
T ss_dssp EEC-CEECSTTS
T ss_pred cEEEEECCCCCC
Confidence 589999988764
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.06 E-value=4.5 Score=36.06 Aligned_cols=185 Identities=12% Similarity=0.052 Sum_probs=89.3
Q ss_pred CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcE
Q 018593 105 EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRW 184 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W 184 (353)
..+.+.|||..+++...+-.... +..... .+.+.+..+. .++..+ ....+.++|.+++.-
T Consensus 140 ~dg~i~lWd~~~~~~~~~~~~~g------H~~~V~---~l~f~p~~~~-~l~s~s----------~D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 140 KGGDIMLWNFGIKDKPTFIKGIG------AGGSIT---GLKFNPLNTN-QFYASS----------MEGTTRLQDFKGNIL 199 (435)
T ss_dssp TTSCEEEECSSCCSCCEEECCCS------SSCCCC---EEEECSSCTT-EEEEEC----------SSSCEEEEETTSCEE
T ss_pred CCCEEEEEECCCCCceeEEEccC------CCCCEE---EEEEeCCCCC-EEEEEe----------CCCEEEEeeccCCce
Confidence 55678999998877544322211 112222 4566554333 344321 134677888877655
Q ss_pred EEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCcee-EEEE-CCE-EEEEEec
Q 018593 185 RKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSY-LLEC-DGC-LSVIEIS 261 (353)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~-l~~~-~g~-L~~v~~~ 261 (353)
+........ . .....-.+.-+|.+...+.....|..+|+.++.... +..+. .... +... +|. +.+.+..
T Consensus 200 ~~~~~~~~~-~--~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~--~~~h~---~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 200 RVFASSDTI-N--IWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWN--LRMHK---KKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp EEEECCSSC-S--CCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCC--SBCCS---SCEEEEEECTTCSSEEEEEET
T ss_pred eEEeccCCC-C--ccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEE--Eeccc---ceEEeeeecCCCceEEEEecC
Confidence 444211110 0 000000112245555555554578889987653221 21111 1222 2222 344 4444456
Q ss_pred CCeEEEEEEecCCC-CCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCe
Q 018593 262 DEWMETWVLKDYYR-DEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 262 ~~~~~vw~l~~~~~-~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
+..+.||.+..... ... ....+....+..+ ++..+|..++.... +.+.+||.++.+
T Consensus 272 d~~v~iwd~~~~~~~~~~-----~~~~~h~~~v~~~-~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASF-----LYSLPHRHPVNAA-CFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp TSBCCEEETTTCCSSSCC-----SBCCBCSSCEEEC-CBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred cceeeEEecccccccceE-----EEeeeccccccce-eECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 77889996643221 110 0001222223334 55667776665554 459999998764
No 55
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=92.02 E-value=3.7 Score=34.27 Aligned_cols=110 Identities=10% Similarity=-0.015 Sum_probs=61.3
Q ss_pred cce-EEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 208 NGA-LHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 208 ~g~-ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
+|. +||.......|..||+.++ ...+..|... ...+... +|+|++.......+.+| +..+.+........
T Consensus 38 ~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~----~~~l~~~~dg~l~v~~~~~~~i~~~---d~~~g~~~~~~~~~ 109 (296)
T 3e5z_A 38 ARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHH----QNGHCLNKQGHLIACSHGLRRLERQ---REPGGEWESIADSF 109 (296)
T ss_dssp GGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSS----EEEEEECTTCCEEEEETTTTEEEEE---CSTTCCEEEEECEE
T ss_pred CCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCC----cceeeECCCCcEEEEecCCCeEEEE---cCCCCcEEEEeecc
Confidence 454 8998876568999999998 7666554432 2334443 58887665455666666 32224444332211
Q ss_pred cccccCccceeeeeecCCcEEEEE----e--------------CCcEEEEECCCCeEEEe
Q 018593 286 LRCIKGMVPSIFPISQTREYVFLA----T--------------HKQVLVYHRNGRLWKEM 327 (353)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~v~~~----~--------------~~~~~~yd~~~~~~~~v 327 (353)
..........+ .+..+|.+++.. + .+.++.||++ ++.+.+
T Consensus 110 ~~~~~~~~~~i-~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 110 EGKKLNSPNDV-CLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp TTEECCCCCCE-EECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred CCCCCCCCCCE-EECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 11111112334 566788844431 1 2358888887 665554
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.91 E-value=5.5 Score=34.11 Aligned_cols=142 Identities=13% Similarity=0.158 Sum_probs=75.4
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--c--ceEEeeecCCCEEEEEECCCceE-EEeeCCCCCCCCCc
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--N--GALHWLTDSCSFILALDLEGDVW-RKISLPDKVGSESR 245 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~--g~ly~~~~~~~~i~~~D~~~~~~-~~~~~P~~~~~~~~ 245 (353)
...+.+|+..++.|......... ... -..+.+ + |.+...+.....|..+|+.+..- ....+..... .-
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~-~~~----v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~--~v 150 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVH-SAS----VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI--GV 150 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCC-SSC----EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT--CE
T ss_pred CCEEEEEEcCCCceeEeeeecCC-Ccc----eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC--ce
Confidence 34688999999888666322111 000 012222 1 44444444445888999887621 1111111110 11
Q ss_pred eeEEEE--------------CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecC---CcEEEE
Q 018593 246 SYLLEC--------------DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQT---REYVFL 308 (353)
Q Consensus 246 ~~l~~~--------------~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~---~~~v~~ 308 (353)
..+... +|.+.+++..+..+.+|.+.... ..|.....+.. ....+..+ .+..+ +..++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~--h~~~v~~~-~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA-QTYVLESTLEG--HSDWVRDV-AWSPTVLLRSYLAS 226 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT-TEEEEEEEECC--CSSCEEEE-EECCCCSSSEEEEE
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC-cceeeEEEEec--ccCcEeEE-EECCCCCCCCeEEE
Confidence 222222 47777777777899999885432 55666655543 22222334 45555 665555
Q ss_pred EeC-CcEEEEECCCCe
Q 018593 309 ATH-KQVLVYHRNGRL 323 (353)
Q Consensus 309 ~~~-~~~~~yd~~~~~ 323 (353)
... +.+.+||+++++
T Consensus 227 ~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 227 VSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp EETTSCEEEEEESSTT
T ss_pred EeCCCEEEEEeCCCCC
Confidence 553 459999999873
No 57
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=91.66 E-value=5.9 Score=34.02 Aligned_cols=116 Identities=9% Similarity=0.107 Sum_probs=68.6
Q ss_pred cce-EEeeecCCCEEEEEECCCceEEEe-eCCCCCCCC-CceeEEEE-CCEEEEEEe-c-CCeEEEEEEecCCCCCeEEE
Q 018593 208 NGA-LHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSE-SRSYLLEC-DGCLSVIEI-S-DEWMETWVLKDYYRDEWHSV 281 (353)
Q Consensus 208 ~g~-ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~-~~~~l~~~-~g~L~~v~~-~-~~~~~vw~l~~~~~~~W~~~ 281 (353)
+|. +|........|..||+.++++..+ .++...... ....+... +|+..++.. . ...+.+|.++.. ...+..+
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-~g~~~~~ 299 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET-NGTLTKV 299 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT-TCCEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC-CCcEEEe
Confidence 564 666664445899999988877655 222211100 12234443 576544444 5 688999988532 2566666
Q ss_pred EeeccccccCccceeeeeecCCcEEEEEeC--Cc--EEEEECCCCeEEEee
Q 018593 282 DKVSLRCIKGMVPSIFPISQTREYVFLATH--KQ--VLVYHRNGRLWKEMY 328 (353)
Q Consensus 282 ~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~--~~~yd~~~~~~~~v~ 328 (353)
..++. ......+ .+..+|+.+++... +. ++.+|+++++.+.+.
T Consensus 300 ~~~~~---g~~~~~~-~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 300 GYQLT---GIHPRNF-IITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEEC---SSCCCEE-EECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred eEecC---CCCCceE-EECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 66654 1222345 67778887777653 33 444788899988774
No 58
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=91.64 E-value=6.2 Score=34.22 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=74.5
Q ss_pred ceEEEEEcCCC--cEEEeeeccccceeee-------eecCceEEEcceEEeeecCCCEEEEEECCCce--EEEeeCCCCC
Q 018593 172 FKCLVFDSESN--RWRKFVSVQDYYQFSI-------MNRNQVVFVNGALHWLTDSCSFILALDLEGDV--WRKISLPDKV 240 (353)
Q Consensus 172 ~~~~vy~s~~~--~W~~~~~~~~~~~~~~-------~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~--~~~~~~P~~~ 240 (353)
..+..++.+++ .|+.. ... +... .....++..+|.+|..+..+ .+.++|..+++ |+. +.+
T Consensus 198 g~l~~~d~~tG~~~w~~~---~~~-~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g-~l~~~d~~tG~~~w~~-~~~--- 268 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQR---ISQ-ATGSTEIDRLSDVDTTPVVVNGVVFALAYNG-NLTALDLRSGQIMWKR-ELG--- 268 (376)
T ss_dssp TEEEEEETTTCCEEEEEE---CCC------------CCCCCCEEETTEEEEECTTS-CEEEEETTTCCEEEEE-CCC---
T ss_pred CEEEEEECCCCcEEEEEe---ccc-CCCCcccccccccCCCcEEECCEEEEEecCc-EEEEEECCCCcEEeec-cCC---
Confidence 46777887665 57765 221 1110 12234677889998887664 89999998765 443 222
Q ss_pred CCCCceeEEEECCEEEEEEecCCeEEEEEEec-CCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEE
Q 018593 241 GSESRSYLLECDGCLSVIEISDEWMETWVLKD-YYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYH 318 (353)
Q Consensus 241 ~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~-~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd 318 (353)
....++..+|.|++.... .. ++.++. .+...|... .... .....+. ..++. +++.+. +.++.+|
T Consensus 269 ---~~~~~~~~~~~l~~~~~~-g~--l~~~d~~tG~~~w~~~---~~~~-~~~~~~~---~~~~~-l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 269 ---SVNDFIVDGNRIYLVDQN-DR--VMALTIDGGVTLWTQS---DLLH-RLLTSPV---LYNGN-LVVGDSEGYLHWIN 334 (376)
T ss_dssp ---CEEEEEEETTEEEEEETT-CC--EEEEETTTCCEEEEEC---TTTT-SCCCCCE---EETTE-EEEECTTSEEEEEE
T ss_pred ---CCCCceEECCEEEEEcCC-Ce--EEEEECCCCcEEEeec---ccCC-CcccCCE---EECCE-EEEEeCCCeEEEEE
Confidence 123455667888876542 23 333432 222446532 0111 1111122 12455 666665 4599999
Q ss_pred CCCCeEEEeeee
Q 018593 319 RNGRLWKEMYSV 330 (353)
Q Consensus 319 ~~~~~~~~v~~~ 330 (353)
+++++...-..+
T Consensus 335 ~~tG~~~~~~~~ 346 (376)
T 3q7m_A 335 VEDGRFVAQQKV 346 (376)
T ss_dssp TTTCCEEEEEEC
T ss_pred CCCCcEEEEEec
Confidence 999987665554
No 59
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.52 E-value=8.7 Score=35.65 Aligned_cols=115 Identities=9% Similarity=0.035 Sum_probs=68.1
Q ss_pred cce-EEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEEC-CEEEEEEe-cCCeEEEEEEecCCC--CCeEEE
Q 018593 208 NGA-LHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLECD-GCLSVIEI-SDEWMETWVLKDYYR--DEWHSV 281 (353)
Q Consensus 208 ~g~-ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~-g~L~~v~~-~~~~~~vw~l~~~~~--~~W~~~ 281 (353)
+|. +|........|.++|..+++.... +............+..-+ |.+++... .+..+.||.++..+. ..|..+
T Consensus 334 dg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v 413 (543)
T 1nir_A 334 SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKV 413 (543)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred CCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEE
Confidence 465 444443335899999999875443 432111100122333233 66665554 568899997744221 359999
Q ss_pred EeeccccccCccceeeeeecCCcEEEEEe--------CCcEEEEECCCCeEE
Q 018593 282 DKVSLRCIKGMVPSIFPISQTREYVFLAT--------HKQVLVYHRNGRLWK 325 (353)
Q Consensus 282 ~~i~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~yd~~~~~~~ 325 (353)
.+++..+-. ...+ .+..++..+++.. .+.+.+||.+|.+..
T Consensus 414 ~~l~~~g~~--~~~v-~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 414 AELQGQGGG--SLFI-KTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EEEECSCSC--CCCE-ECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEEEcCCCC--ceEE-EcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 888864311 2234 5667888788765 346999999987644
No 60
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.39 E-value=6.5 Score=33.97 Aligned_cols=196 Identities=11% Similarity=-0.059 Sum_probs=83.3
Q ss_pred cCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcce
Q 018593 94 CNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFK 173 (353)
Q Consensus 94 ~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (353)
.+|.++.. ...+.+.|||..+++.......... .+..... .+.+.+. +-.++..+ ....
T Consensus 104 ~d~~~l~~--s~dg~v~lWd~~~~~~~~~~~~~~~----~h~~~V~---~v~~spd--g~~l~sgs----------~dg~ 162 (357)
T 4g56_B 104 SEKGILVA--SDSGAVELWEILEKESLLVNKFAKY----EHDDIVK---TLSVFSD--GTQAVSGG----------KDFS 162 (357)
T ss_dssp TTTEEEEE--ETTSCEEEC--------CCCCEEEC----CCSSCEE---EEEECSS--SSEEEEEE----------TTSC
T ss_pred CCCCEEEE--ECCCEEEEeeccccceeEEEeeccC----CCCCCEE---EEEECCC--CCEEEEEe----------CCCe
Confidence 34555544 2456799999988875543332211 1111222 4555443 22233321 1346
Q ss_pred EEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cc-eEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEE
Q 018593 174 CLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NG-ALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLL 249 (353)
Q Consensus 174 ~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g-~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~ 249 (353)
+.+|+..++.-... ...- .. .-..+.+ ++ .+...+..+..|..+|+.+.+-... ....... ....+.
T Consensus 163 v~iwd~~~~~~~~~--~~~h-~~----~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~--~v~~v~ 233 (357)
T 4g56_B 163 VKVWDLSQKAVLKS--YNAH-SS----EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDT--IPTSVT 233 (357)
T ss_dssp EEEEETTTTEEEEE--ECCC-SS----CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCS--CEEEEE
T ss_pred EEEEECCCCcEEEE--EcCC-CC----CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccc--cccchh
Confidence 78888887643222 0000 00 0001222 12 2233333334788888877543221 1111110 112233
Q ss_pred EE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCC-cEEEEEe-CCcEEEEECCCCeEE
Q 018593 250 EC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTR-EYVFLAT-HKQVLVYHRNGRLWK 325 (353)
Q Consensus 250 ~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~-~~v~~~~-~~~~~~yd~~~~~~~ 325 (353)
-. ++.+.+++..+..+.+|.+.... .+..+. .....+..+ .+..++ .++.... ++.+.+||.++++..
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~-----~~~~~~--~~~~~v~~l-~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPD-----SAQTSA--VHSQNITGL-AYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGG-----GCEEEC--CCSSCEEEE-EECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred hhhcccceEEEeecccceeEEECCCCc-----EeEEEe--ccceeEEEE-EEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 22 35666555577789999664321 111121 122222233 444444 4344444 355999999998765
Q ss_pred Ee
Q 018593 326 EM 327 (353)
Q Consensus 326 ~v 327 (353)
..
T Consensus 306 ~~ 307 (357)
T 4g56_B 306 RD 307 (357)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 61
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=91.27 E-value=5.8 Score=33.13 Aligned_cols=187 Identities=13% Similarity=0.111 Sum_probs=90.2
Q ss_pred CceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEE
Q 018593 106 MGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWR 185 (353)
Q Consensus 106 ~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~ 185 (353)
...+.++||.+++...+..+... ....... ++.+++..+ +++... . ...+.+|+.. ++.+
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~----~~~~~~~---~i~~~~~~g--~l~v~~--------~--~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVN----GYGGIPA---GCQCDRDAN--QLFVAD--------M--RLGLLVVQTD-GTFE 104 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEET----TEECCEE---EEEECSSSS--EEEEEE--------T--TTEEEEEETT-SCEE
T ss_pred CCEEEEEeCCCCcEEEEEecccC----CCCCCCc---eEEEecCCC--cEEEEE--------C--CCCEEEEeCC-CCEE
Confidence 45788999988887665431100 0001111 566655312 333331 1 1267788887 7655
Q ss_pred Ee-eeccccceeeeeecCceEEE--cceEEeeecCC---------------CEEEEEECCCceEEEeeCCCCCCCCCcee
Q 018593 186 KF-VSVQDYYQFSIMNRNQVVFV--NGALHWLTDSC---------------SFILALDLEGDVWRKISLPDKVGSESRSY 247 (353)
Q Consensus 186 ~~-~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~---------------~~i~~~D~~~~~~~~~~~P~~~~~~~~~~ 247 (353)
.. ...... ........+.+ +|.+|+..... ..+..+|+. ++...+.-... ....
T Consensus 105 ~~~~~~~~~---~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~----~~~~ 176 (314)
T 1pjx_A 105 EIAKKDSEG---RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ----FPNG 176 (314)
T ss_dssp ECCSBCTTS---CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES----SEEE
T ss_pred EEEeccCCC---ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC----Ccce
Confidence 43 211100 00111123333 57777765432 378899987 55544311100 1122
Q ss_pred EEEE-----CC-EEEEEEecCCeEEEEEEecCCCCCeEEEEeec-ccccc-CccceeeeeecCCcEEEEEe--CCcEEEE
Q 018593 248 LLEC-----DG-CLSVIEISDEWMETWVLKDYYRDEWHSVDKVS-LRCIK-GMVPSIFPISQTREYVFLAT--HKQVLVY 317 (353)
Q Consensus 248 l~~~-----~g-~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~-~~~~~-~~~~~~~~~~~~~~~v~~~~--~~~~~~y 317 (353)
+... +| .|++.......+.+|.++.. ........+. .+... .....+ +++.+|. +++.. .+.+..|
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~--g~~~~~~~~~~~~~~~~~~p~~i-~~d~~G~-l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP--AKIENKKVWGHIPGTHEGGADGM-DFDEDNN-LLVANWGSSHIEVF 252 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEET--TEEEEEEEEEECCCCSSCEEEEE-EEBTTCC-EEEEEETTTEEEEE
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCC--CccccceEEEECCCCCCCCCCce-EECCCCC-EEEEEcCCCEEEEE
Confidence 3333 45 45555445667777766422 2232221111 11111 222345 6677888 55553 4569999
Q ss_pred ECCCCeE
Q 018593 318 HRNGRLW 324 (353)
Q Consensus 318 d~~~~~~ 324 (353)
|+++++.
T Consensus 253 d~~~g~~ 259 (314)
T 1pjx_A 253 GPDGGQP 259 (314)
T ss_dssp CTTCBSC
T ss_pred cCCCCcE
Confidence 9996544
No 62
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=91.20 E-value=6.1 Score=33.28 Aligned_cols=153 Identities=9% Similarity=0.047 Sum_probs=83.1
Q ss_pred cceEEEEEcCC-CcEEEee--eccccceeeeeecCceEEE--cce-EEeeecCCCEEEEEECCC--ceEEE---e-eCCC
Q 018593 171 TFKCLVFDSES-NRWRKFV--SVQDYYQFSIMNRNQVVFV--NGA-LHWLTDSCSFILALDLEG--DVWRK---I-SLPD 238 (353)
Q Consensus 171 ~~~~~vy~s~~-~~W~~~~--~~~~~~~~~~~~~~~~v~~--~g~-ly~~~~~~~~i~~~D~~~--~~~~~---~-~~P~ 238 (353)
...+.+|+..+ +...... .... +.. .....+.+ +|. +|........+..||+.. .++.. + .+|.
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTT--VEG--AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE 225 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEEC--STT--CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT
T ss_pred CCEEEEEEecCCCceeeeccccccc--CCC--CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc
Confidence 34688899877 7665431 1000 000 00001222 454 666654445899999853 44332 2 2444
Q ss_pred CCCCCCce-eEEEE-CCEEEEEEe-cCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--Cc
Q 018593 239 KVGSESRS-YLLEC-DGCLSVIEI-SDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQ 313 (353)
Q Consensus 239 ~~~~~~~~-~l~~~-~g~L~~v~~-~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~ 313 (353)
........ .+... +|+..++.. .+..+.+|.++.. ...+..+..++.... ...+ .+..+|..+++... +.
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~-~~~~~~~~~~~~~~~---~~~~-~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSED-GSVLSKEGFQPTETQ---PRGF-NVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-SCCEEEEEEEECSSS---CCCE-EECTTSSEEEEECTTTCE
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCC-CCceEEeeeecCCCc---cceE-EECCCCCEEEEecCCCCe
Confidence 32111112 23333 354444444 6789999988542 255667666664221 2345 66778886777653 34
Q ss_pred EEEE--ECCCCeEEEeeeecc
Q 018593 314 VLVY--HRNGRLWKEMYSVKY 332 (353)
Q Consensus 314 ~~~y--d~~~~~~~~v~~~~~ 332 (353)
+.+| |.++++++.+..++.
T Consensus 301 v~v~~~d~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 301 ISVYEIVGEQGLLHEKGRYAV 321 (343)
T ss_dssp EEEEEEETTTTEEEEEEEEEC
T ss_pred EEEEEEcCCCceeeEcccccc
Confidence 6666 888999998877654
No 63
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.77 E-value=6.1 Score=32.56 Aligned_cols=194 Identities=10% Similarity=0.050 Sum_probs=100.3
Q ss_pred EeeecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCC
Q 018593 90 VRASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPD 169 (353)
Q Consensus 90 ~~~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 169 (353)
+....+|-+.+.. .....+.++||. ++...++.+... .... ++..|+.. +++... .
T Consensus 25 i~~d~~g~l~v~~-~~~~~v~~~~~~-~~~~~~~~~~~~-------~~~~---~i~~~~~g---~l~v~~---------~ 80 (300)
T 2qc5_A 25 ITSSEDGKVWFTQ-HKANKISSLDQS-GRIKEFEVPTPD-------AKVM---CLIVSSLG---DIWFTE---------N 80 (300)
T ss_dssp EEECTTSCEEEEE-TTTTEEEEECTT-SCEEEEECSSTT-------CCEE---EEEECTTS---CEEEEE---------T
T ss_pred eeECCCCCEEEEc-CCCCeEEEECCC-CceEEEECCCCC-------Ccce---eEEECCCC---CEEEEe---------c
Confidence 3344567666664 345788999998 766654432111 1111 45555432 233321 1
Q ss_pred CcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCcee
Q 018593 170 GTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSY 247 (353)
Q Consensus 170 ~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~ 247 (353)
....+..|+.. +..+........ .....+.+ +|.+|+.......|..||+. ++...+.+|.... ....
T Consensus 81 ~~~~v~~~d~~-g~~~~~~~~~~~------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~--~~~~ 150 (300)
T 2qc5_A 81 GANKIGKLSKK-GGFTEYPLPQPD------SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGS--YPAF 150 (300)
T ss_dssp TTTEEEEECTT-SCEEEEECSSTT------CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTC--CEEE
T ss_pred CCCeEEEECCC-CCeEEecCCCCC------CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCC--Ccee
Confidence 23467788877 766544211000 01112333 57887776544589999998 6666665653221 2233
Q ss_pred EEE-ECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--CcEEEEECCCCeE
Q 018593 248 LLE-CDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRNGRLW 324 (353)
Q Consensus 248 l~~-~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~~~ 324 (353)
+.. .+|+|++....... |+.++. + .+... ..++.. ......+ .+..+|. +++... +.+..||+ ++++
T Consensus 151 i~~d~~g~l~v~~~~~~~--i~~~~~-~-g~~~~-~~~~~~--~~~~~~i-~~d~~g~-l~v~~~~~~~i~~~~~-~g~~ 220 (300)
T 2qc5_A 151 ITLGSDNALWFTENQNNS--IGRITN-T-GKLEE-YPLPTN--AAAPVGI-TSGNDGA-LWFVEIMGNKIGRITT-TGEI 220 (300)
T ss_dssp EEECTTSSEEEEETTTTE--EEEECT-T-CCEEE-EECSST--TCCEEEE-EECTTSS-EEEEETTTTEEEEECT-TCCE
T ss_pred EEECCCCCEEEEecCCCe--EEEECC-C-CcEEE-eeCCCC--CCCcceE-EECCCCC-EEEEccCCCEEEEEcC-CCcE
Confidence 444 35888776654444 444433 2 34433 222211 1122334 5566777 555543 34999999 5665
Q ss_pred EEe
Q 018593 325 KEM 327 (353)
Q Consensus 325 ~~v 327 (353)
...
T Consensus 221 ~~~ 223 (300)
T 2qc5_A 221 SEY 223 (300)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 64
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=90.74 E-value=13 Score=36.23 Aligned_cols=144 Identities=10% Similarity=0.143 Sum_probs=77.4
Q ss_pred eEEEEEcCCCcEEEeeecccccee-eeeec-CceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCC-CCCCCcee
Q 018593 173 KCLVFDSESNRWRKFVSVQDYYQF-SIMNR-NQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDK-VGSESRSY 247 (353)
Q Consensus 173 ~~~vy~s~~~~W~~~~~~~~~~~~-~~~~~-~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~-~~~~~~~~ 247 (353)
.+..|+..++.++........ +. ..... -.+++. +|.+.|++.....+..||..++++..+..... .....-..
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~-~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~ 456 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDE-SARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYA 456 (795)
T ss_dssp CEEEECTTTCCEEEECCC-------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEE
T ss_pred CeEEEcCCCCcEEEEecCCCC-cccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEE
Confidence 567788888877766211100 00 00000 013333 56657777654589999999999888743211 11102233
Q ss_pred EEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc-ccc-cCccceeeeeecCCcEEEEEeCCcEEEEECCCCeE
Q 018593 248 LLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL-RCI-KGMVPSIFPISQTREYVFLATHKQVLVYHRNGRLW 324 (353)
Q Consensus 248 l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~-~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~ 324 (353)
+.+. +|.|.+.+. .. ++.++ .++..|........ ... ...+..+ ..+.+|. +.+++.+.++.||++++++
T Consensus 457 i~~d~~g~lwigt~--~G--l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~i-~~d~~g~-lWigt~~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 457 ILPDGEGNLWLGTL--SA--LVRFN-PEQRSFTTIEKEKDGTPVVSKQITTL-FRDSHKR-LWIGGEEGLSVFKQEGLDI 529 (795)
T ss_dssp EEECSSSCEEEEES--SC--EEEEE-TTTTEEEECCBCTTCCBCCCCCEEEE-EECTTCC-EEEEESSCEEEEEEETTEE
T ss_pred EEECCCCCEEEEec--Cc--eeEEe-CCCCeEEEccccccccccCCceEEEE-EECCCCC-EEEEeCCceEEEeCCCCeE
Confidence 4443 588888764 23 34443 23355655432210 011 1122233 4556777 7778777899999999988
No 65
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=90.63 E-value=6.3 Score=32.47 Aligned_cols=194 Identities=11% Similarity=0.048 Sum_probs=99.5
Q ss_pred EeeecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCC
Q 018593 90 VRASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPD 169 (353)
Q Consensus 90 ~~~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 169 (353)
+....+|-+.+.. .....+.++||. ++...++.+... .... ++..|+.. +++... .
T Consensus 20 i~~d~~g~l~v~~-~~~~~v~~~d~~-~~~~~~~~~~~~-------~~~~---~i~~~~~g---~l~v~~---------~ 75 (299)
T 2z2n_A 20 ITVSDKGKVWITQ-HKANMISCINLD-GKITEYPLPTPD-------AKVM---CLTISSDG---EVWFTE---------N 75 (299)
T ss_dssp EEECTTSCEEEEE-TTTTEEEEECTT-CCEEEEECSSTT-------CCEE---EEEECTTS---CEEEEE---------T
T ss_pred eEECCCCCEEEEe-cCCCcEEEEcCC-CCeEEecCCccc-------Ccee---eEEECCCC---CEEEeC---------C
Confidence 3344567666664 345789999998 776655432111 1111 55565532 233321 1
Q ss_pred CcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCcee
Q 018593 170 GTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSY 247 (353)
Q Consensus 170 ~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~ 247 (353)
....+..|+.. +..+........ . ....+.. +|.+|+.......+..+|+ +.+...+..|.... ....
T Consensus 76 ~~~~i~~~~~~-g~~~~~~~~~~~--~----~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~--~~~~ 145 (299)
T 2z2n_A 76 AANKIGRITKK-GIIKEYTLPNPD--S----APYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGS--YPSF 145 (299)
T ss_dssp TTTEEEEECTT-SCEEEEECSSTT--C----CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTC--CEEE
T ss_pred CCCeEEEECCC-CcEEEEeCCCcC--C----CceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCC--CCce
Confidence 13356677765 555444211000 0 0112333 5777776654458999999 66666665553221 2234
Q ss_pred EEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe--CCcEEEEECCCCeE
Q 018593 248 LLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT--HKQVLVYHRNGRLW 324 (353)
Q Consensus 248 l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~yd~~~~~~ 324 (353)
+... +|+|++.......+ +.++. ..+.... .++.. ......+ .+..+|. +++.. .+.+..||+ ++++
T Consensus 146 i~~~~~g~l~v~~~~~~~i--~~~~~--~g~~~~~-~~~~~--~~~~~~i-~~~~~g~-l~v~~~~~~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 146 ITLGSDNALWFTENQNNAI--GRITE--SGDITEF-KIPTP--ASGPVGI-TKGNDDA-LWFVEIIGNKIGRITT-SGEI 215 (299)
T ss_dssp EEECTTSCEEEEETTTTEE--EEECT--TCCEEEE-ECSST--TCCEEEE-EECTTSS-EEEEETTTTEEEEECT-TCCE
T ss_pred EEEcCCCCEEEEeCCCCEE--EEEcC--CCcEEEe-eCCCC--CCcceeE-EECCCCC-EEEEccCCceEEEECC-CCcE
Confidence 4444 57888766444444 44433 2333332 12211 1112234 5666787 56655 345999999 7776
Q ss_pred EEe
Q 018593 325 KEM 327 (353)
Q Consensus 325 ~~v 327 (353)
+.+
T Consensus 216 ~~~ 218 (299)
T 2z2n_A 216 TEF 218 (299)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 66
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.56 E-value=6.9 Score=32.76 Aligned_cols=102 Identities=8% Similarity=0.012 Sum_probs=55.6
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
+|.+||.......|..||+.++....+..|... ..++.. +|+|++.. ...+.++ +.++.++..+.....
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~-----~~i~~~~dG~l~v~~--~~~l~~~---d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPV-----SSVALRQSGGYVATI--GTKFCAL---NWKEQSAVVLATVDN 93 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSSCE-----EEEEEBTTSSEEEEE--TTEEEEE---ETTTTEEEEEEECCT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCCce-----EEEEECCCCCEEEEE--CCeEEEE---ECCCCcEEEEEecCC
Confidence 478999987767999999999877766665432 233443 57765543 3344443 222244544443322
Q ss_pred ccccCccceeeeeecCCcEEEEEeC-------------CcEEEEECCC
Q 018593 287 RCIKGMVPSIFPISQTREYVFLATH-------------KQVLVYHRNG 321 (353)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~v~~~~~-------------~~~~~yd~~~ 321 (353)
.........+ .++.+|. +++.+. +.++.+|.+.
T Consensus 94 ~~~~~~~~di-~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 94 DKKNNRFNDG-KVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp TCSSEEEEEE-EECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCCCCCCCCE-EECCCCC-EEEecCCcccccccccCCCcEEEEEECCC
Confidence 1111112233 4566777 444331 1377777754
No 67
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=90.06 E-value=8.2 Score=32.88 Aligned_cols=105 Identities=10% Similarity=0.015 Sum_probs=58.4
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEE-EECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLL-ECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR 287 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~-~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~ 287 (353)
+.+||.......|..||+.+++...+..|... ..+. .-+|+++++. ... |+.++. ++.+...+...+..
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v-----~~i~~~~dg~l~v~~--~~g--l~~~d~-~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVHALPFMG-----SALAKISDSKQLIAS--DDG--LFLRDT-ATGVLTLHAELESD 130 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEEECSSCE-----EEEEEEETTEEEEEE--TTE--EEEEET-TTCCEEEEECSSTT
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEECCCcc-----eEEEEeCCCeEEEEE--CCC--EEEEEC-CCCcEEEEeeCCCC
Confidence 78999986656899999999887766665322 2333 3468887765 233 555532 22444443322111
Q ss_pred cccCccceeeeeecCCcEEEEEeC--------CcEEEEECCCCeEEEe
Q 018593 288 CIKGMVPSIFPISQTREYVFLATH--------KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~yd~~~~~~~~v 327 (353)
........+ .++.+|.+ ++.+. +.++.|| +++.+.+
T Consensus 131 ~~~~~~~~i-~~d~~G~l-~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 131 LPGNRSNDG-RMHPSGAL-WIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp CTTEEEEEE-EECTTSCE-EEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCCCCCCCE-EECCCCCE-EEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 101112233 55667774 44432 3488888 5666554
No 68
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=90.04 E-value=8 Score=32.70 Aligned_cols=112 Identities=13% Similarity=0.105 Sum_probs=60.6
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecC--CeEEEEEEecCCCCCeEEEEee
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISD--EWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~--~~~~vw~l~~~~~~~W~~~~~i 284 (353)
+|.+||.......|..||+.++++..+..+... .-..+... +|+|+++.... ..-.|+.++. ++..-... +
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~-~~~~~~~~--~ 128 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKA---NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE-NGDNLQDI--I 128 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECSSS---SEEEEEECTTSCEEEEECTTSSSCCEEEEECT-TSCSCEEE--E
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCC---CcceEEECCCCcEEEEeCCCCCCCceEEEEeC-CCCEEEEE--E
Confidence 578888876555899999999887765322111 22344443 58888776533 1123444432 22222211 1
Q ss_pred ccccccCccceeeeeecCCcEEEEEeC--------CcEEEEECCCCeEEEe
Q 018593 285 SLRCIKGMVPSIFPISQTREYVFLATH--------KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~yd~~~~~~~~v 327 (353)
...........+ .+..+|. +++... ..++.+|+++++.+.+
T Consensus 129 ~~~~~~~~~~~i-~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 129 EDLSTAYCIDDM-VFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CSSSSCCCEEEE-EECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred ccCccCCcccce-EECCCCC-EEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 111111112234 5566777 444433 3489999988777655
No 69
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=89.90 E-value=3.8 Score=34.53 Aligned_cols=108 Identities=10% Similarity=0.004 Sum_probs=59.5
Q ss_pred eEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEE-ECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecccc
Q 018593 210 ALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLE-CDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRC 288 (353)
Q Consensus 210 ~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~-~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~ 288 (353)
.+||.......|..+|.. +..+.+..|... ...+.. .+|+|++.......+.+| +.+ .+...+.......
T Consensus 58 ~l~~~d~~~~~i~~~~~~-g~~~~~~~~~~~----~~gl~~d~dG~l~v~~~~~~~v~~~---~~~-g~~~~~~~~~~~~ 128 (305)
T 3dr2_A 58 TLVWSDLVGRRVLGWRED-GTVDVLLDATAF----TNGNAVDAQQRLVHCEHGRRAITRS---DAD-GQAHLLVGRYAGK 128 (305)
T ss_dssp EEEEEETTTTEEEEEETT-SCEEEEEESCSC----EEEEEECTTSCEEEEETTTTEEEEE---CTT-SCEEEEECEETTE
T ss_pred EEEEEECCCCEEEEEeCC-CCEEEEeCCCCc----cceeeECCCCCEEEEECCCCEEEEE---CCC-CCEEEEEeccCCC
Confidence 489998776789999994 555555444322 223333 358887665444555554 222 3333332211111
Q ss_pred ccCccceeeeeecCCcEEEEE-----e--------------CCcEEEEECCCCeEEEee
Q 018593 289 IKGMVPSIFPISQTREYVFLA-----T--------------HKQVLVYHRNGRLWKEMY 328 (353)
Q Consensus 289 ~~~~~~~~~~~~~~~~~v~~~-----~--------------~~~~~~yd~~~~~~~~v~ 328 (353)
.......+ .+..+|. +++. + .+.++.||+++++++.+.
T Consensus 129 ~~~~~~~i-~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 129 RLNSPNDL-IVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp ECSCCCCE-EECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred ccCCCCCE-EECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 11112234 5667888 4442 1 134999999988887664
No 70
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.84 E-value=7.7 Score=32.26 Aligned_cols=193 Identities=10% Similarity=-0.007 Sum_probs=93.2
Q ss_pred cCeeEEeeecCCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 94 CNGLLCCSSIPEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 94 ~~Gll~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
+.|-+++.. .....++++|+.|++... ++..... ... .....+.. +++... ..
T Consensus 3 ~~~~~lv~~-~~~~~v~~~d~~tG~~~w~~~~~~~~--------~~~---~~~~~pdG---~ilvs~-----------~~ 56 (276)
T 3no2_A 3 SPQHLLVGG-SGWNKIAIINKDTKEIVWEYPLEKGW--------ECN---SVAATKAG---EILFSY-----------SK 56 (276)
T ss_dssp CCCEEEEEC-TTCSEEEEEETTTTEEEEEEECCTTC--------CCC---EEEECTTS---CEEEEC-----------BS
T ss_pred CCCcEEEee-CCCCEEEEEECCCCeEEEEeCCCccC--------CCc---CeEECCCC---CEEEeC-----------CC
Confidence 334444443 566789999998988554 3322100 001 12233322 233321 33
Q ss_pred eEEEEEcCCC--cEEEeeeccccceeeeeecCceEEEcceEEeeecC-CCEEEEEECCCceEEEeeCCCCCCCC--Ccee
Q 018593 173 KCLVFDSESN--RWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDS-CSFILALDLEGDVWRKISLPDKVGSE--SRSY 247 (353)
Q Consensus 173 ~~~vy~s~~~--~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~-~~~i~~~D~~~~~~~~~~~P~~~~~~--~~~~ 247 (353)
.+..||. ++ .|+.. ... ... .....+..+|.++..... ...++.+|+..+....+.+....... ....
T Consensus 57 ~V~~~d~-~G~~~W~~~---~~~-~~~--~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 57 GAKMITR-DGRELWNIA---APA-GCE--MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQ 129 (276)
T ss_dssp EEEEECT-TSCEEEEEE---CCT-TCE--EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSC
T ss_pred CEEEECC-CCCEEEEEc---CCC-Ccc--ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccC
Confidence 5778887 44 57665 211 000 011123346666665443 34788888866543333332211000 0111
Q ss_pred E-EEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC-cEEEEECCCCeEE
Q 018593 248 L-LECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK-QVLVYHRNGRLWK 325 (353)
Q Consensus 248 l-~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~yd~~~~~~~ 325 (353)
+ ...+|.+.++...+..+.+|.. .++..|.... +. . .... ....+|.+++....+ +++.+|++|++..
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~--~G~~~w~~~~--~~--~---~~~~-~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAP--NGQLLNSVKL--SG--T---PFSS-AFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECT--TSCEEEEEEC--SS--C---CCEE-EECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred ceECCCCCEEEEecCCCEEEEECC--CCCEEEEEEC--CC--C---ccce-eEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 1 2335776665555556555532 2335565432 11 0 1112 344577866655554 4999999987665
Q ss_pred Eeee
Q 018593 326 EMYS 329 (353)
Q Consensus 326 ~v~~ 329 (353)
+-..
T Consensus 200 w~~~ 203 (276)
T 3no2_A 200 RRVN 203 (276)
T ss_dssp EEEE
T ss_pred EEec
Confidence 5443
No 71
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=89.77 E-value=9.3 Score=33.06 Aligned_cols=190 Identities=13% Similarity=0.056 Sum_probs=99.7
Q ss_pred eEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEE
Q 018593 97 LLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLV 176 (353)
Q Consensus 97 ll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~v 176 (353)
.+++.. .....+.+||+.+++....-..... .. ++.+++.. . .+++.+ .....+.+
T Consensus 87 ~l~~~~-~~~~~v~v~d~~~~~~~~~~~~~~~---------~~---~~~~s~dg-~-~l~~~~---------~~~~~v~~ 142 (391)
T 1l0q_A 87 QVYVTN-MASSTLSVIDTTSNTVAGTVKTGKS---------PL---GLALSPDG-K-KLYVTN---------NGDKTVSV 142 (391)
T ss_dssp EEEEEE-TTTTEEEEEETTTTEEEEEEECSSS---------EE---EEEECTTS-S-EEEEEE---------TTTTEEEE
T ss_pred EEEEEE-CCCCEEEEEECCCCeEEEEEeCCCC---------cc---eEEECCCC-C-EEEEEe---------CCCCEEEE
Confidence 344443 4457899999999876554322111 11 45555432 2 333321 12457889
Q ss_pred EEcCCCcEEEeeeccccceeeeeecCceEEEcc-eEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CC
Q 018593 177 FDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNG-ALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DG 253 (353)
Q Consensus 177 y~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g-~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g 253 (353)
|+..+++....-..... +.... +.-+| .+|..+.....|..+|+.+.+.... .... ....+... +|
T Consensus 143 ~d~~~~~~~~~~~~~~~-~~~~~-----~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~g 211 (391)
T 1l0q_A 143 INTVTKAVINTVSVGRS-PKGIA-----VTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-----APSGIAVNPEG 211 (391)
T ss_dssp EETTTTEEEEEEECCSS-EEEEE-----ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-----EEEEEEECTTS
T ss_pred EECCCCcEEEEEecCCC-cceEE-----ECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-----CccceEECCCC
Confidence 99888765443111111 11111 11134 3555544445899999998765433 3221 11223333 35
Q ss_pred E-EEEEEe--cCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe--CCcEEEEECCCCeEEEee
Q 018593 254 C-LSVIEI--SDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT--HKQVLVYHRNGRLWKEMY 328 (353)
Q Consensus 254 ~-L~~v~~--~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~yd~~~~~~~~v~ 328 (353)
+ |++... ....+.+|.++. ...+..++... ....+ .+..++..+++.. ++.+.+||+++++.....
T Consensus 212 ~~l~~~~~~~~~~~v~~~d~~~-----~~~~~~~~~~~---~~~~~-~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 212 TKAYVTNVDKYFNTVSMIDTGT-----NKITARIPVGP---DPAGI-AVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp SEEEEEEECSSCCEEEEEETTT-----TEEEEEEECCS---SEEEE-EECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CEEEEEecCcCCCcEEEEECCC-----CeEEEEEecCC---CccEE-EEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 4 444443 467888885532 23444444321 11233 5566777665554 345999999998876654
Q ss_pred ee
Q 018593 329 SV 330 (353)
Q Consensus 329 ~~ 330 (353)
..
T Consensus 283 ~~ 284 (391)
T 1l0q_A 283 AV 284 (391)
T ss_dssp EC
T ss_pred EC
Confidence 43
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=89.71 E-value=8.6 Score=32.62 Aligned_cols=67 Identities=6% Similarity=0.018 Sum_probs=37.4
Q ss_pred CEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCC
Q 018593 253 GCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNG 321 (353)
Q Consensus 253 g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~ 321 (353)
|++.+++..+..+.+|.++... ..-.....+........+..+ .+..++..++..+. +.+.+||+.+
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVED-PHKAKCTTLTHHKCGAAIRQT-SFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSS-GGGCEEEEECCTTCCSCEEEE-EECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEecCCcEEEEECCCCC-CccccceEEcccccCCceEEE-EeCCCCCeEEEEeCCCEEEEEEecC
Confidence 6776666677899999875432 111223333322112333444 56668886666654 4599999864
No 73
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=89.52 E-value=8.9 Score=32.48 Aligned_cols=191 Identities=13% Similarity=0.068 Sum_probs=93.7
Q ss_pred CceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcE
Q 018593 106 MGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRW 184 (353)
Q Consensus 106 ~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W 184 (353)
...+.++|+.|++... ++....+ . ++.+++.. . +++... .....+.+||..+++-
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~----------~---~~~~s~dg-~-~l~v~~---------~~~~~v~~~d~~~~~~ 123 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKP----------F---GATINNTT-Q-TLWFGN---------TVNSAVTAIDAKTGEV 123 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCC----------C---SEEEETTT-T-EEEEEE---------TTTTEEEEEETTTCCE
T ss_pred CccEEEEcCCCCeEEEEEecCCCc----------c---eEEECCCC-C-EEEEEe---------cCCCEEEEEeCCCCee
Confidence 5689999999987554 3322111 1 34444432 2 233331 1234788999888754
Q ss_pred EEeeeccccc-eeeeee-cCceEEE--cce-EEeeec-CCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CCEEE
Q 018593 185 RKFVSVQDYY-QFSIMN-RNQVVFV--NGA-LHWLTD-SCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DGCLS 256 (353)
Q Consensus 185 ~~~~~~~~~~-~~~~~~-~~~~v~~--~g~-ly~~~~-~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g~L~ 256 (353)
...-...... +..... ....+.+ +|. +|.... ....|..+|+.+.+.... +..... ...+... +|+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~s~dg~~l 199 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM----STGLALDSEGKRL 199 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT----CCCCEEETTTTEE
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc----cceEEECCCCCEE
Confidence 2221111100 000000 0112223 444 665552 234799999998765433 322211 1122222 45544
Q ss_pred EEEecCCeEEEEEEecCCCCCeEEEEeecc--ccccCccceeeeeecCCcEEEEEeC--CcEEEEECCCCeEEEeeee
Q 018593 257 VIEISDEWMETWVLKDYYRDEWHSVDKVSL--RCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 257 ~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~--~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~~~~~v~~~ 330 (353)
++...+..+.+|.++ .......+.. .+.......+ .+..+++.+++... +.+..||+++++.......
T Consensus 200 ~~~~~~~~i~~~d~~-----~~~~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 200 YTTNADGELITIDTA-----DNKILSRKKLLDDGKEHFFINI-SLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp EEECTTSEEEEEETT-----TTEEEEEEECCCSSSCCCEEEE-EEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred EEEcCCCeEEEEECC-----CCeEEEEEEcCCCCCCcccceE-EECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 444445566666332 2233444443 1222223334 66777776666654 4599999999887665444
No 74
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=88.80 E-value=9.5 Score=31.88 Aligned_cols=181 Identities=10% Similarity=0.030 Sum_probs=90.8
Q ss_pred CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcE
Q 018593 105 EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRW 184 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W 184 (353)
....+.+||..+++.......... ..... .+.+.+.. . .++..+ ....+.+|+.+++.-
T Consensus 117 ~d~~i~~~d~~~~~~~~~~~~~~~------~~~i~---~~~~~~~~-~-~l~~~~----------~dg~v~~~d~~~~~~ 175 (337)
T 1gxr_A 117 EASTLSIWDLAAPTPRIKAELTSS------APACY---ALAISPDS-K-VCFSCC----------SDGNIAVWDLHNQTL 175 (337)
T ss_dssp SSSEEEEEECCCC--EEEEEEECS------SSCEE---EEEECTTS-S-EEEEEE----------TTSCEEEEETTTTEE
T ss_pred CCCcEEEEECCCCCcceeeecccC------CCceE---EEEECCCC-C-EEEEEe----------CCCcEEEEeCCCCce
Confidence 456889999888764332221111 11111 45554422 2 233221 134688899887654
Q ss_pred EEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CCEEEEEEe
Q 018593 185 RKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DGCLSVIEI 260 (353)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g~L~~v~~ 260 (353)
...-..... +.. .+.+ +|.....+.....+..||+.+.+-... ..+.. -..+... +|++.++..
T Consensus 176 ~~~~~~~~~-~i~------~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 176 VRQFQGHTD-GAS------CIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ-----IFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp EEEECCCSS-CEE------EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC-----EEEEEECTTSSEEEEEE
T ss_pred eeeeecccC-ceE------EEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCc-----eEEEEECCCCCEEEEEc
Confidence 322100000 000 1122 454444444445899999988764332 32221 1233332 466666666
Q ss_pred cCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 261 SDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 261 ~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
.+..+.+|.++.. . . ..+ ......+..+ .+..++..++.... +.+.+||+++++....
T Consensus 244 ~~~~i~~~~~~~~--~---~-~~~--~~~~~~v~~~-~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~ 302 (337)
T 1gxr_A 244 ESSNVEVLHVNKP--D---K-YQL--HLHESCVLSL-KFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ 302 (337)
T ss_dssp TTSCEEEEETTSS--C---E-EEE--CCCSSCEEEE-EECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCcEEEEECCCC--C---e-EEE--cCCccceeEE-EECCCCCEEEEecCCCcEEEEECCCCeEEEE
Confidence 7778999966432 1 1 111 1122223344 55667776665554 4499999999876643
No 75
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=88.38 E-value=10 Score=31.76 Aligned_cols=190 Identities=14% Similarity=0.131 Sum_probs=95.1
Q ss_pred EEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEE
Q 018593 98 LCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVF 177 (353)
Q Consensus 98 l~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy 177 (353)
+++.. .....++.+++ +++...+..+... .. ++.+|+.. ++++. ......+.+|
T Consensus 59 l~~~d-~~~~~i~~~~~-~g~~~~~~~~~~~---------~~---gl~~d~dG---~l~v~---------~~~~~~v~~~ 112 (305)
T 3dr2_A 59 LVWSD-LVGRRVLGWRE-DGTVDVLLDATAF---------TN---GNAVDAQQ---RLVHC---------EHGRRAITRS 112 (305)
T ss_dssp EEEEE-TTTTEEEEEET-TSCEEEEEESCSC---------EE---EEEECTTS---CEEEE---------ETTTTEEEEE
T ss_pred EEEEE-CCCCEEEEEeC-CCCEEEEeCCCCc---------cc---eeeECCCC---CEEEE---------ECCCCEEEEE
Confidence 44443 45567888888 5655444322211 11 56666643 23332 1123467778
Q ss_pred EcCCCcEEEeeeccccceeeeeecCc-eEEEcceEEeee----c-------------CCCEEEEEECCCceEEEeeCCCC
Q 018593 178 DSESNRWRKFVSVQDYYQFSIMNRNQ-VVFVNGALHWLT----D-------------SCSFILALDLEGDVWRKISLPDK 239 (353)
Q Consensus 178 ~s~~~~W~~~~~~~~~~~~~~~~~~~-~v~~~g~ly~~~----~-------------~~~~i~~~D~~~~~~~~~~~P~~ 239 (353)
+.. ++.+........ ........ .+.-+|.+|+.. . ....|..||+.++++..+. ...
T Consensus 113 ~~~-g~~~~~~~~~~~--~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~ 188 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAG--KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD 188 (305)
T ss_dssp CTT-SCEEEEECEETT--EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES
T ss_pred CCC-CCEEEEEeccCC--CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC
Confidence 875 666554211110 00011111 222267887731 1 0137999999888776654 111
Q ss_pred CCCCCceeEEEE-CCE-EEEEEec-----CCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC
Q 018593 240 VGSESRSYLLEC-DGC-LSVIEIS-----DEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK 312 (353)
Q Consensus 240 ~~~~~~~~l~~~-~g~-L~~v~~~-----~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 312 (353)
....+... +|+ |+++... ...+.++.++. ........+. .........+ .++.+|. +++.+.+
T Consensus 189 ----~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~---~~l~~~~~~~-~~~~~~pdgi-~~d~~G~-lwv~~~~ 258 (305)
T 3dr2_A 189 ----HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD---GALHDRRHFA-SVPDGLPDGF-CVDRGGW-LWSSSGT 258 (305)
T ss_dssp ----SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET---TEEEEEEEEE-CCSSSCCCSE-EECTTSC-EEECCSS
T ss_pred ----CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC---CCccCCeEEE-ECCCCCCCeE-EECCCCC-EEEecCC
Confidence 12233443 455 6655443 24555554433 2221111111 1111223345 6777888 7777777
Q ss_pred cEEEEECCCCeEEEe
Q 018593 313 QVLVYHRNGRLWKEM 327 (353)
Q Consensus 313 ~~~~yd~~~~~~~~v 327 (353)
.|.+||++++....+
T Consensus 259 gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 259 GVCVFDSDGQLLGHI 273 (305)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred cEEEECCCCCEEEEE
Confidence 799999988777666
No 76
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=88.35 E-value=12 Score=32.46 Aligned_cols=81 Identities=20% Similarity=0.210 Sum_probs=51.0
Q ss_pred CEEEEEEe-cC-------CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCcEEEEECCCCeE
Q 018593 253 GCLSVIEI-SD-------EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGRLW 324 (353)
Q Consensus 253 g~L~~v~~-~~-------~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~ 324 (353)
++|+++.. .. ..-.||+++- .....+.+++... ...+ .+..+|+.++....+.+.+||.++++.
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~---~t~~~v~~i~~~~----p~~i-a~spdg~~l~v~n~~~v~v~D~~t~~l 337 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDT---KTKQRVARIPGRD----ALSM-TIDQQRNLMLTLDGGNVNVYDISQPEP 337 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEET---TTTEEEEEEECTT----CCEE-EEETTTTEEEEECSSCEEEEECSSSSC
T ss_pred CeEEEEEccCCCcccccCCCceEEEEEC---CCCcEEEEEecCC----eeEE-EECCCCCEEEEeCCCeEEEEECCCCcc
Confidence 67777654 11 1234555532 3345777777643 3455 677888878877666799999999966
Q ss_pred EEeeeeccCccccceEE
Q 018593 325 KEMYSVKYGSTLPLWFS 341 (353)
Q Consensus 325 ~~v~~~~~~~~~~~~~~ 341 (353)
+.+..+..-+..|..+.
T Consensus 338 ~~~~~i~~~G~~P~~~~ 354 (361)
T 2oiz_A 338 KLLRTIEGAAEASLQVQ 354 (361)
T ss_dssp EEEEEETTSCSSEEEEE
T ss_pred eeeEEeccCCCCcEEEE
Confidence 66666544445555543
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.32 E-value=25 Score=36.09 Aligned_cols=198 Identities=15% Similarity=0.081 Sum_probs=100.3
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
+.+|-.++.. ...+.+.|||..|++... +.... .... .+.+++.. . .++..+ ..
T Consensus 624 s~~~~~l~s~-~~d~~i~vw~~~~~~~~~~~~~h~---------~~v~---~~~~s~~~-~-~l~s~~----------~d 678 (1249)
T 3sfz_A 624 SQDGQRIASC-GADKTLQVFKAETGEKLLDIKAHE---------DEVL---CCAFSSDD-S-YIATCS----------AD 678 (1249)
T ss_dssp CTTSSEEEEE-ETTSCEEEEETTTCCEEEEECCCS---------SCEE---EEEECTTS-S-EEEEEE----------TT
T ss_pred CCCCCEEEEE-eCCCeEEEEECCCCCEEEEeccCC---------CCEE---EEEEecCC-C-EEEEEe----------CC
Confidence 3455544443 355689999999987544 32111 1122 45555532 2 233221 14
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC 251 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~ 251 (353)
..+.+++..++.-...-......-........ -++.+...+..+..|..+|+.+......-. .... .-..+...
T Consensus 679 ~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-~h~~--~v~~~~~s 752 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYDEHSEQVNCCHFTNK---SNHLLLATGSNDFFLKLWDLNQKECRNTMF-GHTN--SVNHCRFS 752 (1249)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSS---SSCCEEEEEETTSCEEEEETTSSSEEEEEC-CCSS--CEEEEEEC
T ss_pred CeEEEEECCCCceEEEEcCCCCcEEEEEEecC---CCceEEEEEeCCCeEEEEECCCcchhheec-CCCC--CEEEEEEe
Confidence 47889998887543221000000011111110 022233333333578899998876443311 1110 11222332
Q ss_pred -CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc-----------cccCccceeeeeecCCcEEEEEeCCcEEEEEC
Q 018593 252 -DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR-----------CIKGMVPSIFPISQTREYVFLATHKQVLVYHR 319 (353)
Q Consensus 252 -~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~ 319 (353)
+|++.+.+..+..+.+|.+.... ....+... ........+ .+..+|..++....+.+..||.
T Consensus 753 p~~~~l~s~s~dg~v~vwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~dg~~l~~~~~~~v~~~d~ 826 (1249)
T 3sfz_A 753 PDDELLASCSADGTLRLWDVRSAN-----ERKSINVKRFFLSSEDPPEDVEVIVKCC-SWSADGDKIIVAAKNKVLLFDI 826 (1249)
T ss_dssp SSTTEEEEEESSSEEEEEEGGGTE-----EEEEEECCCCC--------CCCCCBCCC-CBCTTSSEEEEEETTEEEEEET
T ss_pred cCCCEEEEEECCCeEEEEeCCCCc-----ccceecccccccccCCccccccceEEEE-EECCCCCEEEEEcCCcEEEEEe
Confidence 46666666677889999775421 22222210 111223334 5667888788888888999999
Q ss_pred CCCeEEEe
Q 018593 320 NGRLWKEM 327 (353)
Q Consensus 320 ~~~~~~~v 327 (353)
.++.....
T Consensus 827 ~~~~~~~~ 834 (1249)
T 3sfz_A 827 HTSGLLAE 834 (1249)
T ss_dssp TTCCEEEE
T ss_pred cCCCceeE
Confidence 98876554
No 78
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=88.24 E-value=12 Score=32.25 Aligned_cols=195 Identities=10% Similarity=-0.074 Sum_probs=91.5
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
++.++.. ...+.+.|||..+++.......... .+..... .+.+.+.. . .++..+ ....+
T Consensus 93 d~~l~~~--s~dg~v~lWd~~~~~~~~~~~~~~~----~H~~~V~---~v~~spdg-~-~l~sgs----------~d~~i 151 (344)
T 4gqb_B 93 ERGILVA--SDSGAVELWELDENETLIVSKFCKY----EHDDIVS---TVSVLSSG-T-QAVSGS----------KDICI 151 (344)
T ss_dssp TTEEEEE--ETTSEEEEEEECTTSSCEEEEEEEE----CCSSCEE---EEEECTTS-S-EEEEEE----------TTSCE
T ss_pred CCeEEEE--ECCCEEEEEeccCCCceeEeecccc----CCCCCEE---EEEECCCC-C-EEEEEe----------CCCeE
Confidence 4555444 3567899999998875543322111 1111222 45555432 2 233321 13467
Q ss_pred EEEEcCCCcEEEeeeccccceeeeeecCceEEE--cc-eEEeeecCCCEEEEEECCCceEE-EeeCCCCCCCCCceeEEE
Q 018593 175 LVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NG-ALHWLTDSCSFILALDLEGDVWR-KISLPDKVGSESRSYLLE 250 (353)
Q Consensus 175 ~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g-~ly~~~~~~~~i~~~D~~~~~~~-~~~~P~~~~~~~~~~l~~ 250 (353)
.++|..++.=... ...- ...-..+.+ +| .+...+..+..|..+|+.+.+-. .+..+.... ....+..
T Consensus 152 ~iwd~~~~~~~~~--~~~h-----~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~ 222 (344)
T 4gqb_B 152 KVWDLAQQVVLSS--YRAH-----AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY--LPTSLAW 222 (344)
T ss_dssp EEEETTTTEEEEE--ECCC-----SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CC--CEEEEEE
T ss_pred EEEECCCCcEEEE--EcCc-----CCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeec--cceeeee
Confidence 8888877632111 0100 000001221 23 23333333357888999876533 222222110 1122333
Q ss_pred E--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCC-cEEEEEe-CCcEEEEECCCCeEEE
Q 018593 251 C--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTR-EYVFLAT-HKQVLVYHRNGRLWKE 326 (353)
Q Consensus 251 ~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~-~~v~~~~-~~~~~~yd~~~~~~~~ 326 (353)
. ++++.+.+..+..+.+|.+... ..+..+. +....+..+ .+..++ .++.... ++.+.+||.++++...
T Consensus 223 ~p~~~~~l~sg~~dg~v~~wd~~~~-----~~~~~~~--~h~~~v~~v-~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 223 HPQQSEVFVFGDENGTVSLVDTKST-----SCVLSSA--VHSQCVTGL-VFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp CSSCTTEEEEEETTSEEEEEESCC-------CCEEEE--CCSSCEEEE-EECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred cCCCCcceEEeccCCcEEEEECCCC-----cEEEEEc--CCCCCEEEE-EEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 2 3566665567788999965331 1222222 222223334 455555 4344444 3559999999987654
Q ss_pred e
Q 018593 327 M 327 (353)
Q Consensus 327 v 327 (353)
.
T Consensus 295 ~ 295 (344)
T 4gqb_B 295 S 295 (344)
T ss_dssp E
T ss_pred E
Confidence 4
No 79
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=87.87 E-value=12 Score=31.74 Aligned_cols=206 Identities=12% Similarity=0.022 Sum_probs=101.7
Q ss_pred CeeEEeeecCCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcce
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFK 173 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (353)
++.+++.. .....+.++|+.+++... ++....... .. .......++.+++..+ +++... ......
T Consensus 100 g~~l~v~~-~~~~~v~~~d~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~s~dg~--~l~~~~--------~~~~~~ 165 (353)
T 3vgz_A 100 TQTLWFGN-TVNSAVTAIDAKTGEVKGRLVLDDRKRT--EE-VRPLQPRELVADDATN--TVYISG--------IGKESV 165 (353)
T ss_dssp TTEEEEEE-TTTTEEEEEETTTCCEEEEEESCCCCCC--SS-CCCCEEEEEEEETTTT--EEEEEE--------ESSSCE
T ss_pred CCEEEEEe-cCCCEEEEEeCCCCeeEEEEecCCCccc--cc-cCCCCCceEEECCCCC--EEEEEe--------cCCCce
Confidence 34455553 445789999999988643 333211100 00 0001111566666433 233321 012456
Q ss_pred EEEEEcCCCcEEEeeeccccceeeeeecCceEEEcce-EEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE
Q 018593 174 CLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGA-LHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC 251 (353)
Q Consensus 174 ~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~-ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~ 251 (353)
+.+||.++++=... .+.. ......-.+.-+|. +|..... ..+..+|+.+.+.... ..+..........+...
T Consensus 166 i~~~d~~~~~~~~~--~~~~---~~~~~~~~~s~dg~~l~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 239 (353)
T 3vgz_A 166 IWVVDGGNIKLKTA--IQNT---GKMSTGLALDSEGKRLYTTNAD-GELITIDTADNKILSRKKLLDDGKEHFFINISLD 239 (353)
T ss_dssp EEEEETTTTEEEEE--ECCC---CTTCCCCEEETTTTEEEEECTT-SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE
T ss_pred EEEEcCCCCceEEE--ecCC---CCccceEEECCCCCEEEEEcCC-CeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC
Confidence 88899877643222 0100 00001112222454 5555444 5899999998775433 44322111012224444
Q ss_pred -CC-EEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--CcEEEEECCCCeEEEe
Q 018593 252 -DG-CLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 252 -~g-~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~~~~~v 327 (353)
+| .|++.......+.+|.++. .+ .+..++.... ..+ .+..+|+.+++... +.+.+||+++++....
T Consensus 240 ~dg~~l~~~~~~~~~v~~~d~~~---~~--~~~~~~~~~~----~~~-~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 240 TARQRAFITDSKAAEVLVVDTRN---GN--ILAKVAAPES----LAV-LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp TTTTEEEEEESSSSEEEEEETTT---CC--EEEEEECSSC----CCE-EEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCC---Cc--EEEEEEcCCC----ceE-EECCCCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence 35 4655544567777774422 33 3333443211 224 56667775666653 4599999999887655
Q ss_pred eee
Q 018593 328 YSV 330 (353)
Q Consensus 328 ~~~ 330 (353)
...
T Consensus 310 ~~~ 312 (353)
T 3vgz_A 310 FDT 312 (353)
T ss_dssp EEC
T ss_pred Eec
Confidence 443
No 80
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=87.29 E-value=15 Score=32.47 Aligned_cols=187 Identities=10% Similarity=0.068 Sum_probs=94.8
Q ss_pred ceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEE
Q 018593 107 GVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRK 186 (353)
Q Consensus 107 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~ 186 (353)
..+++||..+++...+...+.. .. .+.+.+. +-+++... . .++...+.+++..++..+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~---------~~---~~~~spd--g~~la~~~-----~--~~g~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRH---------NG---APAFSPD--GSKLAFAL-----S--KTGSLNLYVMDLASGQIRQ 261 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSC---------EE---EEEECTT--SSEEEEEE-----C--TTSSCEEEEEETTTCCEEE
T ss_pred cEEEEEECCCCcEEEeecCCCc---------cc---CEEEcCC--CCEEEEEE-----e--cCCCceEEEEECCCCCEEe
Confidence 5899999999987766433211 11 4555543 22344332 1 2335678899998887665
Q ss_pred eeeccccceeeeeecCceEEEcce-EEeeecCC--CEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEe-c
Q 018593 187 FVSVQDYYQFSIMNRNQVVFVNGA-LHWLTDSC--SFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEI-S 261 (353)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~v~~~g~-ly~~~~~~--~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~-~ 261 (353)
....... ....... -+|. |++.+... ..|..+|+.+.....+..... ....+..+ +|+..++.. .
T Consensus 262 l~~~~~~-~~~~~~s-----pdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 262 VTDGRSN-NTEPTWF-----PDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGS----QNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp CCCCSSC-EEEEEEC-----TTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSS----EEEEEEECTTSSEEEEEEEC
T ss_pred CcCCCCc-ccceEEC-----CCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCC----cccCeEECCCCCEEEEEECc
Confidence 5221111 1111111 1344 55554322 368888988876444322111 12223333 465444443 4
Q ss_pred CCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe-CC---cEEEEECCCCeEEEeeeecc
Q 018593 262 DEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT-HK---QVLVYHRNGRLWKEMYSVKY 332 (353)
Q Consensus 262 ~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~~---~~~~yd~~~~~~~~v~~~~~ 332 (353)
.....|+.++- ++.+... +.... ..... .+..+|..++... .+ .++.+|++++..+.+..-.+
T Consensus 332 ~g~~~i~~~d~-~~~~~~~---l~~~~---~~~~~-~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~ 398 (415)
T 2hqs_A 332 GGQQHIAKQDL-ATGGVQV---LSSTF---LDETP-SLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDG 398 (415)
T ss_dssp SSCEEEEEEET-TTCCEEE---CCCSS---SCEEE-EECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSS
T ss_pred CCceEEEEEEC-CCCCEEE---ecCCC---CcCCe-EEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCC
Confidence 33344444432 2233322 22111 22333 5566777555544 33 49999999998888854433
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=86.92 E-value=8.5 Score=32.85 Aligned_cols=108 Identities=11% Similarity=0.130 Sum_probs=61.9
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
+|.+...+.....|..||..++++..+ .++.... .-..+... +|++.+.+..+..+.+|.++. .++.....+.
T Consensus 19 ~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~~ 93 (372)
T 1k8k_C 19 DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG--QVTGVDWAPDSNRIVTCGTDRNAYVWTLKG---RTWKPTLVIL 93 (372)
T ss_dssp TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSS--CEEEEEEETTTTEEEEEETTSCEEEEEEET---TEEEEEEECC
T ss_pred CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCC--cccEEEEeCCCCEEEEEcCCCeEEEEECCC---CeeeeeEEee
Confidence 344444453345899999999876555 3332221 12233333 467666666778899998854 4444443322
Q ss_pred cccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCe
Q 018593 286 LRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
.....+..+ .+..++..++.... +.+.+||+++++
T Consensus 94 --~~~~~v~~~-~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 94 --RINRAARCV-RWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp --CCSSCEEEE-EECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred --cCCCceeEE-EECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 122223334 45567776666654 448888888765
No 82
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=86.61 E-value=14 Score=31.42 Aligned_cols=107 Identities=9% Similarity=0.038 Sum_probs=59.1
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
++.+.--+.. ..|..+|+.+++.... +..... .-..+... +|++.+.+..+..+.+|.+.. .. ....+.
T Consensus 154 ~~~l~s~s~d-~~i~~wd~~~~~~~~~-~~~h~~--~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~---~~--~~~~~~- 223 (340)
T 1got_B 154 DNQIVTSSGD-TTCALWDIETGQQTTT-FTGHTG--DVMSLSLAPDTRLFVSGACDASAKLWDVRE---GM--CRQTFT- 223 (340)
T ss_dssp TTEEEEEETT-SCEEEEETTTTEEEEE-ECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTT---CS--EEEEEC-
T ss_pred CCcEEEEECC-CcEEEEECCCCcEEEE-EcCCCC--ceEEEEECCCCCEEEEEeCCCcEEEEECCC---Ce--eEEEEc-
Confidence 4554433333 4899999988764332 221111 12233333 467666666788999996633 21 222222
Q ss_pred ccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEE
Q 018593 287 RCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKE 326 (353)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~ 326 (353)
+....+..+ .+..++..++.... +.+.+||+++++-..
T Consensus 224 -~h~~~v~~v-~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 262 (340)
T 1got_B 224 -GHESDINAI-CFFPNGNAFATGSDDATCRLFDLRADQELM 262 (340)
T ss_dssp -CCSSCEEEE-EECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred -CCcCCEEEE-EEcCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 222223344 56667776666554 459999999876443
No 83
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=86.55 E-value=14 Score=31.47 Aligned_cols=150 Identities=13% Similarity=0.112 Sum_probs=79.9
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCcee
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSY 247 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~ 247 (353)
...+.+|+..++.|......... ....-..+.+ +|.....+..+..+..+|..++.+..+ .+..... .-..
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~~----h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~--~v~~ 110 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSEG----HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHEN--EVKS 110 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECSS----CSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSS--CEEE
T ss_pred CCeEEEEEcCCCcceeeeeeccc----cCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCC--CceE
Confidence 45678888888877543111000 0000001111 344444444335788888888776554 3333221 1122
Q ss_pred EEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEE
Q 018593 248 LLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWK 325 (353)
Q Consensus 248 l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~ 325 (353)
+... +|++.+.+..+..+.+|.++.. ..+..+..+.. ....+..+ .+..++.+++.... +.+.+||.+++++.
T Consensus 111 v~~sp~~~~l~s~s~D~~v~iwd~~~~--~~~~~~~~~~~--h~~~v~~~-~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 111 VAWAPSGNLLATCSRDKSVWVWEVDEE--DEYECVSVLNS--HTQDVKHV-VWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECTT--SCEEEEEEECC--CCSCEEEE-EECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred EEEeCCCCEEEEEECCCeEEEEECCCC--CCeEEEEEecC--cCCCeEEE-EECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 3333 4676666667789999988553 33444333332 12222333 45566775665554 44999999999887
Q ss_pred Eeeeec
Q 018593 326 EMYSVK 331 (353)
Q Consensus 326 ~v~~~~ 331 (353)
.+..++
T Consensus 186 ~~~~~~ 191 (345)
T 3fm0_A 186 CCATLE 191 (345)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 665554
No 84
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=86.09 E-value=7.7 Score=32.76 Aligned_cols=107 Identities=15% Similarity=0.114 Sum_probs=59.6
Q ss_pred cceEEeeecCCCEEEEEECCCceEE-EeeCCCCCCCCCceeEEEE-CCE-EEEEEecCCeEEEEEEecCCCCCeEEEEee
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWR-KISLPDKVGSESRSYLLEC-DGC-LSVIEISDEWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~-~~~~P~~~~~~~~~~l~~~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i 284 (353)
++.+|........|..+|+.+.+.. .++.+... ....+... +|+ +++.......+.+|.++. .+ .+..+
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t---~~--~~~~~ 81 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF---GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT---CK--NTFHA 81 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCC---SSCEEEECTTSSEEEEEETTTTEEEEEETTT---TE--EEEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCC---CCceeEECCCCCEEEEEeCCCCcEEEEeCCC---Cc--EEEEE
Confidence 5666666655568999999987754 33665421 11233333 465 444443566777774422 22 23333
Q ss_pred ccccc----cCccceeeeeecCCcEEEEEe-------------CCcEEEEECCCCe
Q 018593 285 SLRCI----KGMVPSIFPISQTREYVFLAT-------------HKQVLVYHRNGRL 323 (353)
Q Consensus 285 ~~~~~----~~~~~~~~~~~~~~~~v~~~~-------------~~~~~~yd~~~~~ 323 (353)
..... ......+ .+..+|+.+++.. .+.+..||+++++
T Consensus 82 ~~~~~~~~~~~~~~~~-~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSF-AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp ESCCSTTEEEECSSCE-EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred Ecccccccccccccce-EECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 33110 1112334 5667787677665 2569999998854
No 85
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=85.78 E-value=16 Score=31.14 Aligned_cols=120 Identities=9% Similarity=0.072 Sum_probs=65.6
Q ss_pred cceEEeeecCCCEEEEEECCCc--eEEEe-eCCCCCCCCCceeEEEE-C---CEEEEEEecCCeEEEEEEecCCCCCeEE
Q 018593 208 NGALHWLTDSCSFILALDLEGD--VWRKI-SLPDKVGSESRSYLLEC-D---GCLSVIEISDEWMETWVLKDYYRDEWHS 280 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~--~~~~~-~~P~~~~~~~~~~l~~~-~---g~L~~v~~~~~~~~vw~l~~~~~~~W~~ 280 (353)
+|.+...+..+..|..||+.+. .+..+ .+..... .-..+... + |++.+.+..+..+.+|.+.... ..+..
T Consensus 171 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~ 247 (379)
T 3jrp_A 171 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ-GPWKK 247 (379)
T ss_dssp TTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT-SCCEE
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC--cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC-cccee
Confidence 3555555544457888988654 34444 3333221 12233333 2 5666666677889999885532 23332
Q ss_pred EEeeccccccCccceeeeeecCCcEEEEEe-CCcEEEEECC-CCeEEEeeeecc
Q 018593 281 VDKVSLRCIKGMVPSIFPISQTREYVFLAT-HKQVLVYHRN-GRLWKEMYSVKY 332 (353)
Q Consensus 281 ~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd~~-~~~~~~v~~~~~ 332 (353)
. .+........+..+ .+..++..++... ++.+.+||++ .++|+.+..+..
T Consensus 248 ~-~~~~~~~~~~v~~~-~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 248 T-LLKEEKFPDVLWRA-SWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp E-ESSSSCCSSCEEEE-EECSSSCCEEEEESSSSEEEEEEEETTEEEEEEEEC-
T ss_pred e-eeccccCCCcEEEE-EEcCCCCEEEEecCCCcEEEEeCCCCCccccccceec
Confidence 2 12212222223334 5566777566554 4559999998 568888766553
No 86
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=85.53 E-value=13 Score=30.06 Aligned_cols=187 Identities=13% Similarity=0.100 Sum_probs=95.1
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
..+|.+++.. . ...++++|+.++....++..... ... ++.+++.. +++... ....
T Consensus 75 ~~~g~l~v~~-~-~~~i~~~d~~~~~~~~~~~~~~~--------~p~---~i~~~~~g---~l~v~~---------~~~~ 129 (270)
T 1rwi_B 75 DGAGTVYVTD-F-NNRVVTLAAGSNNQTVLPFDGLN--------YPE---GLAVDTQG---AVYVAD---------RGNN 129 (270)
T ss_dssp CTTCCEEEEE-T-TTEEEEECTTCSCCEECCCCSCS--------SEE---EEEECTTC---CEEEEE---------GGGT
T ss_pred CCCCCEEEEc-C-CCEEEEEeCCCceEeeeecCCcC--------CCc---ceEECCCC---CEEEEE---------CCCC
Confidence 3466666664 2 67899999988766555432111 111 56666633 244331 1134
Q ss_pred eEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEE
Q 018593 173 KCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLE 250 (353)
Q Consensus 173 ~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~ 250 (353)
.+.+|+.++...... ... . .....++.+ +|.+|+.......|..||+.+............ ....+..
T Consensus 130 ~i~~~~~~~~~~~~~---~~~---~-~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~---~p~~i~~ 199 (270)
T 1rwi_B 130 RVVKLAAGSKTQTVL---PFT---G-LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDIT---APWGIAV 199 (270)
T ss_dssp EEEEECTTCCSCEEC---CCC---S-CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCC---SEEEEEE
T ss_pred EEEEEECCCceeEee---ccc---c-CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCC---CceEEEE
Confidence 677777665544332 110 0 011123333 578887765445899999988765443222111 2234444
Q ss_pred E-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe--CCcEEEEECCCCe
Q 018593 251 C-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT--HKQVLVYHRNGRL 323 (353)
Q Consensus 251 ~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~yd~~~~~ 323 (353)
. +|.|++.......+.+|.. .+..... ....+. .....+ .+..+|. +++.. .+.+..|++..++
T Consensus 200 d~~g~l~v~~~~~~~v~~~~~--~~~~~~~----~~~~~~-~~p~~i-~~~~~g~-l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 200 DEAGTVYVTEHNTNQVVKLLA--GSTTSTV----LPFTGL-NTPLAV-AVDSDRT-VYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CTTCCEEEEETTTSCEEEECT--TCSCCEE----CCCCSC-SCEEEE-EECTTCC-EEEEEGGGTEEEEECCCGGG
T ss_pred CCCCCEEEEECCCCcEEEEcC--CCCccee----eccCCC-CCceeE-EECCCCC-EEEEECCCCEEEEEcCCCcc
Confidence 3 4788887665556655522 1112211 121111 112334 5566777 55543 3448888877654
No 87
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=85.24 E-value=16 Score=30.82 Aligned_cols=114 Identities=5% Similarity=-0.025 Sum_probs=62.0
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCC----------------CCCceeEEEE--CCEEEEEEecCCeEEEEE
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVG----------------SESRSYLLEC--DGCLSVIEISDEWMETWV 269 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~----------------~~~~~~l~~~--~g~L~~v~~~~~~~~vw~ 269 (353)
+|.++|++.....|..||+.+..++.+..+.... ......++.. +|+|+++.... . ++.
T Consensus 29 ~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~-~--i~~ 105 (322)
T 2fp8_A 29 TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYY-H--LSV 105 (322)
T ss_dssp TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTT-E--EEE
T ss_pred CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCC-C--EEE
Confidence 5777777765568999999988777664332110 0012334454 58888876532 2 455
Q ss_pred EecCCCCCeEEEEeeccccccCccceeeeeec-CCcEEEEEeC-------------------CcEEEEECCCCeEEEe
Q 018593 270 LKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQ-TREYVFLATH-------------------KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 270 l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~-------------------~~~~~yd~~~~~~~~v 327 (353)
++. +......+..............+ .++. +|. +++... +.++.||+++++.+.+
T Consensus 106 ~d~-~~g~~~~~~~~~~~~~~~~p~~i-~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 106 VGS-EGGHATQLATSVDGVPFKWLYAV-TVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp ECT-TCEECEEEESEETTEECSCEEEE-EECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred EeC-CCCEEEEecccCCCCcccccceE-EEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 532 22222222211111111112234 5666 787 455432 3499999999887765
No 88
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=85.01 E-value=16 Score=30.66 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=59.4
Q ss_pred eeecCCCEEEEEECCC-ceEEEe-eCCCCCCCCCceeEEEE--CC----EEEEEEecCCeEEEEEEecCCCCCeEEEEee
Q 018593 213 WLTDSCSFILALDLEG-DVWRKI-SLPDKVGSESRSYLLEC--DG----CLSVIEISDEWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 213 ~~~~~~~~i~~~D~~~-~~~~~~-~~P~~~~~~~~~~l~~~--~g----~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i 284 (353)
..+..+..|..+|..+ +.|..+ .+..+. ....-+.. ++ .+.+.+..+..+.+|.++......|.... +
T Consensus 183 ~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~---~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~-~ 258 (316)
T 3bg1_A 183 ASGGCDNLIKLWKEEEDGQWKEEQKLEAHS---DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKL-L 258 (316)
T ss_dssp ECCBTTSBCCEEEECTTSCEEEEECCBCCS---SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCE-E
T ss_pred EEecCCCeEEEEEeCCCCccceeeecccCC---CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhh-h
Confidence 3333335777888864 345544 333222 12222222 22 45554557889999988653223343211 1
Q ss_pred ccccccCccceeeeeecCCcEEEEEeC-CcEEEEECC-CCeEEEeeeecc
Q 018593 285 SLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRN-GRLWKEMYSVKY 332 (353)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~-~~~~~~v~~~~~ 332 (353)
..+...+..+ .+..++..+..... +.+.+||.. .++|+.+..+++
T Consensus 259 --~~~~~~v~~v-~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 259 --HKFNDVVWHV-SWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp --EECSSCEEEE-EECTTTCCEEEEESSSCEEEEEECTTSCEEEEEECC-
T ss_pred --hcCCCcEEEE-EEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeeeccC
Confidence 1112222334 45567775655544 458899976 568998877764
No 89
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=85.00 E-value=29 Score=33.61 Aligned_cols=112 Identities=14% Similarity=0.113 Sum_probs=66.1
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
+|.| |++.....+..||..++++..+..+. .....-..+.+. +|.|++.+. .. ++.++. ++.+|........
T Consensus 417 ~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~-~~~~~v~~i~~d~~g~lwigt~--~G--l~~~~~-~~~~~~~~~~~~~ 489 (781)
T 3v9f_A 417 EGNL-WFGTYLGNISYYNTRLKKFQIIELEK-NELLDVRVFYEDKNKKIWIGTH--AG--VFVIDL-ASKKVIHHYDTSN 489 (781)
T ss_dssp TSCE-EEEETTEEEEEECSSSCEEEECCSTT-TCCCCEEEEEECTTSEEEEEET--TE--EEEEES-SSSSCCEEECTTT
T ss_pred CCCE-EEEeccCCEEEEcCCCCcEEEeccCC-CCCCeEEEEEECCCCCEEEEEC--Cc--eEEEeC-CCCeEEecccCcc
Confidence 3554 55554348999999999998875431 111023344444 588887654 33 444432 3355665543321
Q ss_pred c-cccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEee
Q 018593 287 R-CIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEMY 328 (353)
Q Consensus 287 ~-~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v~ 328 (353)
. .....+..+ ..+.+|. +.+++. +.++.||+++++++...
T Consensus 490 ~~~~~~~i~~i-~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 490 SQLLENFVRSI-AQDSEGR-FWIGTFGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp SSCSCSCEEEE-EECTTCC-EEEEESSSCEEEECTTCCEEEEEC
T ss_pred cccccceeEEE-EEcCCCC-EEEEEcCCCEEEEeCCCCeEEEcc
Confidence 1 112223334 4566777 778876 67999999999988764
No 90
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=84.70 E-value=14 Score=29.80 Aligned_cols=191 Identities=14% Similarity=0.071 Sum_probs=92.5
Q ss_pred eeecCeeEEe-eecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCC
Q 018593 91 RASCNGLLCC-SSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPD 169 (353)
Q Consensus 91 ~~s~~Gll~~-~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 169 (353)
.-..+|-+++ .. .....+.++|+.++....++..... ... ++.+++.. ++++.. .
T Consensus 30 ~~~~~g~l~v~~~-~~~~~i~~~~~~~~~~~~~~~~~~~--------~p~---~i~~~~~g---~l~v~~---------~ 85 (270)
T 1rwi_B 30 AVDSAGNVYVTSE-GMYGRVVKLATGSTGTTVLPFNGLY--------QPQ---GLAVDGAG---TVYVTD---------F 85 (270)
T ss_dssp EECTTCCEEEEEC-SSSCEEEEECC-----EECCCCSCC--------SCC---CEEECTTC---CEEEEE---------T
T ss_pred EECCCCCEEEEcc-CCCCcEEEecCCCcccceEeeCCcC--------Ccc---eeEECCCC---CEEEEc---------C
Confidence 3344566666 42 3456788899887776555432211 111 45555532 243331 1
Q ss_pred CcceEEEEEcCCCcEEEeeecc-ccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCce
Q 018593 170 GTFKCLVFDSESNRWRKFVSVQ-DYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRS 246 (353)
Q Consensus 170 ~~~~~~vy~s~~~~W~~~~~~~-~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~ 246 (353)
...+.+|+..++.-....... .. |. .+.+ +|.+|+.......|..+|..+............ ...
T Consensus 86 -~~~i~~~d~~~~~~~~~~~~~~~~-p~-------~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~---~p~ 153 (270)
T 1rwi_B 86 -NNRVVTLAAGSNNQTVLPFDGLNY-PE-------GLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN---DPD 153 (270)
T ss_dssp -TTEEEEECTTCSCCEECCCCSCSS-EE-------EEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCC---SCC
T ss_pred -CCEEEEEeCCCceEeeeecCCcCC-Cc-------ceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCC---Cce
Confidence 346778887665433331100 11 11 2222 577887754435899998776654332211111 122
Q ss_pred eEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe--CCcEEEEECCCCe
Q 018593 247 YLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT--HKQVLVYHRNGRL 323 (353)
Q Consensus 247 ~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~yd~~~~~ 323 (353)
.+... +|+|++.......+.+|. .+... ... ...... .....+ .+..+|. +++.. .+.+..||++++.
T Consensus 154 ~i~~~~~g~l~v~~~~~~~i~~~~---~~~~~--~~~-~~~~~~-~~p~~i-~~d~~g~-l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTDNNRVVKLE---AESNN--QVV-LPFTDI-TAPWGI-AVDEAGT-VYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEC---TTTCC--EEE-CCCSSC-CSEEEE-EECTTCC-EEEEETTTSCEEEECTTCSC
T ss_pred eEEEeCCCCEEEEECCCCEEEEEe---cCCCc--eEe-ecccCC-CCceEE-EECCCCC-EEEEECCCCcEEEEcCCCCc
Confidence 34443 588887765555666652 22221 111 111111 122334 5666776 56655 3459999998876
Q ss_pred EEE
Q 018593 324 WKE 326 (353)
Q Consensus 324 ~~~ 326 (353)
...
T Consensus 225 ~~~ 227 (270)
T 1rwi_B 225 STV 227 (270)
T ss_dssp CEE
T ss_pred cee
Confidence 554
No 91
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=84.52 E-value=18 Score=30.74 Aligned_cols=192 Identities=13% Similarity=0.117 Sum_probs=92.5
Q ss_pred CCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCc
Q 018593 104 PEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNR 183 (353)
Q Consensus 104 ~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~ 183 (353)
.....+.+||..++++..+-..... ..... .+.+.+.. . .++..+ ....+.+|+..++.
T Consensus 27 ~~d~~v~i~~~~~~~~~~~~~~~~h------~~~v~---~~~~~~~~-~-~l~~~~----------~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 27 PNNHEVHIYEKSGNKWVQVHELKEH------NGQVT---GVDWAPDS-N-RIVTCG----------TDRNAYVWTLKGRT 85 (372)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEECC------SSCEE---EEEEETTT-T-EEEEEE----------TTSCEEEEEEETTE
T ss_pred eCCCEEEEEeCCCCcEEeeeeecCC------CCccc---EEEEeCCC-C-EEEEEc----------CCCeEEEEECCCCe
Confidence 3567888999888853322221111 11122 45555532 2 233221 13468889988887
Q ss_pred EEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCce-EEEe---eCCCCCCCCCceeEEEE-CCEEE
Q 018593 184 WRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDV-WRKI---SLPDKVGSESRSYLLEC-DGCLS 256 (353)
Q Consensus 184 W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~-~~~~---~~P~~~~~~~~~~l~~~-~g~L~ 256 (353)
+......... ... -..+.+ +|.....+.....+..+|+.+.. +... ..+... .-..+... +|++.
T Consensus 86 ~~~~~~~~~~-~~~----v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 86 WKPTLVILRI-NRA----ARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS---TVLSLDWHPNSVLL 157 (372)
T ss_dssp EEEEEECCCC-SSC----EEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS---CEEEEEECTTSSEE
T ss_pred eeeeEEeecC-CCc----eeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC---CeeEEEEcCCCCEE
Confidence 7554211110 000 001111 34444444443477777777654 2222 222211 12233333 46666
Q ss_pred EEEecCCeEEEEEEecCCC------CCe-------EEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCC
Q 018593 257 VIEISDEWMETWVLKDYYR------DEW-------HSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGR 322 (353)
Q Consensus 257 ~v~~~~~~~~vw~l~~~~~------~~W-------~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~ 322 (353)
+++..+..+.+|.+..... ..| ..+..+. .....+..+ .+..++..++.... +.+.+||++++
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~-~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--SSCGWVHGV-CFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--CCSSCEEEE-EECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecC--CCCCeEEEE-EECCCCCEEEEEeCCCEEEEEECCCC
Confidence 6666778899997642110 112 1222222 122223334 55567775666554 45999999887
Q ss_pred eEEEe
Q 018593 323 LWKEM 327 (353)
Q Consensus 323 ~~~~v 327 (353)
+....
T Consensus 235 ~~~~~ 239 (372)
T 1k8k_C 235 MAVAT 239 (372)
T ss_dssp TEEEE
T ss_pred ceeEE
Confidence 65544
No 92
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=84.30 E-value=21 Score=31.45 Aligned_cols=114 Identities=13% Similarity=0.062 Sum_probs=67.7
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEe-eC---------CCCCCCCCceeEEEE--CCEEEEEEec-------CCeEEEE
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKI-SL---------PDKVGSESRSYLLEC--DGCLSVIEIS-------DEWMETW 268 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~---------P~~~~~~~~~~l~~~--~g~L~~v~~~-------~~~~~vw 268 (353)
+|.++|.+..+ .+.++|..++.-..+ +. +.....+.. .++.. +++||++... ...-+||
T Consensus 237 dG~~~~vs~~g-~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q-~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~ 314 (386)
T 3sjl_D 237 AGRLVWPTYTG-KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ-QVAYHRALDRIYLLVDQRDEWRHKTASRFVV 314 (386)
T ss_dssp TTEEEEEBTTS-EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS-CEEEETTTTEEEEEEEECCTTCTTSCEEEEE
T ss_pred CCcEEEEeCCC-EEEEEECCCCcceeecceeccccccccccccCCCcc-eeeECCCCCeEEEEeccccccccCCCCCEEE
Confidence 78899988875 899999987653322 11 111101011 23333 3688887541 2356899
Q ss_pred EEecCCCCCeEEEEeeccccccCccceeeeeecCCc-EEEEEe--CCcEEEEECCCCeEEEeeee
Q 018593 269 VLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTRE-YVFLAT--HKQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 269 ~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~~--~~~~~~yd~~~~~~~~v~~~ 330 (353)
+++- ..+..+.+++.... ...+ .+..+++ .+|... .+.+.+||..+++...-...
T Consensus 315 viD~---~t~kv~~~i~vg~~---~~~l-avs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 315 VLDA---KTGERLAKFEMGHE---IDSI-NVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp EEET---TTCCEEEEEEEEEE---ECEE-EECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred EEEC---CCCeEEEEEECCCC---cceE-EECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC
Confidence 8855 45667777776321 1234 5666765 566644 34599999999986654333
No 93
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=84.21 E-value=17 Score=30.16 Aligned_cols=147 Identities=12% Similarity=0.043 Sum_probs=72.3
Q ss_pred CcceEEEEEcCCC--cEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCc-eEEEeeCCCCCCCCCce
Q 018593 170 GTFKCLVFDSESN--RWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGD-VWRKISLPDKVGSESRS 246 (353)
Q Consensus 170 ~~~~~~vy~s~~~--~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~-~~~~~~~P~~~~~~~~~ 246 (353)
....+.++|.+++ .|+....-... +... .+.-+|.++. +.. ..+..||+..+ .|+ +..|.... ...
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~-~~~~-----~~~pdG~ilv-s~~-~~V~~~d~~G~~~W~-~~~~~~~~--~~~ 81 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWE-CNSV-----AATKAGEILF-SYS-KGAKMITRDGRELWN-IAAPAGCE--MQT 81 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCC-CCEE-----EECTTSCEEE-ECB-SEEEEECTTSCEEEE-EECCTTCE--EEE
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCC-CcCe-----EECCCCCEEE-eCC-CCEEEECCCCCEEEE-EcCCCCcc--ccc
Confidence 3567888898776 57766210000 1111 2223677777 434 48999999433 344 34442210 111
Q ss_pred eEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe-CCcEEEEECCCCeEE
Q 018593 247 YLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT-HKQVLVYHRNGRLWK 325 (353)
Q Consensus 247 ~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd~~~~~~~ 325 (353)
.-...+|+++++.... .-.++.++..++..|.....-...........+ ....+|.+++... .+.+..||++ ++..
T Consensus 82 ~~~~~dG~~lv~~~~~-~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v-~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 82 ARILPDGNALVAWCGH-PSTILEVNMKGEVLSKTEFETGIERPHAQFRQI-NKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEECTTSCEEEEEEST-TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCC-EECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred cEECCCCCEEEEecCC-CCEEEEEeCCCCEEEEEeccCCCCcccccccCc-eECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 1122467777766531 235566654333344433211111111112223 4556788565544 3459999998 5544
Q ss_pred Eeeee
Q 018593 326 EMYSV 330 (353)
Q Consensus 326 ~v~~~ 330 (353)
+-...
T Consensus 159 w~~~~ 163 (276)
T 3no2_A 159 NSVKL 163 (276)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 44333
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=84.02 E-value=18 Score=30.34 Aligned_cols=105 Identities=10% Similarity=-0.089 Sum_probs=57.2
Q ss_pred CEEEEEECCC-ce--EEEeeCCCCCCCCCceeEEEE--CCEEEEEEecCCeEEEEEEecCC-----CCCeEEEEeecc-c
Q 018593 219 SFILALDLEG-DV--WRKISLPDKVGSESRSYLLEC--DGCLSVIEISDEWMETWVLKDYY-----RDEWHSVDKVSL-R 287 (353)
Q Consensus 219 ~~i~~~D~~~-~~--~~~~~~P~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw~l~~~~-----~~~W~~~~~i~~-~ 287 (353)
..+..||+.+ .. ......+... .-..+... +|++.+++..+..+.+|.++..+ .........-.. .
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~---~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKY---QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSS---CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT
T ss_pred CeEEEEECCccccccceeeecCCCC---ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccc
Confidence 4899999987 32 3333333222 22334444 56777776678899999886541 222222111000 0
Q ss_pred --cccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 288 --CIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 288 --~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
.....+..+ .+..++..++.... +.+.+||+++++....
T Consensus 247 ~~~~~~~i~~~-~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 247 DTNLAYPVNSI-EFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288 (342)
T ss_dssp CCSSCCCEEEE-EECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred ccccceeEEEE-EEcCCCCEEEEecCCceEEEEcCccHhHhhh
Confidence 011123334 55667775665554 4599999998875443
No 95
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=83.68 E-value=34 Score=33.26 Aligned_cols=113 Identities=9% Similarity=0.114 Sum_probs=62.0
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEeeCCC-----CCCCCCceeEEE-ECCE-EEEEEecCCeEEEEEEecCCCCCeEEE
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKISLPD-----KVGSESRSYLLE-CDGC-LSVIEISDEWMETWVLKDYYRDEWHSV 281 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~-----~~~~~~~~~l~~-~~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~~ 281 (353)
|. .|++.....+..||..++++..+..+. ......-..+.+ .+|+ |++... +..+. .++ ..+..+...
T Consensus 368 g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~-~~Gl~--~~d-~~~~~~~~~ 442 (795)
T 4a2l_A 368 KN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH-AGGLS--ILH-RNSGQVENF 442 (795)
T ss_dssp SC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET-TTEEE--EEE-TTTCCEEEE
T ss_pred CC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC-cCcee--EEe-CCCCcEEEe
Confidence 44 455554348999999999998875432 111112234444 3577 776543 23343 332 222343332
Q ss_pred EeeccccccCccceeeeeecCCcEEEEEeCCcEEEEECCCCeEEEee
Q 018593 282 DKVSLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGRLWKEMY 328 (353)
Q Consensus 282 ~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~~~v~ 328 (353)
...........+..+ ..+.+|. +.+++.+.++.||+++++++...
T Consensus 443 ~~~~~~l~~~~v~~i-~~d~~g~-lwigt~~Gl~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 443 NQRNSQLVNENVYAI-LPDGEGN-LWLGTLSALVRFNPEQRSFTTIE 487 (795)
T ss_dssp CTTTSCCSCSCEEEE-EECSSSC-EEEEESSCEEEEETTTTEEEECC
T ss_pred ecCCCCcCCCeeEEE-EECCCCC-EEEEecCceeEEeCCCCeEEEcc
Confidence 211101111112233 3455677 78888888999999999998774
No 96
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=83.64 E-value=18 Score=30.03 Aligned_cols=117 Identities=9% Similarity=0.073 Sum_probs=60.2
Q ss_pred ceEEeeecCCCEEEEEECCCc--eEEEe-eCCCCCCCCCceeEEEEC----CEEEEEEecCCeEEEEEEecCCCCCeEEE
Q 018593 209 GALHWLTDSCSFILALDLEGD--VWRKI-SLPDKVGSESRSYLLECD----GCLSVIEISDEWMETWVLKDYYRDEWHSV 281 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~--~~~~~-~~P~~~~~~~~~~l~~~~----g~L~~v~~~~~~~~vw~l~~~~~~~W~~~ 281 (353)
+.....+..+..|..+|+.+. .+... .+..+.. .-..+.-.. +.+.+.+..+..+.||.++.. ...|...
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~--~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~-~~~~~~~ 246 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE-QGPWKKT 246 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEETTSCEEEEEESST-TSCCEEE
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC--ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC-CCcccee
Confidence 334444444457888887654 34433 3433321 112222222 355544457889999988542 2456543
Q ss_pred EeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECC-CCeEEEeeee
Q 018593 282 DKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRN-GRLWKEMYSV 330 (353)
Q Consensus 282 ~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~-~~~~~~v~~~ 330 (353)
. +........+..+ .+..++..+..... +.+.+|+.. .++|+.+..+
T Consensus 247 ~-~~~~~~~~~v~~~-~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 247 L-LKEEKFPDVLWRA-SWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEV 295 (297)
T ss_dssp E-SSSSCCSSCEEEE-EECSSSCCEEEEETTSCEEEEEECTTSCEEEC---
T ss_pred e-eecccCCCcEEEE-EECCCCCEEEEEcCCCcEEEEEECCCCcEEecccc
Confidence 2 2112222222333 45567775665554 458889877 4688877554
No 97
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=83.47 E-value=22 Score=30.94 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=54.8
Q ss_pred EEeeecCCCEEEEEECCCce--EEEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc--
Q 018593 211 LHWLTDSCSFILALDLEGDV--WRKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL-- 286 (353)
Q Consensus 211 ly~~~~~~~~i~~~D~~~~~--~~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~-- 286 (353)
+...+.....|..+|+.+.. ...+...... .-..+...+|++.+.+..+..+.+|.+...+...- +.....
T Consensus 305 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~--~~~~~~~~ 379 (420)
T 3vl1_A 305 YIYAGYENGMLAQWDLRSPECPVGEFLINEGT---PINNVYFAAGALFVSSGFDTSIKLDIISDPESERP--AIEFETPT 379 (420)
T ss_dssp EEEEEETTSEEEEEETTCTTSCSEEEEESTTS---CEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSC--EECTTSCE
T ss_pred EEEEEeCCCeEEEEEcCCCcCchhhhhccCCC---CceEEEeCCCCEEEEecCCccEEEEeccCCCCCcc--ceeccCcc
Confidence 44444443589999998753 2222221111 22333445788666655778999999876432111 111111
Q ss_pred --ccccCccceeeeeecCCc----EEEEEeCCcEEEEECCC
Q 018593 287 --RCIKGMVPSIFPISQTRE----YVFLATHKQVLVYHRNG 321 (353)
Q Consensus 287 --~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~yd~~~ 321 (353)
......+..+ ++..++. ++..+..+.+..|+++.
T Consensus 380 ~~~~~~~~v~~~-~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 380 FLVSNDDAVSQF-CYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EECCSSCCCCEE-EEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEccCCcceEEE-EEccCCCCcceEEEEcCCceEEEEeccC
Confidence 1122223334 4444444 55555566688898875
No 98
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=83.43 E-value=21 Score=31.58 Aligned_cols=111 Identities=6% Similarity=0.027 Sum_probs=60.2
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCE-EEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGC-LSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
+|.|||.......|..+|+.++....+...... .. ++.. +|+ |+++...... .||.++..+.........+.
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~---~~--ia~~~~g~~l~~~d~~~~~-~I~~~d~~~~~~~~~~g~~~ 214 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG---GK--PAVTKDKQRVYSIGWEGTH-TVYVYMKASGWAPTRIGQLG 214 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETCCB---CB--CEECTTSSEEEEEBSSTTC-EEEEEEGGGTTCEEEEEECC
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccCCC---Cc--eeEecCCCcEEEEecCCCc-eEEEEEcCCCceeEEeeecc
Confidence 688999987656999999998877666322111 11 3332 344 4444333321 56666543322222222222
Q ss_pred cccccCccceeeeeec-CCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 286 LRCIKGMVPSIFPISQ-TREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 286 ~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
.. .......+ .+.. ++. +++... +.++.||+++++...+
T Consensus 215 ~~-~~~~p~~i-av~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 215 ST-FSGKIGAV-ALDETEEW-LYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp TT-SCSCCCBC-EECTTSSE-EEEECTTCEEEEEETTTCCEEEE
T ss_pred ch-hcCCcEEE-EEeCCCCe-EEEEECCCcEEEEECCCCCEEEE
Confidence 11 11112334 5565 566 455433 4599999999886665
No 99
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=83.28 E-value=19 Score=30.14 Aligned_cols=196 Identities=11% Similarity=0.063 Sum_probs=96.5
Q ss_pred cCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcce
Q 018593 94 CNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFK 173 (353)
Q Consensus 94 ~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (353)
.+|-+++.. ....+++.+||.++....++.... ..++.+++... +++.. . ......
T Consensus 41 ~~g~lyv~d-~~~~~I~~~d~~g~~~~~~~~~~~-------------p~gia~~~dG~---l~vad----~---~~~~~~ 96 (306)
T 2p4o_A 41 PDGTIFVTN-HEVGEIVSITPDGNQQIHATVEGK-------------VSGLAFTSNGD---LVATG----W---NADSIP 96 (306)
T ss_dssp TTSCEEEEE-TTTTEEEEECTTCCEEEEEECSSE-------------EEEEEECTTSC---EEEEE----E---CTTSCE
T ss_pred CCCCEEEEe-CCCCeEEEECCCCceEEEEeCCCC-------------ceeEEEcCCCc---EEEEe----c---cCCcce
Confidence 366666664 345678889988754433322211 11566665432 33321 1 111235
Q ss_pred EEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEe---e-----CCCCCCCCCc
Q 018593 174 CLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKI---S-----LPDKVGSESR 245 (353)
Q Consensus 174 ~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~---~-----~P~~~~~~~~ 245 (353)
+..|+..+++.+.....+.. .+.....+..++.+|........|..+|+.+...+.. . .+... ....
T Consensus 97 v~~~d~~~g~~~~~~~~~~~----~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~-~~~p 171 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDA----IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESV-FPAA 171 (306)
T ss_dssp EEEEECTTSCEEEEEECTTC----SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCC-SCSE
T ss_pred EEEEcCCCCeEEEEEeCCCc----cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCC-CCcC
Confidence 66778788877655222111 0000001123456676654335899999987533221 1 11110 0012
Q ss_pred eeEEEECCEEEEEEecCCeEEEEEEecCCC-CCeEEEEeeccccccCccceeeeeecCCcEEEEEe--CCcEEEEECCCC
Q 018593 246 SYLLECDGCLSVIEISDEWMETWVLKDYYR-DEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT--HKQVLVYHRNGR 322 (353)
Q Consensus 246 ~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~-~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~yd~~~~ 322 (353)
.-+...++.||+.......+.++.++..+. ......... .....+ +++.+|. +++.. .+.+..||++ +
T Consensus 172 ngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~------~~P~gi-~vd~dG~-l~va~~~~~~V~~~~~~-G 242 (306)
T 2p4o_A 172 NGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ------TNIDDF-AFDVEGN-LYGATHIYNSVVRIAPD-R 242 (306)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES------CCCSSE-EEBTTCC-EEEECBTTCCEEEECTT-C
T ss_pred CCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc------CCCCCe-EECCCCC-EEEEeCCCCeEEEECCC-C
Confidence 234333457887766666666655532121 111221111 123345 7777888 56654 3559999997 4
Q ss_pred eEEEe
Q 018593 323 LWKEM 327 (353)
Q Consensus 323 ~~~~v 327 (353)
+...+
T Consensus 243 ~~~~~ 247 (306)
T 2p4o_A 243 STTII 247 (306)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 54444
No 100
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=83.24 E-value=24 Score=31.21 Aligned_cols=28 Identities=7% Similarity=0.112 Sum_probs=17.0
Q ss_pred eeecCCcEEEEEeCCcEEEEECCCCeEE
Q 018593 298 PISQTREYVFLATHKQVLVYHRNGRLWK 325 (353)
Q Consensus 298 ~~~~~~~~v~~~~~~~~~~yd~~~~~~~ 325 (353)
.+..+|.++..+.++.+.++|+++++-+
T Consensus 407 ~fspdg~~lasg~d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 407 EFNPMGDTLASAMGYHILIWSQQEARTR 434 (435)
T ss_dssp EECTTSSCEEEECSSEEEECCCC-----
T ss_pred EECCCCCEEEEEcCCcEEEEECCcCeee
Confidence 4566788666666666999999988754
No 101
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=82.34 E-value=21 Score=29.84 Aligned_cols=105 Identities=14% Similarity=0.068 Sum_probs=54.4
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
+|.+...+..+..|..+|+.+..-... .... .-..+....+...++...+..+.+|.++. . ..+..+..
T Consensus 226 ~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~d~~i~iwd~~~---~--~~~~~~~~ 295 (340)
T 4aow_A 226 DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-----IINALCFSPNRYWLCAATGPSIKIWDLEG---K--IIVDELKQ 295 (340)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEEEEEEECSS-----CEEEEEECSSSSEEEEEETTEEEEEETTT---T--EEEEEECC
T ss_pred CCCEEEEEeCCCeEEEEEeccCceeeeecCCc-----eEEeeecCCCCceeeccCCCEEEEEECCC---C--eEEEeccc
Confidence 355444444445888999988654322 2221 11233333444444444567888996532 1 22222221
Q ss_pred -------ccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCe
Q 018593 287 -------RCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 287 -------~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
......+..+ .+..+|..++.+.. +.+.+||++|++
T Consensus 296 ~~~~~~~~~h~~~v~~l-~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 296 EVISTSSKAEPPQCTSL-AWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp C-------CCCCCEEEE-EECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred cceeeeccCCCCCEEEE-EECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 1222223334 56678886666554 459999998875
No 102
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=82.08 E-value=20 Score=29.55 Aligned_cols=147 Identities=12% Similarity=0.068 Sum_probs=69.6
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
|.+|+|... ..+.+.|||..|++...+-..... ..... .+.+.+.. .+ ++.+ ....
T Consensus 34 S~~~~lAvg---~D~tV~iWd~~tg~~~~~~~~~~~------~~~V~---~v~~~~~~-~~--l~sg---------s~Dg 89 (318)
T 4ggc_A 34 SSGNVLAVA---LDNSVYLWSASSGDILQLLQMEQP------GEYIS---SVAWIKEG-NY--LAVG---------TSSA 89 (318)
T ss_dssp CTTSEEEEE---ETTEEEEEETTTCCEEEEEECCST------TCCEE---EEEECTTS-SE--EEEE---------ETTS
T ss_pred CCCCEEEEE---eCCEEEEEECCCCCEEEEEEecCC------CCeEE---EEEECCCC-CE--EEEE---------ECCC
Confidence 456765443 356799999999987664332211 11122 45554432 22 2222 1144
Q ss_pred eEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEE-E
Q 018593 173 KCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLE-C 251 (353)
Q Consensus 173 ~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~-~ 251 (353)
.+.+++.++++-...-..... . ......++.+-..+.....+..++..+.......+..... ....+.. .
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~-~------~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 160 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSA-R------VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--EVCGLRWAP 160 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSS-C------EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--CEEEEEECT
T ss_pred cEEEeecCCceeEEEecCccc-e------EEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccC--ceEEEEEcC
Confidence 778898887743221000000 0 0122233333333333335556666554433322222211 1122222 3
Q ss_pred CCEEEEEEecCCeEEEEEEec
Q 018593 252 DGCLSVIEISDEWMETWVLKD 272 (353)
Q Consensus 252 ~g~L~~v~~~~~~~~vw~l~~ 272 (353)
+|++.+.+..+..+.+|.+..
T Consensus 161 ~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 161 DGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp TSSEEEEEETTSCEEEEESSC
T ss_pred CCCEEEEEecCcceeEEECCC
Confidence 466666555778899997643
No 103
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=81.67 E-value=33 Score=31.70 Aligned_cols=185 Identities=12% Similarity=0.027 Sum_probs=91.8
Q ss_pred eeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEE
Q 018593 96 GLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCL 175 (353)
Q Consensus 96 Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 175 (353)
++++... ......+||..|++...+...+. . .+.+++.+ . .++....+ ..+...+.
T Consensus 123 ~~~~~s~--~~~~~~l~d~~~g~~~~l~~~~~-----------~---~~~~spDG-~-~la~~~~~------~~~~~~i~ 178 (582)
T 3o4h_A 123 AVVFTGA--TEDRVALYALDGGGLRELARLPG-----------F---GFVSDIRG-D-LIAGLGFF------GGGRVSLF 178 (582)
T ss_dssp CEEEEEE--CSSCEEEEEEETTEEEEEEEESS-----------C---EEEEEEET-T-EEEEEEEE------ETTEEEEE
T ss_pred eEEEEec--CCCCceEEEccCCcEEEeecCCC-----------c---eEEECCCC-C-EEEEEEEc------CCCCeEEE
Confidence 4555543 33445589999988777653321 1 33444422 2 23322110 11235688
Q ss_pred EEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCC--EEEEEECCCceEEEeeCCCCCCCCCcee------
Q 018593 176 VFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCS--FILALDLEGDVWRKISLPDKVGSESRSY------ 247 (353)
Q Consensus 176 vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~--~i~~~D~~~~~~~~~~~P~~~~~~~~~~------ 247 (353)
+++..++.++........ ..... ..-||+..+.+.... .|..+|+.+++.. + +......-....
T Consensus 179 ~~d~~~g~~~~l~~~~~~-~~~~~-----~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 179 TSNLSSGGLRVFDSGEGS-FSSAS-----ISPGMKVTAGLETAREARLVTVDPRDGSVE-D-LELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEETTTCCCEEECCSSCE-EEEEE-----ECTTSCEEEEEECSSCEEEEEECTTTCCEE-E-CCCSCSHHHHHCCSEEEE
T ss_pred EEcCCCCCceEeecCCCc-cccce-----ECCCCCEEEEccCCCeeEEEEEcCCCCcEE-E-ccCCCcChhhhhhccccc
Confidence 889888888876321111 11111 112454333433333 7889999988777 2 221110000010
Q ss_pred E-EEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC----cEEEEECCCC
Q 018593 248 L-LECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK----QVLVYHRNGR 322 (353)
Q Consensus 248 l-~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~yd~~~~ 322 (353)
. ..-+|++++....+....+|.+ + +... .+ . ..+..+ .+. ++.+++..... .++.+|.++
T Consensus 251 ~~~spdg~~~~~~~~~g~~~l~~~---g--~~~~---~~-~---~~v~~~-~~s-dg~~l~~~s~~~~p~~l~~~d~~~- 315 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREGRSAVFID---G--ERVE---AP-Q---GNHGRV-VLW-RGKLVTSHTSLSTPPRIVSLPSGE- 315 (582)
T ss_dssp EEECTTSCEEEEEEETTEEEEEET---T--EEEC---CC-S---SEEEEE-EEE-TTEEEEEEEETTEEEEEEEETTCC-
T ss_pred eeEcCCCcEEEEEEcCCcEEEEEE---C--Ceec---cC-C---CceEEE-Eec-CCEEEEEEcCCCCCCeEEEEcCCC-
Confidence 0 1235766666666778899976 2 1111 11 1 112233 445 77766554432 388888876
Q ss_pred eEEEe
Q 018593 323 LWKEM 327 (353)
Q Consensus 323 ~~~~v 327 (353)
+.+.+
T Consensus 316 ~~~~l 320 (582)
T 3o4h_A 316 PLLEG 320 (582)
T ss_dssp EEECC
T ss_pred ceEEE
Confidence 55544
No 104
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=80.40 E-value=42 Score=32.18 Aligned_cols=140 Identities=10% Similarity=0.068 Sum_probs=65.7
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCC-CEEEEEECCCceEEEeeCCCCCCCCCce
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSC-SFILALDLEGDVWRKISLPDKVGSESRS 246 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~-~~i~~~D~~~~~~~~~~~P~~~~~~~~~ 246 (353)
...+.+++.....-+.... ..+ ....++.+ +|.|||..... ..|.++|+....-..+... ... ...
T Consensus 474 ~~~I~v~d~dg~~~~~l~~-~~~------~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~-~l~--~Pn 543 (699)
T 1n7d_A 474 LGTVSVADTKGVKRKTLFR-EQG------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE-NIQ--WPN 543 (699)
T ss_dssp TSCEEEEBSSSCCEEEECC-CSS------CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS-SCS--SCC
T ss_pred CCeEEEEecCCCceEEEEe-CCC------CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC-CCC--Ccc
Confidence 4567777766543333210 000 11223444 58899987532 4788888875443332111 110 122
Q ss_pred eEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--CcEEEEECCCC
Q 018593 247 YLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRNGR 322 (353)
Q Consensus 247 ~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~ 322 (353)
.|+.. +++||++......+.+ ++-.+... ..+.... ... .....+ .+. ++. +|+... +.|..+|+.++
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~--~d~dG~~~-~~~~~~~-~~~-~~P~gl-avd-~~~-lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISS--IDVNGGNR-KTILEDE-KRL-AHPFSL-AVF-EDK-VFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEE--ECSSSSCC-EEECCCS-SSC-SSCCCC-EEE-TTE-EEEECSTTTCEEEEETTTE
T ss_pred EEEEeccCCEEEEEecCCCeEEE--EccCCCce-EEEEecC-CcC-CCceEe-EEE-CCE-EEEEeCCCCeEEEEEccCC
Confidence 34443 5788888765555444 42222121 1111111 011 111122 333 234 554433 34999999887
Q ss_pred eEEEee
Q 018593 323 LWKEMY 328 (353)
Q Consensus 323 ~~~~v~ 328 (353)
+...+.
T Consensus 616 ~~~~~i 621 (699)
T 1n7d_A 616 SDVNLL 621 (699)
T ss_dssp EEEECC
T ss_pred CceEEe
Confidence 766553
No 105
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=80.34 E-value=24 Score=29.29 Aligned_cols=197 Identities=12% Similarity=0.050 Sum_probs=97.0
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
+.+|-+++.. . .+.+.+||..+++... +...... ....... .+.+.+.. -.++..+ ..
T Consensus 60 ~~~~~~l~~~-~-dg~i~iw~~~~~~~~~~~~~~~~~----~~~~~v~---~~~~~~~~--~~l~~~~----------~d 118 (337)
T 1gxr_A 60 SNPTRHVYTG-G-KGCVKVWDISHPGNKSPVSQLDCL----NRDNYIR---SCKLLPDG--CTLIVGG----------EA 118 (337)
T ss_dssp CSSSSEEEEE-C-BSEEEEEETTSTTCCSCSEEEECS----CTTSBEE---EEEECTTS--SEEEEEE----------SS
T ss_pred ecCCcEEEEc-C-CCeEEEEECCCCCceeeeeccccc----CCCCcEE---EEEEcCCC--CEEEEEc----------CC
Confidence 3355555553 2 6788999987765322 1111100 0011111 45555532 2233321 14
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEE
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLL 249 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~ 249 (353)
..+.+|+..++........... ... -..+.+ +|.....+.....+..+|+.+.+.... +..... .-..+.
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~-~~~----i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~-~~~~~~--~i~~~~ 190 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSS-APA----CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ-FQGHTD--GASCID 190 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECS-SSC----EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE-ECCCSS--CEEEEE
T ss_pred CcEEEEECCCCCcceeeecccC-CCc----eEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeee-eecccC--ceEEEE
Confidence 5788999888775444111110 000 001111 454444444435899999988764332 111110 122333
Q ss_pred EE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 250 EC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 250 ~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
.. +|++.+++..+..+.+|.++. . ..+..+... .....+ .+..++..++.... +.+..||+++++...+
T Consensus 191 ~~~~~~~l~~~~~dg~i~~~d~~~---~--~~~~~~~~~---~~v~~~-~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 191 ISNDGTKLWTGGLDNTVRSWDLRE---G--RQLQQHDFT---SQIFSL-GYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT---T--EEEEEEECS---SCEEEE-EECTTSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred ECCCCCEEEEEecCCcEEEEECCC---C--ceEeeecCC---CceEEE-EECCCCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 33 566666666778899996533 2 233333321 112233 55567776666654 5599999999876544
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=79.53 E-value=30 Score=29.98 Aligned_cols=148 Identities=11% Similarity=0.031 Sum_probs=76.2
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEee-CCCCCCCCCcee
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKIS-LPDKVGSESRSY 247 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~-~P~~~~~~~~~~ 247 (353)
...+.+|+..++.....-.. ...... -..+.+ +|.....+..+..|..+|+.+.+-...- ...... ....
T Consensus 153 dg~i~iwd~~~~~~~~~~~~-~~~~~~----v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~ 225 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGP-DVHPDT----IYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT--RPVH 225 (402)
T ss_dssp TSCEEEEETTTTEEEEEECT-TTCCSC----EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS--SCCE
T ss_pred CCEEEEEECCCCCccEEEec-CCCCCc----eEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC--cceE
Confidence 34688999888754333100 000000 001222 4544444444458999999987643332 222110 1223
Q ss_pred EEEE-CCEEEEEE---ecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe--CCcEEEEECCC
Q 018593 248 LLEC-DGCLSVIE---ISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT--HKQVLVYHRNG 321 (353)
Q Consensus 248 l~~~-~g~L~~v~---~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~yd~~~ 321 (353)
+... +|++.+++ ..+..+.+|.+...... .....+.. ......+ .+..++..+++.+ ++.+.+||+++
T Consensus 226 ~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~--~~~~~~~~---~~~v~~~-~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 226 AVFVSEGKILTTGFSRMSERQVALWDTKHLEEP--LSLQELDT---SSGVLLP-FFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp EEECSTTEEEEEEECTTCCEEEEEEETTBCSSC--SEEEECCC---CSSCEEE-EEETTTTEEEEEETTCSCEEEEEECS
T ss_pred EEEcCCCcEEEEeccCCCCceEEEEcCccccCC--ceEEeccC---CCceeEE-EEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 3333 57777766 35678899966442211 11112221 1112334 5566777676654 45599999999
Q ss_pred Ce--EEEeeeec
Q 018593 322 RL--WKEMYSVK 331 (353)
Q Consensus 322 ~~--~~~v~~~~ 331 (353)
++ ...+...+
T Consensus 300 ~~~~~~~l~~~~ 311 (402)
T 2aq5_A 300 EAPFLHYLSMFS 311 (402)
T ss_dssp STTCEEEEEEEC
T ss_pred CCcceEeecccc
Confidence 87 66665543
No 107
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=79.53 E-value=41 Score=31.46 Aligned_cols=122 Identities=11% Similarity=0.048 Sum_probs=64.8
Q ss_pred CceEEEcceEEeeecCCCEEEEEECCCc--eEEEe-eCCCCCCC---CCceeEEEECCEEEEEEecCCeEEEEEEec-CC
Q 018593 202 NQVVFVNGALHWLTDSCSFILALDLEGD--VWRKI-SLPDKVGS---ESRSYLLECDGCLSVIEISDEWMETWVLKD-YY 274 (353)
Q Consensus 202 ~~~v~~~g~ly~~~~~~~~i~~~D~~~~--~~~~~-~~P~~~~~---~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~-~~ 274 (353)
..+++.+|.+|..+... .+.++|..++ .|+.- ..|..... .....++..+|+|++...+ . .+..++- .+
T Consensus 62 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d-g--~l~AlD~~TG 137 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS-RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD-A--SVVALNKNTG 137 (582)
T ss_dssp CCCEEETTEEEEEETTT-EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT-T--EEEEEESSSC
T ss_pred eccEEECCEEEEEcCCC-CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC-C--EEEEEECCCC
Confidence 34688999999988754 6999998765 47664 22221100 0113344567787765432 2 2444432 23
Q ss_pred CCCeEEEEeeccccccCccceeeeeec--CCc-EEEEEe-------CCcEEEEECCCCeEEEee
Q 018593 275 RDEWHSVDKVSLRCIKGMVPSIFPISQ--TRE-YVFLAT-------HKQVLVYHRNGRLWKEMY 328 (353)
Q Consensus 275 ~~~W~~~~~i~~~~~~~~~~~~~~~~~--~~~-~v~~~~-------~~~~~~yd~~~~~~~~v~ 328 (353)
+..|.....-+.........++ .... +|+ .|++.. .+.++.||.+|++..+..
T Consensus 138 ~~~W~~~~~~~~~~~~~~~sP~-v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 138 KVVWKKKFADHGAGYTMTGAPT-IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp CEEEEEECSCGGGTCBCCSCCE-EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred CEEeeecCCCCCcCcccccCCE-EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 3567654211111111112333 2211 232 466654 345999999998766543
No 108
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=79.24 E-value=27 Score=29.32 Aligned_cols=92 Identities=15% Similarity=0.127 Sum_probs=52.7
Q ss_pred cceEEEEEcCC---CcEEEeeeccccceeeeeecCceEEE--cceEEeeecC----------CCEEEEEECCCceEEEee
Q 018593 171 TFKCLVFDSES---NRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDS----------CSFILALDLEGDVWRKIS 235 (353)
Q Consensus 171 ~~~~~vy~s~~---~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~----------~~~i~~~D~~~~~~~~~~ 235 (353)
..++.+|+..+ +..+.... . + . ..++.+ +|.+|..... ...|..||+..+....+.
T Consensus 206 ~~~I~~~~~~~~~~~~~~~~~~---~-~-g----P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~ 276 (322)
T 2fp8_A 206 SHQIVKYWLEGPKKGTAEVLVK---I-P-N----PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP 276 (322)
T ss_dssp GTEEEEEESSSTTTTCEEEEEE---C-S-S----EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEECCCCcCCccceEEe---C-C-C----CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE
Confidence 45777888764 34444311 1 1 0 112333 4776555432 136999999887777777
Q ss_pred CCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEe
Q 018593 236 LPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLK 271 (353)
Q Consensus 236 ~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~ 271 (353)
.|..........+...+|+|++.......+.++.++
T Consensus 277 ~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 277 LPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp CCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred CCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 775421112233455689999887666677766554
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=78.41 E-value=41 Score=32.40 Aligned_cols=97 Identities=15% Similarity=0.191 Sum_probs=57.1
Q ss_pred CEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-C--CEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccc
Q 018593 219 SFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-D--GCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVP 294 (353)
Q Consensus 219 ~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~--g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~ 294 (353)
..|..+|..++++..+ .+..+.. .-..+... + |.+.+.+..+..+.+|.++. ..|.....+.. ....+.
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~--~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~---~~~~~~~~~~~--h~~~V~ 103 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEG--PVWRVDWAHPKFGTILASCSYDGKVLIWKEEN---GRWSQIAVHAV--HSASVN 103 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSS--CEEEEEECCTTSCSEEEEEETTSCEEEEEEET---TEEEEEEEECC--CSSCEE
T ss_pred CcEEEEecCCCCCccceeccCCcC--ceEEEEecCCCCCCEEEEEeCCCeEEEEECCC---CcccccccccC--CCCCeE
Confidence 4788888887766655 3433321 11223332 2 66666666788999998865 45666555543 222222
Q ss_pred eeeeeecC--CcEEEEEeC-CcEEEEECCCCe
Q 018593 295 SIFPISQT--REYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 295 ~~~~~~~~--~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
.+ .+..+ +..++..+. +.+.+||++++.
T Consensus 104 ~v-~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 104 SV-QWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp EE-EECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred EE-EECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 33 34444 665666554 459999998873
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=78.25 E-value=32 Score=29.50 Aligned_cols=146 Identities=10% Similarity=0.052 Sum_probs=68.9
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEE
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLE 250 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~ 250 (353)
...+.+|+..++.-...-..... ........ ..-++.+...+.....+..||+.+...... +..... .-..+..
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~-~~~~~~--~v~~~~~ 194 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEET-VYSHHMSP--VSTKHCLVAVGTRGPKVQLCDLKSGSCSHI-LQGHRQ--EILAVSW 194 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSC-EEEEEECS--SCSSCCEEEEEESSSSEEEEESSSSCCCEE-ECCCCS--CEEEEEE
T ss_pred CCeEEEeeCCCCccceeccCCCc-eeeeEeec--CCCCCcEEEEEcCCCeEEEEeCCCcceeee-ecCCCC--cEEEEEE
Confidence 44788899887654333111111 11111110 011233444444435888999887643221 111110 1223333
Q ss_pred E-CCE-EEEEEecCCeEEEEEEecCCCCCeEEEEeec------c----ccccCccceeeeeecCCcEEEEEeC-CcEEEE
Q 018593 251 C-DGC-LSVIEISDEWMETWVLKDYYRDEWHSVDKVS------L----RCIKGMVPSIFPISQTREYVFLATH-KQVLVY 317 (353)
Q Consensus 251 ~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~------~----~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~y 317 (353)
. +|. +.+++..+..+.+|.+..... .......-. . ......+..+ .+..++..++.... +.+.+|
T Consensus 195 ~~~~~~ll~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 195 SPRYDYILATASADSRVKLWDVRRASG-CLITLDQHNGKKSQAVESANTAHNGKVNGL-CFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTCSSC-CSEECCTTTTCSCCCTTTSSCSCSSCEEEE-EECTTSSEEEEEETTSCEEEE
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCCc-ccccccccccccceeeccccccccCceeEE-EEcCCCCEEEEecCCCeEEEE
Confidence 3 344 555555778899997744321 111110000 0 1122223334 55667776666554 459999
Q ss_pred ECCCCeE
Q 018593 318 HRNGRLW 324 (353)
Q Consensus 318 d~~~~~~ 324 (353)
|+++++-
T Consensus 273 d~~~~~~ 279 (408)
T 4a11_B 273 NSSNGEN 279 (408)
T ss_dssp ETTTCCB
T ss_pred ECCCCcc
Confidence 9998764
No 111
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=77.97 E-value=43 Score=30.89 Aligned_cols=197 Identities=10% Similarity=-0.002 Sum_probs=101.0
Q ss_pred cCeeEEeeecCCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 94 CNGLLCCSSIPEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 94 ~~Gll~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
.+|.+++.. ...+.+.|+|+.|++... ++.. .. . +++.+++.. -.+++.+ . ..
T Consensus 147 p~~~~~vs~-~~d~~V~v~D~~t~~~~~~i~~g----------~~--~-~~v~~spdg--~~l~v~~--------~--d~ 200 (543)
T 1nir_A 147 LPNLFSVTL-RDAGQIALVDGDSKKIVKVIDTG----------YA--V-HISRMSASG--RYLLVIG--------R--DA 200 (543)
T ss_dssp GGGEEEEEE-GGGTEEEEEETTTCCEEEEEECS----------TT--E-EEEEECTTS--CEEEEEE--------T--TS
T ss_pred CCCEEEEEE-cCCCeEEEEECCCceEEEEEecC----------cc--c-ceEEECCCC--CEEEEEC--------C--CC
Confidence 467776664 455789999999988654 3211 01 1 145555532 2344332 1 25
Q ss_pred eEEEEEc--CCCcEEEeeecccc-ceeeeeecCceEEE----cce-EEeeecCCCEEEEEECCCceE-EEeeCCCCCCC-
Q 018593 173 KCLVFDS--ESNRWRKFVSVQDY-YQFSIMNRNQVVFV----NGA-LHWLTDSCSFILALDLEGDVW-RKISLPDKVGS- 242 (353)
Q Consensus 173 ~~~vy~s--~~~~W~~~~~~~~~-~~~~~~~~~~~v~~----~g~-ly~~~~~~~~i~~~D~~~~~~-~~~~~P~~~~~- 242 (353)
.+.+||. .+++ .....+.. .|... .+.- +|. +|........+..+|..+.+- ..++.+.....
T Consensus 201 ~V~v~D~~~~t~~--~~~~i~~g~~p~~v-----a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 201 RIDMIDLWAKEPT--KVAEIKIGIEARSV-----ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp EEEEEETTSSSCE--EEEEEECCSEEEEE-----EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred eEEEEECcCCCCc--EEEEEecCCCcceE-----EeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCc
Confidence 7889998 5543 22111110 01111 1111 454 444443335899999988654 33344321000
Q ss_pred -----C-CceeEEEEC-CEEEEEEe-cCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--C
Q 018593 243 -----E-SRSYLLECD-GCLSVIEI-SDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--K 312 (353)
Q Consensus 243 -----~-~~~~l~~~~-g~L~~v~~-~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~ 312 (353)
. .-..++.+. |..+++.. ....+.+|.+.+.. . .++..++. ......+ .+..+|+.++.... +
T Consensus 274 ~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~-~--l~~~~i~~---~~~~~~~-~~spdg~~l~va~~~~~ 346 (543)
T 1nir_A 274 QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID-N--LTVTSIGA---APFLHDG-GWDSSHRYFMTAANNSN 346 (543)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS-S--CEEEEEEC---CSSCCCE-EECTTSCEEEEEEGGGT
T ss_pred cccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC-c--ceeEEecc---CcCccCc-eECCCCCEEEEEecCCC
Confidence 0 122344443 55555555 56677777553321 1 12334442 1122344 67778886665543 4
Q ss_pred cEEEEECCCCeEEEeeee
Q 018593 313 QVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 313 ~~~~yd~~~~~~~~v~~~ 330 (353)
.+.++|.++++.......
T Consensus 347 ~v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 347 KVAVIDSKDRRLSALVDV 364 (543)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCeEEEeecc
Confidence 599999999987765443
No 112
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=77.76 E-value=32 Score=29.25 Aligned_cols=117 Identities=10% Similarity=0.095 Sum_probs=66.1
Q ss_pred cce-EEeeecCCCEEEEEECCCce-------E------EEeeCCCCCCCCCceeEEEE-CCEEEEEEe-cCCeEEEEEEe
Q 018593 208 NGA-LHWLTDSCSFILALDLEGDV-------W------RKISLPDKVGSESRSYLLEC-DGCLSVIEI-SDEWMETWVLK 271 (353)
Q Consensus 208 ~g~-ly~~~~~~~~i~~~D~~~~~-------~------~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~-~~~~~~vw~l~ 271 (353)
+|. +|........+..||+.... + .....+... ....+... +|+..++.. ....+.+|.++
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS---GPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC---CEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC---CCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 565 66655444578888776543 2 122344332 22334444 466444444 67889999886
Q ss_pred cCCCCCeEEEEeecc-ccccCccceeeeeecCCcEEEEEeCC---cEEEEEC--CCCeEEEeeeec
Q 018593 272 DYYRDEWHSVDKVSL-RCIKGMVPSIFPISQTREYVFLATHK---QVLVYHR--NGRLWKEMYSVK 331 (353)
Q Consensus 272 ~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~yd~--~~~~~~~v~~~~ 331 (353)
. .....+..+.. +........+ .+..+|+.+++.... .+.+||+ ++++++.+..+.
T Consensus 242 ~---g~~~~~~~~~~~~~~~~~~~~i-~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~ 303 (361)
T 3scy_A 242 D---GMLDEIQTVAADTVNAQGSGDI-HLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL 303 (361)
T ss_dssp T---TEEEEEEEEESCSSCCCCEEEE-EECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE
T ss_pred C---CceEEeEEEecCCCCCCCcccE-EECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec
Confidence 3 45555555543 2111112344 677788877665543 4777777 477877776554
No 113
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=77.45 E-value=30 Score=28.86 Aligned_cols=105 Identities=10% Similarity=0.057 Sum_probs=58.7
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
+|.+||.......|..||+.++.-..+..+.. ...++.. +|+|+++........|+.++.. ..+...+..++.
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~-----p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~~~~~~~~~~ 115 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGNQQIHATVEGK-----VSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGTVETLLTLPD 115 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCCEEEEEECSSE-----EEEEEECTTSCEEEEEECTTSCEEEEEECT-TSCEEEEEECTT
T ss_pred CCCEEEEeCCCCeEEEECCCCceEEEEeCCCC-----ceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCeEEEEEeCCC
Confidence 68899998655689999998865444455432 2233433 5888877654334456665422 244544444432
Q ss_pred ccccCccceeeeeecCCcEEEEEe--CCcEEEEECCCCe
Q 018593 287 RCIKGMVPSIFPISQTREYVFLAT--HKQVLVYHRNGRL 323 (353)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~yd~~~~~ 323 (353)
... .... +...++. +++.. .+.++.+|+.+++
T Consensus 116 ~~~---~~g~-~~~~~~~-~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 116 AIF---LNGI-TPLSDTQ-YLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp CSC---EEEE-EESSSSE-EEEEETTTTEEEEEETTTTE
T ss_pred ccc---cCcc-cccCCCc-EEEEECCCCeEEEEeCCCCc
Confidence 111 1122 3344555 44443 4569999998764
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=77.37 E-value=17 Score=37.22 Aligned_cols=184 Identities=13% Similarity=0.012 Sum_probs=88.1
Q ss_pred CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcE
Q 018593 105 EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRW 184 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W 184 (353)
....+.+||..+++...+..... ... .+.+.+ +. +++..+ ....+.+|+..++.-
T Consensus 1023 ~dg~i~vwd~~~~~~~~~~~~~~---------~v~---~~~~~~--~~-~l~~~~----------~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1023 EDSVIQVWNWQTGDYVFLQAHQE---------TVK---DFRLLQ--DS-RLLSWS----------FDGTVKVWNVITGRI 1077 (1249)
T ss_dssp SSSBEEEEETTTTEEECCBCCSS---------CEE---EEEECS--SS-EEEEEE----------SSSEEEEEETTTTCC
T ss_pred CCCEEEEEECCCCceEEEecCCC---------cEE---EEEEcC--CC-cEEEEE----------CCCcEEEEECCCCce
Confidence 45678889988887765432221 122 333433 22 344332 134688888877643
Q ss_pred EEe-eeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecC
Q 018593 185 RKF-VSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISD 262 (353)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~ 262 (353)
... ...... -... .+.-+|.....+..+..+..+|..+.+-.. .+..... .-..+..+ +|++.+.+..+
T Consensus 1078 ~~~~~~~~~~-v~~~-----~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~-~l~~h~~--~v~~~~~s~dg~~lat~~~d 1148 (1249)
T 3sfz_A 1078 ERDFTCHQGT-VLSC-----AISSDATKFSSTSADKTAKIWSFDLLSPLH-ELKGHNG--CVRCSAFSLDGILLATGDDN 1148 (1249)
T ss_dssp CEEEECCSSC-CCCE-----EECSSSSSCEEECCSSCCCEECSSSSSCSB-CCCCCSS--CEEEEEECSSSSEEEEEETT
T ss_pred eEEEcccCCc-EEEE-----EECCCCCEEEEEcCCCcEEEEECCCcceee-eeccCCC--cEEEEEECCCCCEEEEEeCC
Confidence 211 000000 0011 111134433334333467777776654111 1111110 12233333 46666666677
Q ss_pred CeEEEEEEecCCCCCeEEEEeecc----ccccCccceeeeeecCCcEEEEEeCCcEEEEECCCCeEEE
Q 018593 263 EWMETWVLKDYYRDEWHSVDKVSL----RCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGRLWKE 326 (353)
Q Consensus 263 ~~~~vw~l~~~~~~~W~~~~~i~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~~~ 326 (353)
..+.+|.++.... .... ..+.. ......+..+ .+..+|..++ ...+.+.+||+++++...
T Consensus 1149 g~i~vwd~~~~~~-~~~~-~~~~~~~~~~~~~~~v~~l-~fs~dg~~l~-s~~g~v~vwd~~~g~~~~ 1212 (1249)
T 3sfz_A 1149 GEIRIWNVSDGQL-LHSC-APISVEEGTATHGGWVTDV-CFSPDSKTLV-SAGGYLKWWNVATGDSSQ 1212 (1249)
T ss_dssp SCCCEEESSSSCC-CCCC-CCCC-------CCSCCCEE-EECTTSSCEE-EESSSEEEBCSSSCBCCC
T ss_pred CEEEEEECCCCce-EEEe-ccccccccccccCceEEEE-EECCCCCEEE-ECCCeEEEEECCCCceee
Confidence 7899997754221 1110 00000 1223334455 6777888554 445789999999876543
No 115
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=77.32 E-value=32 Score=29.06 Aligned_cols=196 Identities=11% Similarity=-0.042 Sum_probs=92.7
Q ss_pred eecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 92 ASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 92 ~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
+..+|.+++.. .....++++||.+++...+..+. . .. ++.+++.. ++++.. .
T Consensus 57 ~~~~~~l~~~d-~~~~~i~~~d~~~~~~~~~~~~~-~---------v~---~i~~~~dg---~l~v~~-----------~ 108 (326)
T 2ghs_A 57 DPASGTAWWFN-ILERELHELHLASGRKTVHALPF-M---------GS---ALAKISDS---KQLIAS-----------D 108 (326)
T ss_dssp ETTTTEEEEEE-GGGTEEEEEETTTTEEEEEECSS-C---------EE---EEEEEETT---EEEEEE-----------T
T ss_pred eCCCCEEEEEE-CCCCEEEEEECCCCcEEEEECCC-c---------ce---EEEEeCCC---eEEEEE-----------C
Confidence 33445555553 33568889999988766543221 1 11 44555432 233221 1
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecC------CCEEEEEECCCceEEEeeCCCCCCCCCc
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDS------CSFILALDLEGDVWRKISLPDKVGSESR 245 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~------~~~i~~~D~~~~~~~~~~~P~~~~~~~~ 245 (353)
..+.+|+..+++.+.........+. .....-.+.-+|.+|+.... ...|..+| +++...+.-... ..
T Consensus 109 ~gl~~~d~~~g~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~----~~ 181 (326)
T 2ghs_A 109 DGLFLRDTATGVLTLHAELESDLPG-NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS----IP 181 (326)
T ss_dssp TEEEEEETTTCCEEEEECSSTTCTT-EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES----SE
T ss_pred CCEEEEECCCCcEEEEeeCCCCCCC-CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc----cc
Confidence 2478889888887765321110000 01111112225776554321 13688888 455554421000 12
Q ss_pred eeEEEE-CCE-EEEEEecCCeEEEEEEe-cCC-C--CCeEEEEeeccccccCccceeeeeecCCcEEEEEe--CCcEEEE
Q 018593 246 SYLLEC-DGC-LSVIEISDEWMETWVLK-DYY-R--DEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT--HKQVLVY 317 (353)
Q Consensus 246 ~~l~~~-~g~-L~~v~~~~~~~~vw~l~-~~~-~--~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~y 317 (353)
..+... +|+ |+++......+.+|.++ +.+ . ..- ....++. .......+ .++.+|. +++.+ .+.+..|
T Consensus 182 ~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~-~~~~~~~--~~~~p~gi-~~d~~G~-lwva~~~~~~v~~~ 256 (326)
T 2ghs_A 182 NSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAE-VFIDSTG--IKGGMDGS-VCDAEGH-IWNARWGEGAVDRY 256 (326)
T ss_dssp EEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCE-EEEECTT--SSSEEEEE-EECTTSC-EEEEEETTTEEEEE
T ss_pred CCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCce-EEEECCC--CCCCCCee-EECCCCC-EEEEEeCCCEEEEE
Confidence 233433 454 56554444555555443 122 1 110 1112211 11122344 6677887 55555 3569999
Q ss_pred ECCCCeEEEe
Q 018593 318 HRNGRLWKEM 327 (353)
Q Consensus 318 d~~~~~~~~v 327 (353)
|++++..+.+
T Consensus 257 d~~g~~~~~i 266 (326)
T 2ghs_A 257 DTDGNHIARY 266 (326)
T ss_dssp CTTCCEEEEE
T ss_pred CCCCCEEEEE
Confidence 9966555544
No 116
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=77.22 E-value=43 Score=31.15 Aligned_cols=120 Identities=10% Similarity=0.025 Sum_probs=64.9
Q ss_pred CceEEEcceEEeeec-CCCEEEEEEC-CCc--eEEEeeCCCCCC-------CCCceeEEEECCEEEEEEecCCeEEEEEE
Q 018593 202 NQVVFVNGALHWLTD-SCSFILALDL-EGD--VWRKISLPDKVG-------SESRSYLLECDGCLSVIEISDEWMETWVL 270 (353)
Q Consensus 202 ~~~v~~~g~ly~~~~-~~~~i~~~D~-~~~--~~~~~~~P~~~~-------~~~~~~l~~~~g~L~~v~~~~~~~~vw~l 270 (353)
..+++.+|.+|.... .. .+.++|. .++ .|+.- ++.... .......+..+|+|++...+ . .+..+
T Consensus 56 ~~P~v~~g~vyv~~~~~~-~v~AlD~~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-g--~l~al 130 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPN-NTYALNLNDPGKIVWQHK-PKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN-G--HLLAL 130 (571)
T ss_dssp SCCEEETTEEEEECSTTT-CEEEEETTCTTSEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-S--EEEEE
T ss_pred cccEEECCEEEEEeCCCC-EEEEEeCCCCccEEEEEc-CCCCccccccccccccccccEEECCEEEEEeCC-C--EEEEE
Confidence 446888999999887 54 8999998 664 47653 221100 00122345567887765432 2 34445
Q ss_pred ec-CCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-------CcEEEEECCCCeEEEeeee
Q 018593 271 KD-YYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-------KQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 271 ~~-~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~yd~~~~~~~~v~~~ 330 (353)
+- .++..|.....-..........+. + .++. +++... +.++.||.+|++..+-...
T Consensus 131 D~~tG~~~W~~~~~~~~~~~~~~~~P~--v-~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 131 DAKTGKINWEVEVCDPKVGSTLTQAPF--V-AKDT-VLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCE--E-ETTE-EEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ECCCCCEEEEecCCCCCccceeccCCE--E-ECCE-EEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 42 233567654211101111112222 1 2454 666553 4699999999876654443
No 117
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=77.12 E-value=36 Score=29.50 Aligned_cols=105 Identities=10% Similarity=-0.042 Sum_probs=55.6
Q ss_pred EEeeecCCCEEEEEECCCceEEEeeC-CCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecccc
Q 018593 211 LHWLTDSCSFILALDLEGDVWRKISL-PDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRC 288 (353)
Q Consensus 211 ly~~~~~~~~i~~~D~~~~~~~~~~~-P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~ 288 (353)
+...+..+..|..+|+.+.+....-. ..... .-..+... +|++.+++..+..+.+|.+.. . ..+..+....
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~--~~~~~~~~~~ 218 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD--TIYSVDWSRDGALICTSCRDKRVRVIEPRK---G--TVVAEKDRPH 218 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTTCCS--CEEEEEECTTSSCEEEEETTSEEEEEETTT---T--EEEEEEECSS
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCCCCC--ceEEEEECCCCCEEEEEecCCcEEEEeCCC---C--ceeeeeccCC
Confidence 44444444589999999876543321 22211 12233333 577666666778999996533 2 2334441111
Q ss_pred ccCccceeeeeecCCcEEEEE----eCCcEEEEECCCCe
Q 018593 289 IKGMVPSIFPISQTREYVFLA----THKQVLVYHRNGRL 323 (353)
Q Consensus 289 ~~~~~~~~~~~~~~~~~v~~~----~~~~~~~yd~~~~~ 323 (353)
.......+ .+..++.+++.+ .++.+.+||+++.+
T Consensus 219 ~~~~~~~~-~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 219 EGTRPVHA-VFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp CSSSCCEE-EECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CCCcceEE-EEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 11112233 445677755555 23449999998854
No 118
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=76.90 E-value=31 Score=28.69 Aligned_cols=119 Identities=9% Similarity=0.107 Sum_probs=65.5
Q ss_pred cc-eEEeeecCCCEEEEEECCC-ceEEE-----eeCCCCCCCCCceeEEEE-CCE-EEEEEecCCeEEEEEEecCCCCCe
Q 018593 208 NG-ALHWLTDSCSFILALDLEG-DVWRK-----ISLPDKVGSESRSYLLEC-DGC-LSVIEISDEWMETWVLKDYYRDEW 278 (353)
Q Consensus 208 ~g-~ly~~~~~~~~i~~~D~~~-~~~~~-----~~~P~~~~~~~~~~l~~~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W 278 (353)
+| .+|........+..||+.+ ++... ...+... ....+... +|+ |+++......+.+|.++.. ...+
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~ 214 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA---GPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNI 214 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC---CEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCC
T ss_pred CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC---CcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcE
Confidence 45 3655552335899999987 65543 2333222 12233333 465 4444446788999977432 2445
Q ss_pred EEEEeecc-c-ccc--CccceeeeeecCCcEEEEEeC--CcEEEEECC--CCeEEEeeeec
Q 018593 279 HSVDKVSL-R-CIK--GMVPSIFPISQTREYVFLATH--KQVLVYHRN--GRLWKEMYSVK 331 (353)
Q Consensus 279 ~~~~~i~~-~-~~~--~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~--~~~~~~v~~~~ 331 (353)
.....+.. + ... .....+ .+..+|+.+++... +.+.+||++ +++.+.+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~i-~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 215 ECVQTLDMMPENFSDTRWAADI-HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp EEEEEEECSCTTCCSCCCEEEE-EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE
T ss_pred EEEeeccccCccccccCCccce-EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec
Confidence 44444432 1 111 112234 66777876765553 459999998 66777775554
No 119
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=76.67 E-value=31 Score=28.53 Aligned_cols=143 Identities=10% Similarity=-0.025 Sum_probs=81.9
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCce-EEEeeCCCCCCCCCceeEE
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDV-WRKISLPDKVGSESRSYLL 249 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~-~~~~~~P~~~~~~~~~~l~ 249 (353)
...+.++|.++++=... ..+ +...+ .......++.+|.+.-....+.+||+.+.+ -..++.|.. ..-+.
T Consensus 64 ~S~v~~vD~~Tgkv~~~---~~l-~~~~F-geGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e-----G~glt 133 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQ---IEL-GKRYF-GEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE-----GWGLT 133 (262)
T ss_dssp EEEEEEECTTTCCEEEE---EEC-CTTCC-EEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-----CCCEE
T ss_pred CceEEEEECCCCcEEEE---Eec-CCccc-eeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCC-----ceEEe
Confidence 56888999999864333 111 11111 111345678999987665799999998855 455566542 23344
Q ss_pred EECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc--ccc-CccceeeeeecCCcEEEEEeC--CcEEEEECCCCeE
Q 018593 250 ECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR--CIK-GMVPSIFPISQTREYVFLATH--KQVLVYHRNGRLW 324 (353)
Q Consensus 250 ~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~--~~~-~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~~~ 324 (353)
.-+++|++..+ .. .||.+ |..+.+ .+.+|... +.. ....-+.++ +|. ++.... +.+...|++|++.
T Consensus 134 ~dg~~L~~SdG-s~--~i~~i-Dp~T~~--v~~~I~V~~~g~~~~~lNELe~~--~G~-lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 134 HNDQYLIMSDG-TP--VLRFL-DPESLT--PVRTITVTAHGEELPELNELEWV--DGE-IFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp ECSSCEEECCS-SS--EEEEE-CTTTCS--EEEEEECEETTEECCCEEEEEEE--TTE-EEEEETTSSEEEEECTTTCBE
T ss_pred cCCCEEEEECC-CC--eEEEE-cCCCCe--EEEEEEeccCCccccccceeEEE--CCE-EEEEEccCCeEEEEECCCCcE
Confidence 44456776543 22 46666 333322 44455542 111 111112122 676 777764 3499999999999
Q ss_pred EEeeeecc
Q 018593 325 KEMYSVKY 332 (353)
Q Consensus 325 ~~v~~~~~ 332 (353)
...-++.+
T Consensus 205 ~~~Id~~~ 212 (262)
T 3nol_A 205 TGIIDLNG 212 (262)
T ss_dssp EEEEECTT
T ss_pred EEEEECCc
Confidence 88877754
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=76.26 E-value=34 Score=28.87 Aligned_cols=107 Identities=11% Similarity=0.089 Sum_probs=60.8
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEee-CCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKIS-LPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~-~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
+|.....+..+..+..+|+.+++...+. .+... .-..+... +|++.+.+..+..+.+|.+.... -. ...+.
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~---~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~---~~-~~~~~ 210 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDV---EYSSGVLHKDSLLLALYSPDGILDVYNLSSPD---QA-SSRFP 210 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSC---CCCEEEECTTSCEEEEECTTSCEEEEESSCTT---SC-CEECC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCC---ceEEEEECCCCCEEEEEcCCCEEEEEECCCCC---CC-ccEEe
Confidence 3444444444458999999987764432 22221 11233333 46766666678899999764421 11 01121
Q ss_pred cccccCccceeeeeecCCcEEEEEeCCcEEEEECCCCe
Q 018593 286 LRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGRL 323 (353)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~ 323 (353)
. .....+..+ .+..++..++....+.+.+||+++.+
T Consensus 211 ~-~h~~~v~~l-~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 211 V-DEEAKIKEV-KFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp C-CTTSCEEEE-EECTTSSEEEEEESSBEEEEETTSST
T ss_pred c-cCCCCEEEE-EEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 1 122333444 56678887777776789999998874
No 121
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=73.77 E-value=8.7 Score=33.51 Aligned_cols=103 Identities=11% Similarity=-0.025 Sum_probs=41.5
Q ss_pred EcceEEeeecCCCEEEEEECCCce--EEEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEee
Q 018593 207 VNGALHWLTDSCSFILALDLEGDV--WRKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 207 ~~g~ly~~~~~~~~i~~~D~~~~~--~~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i 284 (353)
.+|.+|.-... ..+.++|..+++ |+. ..+... ...-.++.|++.. .+..+..|.. +.+...|.....-
T Consensus 91 ~~~~v~~g~~d-g~v~a~D~~tG~~~w~~-~~~~~~------~~~p~~~~v~~~~-~dg~v~a~d~-~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 91 SDGILYMGKKQ-DIWYVIDLLTGEKQQTL-SSAFAD------SLSPSTSLLYLGR-TEYTITMYDT-KTRELRWNATYFD 160 (369)
T ss_dssp ----CCCCEEE-EEEEEECCC-----------------------------EEEEE-EEEEEECCCS-SSSSCCCEEEEEE
T ss_pred cCCEEEEEeCC-CEEEEEECCCCcEEEEe-cCCCcc------cccccCCEEEEEe-cCCEEEEEEC-CCCCEEEeEeccc
Confidence 56777755444 379999998764 442 222111 1111344554433 2334444422 1233568764211
Q ss_pred ccccccCccceeeeeec----CCcEEEEEe-CCcEEEEECCCCeEEEeee
Q 018593 285 SLRCIKGMVPSIFPISQ----TREYVFLAT-HKQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 285 ~~~~~~~~~~~~~~~~~----~~~~v~~~~-~~~~~~yd~~~~~~~~v~~ 329 (353)
. ..+ .+.. ++. +++.. ++.++.+|.++++..+-..
T Consensus 161 ~-------~~~--~~~~~~~~~~~-v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 161 Y-------AAS--LPEDDVDYKMS-HFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp E-------CCB--CCCCCTTCCCC-EEEEETSCEEEEECTTTCCEEEEEE
T ss_pred c-------cCc--cccCCccccce-EEEECCCCEEEEEECCCCcEEEEec
Confidence 0 011 1111 245 44444 4569999999987654433
No 122
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=73.65 E-value=47 Score=29.21 Aligned_cols=137 Identities=15% Similarity=0.132 Sum_probs=70.6
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceE-EEeeCCCCCCCCCceeEE
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVW-RKISLPDKVGSESRSYLL 249 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~-~~~~~P~~~~~~~~~~l~ 249 (353)
...+.+||..++.-... .... ......+..+|.....+..+..|..+|+.+.+- ..+..+.... ....-+
T Consensus 298 d~~i~i~d~~~~~~~~~--~~~~-----~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~v~~~ 368 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHT--LTGH-----QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ--SAVTCL 368 (445)
T ss_dssp TSCEEEEETTTCCEEEE--ECCC-----CSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCS--SCEEEE
T ss_pred CCeEEEEECCCCCEEEE--EcCC-----cccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCC--CCEEEE
Confidence 34677888776642211 0100 000113334555555554445899999987653 3333332211 223334
Q ss_pred EECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc---ccccCccceeeeeecCCcEEEEEeCCc-----EEEEECCC
Q 018593 250 ECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL---RCIKGMVPSIFPISQTREYVFLATHKQ-----VLVYHRNG 321 (353)
Q Consensus 250 ~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~yd~~~ 321 (353)
..++.+.+++..+..+.+|.++. .+ .+..+.. ......+..+ .+..++.++..+..+. +.+||.+.
T Consensus 369 ~~~~~~l~s~~~dg~v~iwd~~~---~~--~~~~~~~~~~~~~~~~v~~~-~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 369 QFNKNFVITSSDDGTVKLWDLKT---GE--FIRNLVTLESGGSGGVVWRI-RASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EECSSEEEEEETTSEEEEEETTT---CC--EEEEEEECTTGGGTCEEEEE-EECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EECCCEEEEEeCCCeEEEEECCC---Cc--eeeeeeccccCCCCceEEEE-EecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 45677766666788999996643 33 3333311 2233333334 5556676555554332 88888776
Q ss_pred C
Q 018593 322 R 322 (353)
Q Consensus 322 ~ 322 (353)
+
T Consensus 443 ~ 443 (445)
T 2ovr_B 443 D 443 (445)
T ss_dssp C
T ss_pred C
Confidence 4
No 123
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=73.43 E-value=71 Score=31.18 Aligned_cols=151 Identities=12% Similarity=0.115 Sum_probs=78.4
Q ss_pred EEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCC-
Q 018593 143 GLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSC- 218 (353)
Q Consensus 143 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~- 218 (353)
|+++|...+ +|+.. +.....+++++.....-+.+.. ..+ ....++.+ +|.|||.....
T Consensus 475 GLAvD~~~~--~LY~t---------D~~~~~I~v~~ldG~~~~~l~~-~~l------~~P~gIaVDp~~g~LYwtD~g~~ 536 (791)
T 3m0c_C 475 GLAVDWIHS--NIYWT---------DSVLGTVSVADTKGVKRKTLFR-ENG------SKPRAIVVDPVHGFMYWTDWGTP 536 (791)
T ss_dssp EEEEETTTT--EEEEE---------ETTTTEEEEEETTSSSEEEEEE-CTT------CCEEEEEEETTTTEEEEEECSSS
T ss_pred eeeeeecCC--cEEEE---------ecCCCeEEEEeCCCCeEEEEEe-CCC------CCcceEEEecCCCCEEEecCCCC
Confidence 667776443 35544 2235578888877554444411 111 01124444 48999997543
Q ss_pred CEEEEEECCCceEEEeeCCCCCCCCCceeEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCcccee
Q 018593 219 SFILALDLEGDVWRKISLPDKVGSESRSYLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSI 296 (353)
Q Consensus 219 ~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~ 296 (353)
..|.++++....-..+.. .... ....|+.. +|+||++...... |++++-.+....+.+.. . . ....++
T Consensus 537 ~~I~~~~~dG~~~~~lv~-~~l~--~P~GLavD~~~~~LYwaD~~~~~--I~~~d~dG~~~~~v~~~-~-~---~l~~P~ 606 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVT-ENIQ--WPNGITLDLLSGRLYWVDSKLHS--ISSIDVNGGNRKTILED-E-K---RLAHPF 606 (791)
T ss_dssp CEEEEEETTSCCEEEEEC-SSCS--CEEEEEEETTTTEEEEEETTTTE--EEEEETTSCSCEEEEEC-T-T---TTSSEE
T ss_pred CeEEEEecCCCceEEEEe-CCCC--CceEEEEecCCCeEEEEeCCCCc--EEEEecCCCceEEEecC-C-C---ccCCCC
Confidence 589999998765544421 1110 22344443 6899998764444 55554433344433321 0 0 111233
Q ss_pred eeeec-CCcEEEEEeC--CcEEEEECCCCe
Q 018593 297 FPISQ-TREYVFLATH--KQVLVYHRNGRL 323 (353)
Q Consensus 297 ~~~~~-~~~~v~~~~~--~~~~~yd~~~~~ 323 (353)
+++. ++. ||+... +.|..+|..+++
T Consensus 607 -glav~~~~-lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 607 -SLAVFEDK-VFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp -EEEEETTE-EEEEETTTTEEEEEETTTCC
T ss_pred -EEEEeCCE-EEEEECCCCEEEEEeCCCCc
Confidence 3332 344 555433 348889977663
No 124
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=73.41 E-value=47 Score=29.14 Aligned_cols=106 Identities=12% Similarity=0.036 Sum_probs=58.1
Q ss_pred eEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEe
Q 018593 204 VVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDK 283 (353)
Q Consensus 204 ~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~ 283 (353)
.+..+|.....+..+..|..+|+.+.+.... +.... .....+..+|.+.+++..+..+.+|.+.. . ..+..
T Consensus 261 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~---~~v~~~~~~~~~l~~g~~dg~i~iwd~~~---~--~~~~~ 331 (435)
T 1p22_A 261 VVDFDDKYIVSASGDRTIKVWNTSTCEFVRT-LNGHK---RGIACLQYRDRLVVSGSSDNTIRLWDIEC---G--ACLRV 331 (435)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEE-EECCS---SCEEEEEEETTEEEEEETTSCEEEEETTT---C--CEEEE
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCcCcEEEE-EcCCC---CcEEEEEeCCCEEEEEeCCCeEEEEECCC---C--CEEEE
Confidence 3444666555555446899999988754322 11111 12333444677766666778899996633 1 23333
Q ss_pred eccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCe
Q 018593 284 VSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 284 i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
+.. ... .+.++.-++..++.+.. +.+.+||+++++
T Consensus 332 ~~~--h~~---~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 332 LEG--HEE---LVRCIRFDNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp ECC--CSS---CEEEEECCSSEEEEEETTSCEEEEEHHHHT
T ss_pred EeC--CcC---cEEEEEecCCEEEEEeCCCcEEEEECCCCC
Confidence 322 111 11133336665666554 459999987654
No 125
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=73.25 E-value=36 Score=27.73 Aligned_cols=144 Identities=13% Similarity=-0.013 Sum_probs=84.1
Q ss_pred CcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCce-EEEeeCCCCCCCCCceeE
Q 018593 170 GTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDV-WRKISLPDKVGSESRSYL 248 (353)
Q Consensus 170 ~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~-~~~~~~P~~~~~~~~~~l 248 (353)
+...+.++|.++++=.... .+ +...+ .......++.+|.+.-....+.+||..+.+ -..++.|.. ..-|
T Consensus 41 g~S~v~~vD~~tgkv~~~~---~l-~~~~f-geGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~-----Gwgl 110 (243)
T 3mbr_X 41 GRSSVRKVDLETGRILQRA---EV-PPPYF-GAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE-----GWAL 110 (243)
T ss_dssp TSCEEEEEETTTCCEEEEE---EC-CTTCC-EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSC-----CCEE
T ss_pred CCceEEEEECCCCCEEEEE---eC-CCCcc-eeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC-----ceEE
Confidence 3568899999998654441 11 11111 112455678999998666799999998855 344566532 2344
Q ss_pred EEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc--cccC-ccceeeeeecCCcEEEEEeC--CcEEEEECCCCe
Q 018593 249 LECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR--CIKG-MVPSIFPISQTREYVFLATH--KQVLVYHRNGRL 323 (353)
Q Consensus 249 ~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~--~~~~-~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~~ 323 (353)
..-+++|++..+ .. .|+.+ |.++.+ .+.+|... +... ...-+ -..+|. ++.... +.+.+.|++|++
T Consensus 111 t~dg~~L~vSdg-s~--~l~~i-Dp~t~~--~~~~I~V~~~g~~~~~lNeL--e~~~G~-lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 111 TSDDSHLYMSDG-TA--VIRKL-DPDTLQ--QVGSIKVTAGGRPLDNLNEL--EWVNGE-LLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp EECSSCEEEECS-SS--EEEEE-CTTTCC--EEEEEECEETTEECCCEEEE--EEETTE-EEEEETTTTEEEEECTTTCB
T ss_pred eeCCCEEEEECC-CC--eEEEE-eCCCCe--EEEEEEEccCCcccccceee--EEeCCE-EEEEECCCCeEEEEECCCCC
Confidence 444567777653 33 36666 433322 44445541 1111 01111 112676 777764 449999999999
Q ss_pred EEEeeeecc
Q 018593 324 WKEMYSVKY 332 (353)
Q Consensus 324 ~~~v~~~~~ 332 (353)
.....++.+
T Consensus 182 V~~~idl~~ 190 (243)
T 3mbr_X 182 VVAWIDLQA 190 (243)
T ss_dssp EEEEEECGG
T ss_pred EEEEEECCc
Confidence 988877764
No 126
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=73.13 E-value=39 Score=28.00 Aligned_cols=192 Identities=10% Similarity=0.017 Sum_probs=92.3
Q ss_pred CeeEEeeecCCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcce
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFK 173 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (353)
+|-.++.. .....+.|||..+++... +..- ..... .+.+.+.. . .++..+ ....
T Consensus 66 ~~~~l~s~-s~d~~i~vwd~~~~~~~~~~~~h---------~~~v~---~~~~~~~~-~-~l~sgs----------~D~~ 120 (304)
T 2ynn_A 66 RKNWIIVG-SDDFRIRVFNYNTGEKVVDFEAH---------PDYIR---SIAVHPTK-P-YVLSGS----------DDLT 120 (304)
T ss_dssp GGTEEEEE-ETTSEEEEEETTTCCEEEEEECC---------SSCEE---EEEECSSS-S-EEEEEE----------TTSC
T ss_pred CCCEEEEE-CCCCEEEEEECCCCcEEEEEeCC---------CCcEE---EEEEcCCC-C-EEEEEC----------CCCe
Confidence 44444443 356789999998887543 2211 11122 45554432 2 233221 1446
Q ss_pred EEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEE
Q 018593 174 CLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLL 249 (353)
Q Consensus 174 ~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~ 249 (353)
+.+++.+++ +........- ...-..+.+ ++.+...+..+..|..+|+.+..-... ..... .....+
T Consensus 121 v~lWd~~~~-~~~~~~~~~h-----~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~----~~v~~~ 190 (304)
T 2ynn_A 121 VKLWNWENN-WALEQTFEGH-----EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE----RGVNYV 190 (304)
T ss_dssp EEEEEGGGT-TEEEEEECCC-----CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCT----TCEEEE
T ss_pred EEEEECCCC-cchhhhhccc-----CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCc----CcEEEE
Confidence 778887654 2222110100 000012222 233444444445888899876432111 11111 111222
Q ss_pred EE----CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeE
Q 018593 250 EC----DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLW 324 (353)
Q Consensus 250 ~~----~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~ 324 (353)
.. ++.+.+.+..+..+.+|.++. -..+..+. +....+..+ .+..++..++.... +.+.+||.++.+.
T Consensus 191 ~~~~~~~~~~l~s~s~D~~i~iWd~~~-----~~~~~~~~--~h~~~v~~~-~~~p~~~~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 191 DYYPLPDKPYMITASDDLTIKIWDYQT-----KSCVATLE--GHMSNVSFA-VFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp EECCSTTCCEEEEEETTSEEEEEETTT-----TEEEEEEE--CCSSCEEEE-EECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred EEEEcCCCCEEEEEcCCCeEEEEeCCC-----CccceeeC--CCCCCEEEE-EECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 21 345555555788999996533 22333333 222223334 55667775655554 4599999999887
Q ss_pred EEeee
Q 018593 325 KEMYS 329 (353)
Q Consensus 325 ~~v~~ 329 (353)
.....
T Consensus 263 ~~~~~ 267 (304)
T 2ynn_A 263 EKTLN 267 (304)
T ss_dssp EEEEC
T ss_pred eeecc
Confidence 65543
No 127
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=73.06 E-value=49 Score=29.18 Aligned_cols=70 Identities=11% Similarity=0.072 Sum_probs=40.1
Q ss_pred EECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 250 ECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 250 ~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
..+|.+.+++..+..+.+|.+.. -..+..+.. ....+..+ .+..++..++.... +.+.+||+++++....
T Consensus 277 ~~~~~~l~~~~~d~~i~vwd~~~-----~~~~~~~~~--~~~~v~~~-~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 277 SGHGNIVVSGSYDNTLIVWDVAQ-----MKCLYILSG--HTDRIYST-IYDHERKRCISASMDTTIRIWDLENGELMYT 347 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTT-----TEEEEEECC--CSSCEEEE-EEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCC-----CcEEEEecC--CCCCEEEE-EEcCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 34566666666777899996532 223333322 22223334 55667775665554 4499999988765433
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=72.87 E-value=35 Score=27.41 Aligned_cols=183 Identities=13% Similarity=0.022 Sum_probs=90.7
Q ss_pred CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCC-Cc
Q 018593 105 EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSES-NR 183 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~-~~ 183 (353)
....+++||+.+++...+...... .. .+.+.+.. . .++... ...+.+++..+ +.
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~---------v~---~~~~spdg-~-~l~~~~-----------~~~i~~~d~~~~~~ 74 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPEL---------FE---APNWSPDG-K-YLLLNS-----------EGLLYRLSLAGDPS 74 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSC---------CE---EEEECTTS-S-EEEEEE-----------TTEEEEEESSSCCS
T ss_pred cceeEEEEeCCCCceeeeccCCcc---------eE---eeEECCCC-C-EEEEEc-----------CCeEEEEeCCCCCC
Confidence 456899999999887766543221 11 34554432 2 232221 33788999888 76
Q ss_pred EEEeeeccccceeeeeecCceEEEcce-EEeeecC---CCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEE-
Q 018593 184 WRKFVSVQDYYQFSIMNRNQVVFVNGA-LHWLTDS---CSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSV- 257 (353)
Q Consensus 184 W~~~~~~~~~~~~~~~~~~~~v~~~g~-ly~~~~~---~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~- 257 (353)
..... .. ............-+|. +++.... ...|..+|..+.....+..... ...+... +|+..+
T Consensus 75 ~~~~~---~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~ 145 (297)
T 2ojh_A 75 PEKVD---TG-FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP-----SYWHGWSPDGKSFTY 145 (297)
T ss_dssp CEECC---CT-TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS-----EEEEEECTTSSEEEE
T ss_pred ceEec---cc-cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC-----ccceEECCCCCEEEE
Confidence 66552 11 1000000111112343 3333311 1478888887766444422211 1222333 465444
Q ss_pred EEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--C--cEEEEECCCCeEEEee
Q 018593 258 IEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--K--QVLVYHRNGRLWKEMY 328 (353)
Q Consensus 258 v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~--~~~~yd~~~~~~~~v~ 328 (353)
....+..+.||.++... ..... +.. .......+ .+..++..+++... + .++.+++.+++...+.
T Consensus 146 ~~~~~~~~~l~~~~~~~-~~~~~---~~~--~~~~~~~~-~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 146 CGIRDQVFDIYSMDIDS-GVETR---LTH--GEGRNDGP-DYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp EEEETTEEEEEEEETTT-CCEEE---CCC--SSSCEEEE-EECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred EECCCCceEEEEEECCC-CcceE---ccc--CCCccccc-eECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 44466778999885432 22221 111 11112233 45567775555542 2 2777777777776663
No 129
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=72.54 E-value=66 Score=30.92 Aligned_cols=105 Identities=10% Similarity=0.138 Sum_probs=58.7
Q ss_pred EEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccc-
Q 018593 211 LHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCI- 289 (353)
Q Consensus 211 ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~- 289 (353)
..|++... .+..||..+++|.. |.......-..+...+|.|.+.+.. .+..++. ...+........ ...
T Consensus 75 ~lWigT~~-Gl~~yd~~~~~f~~---~~~~~~~~i~~i~~~~g~lWigt~~----Gl~~~~~-~~~~~~~~~~~~-~~l~ 144 (758)
T 3ott_A 75 YLYMGTDN-GILVYNYRADRYEQ---PETDFPTDVRTMALQGDTLWLGALN----GLYTYQL-QSRKLTSFDTRR-NGLP 144 (758)
T ss_dssp EEEEEETT-EEEEEETTTTEECC---CSCCCCSCEEEEEEETTEEEEEETT----EEEEEET-TTCCEEEECHHH-HCCS
T ss_pred cEEEEeCC-CeEEEeCCCCEEEC---cccCCCceEEEEEecCCcEEEEcCC----cceeEeC-CCCeEEEeccCC-CCcC
Confidence 44565554 89999999998864 2111110122344567888876532 3455533 224444321111 111
Q ss_pred cCccceeeeeecCCcEEEEEeCCcEEEEECCCCeEEEe
Q 018593 290 KGMVPSIFPISQTREYVFLATHKQVLVYHRNGRLWKEM 327 (353)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~~~v 327 (353)
...+..+ ..+.+|. +.+.+.+.++.||+++++++.+
T Consensus 145 ~~~i~~i-~~d~~g~-lWigt~~Gl~~~~~~~~~~~~~ 180 (758)
T 3ott_A 145 NNTIYSI-IRTKDNQ-IYVGTYNGLCRYIPSNGKFEGI 180 (758)
T ss_dssp CSCEEEE-EECTTCC-EEEEETTEEEEEETTTTEEEEE
T ss_pred CCeEEEE-EEcCCCC-EEEEeCCCHhhCccCCCceEEe
Confidence 1112223 4455677 7788877899999999988754
No 130
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=72.23 E-value=46 Score=28.44 Aligned_cols=195 Identities=15% Similarity=0.036 Sum_probs=87.6
Q ss_pred CCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCc
Q 018593 104 PEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNR 183 (353)
Q Consensus 104 ~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~ 183 (353)
...+.+.+||..+++....-..... .. .+.+.+....-+.++.+. ....+.+|+..++.
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~~~~~~~---------~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEET---------VY---SHHMSPVSTKHCLVAVGT---------RGPKVQLCDLKSGS 177 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSC---------EE---EEEECSSCSSCCEEEEEE---------SSSSEEEEESSSSC
T ss_pred eCCCeEEEeeCCCCccceeccCCCc---------ee---eeEeecCCCCCcEEEEEc---------CCCeEEEEeCCCcc
Confidence 3567899999988876554332221 11 333444333323333321 13467888887653
Q ss_pred EEEe-eeccccceeeeeecCceEEEcce-EEeeecCCCEEEEEECCCceEEEeeCCCC-----------CCCC-Cc-eeE
Q 018593 184 WRKF-VSVQDYYQFSIMNRNQVVFVNGA-LHWLTDSCSFILALDLEGDVWRKISLPDK-----------VGSE-SR-SYL 248 (353)
Q Consensus 184 W~~~-~~~~~~~~~~~~~~~~~v~~~g~-ly~~~~~~~~i~~~D~~~~~~~~~~~P~~-----------~~~~-~~-~~l 248 (353)
-... ...... -...... -+|. +...+.....|..+|+.+..-....+... .... .. ..+
T Consensus 178 ~~~~~~~~~~~-v~~~~~~-----~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 178 CSHILQGHRQE-ILAVSWS-----PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp CCEEECCCCSC-EEEEEEC-----SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred eeeeecCCCCc-EEEEEEC-----CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 2111 000000 0111111 1232 33334333478889987654211111000 0000 11 223
Q ss_pred EEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCcEEEEECCCCeEEEe
Q 018593 249 LEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGRLWKEM 327 (353)
Q Consensus 249 ~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~~~v 327 (353)
... +|+..+++..+..+.+|.+..... ............... ..........+.+++...++.+.+||+++++....
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~ 329 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGEN-TLVNYGKVCNNSKKG-LKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITM 329 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCB-CCCCCCCCCCCCSSC-CCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEE
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCcc-ceecccccccccccc-ceeEEecCCCceEEEEecCCEEEEEECcCCcceee
Confidence 333 466666666777899997744221 000000000000111 11110223355655566667799999988765543
No 131
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=71.16 E-value=40 Score=27.29 Aligned_cols=192 Identities=8% Similarity=0.002 Sum_probs=95.0
Q ss_pred eeecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCC
Q 018593 91 RASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDG 170 (353)
Q Consensus 91 ~~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 170 (353)
++..+|.+++.. .....+.++++.++....+-..... .. .++.+|+..+ +++.. +..
T Consensus 43 ~d~~~~~ly~~d-~~~~~I~~~~~~g~~~~~~~~~~~~--------~p---~~ia~d~~~~--~lyv~---------d~~ 99 (267)
T 1npe_A 43 FDCVDKVVYWTD-ISEPSIGRASLHGGEPTTIIRQDLG--------SP---EGIALDHLGR--TIFWT---------DSQ 99 (267)
T ss_dssp EETTTTEEEEEE-TTTTEEEEEESSSCCCEEEECTTCC--------CE---EEEEEETTTT--EEEEE---------ETT
T ss_pred EecCCCEEEEEE-CCCCEEEEEecCCCCcEEEEECCCC--------Cc---cEEEEEecCC--eEEEE---------ECC
Confidence 344567777765 4456888888877654333211100 11 1666766432 34433 122
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecC--CCEEEEEECCCceEEEee-CCCCCCCCC
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDS--CSFILALDLEGDVWRKIS-LPDKVGSES 244 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~--~~~i~~~D~~~~~~~~~~-~P~~~~~~~ 244 (353)
...+.+++.....-+.... ... .....+.+ +|.+||.... ...|.++++....-..+. .+.. .
T Consensus 100 ~~~I~~~~~~g~~~~~~~~-~~~------~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~----~ 168 (267)
T 1npe_A 100 LDRIEVAKMDGTQRRVLFD-TGL------VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLG----L 168 (267)
T ss_dssp TTEEEEEETTSCSCEEEEC-SSC------SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCS----C
T ss_pred CCEEEEEEcCCCCEEEEEE-CCC------CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCC----C
Confidence 4577788875433222210 010 01123333 5889998764 247889998765544432 2111 2
Q ss_pred ceeEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--CcEEEEECC
Q 018593 245 RSYLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRN 320 (353)
Q Consensus 245 ~~~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~ 320 (353)
...++.. +++||++......+.+. +- +.. .....+.. ...|. ++..+++.+++... +.+..+|++
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~--~~-~g~--~~~~~~~~-----~~~P~-gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECL--NP-AQP--GRRKVLEG-----LQYPF-AVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEE--ET-TEE--EEEEEEEC-----CCSEE-EEEEETTEEEEEETTTTEEEEEETT
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEE--ec-CCC--ceEEEecC-----CCCce-EEEEeCCEEEEEECCCCeEEEEeCC
Confidence 2334443 46888877655554444 22 211 11111111 11222 22222333666543 459999999
Q ss_pred CCeEEEe
Q 018593 321 GRLWKEM 327 (353)
Q Consensus 321 ~~~~~~v 327 (353)
+++....
T Consensus 238 ~g~~~~~ 244 (267)
T 1npe_A 238 ISKEMDT 244 (267)
T ss_dssp TTEEEEE
T ss_pred CCCceEE
Confidence 8876544
No 132
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=71.13 E-value=42 Score=28.65 Aligned_cols=66 Identities=11% Similarity=0.093 Sum_probs=39.0
Q ss_pred EEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 258 IEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 258 v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
++..+..+.||.++..+ ..... .....++...+..+ .+..+|..++.... +.+.+||+++++....
T Consensus 98 ~~s~dg~v~lWd~~~~~-~~~~~--~~~~~~H~~~V~~v-~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 98 VASDSGAVELWELDENE-TLIVS--KFCKYEHDDIVSTV-SVLSSGTQAVSGSKDICIKVWDLAQQVVLSS 164 (344)
T ss_dssp EEETTSEEEEEEECTTS-SCEEE--EEEEECCSSCEEEE-EECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEECCCEEEEEeccCCC-ceeEe--eccccCCCCCEEEE-EECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 44467789999885532 22222 22222333334445 56678886666654 4499999999876544
No 133
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=69.80 E-value=49 Score=27.85 Aligned_cols=141 Identities=10% Similarity=0.020 Sum_probs=68.8
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEE--EcceEEeeecCCCEEEEEECCCceEEEeeCCC-CCCCCCcee
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVF--VNGALHWLTDSCSFILALDLEGDVWRKISLPD-KVGSESRSY 247 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~--~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~-~~~~~~~~~ 247 (353)
...+.+||.+++.-......... . .-..+. -+|.+...+..+..|..+|+.+.+-....+.. +.. .-..
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~--~----~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~--~v~~ 219 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSD--V----EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA--KIKE 219 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSS--C----CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS--CEEE
T ss_pred CCcEEEEECCCCcEEEEEecCCC--C----ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC--CEEE
Confidence 44678899887754322100000 0 011122 24666666555568999999887633112222 110 1223
Q ss_pred EEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc---ccccCccceeeeeecCCcEEEEEe--CCcEEEEEC--
Q 018593 248 LLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL---RCIKGMVPSIFPISQTREYVFLAT--HKQVLVYHR-- 319 (353)
Q Consensus 248 l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~---~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~yd~-- 319 (353)
+.-. +|...+.+.++ .+.+|.+..... ...+.. .........+ .+..+|..++... ++.+.+||.
T Consensus 220 l~fs~~g~~l~s~~~~-~v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 220 VKFADNGYWMVVECDQ-TVVCFDLRKDVG-----TLAYPTYTIPEFKTGTVTY-DIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EEECTTSSEEEEEESS-BEEEEETTSSTT-----CBSSCCCBC-----CCEEE-EECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEeCCCCEEEEEeCC-eEEEEEcCCCCc-----ceeecccccccccccceEE-EECCCCCEEEEecCCCCcEEEEEEcc
Confidence 3333 45555555544 999997644221 111111 0011000124 6677888666644 445777776
Q ss_pred CCCeEEE
Q 018593 320 NGRLWKE 326 (353)
Q Consensus 320 ~~~~~~~ 326 (353)
.++.|+.
T Consensus 293 ~~~~~~~ 299 (343)
T 3lrv_A 293 KTKNWTK 299 (343)
T ss_dssp TTCSEEE
T ss_pred cccceEe
Confidence 5567886
No 134
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=69.38 E-value=51 Score=28.80 Aligned_cols=89 Identities=10% Similarity=0.121 Sum_probs=50.3
Q ss_pred EEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC
Q 018593 232 RKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH 311 (353)
Q Consensus 232 ~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~ 311 (353)
..++.|....+-+...|.-+.+.+..++ .+..+.||..+ +++-..... ..+....+..+ .+..+|..++.+..
T Consensus 95 ~~l~ap~~~~d~y~~~l~wS~~n~lAvg-ld~tV~lWd~~---tg~~~~~~~--~~~~~~~V~sv-~fspdg~~lasgs~ 167 (420)
T 4gga_A 95 RILDAPEIRNDYYLNLVDWSSGNVLAVA-LDNSVYLWSAS---SGDILQLLQ--MEQPGEYISSV-AWIKEGNYLAVGTS 167 (420)
T ss_dssp EEEECTTCCCCTTCBCEEECTTSEEEEE-ETTEEEEEETT---TCCEEEEEE--CCSTTCCEEEE-EECTTSSEEEEEET
T ss_pred eEEECCCCcccccceeEEECCCCEEEEE-eCCEEEEEECC---CCCEEEEEE--ecCCCCcEEEE-EECCCCCEEEEEEC
Confidence 4446776654422233344445554444 36789999543 344333333 32233334445 66778886766654
Q ss_pred -CcEEEEECCCCeEEEe
Q 018593 312 -KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 312 -~~~~~yd~~~~~~~~v 327 (353)
+.+.+||+++++....
T Consensus 168 Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 168 SAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TSCEEEEETTTTEEEEE
T ss_pred CCeEEEEEcCCCcEEEE
Confidence 4499999999876543
No 135
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=69.34 E-value=79 Score=30.00 Aligned_cols=144 Identities=15% Similarity=0.079 Sum_probs=78.2
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecC---CCEEEEEECCCce---EEEeeCCCCCCCCC
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDS---CSFILALDLEGDV---WRKISLPDKVGSES 244 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~---~~~i~~~D~~~~~---~~~~~~P~~~~~~~ 244 (353)
...+.+.+..++.|+........ . ...+..+|.+|+.+.. ...|..+|+.+.. |..+..+.... .
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~-~------~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~ 321 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGA-K------YEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA--S 321 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSC-C------EEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC--E
T ss_pred ceEEEEEcCCCCceEEeecCCCc-e------EEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC--e
Confidence 44556666667778777322111 0 1123345667776652 2589999997754 66653332110 1
Q ss_pred ceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe-C----CcEEEEEC
Q 018593 245 RSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT-H----KQVLVYHR 319 (353)
Q Consensus 245 ~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~----~~~~~yd~ 319 (353)
-..+...+|+|++....+....||.++-.+ . ....+..+.. ..+..+ ....++..+++.. . +.++.||+
T Consensus 322 l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g-~---~~~~l~~~~~-~~v~~~-~~s~d~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 322 LLSVSIVGGHLSLEYLKDATSEVRVATLKG-K---PVRTVQLPGV-GAASNL-MGLEDLDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEETTC-C---EEEECCCSSS-SEECCC-BSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred EEEEEEECCEEEEEEEECCEEEEEEEeCCC-C---eeEEecCCCC-eEEEEe-ecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 122344588888777777788899886322 2 2334443211 111222 3334554444432 2 34999999
Q ss_pred CCCeEEEeee
Q 018593 320 NGRLWKEMYS 329 (353)
Q Consensus 320 ~~~~~~~v~~ 329 (353)
++++.+.+..
T Consensus 396 ~~g~~~~l~~ 405 (695)
T 2bkl_A 396 STGKSELWAK 405 (695)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEec
Confidence 9998776643
No 136
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=68.48 E-value=50 Score=27.37 Aligned_cols=140 Identities=10% Similarity=-0.073 Sum_probs=79.4
Q ss_pred eEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCce-EEEeeCCCCCCCCCceeEEEE
Q 018593 173 KCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDV-WRKISLPDKVGSESRSYLLEC 251 (353)
Q Consensus 173 ~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~-~~~~~~P~~~~~~~~~~l~~~ 251 (353)
.+.++|.++++=.... .+.. ++ .......++.+|.+.-....+.+||..+.+ -..++.+.. ..-+..-
T Consensus 76 ~v~~iD~~Tgkv~~~~-l~~~-~F----geGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-----GwGLt~D 144 (268)
T 3nok_A 76 TLRQLSLESAQPVWME-RLGN-IF----AEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-----GWGLCYW 144 (268)
T ss_dssp EEEECCSSCSSCSEEE-ECTT-CC----EEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC-----CCCEEEE
T ss_pred EEEEEECCCCcEEeEE-CCCC-cc----eeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc-----eeEEecC
Confidence 3888898887432221 1111 11 111344567899887665799999999865 345565432 2344555
Q ss_pred CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc--cccC-ccceeeeeecCCcEEEEEeC--CcEEEEECCCCeEEE
Q 018593 252 DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR--CIKG-MVPSIFPISQTREYVFLATH--KQVLVYHRNGRLWKE 326 (353)
Q Consensus 252 ~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~--~~~~-~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~~~~~ 326 (353)
+++|++..+ .. .|+.+ |.++.+ .+.+|... +... ...-+ . ..+|. ++.... +.+...|++|++...
T Consensus 145 g~~L~vSdG-s~--~l~~i-Dp~T~~--v~~~I~V~~~g~~v~~lNeL-e-~~dG~-lyanvw~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 145 NGKLVRSDG-GT--MLTFH-EPDGFA--LVGAVQVKLRGQPVELINEL-E-CANGV-IYANIWHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp TTEEEEECS-SS--EEEEE-CTTTCC--EEEEEECEETTEECCCEEEE-E-EETTE-EEEEETTCSEEEEECTTTCBEEE
T ss_pred CCEEEEECC-CC--EEEEE-cCCCCe--EEEEEEeCCCCccccccccc-E-EeCCE-EEEEECCCCeEEEEeCCCCcEEE
Confidence 667777653 33 45555 333332 44555542 1111 11112 1 12676 777764 349999999999988
Q ss_pred eeeecc
Q 018593 327 MYSVKY 332 (353)
Q Consensus 327 v~~~~~ 332 (353)
.-++.+
T Consensus 216 ~Idl~~ 221 (268)
T 3nok_A 216 VIDASA 221 (268)
T ss_dssp EEECHH
T ss_pred EEECCC
Confidence 877753
No 137
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=67.69 E-value=56 Score=31.12 Aligned_cols=121 Identities=12% Similarity=0.075 Sum_probs=64.2
Q ss_pred CceEEEcceEEeeecCCCEEEEEECCCce--EEEee-CCCC-----CCCCCceeEEEECCEEEEEEecCCeEEEEEEec-
Q 018593 202 NQVVFVNGALHWLTDSCSFILALDLEGDV--WRKIS-LPDK-----VGSESRSYLLECDGCLSVIEISDEWMETWVLKD- 272 (353)
Q Consensus 202 ~~~v~~~g~ly~~~~~~~~i~~~D~~~~~--~~~~~-~P~~-----~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~- 272 (353)
..+++.+|.+|..+... .+.++|..+++ |+.-. .+.. +.......++..+|+|++... +.. +..++-
T Consensus 71 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-dg~--l~alD~~ 146 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS-VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-DGR--LIALDAA 146 (677)
T ss_dssp CCCEEETTEEEEECGGG-CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-TSE--EEEEETT
T ss_pred eCCEEECCEEEEECCCC-eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-CCE--EEEEECC
Confidence 34688999999988764 89999998764 66531 1110 000012334556777776543 233 334432
Q ss_pred CCCCCeEEEEeeccc-cccCccceeeeeecCCcEEEEEe-------CCcEEEEECCCCeEEEeeee
Q 018593 273 YYRDEWHSVDKVSLR-CIKGMVPSIFPISQTREYVFLAT-------HKQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 273 ~~~~~W~~~~~i~~~-~~~~~~~~~~~~~~~~~~v~~~~-------~~~~~~yd~~~~~~~~v~~~ 330 (353)
.++..|......... .......++ ..++. +++.. .+.++.||.+|++..+-...
T Consensus 147 tG~~~W~~~~~~~~~~~~~~~~~p~---v~~~~-v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 147 TGKEVWHQNTFEGQKGSLTITGAPR---VFKGK-VIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp TCCEEEEEETTTTCCSSCBCCSCCE---EETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCCEEeeecCCcCcCcCcccccCcE---EECCE-EEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 233557653110100 111111222 12454 55554 35599999999976655443
No 138
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=67.61 E-value=58 Score=27.79 Aligned_cols=102 Identities=9% Similarity=-0.055 Sum_probs=49.3
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CC-EEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DG-CLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g-~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
+.+...+.....|..+|+.+.+-... +..... .-..+... +| ++.+.+..+..+.||.+ ... ..+..+.
T Consensus 239 ~~~la~g~~d~~i~~wd~~~~~~~~~-~~~~~~--~v~~l~~sp~~~~~lasgs~D~~i~iwd~---~~~--~~~~~~~- 309 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKNPDSAQT-SAVHSQ--NITGLAYSYHSSPFLASISEDCTVAVLDA---DFS--EVFRDLS- 309 (357)
T ss_dssp TTEEEEEESSSCEEEEESSCGGGCEE-ECCCSS--CEEEEEECSSSSCCEEEEETTSCEEEECT---TSC--EEEEECC-
T ss_pred cceEEEeecccceeEEECCCCcEeEE-Eeccce--eEEEEEEcCCCCCEEEEEeCCCEEEEEEC---CCC--cEeEECC-
Confidence 44444444435788899887542211 111110 12233333 45 44444447788999943 222 2233232
Q ss_pred ccccCccceeeeee-cCCcEEEEEe-CCcEEEEECCCC
Q 018593 287 RCIKGMVPSIFPIS-QTREYVFLAT-HKQVLVYHRNGR 322 (353)
Q Consensus 287 ~~~~~~~~~~~~~~-~~~~~v~~~~-~~~~~~yd~~~~ 322 (353)
....+..+ .+. .++..++... ++.+.+||+.++
T Consensus 310 --H~~~V~~v-afsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 310 --HRDFVTGV-AWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp --CSSCEEEE-EECSSSTTEEEEEETTSCEEEEECC--
T ss_pred --CCCCEEEE-EEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 22223334 444 3677555554 355999998653
No 139
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=67.51 E-value=55 Score=27.50 Aligned_cols=165 Identities=10% Similarity=0.058 Sum_probs=83.8
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
+|.+++........+.++++..+....+........ ..........++.+|+..+ .+++. +....++
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~--~~~~~~~~p~gia~d~~~g--~l~v~---------d~~~~~I 220 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSS--PRPGQFSVPHSLALVPHLD--QLCVA---------DRENGRI 220 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSS--CCTTEESCEEEEEEETTTT--EEEEE---------ETTTTEE
T ss_pred CCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCC--CCCcccCCCcEEEEECCCC--EEEEE---------ECCCCEE
Confidence 788887752246788899964433333432111000 0000011112677776432 34333 2235689
Q ss_pred EEEEcCCCcEEEeeecccc--ceeeeee-cCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE
Q 018593 175 LVFDSESNRWRKFVSVQDY--YQFSIMN-RNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC 251 (353)
Q Consensus 175 ~vy~s~~~~W~~~~~~~~~--~~~~~~~-~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~ 251 (353)
.+|+..+++....-..+.. .+..... ....+..+|.+|........+..+|..+.+....--+..........+...
T Consensus 221 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 221 QCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp EEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred EEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence 9999987776443111100 0222211 122444466666554444589999988877654421111111022334443
Q ss_pred -CCEEEEEEecCCeEEEEEEec
Q 018593 252 -DGCLSVIEISDEWMETWVLKD 272 (353)
Q Consensus 252 -~g~L~~v~~~~~~~~vw~l~~ 272 (353)
+|.|++.......+.+|.++.
T Consensus 301 ~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 301 EDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TTSEEEEEESSSCCEEEEEEEE
T ss_pred CCCCEEEEECCCCEEEEEeCCc
Confidence 478888877777888887754
No 140
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=67.38 E-value=66 Score=28.37 Aligned_cols=115 Identities=10% Similarity=0.051 Sum_probs=62.0
Q ss_pred cceEEeeecCCCEEEEEECCCceE-EEeeCCCC---------------------CCCCCceeEEEE-CCEEEEEEe-cCC
Q 018593 208 NGALHWLTDSCSFILALDLEGDVW-RKISLPDK---------------------VGSESRSYLLEC-DGCLSVIEI-SDE 263 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~-~~~~~P~~---------------------~~~~~~~~l~~~-~g~L~~v~~-~~~ 263 (353)
+|.+...+..+..|..+|+.+.+. ..+..... .....-..+... +|+..++.. ...
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~ 330 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATK 330 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCC
Confidence 565555554445899999988763 22332110 000011223333 366666666 788
Q ss_pred eEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC----------cEEEEECCCCeEEEe
Q 018593 264 WMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK----------QVLVYHRNGRLWKEM 327 (353)
Q Consensus 264 ~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~----------~~~~yd~~~~~~~~v 327 (353)
.+.||.+.+.....+..+..+... ..+..+ .+.. +.+++..... .++.+|.++++|+..
T Consensus 331 ~i~iw~~~~~~~~~l~~~~~~~~~---~~v~~~-~~~~-~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~ 399 (450)
T 2vdu_B 331 CIIILEMSEKQKGDLALKQIITFP---YNVISL-SAHN-DEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVVN 399 (450)
T ss_dssp EEEEEEECSSSTTCEEEEEEEECS---SCEEEE-EEET-TEEEEEECCTTCCSSCCCSEEEEEEETTTTEEEEC
T ss_pred eEEEEEeccCCCCceeeccEeccC---CceEEE-EecC-CcEEEEEecccCCCCCCcceEEEEEEcCCCeEEEc
Confidence 999999832222566666666643 112233 4444 3433333221 488888899998643
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=67.37 E-value=47 Score=26.63 Aligned_cols=200 Identities=10% Similarity=0.006 Sum_probs=94.7
Q ss_pred ecCeeEEeeecCCCceEEEEcccc-cceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMT-REWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t-~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
+.+|-.++.. ....+++||..+ ++...+...... .... .+.+.+. +-.++... ...+..
T Consensus 50 spdg~~l~~~--~~~~i~~~d~~~~~~~~~~~~~~~~-------~~~~---~~~~spd--g~~l~~~~------~~~~~~ 109 (297)
T 2ojh_A 50 SPDGKYLLLN--SEGLLYRLSLAGDPSPEKVDTGFAT-------ICNN---DHGISPD--GALYAISD------KVEFGK 109 (297)
T ss_dssp CTTSSEEEEE--ETTEEEEEESSSCCSCEECCCTTCC-------CBCS---CCEECTT--SSEEEEEE------CTTTSS
T ss_pred CCCCCEEEEE--cCCeEEEEeCCCCCCceEecccccc-------cccc---ceEECCC--CCEEEEEE------eCCCCc
Confidence 3345444332 356899999999 877766543311 0111 2333332 22333321 012235
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcce-EEeeecCCC--EEEEEECCCceEEEeeCCCCCCCCCceeE
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGA-LHWLTDSCS--FILALDLEGDVWRKISLPDKVGSESRSYL 248 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~-ly~~~~~~~--~i~~~D~~~~~~~~~~~P~~~~~~~~~~l 248 (353)
..+.+++..++.-+....... ....... -+|. +++.+.... .+..+|..+.....+..... ....+
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~~--~~~~~~s-----pdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~ 178 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTKNLP--SYWHGWS-----PDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG----RNDGP 178 (297)
T ss_dssp CEEEEEETTCCCCEECCSSSS--EEEEEEC-----TTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS----CEEEE
T ss_pred ceEEEEECCCCceEEeecCCC--ccceEEC-----CCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC----ccccc
Confidence 667777777666444421110 1111111 1333 443332222 45555666665544422111 12233
Q ss_pred EEE-CCEEEEEEe-cCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC------------CcE
Q 018593 249 LEC-DGCLSVIEI-SDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH------------KQV 314 (353)
Q Consensus 249 ~~~-~g~L~~v~~-~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~------------~~~ 314 (353)
... +|+..++.. ......||.++..+ ... ..+... ......+ .+..+|+.+++... ..+
T Consensus 179 ~~s~dg~~l~~~~~~~~~~~i~~~~~~~-~~~---~~~~~~--~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 179 DYSPDGRWIYFNSSRTGQMQIWRVRVDG-SSV---ERITDS--AYGDWFP-HPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTS-SCE---EECCCC--SEEEEEE-EECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred eECCCCCEEEEEecCCCCccEEEECCCC-CCc---EEEecC--CcccCCe-EECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 333 466544444 56788999886332 222 122211 1112223 45567775555433 349
Q ss_pred EEEECCCCeEEEeeee
Q 018593 315 LVYHRNGRLWKEMYSV 330 (353)
Q Consensus 315 ~~yd~~~~~~~~v~~~ 330 (353)
+.||+++++.+.+...
T Consensus 252 ~~~d~~~~~~~~~~~~ 267 (297)
T 2ojh_A 252 QLMDMDGGNVETLFDL 267 (297)
T ss_dssp EEEETTSCSCEEEEEE
T ss_pred EEEecCCCCceeeecc
Confidence 9999999988777654
No 142
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=66.94 E-value=60 Score=27.70 Aligned_cols=117 Identities=13% Similarity=-0.017 Sum_probs=60.2
Q ss_pred eEEeeecCCCEEEEEECCCce------EEEeeCCCCC-CCCCceeEEEE-----CCEE-EEEEecCCeEEEEEEec----
Q 018593 210 ALHWLTDSCSFILALDLEGDV------WRKISLPDKV-GSESRSYLLEC-----DGCL-SVIEISDEWMETWVLKD---- 272 (353)
Q Consensus 210 ~ly~~~~~~~~i~~~D~~~~~------~~~~~~P~~~-~~~~~~~l~~~-----~g~L-~~v~~~~~~~~vw~l~~---- 272 (353)
.+...+.....|..+|+.+.. +..+...... ....-..+... +|.. .+++..+..+.+|.+..
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 333333333478888877665 5555322100 00022333434 4666 55555778999999976
Q ss_pred --CCCCCeEEEEeecc-----ccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEee
Q 018593 273 --YYRDEWHSVDKVSL-----RCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEMY 328 (353)
Q Consensus 273 --~~~~~W~~~~~i~~-----~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v~ 328 (353)
.....|.....+.. ......+..+ .+..++ .++.... +.+.+||+++++.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSV-DISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEE-EECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEE-EECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 33234444333321 1112223334 455566 5555544 44999999988655443
No 143
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=66.53 E-value=15 Score=31.44 Aligned_cols=109 Identities=8% Similarity=0.034 Sum_probs=54.2
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
+|.+...+..+..|..+|+.++.|..+ .+..... .-..+... +|++.+.+..+..+.+|.++... .|.....+.
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~--~~~~~~~~~ 97 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDK--IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG--TWKQTLVLL 97 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSS--CEEEEEECTTTCCEEEEETTSSEEEC--------CCCCEEECC
T ss_pred CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCc--eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC--ceeeeeEec
Confidence 355444443335788899988877665 3433221 12233333 36666665677889999775421 244433332
Q ss_pred cccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCe
Q 018593 286 LRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
. ....+..+ .+..++..++.... +.+.+||+++++
T Consensus 98 ~--~~~~v~~~-~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 98 R--LNRAATFV-RWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp C--CSSCEEEE-ECCTTSSCCEEEESSSCEEECCC----
T ss_pred c--cCCceEEE-EECCCCCEEEEEecCCeEEEEEECCcc
Confidence 1 22222333 44556665555544 458899998875
No 144
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=66.34 E-value=54 Score=26.98 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=59.7
Q ss_pred ceEEeeecCCCEEEEEECCCc--eEEEe-eCCCCCCCCCceeEEEE---CCEEEEEEecCCeEEEEEEecCCC----CCe
Q 018593 209 GALHWLTDSCSFILALDLEGD--VWRKI-SLPDKVGSESRSYLLEC---DGCLSVIEISDEWMETWVLKDYYR----DEW 278 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~--~~~~~-~~P~~~~~~~~~~l~~~---~g~L~~v~~~~~~~~vw~l~~~~~----~~W 278 (353)
|.+...+..+..|..+|+.++ .+..+ .+..... .-..+... +|++.+.+..+..+.+|.++.... ..|
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 23 GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDS--SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSS--CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCC--cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence 433333333347888887754 23333 2222211 12233333 367777666778999999965421 466
Q ss_pred EEEEeeccccccCccceeeeeecC--CcEEEEEeC-CcEEEEECCCCe
Q 018593 279 HSVDKVSLRCIKGMVPSIFPISQT--REYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 279 ~~~~~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
.....+.. ....+..+ .+..+ +..++.... +.+.+||+++++
T Consensus 101 ~~~~~~~~--~~~~v~~~-~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 101 NKLCTLND--SKGSLYSV-KFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEEEEECC--CSSCEEEE-EECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred ceeeeecc--cCCceeEE-EEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 66665553 12222333 44444 665555554 459999998765
No 145
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=64.76 E-value=73 Score=27.92 Aligned_cols=184 Identities=7% Similarity=-0.007 Sum_probs=94.2
Q ss_pred ceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEE
Q 018593 107 GVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRK 186 (353)
Q Consensus 107 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~ 186 (353)
..+.+||..+++...+...... .. ...+.+.. -+++.... +.+...+.+++..+++-+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~---------v~---~~~~Spdg--~~la~~s~-------~~~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQP---------LM---SPAWSPDG--SKLAYVTF-------ESGRSALVIQTLANGAVRQ 217 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSC---------EE---EEEECTTS--SEEEEEEC-------TTSSCEEEEEETTTCCEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCc---------ce---eeEEcCCC--CEEEEEEe-------cCCCcEEEEEECCCCcEEE
Confidence 6899999877665555432211 11 44554432 23444321 2234688899999887765
Q ss_pred eeeccccceeeeeecCceEEEcce-EEeeecCC--CEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEe-c
Q 018593 187 FVSVQDYYQFSIMNRNQVVFVNGA-LHWLTDSC--SFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEI-S 261 (353)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~v~~~g~-ly~~~~~~--~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~-~ 261 (353)
....... ....... -+|. |++..... ..|..+|+.+.+...+.-... ....+.-+ +|+..++.. .
T Consensus 218 l~~~~~~-~~~~~~s-----pdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 218 VASFPRH-NGAPAFS-----PDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS----NNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp EECCSSC-EEEEEEC-----TTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS----CEEEEEECTTSSEEEEEECT
T ss_pred eecCCCc-ccCEEEc-----CCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC----cccceEECCCCCEEEEEECC
Confidence 5221111 1111111 1454 55444322 468899999887654421111 12223333 466444444 4
Q ss_pred CCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC----CcEEEEECCCCeEEEee
Q 018593 262 DEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH----KQVLVYHRNGRLWKEMY 328 (353)
Q Consensus 262 ~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~~yd~~~~~~~~v~ 328 (353)
+....||.++-.+ .+- ..+... ......+ .+..+|+.+++... ..+..+|+++++.+.+.
T Consensus 288 ~g~~~i~~~d~~~-~~~---~~l~~~--~~~~~~~-~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 288 AGRPQVYKVNING-GAP---QRITWE--GSQNQDA-DVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp TSSCEEEEEETTS-SCC---EECCCS--SSEEEEE-EECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred CCCcEEEEEECCC-CCE---EEEecC--CCcccCe-EECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 4555677664332 221 112211 1112223 45667776665543 24999999999887653
No 146
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=64.71 E-value=48 Score=27.94 Aligned_cols=72 Identities=11% Similarity=0.136 Sum_probs=41.1
Q ss_pred CCEEEEEEecCCeEEEEEEecCCCC-CeEE-EEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEE
Q 018593 252 DGCLSVIEISDEWMETWVLKDYYRD-EWHS-VDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKE 326 (353)
Q Consensus 252 ~g~L~~v~~~~~~~~vw~l~~~~~~-~W~~-~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~ 326 (353)
+|++.+.+..+..+.+|.+...+.. .... ...+ .+....+..+ .+..++.+++.... +.+.+||+++++...
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l--~~h~~~V~~~-~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~ 112 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKAL--TGHNHFVSDL-ALSQENCFAISSSWDKTLRLWDLRTGTTYK 112 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEE--CCCSSCEEEE-EECSSTTEEEEEETTSEEEEEETTSSCEEE
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchh--ccCCCceEEE-EECCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 5666666667789999988653321 1111 1111 2233333344 55667775555554 449999999876543
No 147
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=64.71 E-value=72 Score=30.30 Aligned_cols=120 Identities=11% Similarity=0.055 Sum_probs=63.9
Q ss_pred CceEEEcceEEeeecCCCEEEEEECCCc--eEEEe-eCCCCC-----CCCCceeEEEECCEEEEEEecCCeEEEEEEec-
Q 018593 202 NQVVFVNGALHWLTDSCSFILALDLEGD--VWRKI-SLPDKV-----GSESRSYLLECDGCLSVIEISDEWMETWVLKD- 272 (353)
Q Consensus 202 ~~~v~~~g~ly~~~~~~~~i~~~D~~~~--~~~~~-~~P~~~-----~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~- 272 (353)
..+++.+|.+|..+... .+.++|..++ .|+.- ..+... .......++..+|+|++... +.. +..++-
T Consensus 60 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg~--l~alD~~ 135 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS-RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-DGR--LIALDAK 135 (668)
T ss_dssp CCCEEETTEEEEEEGGG-EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-TSE--EEEEETT
T ss_pred cCCEEECCEEEEECCCC-eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-CCE--EEEEECC
Confidence 34678999999988765 8999998775 47653 222110 00012234456777766543 223 444432
Q ss_pred CCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-------CcEEEEECCCCeEEEeee
Q 018593 273 YYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-------KQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 273 ~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~yd~~~~~~~~v~~ 329 (353)
.++..|.....-+.........++ ..++. +++... +.++.||.+|++..+-..
T Consensus 136 tG~~~W~~~~~~~~~~~~~~~~P~---v~~~~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 136 TGKAIWSQQTTDPAKPYSITGAPR---VVKGK-VIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp TCCEEEEEECSCTTSSCBCCSCCE---EETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCEeeeeccCCCCCcceecCCCE---EECCE-EEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 233567764211101111111222 12454 555532 459999999987666544
No 148
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=64.05 E-value=69 Score=27.41 Aligned_cols=188 Identities=7% Similarity=-0.051 Sum_probs=89.7
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
+|.++.. .....+.+||..+++....-.... .... .+.+.+... .++..+ ....+
T Consensus 217 ~~~~~~~--~~~g~i~~~d~~~~~~~~~~~~~~--------~~i~---~~~~~~~~~--~l~~~~----------~d~~i 271 (425)
T 1r5m_A 217 DDKFVIP--GPKGAIFVYQITEKTPTGKLIGHH--------GPIS---VLEFNDTNK--LLLSAS----------DDGTL 271 (425)
T ss_dssp TTEEEEE--CGGGCEEEEETTCSSCSEEECCCS--------SCEE---EEEEETTTT--EEEEEE----------TTSCE
T ss_pred CCEEEEE--cCCCeEEEEEcCCCceeeeeccCC--------CceE---EEEECCCCC--EEEEEc----------CCCEE
Confidence 4555444 456788999988875443211111 1122 455555332 233221 13467
Q ss_pred EEEEcCCCcEEEe-eeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-
Q 018593 175 LVFDSESNRWRKF-VSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC- 251 (353)
Q Consensus 175 ~vy~s~~~~W~~~-~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~- 251 (353)
.+|+..++.-... ...... ..... ..-+| ....+.....|..||+.+.+.... ..... .-..+...
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~-i~~~~-----~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~ 340 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYGHSQS-IVSAS-----WVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV----PIFAGRISQ 340 (425)
T ss_dssp EEECSSSBSCSEEECCCSSC-EEEEE-----EETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC----CEEEEEECT
T ss_pred EEEECCCCccceEecCCCcc-EEEEE-----ECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc----cEEEEEEcC
Confidence 7888776532111 000000 01111 11145 333333335899999988764333 22111 11223333
Q ss_pred CCEEEEEEecCCeEEEEEEecCCC----------CCeE-----EEEeeccccccC--ccceeeeeecCCcEEEEEeC-Cc
Q 018593 252 DGCLSVIEISDEWMETWVLKDYYR----------DEWH-----SVDKVSLRCIKG--MVPSIFPISQTREYVFLATH-KQ 313 (353)
Q Consensus 252 ~g~L~~v~~~~~~~~vw~l~~~~~----------~~W~-----~~~~i~~~~~~~--~~~~~~~~~~~~~~v~~~~~-~~ 313 (353)
+|++.+++..+..+.+|.++.... ..|. .+..+.. ... .+..+ .+..++..++.... +.
T Consensus 341 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~-~~s~~~~~l~~~~~dg~ 417 (425)
T 1r5m_A 341 DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS--SQDNDYIFDL-SWNCAGNKISVAYSLQE 417 (425)
T ss_dssp TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECC--TTCCCCEEEE-EECTTSSEEEEEESSSC
T ss_pred CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcC--cccCCceEEE-EccCCCceEEEEecCce
Confidence 467666666778899998754320 1111 2222221 111 23344 56667775655554 44
Q ss_pred EEEEECCC
Q 018593 314 VLVYHRNG 321 (353)
Q Consensus 314 ~~~yd~~~ 321 (353)
+.+||++.
T Consensus 418 i~iw~~~g 425 (425)
T 1r5m_A 418 GSVVAIPG 425 (425)
T ss_dssp CEEEECCC
T ss_pred EEEEeecC
Confidence 88998763
No 149
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=63.81 E-value=74 Score=27.69 Aligned_cols=145 Identities=13% Similarity=0.091 Sum_probs=74.6
Q ss_pred eecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 92 ASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 92 ~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
+..+|.|++.. ....+++.+++.++....+...... ... ++.+|+..+ +++.. +...
T Consensus 124 d~~~~~ly~~D-~~~~~I~r~~~~g~~~~~~~~~~~~--------~p~---glavd~~~g--~lY~~---------d~~~ 180 (386)
T 3v65_B 124 HHRRELVFWSD-VTLDRILRANLNGSNVEEVVSTGLE--------SPG---GLAVDWVHD--KLYWT---------DSGT 180 (386)
T ss_dssp ETTTTEEEEEE-TTTTEEEEEETTSCCEEEEECSSCS--------CCC---CEEEETTTT--EEEEE---------ETTT
T ss_pred ecCCCeEEEEe-CCCCcEEEEecCCCCcEEEEeCCCC--------Ccc---EEEEEeCCC--eEEEE---------cCCC
Confidence 34567777765 4456788888877654443221111 011 566665433 34333 1223
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCC-CEEEEEECCCceEEEeeCCCCCCCCCcee
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSC-SFILALDLEGDVWRKISLPDKVGSESRSY 247 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~-~~i~~~D~~~~~~~~~~~P~~~~~~~~~~ 247 (353)
..+++++.....-+.... ..+ ....++.+ +|.|||..... ..|.++|+....-..+--.... ...-
T Consensus 181 ~~I~~~~~dg~~~~~l~~-~~l------~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~---~PnG 250 (386)
T 3v65_B 181 SRIEVANLDGAHRKVLLW-QSL------EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLF---WPNG 250 (386)
T ss_dssp TEEEECBTTSCSCEEEEC-SSC------SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS---CEEE
T ss_pred CeEEEEeCCCCceEEeec-CCC------CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCC---Ceee
Confidence 466677765433222210 111 01113333 58999997654 6899999987544433111111 2234
Q ss_pred EEEE--CCEEEEEEecCCeEEEEEEe
Q 018593 248 LLEC--DGCLSVIEISDEWMETWVLK 271 (353)
Q Consensus 248 l~~~--~g~L~~v~~~~~~~~vw~l~ 271 (353)
|+.. +|+||++...... |+.++
T Consensus 251 lavd~~~~~lY~aD~~~~~--I~~~d 274 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKHHV--IERAN 274 (386)
T ss_dssp EEEEGGGTEEEEEETTTTE--EEEEC
T ss_pred EEEeCCCCEEEEEECCCCE--EEEEe
Confidence 4543 6899998765554 44443
No 150
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=63.29 E-value=49 Score=27.45 Aligned_cols=75 Identities=12% Similarity=0.195 Sum_probs=36.6
Q ss_pred ceEEEEEcC-CCcEEEeeeccccceeeeeecCceEEE-cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEE
Q 018593 172 FKCLVFDSE-SNRWRKFVSVQDYYQFSIMNRNQVVFV-NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLL 249 (353)
Q Consensus 172 ~~~~vy~s~-~~~W~~~~~~~~~~~~~~~~~~~~v~~-~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~ 249 (353)
..+..|+.. ...|+.. ... + .....+.. +|.+|.-+.. ..+.+||...+.......+... ...+.
T Consensus 117 ~~l~~~d~~g~~~~~~~---~~~-~----~~~~~~~~~~g~l~vgt~~-~~l~~~d~~g~~~~~~~~~~~~----~~~~~ 183 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFK---TKK-A----IYATPIVSEDGTIYVGSND-NYLYAINPDGTEKWRFKTNDAI----TSAAS 183 (330)
T ss_dssp SEEEEECTTSCEEEEEE---CSS-C----CCSCCEECTTSCEEEECTT-SEEEEECTTSCEEEEEECSSCC----CSCCE
T ss_pred CEEEEEcCCCCEEEEEc---CCC-c----eeeeeEEcCCCEEEEEcCC-CEEEEECCCCCEeEEEecCCCc----eeeeE
Confidence 356677766 3356554 211 1 01112333 5666654443 4899999984332233443222 12223
Q ss_pred E-ECCEEEEEE
Q 018593 250 E-CDGCLSVIE 259 (353)
Q Consensus 250 ~-~~g~L~~v~ 259 (353)
. .+|.|++..
T Consensus 184 ~d~~g~l~v~t 194 (330)
T 3hxj_A 184 IGKDGTIYFGS 194 (330)
T ss_dssp ECTTCCEEEES
T ss_pred EcCCCEEEEEe
Confidence 3 456766654
No 151
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=63.10 E-value=72 Score=27.33 Aligned_cols=103 Identities=13% Similarity=0.027 Sum_probs=53.5
Q ss_pred EEeeecCCC---EEEEEECCCceEEEeeCC-CCCCCCCceeEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEee
Q 018593 211 LHWLTDSCS---FILALDLEGDVWRKISLP-DKVGSESRSYLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 211 ly~~~~~~~---~i~~~D~~~~~~~~~~~P-~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i 284 (353)
+...+.... .|..||+.+..-....+. .... .-..+... +|++.+.+..+..+.+|.++. . ..+..+
T Consensus 229 ~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~---~--~~~~~~ 301 (416)
T 2pm9_A 229 RVATATGSDNDPSILIWDLRNANTPLQTLNQGHQK--GILSLDWCHQDEHLLLSSGRDNTVLLWNPES---A--EQLSQF 301 (416)
T ss_dssp EEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSS--CEEEEEECSSCSSCEEEEESSSEEEEECSSS---C--CEEEEE
T ss_pred EEEEEECCCCCceEEEEeCCCCCCCcEEeecCccC--ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC---C--ccceee
Confidence 444444433 788888887531111122 1110 12233333 567776666778899995533 2 233444
Q ss_pred ccccccCccceeeeeecCC-cEEEEEeC-CcEEEEECCCCe
Q 018593 285 SLRCIKGMVPSIFPISQTR-EYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~yd~~~~~ 323 (353)
.. ....+..+ .+..++ .+++.... +.+.+||+++.+
T Consensus 302 ~~--~~~~v~~~-~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 302 PA--RGNWCFKT-KFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EC--SSSCCCCE-EECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred cC--CCCceEEE-EECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 32 12222334 455565 64554443 459999998865
No 152
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=63.06 E-value=62 Score=26.57 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=23.2
Q ss_pred eeecCCcEEEEEeC-CcEEEEECCCC-eEEEeeeec
Q 018593 298 PISQTREYVFLATH-KQVLVYHRNGR-LWKEMYSVK 331 (353)
Q Consensus 298 ~~~~~~~~v~~~~~-~~~~~yd~~~~-~~~~v~~~~ 331 (353)
.+..++..++.... +.+.+||++++ +|+.+..+.
T Consensus 313 ~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~ 348 (351)
T 3f3f_A 313 SWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVIT 348 (351)
T ss_dssp EECSSSCCEEEEETTSCEEEEEECTTSCEEEEEEEC
T ss_pred EEcCCCCEEEEecCCCcEEEEecCcCcchhheeehc
Confidence 55667775665554 45999999985 777775543
No 153
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=61.69 E-value=74 Score=27.00 Aligned_cols=176 Identities=14% Similarity=0.065 Sum_probs=84.5
Q ss_pred CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcE
Q 018593 105 EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRW 184 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W 184 (353)
....+.+||..+++....-... ..... .+.+.+...+..++.-+ ....+.+||.+++.-
T Consensus 174 ~D~~v~lwd~~~~~~~~~~~~h--------~~~v~---~~~~~~~~~g~~l~sgs----------~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 174 GDGTCALWDVESGQLLQSFHGH--------GADVL---CLDLAPSETGNTFVSGG----------CDKKAMVWDMRSGQC 232 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEECC--------SSCEE---EEEECCCSSCCEEEEEE----------TTSCEEEEETTTCCE
T ss_pred CCCcEEEEeCCCCeEEEEEcCC--------CCCeE---EEEEEeCCCCCEEEEEe----------CCCeEEEEECCCCcE
Confidence 4567889998887754321111 01111 33444433333333321 144788899888754
Q ss_pred EEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CCEEEEEEe
Q 018593 185 RKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DGCLSVIEI 260 (353)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g~L~~v~~ 260 (353)
...-..... +. ..+.+ +|.....+..+..+..+|+.+..-... ...... . ....+... +|++.+++.
T Consensus 233 ~~~~~~h~~-~v------~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~-~-~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 233 VQAFETHES-DV------NSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII-F-GASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp EEEECCCSS-CE------EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC-S-CEEEEEECTTSSEEEEEE
T ss_pred EEEecCCCC-Ce------EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcc-c-ceeEEEEeCCCCEEEEEE
Confidence 322000000 00 02222 344444444445889999987653322 221111 0 11222222 477777766
Q ss_pred cCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCc-EEEEE
Q 018593 261 SDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQ-VLVYH 318 (353)
Q Consensus 261 ~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~yd 318 (353)
.+..+.+|.+.. . ..+..+. +....+..+ .+..+|..++...... +.+||
T Consensus 304 ~d~~i~vwd~~~---~--~~~~~l~--~h~~~v~~l-~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 304 NDYTINVWDVLK---G--SRVSILF--GHENRVSTL-RVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSCEEEEETTT---C--SEEEEEC--CCSSCEEEE-EECTTSSCEEEEETTSEEEEEC
T ss_pred CCCcEEEEECCC---C--ceEEEEE--CCCCcEEEE-EECCCCCEEEEEcCCCCEEecC
Confidence 788999996533 1 1222222 233333344 5666777555555433 65553
No 154
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=61.67 E-value=70 Score=26.67 Aligned_cols=198 Identities=9% Similarity=-0.049 Sum_probs=91.6
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
+|-.++.. ...+.+.+||..+++...+..... ... .+.+.+..+.-.++..+ ....+
T Consensus 97 ~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~---------~v~---~~~~~~~~~~~~l~~~~----------~dg~i 153 (368)
T 3mmy_A 97 DGSKVFTA-SCDKTAKMWDLSSNQAIQIAQHDA---------PVK---TIHWIKAPNYSCVMTGS----------WDKTL 153 (368)
T ss_dssp TSSEEEEE-ETTSEEEEEETTTTEEEEEEECSS---------CEE---EEEEEECSSCEEEEEEE----------TTSEE
T ss_pred CCCEEEEE-cCCCcEEEEEcCCCCceeeccccC---------ceE---EEEEEeCCCCCEEEEcc----------CCCcE
Confidence 44433332 356689999998888766433221 122 34442222332333321 14468
Q ss_pred EEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEe--eCCCCCCCCCceeEEEE-
Q 018593 175 LVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKI--SLPDKVGSESRSYLLEC- 251 (353)
Q Consensus 175 ~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~--~~P~~~~~~~~~~l~~~- 251 (353)
.+|+.+++.-...-..... ... .......++..... ..+..||..+..-... ..+... ....+...
T Consensus 154 ~vwd~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 222 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPER-CYC------ADVIYPMAVVATAE-RGLIVYQLENQPSEFRRIESPLKH---QHRCVAIFK 222 (368)
T ss_dssp EEECSSCSSCSEEEECSSC-EEE------EEEETTEEEEEEGG-GCEEEEECSSSCEEEEECCCSCSS---CEEEEEEEE
T ss_pred EEEECCCCcEEEEEecCCC-ceE------EEecCCeeEEEeCC-CcEEEEEeccccchhhhccccccC---CCceEEEcc
Confidence 8899877632111000000 000 11222333333333 4888999887653333 222222 11122211
Q ss_pred C----CEEEEEEecCCeEEEEEEecCCC--CCeEEEEeecc------ccccCccceeeeeecCCcEEEEEe-CCcEEEEE
Q 018593 252 D----GCLSVIEISDEWMETWVLKDYYR--DEWHSVDKVSL------RCIKGMVPSIFPISQTREYVFLAT-HKQVLVYH 318 (353)
Q Consensus 252 ~----g~L~~v~~~~~~~~vw~l~~~~~--~~W~~~~~i~~------~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd 318 (353)
+ ....+++..+..+.+|.++.... ........-.. ......+..+ .+..++..++... ++.+.+||
T Consensus 223 ~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~s~~~dg~i~iwd 301 (368)
T 3mmy_A 223 DKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGI-AFHPVHGTLATVGSDGRFSFWD 301 (368)
T ss_dssp CTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEE-EECTTTCCEEEEETTSCEEEEE
T ss_pred cCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEE-EEecCCCEEEEEccCCeEEEEE
Confidence 1 12233444778899997754321 11111110000 0111123334 5566777566554 44599999
Q ss_pred CCCCeEEEe
Q 018593 319 RNGRLWKEM 327 (353)
Q Consensus 319 ~~~~~~~~v 327 (353)
+++++....
T Consensus 302 ~~~~~~~~~ 310 (368)
T 3mmy_A 302 KDARTKLKT 310 (368)
T ss_dssp TTTTEEEEE
T ss_pred CCCCcEEEE
Confidence 998765443
No 155
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=61.20 E-value=1.1e+02 Score=28.98 Aligned_cols=62 Identities=13% Similarity=0.074 Sum_probs=35.7
Q ss_pred ceEEEEEcCCC--cEEEeeecccc-cee--eeeecCceEEEcceEEeeecCCCEEEEEECCCce--EEEe
Q 018593 172 FKCLVFDSESN--RWRKFVSVQDY-YQF--SIMNRNQVVFVNGALHWLTDSCSFILALDLEGDV--WRKI 234 (353)
Q Consensus 172 ~~~~vy~s~~~--~W~~~~~~~~~-~~~--~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~--~~~~ 234 (353)
..+..+|..+| .|+........ .+. ........++.+|.+|.-.... .+.++|..+++ |+.-
T Consensus 87 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg-~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDG-RLIALDAATGKEVWHQN 155 (677)
T ss_dssp GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTS-EEEEEETTTCCEEEEEE
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCC-EEEEEECCCCCEEeeec
Confidence 35566776665 58776221100 000 0011233566889999887664 89999997754 6653
No 156
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=61.05 E-value=54 Score=27.13 Aligned_cols=99 Identities=8% Similarity=0.131 Sum_probs=46.0
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR 287 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~ 287 (353)
+|.+|.-+... .+.+||...+.......+... ....+...+|.|++.... .. +..++..+...|... ++
T Consensus 225 ~g~l~v~t~~~-gl~~~~~~g~~~~~~~~~~~~---~~~~~~~~~g~l~v~t~~-gg--l~~~d~~g~~~~~~~--~~-- 293 (330)
T 3hxj_A 225 DGTIYVTSLDG-HLYAINPDGTEKWRFKTGKRI---ESSPVIGNTDTIYFGSYD-GH--LYAINPDGTEKWNFE--TG-- 293 (330)
T ss_dssp TSCEEEEETTT-EEEEECTTSCEEEEEECSSCC---CSCCEECTTSCEEEECTT-CE--EEEECTTSCEEEEEE--CS--
T ss_pred CCeEEEEcCCC-eEEEECCCCCEeEEeeCCCCc---cccceEcCCCeEEEecCC-CC--EEEECCCCcEEEEEE--cC--
Confidence 35665555443 888888766554444433322 111222235777765432 22 444433222344432 21
Q ss_pred cccCccceeeeeecCCcEEEEEeCCcEEEEECCC
Q 018593 288 CIKGMVPSIFPISQTREYVFLATHKQVLVYHRNG 321 (353)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~ 321 (353)
......+ ....+|. +++.+.+.++.+++..
T Consensus 294 --~~~~~~~-~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 294 --SWIIATP-VIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp --SCCCSCC-EECTTCC-EEEECTTSCEEEEEC-
T ss_pred --Cccccce-EEcCCCE-EEEEcCCCeEEEEecc
Confidence 1111223 3445677 6777766655555444
No 157
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=60.86 E-value=68 Score=26.30 Aligned_cols=66 Identities=12% Similarity=0.211 Sum_probs=37.2
Q ss_pred CEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecC---CcEEEEEe-CCcEEEEECCCC
Q 018593 253 GCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQT---REYVFLAT-HKQVLVYHRNGR 322 (353)
Q Consensus 253 g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~---~~~v~~~~-~~~~~~yd~~~~ 322 (353)
+++.+.+..+..+.+|.++.. ...|.....+.- ....+..+ .+..+ +..+.... ++.+.+||+++.
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~-~~~~~~~~~l~~--H~~~V~~v-~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSD-AQTYVLESTLEG--HSDWVRDV-AWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETT-TTEEEEEEEECC--CSSCEEEE-EECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cceEEEEcCCCcEEEEEEcCC-CceEEEEEEecC--CCCceEEE-EECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 445555557789999988542 245666555432 22223333 44444 35444444 345999998774
No 158
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=60.72 E-value=1.1e+02 Score=29.17 Aligned_cols=120 Identities=11% Similarity=0.070 Sum_probs=63.4
Q ss_pred CceEEEcceEEeeecCCCEEEEEECCCc--eEEEe-eCCCCC-----CCCCceeEEEECCEEEEEEecCCeEEEEEEec-
Q 018593 202 NQVVFVNGALHWLTDSCSFILALDLEGD--VWRKI-SLPDKV-----GSESRSYLLECDGCLSVIEISDEWMETWVLKD- 272 (353)
Q Consensus 202 ~~~v~~~g~ly~~~~~~~~i~~~D~~~~--~~~~~-~~P~~~-----~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~- 272 (353)
..+++.+|.+|..+... .+.++|..++ .|+.- ..+... ........+..+|+|++... +.. +..++.
T Consensus 64 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-dg~--l~AlDa~ 139 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS-VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-DGR--LEAIDAK 139 (689)
T ss_dssp CCCEEETTEEEEECGGG-CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-TSE--EEEEETT
T ss_pred ecCEEECCEEEEEcCCC-eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-CCE--EEEEECC
Confidence 34678899999988764 8999998765 47653 222110 00012234556777776543 233 333432
Q ss_pred CCCCCeEEEEeeccc-cccCccceeeeeecCCcEEEEEe-------CCcEEEEECCCCeEEEeee
Q 018593 273 YYRDEWHSVDKVSLR-CIKGMVPSIFPISQTREYVFLAT-------HKQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 273 ~~~~~W~~~~~i~~~-~~~~~~~~~~~~~~~~~~v~~~~-------~~~~~~yd~~~~~~~~v~~ 329 (353)
.++..|......... .......++ ..++. +++.. .+.++.||.+|++..+-..
T Consensus 140 TG~~~W~~~~~~~~~~~~~~~~sP~---v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 140 TGQRAWSVDTRADHKRSYTITGAPR---VVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TCCEEEEEECCSCTTSCCBCCSCCE---EETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCEeeeecCcCCCCCCccccCCcE---EECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 233567764321111 111111222 12555 55543 2459999999987655443
No 159
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=59.81 E-value=75 Score=26.45 Aligned_cols=71 Identities=14% Similarity=0.092 Sum_probs=42.9
Q ss_pred CEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEeee
Q 018593 253 GCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 253 g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v~~ 329 (353)
|++.+.+..+..+.+|.++..+ ......+. .....+..+ .+..++..++.... +.+.+||+++++...+..
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~--~h~~~v~~~-~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 125 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSG---QTIPKAQQ--MHTGPVLDV-CWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ 125 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTS---CEEEEEEE--ECSSCEEEE-EECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceEEEEECCCCcEEEEEcCCCC---ceeEEEec--cccCCEEEE-EECcCCCEEEEEcCCCcEEEEEcCCCCceeecc
Confidence 4666666677889999886522 22222222 122223344 55667776666554 459999999998776543
No 160
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=59.47 E-value=78 Score=26.49 Aligned_cols=98 Identities=15% Similarity=0.058 Sum_probs=45.4
Q ss_pred CEEEEEECCCc------eEEEe-eCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccC
Q 018593 219 SFILALDLEGD------VWRKI-SLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKG 291 (353)
Q Consensus 219 ~~i~~~D~~~~------~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~ 291 (353)
..|..+|+.+. .|... .++..... .-..+.-..+.+.+.+..+..+.||.... .+|.............
T Consensus 221 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~s~~~~l~s~~~dg~v~iw~~~~---~~~~~~~~~~~~h~~~ 296 (330)
T 2hes_X 221 STVRVWKYMGDDEDDQQEWVCEAILPDVHKR-QVYNVAWGFNGLIASVGADGVLAVYEEVD---GEWKVFAKRALCHGVY 296 (330)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEECCSCCSS-CEEEEEECTTSCEEEEETTSCEEEEEEET---TEEEEEEEESCTTTTS
T ss_pred CeEEEEEecCCCccccceeEEeeeccccccc-ceEEEEEcCCCEEEEEeCCCEEEEEEcCC---CceEEEeccccccccc
Confidence 46777776542 34433 33321111 12233334455444444778999998754 5676654432211111
Q ss_pred ccceeeeeec--CCcEEEEEeC-CcEEEEECCC
Q 018593 292 MVPSIFPISQ--TREYVFLATH-KQVLVYHRNG 321 (353)
Q Consensus 292 ~~~~~~~~~~--~~~~v~~~~~-~~~~~yd~~~ 321 (353)
.+..+ .+.. ++.++..... +.+.+||+++
T Consensus 297 ~v~~v-~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 297 EINVV-KWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CEEEE-EEC-----CCEEEEETTSEEEEEEC--
T ss_pred eEEEE-EEecCCCceEEEEecCCCcEEEEEecc
Confidence 12223 3333 4554544443 4488898865
No 161
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=59.22 E-value=77 Score=26.35 Aligned_cols=144 Identities=10% Similarity=0.013 Sum_probs=68.9
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCce----EEEeeCCCCCCCCCce
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDV----WRKISLPDKVGSESRS 246 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~----~~~~~~P~~~~~~~~~ 246 (353)
...+.+|+.+++.=......... ......... ..+|.....+.....|..||+.+.. +....+..... .-.
T Consensus 189 d~~i~i~d~~~~~~~~~~~~~~~-v~~~~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~v~ 263 (357)
T 3i2n_A 189 NGDIKLFDLRNMALRWETNIKNG-VCSLEFDRK--DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKS--TVW 263 (357)
T ss_dssp TSEEEEEETTTTEEEEEEECSSC-EEEEEESCS--SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSS--CEE
T ss_pred CCeEEEEECccCceeeecCCCCc-eEEEEcCCC--CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcC--CEE
Confidence 34788999887653222111111 111111110 0034444444444588888877643 22111111111 123
Q ss_pred eEEEEC-CE-EEEEEecCCeEEEEEEecCCC--------------CCeEEEEeeccccccCccceeeeeecCCcEEEE-E
Q 018593 247 YLLECD-GC-LSVIEISDEWMETWVLKDYYR--------------DEWHSVDKVSLRCIKGMVPSIFPISQTREYVFL-A 309 (353)
Q Consensus 247 ~l~~~~-g~-L~~v~~~~~~~~vw~l~~~~~--------------~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~-~ 309 (353)
.+.... |+ +.+.+..+..+.+|.++.... ..+..+..+.. ....+..+ .+..++..+++ .
T Consensus 264 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~v~~~-~~s~~~~~l~~s~ 340 (357)
T 3i2n_A 264 QVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL--STQPISSL-DWSPDKRGLCVCS 340 (357)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC--CSSCEEEE-EECSSSTTEEEEE
T ss_pred EEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc--CCCCeeEE-EEcCCCCeEEEEe
Confidence 333443 56 444455778999999865321 13344444432 22223334 55667775553 4
Q ss_pred e-CCcEEEEECCCC
Q 018593 310 T-HKQVLVYHRNGR 322 (353)
Q Consensus 310 ~-~~~~~~yd~~~~ 322 (353)
. ++.+.+||+++.
T Consensus 341 ~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 341 SFDQTVRVLIVTKL 354 (357)
T ss_dssp ETTSEEEEEEECC-
T ss_pred cCCCcEEEEECCCc
Confidence 4 455999998764
No 162
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=59.20 E-value=72 Score=26.01 Aligned_cols=87 Identities=9% Similarity=0.133 Sum_probs=47.0
Q ss_pred eeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC-
Q 018593 234 ISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK- 312 (353)
Q Consensus 234 ~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 312 (353)
++.|....+-+...|.-+.+.+..++ .+..+.||.++ +.+-... +...+....+..+ .+..++..++.+...
T Consensus 17 ldap~~~~d~y~~~l~WS~~~~lAvg-~D~tV~iWd~~---tg~~~~~--~~~~~~~~~V~~v-~~~~~~~~l~sgs~Dg 89 (318)
T 4ggc_A 17 LDAPEIRNDYYLNLVDWSSGNVLAVA-LDNSVYLWSAS---SGDILQL--LQMEQPGEYISSV-AWIKEGNYLAVGTSSA 89 (318)
T ss_dssp EECTTCCCCTTCBCEEECTTSEEEEE-ETTEEEEEETT---TCCEEEE--EECCSTTCCEEEE-EECTTSSEEEEEETTS
T ss_pred eeCCCCcccccceEEEECCCCEEEEE-eCCEEEEEECC---CCCEEEE--EEecCCCCeEEEE-EECCCCCEEEEEECCC
Confidence 34554432211223444555544333 46789999543 2333333 3333333333445 566788866666544
Q ss_pred cEEEEECCCCeEEEe
Q 018593 313 QVLVYHRNGRLWKEM 327 (353)
Q Consensus 313 ~~~~yd~~~~~~~~v 327 (353)
.+.+||.++++....
T Consensus 90 ~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRN 104 (318)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred cEEEeecCCceeEEE
Confidence 499999999876544
No 163
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=58.90 E-value=75 Score=26.13 Aligned_cols=103 Identities=13% Similarity=0.114 Sum_probs=55.6
Q ss_pred CEEEEEECCCceEEE-eeCCCCCCCCCceeEEEE-CCE-EEEEEecCCeEEEEEEecCCCCCeEEEEeecccc---ccCc
Q 018593 219 SFILALDLEGDVWRK-ISLPDKVGSESRSYLLEC-DGC-LSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRC---IKGM 292 (353)
Q Consensus 219 ~~i~~~D~~~~~~~~-~~~P~~~~~~~~~~l~~~-~g~-L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~---~~~~ 292 (353)
..|..+|+.+.+... +..+.... ....+... +|+ |++.......+.+|.++. .+ .+..++... ....
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~--~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGP--TPMVPMVAPGGRIAYATVNKSESLVKIDLVT---GE--TLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTT--CCCCEEECTTSSEEEEEETTTTEEEEEETTT---CC--EEEEEECCBTTEEEEC
T ss_pred CeEEEEECCCCcEEEEEEcCCCCC--CccceEEcCCCCEEEEEeCCCCeEEEEECCC---CC--eEeeEEcCCccccccc
Confidence 589999998876543 35554210 01223333 464 454444566777774422 22 233333311 0111
Q ss_pred cceeeeeecCCcEEEEEe-------------CCcEEEEECCCCeEEEeee
Q 018593 293 VPSIFPISQTREYVFLAT-------------HKQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 293 ~~~~~~~~~~~~~v~~~~-------------~~~~~~yd~~~~~~~~v~~ 329 (353)
...+ .+..+|+.+++.. .+.+.+||+++++......
T Consensus 84 ~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 84 LFGA-ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp TTCE-EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE
T ss_pred ccce-EECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe
Confidence 2334 5667787666663 3669999999987765433
No 164
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=58.87 E-value=75 Score=26.14 Aligned_cols=92 Identities=13% Similarity=0.129 Sum_probs=49.7
Q ss_pred CEEEEEECCCceEEE-eeCCCCCCCCCceeEEE-ECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCcccee
Q 018593 219 SFILALDLEGDVWRK-ISLPDKVGSESRSYLLE-CDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSI 296 (353)
Q Consensus 219 ~~i~~~D~~~~~~~~-~~~P~~~~~~~~~~l~~-~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~ 296 (353)
..+..+|..+..-.. +...... -..+.. .+|++.+.+..+..+.+|.++. .+ .+..+. +....+..+
T Consensus 35 g~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~s~d~~i~vwd~~~---~~--~~~~~~--~h~~~v~~~ 103 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGSDDFRIRVFNYNT---GE--KVVDFE--AHPDYIRSI 103 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEETTSEEEEEETTT---CC--EEEEEE--CCSSCEEEE
T ss_pred CcEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEEEEECCCCEEEEEECCC---Cc--EEEEEe--CCCCcEEEE
Confidence 478888888765322 2222111 112222 2466666666788999996543 21 222222 222223344
Q ss_pred eeeecCCcEEEEEeC-CcEEEEECCCC
Q 018593 297 FPISQTREYVFLATH-KQVLVYHRNGR 322 (353)
Q Consensus 297 ~~~~~~~~~v~~~~~-~~~~~yd~~~~ 322 (353)
.+..++..++.... +.+.+||++++
T Consensus 104 -~~~~~~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 104 -AVHPTKPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp -EECSSSSEEEEEETTSCEEEEEGGGT
T ss_pred -EEcCCCCEEEEECCCCeEEEEECCCC
Confidence 55667775555544 44889998876
No 165
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=57.67 E-value=1.2e+02 Score=28.30 Aligned_cols=121 Identities=12% Similarity=0.058 Sum_probs=62.4
Q ss_pred CceEEEcceEEeeec-CCCEEEEEEC-CCc--eEEEe-eCCCC-----CCCCCceeEEE--ECCE----EEEEEecCCeE
Q 018593 202 NQVVFVNGALHWLTD-SCSFILALDL-EGD--VWRKI-SLPDK-----VGSESRSYLLE--CDGC----LSVIEISDEWM 265 (353)
Q Consensus 202 ~~~v~~~g~ly~~~~-~~~~i~~~D~-~~~--~~~~~-~~P~~-----~~~~~~~~l~~--~~g~----L~~v~~~~~~~ 265 (353)
..+++.+|.+|.... .. .+.++|. .++ .|+.- ..+.. +.......++. .+|+ |++...+ .
T Consensus 56 ~tP~v~~g~vyv~~~~~~-~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d-g-- 131 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN-NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD-G-- 131 (599)
T ss_dssp SCCEEETTEEEEECSTTT-CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT-S--
T ss_pred eccEEECCEEEEEeCCCC-EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC-C--
Confidence 446888999999887 54 8999999 664 57654 11110 00001122344 4555 6654322 2
Q ss_pred EEEEEec-CCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe-------CCcEEEEECCCCeEEEeeee
Q 018593 266 ETWVLKD-YYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT-------HKQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 266 ~vw~l~~-~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~-------~~~~~~yd~~~~~~~~v~~~ 330 (353)
.+..|+. .++..|.....-..........+. . .++. |++.. .+.++.||.+|++..+-...
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~-v--~~g~-V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENSDIKVGSTLTIAPY-V--VKDK-VIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCE-E--ETTE-EEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEEECCCCCEEEeecCCCCCccceeecCCE-E--ECCE-EEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 3444542 233557653111001111112222 1 2454 66654 35699999999876655443
No 166
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=56.21 E-value=86 Score=26.01 Aligned_cols=107 Identities=10% Similarity=-0.037 Sum_probs=58.0
Q ss_pred EcceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE----CCEEEEEEecCCeEEEEEEecCCC-CCeEE
Q 018593 207 VNGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC----DGCLSVIEISDEWMETWVLKDYYR-DEWHS 280 (353)
Q Consensus 207 ~~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~----~g~L~~v~~~~~~~~vw~l~~~~~-~~W~~ 280 (353)
-+|.+...+.....|..||+.+.+-... ..+. .-..+... +|...+++..+..+.+|.+..... .....
T Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 252 (357)
T 3i2n_A 178 QEERVVCAGYDNGDIKLFDLRNMALRWETNIKN-----GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFAS 252 (357)
T ss_dssp -CCCEEEEEETTSEEEEEETTTTEEEEEEECSS-----CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEE
T ss_pred CCCCEEEEEccCCeEEEEECccCceeeecCCCC-----ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceee
Confidence 3555555555545899999998875433 2221 12333333 567666666778999998865322 22211
Q ss_pred EEeeccccccCccceeeeeecCCc-EEEEEeC-CcEEEEECCCC
Q 018593 281 VDKVSLRCIKGMVPSIFPISQTRE-YVFLATH-KQVLVYHRNGR 322 (353)
Q Consensus 281 ~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~-~~~~~yd~~~~ 322 (353)
. .+ ......+..+ .+..++. +++.... +.+.+||++++
T Consensus 253 ~-~~--~~~~~~v~~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 253 V-SE--KAHKSTVWQV-RHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp E-EE--ECCSSCEEEE-EEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred e-cc--CCCcCCEEEE-EECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 1 11 1222223334 4555666 4444443 45899998764
No 167
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=55.92 E-value=90 Score=26.16 Aligned_cols=110 Identities=11% Similarity=0.037 Sum_probs=60.1
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
+|.+...+..+..|..+|+.+...... +..... .-..+... +|++.+.+..+..+.+|.+.. . ..+..+..
T Consensus 195 ~~~~l~sg~~d~~v~~wd~~~~~~~~~-~~~h~~--~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~---~--~~~~~~~~ 266 (340)
T 1got_B 195 DTRLFVSGACDASAKLWDVREGMCRQT-FTGHES--DINAICFFPNGNAFATGSDDATCRLFDLRA---D--QELMTYSH 266 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEE-ECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTT---T--EEEEEECC
T ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEE-EcCCcC--CEEEEEEcCCCCEEEEEcCCCcEEEEECCC---C--cEEEEEcc
Confidence 355544544445888999887654322 111110 11223333 467666666788999996633 2 12333332
Q ss_pred ccccCccceeeeeecCCcEEEEEeCC-cEEEEECCCCeEEE
Q 018593 287 RCIKGMVPSIFPISQTREYVFLATHK-QVLVYHRNGRLWKE 326 (353)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~yd~~~~~~~~ 326 (353)
......+..+ .+..+|..++.+... .+.+||..+.+-..
T Consensus 267 ~~~~~~v~~~-~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 267 DNIICGITSV-SFSKSGRLLLAGYDDFNCNVWDALKADRAG 306 (340)
T ss_dssp TTCCSCEEEE-EECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCcccceEEE-EECCCCCEEEEECCCCeEEEEEcccCcEee
Confidence 2222223344 566788866666544 49999998876443
No 168
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=55.83 E-value=1.1e+02 Score=26.92 Aligned_cols=206 Identities=8% Similarity=-0.010 Sum_probs=103.5
Q ss_pred EeeecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCC
Q 018593 90 VRASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPD 169 (353)
Q Consensus 90 ~~~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 169 (353)
+.-..+|-|++.. .....+.++|+.+++...+...... .. +.+++..+ .++... .+
T Consensus 136 la~d~~g~lyv~d-~~~~~I~~id~~~g~~~~~~~~~~~------~~-------ia~~~~g~--~l~~~d--------~~ 191 (409)
T 3hrp_A 136 IAAVGNNTVLAYQ-RDDPRVRLISVDDNKVTTVHPGFKG------GK-------PAVTKDKQ--RVYSIG--------WE 191 (409)
T ss_dssp EEECSTTEEEEEE-TTTTEEEEEETTTTEEEEEEETCCB------CB-------CEECTTSS--EEEEEB--------SS
T ss_pred EEEeCCCCEEEEe-cCCCcEEEEECCCCEEEEeeccCCC------Cc-------eeEecCCC--cEEEEe--------cC
Confidence 3334567776664 4557899999998887766443211 01 12233222 344331 11
Q ss_pred CcceEEEEEcCCCc-EEEeeeccccceeeeeecCceEEE---cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCC
Q 018593 170 GTFKCLVFDSESNR-WRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSES 244 (353)
Q Consensus 170 ~~~~~~vy~s~~~~-W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~ 244 (353)
+...+.+++..++. .+....... .... ...++.+ +|.||+.... ..|..||+.+.....+ ..+.......
T Consensus 192 ~~~~I~~~d~~~~~~~~~~g~~~~---~~~~-~p~~iav~p~~g~lyv~d~~-~~I~~~d~~~~~~~~~~~~~~~g~~~~ 266 (409)
T 3hrp_A 192 GTHTVYVYMKASGWAPTRIGQLGS---TFSG-KIGAVALDETEEWLYFVDSN-KNFGRFNVKTQEVTLIKQLELSGSLGT 266 (409)
T ss_dssp TTCEEEEEEGGGTTCEEEEEECCT---TSCS-CCCBCEECTTSSEEEEECTT-CEEEEEETTTCCEEEEEECCCCSCCCC
T ss_pred CCceEEEEEcCCCceeEEeeeccc---hhcC-CcEEEEEeCCCCeEEEEECC-CcEEEEECCCCCEEEEecccccCCCCC
Confidence 12267777765542 222211001 0111 1122333 6889995443 4899999998776555 1111111112
Q ss_pred c-e-eEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec-cccc---------cCccceeeeeecCCcEEEEEe
Q 018593 245 R-S-YLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS-LRCI---------KGMVPSIFPISQTREYVFLAT 310 (353)
Q Consensus 245 ~-~-~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~-~~~~---------~~~~~~~~~~~~~~~~v~~~~ 310 (353)
. . .++.. +|.|++....... |++++..+ . -..+..-. ..+. ......+ ++..+|. +++..
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~~~~--I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gi-a~d~dG~-lyvad 340 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQNLSS--VYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGM-TVDEDGN-FYIVD 340 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETTTTE--EEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEE-EECTTCC-EEEEE
T ss_pred CccccEEEeCCCCEEEEEeCCCCE--EEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEE-EEeCCCC-EEEEe
Confidence 2 2 55555 4888887665555 44443222 2 12221111 0010 1112345 6777888 55544
Q ss_pred C---CcEEEEECCCCeEEEeeee
Q 018593 311 H---KQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 311 ~---~~~~~yd~~~~~~~~v~~~ 330 (353)
. +.+..+|+.+++...+...
T Consensus 341 ~~~~~~I~~~~~~~G~v~~~~g~ 363 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGYVSTVAGQ 363 (409)
T ss_dssp TTTTCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEECCCCEEEEEeCC
Confidence 3 3499999888888777543
No 169
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=55.55 E-value=1e+02 Score=26.64 Aligned_cols=182 Identities=13% Similarity=0.059 Sum_probs=87.8
Q ss_pred CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcE
Q 018593 105 EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRW 184 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W 184 (353)
....+.+||+.+++....-+... . ..++.+++... .++......... ......+.+|+..++.-
T Consensus 232 ~~~~i~~~d~~~~~~~~~~~~~~----------~--~~~~~~~~~g~--~l~~~~~~~~~~--~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 232 ISEDISVIDRKTKLEIRKTDKIG----------L--PRGLLLSKDGK--ELYIAQFSASNQ--ESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp TTTEEEEEETTTTEEEEECCCCS----------E--EEEEEECTTSS--EEEEEEEESCTT--CSCCEEEEEEETTTTEE
T ss_pred CCCcEEEEECCCCcEEEEecCCC----------C--ceEEEEcCCCC--EEEEEECCCCcc--ccCCCeEEEEECCCCcE
Confidence 45678889988877654322211 1 11455555332 233322100000 01245788999887744
Q ss_pred EEeeeccccceeeeeecCceEEEcc-eEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEe-c
Q 018593 185 RKFVSVQDYYQFSIMNRNQVVFVNG-ALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEI-S 261 (353)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~g-~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~-~ 261 (353)
......... +.... ..-+| .+|..+.....+..||+.+.+.... ++... ....+... +|+..++.. .
T Consensus 296 ~~~~~~~~~-~~~~~-----~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~-~~~~~---~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 296 IDTIGPPGN-KRHIV-----SGNTENKIYVSDMCCSKIEVYDLKEKKVQKS-IPVFD---KPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp EEEEEEEEC-EEEEE-----ECSSTTEEEEEETTTTEEEEEETTTTEEEEE-EECSS---SEEEEEECTTSSEEEEEECC
T ss_pred EeeccCCCC-cceEE-----ECCCCCEEEEEecCCCEEEEEECCCCcEEEE-ecCCC---CCCeEEEcCCCCEEEEEecC
Confidence 322110111 11111 11135 4666655556899999998764332 22211 12334443 365444443 3
Q ss_pred C--------------CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEe--CCcEEEEECCC
Q 018593 262 D--------------EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLAT--HKQVLVYHRNG 321 (353)
Q Consensus 262 ~--------------~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~yd~~~ 321 (353)
. ..+.+|.++. ...+..+... .....+ .+..+|..+++.. .+.+.+||+++
T Consensus 366 ~~~~~~~~~~~g~~dg~v~~~d~~~-----~~~~~~~~~~---~~~~~~-~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 366 PNHPTEGYLKKGLVLGKVYVIDTTT-----DTVKEFWEAG---NQPTGL-DVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CCCTTTCTTSCCSSCCEEEEEETTT-----TEEEEEEECS---SSEEEE-EECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCccccccccccccceEEEEEECCC-----CcEEEEecCC---CCCceE-EEcCCCCEEEEEECCCCeEEEEEecC
Confidence 2 3777774422 2344444431 112334 5667787666664 34588888763
No 170
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=55.01 E-value=7.5 Score=33.92 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=19.9
Q ss_pred eEEEcceEEeeecCCCEEEEEECCCce--EEE
Q 018593 204 VVFVNGALHWLTDSCSFILALDLEGDV--WRK 233 (353)
Q Consensus 204 ~v~~~g~ly~~~~~~~~i~~~D~~~~~--~~~ 233 (353)
++..+|.+|.-+..+ .+.++|..+++ |+.
T Consensus 5 P~v~~~~v~~gs~dg-~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 5 VTLPETLLFVSTLDG-SLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ---CTTEEEEEETTS-EEEEEETTTCCEEEEE
T ss_pred CeeeCCEEEEEcCCC-EEEEEECCCCCEEEEe
Confidence 456778888877665 89999987754 654
No 171
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=54.53 E-value=97 Score=26.07 Aligned_cols=191 Identities=9% Similarity=0.084 Sum_probs=92.9
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
+|-++... .....+.|||..++++......... +..... .+.+.+.. . .++..+ ....+
T Consensus 27 ~g~~las~-~~D~~i~iw~~~~~~~~~~~~~~~~-----h~~~v~---~~~~sp~g-~-~l~s~s----------~D~~v 85 (345)
T 3fm0_A 27 AGTLLASC-GGDRRIRIWGTEGDSWICKSVLSEG-----HQRTVR---KVAWSPCG-N-YLASAS----------FDATT 85 (345)
T ss_dssp TSSCEEEE-ETTSCEEEEEEETTEEEEEEEECSS-----CSSCEE---EEEECTTS-S-EEEEEE----------TTSCE
T ss_pred CCCEEEEE-cCCCeEEEEEcCCCcceeeeeeccc-----cCCcEE---EEEECCCC-C-EEEEEE----------CCCcE
Confidence 44444443 3456788898887765432111111 111122 45555532 2 233321 13456
Q ss_pred EEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCc-eEEEe-eCCCCCCCCCceeEEE
Q 018593 175 LVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGD-VWRKI-SLPDKVGSESRSYLLE 250 (353)
Q Consensus 175 ~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~-~~~~~-~~P~~~~~~~~~~l~~ 250 (353)
.+++..++.++.......- ... -..+.+ +|.+...+..+..|..+|+.++ ....+ .+..... .-..+.-
T Consensus 86 ~iw~~~~~~~~~~~~~~~h-~~~----v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~ 158 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGH-ENE----VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ--DVKHVVW 158 (345)
T ss_dssp EEEEECCC-EEEEEEECCC-SSC----EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS--CEEEEEE
T ss_pred EEEEccCCCeEEEEEccCC-CCC----ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC--CeEEEEE
Confidence 7888777766554221110 000 001221 3544444444457888888764 23333 2222211 1122232
Q ss_pred E-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEEC
Q 018593 251 C-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHR 319 (353)
Q Consensus 251 ~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~ 319 (353)
. +|++.+.+..+..+.+|.++. ..|.....+.- ....+..+ .+..+|..++.... +.+.+||.
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~---~~~~~~~~~~~--h~~~v~~l-~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEE---DDWVCCATLEG--HESTVWSL-AFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEET---TEEEEEEEECC--CSSCEEEE-EECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEEecC---CCEEEEEEecC--CCCceEEE-EECCCCCEEEEEeCCCeEEEecc
Confidence 2 466655555778899998755 45766555432 22233344 56667775665554 34888875
No 172
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=54.38 E-value=1.1e+02 Score=26.60 Aligned_cols=64 Identities=8% Similarity=0.178 Sum_probs=37.6
Q ss_pred CEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC-cEEEEECCCCeE
Q 018593 253 GCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK-QVLVYHRNGRLW 324 (353)
Q Consensus 253 g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~yd~~~~~~ 324 (353)
|.+.+.+..+..+.+|.+.. . ..+..+. +....+..+ .+..++..++..... .+.+||.++++.
T Consensus 308 g~~l~sgs~D~~i~iwd~~~---~--~~~~~~~--~h~~~v~~v-~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVST---G--MCLMTLV--GHDNWVRGV-LFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CCEEEEEETTSEEEEEETTT---T--EEEEEEE--CCSSCEEEE-EECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred CCEEEEEeCCCeEEEEECCC---C--ceEEEEE--CCCCcEEEE-EEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 55666556778899996532 1 2333322 222233344 556677756655544 499999988754
No 173
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=54.17 E-value=86 Score=25.38 Aligned_cols=110 Identities=5% Similarity=-0.022 Sum_probs=54.3
Q ss_pred EEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEee
Q 018593 205 VFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 205 v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i 284 (353)
+..++.....+.....+..+|....... +....... ........++.+.+++..+..+.+|. . . .....+
T Consensus 110 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~v--~~~~~~~~~~~~l~~~~~d~~i~i~d---~--~--~~~~~~ 179 (313)
T 3odt_A 110 LSFQDGVVISGSWDKTAKVWKEGSLVYN-LQAHNASV--WDAKVVSFSENKFLTASADKTIKLWQ---N--D--KVIKTF 179 (313)
T ss_dssp EEEETTEEEEEETTSEEEEEETTEEEEE-EECCSSCE--EEEEEEETTTTEEEEEETTSCEEEEE---T--T--EEEEEE
T ss_pred EEecCCEEEEEeCCCCEEEEcCCcEEEe-cccCCCce--eEEEEccCCCCEEEEEECCCCEEEEe---c--C--ceEEEE
Confidence 3335555555544458889993322222 22211110 11122222577766666778899995 1 1 122222
Q ss_pred ccccccCccceeeeeecCCcEEEEEe-CCcEEEEECCCCeEEEe
Q 018593 285 SLRCIKGMVPSIFPISQTREYVFLAT-HKQVLVYHRNGRLWKEM 327 (353)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd~~~~~~~~v 327 (353)
... .......+ .+..++. ++... ++.+.+||+++++....
T Consensus 180 ~~~-~~~~i~~~-~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~ 220 (313)
T 3odt_A 180 SGI-HNDVVRHL-AVVDDGH-FISCSNDGLIKLVDMHTGDVLRT 220 (313)
T ss_dssp CSS-CSSCEEEE-EEEETTE-EEEEETTSEEEEEETTTCCEEEE
T ss_pred ecc-CcccEEEE-EEcCCCe-EEEccCCCeEEEEECCchhhhhh
Confidence 211 12222333 4555666 44444 45599999998765544
No 174
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=53.96 E-value=83 Score=27.55 Aligned_cols=67 Identities=6% Similarity=0.080 Sum_probs=35.1
Q ss_pred EEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeec-CCcEEEEEe-CCcEEEEECCCC
Q 018593 255 LSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQ-TREYVFLAT-HKQVLVYHRNGR 322 (353)
Q Consensus 255 L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-~~~~v~~~~-~~~~~~yd~~~~ 322 (353)
+.+.+..+..+.+|.++......+..............+..+ .+.. ++.+++... .+.+.+||++++
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDV-AWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEE-EECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeee-EEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 555555778899998755332334332111111222222333 3343 566454444 455999999986
No 175
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=53.68 E-value=1e+02 Score=26.23 Aligned_cols=144 Identities=14% Similarity=0.112 Sum_probs=76.9
Q ss_pred eecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 92 ASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 92 ~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
+..+|.|++.. .....++.+++.++....+...... ... ++.+|...+ +++.. +...
T Consensus 81 d~~~~~ly~~D-~~~~~I~r~~~~g~~~~~~~~~~~~--------~p~---glavd~~~g--~ly~~---------d~~~ 137 (349)
T 3v64_C 81 HHRRELVFWSD-VTLDRILRANLNGSNVEEVVSTGLE--------SPG---GLAVDWVHD--KLYWT---------DSGT 137 (349)
T ss_dssp ETTTTEEEEEE-TTTTEEEEEETTSCSCEEEECSSCS--------CCC---EEEEETTTT--EEEEE---------ETTT
T ss_pred eccccEEEEEe-ccCCceEEEecCCCCceEEEeCCCC--------Ccc---EEEEecCCC--eEEEE---------cCCC
Confidence 44677777775 3456788888887665444222111 011 667775433 34443 1224
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCC-CEEEEEECCCceEEEeeCCCCCCCCCcee
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSC-SFILALDLEGDVWRKISLPDKVGSESRSY 247 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~-~~i~~~D~~~~~~~~~~~P~~~~~~~~~~ 247 (353)
..+++++.....-+.... ..+ . ...++.+ +|.+||..... ..|.++|+....-..+- ..... ...-
T Consensus 138 ~~I~~~~~dG~~~~~l~~-~~l-----~-~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~~~--~PnG 207 (349)
T 3v64_C 138 SRIEVANLDGAHRKVLLW-QSL-----E-KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DTHLF--WPNG 207 (349)
T ss_dssp TEEEEEETTSCSCEEEEC-TTC-----S-CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC-CSSCS--CEEE
T ss_pred CeEEEEcCCCCceEEEEe-CCC-----C-CcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE-ECCCC--Ccce
Confidence 577788766543222210 111 0 1112333 58999998765 68999999875444331 11110 2234
Q ss_pred EEEE--CCEEEEEEecCCeEEEE
Q 018593 248 LLEC--DGCLSVIEISDEWMETW 268 (353)
Q Consensus 248 l~~~--~g~L~~v~~~~~~~~vw 268 (353)
|+.. +|+||++......+...
T Consensus 208 la~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 208 LTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCEEEEEECCCCEEEEE
Confidence 5554 68999887655554444
No 176
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=52.66 E-value=93 Score=29.76 Aligned_cols=58 Identities=5% Similarity=0.009 Sum_probs=33.6
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEE
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWR 232 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~ 232 (353)
...+++|+.....-+.+ ... ...........+.++.+||.......|.++|..+++..
T Consensus 561 ~~~I~~~d~dG~~~~~~---~~~-~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 561 LHSISSIDVNGGNRKTI---LED-EKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp TTEEEEECSSSSCCEEE---CCC-SSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEE
T ss_pred CCeEEEEccCCCceEEE---Eec-CCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCce
Confidence 45777777654333333 111 01111122244567799999866578999999876543
No 177
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=52.29 E-value=1.6e+02 Score=28.05 Aligned_cols=192 Identities=10% Similarity=-0.008 Sum_probs=95.0
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
+|-.++.. ...+.+.|||..+++....-.... .... .+.+.+.. . .++..+ ....+
T Consensus 66 ~~~~l~~~-~~dg~i~vw~~~~~~~~~~~~~~~--------~~v~---~~~~s~~~-~-~l~~~~----------~dg~i 121 (814)
T 3mkq_A 66 RKNWIIVG-SDDFRIRVFNYNTGEKVVDFEAHP--------DYIR---SIAVHPTK-P-YVLSGS----------DDLTV 121 (814)
T ss_dssp GGTEEEEE-ETTSEEEEEETTTCCEEEEEECCS--------SCEE---EEEECSSS-S-EEEEEE----------TTSEE
T ss_pred CCCEEEEE-eCCCeEEEEECCCCcEEEEEecCC--------CCEE---EEEEeCCC-C-EEEEEc----------CCCEE
Confidence 44333332 356789999998887654221111 1122 35554432 2 233221 14578
Q ss_pred EEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEE
Q 018593 175 LVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLE 250 (353)
Q Consensus 175 ~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~ 250 (353)
.+|+..++ |......... . ..-..+.+ +|.....+..+..|..+|+.+..-... ..+... ....+..
T Consensus 122 ~vw~~~~~-~~~~~~~~~~-~----~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~---~v~~~~~ 192 (814)
T 3mkq_A 122 KLWNWENN-WALEQTFEGH-E----HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQER---GVNYVDY 192 (814)
T ss_dssp EEEEGGGT-SEEEEEEECC-S----SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTT---CCCEEEE
T ss_pred EEEECCCC-ceEEEEEcCC-C----CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCC---CEEEEEE
Confidence 88988765 2222110100 0 00012222 344444444445899999876543222 222111 1122222
Q ss_pred E---CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEE
Q 018593 251 C---DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKE 326 (353)
Q Consensus 251 ~---~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~ 326 (353)
. +|.+.+++..+..+.+|.++. ...+..+.. ....+..+ .+..++..++..+. +.+.+||+.+++...
T Consensus 193 ~~~~~~~~l~~~~~dg~i~~~d~~~-----~~~~~~~~~--~~~~v~~~-~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 193 YPLPDKPYMITASDDLTIKIWDYQT-----KSCVATLEG--HMSNVSFA-VFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp CCSTTCCEEEEECTTSEEEEEETTT-----TEEEEEEEC--CSSCEEEE-EECSSSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEECCC-----CcEEEEEcC--CCCCEEEE-EEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 2 566666666778899995533 223333322 12223334 55667776666654 559999999876554
Q ss_pred e
Q 018593 327 M 327 (353)
Q Consensus 327 v 327 (353)
.
T Consensus 265 ~ 265 (814)
T 3mkq_A 265 T 265 (814)
T ss_dssp E
T ss_pred E
Confidence 4
No 178
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=51.70 E-value=1.6e+02 Score=27.73 Aligned_cols=97 Identities=16% Similarity=0.213 Sum_probs=58.1
Q ss_pred CEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceee
Q 018593 219 SFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIF 297 (353)
Q Consensus 219 ~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~ 297 (353)
..|..+|+.+.+.... +..+.. .-..+... +|++.+.+..+..+.+|.+.. . ..+..+.. ...+..+
T Consensus 541 ~~v~vwd~~~~~~~~~-~~~h~~--~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~---~--~~~~~~~~---~~~v~~~- 608 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRST-LAGHTG--YVSTVAVSPDGSLCASGGKDGVVLLWDLAE---G--KKLYSLEA---NSVIHAL- 608 (694)
T ss_dssp SCEEEEETTTCCEEEE-ECCCSS--CEEEEEECTTSSEEEEEETTSBCEEEETTT---T--EEEECCBC---SSCEEEE-
T ss_pred CeEEEEECCCCcEEEE-EcCCCC--CEEEEEEeCCCCEEEEEeCCCeEEEEECCC---C--ceEEEecC---CCcEEEE-
Confidence 5888999988765432 211110 12233333 477766666788999996643 2 23333332 1123344
Q ss_pred eeecCCcEEEEEeCCcEEEEECCCCeEEEe
Q 018593 298 PISQTREYVFLATHKQVLVYHRNGRLWKEM 327 (353)
Q Consensus 298 ~~~~~~~~v~~~~~~~~~~yd~~~~~~~~v 327 (353)
++..++.++.....+.+.+||+++++....
T Consensus 609 ~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~ 638 (694)
T 3dm0_A 609 CFSPNRYWLCAATEHGIKIWDLESKSIVED 638 (694)
T ss_dssp EECSSSSEEEEEETTEEEEEETTTTEEEEE
T ss_pred EEcCCCcEEEEEcCCCEEEEECCCCCChhh
Confidence 666778866666777799999999876543
No 179
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=51.51 E-value=1.3e+02 Score=26.72 Aligned_cols=111 Identities=15% Similarity=0.132 Sum_probs=63.0
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEee-CCCC----CCCC----CceeEEEE--CCEEEEEEec-------CCeEEEEEE
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKIS-LPDK----VGSE----SRSYLLEC--DGCLSVIEIS-------DEWMETWVL 270 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~~-~P~~----~~~~----~~~~l~~~--~g~L~~v~~~-------~~~~~vw~l 270 (353)
+.+|+.... ..+.++|..++.-..+. .+.. .... ....+... +++||+.... ...-.|+++
T Consensus 277 ~~~~~~s~~-g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVI 355 (426)
T 3c75_H 277 GRLVWPTYT-GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVL 355 (426)
T ss_dssp CEEEEEBTT-SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CEEEEEeCC-CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEE
Confidence 445665554 37888888766544431 1100 0000 00112222 3678877541 124578888
Q ss_pred ecCCCCCeEEEEeeccccccCccceeeeeecCCc-EEEEEe--CCcEEEEECCCCeEEEe
Q 018593 271 KDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTRE-YVFLAT--HKQVLVYHRNGRLWKEM 327 (353)
Q Consensus 271 ~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~~--~~~~~~yd~~~~~~~~v 327 (353)
+- ..+..+.+++.... ...+ .+..+|+ .+|+.. .+.+.++|.++.+..+-
T Consensus 356 D~---~T~kvv~~I~vg~~---P~gi-a~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 356 NA---ETGERINKIELGHE---IDSI-NVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp ET---TTCCEEEEEEEEEE---ECEE-EECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EC---CCCeEEEEEECCCC---cCeE-EEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 54 55677788876431 2234 5667777 677766 35599999999887644
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=51.29 E-value=1.5e+02 Score=27.42 Aligned_cols=196 Identities=11% Similarity=0.024 Sum_probs=100.7
Q ss_pred CeeEEeeecCCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcce
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFK 173 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (353)
++++++.. ...+.+.|+|+.|++... ++-...+ +++.+++.. .| +++.+ . ...
T Consensus 166 ~~~~~V~~-~~~~~V~viD~~t~~v~~~i~~g~~p-------------~~v~~SpDG-r~-lyv~~--------~--dg~ 219 (567)
T 1qks_A 166 ENLFSVTL-RDAGQIALIDGSTYEIKTVLDTGYAV-------------HISRLSASG-RY-LFVIG--------R--DGK 219 (567)
T ss_dssp GGEEEEEE-TTTTEEEEEETTTCCEEEEEECSSCE-------------EEEEECTTS-CE-EEEEE--------T--TSE
T ss_pred CceEEEEe-CCCCeEEEEECCCCeEEEEEeCCCCc-------------cceEECCCC-CE-EEEEc--------C--CCe
Confidence 34555554 567899999999987664 4422211 145555432 22 33321 1 337
Q ss_pred EEEEEcC--CCcEEEeeeccccceeeeeecCceEEE-----cc-eEEeeecCCCEEEEEECCCceE-EEeeCCCCCCC--
Q 018593 174 CLVFDSE--SNRWRKFVSVQDYYQFSIMNRNQVVFV-----NG-ALHWLTDSCSFILALDLEGDVW-RKISLPDKVGS-- 242 (353)
Q Consensus 174 ~~vy~s~--~~~W~~~~~~~~~~~~~~~~~~~~v~~-----~g-~ly~~~~~~~~i~~~D~~~~~~-~~~~~P~~~~~-- 242 (353)
+.+||.. ++ +.... . +.+... ....+- +| .+|........+.++|..+.+- ..++......+
T Consensus 220 V~viD~~~~t~--~~v~~---i-~~G~~P-~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~ 292 (567)
T 1qks_A 220 VNMIDLWMKEP--TTVAE---I-KIGSEA-RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQ 292 (567)
T ss_dssp EEEEETTSSSC--CEEEE---E-ECCSEE-EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTC
T ss_pred EEEEECCCCCC--cEeEE---E-ecCCCC-ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccc
Confidence 8899985 43 22211 1 111111 111222 45 4555555446899999887553 33344321100
Q ss_pred ----C-CceeEEEEC-CEEEEEEe-cCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--Cc
Q 018593 243 ----E-SRSYLLECD-GCLSVIEI-SDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQ 313 (353)
Q Consensus 243 ----~-~~~~l~~~~-g~L~~v~~-~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~ 313 (353)
. ....++.+. +..+++.. ... .||.+ ++......++..++... ....+ .+..+|+.+++... +.
T Consensus 293 ~~~p~~rva~i~~s~~~~~~vv~~~~~g--~v~~v-d~~~~~~~~v~~i~~~~---~~~d~-~~~pdgr~~~va~~~sn~ 365 (567)
T 1qks_A 293 EYHPEPRVAAILASHYRPEFIVNVKETG--KILLV-DYTDLNNLKTTEISAER---FLHDG-GLDGSHRYFITAANARNK 365 (567)
T ss_dssp CEESCCCEEEEEECSSSSEEEEEETTTT--EEEEE-ETTCSSEEEEEEEECCS---SEEEE-EECTTSCEEEEEEGGGTE
T ss_pred cccCCCceEEEEEcCCCCEEEEEecCCC--eEEEE-ecCCCccceeeeeeccc---cccCc-eECCCCCEEEEEeCCCCe
Confidence 0 112333333 45555555 333 34544 33333445555555421 12234 67778886766653 45
Q ss_pred EEEEECCCCeEEEeeee
Q 018593 314 VLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 314 ~~~yd~~~~~~~~v~~~ 330 (353)
+.++|.++++......+
T Consensus 366 V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 366 LVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCcEEEEEec
Confidence 99999999988766555
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=50.59 E-value=1.6e+02 Score=27.34 Aligned_cols=111 Identities=14% Similarity=-0.011 Sum_probs=64.2
Q ss_pred cceEEeeecCCCEEEEEECCCceE-EEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 208 NGALHWLTDSCSFILALDLEGDVW-RKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~-~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
++.+|........+..+|..+.+. ..++..... ..+..+ +|+..++......+.+|.+.. + .-..+.+++
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p-----~~v~~SpDGr~lyv~~~dg~V~viD~~~-~--t~~~v~~i~ 237 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAV-----HISRLSASGRYLFVIGRDGKVNMIDLWM-K--EPTTVAEIK 237 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCE-----EEEEECTTSCEEEEEETTSEEEEEETTS-S--SCCEEEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCc-----cceEECCCCCEEEEEcCCCeEEEEECCC-C--CCcEeEEEe
Confidence 566777766667999999998754 334443322 233333 466555555555666664320 1 113455665
Q ss_pred cccccCccceeeeee----cCCcEEEEEeC--CcEEEEECCCCeEEEeeee
Q 018593 286 LRCIKGMVPSIFPIS----QTREYVFLATH--KQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 286 ~~~~~~~~~~~~~~~----~~~~~v~~~~~--~~~~~yd~~~~~~~~v~~~ 330 (353)
... ....+ .+. .+|+.+++..+ +.+.++|.+|.+.......
T Consensus 238 ~G~---~P~~i-a~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 238 IGS---EARSI-ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp CCS---EEEEE-EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred cCC---CCcee-EEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence 421 12334 556 37877777654 4589999999877665443
No 182
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=50.52 E-value=1.1e+02 Score=25.49 Aligned_cols=109 Identities=14% Similarity=0.093 Sum_probs=59.6
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
+|.....+..+..|..+|+.+.+.... +..... .-..+... +|++.+.+..+..+.+|.++. .. ....+.
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~-~~~h~~--~v~~l~~spd~~~l~s~s~dg~i~iwd~~~---~~--~~~~~~- 245 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHT-LEGHAM--PIRSLTFSPDSQLLVTASDDGYIKIYDVQH---AN--LAGTLS- 245 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEE-ECCCSS--CCCEEEECTTSCEEEEECTTSCEEEEETTT---CC--EEEEEC-
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEE-EcccCC--ceeEEEEcCCCCEEEEEcCCCeEEEEECCC---cc--eeEEEc-
Confidence 354444444445888999988764322 221110 11233333 466666555778899996643 22 222222
Q ss_pred ccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 287 RCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
+....+..+ .+..++..++.... +.+.+||+++++....
T Consensus 246 -~h~~~v~~~-~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 246 -GHASWVLNV-AFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp -CCSSCEEEE-EECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred -CCCCceEEE-EECCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Confidence 222223334 55667775665554 4599999998865443
No 183
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=49.59 E-value=1.1e+02 Score=28.69 Aligned_cols=130 Identities=10% Similarity=-0.025 Sum_probs=76.5
Q ss_pred EcceEEeeecC-CCEEEEEECCCceE----------EEe-eCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEec-
Q 018593 207 VNGALHWLTDS-CSFILALDLEGDVW----------RKI-SLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKD- 272 (353)
Q Consensus 207 ~~g~ly~~~~~-~~~i~~~D~~~~~~----------~~~-~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~- 272 (353)
-+|+..+++.. ...+.+||..+..- ... .++... ....+.-. +|.+|+...-+..+.+|.++.
T Consensus 286 PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~---gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a 362 (595)
T 1fwx_A 286 PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL---GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDA 362 (595)
T ss_dssp TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS---CEEEEEECTTSEEEEEETTTTEEEEEEHHHH
T ss_pred CCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC---CcceEEECCCCeEEEEEecCCcEEEEEhhHh
Confidence 35764444443 36899999996520 111 333333 23344443 376666665778899998765
Q ss_pred ---C-CCCCeEEEEeeccc---cccCccceeeeeecCCcEEEEEeC---CcE-----------EEEECCCCeEEEeeeec
Q 018593 273 ---Y-YRDEWHSVDKVSLR---CIKGMVPSIFPISQTREYVFLATH---KQV-----------LVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 273 ---~-~~~~W~~~~~i~~~---~~~~~~~~~~~~~~~~~~v~~~~~---~~~-----------~~yd~~~~~~~~v~~~~ 331 (353)
+ +...+..+.+++.. +........ ....+|+.++.... +++ .+||+.+++++.+.+..
T Consensus 363 ~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~-t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p 441 (595)
T 1fwx_A 363 IRAYAGEKVDPIKDKLDVHYQPGHLKTVMGE-TLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGP 441 (595)
T ss_dssp HHHHHTCSCCCEEEEEECSSCEEEEEETTTT-STTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEE
T ss_pred hhhhcccccceeEEEeecccccccceeccce-EeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEc
Confidence 1 22446777778763 222211222 34568887776543 223 89999999999998776
Q ss_pred cCccccceEE
Q 018593 332 YGSTLPLWFS 341 (353)
Q Consensus 332 ~~~~~~~~~~ 341 (353)
- ...|+.+.
T Consensus 442 ~-~~ePh~~~ 450 (595)
T 1fwx_A 442 T-FAEPHDAI 450 (595)
T ss_dssp E-SSCCCCEE
T ss_pred C-CCCCCceE
Confidence 4 34555443
No 184
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=49.43 E-value=1.1e+02 Score=25.33 Aligned_cols=107 Identities=14% Similarity=0.027 Sum_probs=59.1
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
|.+...+..+..|..+|+.+.+.... +..... .-..+... +|.+.+.+..+..+.+|.++. . ..+..+..
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~--~~~~~~~~ 156 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKH-YVGHGN--AINELKFHPRDPNLLLSVSKDHALRLWNIQT---D--TLVAIFGG 156 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEE-EESCCS--CEEEEEECSSCTTEEEEEETTSCEEEEETTT---T--EEEEEECS
T ss_pred CCEEEEecCCCEEEEEEchhceEeee-ecCCCC--cEEEEEECCCCCCEEEEEeCCCeEEEEEeec---C--eEEEEecc
Confidence 44555555545899999887654322 111110 12223332 567766666778899996643 2 23333321
Q ss_pred -ccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeE
Q 018593 287 -RCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLW 324 (353)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~ 324 (353)
......+..+ .+..++..++.... +.+.+||+++++.
T Consensus 157 ~~~~~~~v~~~-~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 195 (366)
T 3k26_A 157 VEGHRDEVLSA-DYDLLGEKIMSCGMDHSLKLWRINSKRM 195 (366)
T ss_dssp TTSCSSCEEEE-EECTTSSEEEEEETTSCEEEEESCSHHH
T ss_pred cccccCceeEE-EECCCCCEEEEecCCCCEEEEECCCCcc
Confidence 2222223344 55567776666554 4599999998653
No 185
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=49.21 E-value=1.3e+02 Score=25.89 Aligned_cols=200 Identities=15% Similarity=0.141 Sum_probs=94.9
Q ss_pred cCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcce
Q 018593 94 CNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFK 173 (353)
Q Consensus 94 ~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (353)
.+|-.++.. .....+.|||..+++....-... ..... .+.+.+.. . .++..+ ....
T Consensus 133 ~dg~~l~s~-~~d~~i~iwd~~~~~~~~~~~~h--------~~~v~---~~~~~p~~-~-~l~s~s----------~d~~ 188 (393)
T 1erj_A 133 PDGKFLATG-AEDRLIRIWDIENRKIVMILQGH--------EQDIY---SLDYFPSG-D-KLVSGS----------GDRT 188 (393)
T ss_dssp TTSSEEEEE-ETTSCEEEEETTTTEEEEEECCC--------SSCEE---EEEECTTS-S-EEEEEE----------TTSE
T ss_pred CCCCEEEEE-cCCCeEEEEECCCCcEEEEEccC--------CCCEE---EEEEcCCC-C-EEEEec----------CCCc
Confidence 355544443 35578999999888755432111 11122 45555432 2 333321 1457
Q ss_pred EEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCCCEEEEEECCCceEEE-eeCCCCC-CCC--Cce
Q 018593 174 CLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSCSFILALDLEGDVWRK-ISLPDKV-GSE--SRS 246 (353)
Q Consensus 174 ~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~~~i~~~D~~~~~~~~-~~~P~~~-~~~--~~~ 246 (353)
+.+||.+++.-...-..... .. .+.+ +|.+...+..+..|..+|+.+..... +..+... ... .-.
T Consensus 189 v~iwd~~~~~~~~~~~~~~~-v~-------~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 189 VRIWDLRTGQCSLTLSIEDG-VT-------TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY 260 (393)
T ss_dssp EEEEETTTTEEEEEEECSSC-EE-------EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEE
T ss_pred EEEEECCCCeeEEEEEcCCC-cE-------EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEE
Confidence 88999888754332111111 01 1111 45555555444588899998865432 2221111 000 122
Q ss_pred eEEEE-CCEEEEEEecCCeEEEEEEecCCC-CCeEE----EEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEEC
Q 018593 247 YLLEC-DGCLSVIEISDEWMETWVLKDYYR-DEWHS----VDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHR 319 (353)
Q Consensus 247 ~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~-~~W~~----~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~ 319 (353)
.+... +|++.+.+..+..+.+|.++.... ..... .......+....+..+ .+..++..++.... +.+.+||.
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV-ATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEE-EECGGGCEEEEEETTSEEEEEET
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEE-EECCCCCEEEEEeCCCeEEEEEC
Confidence 23333 466666555788999998754321 00000 0000111222223334 45567775555554 44999999
Q ss_pred CCCeEEE
Q 018593 320 NGRLWKE 326 (353)
Q Consensus 320 ~~~~~~~ 326 (353)
++++-..
T Consensus 340 ~~~~~~~ 346 (393)
T 1erj_A 340 KSGNPLL 346 (393)
T ss_dssp TTCCEEE
T ss_pred CCCeEEE
Confidence 9886543
No 186
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=48.13 E-value=1.3e+02 Score=25.73 Aligned_cols=193 Identities=6% Similarity=-0.026 Sum_probs=93.5
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
+.+|-.++.. ...+.+.|||..+++......... .... .+.+.+.. . .++..+ ...
T Consensus 106 ~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~h~--------~~v~---~~~~~~~~-~-~l~s~s----------~d~ 161 (420)
T 3vl1_A 106 KLQMRRFILG-TTEGDIKVLDSNFNLQREIDQAHV--------SEIT---KLKFFPSG-E-ALISSS----------QDM 161 (420)
T ss_dssp CSSSCEEEEE-ETTSCEEEECTTSCEEEEETTSSS--------SCEE---EEEECTTS-S-EEEEEE----------TTS
T ss_pred ecCCCEEEEE-ECCCCEEEEeCCCcceeeeccccc--------CccE---EEEECCCC-C-EEEEEe----------CCC
Confidence 3345444433 355689999998887665432211 1122 45665532 2 233221 145
Q ss_pred eEEEEEcCCCcE-EEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEE
Q 018593 173 KCLVFDSESNRW-RKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLE 250 (353)
Q Consensus 173 ~~~vy~s~~~~W-~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~ 250 (353)
.+.+|+..++.= +........ -.... ..-+|.....+..+..+..+|+.+.+-... ..+..... .-..+..
T Consensus 162 ~i~iwd~~~~~~~~~~~~h~~~-v~~~~-----~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~ 234 (420)
T 3vl1_A 162 QLKIWSVKDGSNPRTLIGHRAT-VTDIA-----IIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHD-GVNSIAL 234 (420)
T ss_dssp EEEEEETTTCCCCEEEECCSSC-EEEEE-----EETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTC-CEEEEEE
T ss_pred eEEEEeCCCCcCceEEcCCCCc-EEEEE-----EcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCC-CccEEEE
Confidence 788999876531 111000000 01111 111344444444435799999987754332 32211110 0111111
Q ss_pred ----------------------ECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCc-EEE
Q 018593 251 ----------------------CDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTRE-YVF 307 (353)
Q Consensus 251 ----------------------~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~ 307 (353)
-+|++.+++..+..+.+|.+.. .. ....+.. .....+..+ .+..++. +++
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~--~~~~~~~-~~~~~v~~~-~~~~~~~~~l~ 307 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS---KE--QTIQLPS-KFTCSCNSL-TVDGNNANYIY 307 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT---CC--EEEEECC-TTSSCEEEE-EECSSCTTEEE
T ss_pred ecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC---Cc--eeEEccc-ccCCCceeE-EEeCCCCCEEE
Confidence 2567766666778899996633 21 2222322 112223334 4555665 566
Q ss_pred EEeC-CcEEEEECCCCe
Q 018593 308 LATH-KQVLVYHRNGRL 323 (353)
Q Consensus 308 ~~~~-~~~~~yd~~~~~ 323 (353)
.... +.+.+||+++++
T Consensus 308 ~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 308 AGYENGMLAQWDLRSPE 324 (420)
T ss_dssp EEETTSEEEEEETTCTT
T ss_pred EEeCCCeEEEEEcCCCc
Confidence 6654 459999999864
No 187
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=47.45 E-value=1.4e+02 Score=25.70 Aligned_cols=105 Identities=8% Similarity=-0.059 Sum_probs=57.4
Q ss_pred eEEeeec--CCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CCEEEEEE-e-cCCeEEEEEEecCCCCCeEEEEe
Q 018593 210 ALHWLTD--SCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DGCLSVIE-I-SDEWMETWVLKDYYRDEWHSVDK 283 (353)
Q Consensus 210 ~ly~~~~--~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g~L~~v~-~-~~~~~~vw~l~~~~~~~W~~~~~ 283 (353)
.+...+. ....|..+|+.+.+.... ..+. .-..+... +|+..++. + .+..+.+|.+.. ........
T Consensus 273 ~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~---~~~~~~~~ 344 (401)
T 4aez_A 273 NLLATGGGTMDKQIHFWNAATGARVNTVDAGS-----QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS---SGLTKQVD 344 (401)
T ss_dssp TEEEEECCTTTCEEEEEETTTCCEEEEEECSS-----CEEEEEECSSSSEEEEEECTTTCEEEEEEEET---TEEEEEEE
T ss_pred CEEEEecCCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEEECCCCCeEEEEeecCCCcEEEEecCC---ccceeEEE
Confidence 3444443 235888999887654332 3221 12223332 46655554 3 678999998865 34444444
Q ss_pred eccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEE
Q 018593 284 VSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWK 325 (353)
Q Consensus 284 i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~ 325 (353)
+.. ....+..+ .+..++..++..+. +.+.+||+++++..
T Consensus 345 ~~~--h~~~v~~~-~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 345 IPA--HDTRVLYS-ALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEC--CSSCCCEE-EECTTSSEEEEECTTSEEEEEECCC----
T ss_pred ecC--CCCCEEEE-EECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 432 22223344 56678886666654 44999999987644
No 188
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=47.35 E-value=1.9e+02 Score=27.36 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=23.1
Q ss_pred eEEEcceEEeeecCCCEEEEEECCCc--eEEEe
Q 018593 204 VVFVNGALHWLTDSCSFILALDLEGD--VWRKI 234 (353)
Q Consensus 204 ~v~~~g~ly~~~~~~~~i~~~D~~~~--~~~~~ 234 (353)
.++.+|.+|.-+... .+.++|..++ .|+.-
T Consensus 113 ~~~~~~~v~v~~~dg-~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 113 VALWGDKVYVGTLDG-RLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp CEEEBTEEEEECTTS-EEEEEETTTCCEEEEEE
T ss_pred eEEECCEEEEEcCCC-EEEEEECCCCCEeeeec
Confidence 567889999887664 9999998775 47654
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=47.19 E-value=1.1e+02 Score=24.79 Aligned_cols=106 Identities=9% Similarity=0.068 Sum_probs=55.4
Q ss_pred cc-eEEeeecCCCEEEEEECC-CceEEE----eeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEE
Q 018593 208 NG-ALHWLTDSCSFILALDLE-GDVWRK----ISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHS 280 (353)
Q Consensus 208 ~g-~ly~~~~~~~~i~~~D~~-~~~~~~----~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~ 280 (353)
+| .+|+.......|..||+. ++++.. ..+|..... ....+... +|+|++.......+.+| +.++.+-..
T Consensus 186 dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~-~p~~i~~d~~G~l~v~~~~~~~i~~~---d~~~g~~~~ 261 (314)
T 1pjx_A 186 RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG-GADGMDFDEDNNLLVANWGSSHIEVF---GPDGGQPKM 261 (314)
T ss_dssp CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC-EEEEEEEBTTCCEEEEEETTTEEEEE---CTTCBSCSE
T ss_pred CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCC-CCCceEECCCCCEEEEEcCCCEEEEE---cCCCCcEeE
Confidence 35 466665444589999976 444322 134422100 12234443 58888877655666666 322111111
Q ss_pred EEeeccccccCccceeeeeecCCcEEEEEeCC--cEEEEECCCC
Q 018593 281 VDKVSLRCIKGMVPSIFPISQTREYVFLATHK--QVLVYHRNGR 322 (353)
Q Consensus 281 ~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~yd~~~~ 322 (353)
....+. .....+ .+..++..+++.... .+..||+++.
T Consensus 262 ~~~~~~----~~~~~i-~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 262 RIRCPF----EKPSNL-HFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEECSS----SCEEEE-EECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEeCCC----CCceeE-EECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 112221 112233 456677767777655 6999998764
No 190
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=46.47 E-value=80 Score=27.15 Aligned_cols=59 Identities=5% Similarity=0.051 Sum_probs=36.1
Q ss_pred cceEEEEEcCCCcEEEeeecccccee-eeeecCceEE-------EcceEEeeecCCCEEEEEECCCce
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQF-SIMNRNQVVF-------VNGALHWLTDSCSFILALDLEGDV 230 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~-~~~~~~~~v~-------~~g~ly~~~~~~~~i~~~D~~~~~ 230 (353)
.-.+..++..+|.|+-..+.+.+... ..+....+|. .+|.+|.-...+ .+.++|..+++
T Consensus 66 dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g-~l~ald~~tG~ 132 (339)
T 2be1_A 66 DGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRT-IMYTINMLNGE 132 (339)
T ss_dssp TTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEE-EEEEEETTTCC
T ss_pred CCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCC-EEEEEECCCCc
Confidence 55677788888877644332222000 1222344555 789999988876 99999999875
No 191
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=46.14 E-value=1.5e+02 Score=25.71 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=42.4
Q ss_pred CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC-cEEEEECCCCeEEEee
Q 018593 252 DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK-QVLVYHRNGRLWKEMY 328 (353)
Q Consensus 252 ~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~yd~~~~~~~~v~ 328 (353)
+|.+.+++..+..+.+|.+.. .+ .+..+........+..+ .+..++..++..... .+.+||+++++.....
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~---~~--~~~~~~~~~h~~~v~~~-~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRT---LE--RLQIIENSPRHGAVSSI-CIDEECCVLILGTTRGIIDIWDIRFNVLIRSW 252 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTT---CC--EEEEEECCGGGCCEEEE-EECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCC---Ce--eeEEEccCCCCCceEEE-EECCCCCEEEEEcCCCeEEEEEcCCccEEEEE
Confidence 466666666778999996643 22 23333321122233344 566678866666554 4999999998765543
No 192
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=46.08 E-value=1.3e+02 Score=24.93 Aligned_cols=109 Identities=12% Similarity=0.111 Sum_probs=57.6
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEE-E---CCEEEEEEecCCeEEEEEEecCCCCCeEEEEe
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLE-C---DGCLSVIEISDEWMETWVLKDYYRDEWHSVDK 283 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~-~---~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~ 283 (353)
|.....+..+..|..+|+.++....+ .+..+. ....-+. . +|++.+.+..+..+.+|.++. ..|.....
T Consensus 25 g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~---~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~---~~~~~~~~ 98 (316)
T 3bg1_A 25 GTRLATCSSDRSVKIFDVRNGGQILIADLRGHE---GPVWQVAWAHPMYGNILASCSYDRKVIIWREEN---GTWEKSHE 98 (316)
T ss_dssp GCEEEEEETTTEEEEEEEETTEEEEEEEEECCS---SCEEEEEECCGGGSSCEEEEETTSCEEEECCSS---SCCCEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCC---ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC---CcceEEEE
Confidence 44434444335788888877654332 333222 1222222 2 266666566778899996533 45666554
Q ss_pred eccccccCccceeeeeecC--CcEEEEEe-CCcEEEEECCCC-eEEE
Q 018593 284 VSLRCIKGMVPSIFPISQT--REYVFLAT-HKQVLVYHRNGR-LWKE 326 (353)
Q Consensus 284 i~~~~~~~~~~~~~~~~~~--~~~v~~~~-~~~~~~yd~~~~-~~~~ 326 (353)
+.- ....+..+ .+..+ +.++.... ++.+.+||++++ .|+.
T Consensus 99 ~~~--h~~~V~~v-~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 99 HAG--HDSSVNSV-CWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp ECC--CSSCCCEE-EECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred ccC--CCCceEEE-EECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 432 22223333 34333 55444444 345999999876 4643
No 193
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=45.80 E-value=10 Score=21.66 Aligned_cols=15 Identities=20% Similarity=0.454 Sum_probs=10.3
Q ss_pred CCCHHHHHHHHhcCC
Q 018593 3 FFPDEVIQQILARLP 17 (353)
Q Consensus 3 ~LP~dll~~IL~rLp 17 (353)
.||.|+.+|||+--.
T Consensus 23 ~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 23 QLPADIQEEILSGKS 37 (48)
T ss_dssp TSCHHHHHHHTTCCC
T ss_pred HCcHHHHHHHHhcch
Confidence 577777777776543
No 194
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=45.69 E-value=1.5e+02 Score=25.68 Aligned_cols=61 Identities=16% Similarity=0.133 Sum_probs=32.9
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEe
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLK 271 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~ 271 (353)
+|.....+..+..|..+|+.++..... +..... .-..+... +|.+.+.+..+..+.+|.+.
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~-~~~h~~--~v~~~~~~~~g~~l~s~s~D~~v~vwd~~ 264 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKT-FTGHRE--WVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEE-EECCSS--CEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEE-EeCCCc--cEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 344444444445899999988753222 111110 11222222 46766666677889999653
No 195
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=45.66 E-value=1.5e+02 Score=25.77 Aligned_cols=108 Identities=6% Similarity=0.007 Sum_probs=54.5
Q ss_pred EEeeecCCCEEEEEECCCce--EEEeeCCCCCCCCCceeEEEE-CC-EEEEEEecCCeEEEEEEecCCCCC---------
Q 018593 211 LHWLTDSCSFILALDLEGDV--WRKISLPDKVGSESRSYLLEC-DG-CLSVIEISDEWMETWVLKDYYRDE--------- 277 (353)
Q Consensus 211 ly~~~~~~~~i~~~D~~~~~--~~~~~~P~~~~~~~~~~l~~~-~g-~L~~v~~~~~~~~vw~l~~~~~~~--------- 277 (353)
++..+.....|..||+.+.. ...+.. ... .-..+... +| .+++.+..+..+.||.+...+...
T Consensus 292 ~l~tg~~dg~v~vwd~~~~~~~~~~~~~--h~~--~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 292 ILATGSADKTVALWDLRNLKLKLHSFES--HKD--EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp EEEEEETTSEEEEEETTCTTSCSEEEEC--CSS--CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred EEEEEeCCCeEEEEeCCCCCCCeEEeec--CCC--CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCC
Confidence 55555554689999988732 222211 110 12223332 24 456666677889999886533110
Q ss_pred eEEEEeeccccccCccceeeeeecCCc-EEEEEeC-CcEEEEECCCCeEE
Q 018593 278 WHSVDKVSLRCIKGMVPSIFPISQTRE-YVFLATH-KQVLVYHRNGRLWK 325 (353)
Q Consensus 278 W~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~-~~~~~yd~~~~~~~ 325 (353)
-.++.... +....+..+ .+..++. +++.... +.+.+|++.++.+.
T Consensus 368 ~~~~~~~~--~h~~~v~~~-~~~p~~~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 368 PELLFIHG--GHTAKISDF-SWNPNEPWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp TTEEEECC--CCSSCEEEE-EECSSSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred cceEEEcC--CCCCCceEE-EECCCCCCEEEEEECCCCEEEeEccccccc
Confidence 01111111 122223334 4555665 4554443 44899999876554
No 196
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=45.54 E-value=1.3e+02 Score=25.03 Aligned_cols=205 Identities=10% Similarity=0.052 Sum_probs=94.4
Q ss_pred ecCeeEEeeecCCCceEEEEccccc--ceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCC
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTR--EWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDG 170 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~--~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 170 (353)
..+|-+++.. .....+.++|+..+ ....+....... ..........++.+++..+. +++.. ...
T Consensus 99 d~~g~l~v~d-~~~~~v~~~~~~g~~~~~~~~~~~~~~g---~~~~~~~~P~~ia~~~~~g~--lyv~d--------~~~ 164 (329)
T 3fvz_A 99 DTDGNYWVTD-VALHQVFKLDPHSKEGPLLILGRSMQPG---SDQNHFCQPTDVAVEPSTGA--VFVSD--------GYC 164 (329)
T ss_dssp CTTSCEEEEE-TTTTEEEEECTTCSSCCSEEESBTTBCC---CSTTCCSSEEEEEECTTTCC--EEEEE--------CSS
T ss_pred CCCCCEEEEE-CCCCEEEEEeCCCCeEEEEEecccCCCC---CCccccCCCcEEEEeCCCCe--EEEEe--------CCC
Confidence 3466666654 45578889998665 333343221110 00000111116777763222 33321 012
Q ss_pred cceEEEEEcCCCcE-EEeeecccc--ceeeeeecCceEEE--c-ceEEeeecCCCEEEEEECCCceEE-EeeCCCCCCCC
Q 018593 171 TFKCLVFDSESNRW-RKFVSVQDY--YQFSIMNRNQVVFV--N-GALHWLTDSCSFILALDLEGDVWR-KISLPDKVGSE 243 (353)
Q Consensus 171 ~~~~~vy~s~~~~W-~~~~~~~~~--~~~~~~~~~~~v~~--~-g~ly~~~~~~~~i~~~D~~~~~~~-~~~~P~~~~~~ 243 (353)
...+.+|+. ++.. ......... ..........++.+ + |.+|+.......|..||+.++++. .+..+....
T Consensus 165 ~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~-- 241 (329)
T 3fvz_A 165 NSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGR-- 241 (329)
T ss_dssp CCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTT--
T ss_pred CCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCC--
Confidence 557888884 3433 222110000 00011111224555 3 889988776678999999966553 334443221
Q ss_pred CceeEEEECCEEEEEEe-------cCCeEEEEEEecCCCCCeEEEEeecc-ccccCccceeeeeecCCcEEEEEe--CCc
Q 018593 244 SRSYLLECDGCLSVIEI-------SDEWMETWVLKDYYRDEWHSVDKVSL-RCIKGMVPSIFPISQTREYVFLAT--HKQ 313 (353)
Q Consensus 244 ~~~~l~~~~g~L~~v~~-------~~~~~~vw~l~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~~~~~~v~~~~--~~~ 313 (353)
....+....|.++.... ....+.+|.++. .+. +..+.. .........+ ++..+|. +++.. .++
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~---g~~--~~~~~~~~~~~~~p~~i-a~~~dG~-lyvad~~~~~ 314 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS---GEI--IDVFKPVRKHFDMPHDI-VASEDGT-VYIGDAHTNT 314 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT---CCE--EEEECCSSSCCSSEEEE-EECTTSE-EEEEESSSCC
T ss_pred CcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC---CeE--EEEEcCCCCccCCeeEE-EECCCCC-EEEEECCCCE
Confidence 12233333455555443 233556664322 332 233332 1111223345 6677776 55543 234
Q ss_pred EEEEECCC
Q 018593 314 VLVYHRNG 321 (353)
Q Consensus 314 ~~~yd~~~ 321 (353)
|..||++.
T Consensus 315 I~~~~~~~ 322 (329)
T 3fvz_A 315 VWKFTLTE 322 (329)
T ss_dssp EEEEEEEE
T ss_pred EEEEeCCc
Confidence 88887754
No 197
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=44.69 E-value=1.8e+02 Score=26.37 Aligned_cols=185 Identities=10% Similarity=0.024 Sum_probs=0.0
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTF 172 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 172 (353)
+.+|.+++. .....+.+|+..+++....-..... .. .+.+. +.+-+.. .....
T Consensus 415 s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~~~---~~~l~~~----------~~~d~ 467 (615)
T 1pgu_A 415 NNDGFTAVL--TNDDDLLILQSFTGDIIKSVRLNSP---------GS---AVSLS---QNYVAVG----------LEEGN 467 (615)
T ss_dssp CSSSEEEEE--ETTSEEEEEETTTCCEEEEEECSSC---------EE---EEEEC---SSEEEEE----------ETTTS
T ss_pred cCCCCEEEE--eCCCceEEEeccCCceeeecccCCC---------ce---EEEEc---CCEEEEe----------ecCCC
Q ss_pred eEEEEEcCCCcEE-EeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEE
Q 018593 173 KCLVFDSESNRWR-KFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLL 249 (353)
Q Consensus 173 ~~~vy~s~~~~W~-~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~ 249 (353)
.+.+|+..++... .. .......-..+.+ +|.+...+..+..|..||+.+.+-...-..... ....-+
T Consensus 468 ~i~~~~~~~~~~~~~~-------~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~---~~v~~~ 537 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDL-------KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRT---SKINAI 537 (615)
T ss_dssp CEEEEETTEEEEEEEC-------SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCS---SCEEEE
T ss_pred eEEEEECCCccccccc-------cCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCC---CceeEE
Q ss_pred EE------------CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCc-EEE
Q 018593 250 EC------------DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQ-VLV 316 (353)
Q Consensus 250 ~~------------~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 316 (353)
.. +|++.+.+..+..+.+|.++... .....+.+....+..+ .+..++. ++...... +.+
T Consensus 538 ~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~h~~~v~~l-~~s~~~~-l~s~~~d~~v~i 609 (615)
T 1pgu_A 538 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM------KIIKALNAHKDGVNNL-LWETPST-LVSSGADACIKR 609 (615)
T ss_dssp EECCCC------CCSCCEEEEEETTSCEEEEESSCTT------CCEEETTSSTTCEEEE-EEEETTE-EEEEETTSCEEE
T ss_pred EEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc------eechhhhcCccceEEE-EEcCCCC-eEEecCCceEEE
Q ss_pred EECCCC
Q 018593 317 YHRNGR 322 (353)
Q Consensus 317 yd~~~~ 322 (353)
||++++
T Consensus 610 w~~~~~ 615 (615)
T 1pgu_A 610 WNVVLE 615 (615)
T ss_dssp EEEC--
T ss_pred EeeecC
No 198
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=44.32 E-value=1.5e+02 Score=25.26 Aligned_cols=107 Identities=12% Similarity=0.062 Sum_probs=56.8
Q ss_pred EEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCCC
Q 018593 143 GLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSCS 219 (353)
Q Consensus 143 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~~ 219 (353)
++.+|+..+ +++... .....+..++...+.-+.... ... ....++.+ +|.|||......
T Consensus 77 ~l~~d~~~~--~ly~~D---------~~~~~I~r~~~~g~~~~~~~~-~~~------~~p~glavd~~~g~ly~~d~~~~ 138 (349)
T 3v64_C 77 ALDFHHRRE--LVFWSD---------VTLDRILRANLNGSNVEEVVS-TGL------ESPGGLAVDWVHDKLYWTDSGTS 138 (349)
T ss_dssp EEEEETTTT--EEEEEE---------TTTTEEEEEETTSCSCEEEEC-SSC------SCCCEEEEETTTTEEEEEETTTT
T ss_pred EEEEecccc--EEEEEe---------ccCCceEEEecCCCCceEEEe-CCC------CCccEEEEecCCCeEEEEcCCCC
Confidence 677776433 444441 224467777776654443311 000 11123343 689999987667
Q ss_pred EEEEEECCCceEEEeeCCCCCCCCCceeEEEE--CCEEEEEEecCCeEEEEEEe
Q 018593 220 FILALDLEGDVWRKISLPDKVGSESRSYLLEC--DGCLSVIEISDEWMETWVLK 271 (353)
Q Consensus 220 ~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw~l~ 271 (353)
.|.++|+....-..+...... ....++.. +|.||+..... .-.|++++
T Consensus 139 ~I~~~~~dG~~~~~l~~~~l~---~P~~iavdp~~g~ly~td~~~-~~~I~r~~ 188 (349)
T 3v64_C 139 RIEVANLDGAHRKVLLWQSLE---KPRAIALHPMEGTIYWTDWGN-TPRIEASS 188 (349)
T ss_dssp EEEEEETTSCSCEEEECTTCS---CEEEEEEETTTTEEEEEECSS-SCEEEEEE
T ss_pred eEEEEcCCCCceEEEEeCCCC---CcceEEEecCcCeEEEeccCC-CCEEEEEe
Confidence 899999987654433211111 23344554 57888776533 12355543
No 199
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=43.81 E-value=1.6e+02 Score=25.49 Aligned_cols=141 Identities=13% Similarity=0.089 Sum_probs=71.8
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
.+.+++. ....+...++.+++...+..... .. .++.+|+..+ +++... .....+
T Consensus 87 ~~~l~~~---~~~~I~~i~~~~~~~~~~~~~~~---------~~---~gl~~d~~~~--~ly~~D---------~~~~~I 140 (386)
T 3v65_B 87 EPVLLFA---NRIDIRQVLPHRSEYTLLLNNLE---------NA---IALDFHHRRE--LVFWSD---------VTLDRI 140 (386)
T ss_dssp CCEEEEE---CBSCEEEECTTSCCCEEEECSCS---------CE---EEEEEETTTT--EEEEEE---------TTTTEE
T ss_pred cceeEee---cCccceeeccCCCcEEEEecCCC---------cc---EEEEEecCCC--eEEEEe---------CCCCcE
Confidence 4555554 23456666666555444322111 11 1677776433 444441 224567
Q ss_pred EEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE
Q 018593 175 LVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC 251 (353)
Q Consensus 175 ~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~ 251 (353)
..++...+..+.... ... ....++.+ +|.|||.......|.++|+....-..+.. .... ....++..
T Consensus 141 ~r~~~~g~~~~~~~~-~~~------~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-~~l~--~P~giavd 210 (386)
T 3v65_B 141 LRANLNGSNVEEVVS-TGL------ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLE--KPRAIALH 210 (386)
T ss_dssp EEEETTSCCEEEEEC-SSC------SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-SSCS--CEEEEEEE
T ss_pred EEEecCCCCcEEEEe-CCC------CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-CCCC--CCcEEEEE
Confidence 777777665544411 001 11123333 58999998766689999988655333321 1110 22344444
Q ss_pred --CCEEEEEEecCCeEEEEEEec
Q 018593 252 --DGCLSVIEISDEWMETWVLKD 272 (353)
Q Consensus 252 --~g~L~~v~~~~~~~~vw~l~~ 272 (353)
+|.||+..... .-.|++++-
T Consensus 211 p~~g~ly~td~~~-~~~I~r~~~ 232 (386)
T 3v65_B 211 PMEGTIYWTDWGN-TPRIEASSM 232 (386)
T ss_dssp TTTTEEEEEECSS-SCEEEEEET
T ss_pred cCCCeEEEeccCC-CCEEEEEeC
Confidence 57888776533 234555543
No 200
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=43.57 E-value=1.4e+02 Score=24.64 Aligned_cols=31 Identities=10% Similarity=0.085 Sum_probs=22.4
Q ss_pred eec-CCcEEEEEeCCcEEEEECCCCeEEEeeee
Q 018593 299 ISQ-TREYVFLATHKQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 299 ~~~-~~~~v~~~~~~~~~~yd~~~~~~~~v~~~ 330 (353)
+.. ++..+++. .+.+..||+++++.......
T Consensus 262 ~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~ 293 (349)
T 1jmx_B 262 RSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANL 293 (349)
T ss_dssp ECSSCTTEEEEE-ESEEEEEETTTTEEEEEEEC
T ss_pred ecCCCCCEEEEE-cCeEEEEECccCeEEEEEcC
Confidence 345 77767766 67799999999887655443
No 201
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=42.14 E-value=2.1e+02 Score=26.48 Aligned_cols=147 Identities=10% Similarity=-0.042 Sum_probs=75.8
Q ss_pred cceEEEEEcC-CCcEEEeeeccccceeeeeecCceE-EEcceEEeeecCC--CEEEEEECCCceEEEe-eCCCCCCC-C-
Q 018593 171 TFKCLVFDSE-SNRWRKFVSVQDYYQFSIMNRNQVV-FVNGALHWLTDSC--SFILALDLEGDVWRKI-SLPDKVGS-E- 243 (353)
Q Consensus 171 ~~~~~vy~s~-~~~W~~~~~~~~~~~~~~~~~~~~v-~~~g~ly~~~~~~--~~i~~~D~~~~~~~~~-~~P~~~~~-~- 243 (353)
...+.+++.. ++.+......... .. ....... .-+|.+|+.+... ..|..+|+.++++..+ +....... .
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~--~~-~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGG--PE-EAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEE--TT-BCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred CcEEEEEEECCCCcccccEEeCCC--CC-ceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence 3578888988 5744333111100 00 0000111 2268888877654 3799999988877665 22111100 0
Q ss_pred --CceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC----cEEE
Q 018593 244 --SRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK----QVLV 316 (353)
Q Consensus 244 --~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~ 316 (353)
....+... +|++++.... ....||.++..+ .. ...+... ......+ ....++.+++..... .++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~-~~---~~~l~~~--~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES-GE---LVDAAGP--WTEWAAT-LTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT-TE---EEECCSS--CCEEEEE-EEEETTEEEEEEEETTEEEEEEE
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCC-Cc---EEEecCC--CCeEEEE-EecCCCEEEEEEcCCCCCCEEEE
Confidence 01234444 5787766667 888999886432 32 2333321 1111111 112244444444332 3889
Q ss_pred EECCCCeEEEee
Q 018593 317 YHRNGRLWKEMY 328 (353)
Q Consensus 317 yd~~~~~~~~v~ 328 (353)
+|+++++.+.+.
T Consensus 365 ~d~~~g~~~~l~ 376 (662)
T 3azo_A 365 LDTVTGRARTIG 376 (662)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCceEEee
Confidence 999999888774
No 202
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=41.76 E-value=1.5e+02 Score=24.61 Aligned_cols=117 Identities=14% Similarity=0.033 Sum_probs=61.6
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEEC---CEEEEEEecCCeEEEEEEecCC---CCCeEEE
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLECD---GCLSVIEISDEWMETWVLKDYY---RDEWHSV 281 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~---g~L~~v~~~~~~~~vw~l~~~~---~~~W~~~ 281 (353)
|.+...+..+..|..+|..++.+..+ .+..... .-..+.... +.+.+.+..+..+.+|.+.... ...|...
T Consensus 165 ~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 165 EALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG--TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC--cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 44444444445788888877766554 3332221 111222222 3333333477899999886432 1456665
Q ss_pred EeeccccccCccceeeeeecCCcEEEEEe-CCcEEEEECCCCeEEEeeee
Q 018593 282 DKVSLRCIKGMVPSIFPISQTREYVFLAT-HKQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 282 ~~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd~~~~~~~~v~~~ 330 (353)
..++.. ....+..+ .+..++. ++... ++.+.+||.++++|+.+...
T Consensus 243 ~~~~~~-h~~~v~~v-~~s~~~~-l~s~~~dg~v~iw~~~~~~~~~~~~~ 289 (330)
T 2hes_X 243 AILPDV-HKRQVYNV-AWGFNGL-IASVGADGVLAVYEEVDGEWKVFAKR 289 (330)
T ss_dssp EECCSC-CSSCEEEE-EECTTSC-EEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred eecccc-cccceEEE-EEcCCCE-EEEEeCCCEEEEEEcCCCceEEEecc
Confidence 554421 12222233 3344444 44444 45599999999988766443
No 203
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=41.33 E-value=2.2e+02 Score=26.45 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=46.6
Q ss_pred ceEEEEEcCCC--cEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCce--EEEeeCCCCCCCCCcee
Q 018593 172 FKCLVFDSESN--RWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDV--WRKISLPDKVGSESRSY 247 (353)
Q Consensus 172 ~~~~vy~s~~~--~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~--~~~~~~P~~~~~~~~~~ 247 (353)
-.+..+|..++ .|+.. ... + ......+..+|.+|.-+.. ..+.+||..+++ |+. .+|.... ....
T Consensus 466 G~l~A~D~~tG~~~W~~~---~~~-~---~~~g~~~tagglvf~g~~d-g~l~A~D~~tG~~lW~~-~~~~g~~--a~P~ 534 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHK---EHL-P---LWAGVLATAGNLVFTGTGD-GYFKAFDAKSGKELWKF-QTGSGIV--SPPI 534 (582)
T ss_dssp EEEEEECTTTCCEEEEEE---ESS-C---CCSCCEEETTTEEEEECTT-SEEEEEETTTCCEEEEE-ECSSCCC--SCCE
T ss_pred ceEEEEECCCCCEEEEec---CCC-C---CcccceEeCCCEEEEECCC-CcEEEEECCCCCEEEEe-cCCCCcc--cCce
Confidence 45667787776 48876 222 1 1122234457777774444 599999998765 543 5565442 1222
Q ss_pred EEEECCEEEEEEe
Q 018593 248 LLECDGCLSVIEI 260 (353)
Q Consensus 248 l~~~~g~L~~v~~ 260 (353)
.-+.+|++|++..
T Consensus 535 ~y~~~G~qYv~~~ 547 (582)
T 1flg_A 535 TWEQDGEQYLGVT 547 (582)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEECCEEEEEEE
Confidence 2357899999865
No 204
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=41.19 E-value=1.4e+02 Score=24.23 Aligned_cols=194 Identities=10% Similarity=0.041 Sum_probs=90.3
Q ss_pred CeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceE
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKC 174 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 174 (353)
+|-.++.. .....+.|||..+++....-... ..... .+.+.+.. -.++..+ ....+
T Consensus 76 ~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~--------~~~v~---~~~~~~~~--~~l~s~~----------~d~~i 131 (312)
T 4ery_A 76 DSNLLVSA-SDDKTLKIWDVSSGKCLKTLKGH--------SNYVF---CCNFNPQS--NLIVSGS----------FDESV 131 (312)
T ss_dssp TSSEEEEE-ETTSEEEEEETTTCCEEEEEECC--------SSCEE---EEEECSSS--SEEEEEE----------TTSCE
T ss_pred CCCEEEEE-CCCCEEEEEECCCCcEEEEEcCC--------CCCEE---EEEEcCCC--CEEEEEe----------CCCcE
Confidence 44444432 35568899998887644321111 11111 34454432 2233321 13468
Q ss_pred EEEEcCCCcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-
Q 018593 175 LVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC- 251 (353)
Q Consensus 175 ~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~- 251 (353)
.+||.+++.-...-..... +.. .+.+ +|.+...+..+..|..+|+.+.+........... ....+...
T Consensus 132 ~iwd~~~~~~~~~~~~~~~-~v~------~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~ 202 (312)
T 4ery_A 132 RIWDVKTGKCLKTLPAHSD-PVS------AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSP 202 (312)
T ss_dssp EEEETTTCCEEEEECCCSS-CEE------EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCC--CEEEEEECT
T ss_pred EEEECCCCEEEEEecCCCC-cEE------EEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCC--ceEEEEECC
Confidence 8899887643221000000 111 1111 3544444444458999999887643321111110 11222222
Q ss_pred CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc-cccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 252 DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR-CIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 252 ~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
+|+..+++..+..+.+|.+.. . ..+..+... ......... ....++..++.... +.+.+||+++++....
T Consensus 203 ~~~~l~~~~~d~~i~iwd~~~---~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 274 (312)
T 4ery_A 203 NGKYILAATLDNTLKLWDYSK---G--KCLKTYTGHKNEKYCIFAN-FSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 274 (312)
T ss_dssp TSSEEEEEETTTEEEEEETTT---T--EEEEEECSSCCSSSCCCEE-EECSSSCEEEECCTTSCEEEEETTTCCEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCC---C--cEEEEEEecCCceEEEEEE-EEeCCCcEEEEECCCCEEEEEECCCchhhhh
Confidence 466666666778999996533 2 223333221 111111111 22245664444433 4499999999875543
No 205
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=41.15 E-value=1.7e+02 Score=24.95 Aligned_cols=109 Identities=12% Similarity=0.018 Sum_probs=56.9
Q ss_pred cceEEeeecCCCEEEEEECCCc--eEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEee
Q 018593 208 NGALHWLTDSCSFILALDLEGD--VWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~--~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i 284 (353)
++.+...+..+..|..+|+... ....+ ..+.. .-..+... +|+..+.+..+..+.+|.+.. .. .+..+
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~--~~h~~--~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~---~~--~~~~~ 287 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTY--HGHEG--DINSVKFFPDGQRFGTGSDDGTCRLFDMRT---GH--QLQVY 287 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEE--CCCSS--CCCEEEECTTSSEEEEECSSSCEEEEETTT---TE--EEEEE
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEE--CCcCC--CeEEEEEecCCCeEEEEcCCCeEEEEECCC---Cc--EEEEe
Confidence 4445555544458888998632 22222 11110 11233333 466665555788999996633 22 22222
Q ss_pred ccc-----cccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEE
Q 018593 285 SLR-----CIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKE 326 (353)
Q Consensus 285 ~~~-----~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~ 326 (353)
... .....+..+ .+..+|..++.... +.+.+||..+++...
T Consensus 288 ~~~~~~~~~~~~~v~~~-~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSV-AFSISGRLLFAGYSNGDCYVWDTLLAEMVL 334 (380)
T ss_dssp CCCCSSSCCSSCSCSEE-EECSSSSEEEEECTTSCEEEEETTTCCEEE
T ss_pred cccccccccccCceEEE-EECCCCCEEEEEECCCCEEEEECCCCceEE
Confidence 221 111123344 56678886666544 449999998876543
No 206
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=40.96 E-value=1.4e+02 Score=24.02 Aligned_cols=111 Identities=11% Similarity=0.101 Sum_probs=57.3
Q ss_pred EcceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEee
Q 018593 207 VNGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 207 ~~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i 284 (353)
-+|.+. .+.....+..||+.+.+-... ..... .-..+... +|+ .+++..+..+.+|.++. .+ ....+
T Consensus 194 ~~~~~~-~~~~dg~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~---~~--~~~~~ 262 (313)
T 3odt_A 194 DDGHFI-SCSNDGLIKLVDMHTGDVLRTYEGHES----FVYCIKLLPNGD-IVSCGEDRTVRIWSKEN---GS--LKQVI 262 (313)
T ss_dssp ETTEEE-EEETTSEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSC-EEEEETTSEEEEECTTT---CC--EEEEE
T ss_pred CCCeEE-EccCCCeEEEEECCchhhhhhhhcCCc----eEEEEEEecCCC-EEEEecCCEEEEEECCC---Cc--eeEEE
Confidence 356633 333335899999987653322 22111 12333333 354 33334778899995533 32 23333
Q ss_pred ccccccCccceeeeeecCCcEEEEEeCCcEEEEECCCCeEEEeeeec
Q 018593 285 SLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~~~v~~~~ 331 (353)
... ...+..+ .+..++.++....++.+.+||++++++.....++
T Consensus 263 ~~~--~~~i~~~-~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~~~~ 306 (313)
T 3odt_A 263 TLP--AISIWSV-DCMSNGDIIVGSSDNLVRIFSQEKSRWASEDEIK 306 (313)
T ss_dssp ECS--SSCEEEE-EECTTSCEEEEETTSCEEEEESCGGGCCC-----
T ss_pred ecc--CceEEEE-EEccCCCEEEEeCCCcEEEEeCCCCceeehhhhh
Confidence 221 1122334 5566777444444556999999999887665443
No 207
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=40.77 E-value=99 Score=27.47 Aligned_cols=56 Identities=16% Similarity=0.273 Sum_probs=44.6
Q ss_pred eEEEcceEEeeecCC------CEEEEEECCCceEEEeeCCCCCCCCCceeEEEECCEEEEEEe
Q 018593 204 VVFVNGALHWLTDSC------SFILALDLEGDVWRKISLPDKVGSESRSYLLECDGCLSVIEI 260 (353)
Q Consensus 204 ~v~~~g~ly~~~~~~------~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~~g~L~~v~~ 260 (353)
.-+.+|+||.+.... ..+..-+...+.|+.+.+|..... ........++.|+|++.
T Consensus 344 vkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHh-tnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 344 IKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHH-TTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp EEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCS-SCCCEEEETTEEEEEEE
T ss_pred hhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccc-cCCCcceeCCEEEEEec
Confidence 456789999987653 567777788889999999966544 66778888999999986
No 208
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=40.73 E-value=1.6e+02 Score=24.76 Aligned_cols=136 Identities=10% Similarity=0.004 Sum_probs=71.0
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCcee
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSY 247 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~ 247 (353)
...+.+|+..++.....-..... ... -..+.+ ++.....+..+..|..+|+.++....+........ .-..
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h-~~~----v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~ 168 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGP-GDA----ITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDY-WYCC 168 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCST-TCB----EEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSC-CEEE
T ss_pred CCeEEEEeCCCcccceeeecCCc-CCc----eeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCC-CeEE
Confidence 34788999888766544110000 000 002222 33444444444589999999877776644332211 1223
Q ss_pred EEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCc-EEEEEeC-CcEEEEECCC
Q 018593 248 LLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTRE-YVFLATH-KQVLVYHRNG 321 (353)
Q Consensus 248 l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~-~~~~~yd~~~ 321 (353)
+... +|++.+++..+..+.+|.++. . .+..+.. ....+..+ .+..++. +++.... +.+.+||+++
T Consensus 169 ~~~~~~~~~l~~~~~d~~i~i~d~~~---~---~~~~~~~--h~~~v~~~-~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 169 VDVSVSRQMLATGDSTGRLLLLGLDG---H---EIFKEKL--HKAKVTHA-EFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTS---C---EEEEEEC--SSSCEEEE-EECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEECCCCCEEEEECCCCCEEEEECCC---C---EEEEecc--CCCcEEEE-EECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 3333 466666666778999997621 1 2222221 22223334 4455565 5555554 4599999987
No 209
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=40.47 E-value=1.4e+02 Score=25.21 Aligned_cols=66 Identities=15% Similarity=0.068 Sum_probs=38.1
Q ss_pred eEEE--cceEEeeecC-----CCEEEEEECCCce-EEEeeCCCCCCCC--CceeEEEE--CCEEEEEEe---cCCeEEEE
Q 018593 204 VVFV--NGALHWLTDS-----CSFILALDLEGDV-WRKISLPDKVGSE--SRSYLLEC--DGCLSVIEI---SDEWMETW 268 (353)
Q Consensus 204 ~v~~--~g~ly~~~~~-----~~~i~~~D~~~~~-~~~~~~P~~~~~~--~~~~l~~~--~g~L~~v~~---~~~~~~vw 268 (353)
++.+ +|.||++... ...|+.||+.+++ ...+.+|...... ....++.. +|.+++... ....+.+|
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 4555 4789998643 2489999999887 4555776432110 22344444 467777654 33444444
Q ss_pred E
Q 018593 269 V 269 (353)
Q Consensus 269 ~ 269 (353)
.
T Consensus 151 d 151 (343)
T 2qe8_A 151 D 151 (343)
T ss_dssp E
T ss_pred E
Confidence 3
No 210
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=40.39 E-value=2.5e+02 Score=26.70 Aligned_cols=61 Identities=11% Similarity=0.029 Sum_probs=35.3
Q ss_pred eEEEEEcCCC--cEEEeeeccccceee---eeecCceEEEcceEEeeecCCCEEEEEECCCce--EEEe
Q 018593 173 KCLVFDSESN--RWRKFVSVQDYYQFS---IMNRNQVVFVNGALHWLTDSCSFILALDLEGDV--WRKI 234 (353)
Q Consensus 173 ~~~vy~s~~~--~W~~~~~~~~~~~~~---~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~--~~~~ 234 (353)
.+..+|..+| .|+............ .......++.+|.+|.-+... .+.++|..+++ |+.-
T Consensus 81 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg-~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 81 VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDG-RLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTS-EEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCC-EEEEEECCCCCEeeeec
Confidence 4566776665 588652111000000 011223567889999887664 99999998754 7654
No 211
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=40.34 E-value=1.7e+02 Score=24.73 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=56.4
Q ss_pred cceEEeeecCC---CEEEEEECCCceE-EEeeCCCCC---------CCCCceeEEEE-CCEEEEEEecCCeEEEEEEecC
Q 018593 208 NGALHWLTDSC---SFILALDLEGDVW-RKISLPDKV---------GSESRSYLLEC-DGCLSVIEISDEWMETWVLKDY 273 (353)
Q Consensus 208 ~g~ly~~~~~~---~~i~~~D~~~~~~-~~~~~P~~~---------~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~ 273 (353)
+|.+...+... ..|..||+.+.+- ..+..|... ....-..+... +|++.+.+..+..+.+|.+..
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~- 322 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT- 322 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC-
Confidence 34444444443 4889999887653 222332100 00012233333 467666666788999996633
Q ss_pred CCCCeEEEEeeccc----cc---------------cCccceeeeeecCC----------cEEEEEe-CCcEEEEECCCCe
Q 018593 274 YRDEWHSVDKVSLR----CI---------------KGMVPSIFPISQTR----------EYVFLAT-HKQVLVYHRNGRL 323 (353)
Q Consensus 274 ~~~~W~~~~~i~~~----~~---------------~~~~~~~~~~~~~~----------~~v~~~~-~~~~~~yd~~~~~ 323 (353)
...+..+... .. ...+..+ .+..++ .+++... ++.+.+||+++++
T Consensus 323 ----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~-~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 323 ----KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV-KFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp ----TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE-EEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ----CceeEEEecccCcccchhhhhccccccccccCCceeEE-EeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 3444444421 11 2223334 455565 5565555 4459999998764
No 212
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=40.28 E-value=1.9e+02 Score=25.24 Aligned_cols=152 Identities=11% Similarity=0.071 Sum_probs=74.9
Q ss_pred EEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCC-
Q 018593 143 GLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSC- 218 (353)
Q Consensus 143 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~- 218 (353)
|+.+|...+ +++.. +.....+++++.+...-+.... ..+ ....++.+ +|.|||.....
T Consensus 163 glavD~~~~--~lY~~---------d~~~~~I~~~~~~g~~~~~l~~-~~~------~~P~~iavdp~~g~ly~td~~~~ 224 (400)
T 3p5b_L 163 GLAVDWIHS--NIYWT---------DSVLGTVSVADTKGVKRKTLFR-ENG------SKPRAIVVDPVHGFMYWTDWGTP 224 (400)
T ss_dssp EEEEETTTT--EEEEE---------ETTTTEEEEECTTTCSEEEEEE-CSS------CCEEEEEEETTTTEEEEEECSSS
T ss_pred cEEEEecCC--ceEEE---------ECCCCeEEEEeCCCCceEEEEe-CCC------CCcceEEEecccCeEEEEeCCCC
Confidence 677776433 34443 2224577788876654443311 111 01113333 58999987432
Q ss_pred CEEEEEECCCceEEEeeCCCCCCCCCceeEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCcccee
Q 018593 219 SFILALDLEGDVWRKISLPDKVGSESRSYLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSI 296 (353)
Q Consensus 219 ~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~ 296 (353)
..|..+|+....-..+...... ...-|+.. +++||++...... |+.++-.+....+.... + .. ...+.
T Consensus 225 ~~I~~~~~dG~~~~~~~~~~l~---~P~glavd~~~~~lY~aD~~~~~--I~~~d~dG~~~~~~~~~-~-~~---l~~P~ 294 (400)
T 3p5b_L 225 AKIKKGGLNGVDIYSLVTENIQ---WPNGITLDLLSGRLYWVDSKLHS--ISSIDVNGGNRKTILED-E-KR---LAHPF 294 (400)
T ss_dssp CCEEEEETTSCSCEEEECSSCS---CEEEEEEETTTTEEEEEETTTTE--EEEEETTSCCCEEEEEC-S-ST---TSSEE
T ss_pred CEEEEEeCCCCccEEEEECCCC---ceEEEEEEeCCCEEEEEECCCCE--EEEEeCCCCccEEEEeC-C-CC---CCCCE
Confidence 4799999987543333111111 23344544 6899988765444 55554333233333221 1 01 11233
Q ss_pred eeee-cCCcEEEEEeC-CcEEEEECCCCe
Q 018593 297 FPIS-QTREYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 297 ~~~~-~~~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
+++ .++.+++.... +.|..+|..+++
T Consensus 295 -gl~v~~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 295 -SLAVFEDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp -EEEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred -EEEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence 332 24443333333 349999976653
No 213
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=39.43 E-value=1.7e+02 Score=24.61 Aligned_cols=107 Identities=12% Similarity=0.021 Sum_probs=56.9
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR 287 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~ 287 (353)
|.....+..+..+..+|+.+.+.... +..... .-..+... +|.+.+.+..+..+.+|.+.. . ..+..+...
T Consensus 210 g~~l~sgs~Dg~v~~wd~~~~~~~~~-~~~h~~--~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~---~--~~~~~~~~~ 281 (354)
T 2pbi_B 210 GNTFVSGGCDKKAMVWDMRSGQCVQA-FETHES--DVNSVRYYPSGDAFASGSDDATCRLYDLRA---D--REVAIYSKE 281 (354)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEE-ECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTT---T--EEEEEECCT
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEE-ecCCCC--CeEEEEEeCCCCEEEEEeCCCeEEEEECCC---C--cEEEEEcCC
Confidence 34444444445899999988764332 111110 11222322 466666666788999996643 1 122222221
Q ss_pred cccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeE
Q 018593 288 CIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLW 324 (353)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~ 324 (353)
........+ .+..++.+++.... +.+.+||+.+++-
T Consensus 282 ~~~~~~~~~-~~s~~g~~l~~g~~d~~i~vwd~~~~~~ 318 (354)
T 2pbi_B 282 SIIFGASSV-DFSLSGRLLFAGYNDYTINVWDVLKGSR 318 (354)
T ss_dssp TCCSCEEEE-EECTTSSEEEEEETTSCEEEEETTTCSE
T ss_pred CcccceeEE-EEeCCCCEEEEEECCCcEEEEECCCCce
Confidence 111112233 55667886666654 4599999987753
No 214
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=38.22 E-value=2e+02 Score=24.91 Aligned_cols=154 Identities=10% Similarity=0.070 Sum_probs=73.5
Q ss_pred CceEEEE--cccccceeeccCC--C--CCCCccccCCCceeEEEEEe--ecCCCceEEEEEeeecccCCCCCC-cceEEE
Q 018593 106 MGVYYVC--NPMTREWKLLPKS--R--ERPVTRFYPDGEATLVGLAC--DLAKNKYNVVLAGYHRAFGHRPDG-TFKCLV 176 (353)
Q Consensus 106 ~~~~~v~--NP~t~~~~~LP~~--~--~~~~~~~~~~~~~~~~~~g~--d~~~~~ykvv~~~~~~~~~~~~~~-~~~~~v 176 (353)
.+.+.++ ||.+++...+..+ | .. . ...+ |+.. ++..+.+.+++.. .++ ...+++
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~----~--~~py---Glcly~~~~~g~~yafV~~--------k~G~~~q~~l 160 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATA----I--NEVY---GFTLYHSQKTGKYYAMVTG--------KEGEFEQYEL 160 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECC----C--SSCC---CEEEEECTTTCCEEEEEEC--------SSSEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCC----C--CCee---EEEEEecCCCCcEEEEEEC--------CCCeEEEEEE
Confidence 6778778 9999988877442 2 11 0 1112 4444 5655665666652 112 223334
Q ss_pred EEcCCCcEEEeeeccccceeeeeecCceEEEc---ceEEeeecCCCEEEEEECCCc---eEEEe---eCCCCCCCCCcee
Q 018593 177 FDSESNRWRKFVSVQDYYQFSIMNRNQVVFVN---GALHWLTDSCSFILALDLEGD---VWRKI---SLPDKVGSESRSY 247 (353)
Q Consensus 177 y~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~---g~ly~~~~~~~~i~~~D~~~~---~~~~~---~~P~~~~~~~~~~ 247 (353)
.+.+.+..... ..- ....-....+++++ |.||.--.. ..|..||.+-+ +-..+ ..+....+-....
T Consensus 161 ~~~~~g~~~~~---lVR-~f~lgsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLa 235 (355)
T 3amr_A 161 KADKNGYISGK---KVR-AFKMNSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLT 235 (355)
T ss_dssp EECTTSCEEEE---EEE-EEECSSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEE
T ss_pred EeCCCCcccce---EEE-EecCCCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEE
Confidence 44455544322 000 01111112244443 788887766 48999995522 12333 2222111102233
Q ss_pred EEEE-CC--EEEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 248 LLEC-DG--CLSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 248 l~~~-~g--~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
|... +| .|++.+.....+.|+..+. .+..+.++.
T Consensus 236 i~~~~~g~gyLivSsQG~~s~~Vydr~~----~~~~vg~f~ 272 (355)
T 3amr_A 236 IYYAADGKGYLMASSQGNSSYAIYDRQG----KNKYVADFR 272 (355)
T ss_dssp EEECGGGCEEEEEEEGGGTEEEEEESST----TCCEEEEEE
T ss_pred EEecCCCCEEEEEEcCCCCEEEEEECCC----CCcEEEEEE
Confidence 3322 23 3444444677899986632 344554443
No 215
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=38.18 E-value=1.5e+02 Score=23.62 Aligned_cols=111 Identities=6% Similarity=0.059 Sum_probs=57.9
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
+|.+||.......|..+|+....-..+ .+.... ....++.. +|+|++.......-.|+.+.-.+... ..+....
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~g~~~~~~-~~~~~~--~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~~ 165 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMDGTQRRVL-FDTGLV--NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQDN 165 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEE-ECSSCS--SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEECTT
T ss_pred CCeEEEEECCCCEEEEEEcCCCCEEEE-EECCCC--CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEEEECC
Confidence 578999987666899999986543333 111110 22344443 57888876531122344443222111 1111111
Q ss_pred cccccCccceeeeeecCCcEEEEEeC--CcEEEEECCCCeEEEe
Q 018593 286 LRCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~~~~~v 327 (353)
. .....+ ++..++..+++... +.+..+|++++..+.+
T Consensus 166 ---~-~~P~gi-a~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 166 ---L-GLPNGL-TFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp ---C-SCEEEE-EEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred ---C-CCCcEE-EEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 1 112334 55655554666543 3499999987665544
No 216
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=38.15 E-value=2.1e+02 Score=25.27 Aligned_cols=113 Identities=7% Similarity=0.037 Sum_probs=60.6
Q ss_pred ceEEEc-----ceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEec--CCeEEEEEEecCC
Q 018593 203 QVVFVN-----GALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEIS--DEWMETWVLKDYY 274 (353)
Q Consensus 203 ~~v~~~-----g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~--~~~~~vw~l~~~~ 274 (353)
..+.++ |.|||.... ..|..+|+.+++...+..+.. ....++.. +|+|+++... ...-.+..+...+
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~----~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIG----QCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCS----CEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred ceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCC----CccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 366665 899998776 589999999888877632211 12333433 4777777652 1223344443322
Q ss_pred CCCeEEEEeeccccccCccceeeeeec-CCcEEEEEeC--CcEEEEECCCCeE-EEe
Q 018593 275 RDEWHSVDKVSLRCIKGMVPSIFPISQ-TREYVFLATH--KQVLVYHRNGRLW-KEM 327 (353)
Q Consensus 275 ~~~W~~~~~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~~yd~~~~~~-~~v 327 (353)
...+.. .+.. ......+ .+.. +|. +++... +.+..||+++++. +.+
T Consensus 217 ~~~~~~--~~~~---~~~P~gi-avd~~~G~-lyv~d~~~~~V~~~d~~~g~~~~~~ 266 (433)
T 4hw6_A 217 GFTERL--SLCN---ARGAKTC-AVHPQNGK-IYYTRYHHAMISSYDPATGTLTEEE 266 (433)
T ss_dssp TTCCEE--EEEE---CSSBCCC-EECTTTCC-EEECBTTCSEEEEECTTTCCEEEEE
T ss_pred Ceeccc--cccc---cCCCCEE-EEeCCCCe-EEEEECCCCEEEEEECCCCeEEEEE
Confidence 222211 1111 0111233 4555 666 554432 3488899887776 444
No 217
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=38.14 E-value=2e+02 Score=25.02 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=38.5
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEe
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLK 271 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~ 271 (353)
++.|||.......|.++|+....-..+ ..+.... ....+...++.||++...... |+..+
T Consensus 257 ~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~--~P~gl~v~~~~lywtd~~~~~--V~~~~ 317 (400)
T 3p5b_L 257 SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA--HPFSLAVFEDKVFWTDIINEA--IFSAN 317 (400)
T ss_dssp TTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTS--SEEEEEEETTEEEEEESSSCS--EEEEE
T ss_pred CCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCC--CCEEEEEeCCEEEEecCCCCe--EEEEE
Confidence 589999987667999999986544443 3322221 234566778899988764444 44443
No 218
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=36.92 E-value=2.2e+02 Score=25.09 Aligned_cols=110 Identities=6% Similarity=0.033 Sum_probs=59.7
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCE-EEEEEecC---CeEEEEEEecCCCCCeEEEE
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGC-LSVIEISD---EWMETWVLKDYYRDEWHSVD 282 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~-L~~v~~~~---~~~~vw~l~~~~~~~W~~~~ 282 (353)
+|.||+.... ..|..||+.++....+..+.. ....+... +|+ |++..... ....+|.. ..+ .|....
T Consensus 149 ~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~----~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g--~~~~~~ 220 (430)
T 3tc9_A 149 HNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLS----KVRTICWTHEADSMIITNDQNNNDRPNNYILT-RES--GFKVIT 220 (430)
T ss_dssp EEEEEEEEBT-EEEEEEETTTTEEEEEECCCS----CEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGG--TSCSEE
T ss_pred CCeEEEEeCC-CcEEEEECCCCEEEEEecCCC----CcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCC--ceeeee
Confidence 4889999876 489999999988776632111 22334443 465 77766521 22334433 322 232111
Q ss_pred eeccccccCccceeeeeec-CCcEEEEEe--CCcEEEEECCCCeEEEeeee
Q 018593 283 KVSLRCIKGMVPSIFPISQ-TREYVFLAT--HKQVLVYHRNGRLWKEMYSV 330 (353)
Q Consensus 283 ~i~~~~~~~~~~~~~~~~~-~~~~v~~~~--~~~~~~yd~~~~~~~~v~~~ 330 (353)
.+.. . .....+ .+.. +|. +++.. .+++..||+++++...+..+
T Consensus 221 ~l~~--~-~~p~gi-avdp~~g~-lyv~d~~~~~V~~~~~~~~~~~~~~~~ 266 (430)
T 3tc9_A 221 ELTK--G-QNCNGA-ETHPINGE-LYFNSWNAGQVFRYDFTTQETTPLFTI 266 (430)
T ss_dssp EEEE--C-SSCCCE-EECTTTCC-EEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred eecc--C-CCceEE-EEeCCCCE-EEEEECCCCEEEEEECCCCcEEEEEEc
Confidence 2221 0 111233 4555 666 45443 34599999998877555444
No 219
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=36.42 E-value=1.8e+02 Score=23.96 Aligned_cols=195 Identities=12% Similarity=0.055 Sum_probs=95.8
Q ss_pred ecCeeEEeeecCCCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 93 SCNGLLCCSSIPEMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 93 s~~Gll~~~~~~~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
+.+|-.++.. .....+.|||..+++... +..-. .... .+.+++. .-.++.-+ ..
T Consensus 74 s~dg~~l~s~-s~D~~v~~wd~~~~~~~~~~~~h~---------~~v~---~~~~~~~--~~~l~s~s----------~D 128 (319)
T 3frx_A 74 TADGAYALSA-SWDKTLRLWDVATGETYQRFVGHK---------SDVM---SVDIDKK--ASMIISGS----------RD 128 (319)
T ss_dssp CTTSSEEEEE-ETTSEEEEEETTTTEEEEEEECCS---------SCEE---EEEECTT--SCEEEEEE----------TT
T ss_pred CCCCCEEEEE-eCCCEEEEEECCCCCeeEEEccCC---------CcEE---EEEEcCC--CCEEEEEe----------CC
Confidence 3456555554 456789999999887543 22111 1122 3445442 22233321 13
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCc-eEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEE
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQ-VVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLE 250 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~-~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~ 250 (353)
..+.+|+.+...-......... -........ ....++.....+..+..|..+|+.+.+....-..... .-..+..
T Consensus 129 ~~i~vwd~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~---~v~~~~~ 204 (319)
T 3frx_A 129 KTIKVWTIKGQCLATLLGHNDW-VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNS---NINTLTA 204 (319)
T ss_dssp SCEEEEETTSCEEEEECCCSSC-EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCS---CEEEEEE
T ss_pred CeEEEEECCCCeEEEEeccCCc-EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCC---cEEEEEE
Confidence 4677788764432222110110 011111111 1112333333344445889999988764432211111 1223333
Q ss_pred E-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCcEEEEECCCCeEE
Q 018593 251 C-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGRLWK 325 (353)
Q Consensus 251 ~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~~ 325 (353)
. +|++.+.+..+..+.+|.+.. -..+..+... ..+..+ .+..++..+.....+.+.+|+++++...
T Consensus 205 sp~g~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~---~~v~~~-~~sp~~~~la~~~~~~i~v~~~~~~~~~ 271 (319)
T 3frx_A 205 SPDGTLIASAGKDGEIMLWNLAA-----KKAMYTLSAQ---DEVFSL-AFSPNRYWLAAATATGIKVFSLDPQYLV 271 (319)
T ss_dssp CTTSSEEEEEETTCEEEEEETTT-----TEEEEEEECC---SCEEEE-EECSSSSEEEEEETTEEEEEEETTEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCC-----CcEEEEecCC---CcEEEE-EEcCCCCEEEEEcCCCcEEEEeCcCeee
Confidence 3 467666666788999996633 1234444321 112334 5667888666677777889998876543
No 220
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=36.23 E-value=2e+02 Score=24.53 Aligned_cols=104 Identities=14% Similarity=0.100 Sum_probs=55.0
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS 285 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~ 285 (353)
|.....+..+..+..+|+.+.+.... .... ....+... +|++.+.+..+..+.+|.++. .. .+..+.
T Consensus 177 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~---~~--~~~~~~ 246 (393)
T 1erj_A 177 GDKLVSGSGDRTVRIWDLRTGQCSLTLSIED-----GVTTVAVSPGDGKYIAAGSLDRAVRVWDSET---GF--LVERLD 246 (393)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECSS-----CEEEEEECSTTCCEEEEEETTSCEEEEETTT---CC--EEEEEC
T ss_pred CCEEEEecCCCcEEEEECCCCeeEEEEEcCC-----CcEEEEEECCCCCEEEEEcCCCcEEEEECCC---Cc--EEEeec
Confidence 43333333335899999988765433 2221 12233333 577777666778899996532 22 222232
Q ss_pred c-----ccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCe
Q 018593 286 L-----RCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRL 323 (353)
Q Consensus 286 ~-----~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~ 323 (353)
. .+....+..+ .+..++..++.... +.+.+||+++..
T Consensus 247 ~~~~~~~~h~~~v~~v-~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 247 SENESGTGHKDSVYSV-VFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp ------CCCSSCEEEE-EECTTSSEEEEEETTSEEEEEEC----
T ss_pred ccccCCCCCCCCEEEE-EECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 1 1222333344 56677886666654 449999998643
No 221
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=36.03 E-value=2e+02 Score=24.26 Aligned_cols=67 Identities=9% Similarity=-0.047 Sum_probs=39.0
Q ss_pred CCEEEEEEecCCe-EEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeE
Q 018593 252 DGCLSVIEISDEW-METWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLW 324 (353)
Q Consensus 252 ~g~L~~v~~~~~~-~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~ 324 (353)
+|++.+.+..+.. +.+|.++. ...+..+........+..+ .+..++..++.... +.+.+||++++..
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~-----~~~~~~~~~g~h~~~v~~~-~~s~~~~~l~s~s~d~~v~iw~~~~~~~ 274 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTED-----GVLVREFRRGLDRADVVDM-KWSTDGSKLAVVSDKWTLHVFEIFNDQD 274 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTT-----CCEEEEEECTTCCSCEEEE-EECTTSCEEEEEETTCEEEEEESSCCSC
T ss_pred CCCEEEEEeCCCCEEEEEECCC-----CcEEEEEEcCCCCCcEEEE-EECCCCCEEEEEECCCEEEEEEccCCCC
Confidence 4666666556676 99996533 2344444311022223344 56678886666554 4499999987643
No 222
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=35.80 E-value=2e+02 Score=24.35 Aligned_cols=202 Identities=11% Similarity=0.071 Sum_probs=92.9
Q ss_pred ecCeeEE-eeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 93 SCNGLLC-CSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 93 s~~Gll~-~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
|-+|-++ +........+.|||+.+++.......... .. .+.+.+.+ +.++.+ . .
T Consensus 142 SpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~---------V~---~v~fspdg---~~l~s~--------s--~ 196 (365)
T 4h5i_A 142 SREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGE---------VK---DLHFSTDG---KVVAYI--------T--G 196 (365)
T ss_dssp CTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSC---------CC---EEEECTTS---SEEEEE--------C--S
T ss_pred cCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCc---------eE---EEEEccCC---ceEEec--------c--c
Confidence 4456443 33223456899999999887664432211 22 34454432 222221 1 2
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCC----CEEEEEECCCceEEEe---eCCCCCCCCC
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC----SFILALDLEGDVWRKI---SLPDKVGSES 244 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~----~~i~~~D~~~~~~~~~---~~P~~~~~~~ 244 (353)
..+.+++..++.-......... .... ..-...-+|.....+... ..+..+|......... .+..... .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~-~~~v--~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~ 271 (365)
T 4h5i_A 197 SSLEVISTVTGSCIARKTDFDK-NWSL--SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK--G 271 (365)
T ss_dssp SCEEEEETTTCCEEEEECCCCT-TEEE--EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS--C
T ss_pred eeEEEEEeccCcceeeeecCCC-CCCE--EEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC--C
Confidence 2456666666644322110000 0000 000122244444433222 2455666666554433 2222221 1
Q ss_pred ceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCC-cEEEEECCCC
Q 018593 245 RSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHK-QVLVYHRNGR 322 (353)
Q Consensus 245 ~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~yd~~~~ 322 (353)
-..+..+ +|++.+.+..+..+.||.++. ...+..+. .++...+..+ .+..+|..|...... .+.++|+.++
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~-----~~~~~~~~-~gH~~~V~~v-~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKD-----LSMSKIFK-QAHSFAITEV-TISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTT-----TEEEEEET-TSSSSCEEEE-EECTTSCEEEEEETTSEEEEEECCTT
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCC-----CcEEEEec-CcccCCEEEE-EECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 1223333 477766666778899996533 23343332 2333334556 777889866655544 4999998543
Q ss_pred ------eEEEeeeec
Q 018593 323 ------LWKEMYSVK 331 (353)
Q Consensus 323 ------~~~~v~~~~ 331 (353)
.++++..++
T Consensus 345 ~~~~~s~~~~l~kl~ 359 (365)
T 4h5i_A 345 YANYTSMKQKISKLE 359 (365)
T ss_dssp TTC------------
T ss_pred CcCccCccccceeee
Confidence 455554444
No 223
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=35.54 E-value=2.3e+02 Score=24.95 Aligned_cols=147 Identities=5% Similarity=-0.005 Sum_probs=77.8
Q ss_pred cCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcce
Q 018593 94 CNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFK 173 (353)
Q Consensus 94 ~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (353)
.+|.|++.... ..+.++++.+++...+.+... ... ++.+|+..+ .+++.. ... ......
T Consensus 148 ~~g~Lyv~d~~--~~I~~id~~~~~v~~~~~~~~---------~P~---~ia~d~~G~--~lyvad----~~~-~~~~~~ 206 (430)
T 3tc9_A 148 NHNHLYLVGEQ--HPTRLIDFEKEYVSTVYSGLS---------KVR---TICWTHEAD--SMIITN----DQN-NNDRPN 206 (430)
T ss_dssp EEEEEEEEEBT--EEEEEEETTTTEEEEEECCCS---------CEE---EEEECTTSS--EEEEEE----CCS-CTTSEE
T ss_pred CCCeEEEEeCC--CcEEEEECCCCEEEEEecCCC---------Ccc---eEEEeCCCC--EEEEEe----CCC-Ccccce
Confidence 46777777522 788899998887666543211 111 566665432 344432 110 011223
Q ss_pred EEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCCCceeEE
Q 018593 174 CLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSESRSYLL 249 (353)
Q Consensus 174 ~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~~~~~l~ 249 (353)
+.+++. .+.|... ... + ......++.+ +|.||+.......|..||+.+.....+ ..+... ....++
T Consensus 207 v~~~~~-~g~~~~~---~~l-~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~---~P~gia 276 (430)
T 3tc9_A 207 NYILTR-ESGFKVI---TEL-T--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSG---WEFHIQ 276 (430)
T ss_dssp EEEEEG-GGTSCSE---EEE-E--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSS---CCEEEE
T ss_pred EEEEeC-CCceeee---eee-c--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCC---cceeEE
Confidence 444553 3444322 111 1 1112224444 688999876656899999998776333 444322 233455
Q ss_pred EE-CCE-EEEEEecCCeEEEEEEe
Q 018593 250 EC-DGC-LSVIEISDEWMETWVLK 271 (353)
Q Consensus 250 ~~-~g~-L~~v~~~~~~~~vw~l~ 271 (353)
.. +|+ |+++......+.++..+
T Consensus 277 ~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 277 FHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EcCCCCEEEEEECCCCEEEEEeCC
Confidence 44 466 77776656665555443
No 224
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=33.82 E-value=2.2e+02 Score=24.17 Aligned_cols=109 Identities=11% Similarity=0.069 Sum_probs=60.6
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEe-eCCCCCCCC---CceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEE
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKVGSE---SRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVD 282 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~~~---~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~ 282 (353)
+|.....+..+..|..+|+.+..-... ......... .-..+... +|++.+++..+..+.+|.+.. .+ .+.
T Consensus 260 ~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~---~~--~~~ 334 (380)
T 3iz6_a 260 DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL---AE--MVL 334 (380)
T ss_dssp TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT---CC--EEE
T ss_pred CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCC---Cc--eEE
Confidence 455555555446899999998764333 222211110 11233333 577777766788999995432 22 333
Q ss_pred eecc--ccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCC
Q 018593 283 KVSL--RCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGR 322 (353)
Q Consensus 283 ~i~~--~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~ 322 (353)
.+.. .+....+.-+ .+..+|..++.+.. +.+.+||+.++
T Consensus 335 ~~~~~~~~h~~~v~~l-~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 335 NLGTLQNSHEGRISCL-GLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EECCSCSSCCCCCCEE-EECSSSSEEEEECTTSCEEEEECCSS
T ss_pred EEecccCCCCCceEEE-EECCCCCEEEEeeCCCCEEEEecCCC
Confidence 3322 2333334445 66778886655554 44999998775
No 225
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=33.46 E-value=3.2e+02 Score=25.95 Aligned_cols=183 Identities=10% Similarity=0.009 Sum_probs=87.8
Q ss_pred CCceEEEEcccccceee-ccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCc
Q 018593 105 EMGVYYVCNPMTREWKL-LPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNR 183 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~-LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~ 183 (353)
..+.+.|||..+++... +..... ... .+.+.+.. . .++..+ ....+.+|+..++.
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~~---------~v~---~~~~s~~~-~-~l~~~~----------~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTET---------PVR---AGKFIARK-N-WIIVGS----------DDFRIRVFNYNTGE 88 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSS---------CEE---EEEEEGGG-T-EEEEEE----------TTSEEEEEETTTCC
T ss_pred CCCEEEEEECCCCceEEEEecCCC---------cEE---EEEEeCCC-C-EEEEEe----------CCCeEEEEECCCCc
Confidence 45678888988876544 221111 122 45555532 2 233321 14578899988876
Q ss_pred EEEeee-ccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCc-eEEEeeCCCCCCCCCceeEEEE--CCEEEEEE
Q 018593 184 WRKFVS-VQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGD-VWRKISLPDKVGSESRSYLLEC--DGCLSVIE 259 (353)
Q Consensus 184 W~~~~~-~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~-~~~~~~~P~~~~~~~~~~l~~~--~g~L~~v~ 259 (353)
....-. .... ........ +|.....+..+..+..+|..++ ........... .-..+.-. +|.+.+++
T Consensus 89 ~~~~~~~~~~~-v~~~~~s~-----~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 89 KVVDFEAHPDY-IRSIAVHP-----TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH---FVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp EEEEEECCSSC-EEEEEECS-----SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS---CEEEEEEETTEEEEEEEE
T ss_pred EEEEEecCCCC-EEEEEEeC-----CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC---cEEEEEEEcCCCCEEEEE
Confidence 543311 0111 11111111 3433333333358999998876 33222111111 12333334 35666666
Q ss_pred ecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeec--CCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 260 ISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQ--TREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 260 ~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
..+..+.+|.+.... ...... .. .......+ .... ++..++.... +.+.+||+++++....
T Consensus 160 ~~dg~v~vwd~~~~~-~~~~~~----~~-~~~~v~~~-~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 223 (814)
T 3mkq_A 160 CLDRTVKVWSLGQST-PNFTLT----TG-QERGVNYV-DYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT 223 (814)
T ss_dssp ETTSEEEEEETTCSS-CSEEEE----CC-CTTCCCEE-EECCSTTCCEEEEECTTSEEEEEETTTTEEEEE
T ss_pred eCCCeEEEEECCCCc-ceeEEe----cC-CCCCEEEE-EEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE
Confidence 677889999663321 222221 11 11112222 3333 6665555554 4499999988775443
No 226
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=33.12 E-value=2.9e+02 Score=25.43 Aligned_cols=78 Identities=15% Similarity=0.267 Sum_probs=45.5
Q ss_pred ceEEEEEcCCC--cEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCce--EEEeeCCCCCCCCCcee
Q 018593 172 FKCLVFDSESN--RWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDV--WRKISLPDKVGSESRSY 247 (353)
Q Consensus 172 ~~~~vy~s~~~--~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~--~~~~~~P~~~~~~~~~~ 247 (353)
-.+..+|..++ .|+.. ... +. .....+..+|.+|.-... ..+.++|..+.+ |+. .++.... ....
T Consensus 444 g~l~a~D~~tG~~~W~~~---~~~-~~---~~~~~~t~gg~v~~g~~d-g~l~a~D~~tG~~lw~~-~~~~~~~--~~p~ 512 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKW---EKF-AA---WGGTLYTKGGLVWYATLD-GYLKALDNKDGKELWNF-KMPSGGI--GSPM 512 (571)
T ss_dssp EEEEEECTTTCCEEEEEE---ESS-CC---CSBCEEETTTEEEEECTT-SEEEEEETTTCCEEEEE-ECSSCCC--SCCE
T ss_pred CeEEEEECCCCCEEEEec---CCC-Cc---cceeEEECCCEEEEEcCC-CeEEEEECCCCCEEEEE-eCCCCcE--eeeE
Confidence 46777887776 48766 221 11 111223447788875444 499999998765 443 4554331 1222
Q ss_pred EEEECCEEEEEEe
Q 018593 248 LLECDGCLSVIEI 260 (353)
Q Consensus 248 l~~~~g~L~~v~~ 260 (353)
..+.+|+++++..
T Consensus 513 ~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 513 TYSFKGKQYIGSM 525 (571)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEECCEEEEEEE
Confidence 2347899998765
No 227
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=31.94 E-value=2.3e+02 Score=23.89 Aligned_cols=109 Identities=9% Similarity=-0.040 Sum_probs=56.1
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
++.+...+.. ..|..||+.+.+....-..... .-..+... +|++.+++..+..+.+|.+... + .+..+.
T Consensus 217 ~~~~~~~~~~-g~i~~~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~--~~~~~~- 286 (425)
T 1r5m_A 217 DDKFVIPGPK-GAIFVYQITEKTPTGKLIGHHG---PISVLEFNDTNKLLLSASDDGTLRIWHGGNG---N--SQNCFY- 286 (425)
T ss_dssp TTEEEEECGG-GCEEEEETTCSSCSEEECCCSS---CEEEEEEETTTTEEEEEETTSCEEEECSSSB---S--CSEEEC-
T ss_pred CCEEEEEcCC-CeEEEEEcCCCceeeeeccCCC---ceEEEEECCCCCEEEEEcCCCEEEEEECCCC---c--cceEec-
Confidence 4554444444 4899999988643221111111 12233333 4666655557788999965331 1 111121
Q ss_pred ccccCccceeeeeecCCcEEEEEe-CCcEEEEECCCCeEEEeee
Q 018593 287 RCIKGMVPSIFPISQTREYVFLAT-HKQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~yd~~~~~~~~v~~ 329 (353)
.....+..+ .+..++ .++... ++.+.+||+++++......
T Consensus 287 -~~~~~i~~~-~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~ 327 (425)
T 1r5m_A 287 -GHSQSIVSA-SWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI 327 (425)
T ss_dssp -CCSSCEEEE-EEETTT-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred -CCCccEEEE-EECCCC-EEEEEeCCCcEEEEECCCCcEeEecc
Confidence 112222333 445566 455444 4459999999887665543
No 228
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=31.27 E-value=48 Score=24.18 Aligned_cols=29 Identities=17% Similarity=0.344 Sum_probs=21.9
Q ss_pred CcEEEEEeCCcEEEEECCCCeEEEeeeecc
Q 018593 303 REYVFLATHKQVLVYHRNGRLWKEMYSVKY 332 (353)
Q Consensus 303 ~~~v~~~~~~~~~~yd~~~~~~~~v~~~~~ 332 (353)
..++....+-.++.||.++++|++. +++|
T Consensus 29 ~~Il~~a~~v~vY~f~~~~~~W~K~-~iEG 57 (134)
T 2lyd_A 29 KEIVDSSSHVAFYTFNSSQNEWEKT-DVEG 57 (134)
T ss_dssp CEEEEEEEEEEEEEEETTTTEEEEE-EEEE
T ss_pred HHHHhhCCeEEEEEecCCcCceeEc-CCcc
Confidence 3545666666799999999999998 4554
No 229
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=31.01 E-value=2.2e+02 Score=23.38 Aligned_cols=71 Identities=11% Similarity=0.198 Sum_probs=41.4
Q ss_pred CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEeee
Q 018593 252 DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 252 ~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v~~ 329 (353)
+|++.+++..+..+.+|.+... ...+..+.. ....+..+ .+..++..++.... +.+.+||+++++......
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~--~~~~v~~~-~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNN----YEYVDSIDL--HEKSISDM-QFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTT----TEEEEEEEC--CSSCEEEE-EECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCC----cEeEEEEec--CCCceeEE-EECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 3666666567788999965331 233333332 11122334 55567776666554 459999999987665543
No 230
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=30.54 E-value=2.4e+02 Score=23.57 Aligned_cols=140 Identities=8% Similarity=-0.015 Sum_probs=67.4
Q ss_pred eEEEEEcCC--CcEEEeeeccccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeE
Q 018593 173 KCLVFDSES--NRWRKFVSVQDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYL 248 (353)
Q Consensus 173 ~~~vy~s~~--~~W~~~~~~~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l 248 (353)
...+|-+.+ .+|+........ . -..|.. ++.+|..+..+ .|+.-+-..++|+.+..+..........+
T Consensus 14 ~~~~~~s~d~g~~W~~~~~~~~~-~------~~~v~~~~~~~~~~~G~~g-~i~~s~DgG~tW~~~~~~~~~~~~~~~~i 85 (327)
T 2xbg_A 14 PRGSAIPALDYNPWEAIQLPTTA-T------ILDMSFIDRHHGWLVGVNA-TLMETRDGGQTWEPRTLVLDHSDYRFNSV 85 (327)
T ss_dssp ----CCCBCSSCCEEEEECSCSS-C------EEEEEESSSSCEEEEETTT-EEEEESSTTSSCEECCCCCSCCCCEEEEE
T ss_pred ccceeecCCCCCCceEeecCCCC-c------EEEEEECCCCcEEEEcCCC-eEEEeCCCCCCCeECCCCCCCCCccEEEE
Confidence 334666544 589888422111 1 113333 34455544433 55544444578998855431111022334
Q ss_pred EEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeec-cccccCccceeeeeecCCcEEEEEeCCcEEEEECCCCeEEEe
Q 018593 249 LECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVS-LRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGRLWKEM 327 (353)
Q Consensus 249 ~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~~~~~v 327 (353)
...++.++++.... .|+.-.| +...|.++.... +++. ...+ .+..++.+++....+.++.-+-..++|+.+
T Consensus 86 ~~~~~~~~~~g~~g---~i~~S~D-gG~tW~~~~~~~~~~~~---~~~i-~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~ 157 (327)
T 2xbg_A 86 SFQGNEGWIVGEPP---IMLHTTD-GGQSWSQIPLDPKLPGS---PRLI-KALGNGSAEMITNVGAIYRTKDSGKNWQAL 157 (327)
T ss_dssp EEETTEEEEEEETT---EEEEESS-TTSSCEECCCCTTCSSC---EEEE-EEEETTEEEEEETTCCEEEESSTTSSEEEE
T ss_pred EecCCeEEEEECCC---eEEEECC-CCCCceECccccCCCCC---eEEE-EEECCCCEEEEeCCccEEEEcCCCCCCEEe
Confidence 44567877764332 4555433 348999875432 1211 1122 233455533333344466666667789887
Q ss_pred e
Q 018593 328 Y 328 (353)
Q Consensus 328 ~ 328 (353)
.
T Consensus 158 ~ 158 (327)
T 2xbg_A 158 V 158 (327)
T ss_dssp E
T ss_pred e
Confidence 4
No 231
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=30.40 E-value=3.4e+02 Score=25.36 Aligned_cols=189 Identities=12% Similarity=0.047 Sum_probs=91.9
Q ss_pred eecCeeEEeeecCCCceEEEEcccccce-eeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCC
Q 018593 92 ASCNGLLCCSSIPEMGVYYVCNPMTREW-KLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDG 170 (353)
Q Consensus 92 ~s~~Gll~~~~~~~~~~~~v~NP~t~~~-~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 170 (353)
+..+|.|++.. ....++..+++..... ..+-..... ...|+.+|...+ +++.. +..
T Consensus 48 ~~~~~~ly~sD-~~~~~I~r~~~~g~~~~~~v~~~~~~-----------~P~GlAvD~~~~--~ly~~---------d~~ 104 (619)
T 3s94_A 48 VFSHGLIYWSD-VSEEAIKRTEFNKTESVQNVVVSGLL-----------SPDGLACDWLGE--KLYWT---------DSE 104 (619)
T ss_dssp ETTTTEEEEEE-TTTTEEEEEEC-----CEEEECSSCS-----------CEEEEEEETTTT--EEEEE---------ETT
T ss_pred EeCCCEEEEEE-CCCCeEEEEEccCCCceEEEEeCCCC-----------CcCeEEEEecCC--EEEEE---------eCC
Confidence 45578888875 3456777777765421 221111100 111777877543 34444 223
Q ss_pred cceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecC-CCEEEEEECCCceEEEeeCCCCCCCCCce
Q 018593 171 TFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDS-CSFILALDLEGDVWRKISLPDKVGSESRS 246 (353)
Q Consensus 171 ~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~-~~~i~~~D~~~~~~~~~~~P~~~~~~~~~ 246 (353)
...+++++.....=+.... .. ......+.+ +|.|||.... ...|...+++...-..+--.... ...
T Consensus 105 ~~~I~v~~~dG~~~~~l~~-~~------l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~---~P~ 174 (619)
T 3s94_A 105 TNRIEVSNLDGSLRKVLFW-QE------LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY---WPN 174 (619)
T ss_dssp TTEEEEEETTSCSCEEEEC-SS------CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS---SEE
T ss_pred CCEEEEEECCCCCEEEEEe-CC------CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCC---CCc
Confidence 5678888876432222210 11 111224554 5899999743 24899999886544443111111 223
Q ss_pred eEEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEE-eeccccccCccceeeeeecCCcEEEEEeC--CcEEEEECCC
Q 018593 247 YLLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVD-KVSLRCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRNG 321 (353)
Q Consensus 247 ~l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~-~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~ 321 (353)
.|+.. +++||++..... .||..+-.+........ .++ .|. +++-.++.+|.... +.+...|..+
T Consensus 175 Glald~~~~~LY~aD~~~~--~I~~~~~dG~~~~~~~~~~~~--------~P~-gi~~~~~~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 175 GLTLDYEEQKLYWADAKLN--FIHKSNLDGTNRQAVVKGSLP--------HPF-ALTLFEDILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp EEEEETTTTEEEEEETTTC--CEEEESSSCCEEC-----------------CC-CEEESSSEEEEECTTTCSEEEEESSS
T ss_pred EEEEEccCCEEEEEeCCCC--eEEEecCCCCccEEEEeCCCC--------Cce-EEEEeCCEEEEecCCCCEEEEEECCC
Confidence 44444 589999876444 35666443322222221 111 122 22222333555543 3499999987
Q ss_pred CeE
Q 018593 322 RLW 324 (353)
Q Consensus 322 ~~~ 324 (353)
++-
T Consensus 244 g~~ 246 (619)
T 3s94_A 244 GEG 246 (619)
T ss_dssp CCC
T ss_pred Ccc
Confidence 753
No 232
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=29.94 E-value=3.5e+02 Score=25.34 Aligned_cols=107 Identities=14% Similarity=0.076 Sum_probs=58.1
Q ss_pred EEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCCC
Q 018593 143 GLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSCS 219 (353)
Q Consensus 143 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~~ 219 (353)
++.+|+..+ +|+... .....+..++......+.+. .. . .....++.+ +|.|||......
T Consensus 41 ~l~~d~~~~--~lywtD---------~~~~~I~r~~~~g~~~~~v~---~~---g-~~~P~GlAvD~~~~~LY~tD~~~~ 102 (628)
T 4a0p_A 41 ALDFDVTDN--RIYWTD---------ISLKTISRAFMNGSALEHVV---EF---G-LDYPEGMAVDWLGKNLYWADTGTN 102 (628)
T ss_dssp EEEEETTTT--EEEEEE---------TTTTEEEEEETTSCSCEEEE---CS---S-CSCCCEEEEETTTTEEEEEETTTT
T ss_pred EEEEECCCC--EEEEEE---------CCCCeEEEEECCCCCcEEEE---eC---C-CCCcceEEEEeCCCEEEEEECCCC
Confidence 777776543 455542 22446666776655454441 11 0 112234555 589999987667
Q ss_pred EEEEEECCCceEEEeeCCCCCCCCCceeEEEE--CCEEEEEEecCCeEEEEEEe
Q 018593 220 FILALDLEGDVWRKISLPDKVGSESRSYLLEC--DGCLSVIEISDEWMETWVLK 271 (353)
Q Consensus 220 ~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw~l~ 271 (353)
.|.++|+....-..+...... ....|+.- +|.||..... ..-.|++..
T Consensus 103 ~I~v~~~dG~~~~~l~~~~l~---~P~~iavdp~~G~lY~tD~g-~~~~I~r~~ 152 (628)
T 4a0p_A 103 RIEVSKLDGQHRQVLVWKDLD---SPRALALDPAEGFMYWTEWG-GKPKIDRAA 152 (628)
T ss_dssp EEEEEETTSTTCEEEECSSCC---CEEEEEEETTTTEEEEEECS-SSCEEEEEE
T ss_pred EEEEEecCCCcEEEEEeCCCC---CcccEEEccCCCeEEEeCCC-CCCEEEEEe
Confidence 899999987543333211111 23445554 6888887642 123455553
No 233
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=29.44 E-value=2.3e+02 Score=22.98 Aligned_cols=184 Identities=14% Similarity=0.091 Sum_probs=89.7
Q ss_pred CCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcE
Q 018593 105 EMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRW 184 (353)
Q Consensus 105 ~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W 184 (353)
..+.+.||+..+++....-... ..... .+.+.+.. . .++..+ ....+.+|+..++.-
T Consensus 43 ~dg~i~iw~~~~~~~~~~~~~h--------~~~v~---~~~~~~~~-~-~l~s~~----------~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 43 ADKLIKIWGAYDGKFEKTISGH--------KLGIS---DVAWSSDS-N-LLVSAS----------DDKTLKIWDVSSGKC 99 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCC--------SSCEE---EEEECTTS-S-EEEEEE----------TTSEEEEEETTTCCE
T ss_pred CCCeEEEEeCCCcccchhhccC--------CCceE---EEEEcCCC-C-EEEEEC----------CCCEEEEEECCCCcE
Confidence 4556788888777655432111 11122 45555432 2 233321 145788899887643
Q ss_pred EEe-eeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-CCEEEEEEecC
Q 018593 185 RKF-VSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-DGCLSVIEISD 262 (353)
Q Consensus 185 ~~~-~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~ 262 (353)
... ...... -...... -+|.+...+..+..|..+|+.+.+.... ++.... .-..+... +|++.+.+..+
T Consensus 100 ~~~~~~~~~~-v~~~~~~-----~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 100 LKTLKGHSNY-VFCCNFN-----PQSNLIVSGSFDESVRIWDVKTGKCLKT-LPAHSD--PVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EEEEECCSSC-EEEEEEC-----SSSSEEEEEETTSCEEEEETTTCCEEEE-ECCCSS--CEEEEEECTTSSEEEEEETT
T ss_pred EEEEcCCCCC-EEEEEEc-----CCCCEEEEEeCCCcEEEEECCCCEEEEE-ecCCCC--cEEEEEEcCCCCEEEEEeCC
Confidence 221 000000 0111111 1333333343335899999987654322 222211 11222222 46766666677
Q ss_pred CeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 263 EWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 263 ~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
..+.+|.+.. .+ .+..+... .......+ .+..++..++.... +.+.+||+++++....
T Consensus 171 ~~i~~wd~~~---~~--~~~~~~~~-~~~~~~~~-~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 171 GLCRIWDTAS---GQ--CLKTLIDD-DNPPVSFV-KFSPNGKYILAATLDNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp SCEEEEETTT---CC--EEEEECCS-SCCCEEEE-EECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred CcEEEEECCC---Cc--eeeEEecc-CCCceEEE-EECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 8899996533 22 22222211 11112234 55667776666554 4599999999876544
No 234
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=28.98 E-value=2.6e+02 Score=23.59 Aligned_cols=113 Identities=10% Similarity=0.047 Sum_probs=56.5
Q ss_pred ceEEeeecCCCEEEEEECCCceEEEe-eCCCCCC--CCCceeEEEEC-C-EEEEEEecCC---eEEEEEEecCCCCCeEE
Q 018593 209 GALHWLTDSCSFILALDLEGDVWRKI-SLPDKVG--SESRSYLLECD-G-CLSVIEISDE---WMETWVLKDYYRDEWHS 280 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~~--~~~~~~l~~~~-g-~L~~v~~~~~---~~~vw~l~~~~~~~W~~ 280 (353)
+.+...+.....|..+|+.+.+.... ..+.... ...-..+.... | .+.+++..+. .+.+|.+.......
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~--- 254 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPL--- 254 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCS---
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCc---
Confidence 34555544445899999998765333 3332110 00122333332 3 4555555444 88999764421110
Q ss_pred EEeeccccccCccceeeeeec-CCcEEEEEeC-CcEEEEECCCCeEEEe
Q 018593 281 VDKVSLRCIKGMVPSIFPISQ-TREYVFLATH-KQVLVYHRNGRLWKEM 327 (353)
Q Consensus 281 ~~~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~~yd~~~~~~~~v 327 (353)
..+. ......+..+ .+.. ++.+++.... +.+.+||+++++....
T Consensus 255 -~~~~-~~~~~~v~~~-~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~ 300 (416)
T 2pm9_A 255 -QTLN-QGHQKGILSL-DWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQ 300 (416)
T ss_dssp -BCCC-SCCSSCEEEE-EECSSCSSCEEEEESSSEEEEECSSSCCEEEE
T ss_pred -EEee-cCccCceeEE-EeCCCCCCeEEEEeCCCCEEEeeCCCCcccee
Confidence 1111 0122222233 4444 6665655554 4599999998765443
No 235
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=28.94 E-value=2.4e+02 Score=23.04 Aligned_cols=72 Identities=8% Similarity=0.047 Sum_probs=42.3
Q ss_pred CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCc-EEEEEeC-CcEEEEEC-CCCeEEEee
Q 018593 252 DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTRE-YVFLATH-KQVLVYHR-NGRLWKEMY 328 (353)
Q Consensus 252 ~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~-~~~~~yd~-~~~~~~~v~ 328 (353)
+|++.+++..+..+.+|.++.... -.....+. .....+..+ .+..++. .++.... +.+.+||+ ++++...+.
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~--~~~~~~~~--~~~~~v~~~-~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 96 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAK--NVDLLQSL--RYKHPLLCC-NFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT 96 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTT--EEEEEEEE--ECSSCEEEE-EEEESSSEEEEEEETTSCEEEECSSSSSSEEECB
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCc--cccceeee--ecCCceEEE-EECCCCCcEEEEEcCCCeEEEEEeccCCceEecc
Confidence 466666666778999998865321 11111111 122223334 4555677 6666654 55999999 998876653
No 236
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=28.88 E-value=1.5e+02 Score=20.68 Aligned_cols=42 Identities=17% Similarity=0.235 Sum_probs=27.7
Q ss_pred ceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEe
Q 018593 107 GVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAG 159 (353)
Q Consensus 107 ~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 159 (353)
-.+++++|.++.|...-... +...+ .+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~~~----------g~s~V-~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGST----------GFSRV-HIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGCC----------SCEEE-EEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCCC----------CceEE-EEEEECCCCEEEEEEEE
Confidence 36788899999886543211 11112 57778888899998863
No 237
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=28.09 E-value=3.9e+02 Score=25.32 Aligned_cols=143 Identities=14% Similarity=0.064 Sum_probs=79.5
Q ss_pred cceEEEEEcCCC--c-EEEeeeccccceeeeeecCceEEEcceEEeeecCC---CEEEEEECCC--ceEEEeeCCCCCCC
Q 018593 171 TFKCLVFDSESN--R-WRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSC---SFILALDLEG--DVWRKISLPDKVGS 242 (353)
Q Consensus 171 ~~~~~vy~s~~~--~-W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~---~~i~~~D~~~--~~~~~~~~P~~~~~ 242 (353)
...+.+++..++ . |+.+...... .... ....++.+|+.+... ..|..+|+.+ +.|..+- |....
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~-----~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~- 364 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKA-QWDF-----VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKD- 364 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSS-CEEE-----EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSS-
T ss_pred cceEEEEECCCCCCcccEEecCCCCc-eEEE-----EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCC-
Confidence 457778888776 6 7777322111 0111 113456788877543 4699999988 5787763 33221
Q ss_pred CCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCc-EEEEEeC----CcEEEE
Q 018593 243 ESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTRE-YVFLATH----KQVLVY 317 (353)
Q Consensus 243 ~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~----~~~~~y 317 (353)
.-..+...++.|++....+....||.++-.+ . ....+..+.. ..+..+ ....++. +++..+. +.++.|
T Consensus 365 -~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g-~---~~~~l~~~~~-~~v~~~-~~s~d~~~l~~~~ss~~~P~~i~~~ 437 (741)
T 1yr2_A 365 -NLESVGIAGNRLFASYIHDAKSQVLAFDLDG-K---PAGAVSLPGI-GSASGL-SGRPGDRHAYLSFSSFTQPATVLAL 437 (741)
T ss_dssp -EEEEEEEEBTEEEEEEEETTEEEEEEEETTS-C---EEEECBCSSS-CEEEEE-ECCBTCSCEEEEEEETTEEEEEEEE
T ss_pred -eEEEEEEECCEEEEEEEECCEEEEEEEeCCC-C---ceeeccCCCC-eEEEEe-ecCCCCCEEEEEEcCCCCCCEEEEE
Confidence 1112344578887777667778899886322 2 3334443211 111222 3333444 3433332 349999
Q ss_pred ECCCCeEEEee
Q 018593 318 HRNGRLWKEMY 328 (353)
Q Consensus 318 d~~~~~~~~v~ 328 (353)
|+++++.+.+.
T Consensus 438 d~~tg~~~~l~ 448 (741)
T 1yr2_A 438 DPATAKTTPWE 448 (741)
T ss_dssp ETTTTEEEECS
T ss_pred ECCCCcEEEEe
Confidence 99999877663
No 238
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=27.81 E-value=3.6e+02 Score=24.78 Aligned_cols=152 Identities=12% Similarity=0.070 Sum_probs=70.6
Q ss_pred CeeEEeeecCCCceEEEEcccccceeecc-CCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCcce
Q 018593 95 NGLLCCSSIPEMGVYYVCNPMTREWKLLP-KSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGTFK 173 (353)
Q Consensus 95 ~Gll~~~~~~~~~~~~v~NP~t~~~~~LP-~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 173 (353)
+|-++... .....+.|||..+++....- ...... ..+..... ++.+.+. +-.++..+ ....
T Consensus 201 dg~~las~-s~D~~i~lwd~~~g~~~~~~~~~~~~~--~~h~~~V~---~v~~spd--g~~l~s~s----------~D~~ 262 (611)
T 1nr0_A 201 DGSLFAST-GGDGTIVLYNGVDGTKTGVFEDDSLKN--VAHSGSVF---GLTWSPD--GTKIASAS----------ADKT 262 (611)
T ss_dssp TSSEEEEE-ETTSCEEEEETTTCCEEEECBCTTSSS--CSSSSCEE---EEEECTT--SSEEEEEE----------TTSE
T ss_pred CCCEEEEE-ECCCcEEEEECCCCcEeeeeccccccc--cccCCCEE---EEEECCC--CCEEEEEe----------CCCe
Confidence 45444443 34567889998888755422 111000 00111122 5666553 22333322 1457
Q ss_pred EEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE-C
Q 018593 174 CLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLEC-D 252 (353)
Q Consensus 174 ~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~-~ 252 (353)
+.+++..++.....-..... .......+..++.....+.....+..+|+.+....... ..+.. .-..+... +
T Consensus 263 v~lWd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~-~gh~~--~v~~l~~spd 335 (611)
T 1nr0_A 263 IKIWNVATLKVEKTIPVGTR----IEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVR-YGHNK--AITALSSSAD 335 (611)
T ss_dssp EEEEETTTTEEEEEEECCSS----GGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEE-CCCSS--CEEEEEECTT
T ss_pred EEEEeCCCCceeeeecCCCC----ccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEE-cCCCC--CEEEEEEeCC
Confidence 88999888765433110000 00000122223333222222347788888876633221 11110 12233333 4
Q ss_pred CEEEEEEecCCeEEEEEEe
Q 018593 253 GCLSVIEISDEWMETWVLK 271 (353)
Q Consensus 253 g~L~~v~~~~~~~~vw~l~ 271 (353)
|+..+.+..+..+.+|.++
T Consensus 336 g~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 336 GKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp SSEEEEEETTSCEEEEETT
T ss_pred CCEEEEEeCCCcEEEEECC
Confidence 6766666677889999664
No 239
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=27.66 E-value=3.8e+02 Score=25.03 Aligned_cols=193 Identities=12% Similarity=0.122 Sum_probs=95.0
Q ss_pred eecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCCc
Q 018593 92 ASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDGT 171 (353)
Q Consensus 92 ~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 171 (353)
++.+|.|++.. .....++.+++-......+-..... ... |+++|...+ .++.. +...
T Consensus 357 d~~~~~ly~sD-~~~~~I~r~~~~g~~~~~v~~~~~~--------~p~---GlAvD~~~~--~lY~t---------D~~~ 413 (619)
T 3s94_A 357 DPVEGYIYWTD-DEVRAIRRSFIDGSGSQFVVTAQIA--------HPD---GIAVDWVAR--NLYWT---------DTGT 413 (619)
T ss_dssp ETTTTEEEEEE-TTTTEEEEEETTSCSCEEEECSSCS--------CCC---EEEEETTTT--EEEEE---------ETTT
T ss_pred EcCCCeEEEEe-CCCCeEEEEEcCCCccEEEEECCCC--------CcC---ceEEecccC--cEEEE---------eCCC
Confidence 44567777775 3456677777765443333221110 111 677776433 34443 2235
Q ss_pred ceEEEEEcCCCcEEEeeeccccceeeeeecCceEEE---cceEEeeecCC-CEEEEEECCCceEEEeeCCCCCCCCCcee
Q 018593 172 FKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFV---NGALHWLTDSC-SFILALDLEGDVWRKISLPDKVGSESRSY 247 (353)
Q Consensus 172 ~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~---~g~ly~~~~~~-~~i~~~D~~~~~~~~~~~P~~~~~~~~~~ 247 (353)
..+++.+.....-+.... ..+ ....++.+ +|.|||..... ..|..++++...-..+. ..... ...-
T Consensus 414 ~~I~v~~~~G~~~~~l~~-~~l------~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~-~~~l~--~P~G 483 (619)
T 3s94_A 414 DRIEVTRLNGTMRKILIS-EDL------EEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLV-NTSLG--WPNG 483 (619)
T ss_dssp TEEEEEETTSCSCEEEEC-TTC------CSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCS--CEEE
T ss_pred CcEEEEeCCCCeEEEEEE-CCC------CCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEE-eCCCC--CCee
Confidence 678888876543233210 011 11123444 48999997432 48999998765433331 11110 2233
Q ss_pred EEEE--CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC--CcEEEEECCCCe
Q 018593 248 LLEC--DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH--KQVLVYHRNGRL 323 (353)
Q Consensus 248 l~~~--~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~yd~~~~~ 323 (353)
|+.. +++||++......++. ++-.+...=+... -.+ ..|. +++-.++.+|.... +.+...|..+++
T Consensus 484 lalD~~~~~LY~aD~~~~~I~~--~~~dG~~~~~~~~-~~l------~~P~-glav~~~~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 484 LALDYDEGKIYWGDAKTDKIEV--MNTDGTGRRVLVE-DKI------PHIF-GFTLLGDYVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEE--EESSSCCCEEEEE-CCC------CSSC-CEEEETTEEEEECTTSSCEEEEESSSCC
T ss_pred eEEcccCCEEEEEECCCCEEEE--EecCCCceEEEec-cCC------CCcE-EEEEECCEEEEeecCCCeEEEEEcCCCc
Confidence 4443 5899998775555444 4333322211111 011 1122 22222233555543 348999998885
Q ss_pred EEEe
Q 018593 324 WKEM 327 (353)
Q Consensus 324 ~~~v 327 (353)
-+.+
T Consensus 554 ~~~~ 557 (619)
T 3s94_A 554 REVI 557 (619)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5444
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=27.46 E-value=2.6e+02 Score=22.94 Aligned_cols=161 Identities=8% Similarity=-0.010 Sum_probs=88.0
Q ss_pred EEEeecCCCceEEEEEeeecccCCCCCCcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEE
Q 018593 143 GLACDLAKNKYNVVLAGYHRAFGHRPDGTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFIL 222 (353)
Q Consensus 143 ~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~ 222 (353)
|+.+++. + .++... + ..+...+.++|..+++=... ..+ +...+ .......++.+|........+.
T Consensus 25 Gl~~~~d--g-~Lyvst-----g--~~~~s~v~~iD~~tg~v~~~---i~l-~~~~f-geGi~~~g~~lyv~t~~~~~v~ 89 (266)
T 2iwa_A 25 GLVYAEN--D-TLFEST-----G--LYGRSSVRQVALQTGKVENI---HKM-DDSYF-GEGLTLLNEKLYQVVWLKNIGF 89 (266)
T ss_dssp EEEECST--T-EEEEEE-----C--STTTCEEEEEETTTCCEEEE---EEC-CTTCC-EEEEEEETTEEEEEETTCSEEE
T ss_pred cEEEeCC--C-eEEEEC-----C--CCCCCEEEEEECCCCCEEEE---Eec-CCCcc-eEEEEEeCCEEEEEEecCCEEE
Confidence 7777653 2 444431 1 12356899999999864332 111 11111 1113344678999987767999
Q ss_pred EEECCCce-EEEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc--cccC-ccceeee
Q 018593 223 ALDLEGDV-WRKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR--CIKG-MVPSIFP 298 (353)
Q Consensus 223 ~~D~~~~~-~~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~--~~~~-~~~~~~~ 298 (353)
+||..+.+ -..++.+ .. ....+..-+++|++.. ... .|+.++ .+ .-..+.+|+.. +... ....+ .
T Consensus 90 viD~~t~~v~~~i~~g-~~---~g~glt~Dg~~l~vs~-gs~--~l~viD-~~--t~~v~~~I~Vg~~~~p~~~~nel-e 158 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQ-MK---DGWGLATDGKILYGSD-GTS--ILYEID-PH--TFKLIKKHNVKYNGHRVIRLNEL-E 158 (266)
T ss_dssp EEETTTTEEEEEEECC-SS---SCCEEEECSSSEEEEC-SSS--EEEEEC-TT--TCCEEEEEECEETTEECCCEEEE-E
T ss_pred EEECCCCcEEEEEECC-CC---CeEEEEECCCEEEEEC-CCC--eEEEEE-CC--CCcEEEEEEECCCCcccccceeE-E
Confidence 99999854 4445655 12 2233444345677543 333 566663 33 23345555542 1110 11122 2
Q ss_pred eecCCcEEEEEeC--CcEEEEECCCCeEEEeeeec
Q 018593 299 ISQTREYVFLATH--KQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 299 ~~~~~~~v~~~~~--~~~~~yd~~~~~~~~v~~~~ 331 (353)
.. +|. ++.... +.+...|++|++....-.+.
T Consensus 159 ~~-dg~-lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 159 YI-NGE-VWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp EE-TTE-EEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred EE-CCE-EEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 22 565 677664 45999999999887766664
No 241
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=26.90 E-value=1.2e+02 Score=21.58 Aligned_cols=40 Identities=23% Similarity=0.401 Sum_probs=27.0
Q ss_pred ceEEEEccccc-ceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEe
Q 018593 107 GVYYVCNPMTR-EWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAG 159 (353)
Q Consensus 107 ~~~~v~NP~t~-~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 159 (353)
-.++.+||.|+ .|.+.-... .. +-+..|...+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~------------~~-V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA------------VT-VSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC------------EE-EEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc------------eE-EEEEEcCCCCEEEEEEcc
Confidence 46888999996 897543221 11 146678777889998863
No 242
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=26.62 E-value=2.7e+02 Score=22.87 Aligned_cols=107 Identities=15% Similarity=0.032 Sum_probs=54.8
Q ss_pred cceEEeeecCCCEEEEEECCC-ce-EEEeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEee
Q 018593 208 NGALHWLTDSCSFILALDLEG-DV-WRKISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKV 284 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~-~~-~~~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i 284 (353)
+|.....+.....|..||+.+ .. ...+..... .-..+... +|++.+++..+..+.+|.++. .+ .+..+
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~---~~--~~~~~ 256 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK----SISDMQFSPDLTYFITSSRDTNSFLVDVST---LQ--VLKKY 256 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEETTT---CC--EEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC----ceeEEEECCCCCEEEEecCCceEEEEECCC---Cc--eeeee
Confidence 454444444445899999987 33 222232211 12223333 466666666778899996633 22 22222
Q ss_pred ccccccCccceeeeeecCCcEEEEEeCC---------------cEEEEECCCCeEEEe
Q 018593 285 SLRCIKGMVPSIFPISQTREYVFLATHK---------------QVLVYHRNGRLWKEM 327 (353)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~~yd~~~~~~~~v 327 (353)
... .....+ .+..++..++..... .+..||.++++-...
T Consensus 257 ~~~---~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 310 (369)
T 3zwl_B 257 ETD---CPLNTA-VITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR 310 (369)
T ss_dssp ECS---SCEEEE-EECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEE
T ss_pred cCC---CCceeE-EecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh
Confidence 221 111223 344455545444332 488899888765544
No 243
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=24.94 E-value=3e+02 Score=22.91 Aligned_cols=109 Identities=16% Similarity=0.260 Sum_probs=53.9
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEE-ECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLE-CDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~-~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
++.+|..+... .|..-+=..++|+.+..+..... ....+.. -+++++++.... .|++-.| +...|.++.. +.
T Consensus 89 ~~~~~~~g~~g-~i~~S~DgG~tW~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~g---~v~~S~D-gG~tW~~~~~-~~ 161 (327)
T 2xbg_A 89 GNEGWIVGEPP-IMLHTTDGGQSWSQIPLDPKLPG-SPRLIKALGNGSAEMITNVG---AIYRTKD-SGKNWQALVQ-EA 161 (327)
T ss_dssp TTEEEEEEETT-EEEEESSTTSSCEECCCCTTCSS-CEEEEEEEETTEEEEEETTC---CEEEESS-TTSSEEEEEC-SC
T ss_pred CCeEEEEECCC-eEEEECCCCCCceECccccCCCC-CeEEEEEECCCCEEEEeCCc---cEEEEcC-CCCCCEEeec-CC
Confidence 45666555443 45543334578999865432111 1233443 457777665332 3555544 3388998753 21
Q ss_pred ccccCccceeeeeecCCcEEEEEeCCcEEEEECC-CCeEEEe
Q 018593 287 RCIKGMVPSIFPISQTREYVFLATHKQVLVYHRN-GRLWKEM 327 (353)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~-~~~~~~v 327 (353)
+. ....+ .+..++.++.....+.++.-+-. ..+|+.+
T Consensus 162 ~~---~~~~~-~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~ 199 (327)
T 2xbg_A 162 IG---VMRNL-NRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH 199 (327)
T ss_dssp CC---CEEEE-EECTTSCEEEEETTSSEEEEECTTCSSCEEE
T ss_pred Cc---ceEEE-EEcCCCcEEEEECCCcEEEEeCCCCCceeEC
Confidence 11 11122 33345554444444445544333 5666665
No 244
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=24.86 E-value=4.3e+02 Score=24.67 Aligned_cols=103 Identities=15% Similarity=0.104 Sum_probs=50.4
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc-
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL- 286 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~- 286 (353)
+|.+...+..+..|..+|+.+.+-.. .+.... .-..+....+...++...+..+.||.++. . ..+..+..
T Consensus 572 dg~~l~sg~~Dg~i~iwd~~~~~~~~-~~~~~~---~v~~~~~sp~~~~l~~~~~~~i~iwd~~~---~--~~~~~~~~~ 642 (694)
T 3dm0_A 572 DGSLCASGGKDGVVLLWDLAEGKKLY-SLEANS---VIHALCFSPNRYWLCAATEHGIKIWDLES---K--SIVEDLKVD 642 (694)
T ss_dssp TSSEEEEEETTSBCEEEETTTTEEEE-CCBCSS---CEEEEEECSSSSEEEEEETTEEEEEETTT---T--EEEEEECCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEE-EecCCC---cEEEEEEcCCCcEEEEEcCCCEEEEECCC---C--CChhhhccc
Confidence 45555555444588899998876322 222111 12233334333344444456689996633 1 22222221
Q ss_pred -c---------c------ccCccceeeeeecCCcEEEEEeCC-cEEEEECC
Q 018593 287 -R---------C------IKGMVPSIFPISQTREYVFLATHK-QVLVYHRN 320 (353)
Q Consensus 287 -~---------~------~~~~~~~~~~~~~~~~~v~~~~~~-~~~~yd~~ 320 (353)
. + ....+..+ .+..+|..++..... .+.+||+.
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 643 LKAEAEKADNSGPAATKRKVIYCTSL-NWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CC----------------CCCCEEEE-EECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccccccccccccCCceeEEeeeE-EEcCCCCEEEEEcCCCeEEEEecc
Confidence 0 0 00112223 456788866665544 48888875
No 245
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=24.78 E-value=4.3e+02 Score=24.62 Aligned_cols=60 Identities=15% Similarity=0.217 Sum_probs=36.6
Q ss_pred ceEEEEEcCCC--cEEEeeeccccceeeeeecCceEEEcceEEeeecC-----CCEEEEEECCCce--EEEe
Q 018593 172 FKCLVFDSESN--RWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDS-----CSFILALDLEGDV--WRKI 234 (353)
Q Consensus 172 ~~~~vy~s~~~--~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~-----~~~i~~~D~~~~~--~~~~ 234 (353)
..+..+|.++| .|+.... .. .........+++.+|.+|.-... ...|.+||..+++ |+.-
T Consensus 131 g~l~AlDa~TG~~~W~~~~~--~~-~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 131 GNVAALNAETGETVWKVENS--DI-KVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp SEEEEEETTTCCEEEEEECC--CG-GGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEEeecCC--CC-CccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 45667787776 5886521 11 11112234467789999876531 2489999998754 7665
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=24.17 E-value=3.9e+02 Score=24.00 Aligned_cols=108 Identities=16% Similarity=0.155 Sum_probs=60.6
Q ss_pred CEEEEEECCCceE-EEeeCCCC-CCCCCceeEEEE-CCE-EEEEEe-----cCCeEEEEEEecCCCCCeEEEEeecccc-
Q 018593 219 SFILALDLEGDVW-RKISLPDK-VGSESRSYLLEC-DGC-LSVIEI-----SDEWMETWVLKDYYRDEWHSVDKVSLRC- 288 (353)
Q Consensus 219 ~~i~~~D~~~~~~-~~~~~P~~-~~~~~~~~l~~~-~g~-L~~v~~-----~~~~~~vw~l~~~~~~~W~~~~~i~~~~- 288 (353)
..|..||..+.+- ..++++.. ... .+..++-. +|+ +|++.. ....+.+|..++ +.|.....|..+.
T Consensus 228 d~V~v~D~~~~k~~~tI~vg~~g~~P-~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~---g~~~~~~vIdi~~~ 303 (462)
T 2ece_A 228 NRIHFWDLRKRKRIHSLTLGEENRMA-LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED---GKWNAEKVIEIPAE 303 (462)
T ss_dssp CEEEEEETTTTEEEEEEESCTTEEEE-EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET---TEEEEEEEEEECCE
T ss_pred CEEEEEECCCCcEeeEEecCCCCCcc-ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC---CceeEEEEEeCCCc
Confidence 5899999988643 33455421 100 11111112 354 444444 344555665543 6788877764421
Q ss_pred -c--------------cCccceeeeeecCCcEEEEEeCC--cEEEEECC-CCeEEEeeeec
Q 018593 289 -I--------------KGMVPSIFPISQTREYVFLATHK--QVLVYHRN-GRLWKEMYSVK 331 (353)
Q Consensus 289 -~--------------~~~~~~~~~~~~~~~~v~~~~~~--~~~~yd~~-~~~~~~v~~~~ 331 (353)
. ......+ .+..+|+.+++...+ .|..||.. ..+.+.+..+.
T Consensus 304 ~v~~~lp~~~~~f~~~~~~pa~I-~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 304 PLEGNLPEILKPFKAVPPLVTDI-DISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVK 363 (462)
T ss_dssp ECCSSCCGGGGGGTEECCCCCCE-EECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred cccccccccccccccCCCceeEE-EECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEE
Confidence 0 1234455 678899988887654 49999985 44555555443
No 247
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=23.62 E-value=3.5e+02 Score=23.26 Aligned_cols=111 Identities=10% Similarity=0.057 Sum_probs=58.3
Q ss_pred cceEEeeecCCCEEEEEECCCceEEEe-eCCCCC----CCC---Cc-eeEEEE-C-CEEEEEEe-c-C------CeEEEE
Q 018593 208 NGALHWLTDSCSFILALDLEGDVWRKI-SLPDKV----GSE---SR-SYLLEC-D-GCLSVIEI-S-D------EWMETW 268 (353)
Q Consensus 208 ~g~ly~~~~~~~~i~~~D~~~~~~~~~-~~P~~~----~~~---~~-~~l~~~-~-g~L~~v~~-~-~------~~~~vw 268 (353)
++.+||... . .+..+|..+..-..+ ..+... ... .. ..+... + ++||+... . . ....
T Consensus 222 ~~~~~~vs~-~-~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~-- 297 (368)
T 1mda_H 222 PGMLVWAVA-S-SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS-- 297 (368)
T ss_dssp TTEEEECBS-S-CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE--
T ss_pred CCEEEEEcC-C-EEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE--
Confidence 467788877 4 899999976543333 121110 000 01 113332 3 56776544 2 2 2333
Q ss_pred EEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEE-Ee--CCcEEEEECCCCeEEEeee
Q 018593 269 VLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFL-AT--HKQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 269 ~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~-~~--~~~~~~yd~~~~~~~~v~~ 329 (353)
++ |. .....+.+|+.... ...+ .+..+|+.+++ .. .+.+.++|++|++...--.
T Consensus 298 Vi-D~--~t~~vv~~i~vg~~---p~gi-~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 298 SV-TA--SVGQTSGPISNGHD---SDAI-IAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp EE-ES--SSCCEEECCEEEEE---ECEE-EECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred EE-EC--CCCeEEEEEECCCC---cceE-EECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 33 32 34556777776331 2344 56667763444 43 3559999999987765433
No 248
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=22.94 E-value=4.5e+02 Score=24.21 Aligned_cols=213 Identities=9% Similarity=-0.054 Sum_probs=100.1
Q ss_pred Cee-EEeeecCCCceEEEEccc--c-cceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCCC
Q 018593 95 NGL-LCCSSIPEMGVYYVCNPM--T-REWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPDG 170 (353)
Q Consensus 95 ~Gl-l~~~~~~~~~~~~v~NP~--t-~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 170 (353)
+.. |.+.. .....+++++.. + ++...|...+.. . +.. ....+.+.+.++ +++....+..-.....+
T Consensus 90 g~~~la~~~-~~~~~l~~~~~~~~g~~~~~~l~~~~~~----~--~~~-~~~~~~~spDg~--~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 90 GGPLLVFTH-FGDQRLYAFEPDAPGGAVPRPLTPVSAV----G--GGL-RWADPVLLPERG--EVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp SSCEEEEEB-TTTCCEEEECTTSTTCCCCEECSCCCCS----T--TCE-EEEEEEEETTTT--EEEEEEEEECSSSTTCE
T ss_pred CCeEEEEEE-CCCCeEEEEcCCCCCCCCCEeccCCccC----C--CCc-cccCcEECCCCC--EEEEEEecccCCCCCCc
Confidence 444 55553 335678899886 4 776666553211 0 011 111455555432 34433211000000022
Q ss_pred cceEEEEEcCC------CcEEEeeeccccceeeeeecCceEEEcce-EEeeecCC-------CEEEEEECC-Cc---eEE
Q 018593 171 TFKCLVFDSES------NRWRKFVSVQDYYQFSIMNRNQVVFVNGA-LHWLTDSC-------SFILALDLE-GD---VWR 232 (353)
Q Consensus 171 ~~~~~vy~s~~------~~W~~~~~~~~~~~~~~~~~~~~v~~~g~-ly~~~~~~-------~~i~~~D~~-~~---~~~ 232 (353)
...+.+++..+ +.-+.... .- .. ........-+|+ |++..... ..|..+|+. ++ ...
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~--~~-~~--~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSD--DA-HR--FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSC--SC-SS--EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEe--cC-CC--cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 35677888877 65555420 11 10 111112223453 55555321 368889988 56 333
Q ss_pred EeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccc-c-ccCc--cceeeeeecCCcEEE
Q 018593 233 KISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLR-C-IKGM--VPSIFPISQTREYVF 307 (353)
Q Consensus 233 ~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~-~-~~~~--~~~~~~~~~~~~~v~ 307 (353)
.+.-.... ....+.-+ +|+|+++...+....||.++. ++.++..+...... . .... ...+ .+..++.+++
T Consensus 235 ~l~~~~~~---~~~~~~~spdg~l~~~~~~~~~~~l~~~~~-~~~~~~~l~~~~~~~~~p~w~~~~~~~-~~~~~~~~~~ 309 (662)
T 3azo_A 235 TLLGGPEE---AIAQAEWAPDGSLIVATDRTGWWNLHRVDP-ATGAATQLCRREEEFAGPLWTPGMRWF-APLANGLIAV 309 (662)
T ss_dssp EEEEETTB---CEEEEEECTTSCEEEEECTTSSCEEEEECT-TTCCEEESSCCSSBSSCCCCSTTCCSE-EECTTSCEEE
T ss_pred EeCCCCCc---eEcceEECCCCeEEEEECCCCCeEEEEEEC-CCCceeecccccccccCccccccCceE-eEeCCCEEEE
Confidence 33211111 12333333 688665555445567888753 23555543221111 0 0000 1123 4445777676
Q ss_pred EEeCC--cEEEEECCCCeEEEe
Q 018593 308 LATHK--QVLVYHRNGRLWKEM 327 (353)
Q Consensus 308 ~~~~~--~~~~yd~~~~~~~~v 327 (353)
....+ .++.+|+++++.+.+
T Consensus 310 ~~~~~~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 310 VHGKGAAVLGILDPESGELVDA 331 (662)
T ss_dssp EEBSSSCEEEEEETTTTEEEEC
T ss_pred EEEcCccEEEEEECCCCcEEEe
Confidence 66542 277789998887766
No 249
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=22.77 E-value=3.6e+02 Score=22.98 Aligned_cols=66 Identities=11% Similarity=0.055 Sum_probs=35.5
Q ss_pred CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCC-cEEEEEeC-CcEEEEECCCCeEE
Q 018593 252 DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTR-EYVFLATH-KQVLVYHRNGRLWK 325 (353)
Q Consensus 252 ~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~yd~~~~~~~ 325 (353)
+|++.+-+..+..+.||.+.... ........ ...+..+ .+..++ ..++.... +.+.+||+++++..
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~----~~~~~~~~---~~~v~~v-~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~ 222 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEG----PILAGYPL---SSPGISV-QFRPSNPNQLIVGERNGNIRIFDWTLNLSA 222 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTE----EEEEEEEC---SSCEEEE-EEETTEEEEEEEEETTSEEEEEETTCCC--
T ss_pred CCCEEEEEECCCeEEEEECCCCc----eeeeecCC---CCCcEEE-EECCCCCceEEecCCCCEEEEEECCCCccc
Confidence 56776666688999999885532 11111121 1112223 344444 33444443 44999999987654
No 250
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=22.39 E-value=4.2e+02 Score=23.69 Aligned_cols=195 Identities=11% Similarity=0.123 Sum_probs=0.0
Q ss_pred EeeecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCC
Q 018593 90 VRASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPD 169 (353)
Q Consensus 90 ~~~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 169 (353)
+.-+.+|-.+... .....+.+||...+....+...... .. ++.+.+.....-...-
T Consensus 350 ~~~s~~g~~l~~~-~~dg~v~~~~~~~~~~~~~~~~~~~---------v~---~~~~s~dg~~l~~~~~----------- 405 (577)
T 2ymu_A 350 VAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLTGHSSS---------VR---GVAFSPDGQTIASASD----------- 405 (577)
T ss_dssp EEECTTSSEEEEE-ETTSEEEEEETTCCEEEEEECCSSC---------EE---EEEECTTSSCEEEEET-----------
T ss_pred EEECCCCCEEEEE-eCCCEEEEEcCCCCEEEEecCCCCC---------eE---EEEECCCCCEEEEEeC-----------
Q ss_pred CcceEEEEEcCCCcEEEeeeccccceeeeeecCceEEEcceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCCCceeEE
Q 018593 170 GTFKCLVFDSESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSESRSYLL 249 (353)
Q Consensus 170 ~~~~~~vy~s~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~ 249 (353)
...+.+|+.....-+........ -....... +|.....+..+..+..+|...+....+...... ....-.
T Consensus 406 -d~~v~~~~~~~~~~~~~~~~~~~-v~~~~~s~-----d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~---v~~~~~ 475 (577)
T 2ymu_A 406 -DKTVKLWNRNGQLLQTLTGHSSS-VWGVAFSP-----DDQTIASASDDKTVKLWNRNGQLLQTLTGHSSS---VRGVAF 475 (577)
T ss_dssp -TSEEEEECTTCCEEEEEECCSSC-EEEEEECT-----TSSEEEEEETTSEEEEEETTSCEEEEEECCSSC---EEEEEE
T ss_pred -CCEEEEEeCCCCEEEEecCCCCC-eEEEEECC-----CCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCC---EEEEEE
Q ss_pred EECCEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCc-EEEEECCCCeEEEe
Q 018593 250 ECDGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQ-VLVYHRNGRLWKEM 327 (353)
Q Consensus 250 ~~~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~yd~~~~~~~~v 327 (353)
.-+|++.+.+..+..+.+| + .....+..+.- ....+..+ .+..++..++...... +.+||...+....+
T Consensus 476 spd~~~las~~~d~~i~iw---~---~~~~~~~~~~~--h~~~v~~l-~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 476 SPDGQTIASASDDKTVKLW---N---RNGQLLQTLTG--HSSSVRGV-AFSPDGQTIASASDDKTVKLWNRNGQLLQTL 545 (577)
T ss_dssp CTTSCEEEEEETTSEEEEE---E---TTSCEEEEEEC--CSSCEEEE-EECTTSSCEEEEETTSEEEEECTTSCEEEEE
T ss_pred cCCCCEEEEEeCCCEEEEE---c---CCCCEEEEEeC--CCCCEEEE-EEcCCCCEEEEEECcCEEEEEeCCCCEEEEE
No 251
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=22.37 E-value=3.7e+02 Score=23.01 Aligned_cols=112 Identities=10% Similarity=0.078 Sum_probs=58.9
Q ss_pred ceEEeeecCCCEEEEEECCCceEE-EeeCCCCCCCCCceeEEEE-CCEEEEEEecCCeEEEEEEecCCCCCeEEEEeecc
Q 018593 209 GALHWLTDSCSFILALDLEGDVWR-KISLPDKVGSESRSYLLEC-DGCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSL 286 (353)
Q Consensus 209 g~ly~~~~~~~~i~~~D~~~~~~~-~~~~P~~~~~~~~~~l~~~-~g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~ 286 (353)
|.+...+..+..|..+|+.+.+-. .+..+.... .-..+... +|++.+.+..+..+.+|.+.. ...+..+..
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~ 254 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG--AVSSICIDEECCVLILGTTRGIIDIWDIRF-----NVLIRSWSF 254 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC--CEEEEEECTTSCEEEEEETTSCEEEEETTT-----TEEEEEEBC
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC--ceEEEEECCCCCEEEEEcCCCeEEEEEcCC-----ccEEEEEec
Confidence 555555554469999999886643 334432221 12233333 467766666778899996643 233343332
Q ss_pred ccccCcccee-e--eeecCCcEEEEEeCC-cEEEEECCCCeEEEee
Q 018593 287 RCIKGMVPSI-F--PISQTREYVFLATHK-QVLVYHRNGRLWKEMY 328 (353)
Q Consensus 287 ~~~~~~~~~~-~--~~~~~~~~v~~~~~~-~~~~yd~~~~~~~~v~ 328 (353)
..... +..+ + .+..++.+++..... .+.+||+++++.....
T Consensus 255 ~~~~~-v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 255 GDHAP-ITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp TTCEE-EEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEE
T ss_pred CCCCc-eEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEE
Confidence 11110 1111 0 112355544444443 3999999988765543
No 252
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.34 E-value=92 Score=19.89 Aligned_cols=23 Identities=17% Similarity=0.482 Sum_probs=16.4
Q ss_pred EeCCcEEEEECCCC--eEEEeeeec
Q 018593 309 ATHKQVLVYHRNGR--LWKEMYSVK 331 (353)
Q Consensus 309 ~~~~~~~~yd~~~~--~~~~v~~~~ 331 (353)
..++++|.||..|+ .|++=..++
T Consensus 27 T~dGR~fyyN~~Tk~S~WekP~eLk 51 (73)
T 2dk7_A 27 TGDERVFFYNPTTRLSMWDRPDDLI 51 (73)
T ss_dssp ESSSCEEEEETTTTEECSSCCTTTT
T ss_pred CCCCCEEEecCcccceeccCChHhc
Confidence 45677999999998 455554444
No 253
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=22.08 E-value=5.2e+02 Score=24.66 Aligned_cols=117 Identities=9% Similarity=0.047 Sum_probs=60.7
Q ss_pred cceEEeeecCC----CEEEEEECCC-ceEEE-eeCCCCCCCCCceeEEEECCEEEEEEecCCeEEEEEEec------CCC
Q 018593 208 NGALHWLTDSC----SFILALDLEG-DVWRK-ISLPDKVGSESRSYLLECDGCLSVIEISDEWMETWVLKD------YYR 275 (353)
Q Consensus 208 ~g~ly~~~~~~----~~i~~~D~~~-~~~~~-~~~P~~~~~~~~~~l~~~~g~L~~v~~~~~~~~vw~l~~------~~~ 275 (353)
++.+|+++... ..|..+|..+ +.|.. + +|..... ....+...++.|++....+....+|.++- .++
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~l-i~~~~~~-~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~ 407 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVL-VDHSEDV-FMESIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKA 407 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEE-ECCCSSE-EEEEEEECSSEEEEEEEETTEEEEEEEECCTTTSCCCT
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeE-ECCCCCc-EEEEEEEECCEEEEEEEeCCEEEEEEEecccccccccC
Confidence 67788887642 5899999886 57765 3 2221110 11223334677776666666778887752 111
Q ss_pred CCeEEEEeeccccccCccceeee----eecCCcEEEEEeC----CcEEEEECCCCeEEEeee
Q 018593 276 DEWHSVDKVSLRCIKGMVPSIFP----ISQTREYVFLATH----KQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 276 ~~W~~~~~i~~~~~~~~~~~~~~----~~~~~~~v~~~~~----~~~~~yd~~~~~~~~v~~ 329 (353)
.. ....+.++...... .+.+ ...++.+++.... ..++.||+.+++.+.+..
T Consensus 408 g~--~~~~l~l~~~~~~~-~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~ 466 (751)
T 2xe4_A 408 GT--GLREVVMEEPIFTV-HLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKV 466 (751)
T ss_dssp TT--CCEECCCCCSSCEE-EECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEE
T ss_pred Cc--cceEECCCCceeEE-EeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence 11 01233332211100 1100 1123444444433 239999999988777653
No 254
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=21.75 E-value=1.6e+02 Score=20.61 Aligned_cols=42 Identities=10% Similarity=0.139 Sum_probs=27.1
Q ss_pred eEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEe
Q 018593 108 VYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAG 159 (353)
Q Consensus 108 ~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 159 (353)
.++++||.++.|... .... .+...+ .+..|...+.|.|+...
T Consensus 12 ~V~~~d~~~~~W~p~--~~g~-------~gvs~V-~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRWLPA--GTGP-------QAFSRV-QIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSCCBS--SCSC-------CCCEEE-EEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCceeEC--CCCC-------CCccEE-EEEEeCCCCEEEEEEEE
Confidence 567889999998633 2210 112122 57778888899998864
No 255
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=21.02 E-value=3.6e+02 Score=22.42 Aligned_cols=112 Identities=12% Similarity=0.187 Sum_probs=53.9
Q ss_pred cceEEeeecC--C--CEEEEEECCCceEEEeeCCCCCCC---C-Cc-eeEEEE-CCEEEEEEec-----CCeEEEEEEec
Q 018593 208 NGALHWLTDS--C--SFILALDLEGDVWRKISLPDKVGS---E-SR-SYLLEC-DGCLSVIEIS-----DEWMETWVLKD 272 (353)
Q Consensus 208 ~g~ly~~~~~--~--~~i~~~D~~~~~~~~~~~P~~~~~---~-~~-~~l~~~-~g~L~~v~~~-----~~~~~vw~l~~ 272 (353)
+|.+|..... . ..|..+| +.+. .++|..... . .. ..+... +|+|+++... ...+.+|.+
T Consensus 27 ~g~~~v~~~~~~~~~~~l~~~~--~g~~--~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~-- 100 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPEMQVAELT--QDGL--IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT-- 100 (343)
T ss_dssp TSCEEEEECGGGCCSCSEEEEE--TTEE--EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET--
T ss_pred CCCEEEEeCCCCCCceEEEEEC--CCCe--ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC--
Confidence 4666655321 1 2567777 4432 345532111 1 22 233333 4899998753 356555533
Q ss_pred CCCCCeEEEEeeccc--cccCccceeeeeecCCcEEEEEe-----CCcEEEEECCCCeEEEe
Q 018593 273 YYRDEWHSVDKVSLR--CIKGMVPSIFPISQTREYVFLAT-----HKQVLVYHRNGRLWKEM 327 (353)
Q Consensus 273 ~~~~~W~~~~~i~~~--~~~~~~~~~~~~~~~~~~v~~~~-----~~~~~~yd~~~~~~~~v 327 (353)
.+.+-.+...++.. ........+ .++.++..+++.. ...+++||+++++...+
T Consensus 101 -~tg~~~~~~~~~~~~~~~~~~~~~v-~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 101 -LNNQLSRVIYLPPPITLSNSFVNDL-AVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp -TTTEEEEEEECCTTTSCTTCCCCEE-EEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred -CCCeEEEEEECChhhcccccccceE-EEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 22332333333321 111222344 5564333355653 34599999998776554
No 256
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=20.98 E-value=5.4e+02 Score=24.41 Aligned_cols=192 Identities=11% Similarity=0.094 Sum_probs=100.7
Q ss_pred EeeecCeeEEeeecCCCceEEEEcccccceeeccCCCCCCCccccCCCceeEEEEEeecCCCceEEEEEeeecccCCCCC
Q 018593 90 VRASCNGLLCCSSIPEMGVYYVCNPMTREWKLLPKSRERPVTRFYPDGEATLVGLACDLAKNKYNVVLAGYHRAFGHRPD 169 (353)
Q Consensus 90 ~~~s~~Gll~~~~~~~~~~~~v~NP~t~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 169 (353)
++...+|.|.+.. ...++.+|+.|++... +..... .... .+. +. ++ .+ .++.
T Consensus 68 i~~d~~g~lWigT---~~Gl~~yd~~~~~f~~-~~~~~~-------~~i~---~i~-~~--~g-~l-Wigt--------- 119 (758)
T 3ott_A 68 GVIIDNTYLYMGT---DNGILVYNYRADRYEQ-PETDFP-------TDVR---TMA-LQ--GD-TL-WLGA--------- 119 (758)
T ss_dssp EEEETTTEEEEEE---TTEEEEEETTTTEECC-CSCCCC-------SCEE---EEE-EE--TT-EE-EEEE---------
T ss_pred EEEcCCCcEEEEe---CCCeEEEeCCCCEEEC-cccCCC-------ceEE---EEE-ec--CC-cE-EEEc---------
Confidence 3445577777763 3468899999987654 211111 1111 121 11 12 23 2321
Q ss_pred CcceEEEEEcCCCcEEEeeec-cccceeeeeecCceEEE--cceEEeeecCCCEEEEEECCCceEEEeeCCCCCCCC--C
Q 018593 170 GTFKCLVFDSESNRWRKFVSV-QDYYQFSIMNRNQVVFV--NGALHWLTDSCSFILALDLEGDVWRKISLPDKVGSE--S 244 (353)
Q Consensus 170 ~~~~~~vy~s~~~~W~~~~~~-~~~~~~~~~~~~~~v~~--~g~ly~~~~~~~~i~~~D~~~~~~~~~~~P~~~~~~--~ 244 (353)
...+..|+..++........ ..+ +.. .-..++. +|.+ |++... .+..||..++++..+..|...... .
T Consensus 120 -~~Gl~~~~~~~~~~~~~~~~~~~l-~~~---~i~~i~~d~~g~l-Wigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (758)
T 3ott_A 120 -LNGLYTYQLQSRKLTSFDTRRNGL-PNN---TIYSIIRTKDNQI-YVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLF 192 (758)
T ss_dssp -TTEEEEEETTTCCEEEECHHHHCC-SCS---CEEEEEECTTCCE-EEEETT-EEEEEETTTTEEEEECCCCCTTCSSCC
T ss_pred -CCcceeEeCCCCeEEEeccCCCCc-CCC---eEEEEEEcCCCCE-EEEeCC-CHhhCccCCCceEEecCCCccccccce
Confidence 12677888888877655111 111 100 0012333 4555 555553 899999999999887666432110 1
Q ss_pred ceeEEEE-CC-EEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeCCcEEEEECCCC
Q 018593 245 RSYLLEC-DG-CLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATHKQVLVYHRNGR 322 (353)
Q Consensus 245 ~~~l~~~-~g-~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~yd~~~~ 322 (353)
-..+.+- +| .|.+... . .++.++. ....+.....++. ..+..+ ..+.+|. +.+++.+.++.||.+++
T Consensus 193 i~~i~~d~~~~~lWigt~--~--Gl~~~~~-~~~~~~~~~~l~~----~~i~~i-~~d~~g~-lWigT~~Gl~~~~~~~~ 261 (758)
T 3ott_A 193 VNSLLEDTTRQCVWIGTE--G--YLFQYFP-STGQIKQTEAFHN----NSIKSL-ALDGNGD-LLAGTDNGLYVYHNDTT 261 (758)
T ss_dssp EEEEEEETTTTEEEEEEE--E--EEEEEET-TTTEEEEEEEEEE----EEEEEE-EECTTCC-EEEEETTEEEEECCTTS
T ss_pred eEEEEEECCCCEEEEEEC--C--CCeEEcC-CCCeEEeccCCCC----CeEEEE-EEcCCCC-EEEEeCCceeEEecCCC
Confidence 2334454 33 5776542 1 4555543 2244544333221 112233 4455777 78888778999999998
Q ss_pred eEEEe
Q 018593 323 LWKEM 327 (353)
Q Consensus 323 ~~~~v 327 (353)
+++.+
T Consensus 262 ~~~~~ 266 (758)
T 3ott_A 262 PLQHI 266 (758)
T ss_dssp CCEEE
T ss_pred cEEEE
Confidence 87765
No 257
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=20.76 E-value=3.3e+02 Score=21.91 Aligned_cols=34 Identities=15% Similarity=0.127 Sum_probs=23.3
Q ss_pred eeecCCcEEEEEeC-CcEEEEECCCCeEEEeeeec
Q 018593 298 PISQTREYVFLATH-KQVLVYHRNGRLWKEMYSVK 331 (353)
Q Consensus 298 ~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v~~~~ 331 (353)
.+..+|+.+++... +.+.+||+++++........
T Consensus 286 ~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 286 NVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred EECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 56677776666643 45999999998766554443
No 258
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=20.71 E-value=3.7e+02 Score=22.39 Aligned_cols=58 Identities=12% Similarity=0.023 Sum_probs=34.2
Q ss_pred cceEEeeecC-CCEEEEEECCCceEEEeeCCCCCCCCCceeEEEE--CCEEEEEEecCCeEEEE
Q 018593 208 NGALHWLTDS-CSFILALDLEGDVWRKISLPDKVGSESRSYLLEC--DGCLSVIEISDEWMETW 268 (353)
Q Consensus 208 ~g~ly~~~~~-~~~i~~~D~~~~~~~~~~~P~~~~~~~~~~l~~~--~g~L~~v~~~~~~~~vw 268 (353)
+|.|||.... ...|.++|+....-..+--.... ....|+.. +|+||++......+...
T Consensus 133 ~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~---~Pnglavd~~~~~lY~aD~~~~~I~~~ 193 (318)
T 3sov_A 133 SGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY---WPNGLTLDYEEQKLYWADAKLNFIHKS 193 (318)
T ss_dssp GTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS---CEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCC---CccEEEEeccCCEEEEEECCCCEEEEE
Confidence 5899999743 25899999986443333111111 23345554 68999887655554444
No 259
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=20.32 E-value=4.1e+02 Score=22.78 Aligned_cols=187 Identities=11% Similarity=0.115 Sum_probs=86.2
Q ss_pred CCceEEEEcccc--cceeeccCCCCCCCccccCCCceeEEEEEeecC-CCceEEEEEeeecccCCCCCCcceEEEEEc--
Q 018593 105 EMGVYYVCNPMT--REWKLLPKSRERPVTRFYPDGEATLVGLACDLA-KNKYNVVLAGYHRAFGHRPDGTFKCLVFDS-- 179 (353)
Q Consensus 105 ~~~~~~v~NP~t--~~~~~LP~~~~~~~~~~~~~~~~~~~~~g~d~~-~~~ykvv~~~~~~~~~~~~~~~~~~~vy~s-- 179 (353)
....++++||.+ .+..+|...... +....... +|+.+... .+.-.++++.. ......+++|+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~----~~~~~f~P-hGi~~~~d~dg~~~L~Vvnh-------~~~~s~ielf~~d~ 148 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNT----LDISSFNP-HGISTFIDDDNTVYLLVVNH-------PGSSSTVEVFKFQE 148 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSS----CCGGGCCE-EEEEEEECTTCCEEEEEEEC-------STTCCEEEEEEEET
T ss_pred CCCeEEEEecCCCCCceEEEEccCCC----CCcCceee-eeeEEEECCCCcEEEEEEEC-------CCCCCeEEEEEEEC
Confidence 456899999973 344444332210 00001111 25665443 34456666531 112456666554
Q ss_pred CCCcEEEeeeccccceeeeeecCceEEEcceEEeeecC-----------------CCEEEEEECCCceEEEe--eCCCCC
Q 018593 180 ESNRWRKFVSVQDYYQFSIMNRNQVVFVNGALHWLTDS-----------------CSFILALDLEGDVWRKI--SLPDKV 240 (353)
Q Consensus 180 ~~~~W~~~~~~~~~~~~~~~~~~~~v~~~g~ly~~~~~-----------------~~~i~~~D~~~~~~~~~--~~P~~~ 240 (353)
+++....+.+.... + ..+...-.+.-+|.+|.-... ...+..||+. +.+.+ .+.
T Consensus 149 ~~~~~~~~~~~~g~-~-~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~--- 221 (355)
T 3sre_A 149 EEKSLLHLKTIRHK-L-LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFD--- 221 (355)
T ss_dssp TTTEEEEEEEECCT-T-CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEES---
T ss_pred CCCEEEEEeccccC-C-CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCc---
Confidence 44555544333322 1 111112244456666543221 1468888885 23322 111
Q ss_pred CCCCceeEEEE-CC-EEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeec-CCcEEEEEe-CC--cE
Q 018593 241 GSESRSYLLEC-DG-CLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQ-TREYVFLAT-HK--QV 314 (353)
Q Consensus 241 ~~~~~~~l~~~-~g-~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~-~~~~v~~~~-~~--~~ 314 (353)
...-++.+ +| .||++......+.++.++.. .+......+.. ......+ .++. +|. +++.. .+ ++
T Consensus 222 ---~pNGia~spDg~~lYvadt~~~~I~~~~~~~~--g~l~~~~~~~~---~g~PDGi-~vD~e~G~-lwva~~~~g~~v 291 (355)
T 3sre_A 222 ---FANGINISPDGKYVYIAELLAHKIHVYEKHAN--WTLTPLRVLSF---DTLVDNI-SVDPVTGD-LWVGCHPNGMRI 291 (355)
T ss_dssp ---SEEEEEECTTSSEEEEEEGGGTEEEEEEECTT--SCEEEEEEEEC---SSEEEEE-EECTTTCC-EEEEEESCHHHH
T ss_pred ---ccCcceECCCCCEEEEEeCCCCeEEEEEECCC--CcEecCEEEeC---CCCCceE-EEeCCCCc-EEEEecCCceEE
Confidence 12234444 45 56666555666666656432 33333333332 2333456 7777 488 55533 22 25
Q ss_pred EEEECC
Q 018593 315 LVYHRN 320 (353)
Q Consensus 315 ~~yd~~ 320 (353)
+.||++
T Consensus 292 ~~~~P~ 297 (355)
T 3sre_A 292 FFYDAE 297 (355)
T ss_dssp HSCCTT
T ss_pred EEECCC
Confidence 555665
No 260
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=20.10 E-value=4.3e+02 Score=22.88 Aligned_cols=69 Identities=13% Similarity=0.025 Sum_probs=40.4
Q ss_pred CEEEEEEecCCeEEEEEEecCCCCCeEEEEeeccccccCccceeeeeecCCcEEEEEeC-CcEEEEECCCCeEEEeee
Q 018593 253 GCLSVIEISDEWMETWVLKDYYRDEWHSVDKVSLRCIKGMVPSIFPISQTREYVFLATH-KQVLVYHRNGRLWKEMYS 329 (353)
Q Consensus 253 g~L~~v~~~~~~~~vw~l~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~yd~~~~~~~~v~~ 329 (353)
|++.+.+..+..+.+|.+... .-.. .+ ..+....+..+ .+. ++..++.... +.+.+||+++++......
T Consensus 210 ~~~l~s~~~d~~i~vwd~~~~---~~~~--~~-~~~h~~~v~~~-~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 210 HQFIITSDRDEHIKISHYPQC---FIVD--KW-LFGHKHFVSSI-CCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp CEEEEEEETTSCEEEEEESCT---TCEE--EE-CCCCSSCEEEE-EEC-STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred CcEEEEEcCCCcEEEEECCCC---ceee--ee-ecCCCCceEEE-EEC-CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 666666667789999987542 2111 11 11222223334 455 7776666554 459999999987655443
Done!