BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018597
(353 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q42191|OXA1_ARATH Mitochondrial inner membrane protein OXA1 OS=Arabidopsis thaliana
GN=OXA1 PE=2 SV=2
Length = 429
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/348 (58%), Positives = 267/348 (76%), Gaps = 8/348 (2%)
Query: 1 MAYRRSLTTRATLIARAYNPSFNYIIYDHDHKQKSPDETLSRTNIHSFIQSRSFGNSLNN 60
MA+R++L+ R+ L AR P ++ I + DH++ S + S+ + HSF+ RS NS +
Sbjct: 1 MAFRQTLSIRSRLFARRNQPVYHIIPRESDHERDSFCQETSQRSYHSFLHQRSVNNS-DF 59
Query: 61 SYGLGNFFHGQRVSQFSLVPSVGSAFCRYMSTTVGEGADKIELISDVADVFTETTVQAI- 119
S G H L P+ G AF RYMS+ G G++KI ++SD+A+V T++T+Q +
Sbjct: 60 SKVSGGSLH------LPLAPTSGFAFYRYMSSAPGVGSEKIGVMSDIAEVITDSTLQDVP 113
Query: 120 ANQAPAVNEVAIAAADSFLPVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLIN 179
A A AV+EV +AAADSF P+AALQ ID +H FTGF WWASI+V T+LIR++TVPLLI
Sbjct: 114 AQAAAAVSEVTLAAADSFFPIAALQQCIDMVHTFTGFEWWASIVVATILIRSSTVPLLIK 173
Query: 180 QLKSTSKLTLMRPRLEEIKQDMQDKAMDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQ 239
Q+K T+KL LMRPRLE I+++MQ+K MD + +A+GQK+M+NLFKEYGV P TP+KG+FIQ
Sbjct: 174 QMKDTTKLALMRPRLESIREEMQNKGMDSVTMAEGQKKMKNLFKEYGVTPFTPMKGMFIQ 233
Query: 240 GPVFISFFLAISNMAEKVPSFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEG 299
GP+FI FFLAI NMAEKVPSF+ GGA WFTDL+TPDS YILP++TGL+FLITVECN QEG
Sbjct: 234 GPLFICFFLAIRNMAEKVPSFQTGGALWFTDLTTPDSLYILPVITGLTFLITVECNAQEG 293
Query: 300 LEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSNFFSLVYGL 347
+EGNP A T+K + R FA+L++P+TM+FP+AIFCYWITSN FSL+YGL
Sbjct: 294 MEGNPMAGTVKTVCRVFALLTVPMTMSFPQAIFCYWITSNLFSLMYGL 341
>sp|Q9SKD3|OXA1L_ARATH Mitochondrial inner membrane protein OXA1-like OS=Arabidopsis
thaliana GN=OXA1L PE=2 SV=1
Length = 431
Score = 355 bits (912), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/349 (53%), Positives = 242/349 (69%), Gaps = 16/349 (4%)
Query: 5 RSLTTRATLIARAYNPSFNYIIYDHDHKQKSPDETLSRTNIHSFIQSRSFGNSLNNSYGL 64
R +T R L+ R PS ++I D + KS S T I + + N + L
Sbjct: 6 RGITKRVNLLQRRVYPSCGHLIRDDRDETKSGS---SDTMIREVL-------ARNGTNKL 55
Query: 65 GNFFHGQRVSQFSLVP-SVGSAFCRYMSTTVGEGADKIELISDVA-DVFTETTVQAIANQ 122
+ F + F+ P +G + CR+MS+T E +DK++ I VA +V + ++A+
Sbjct: 56 SSMFADRHYQSFATGPLGLGLSSCRHMSSTPPEWSDKVDGIDFVATEVVPDEIIEAVTTT 115
Query: 123 A----PAVNEVAIAAADSFLPVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLI 178
+ PA+NEVAIAAADS PVAALQH IDA+H+FTG NWWASI +TT+LIR T+P+L+
Sbjct: 116 SQAVVPAINEVAIAAADSAFPVAALQHLIDAVHSFTGLNWWASIALTTVLIRGVTIPILL 175
Query: 179 NQLKSTSKLTLMRPRLEEIKQDMQDKAMDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFI 238
NQLK+T KL ++RP+LEE++Q+M KA DP A+A+GQ+RMQ LFKE+GV P TPLKGL I
Sbjct: 176 NQLKATYKLNVLRPQLEELRQEMSTKAQDPEAMAEGQRRMQLLFKEHGVTPFTPLKGLII 235
Query: 239 QGPVFISFFLAISNMAEKVPSFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQE 298
QGP+FISFF AI NMAEKVPSFK GG WFTDL+T D+ YILP+LT ++FLI VE NMQE
Sbjct: 236 QGPIFISFFFAIRNMAEKVPSFKTGGTLWFTDLTTTDTTYILPLLTAVTFLIMVESNMQE 295
Query: 299 GLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSNFFSLVYGL 347
GLEGNP A TMK SR A LSIP+ + KA+FCYW+TSN F+LVYGL
Sbjct: 296 GLEGNPVAGTMKKFSRIIAFLSIPVLIGIEKALFCYWLTSNLFTLVYGL 344
>sp|O43092|OXA12_SCHPO Mitochondrial inner membrane protein oxa1-2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=oxa102 PE=2 SV=2
Length = 409
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 123/223 (55%), Gaps = 9/223 (4%)
Query: 130 AIAAADSFLPVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTL 189
++ A+ SFLP LQ+ ++ +H ++G WWASI + +R A P+++ +K+++KL +
Sbjct: 87 SVLASFSFLPHNILQNGLNTLHIWSGLPWWASIAACAVAMRIAVFPIMLKMMKTSAKLAI 146
Query: 190 MRPRLEE----IKQDMQDKAMDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFIS 245
+ P++ E + + + + M A Q +QNL+K V+PL L QG +FIS
Sbjct: 147 INPKVAEHMSVLSKAKAEGNSELMMQATTQ--IQNLYKVNNVNPLNLLSAPVFQGILFIS 204
Query: 246 FFLAISNMAE-KVPSFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNP 304
FF A+ MA V F +GG +W DLS PD +I P+ GL L+ +E + G
Sbjct: 205 FFYALKTMAGVPVEGFTDGGFWWVNDLSQPDPLHIFPVANGLLMLLNIELGSETGSNKVA 264
Query: 305 AAVTMKNISRGFAVLSIPL-TMTFPKAIFCYWITSNFFSLVYG 346
+ +MK R F L+ PL TM FP AIF YW SN FS+ G
Sbjct: 265 MSPSMKKFFR-FLCLASPLFTMNFPMAIFMYWFPSNVFSVFQG 306
>sp|Q15070|OXA1L_HUMAN Mitochondrial inner membrane protein OXA1L OS=Homo sapiens GN=OXA1L
PE=1 SV=3
Length = 435
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 9/244 (3%)
Query: 104 ISDVADVFTETTVQAIANQAPAVNEVAIAAADSFLPVAALQHFIDAMHNFTGFNWWASII 163
+ +VA T VQ A Q+ A E+ + S+ PV +Q+ ++ MH G WW +I
Sbjct: 91 VPEVASGETADVVQTAAEQSFA--ELGLG---SYTPVGLIQNLLEFMHVDLGLPWWGAIA 145
Query: 164 VTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM--DPMAVADGQKRMQNL 221
T+ R PL++ + +++ P +++ +++ + D + M
Sbjct: 146 ACTVFARCLIFPLIVTGQREAARIHNHLPEIQKFSSRIREAKLAGDHIEYYKASSEMALY 205
Query: 222 FKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAE-KVPSFKNGGAFWFTDLSTPDSFYIL 280
K++G+ PL Q P+FISFF+A+ MA VPS + GG +WF DL+ D YIL
Sbjct: 206 QKKHGIKLYKPLILPVTQAPIFISFFIALREMANLPVPSLQTGGLWWFQDLTVSDPIYIL 265
Query: 281 PILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSNF 340
P+ + +E + G++ + M+N+ R ++++P+TM FP A+F YW++SN
Sbjct: 266 PLAVTATMWAVLELGAETGVQSSDLQ-WMRNVIRMMPLITLPITMHFPTAVFMYWLSSNL 324
Query: 341 FSLV 344
FSLV
Sbjct: 325 FSLV 328
>sp|Q8BGA9|OXA1L_MOUSE Mitochondrial inner membrane protein OXA1L OS=Mus musculus GN=Oxa1l
PE=2 SV=1
Length = 433
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 130/266 (48%), Gaps = 26/266 (9%)
Query: 104 ISDVADVFTETTVQAI----ANQAPA-VNEVAIA-AAD----------------SFLPVA 141
IS A +F E VQA A PA V EVA AAD S+ PV
Sbjct: 59 ISTSATLFAEAQVQAPPVIPATSIPAAVPEVASGGAADVVQCATEPSFTELGLGSYTPVG 118
Query: 142 ALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDM 201
+Q+ ++ +H G WW +I T+L R PL++ + +K+ P +++ +
Sbjct: 119 LIQNLLEYIHVDLGLPWWGAIATCTVLARCLVFPLIVKGQREAAKIHNHMPEMQKFSARI 178
Query: 202 QDKAM--DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAE-KVP 258
++ + D M K++ + L PL Q PVFISFF+A+ MA VP
Sbjct: 179 REAKLAGDQAEFYKATIEMTRYQKKHDIKLLRPLILPLTQAPVFISFFIALREMANLPVP 238
Query: 259 SFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAV 318
S + GG +WF DL+ D Y+LP++ + +E + G++ N M+NI R +
Sbjct: 239 SLQTGGLWWFQDLTVSDPIYVLPLVVTATMWCVLELGAETGVQSNDLQF-MRNIIRVMPL 297
Query: 319 LSIPLTMTFPKAIFCYWITSNFFSLV 344
+ +P+T+ FP A+F YW++SN FSL
Sbjct: 298 VVLPVTIHFPSAVFMYWLSSNVFSLC 323
>sp|Q3SYV3|OXA1L_BOVIN Mitochondrial inner membrane protein OXA1L OS=Bos taurus GN=OXA1L
PE=2 SV=1
Length = 441
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 122 QAPAVNEVAIAAADSFLPVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQL 181
QA A A S+ PV +Q+ ++ MH G WW +I T+L R PL++
Sbjct: 104 QAAAEQSFAELGLGSYTPVGLIQNLLEFMHVNLGLPWWGAIAACTVLARCLVFPLIVKGQ 163
Query: 182 KSTSKLTLMRPRLEEIKQDMQDKAM--DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQ 239
+ +K+ P +++ +++ + + M K++ + PL Q
Sbjct: 164 REAAKIHNHLPEIQKFSARIREAKLTGNHTEFYRASSEMTFYQKKHDIKLFRPLILPLTQ 223
Query: 240 GPVFISFFLAISNMAE-KVPSFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQE 298
P+FISFF+A+ MA VPS + GG +WF DL+ D Y+LP++ + +E +
Sbjct: 224 APIFISFFIALREMANLPVPSLQTGGLWWFQDLTLSDPIYVLPLVVTATMWGVLELGAET 283
Query: 299 GLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSNFFSL 343
G++ + M+N R + +P+T+ FP A+F YW++SN FSL
Sbjct: 284 GMQSSDLQ-WMRNFIRLMPLAVLPITIHFPTAVFMYWLSSNMFSL 327
>sp|O14300|OXA11_SCHPO Mitochondrial inner membrane protein oxa1-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=oxa101 PE=2 SV=1
Length = 374
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 122/236 (51%), Gaps = 28/236 (11%)
Query: 128 EVAIAAAD---SFLPVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKST 184
EV+ A + S+ P A +Q+ ++ + G WW SII+TTL +R A P++I +++
Sbjct: 53 EVSTATSGFNPSWWPYALIQNTAYTINVYAGAPWWVSIILTTLGVRLALTPVMIASFRNS 112
Query: 185 SKLTLMRP----RLEEIKQDMQDKAMDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQG 240
+KL++++P LE IK D D +A+ ++ ++ ++ V+P Q
Sbjct: 113 TKLSVIQPEMKKELEAIKTAKLDN--DQLALNQHSIALRGIYLKHNVNPFAIFILPLTQS 170
Query: 241 PVFISFFLAISNMAE-KVPSFKNGGAFWFTDLSTPDSFYILPIL-TGLSFLITVECNMQE 298
VF SFF AI M+ V F GG WF DLS PD + ILPI+ GL F
Sbjct: 171 AVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCILPIINAGLMF---------S 221
Query: 299 GLEGNPA--AVTMKNIS--RGF----AVLSIPLTMTFPKAIFCYWITSNFFSLVYG 346
G++ N A A T+ N + R F +LS LT P AIF YWI S+ F++V G
Sbjct: 222 GMQMNRANTASTIGNSTNWRTFFFLCCLLSPLLTAKLPAAIFMYWIPSSLFNIVQG 277
>sp|Q926Q5|YIDC2_LISIN Membrane protein insertase YidC 2 OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=yidC2 PE=3 SV=1
Length = 287
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 10/204 (4%)
Query: 140 VAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQ 199
V L I + G N+ IIV T+LIR +PL+I QLKS +T ++P+++E+++
Sbjct: 47 VFPLSWVITWFSDLFGGNYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTSLQPKIKELQE 106
Query: 200 DMQDKAMDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPS 259
K D Q+ L++E V+P+ L IQ P+ + F+ AIS AE
Sbjct: 107 KYSSK--DNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE---- 160
Query: 260 FKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVL 319
K W L PD +YILPI+ L+ ++ + +M + N +M I V+
Sbjct: 161 IKTDTFLWM-QLGNPDPYYILPIVAALTTFLSSKISMMGQTQQNK---SMAMIVYIMPVM 216
Query: 320 SIPLTMTFPKAIFCYWITSNFFSL 343
+ + +T P A+ YWI N F++
Sbjct: 217 ILFMGITLPSALALYWIIGNIFTV 240
>sp|Q814F4|YIDC2_BACCR Membrane protein insertase YidC 2 OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=yidC2 PE=3 SV=1
Length = 258
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 10/187 (5%)
Query: 157 NWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAMDPMAVADGQK 216
N+ +I++TTL+IR A +PL+I Q KST + ++P + ++K+ K D Q+
Sbjct: 58 NYGLAIVITTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKEKYSSK--DQATQQKLQQ 115
Query: 217 RMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAFWFTDLSTPDS 276
M L+++ GV+PL +F+Q P+ +F+ AI AE K WF DL D
Sbjct: 116 EMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTAE----IKQHSFLWF-DLGHADP 170
Query: 277 FYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWI 336
FYILP++ ++ I + M NP M + ++ + + FP A+ YW+
Sbjct: 171 FYILPVVAAITTFIQQKLAMAGTAGQNPQMAMMLWL---MPIMILIFAINFPAALSLYWV 227
Query: 337 TSNFFSL 343
N F +
Sbjct: 228 VGNIFGI 234
>sp|Q81JH1|YIDC2_BACAN Membrane protein insertase YidC 2 OS=Bacillus anthracis GN=yidC2
PE=3 SV=1
Length = 255
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 140 VAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQ 199
V L I N G N+ +I+VTTL+IR A +PL+I Q KST + ++P + ++K+
Sbjct: 41 VYPLSQLITYFANLFGSNYGLAIVVTTLIIRFALLPLMIKQTKSTKAMQALQPEMVKLKE 100
Query: 200 DMQDKAMDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPS 259
K D Q+ M L+++ GV+PL +F+Q P+ +F+ AI +E
Sbjct: 101 KYSSK--DQATQQKLQQEMMQLYQKNGVNPLAGCLPIFVQMPILFAFYHAIMRTSE---- 154
Query: 260 FKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVL 319
WF DL D +YILP++ ++ I + M NP M + ++
Sbjct: 155 ISKHTFLWF-DLGQADPYYILPVVAAITTFIQQKLAMAGTAGQNPQMAMMLWL---MPIM 210
Query: 320 SIPLTMTFPKAIFCYWITSNFFSL 343
+ + FP A+ YW+ N F +
Sbjct: 211 ILIFAINFPAALSLYWVVGNIFGI 234
>sp|A4J015|YIDC_FRATW Membrane protein insertase YidC OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=yidC PE=3 SV=1
Length = 551
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
++ +H+ G NW +II+ T LI+ PL +S +K+ +++PR++ +++ +D
Sbjct: 355 MNHIHSLVG-NWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD--- 410
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAF 266
D A+ K+M L+KE V+PL+ + IQ P+FIS + + E V + F
Sbjct: 411 DRQALG---KKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWV---LLESVELRQAPFIF 464
Query: 267 WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMT 326
W DLS D +++LP+L GLS +Q+ L PA + V+ L +
Sbjct: 465 WIHDLSMKDPYFVLPVLMGLSMF------LQQKLSPAPADPMQAKVMMFLPVIFTFLFAS 518
Query: 327 FPKAIFCYWITSNFFSL 343
FP + YW+T+N S+
Sbjct: 519 FPSGLVLYWLTNNLISI 535
>sp|Q5NI56|YIDC_FRATT Membrane protein insertase YidC OS=Francisella tularensis subsp.
tularensis (strain SCHU S4 / Schu 4) GN=yidC PE=3 SV=1
Length = 551
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
++ +H+ G NW +II+ T LI+ PL +S +K+ +++PR++ +++ +D
Sbjct: 355 MNHIHSLVG-NWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD--- 410
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAF 266
D A+ K+M L+KE V+PL+ + IQ P+FIS + + E V + F
Sbjct: 411 DRQALG---KKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWV---LLESVELRQAPFIF 464
Query: 267 WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMT 326
W DLS D +++LP+L GLS +Q+ L PA + V+ L +
Sbjct: 465 WIHDLSMKDPYFVLPVLMGLSMF------LQQKLSPAPADPMQAKVMMFLPVIFTFLFAS 518
Query: 327 FPKAIFCYWITSNFFSL 343
FP + YW+T+N S+
Sbjct: 519 FPSGLVLYWLTNNLISI 535
>sp|Q14JK8|YIDC_FRAT1 Membrane protein insertase YidC OS=Francisella tularensis subsp.
tularensis (strain FSC 198) GN=yidC PE=3 SV=1
Length = 551
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
++ +H+ G NW +II+ T LI+ PL +S +K+ +++PR++ +++ +D
Sbjct: 355 MNHIHSLVG-NWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD--- 410
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAF 266
D A+ K+M L+KE V+PL+ + IQ P+FIS + + E V + F
Sbjct: 411 DRQALG---KKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWV---LLESVELRQAPFIF 464
Query: 267 WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMT 326
W DLS D +++LP+L GLS +Q+ L PA + V+ L +
Sbjct: 465 WIHDLSMKDPYFVLPVLMGLSMF------LQQKLSPAPADPMQAKVMMFLPVIFTFLFAS 518
Query: 327 FPKAIFCYWITSNFFSL 343
FP + YW+T+N S+
Sbjct: 519 FPSGLVLYWLTNNLISI 535
>sp|B2SE60|YIDC_FRATM Membrane protein insertase YidC OS=Francisella tularensis subsp.
mediasiatica (strain FSC147) GN=yidC PE=3 SV=1
Length = 551
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
++ +H+ G NW +II+ T LI+ PL +S +K+ +++PR++ +++ +D
Sbjct: 355 MNHIHSLVG-NWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD--- 410
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAF 266
D A+ K+M L+KE V+PL+ + IQ P+FIS + + E V + F
Sbjct: 411 DRQALG---KKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWV---LLESVELRQAPFIF 464
Query: 267 WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMT 326
W DLS D +++LP+L GLS +Q+ L PA + V+ L +
Sbjct: 465 WIHDLSMKDPYFVLPVLMGLSMF------LQQKLSPAPADPMQAKVMMFLPVIFTFLFAS 518
Query: 327 FPKAIFCYWITSNFFSL 343
FP + YW+T+N S+
Sbjct: 519 FPSGLVLYWLTNNLISI 535
>sp|Q0BNY1|YIDC_FRATO Membrane protein insertase YidC OS=Francisella tularensis subsp.
holarctica (strain OSU18) GN=yidC PE=3 SV=1
Length = 551
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
++ +H+ G NW +II+ T LI+ PL +S +K+ +++PR++ +++ +D
Sbjct: 355 MNHIHSLVG-NWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD--- 410
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAF 266
D A+ K+M L+KE V+PL+ + IQ P+FIS + + E V + F
Sbjct: 411 DRQALG---KKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWV---LLESVELRQAPFIF 464
Query: 267 WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMT 326
W DLS D +++LP+L GLS +Q+ L PA + V+ L +
Sbjct: 465 WIHDLSMKDPYFVLPVLMGLSMF------LQQKLSPAPADPMQAKVMMFLPVIFTFLFAS 518
Query: 327 FPKAIFCYWITSNFFSL 343
FP + YW+T+N S+
Sbjct: 519 FPSGLVLYWLTNNLISI 535
>sp|Q2A5M8|YIDC_FRATH Membrane protein insertase YidC OS=Francisella tularensis subsp.
holarctica (strain LVS) GN=yidC PE=3 SV=1
Length = 551
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
++ +H+ G NW +II+ T LI+ PL +S +K+ +++PR++ +++ +D
Sbjct: 355 MNHIHSLVG-NWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD--- 410
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAF 266
D A+ K+M L+KE V+PL+ + IQ P+FIS + + E V + F
Sbjct: 411 DRQALG---KKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWV---LLESVELRQAPFIF 464
Query: 267 WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMT 326
W DLS D +++LP+L GLS +Q+ L PA + V+ L +
Sbjct: 465 WIHDLSMKDPYFVLPVLMGLSMF------LQQKLSPAPADPMQAKVMMFLPVIFTFLFAS 518
Query: 327 FPKAIFCYWITSNFFSL 343
FP + YW+T+N S+
Sbjct: 519 FPSGLVLYWLTNNLISI 535
>sp|A7N9L6|YIDC_FRATF Membrane protein insertase YidC OS=Francisella tularensis subsp.
holarctica (strain FTNF002-00 / FTA) GN=yidC PE=3 SV=1
Length = 551
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
++ +H+ G NW +II+ T LI+ PL +S +K+ +++PR++ +++ +D
Sbjct: 355 MNHIHSLVG-NWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD--- 410
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAF 266
D A+ K+M L+KE V+PL+ + IQ P+FIS + + E V + F
Sbjct: 411 DRQALG---KKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWV---LLESVELRQAPFIF 464
Query: 267 WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMT 326
W DLS D +++LP+L GLS +Q+ L PA + V+ L +
Sbjct: 465 WIHDLSMKDPYFVLPVLMGLSMF------LQQKLSPAPADPMQAKVMMFLPVIFTFLFAS 518
Query: 327 FPKAIFCYWITSNFFSL 343
FP + YW+T+N S+
Sbjct: 519 FPSGLVLYWLTNNLISI 535
>sp|A0Q419|YIDC_FRATN Membrane protein insertase YidC OS=Francisella tularensis subsp.
novicida (strain U112) GN=yidC PE=3 SV=1
Length = 551
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 16/197 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
++ +H+ G NW +II+ T LI+ PL +S +K+ +++PR++ +++ +D
Sbjct: 355 MNHIHSLVG-NWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRIKRLQETYKD--- 410
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAF 266
D A+ K+M L+KE V+PL+ + IQ P+FIS + + E V + F
Sbjct: 411 DRQALG---KKMMELYKEEKVNPLSGCLPMLIQIPIFISLYWV---LLESVELRQAPFIF 464
Query: 267 WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMT 326
W DLS D +++LP+L GLS +Q+ L PA + V+ L +
Sbjct: 465 WIHDLSMKDPYFVLPVLMGLSMF------LQQKLSPAPADPMQAKVMMFLPVIFTFLFAS 518
Query: 327 FPKAIFCYWITSNFFSL 343
FP + YW+T+N S+
Sbjct: 519 FPSGLVLYWLTNNLISI 535
>sp|Q9KDP2|YIDC2_BACHD Membrane protein insertase YidC 2 OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=yidC2 PE=3 SV=1
Length = 280
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 21/219 (9%)
Query: 140 VAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQ 199
V + I + N ++ SII+ T+LIR A +PL + Q KS + ++RP +E I++
Sbjct: 42 VYPMSWLITTVANLLNGSYGLSIIIVTILIRLALLPLTLKQQKSMRAMQVIRPEMEAIQK 101
Query: 200 DMQDK-AMDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVP 258
++K + DP + QK + L++++GV+P+ LFIQ P+ ++F+ AI E
Sbjct: 102 KYKEKGSKDPKVQQEMQKELLGLYQKHGVNPMAGCLPLFIQLPILMAFYFAIMRTEE--- 158
Query: 259 SFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNM---QEGLEGNPA---------- 305
+ WF DL PD YILP + G++ + M Q+ + NP+
Sbjct: 159 -IRYHTFLWF-DLGQPD--YILPFVAGITTYFQFKMTMSHQQQMQKTNPSDSDNPMANMM 214
Query: 306 AVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSNFFSLV 344
+ MK + V+ I ++ P A+ YW+ N F ++
Sbjct: 215 QMQMKVMLYVMPVMIIIAGLSLPSALSLYWVIGNIFMII 253
>sp|Q81XH4|YIDC1_BACAN Membrane protein insertase YidC 1 OS=Bacillus anthracis GN=yidC1
PE=3 SV=1
Length = 260
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 139 PVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIK 198
P++ + F+ H+ G ++ +II+ TL+IR+A +PL ++Q +S +K+ M+P L+++K
Sbjct: 44 PISFMIQFVA--HHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQKLK 101
Query: 199 QDMQDKAMDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVP 258
Q D + D QK M L K G +PL L IQ P+F + + AIS E
Sbjct: 102 QKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEIRT 161
Query: 259 SFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAV 318
S F + +L D ++ILPI+ L+ I ++ G V M + + +
Sbjct: 162 S-----TFLWVNLGHADPYHILPIIAALTTFIQMKVFQSNSTSGE--QVQMLKMQQ-IMM 213
Query: 319 LSIPLTMTF--PKAIFCYWITSNFFSLV 344
++ L M F P + YWIT N F+++
Sbjct: 214 PAMILFMGFAAPSGLVLYWITGNLFTMM 241
>sp|Q8Y3I2|YIDC2_LISMO Membrane protein insertase YidC 2 OS=Listeria monocytogenes serovar
1/2a (strain ATCC BAA-679 / EGD-e) GN=yidC2 PE=3 SV=1
Length = 287
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 155 GFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAMDPMAVADG 214
G ++ IIV T+LIR +PL+I QLKS +T ++P+++E+++ K D
Sbjct: 62 GGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSK--DNETKQKL 119
Query: 215 QKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAFWFTDLSTP 274
Q+ L++E V+P+ L IQ P+ + F+ AIS AE K W L P
Sbjct: 120 QQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE----IKTDSFLWM-QLGNP 174
Query: 275 DSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCY 334
D +YILP++ L+ ++ + +M + N +M I V+ + + +T P A+ Y
Sbjct: 175 DPYYILPVVAALTTFLSSKISMMGQTQQNK---SMAMIVYIMPVMILFMGITLPSALALY 231
Query: 335 WITSNFFSL 343
WI N F++
Sbjct: 232 WIIGNIFTV 240
>sp|Q71VQ8|YIDC1_LISMF Membrane protein insertase YidC 1 OS=Listeria monocytogenes
serotype 4b (strain F2365) GN=yidC1 PE=3 SV=1
Length = 287
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 155 GFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAMDPMAVADG 214
G ++ IIV T+LIR +PL+I QLKS +T ++P+++E+++ K D
Sbjct: 62 GGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIKELQEKYSSK--DNETKQKL 119
Query: 215 QKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAFWFTDLSTP 274
Q+ L++E V+P+ L IQ P+ + F+ AIS AE K W L P
Sbjct: 120 QQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE----IKTDSFLWM-QLGNP 174
Query: 275 DSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCY 334
D +YILP++ L+ ++ + +M + N +M I V+ + + +T P A+ Y
Sbjct: 175 DPYYILPVVAALTTFLSSKISMMGQTQQNK---SMAMIVYIMPVMILFMGITLPSALALY 231
Query: 335 WITSNFFSL 343
WI N F++
Sbjct: 232 WIIGNIFTV 240
>sp|B0TW73|YIDC_FRAP2 Membrane protein insertase YidC OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=yidC PE=3 SV=1
Length = 551
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
++ +H+ G NW +II+ T LI+ PL +S +K+ +++PR++ +++ +D
Sbjct: 355 MNQIHSLVG-NWGLAIILVTCLIKLIFYPLSAKSYRSMAKMRMLQPRVKRLQETYKD--- 410
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAF 266
D + K+M ++KE V+PL+ + IQ P+FIS + + E V + F
Sbjct: 411 DRQVLG---KKMMEMYKEEKVNPLSGCLPMLIQIPIFISLYWV---LLESVELRQAPFIF 464
Query: 267 WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMT 326
W DLS D +++LPIL G+S +Q+ L PA I V+ L +
Sbjct: 465 WIHDLSMKDPYFVLPILMGISMF------LQQKLSPAPADPMQAKIMMFLPVIFTFLFAS 518
Query: 327 FPKAIFCYWITSNFFSLV 344
FP + YW+T+N S++
Sbjct: 519 FPSGLVLYWLTNNVISIL 536
>sp|Q9M3B7|FBL54_ARATH Putative F-box/LRR-repeat protein At3g49150 OS=Arabidopsis thaliana
GN=At3g49150 PE=4 SV=2
Length = 630
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 1 MAYRRSLTTRATLIARAYNPSFNYIIYDHDHKQKSPDETLSRTNIHSFIQSRSFGNSLNN 60
M RR+L+ R+ AR Y PS + II D ++ P + SF+ RSF +S+
Sbjct: 450 MDLRRTLSLRSLFNARCYQPSCSGIIQRDDVHEEKP-------HYGSFLHQRSFSSSMIL 502
Query: 61 SYGLGNFFHGQRV-SQFSLVPSVGSAFCRYMSTTVGEGADKIELISDVADVFTETTVQAI 119
S H R S F L G + R MST+ G+D+ ++ VA+ T+
Sbjct: 503 SQQ-----HMMRSPSHFPLCSPFGVSTYRPMSTSHISGSDESGDVNHVAETLTDLV---- 553
Query: 120 ANQAPAVNEVAIAAADSFLPVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLIN 179
Q V EVA AA DS + + +Q + +H+ TG NWWASI+ TT LIR T+PL+I
Sbjct: 554 --QQDTVIEVADAAIDSSIQLDFVQQIVHNVHSLTGLNWWASIVFTTFLIRGVTIPLMIE 611
Query: 180 QLKSTSKLTLMR 191
+ SK +++
Sbjct: 612 CERWFSKRMVIK 623
>sp|O87567|YIDC_BACPE Membrane protein insertase YidC OS=Bacillus pseudofirmus (strain
OF4) GN=yidC PE=3 SV=2
Length = 252
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 12/185 (6%)
Query: 161 SIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDM-QDKAMDPMAVADGQKRMQ 219
SIIV T+ IR +PL+I Q KS+ + +RP +E +++ Q DP QK +
Sbjct: 61 SIIVVTIGIRLFLLPLMIKQQKSSRAMQALRPEMEALQKKYGQGTKRDPKDQQKMQKELM 120
Query: 220 NLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAFWFTDLSTPDSFYI 279
L+K+ GV+P+ LFIQ PV ++F+ AI M +V + + WF DL +PD YI
Sbjct: 121 ALYKDSGVNPMAGCLPLFIQLPVMMAFYFAI--MRTEVIALHS--FLWF-DLGSPDPLYI 175
Query: 280 LPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSN 339
LP++ G++ + V+ + N MK I V+ + +T P A+ YW+ N
Sbjct: 176 LPVVAGITTFLQVKMT---SFQLND---QMKVIIYIMPVMIVVAGVTLPSALSLYWVVGN 229
Query: 340 FFSLV 344
F ++
Sbjct: 230 LFMII 234
>sp|Q8N8Q8|COX18_HUMAN Mitochondrial inner membrane protein COX18 OS=Homo sapiens GN=COX18
PE=2 SV=1
Length = 333
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 38/243 (15%)
Query: 130 AIAAADSFLPVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTA-TVPLLINQLKSTSKLT 188
A+AA+ PV + + +H TG WW SI+++T+ +R A T+PL Q +K+
Sbjct: 57 ALAASS---PVRVAEEVLLGVHAATGLPWWGSILLSTVALRGAVTLPLAAYQHYILAKVE 113
Query: 189 LMRPRLEEIKQDMQDKAMDPMAVADGQ-------------KRMQNLFKEYGV----HPLT 231
++P ++ I + + + +AV Q K M+ L E V HP
Sbjct: 114 NLQPEIKTIARHLNQE----VAVRANQLGWSKRDARLTYLKNMRRLISELYVRDNCHPFK 169
Query: 232 PLKGLFIQGPVFISFFLAISNMAEKVP---------SFKNGGAFWFTDLSTPDSFYILPI 282
++IQ P++I A+ N++ GG WF DL+ PDS +ILPI
Sbjct: 170 ATVLVWIQLPMWIFMSFALRNLSTGAAHSEGFSVQEQLATGGILWFPDLTAPDSTWILPI 229
Query: 283 LTGLSFLITVE-CNMQE-GLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSNF 340
G+ L+ VE C +Q+ G+ +T R +VL IP+ T P +I YW+ S+F
Sbjct: 230 SVGVINLLIVEICALQKIGMSRFQTYITY--FVRAMSVLMIPIAATVPSSIVLYWLCSSF 287
Query: 341 FSL 343
L
Sbjct: 288 VGL 290
>sp|Q815V9|YIDC1_BACCR Membrane protein insertase YidC 1 OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=yidC1 PE=3 SV=1
Length = 260
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 8/205 (3%)
Query: 139 PVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIK 198
P++ + F+ H+ G ++ +II+ TL+IR+A +PL ++Q +S +K+ M+P L+++K
Sbjct: 44 PISFMIQFVA--HHIPGASFGIAIIIMTLVIRSAMIPLAVSQYRSQAKMKKMQPELQKLK 101
Query: 199 QDMQDKAMDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVP 258
+ D + D QK M L K G +PL L IQ P+F + + AIS E
Sbjct: 102 KKYGDVSKDLEKQKQYQKEMSELMKSGGWNPLAGCWPLLIQMPIFSALYYAISRTEEIRT 161
Query: 259 SFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAV 318
S +F + +L D ++ILPI+ L+ I ++ Q + +K
Sbjct: 162 S-----SFLWVNLGHADPYHILPIIAALTTFIQMKV-FQSNITPGEQVQMLKMQQIMMPA 215
Query: 319 LSIPLTMTFPKAIFCYWITSNFFSL 343
+ + + P + YWIT N F++
Sbjct: 216 MILFMGFAAPSGLVLYWITGNLFTM 240
>sp|P39952|OXA1_YEAST Mitochondrial inner membrane protein OXA1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=OXA1 PE=1
SV=1
Length = 402
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 24/259 (9%)
Query: 101 IELISDVADVFTETTVQAIANQAPAVNEVA--------IAAADS-FLPVAALQHFIDAMH 151
I+ ++ A + +T IAN V E++ I A + + P +QH ++A+H
Sbjct: 62 IDELTSSAPSLSASTSDLIANTTQTVGELSSHIGYLNSIGLAQTWYWPSDIIQHVLEAVH 121
Query: 152 NFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAMDPMAV 211
++G WW +I TT+LIR PL + + ++ + ++P L+ + +K M +
Sbjct: 122 VYSGLPWWGTIAATTILIRCLMFPLYVKSSDTVARNSHIKPELDA----LNNKLMSTTDL 177
Query: 212 ADGQ---KRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAE-KVPSFKNGGAFW 267
GQ + + L +G+ L +Q P+ + FF A+ +MA V F N G W
Sbjct: 178 QQGQLVAMQRKKLLSSHGIKNRW-LAAPMLQIPIALGFFNALRHMANYPVDGFANQGVAW 236
Query: 268 FTDLSTPDSFYILPILTGLSFLITVECNMQEGLE--GNPAAVTMKNISRGFAVLSIPLTM 325
FTDL+ D + L ++T F+ + G + +P MK + ++SIP TM
Sbjct: 237 FTDLTQADPYLGLQVITAAVFISFTRLGGETGAQQFSSP----MKRLFTILPIISIPATM 292
Query: 326 TFPKAIFCYWITSNFFSLV 344
A+ Y+ + FS++
Sbjct: 293 NLSSAVVLYFAFNGAFSVL 311
>sp|Q15MS7|YIDC_PSEA6 Membrane protein insertase YidC OS=Pseudoalteromonas atlantica
(strain T6c / ATCC BAA-1087) GN=yidC PE=3 SV=1
Length = 543
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 31/207 (14%)
Query: 146 FIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKA 205
F+ +H+ G NW SII+ T++++ A PL Q +S +K+ ++P+++ +K+ D
Sbjct: 343 FLQFIHSLIG-NWGFSIILITIVVKGAMYPLTKAQYESMAKMRALKPKMDALKERYGD-- 399
Query: 206 MDPMAVADGQKRMQNLFKEYGVHPLTPLKGLF---IQGPVFISFFLAISNMAEKVPSFKN 262
D QK Q + + Y + P+ G F +Q P+F++ + + E V
Sbjct: 400 -------DKQKMQQAMMEMYKKDKVNPMGGCFPLLLQMPIFLALYWV---LLESVELRHA 449
Query: 263 GGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIP 322
FW TDLS D +++LPILTGLS + + +TM + + + +P
Sbjct: 450 NFIFWITDLSVKDPYFVLPILTGLSMYLLQKLQ----------PMTMTDPMQQKIMQFMP 499
Query: 323 LTMT-----FPKAIFCYWITSNFFSLV 344
+ M+ FP + YW+ SN +L+
Sbjct: 500 VAMSLFFFIFPAGLVLYWLISNIITLI 526
>sp|Q8E6W4|YIDC1_STRA3 Membrane protein insertase YidC 1 OS=Streptococcus agalactiae
serotype III (strain NEM316) GN=yidC1 PE=3 SV=1
Length = 271
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 162 IIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAMDPMAVADGQKRMQNL 221
II+ TL+IR +PL Q+KS+ K+ ++PRL+E+++ K DP + MQ++
Sbjct: 58 IILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGK--DPDSRLKLNDEMQSM 115
Query: 222 FKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAFWFTDLSTPDSFYILP 281
+K GV+P + L IQ PV + F A++ + SF G F +LS PD +YILP
Sbjct: 116 YKAEGVNPYASVLPLLIQLPVLWALFQALTRV-----SFLKVGTFLSLELSQPDPYYILP 170
Query: 282 ILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSNFF 341
+L L ++ + +E N A+T+ F +L + F + YW SN F
Sbjct: 171 VLAALFTFLSTWLTNKAAVEKN-IALTLMTYVMPFIILVT--SFNFASGVVLYWTVSNAF 227
Query: 342 SL 343
+
Sbjct: 228 QV 229
>sp|Q8CX16|YIDC1_STRA5 Membrane protein insertase YidC 1 OS=Streptococcus agalactiae
serotype V (strain ATCC BAA-611 / 2603 V/R) GN=yidC1
PE=3 SV=1
Length = 271
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 162 IIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAMDPMAVADGQKRMQNL 221
II+ TL+IR +PL Q+KS+ K+ ++PRL+E+++ K DP MQ++
Sbjct: 58 IILFTLIIRAIMMPLYNMQMKSSQKMQEIQPRLKELQKKYPGK--DPDNRLKLNDEMQSM 115
Query: 222 FKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAFWFTDLSTPDSFYILP 281
+K GV+P + L IQ PV + F A++ + SF G F +LS PD +YILP
Sbjct: 116 YKAEGVNPYASVLPLLIQLPVLWALFQALTRV-----SFLKVGTFLSLELSQPDPYYILP 170
Query: 282 ILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSNFF 341
+L L ++ + +E N A+T+ F +L + F + YW SN F
Sbjct: 171 VLAALFTFLSTWLTNKAAVEKN-IALTLMTYVMPFIILVT--SFNFASGVVLYWTVSNAF 227
Query: 342 SL 343
+
Sbjct: 228 QV 229
>sp|P60037|YIDC_WOLSU Membrane protein insertase YidC OS=Wolinella succinogenes (strain
ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC
602W) GN=yidC PE=3 SV=1
Length = 536
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
+D ++ F G NW +I++ TL++R PL + S KL + P+++EI++ +
Sbjct: 329 LDWLYKFCG-NWGWAIVLLTLVVRIILFPLTYKGMVSMQKLKDIAPKMKEIQEKYKG--- 384
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGG-A 265
DP + Q M L+K++G +P+ L +Q P+F + + + N E K
Sbjct: 385 DPQKL---QVHMMELYKKHGANPMGGCLPLLLQMPIFFAIYRVLYNAIE----LKGADWI 437
Query: 266 FWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLT- 324
W DLS D ++ILPIL G S +Q+ L P T + F L + T
Sbjct: 438 LWINDLSVMDPYFILPILMGASMF------LQQHL--TPTTFTDPMQEKVFKFLPLIFTF 489
Query: 325 --MTFPKAIFCYWITSNFFSLVYGL 347
+TFP + YW SN FS+ L
Sbjct: 490 FFVTFPSGLVLYWFVSNVFSIAQQL 514
>sp|C4LDZ4|YIDC_TOLAT Membrane protein insertase YidC OS=Tolumonas auensis (strain DSM
9187 / TA4) GN=yidC PE=3 SV=1
Length = 549
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 145 HFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDK 204
+ +H G NW +II+ T+++R PL Q S +K+ L++P+L +++ + D
Sbjct: 346 QLLQFLHGLVG-NWGVAIILITMIVRGVMYPLSKAQYTSMAKMRLLQPKLTALRERLGD- 403
Query: 205 AMDPMAVADGQKR---MQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFK 261
D QK M L+KE V+PL L IQ P+FI+ + + E V
Sbjct: 404 --------DRQKMSQAMMELYKEEKVNPLGGCFPLLIQMPIFIALYW---TLMESVELRH 452
Query: 262 NGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSI 321
A W TDLS D +Y+LP+L G + + +P VT + + I
Sbjct: 453 APFALWLTDLSVKDPYYVLPLLMGATMWYIQKM--------SPTTVTDPMQQKVMQFMPI 504
Query: 322 PLT---MTFPKAIFCYWITSNFFSLV 344
T + FP + YW+ SN +++
Sbjct: 505 VFTFMFLWFPSGLTLYWVVSNIVTII 530
>sp|A4STS5|YIDC_AERS4 Membrane protein insertase YidC OS=Aeromonas salmonicida (strain
A449) GN=yidC PE=3 SV=1
Length = 548
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 153 FTGF--NWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAMDPMA 210
F GF NW +II+ TLL+R PL Q S +K+ +++P+L +K+ D D
Sbjct: 351 FQGFVHNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKLAALKERFSD---DRQK 407
Query: 211 VADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAFWFTD 270
++ G M L+K+ V+PL + +Q P+FI+ + A + E V A W TD
Sbjct: 408 MSQG---MMELYKKEKVNPLGGCLPILVQMPIFIALYWA---LMESVELRHAPFALWITD 461
Query: 271 LSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLT---MTF 327
LS D F++LPIL G S + +P +T + + I T + F
Sbjct: 462 LSVKDPFFVLPILMGASMWYLQKM--------SPTTITDPMQQKVMQFMPIIFTFMFLWF 513
Query: 328 PKAIFCYWITSNFFSL 343
P + YW+ SN S+
Sbjct: 514 PAGLTLYWLVSNVISI 529
>sp|Q5R7D0|COX18_PONAB Mitochondrial inner membrane protein COX18 OS=Pongo abelii GN=COX18
PE=2 SV=1
Length = 334
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 39/244 (15%)
Query: 130 AIAAADSFLPVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTA-TVPLLINQLKSTSKLT 188
A+AA+ PV + + +H TG WW SI ++T +R A T+PL Q +K+
Sbjct: 57 ALAASS---PVRVAEEVLLGVHAATGLPWWGSIPLSTAALRGAVTLPLAAYQHYILAKVE 113
Query: 189 LMRPRLEEIKQDMQDKAMDPMAVADGQ-------------KRMQNLFKEYGV----HPLT 231
++P ++ I + + + +AV Q K M+ L E V HP
Sbjct: 114 NLQPEIKTIARHLNQE----VAVRANQLGWSKRDARLTYLKNMRRLISELYVRDNCHPFK 169
Query: 232 PLKGLFIQGPVFISFFLAISNMAEKVP----------SFKNGGAFWFTDLSTPDSFYILP 281
++IQ P++I A+ N++ GG WF+DL+ PD +ILP
Sbjct: 170 ATVLVWIQLPMWIFMSFALRNLSTGAAHSEAGFSVEEQLAAGGILWFSDLTAPDPTWILP 229
Query: 282 ILTGLSFLITVE-CNMQE-GLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSN 339
+ G+ L+ VE C +Q+ G+ +T R +VL IP+ T P +I YW+ S+
Sbjct: 230 VSLGVINLLIVEICVLQKIGMSRFQTYITY--FVRAMSVLMIPIAATVPSSIVLYWLCSS 287
Query: 340 FFSL 343
F L
Sbjct: 288 FVGL 291
>sp|O13375|OXA1_SACSE Mitochondrial inner membrane protein OXA1 OS=Saccharomyces
servazzii GN=OXA1 PE=3 SV=1
Length = 371
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 34/286 (11%)
Query: 85 AFCRYMSTTVGEGADKIELISDVA------DVFTETTVQAIANQAPAVNEVA-------- 130
+ R +T D E IS+V D T T + + +V E++
Sbjct: 16 SLGRRFKSTSETLNDLPETISEVQTQLPSIDQMTNATADIVEQASHSVGELSTHIGYLNS 75
Query: 131 IAAADSF-LPVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTL 189
I A ++ P +QH ++ +H +TG WW +I T+L+R P+ + + +K +
Sbjct: 76 IGLAQTWHWPADIIQHALEYVHVYTGLPWWGTICTVTILVRLLMFPIYVKSSDTIAKNSR 135
Query: 190 MRPRLEEIKQDMQDKAMDPMAVADGQK---RMQNLFKEYGVHPLTPLKGLFIQGPVFISF 246
++P+++++ +++ M +A+GQK R + L E G+ L +Q P+ I F
Sbjct: 136 IKPQMDKVTKEL----MATTDLAEGQKIAVRRRKLLSENGIKNRW-LAAPMLQLPIAIGF 190
Query: 247 FLAISNMAE-KVPSFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPA 305
F A+ +MA V F N G WF DL+ D + GL F+ L G
Sbjct: 191 FNALRSMANFPVDGFANQGILWFHDLTLSDPYL------GLQFITAAVLMSFSRLGGETG 244
Query: 306 AVTMKN-ISRGFAVL---SIPLTMTFPKAIFCYWITSNFFSLVYGL 347
A + R F +L SIP TM ++ Y+ + FS++ L
Sbjct: 245 AQQFSGPMKRFFIILPLVSIPATMNLSTSVVLYFAINGTFSVLQTL 290
>sp|Q0K5C1|YIDC_CUPNH Membrane protein insertase YidC OS=Cupriavidus necator (strain ATCC
17699 / H16 / DSM 428 / Stanier 337) GN=yidC PE=3 SV=1
Length = 555
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 146 FIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKA 205
++ +H F G NW SII T+LI+ PL KS K+ ++PR+ I++ ++
Sbjct: 353 LLEKLHGFLG-NWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERYKN-- 409
Query: 206 MDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGA 265
DP + + M L+K V+PL + IQ PVFI+ + + + E + G
Sbjct: 410 -DPQKM---NQEMMGLYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLG-- 463
Query: 266 FWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTM 325
W DLS PD FYILPI+ +S + + N P V K ++ +PL
Sbjct: 464 -WIHDLSVPDPFYILPIVMAVSMFVQTKLN-----PTPPDPVQAK------VMMIMPLVF 511
Query: 326 T-----FPKAIFCYWITSNFFSL 343
+ FP + YW+ +N S+
Sbjct: 512 SVMFFFFPAGLVLYWVVNNILSI 534
>sp|Q8VC74|COX18_MOUSE Mitochondrial inner membrane protein COX18 OS=Mus musculus GN=Cox18
PE=2 SV=5
Length = 331
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 31/236 (13%)
Query: 139 PVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTA-TVPLLINQLKSTSKLTLMRPRLEEI 197
PV + + TG WW++II++T+ +R A T+PL Q +K+ ++P +++I
Sbjct: 60 PVRTAEEVLLGAQEATGLPWWSNIILSTVALRGAVTLPLAAYQHYILAKVENLQPEIKDI 119
Query: 198 KQDMQDKAMDPMAVADGQ-------------KRMQNLFKEYGV----HPLTPLKGLFIQG 240
+ + + +AV Q K M+ L E V HP +++Q
Sbjct: 120 AKRLNQE----VAVCARQFGWSKRVARLTYLKNMRRLISELYVRDNCHPFKATVLVWVQL 175
Query: 241 PVFISFFLAISNMAEKV---------PSFKNGGAFWFTDLSTPDSFYILPILTGLSFLIT 291
P+++ +A+ N++ GG WF DL+ DS +ILP+ G+ L+
Sbjct: 176 PMWVFISVALRNLSTGATHSDGISVQEQLAAGGTLWFPDLTAVDSTWILPVSVGVVNLLI 235
Query: 292 VECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMTFPKAIFCYWITSNFFSLVYGL 347
VE + + + + + N R +VL IP+ T P A+ YW+ S+ L L
Sbjct: 236 VEIFALQKIGTSRFQMYVTNFVRAVSVLMIPVAATVPSALVLYWLCSSLMGLAQNL 291
>sp|A4T0N2|YIDC_POLSQ Membrane protein insertase YidC OS=Polynucleobacter necessarius
subsp. asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=yidC PE=3 SV=1
Length = 557
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 28/204 (13%)
Query: 146 FIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKA 205
++ +HN G NW SII+ T+LI+ A PL KS +++ ++PRL +K+ +
Sbjct: 360 LLEHIHNIVG-NWGWSIILLTVLIKLAFFPLSAASYKSMARMKEVQPRLAAMKEQYK--- 415
Query: 206 MDPMAVADGQKRMQNLFKEYGVHPLTPLKG---LFIQGPVFISFFLAISNMAEKVPSFKN 262
+ QK Q + + Y + PL G + IQ PVFIS + + + S +
Sbjct: 416 ------GEPQKLNQAMMEMYRKEKINPLGGCLPVVIQIPVFISLYWVL------LSSVEM 463
Query: 263 GGA---FWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVL 319
GA W DLS PD +YILP++ +S + + N P V K + V
Sbjct: 464 RGAPWILWIHDLSVPDPYYILPVVMAVSMFVQTKLNPTP-----PDPVQAKVMMYMPIVF 518
Query: 320 SIPLTMTFPKAIFCYWITSNFFSL 343
SI + FP + YW+T+N S+
Sbjct: 519 SI-MFFFFPAGLVLYWVTNNLLSI 541
>sp|C5BF61|YIDC_EDWI9 Membrane protein insertase YidC OS=Edwardsiella ictaluri (strain
93-146) GN=yidC PE=3 SV=1
Length = 541
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 146 FIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKA 205
+ +H+F G NW +II+ T ++R PL Q S +K+ +++P+L+ +++ + D
Sbjct: 338 LLQLIHSFVG-NWGFAIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLQAMRERIGD-- 394
Query: 206 MDPMAVADGQKRMQNLFKEYGVHPLTPLKGLF---IQGPVFIS-FFLAISNMAEKVPSFK 261
D Q+ Q + Y + PL G F IQ P+F++ +++ + ++ + F
Sbjct: 395 -------DKQRMSQEMMALYKTEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPF- 446
Query: 262 NGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVT---MKNISRGFAV 318
A W DL+ PD FYILPIL G++ + +P VT + I V
Sbjct: 447 ---ALWIHDLAAPDPFYILPILMGVTMFFIQKM--------SPTTVTDPMQQKIMTFMPV 495
Query: 319 LSIPLTMTFPKAIFCYWITSNFFSLV 344
+ + FP + Y+I SN +++
Sbjct: 496 IFTVFFLWFPSGLVLYYIVSNLVTII 521
>sp|A0KQZ7|YIDC_AERHH Membrane protein insertase YidC OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=yidC PE=3
SV=1
Length = 548
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 153 FTGF--NWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAMDPMA 210
F GF NW +II+ TLL+R PL Q S +K+ +++P+L +++ D D
Sbjct: 351 FHGFVQNWGVAIIMLTLLVRGIMFPLTKAQYTSMAKMRMLQPKLAALRERFGD---DRQK 407
Query: 211 VADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAFWFTD 270
++ G M L+K+ V+PL + +Q P+FI+ + A + E V A W TD
Sbjct: 408 MSQG---MMELYKKEKVNPLGGCLPILVQMPIFIALYWA---LMESVELRHAPFALWITD 461
Query: 271 LSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLT---MTF 327
LS D F++LPIL G S + +P +T + + I T + F
Sbjct: 462 LSVKDPFFVLPILMGASMWYLQKM--------SPTTITDPMQQKVMQFMPIIFTFMFLWF 513
Query: 328 PKAIFCYWITSNFFSL 343
P + YW+ SN S+
Sbjct: 514 PAGLTLYWLVSNVISI 529
>sp|Q5P4P4|YIDC_AROAE Membrane protein insertase YidC OS=Aromatoleum aromaticum (strain
EbN1) GN=yidC PE=3 SV=1
Length = 550
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 18/195 (9%)
Query: 150 MHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDM-QDKAMDP 208
+H G NW +II+ T+LI+ PL KS +K+ ++ PR++ +K+ DK
Sbjct: 353 IHGVVG-NWGWAIIIVTILIKLMFFPLSAASYKSMAKMRVLGPRMQRLKELYGNDK---- 407
Query: 209 MAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGAFWF 268
A Q+ M ++++ ++PL + +Q PVFIS + + E + G W
Sbjct: 408 ---AKMQQEMMEMYRKEKINPLGGCLPILVQIPVFISLYWVLLGSVEMRQAPWLG---WI 461
Query: 269 TDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTMTFP 328
DLS D ++ILP++ G+S LI ++ N P + V+ + + FP
Sbjct: 462 QDLSAKDPYFILPVIMGVSMLIQMKLN------PTPPDPIQAKVMMAMPVIFTFMFLWFP 515
Query: 329 KAIFCYWITSNFFSL 343
+ YW+ +N S+
Sbjct: 516 SGLVLYWVVNNILSI 530
>sp|B3R883|YIDC_CUPTR Membrane protein insertase YidC OS=Cupriavidus taiwanensis (strain
R1 / LMG 19424) GN=yidC PE=3 SV=1
Length = 559
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 146 FIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKA 205
++ +H F G NW SII T+LI+ PL KS K+ ++PR+ I++ ++
Sbjct: 357 LLEKLHGFLG-NWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERYKN-- 413
Query: 206 MDPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPSFKNGGA 265
DP + + M L++ V+PL + IQ PVFI+ + + + E + G
Sbjct: 414 -DPQKM---NQEMMALYRTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLG-- 467
Query: 266 FWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTM 325
W DLS PD FYILPI+ +S + + N P V K ++ +PL
Sbjct: 468 -WIHDLSVPDPFYILPIVMAVSMFVQTKLN-----PTPPDPVQAK------VMMIMPLVF 515
Query: 326 T-----FPKAIFCYWITSNFFSL 343
+ FP + YW+ +N S+
Sbjct: 516 SVMFFFFPAGLVLYWVVNNILSI 538
>sp|A7N0X9|YIDC_VIBHB Membrane protein insertase YidC OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=yidC PE=3 SV=1
Length = 540
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 139 PVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIK 198
P+ +L FI +F G NW +II T ++R A PL Q S +K+ +++P+L+ ++
Sbjct: 336 PLHSLLAFI---QSFVG-NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMR 391
Query: 199 QDMQDKAMDPMAVADGQK---RMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAE 255
+ + D D Q+ M L+K+ V+PL L +Q P+FI+ + A+ E
Sbjct: 392 ERIGD---------DRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALMESVE 442
Query: 256 --KVPSFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVT---MK 310
P F W DLS D +YILP+L G S + + +P VT +
Sbjct: 443 LRHSPFFG-----WIHDLSAQDPYYILPLLMGASMFLIQKM--------SPTTVTDPMQQ 489
Query: 311 NISRGFAVLSIPLTMTFPKAIFCYWITSNFFSLV 344
I V+ + FP + YW+ SN +L+
Sbjct: 490 KIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLI 523
>sp|Q87TR5|YIDC_VIBPA Membrane protein insertase YidC OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=yidC PE=3 SV=1
Length = 540
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 139 PVAALQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIK 198
P+ +L FI +F G NW +II T ++R A PL Q S +K+ +++P+L+ ++
Sbjct: 336 PLHSLLAFI---QSFVG-NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMR 391
Query: 199 QDMQDKAMDPMAVADGQK---RMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAE 255
+ + D D Q+ M L+K+ V+PL L +Q P+FI+ + A+ E
Sbjct: 392 ERIGD---------DRQRMSQEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWALMESVE 442
Query: 256 --KVPSFKNGGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVT---MK 310
P F W DLS D +YILP+L G S + + +P VT +
Sbjct: 443 LRHSPFFG-----WIHDLSAQDPYYILPLLMGASMFLIQKM--------SPTTVTDPMQQ 489
Query: 311 NISRGFAVLSIPLTMTFPKAIFCYWITSNFFSLV 344
I V+ + FP + YW+ SN +L+
Sbjct: 490 KIMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTLI 523
>sp|C3LP77|YIDC_VIBCM Membrane protein insertase YidC OS=Vibrio cholerae serotype O1
(strain M66-2) GN=yidC PE=3 SV=1
Length = 541
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 143 LQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQ 202
L + + F G NW +II T ++R A PL Q S +K+ +++P+L+ +++ +
Sbjct: 338 LHWLLSVIQTFVG-NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIG 396
Query: 203 DKAMDPMAVADGQK---RMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPS 259
D D Q+ M L+K+ V+PL + +Q P+FI+ + A+ E
Sbjct: 397 D---------DRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVE---- 443
Query: 260 FKNGGAF-WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAV 318
++ F W DLS D +YILP+L G S + + +P +T +
Sbjct: 444 LRHSPFFGWIHDLSAQDPYYILPLLMGASMFVIQKM--------SPTTITDPMQQKIMTF 495
Query: 319 LSIPLT---MTFPKAIFCYWITSNFFSLV 344
+ + T + FP + YW+ SN +L+
Sbjct: 496 MPVMFTFFFLWFPSGLVLYWLVSNIVTLI 524
>sp|Q9KVY4|YIDC_VIBCH Membrane protein insertase YidC OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=yidC PE=3
SV=1
Length = 541
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 143 LQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQ 202
L + + F G NW +II T ++R A PL Q S +K+ +++P+L+ +++ +
Sbjct: 338 LHWLLSVIQTFVG-NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIG 396
Query: 203 DKAMDPMAVADGQK---RMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPS 259
D D Q+ M L+K+ V+PL + +Q P+FI+ + A+ E
Sbjct: 397 D---------DRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVE---- 443
Query: 260 FKNGGAF-WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAV 318
++ F W DLS D +YILP+L G S + + +P +T +
Sbjct: 444 LRHSPFFGWIHDLSAQDPYYILPLLMGASMFVIQKM--------SPTTITDPMQQKIMTF 495
Query: 319 LSIPLT---MTFPKAIFCYWITSNFFSLV 344
+ + T + FP + YW+ SN +L+
Sbjct: 496 MPVMFTFFFLWFPSGLVLYWLVSNIVTLI 524
>sp|A5F484|YIDC_VIBC3 Membrane protein insertase YidC OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=yidC PE=3 SV=1
Length = 541
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 143 LQHFIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQ 202
L + + F G NW +II T ++R A PL Q S +K+ +++P+L+ +++ +
Sbjct: 338 LHWLLSVIQTFVG-NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIG 396
Query: 203 DKAMDPMAVADGQK---RMQNLFKEYGVHPLTPLKGLFIQGPVFISFFLAISNMAEKVPS 259
D D Q+ M L+K+ V+PL + +Q P+FI+ + A+ E
Sbjct: 397 D---------DRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVE---- 443
Query: 260 FKNGGAF-WFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAV 318
++ F W DLS D +YILP+L G S + + +P +T +
Sbjct: 444 LRHSPFFGWIHDLSAQDPYYILPLLMGASMFVIQKM--------SPTTITDPMQQKIMTF 495
Query: 319 LSIPLT---MTFPKAIFCYWITSNFFSLV 344
+ + T + FP + YW+ SN +L+
Sbjct: 496 MPVMFTFFFLWFPSGLVLYWLVSNIVTLI 524
>sp|A4Y1A0|YIDC_PSEMY Membrane protein insertase YidC OS=Pseudomonas mendocina (strain
ymp) GN=yidC PE=3 SV=1
Length = 581
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 146 FIDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKA 205
++ +H G NW SIIV T++I+ PL +S +++ + P+L+ +K+ D
Sbjct: 381 LLEVIHGLLG-NWGWSIIVLTIIIKLIFFPLSAASYRSMARMRAVSPKLQALKEQHGD-- 437
Query: 206 MDPMAVADGQKRMQNLFKEYGVHPLTPLKG---LFIQGPVFISFFLAISNMAEKVPSFKN 262
D QK Q + + Y + PL G + +Q PVF++ + + E V +
Sbjct: 438 -------DRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWV---LLESVEMRQA 487
Query: 263 GGAFWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIP 322
FW TDLS D F+ILPI+ G + I Q+ L P + + ++
Sbjct: 488 PWMFWITDLSIKDPFFILPIIMGATMFI------QQQLNPTPPDPMQARVLKLMPIIFTF 541
Query: 323 LTMTFPKAIFCYWITSNFFSL 343
+ FP + YW+ +N S+
Sbjct: 542 FFLWFPAGLVLYWVVNNILSI 562
>sp|P29431|YIDC_BUCAP Membrane protein insertase YidC OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=yidC PE=3 SV=3
Length = 536
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 147 IDAMHNFTGFNWWASIIVTTLLIRTATVPLLINQLKSTSKLTLMRPRLEEIKQDMQDKAM 206
+ +HNF G NW SII+ T +++ T PL Q S SK+ ++P++ E+K++
Sbjct: 339 LSTIHNFIG-NWGFSIILITFMMKAITYPLTKAQYTSMSKMRELQPKINELKKNF---GH 394
Query: 207 DPMAVADGQKRMQNLFKEYGVHPLTPLKGLFIQGPVFIS-FFLAISNMAEKVPSFKNGGA 265
D ++ K + L+K+ ++PL +FIQ P+F+S +++ I ++ + F
Sbjct: 395 DKQRMS---KEIMALYKKEKINPLGGCLPVFIQMPIFLSLYYMLIGSVELRHAPF----L 447
Query: 266 FWFTDLSTPDSFYILPILTGLSFLITVECNMQEGLEGNPAAVTMKNISRGFAVLSIPLTM 325
FW DLS D +Y+LPI GL+ +Q N + + I + +
Sbjct: 448 FWIKDLSDQDPYYVLPIFMGLTMFF-----IQRTSSNNISDPFQQKIMHFMPFIFTVFFL 502
Query: 326 TFPKAIFCYWITSNFFSLV 344
FP + Y+I SN +++
Sbjct: 503 WFPSGLVLYYIVSNLVTII 521
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,628,396
Number of Sequences: 539616
Number of extensions: 4862371
Number of successful extensions: 13295
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 11995
Number of HSP's gapped (non-prelim): 474
length of query: 353
length of database: 191,569,459
effective HSP length: 118
effective length of query: 235
effective length of database: 127,894,771
effective search space: 30055271185
effective search space used: 30055271185
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)