Query 018599
Match_columns 353
No_of_seqs 164 out of 402
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 03:08:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018599.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018599hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1txoa_ d.219.1.1 (A:) putativ 98.8 1.6E-08 1.2E-12 87.5 10.2 97 209-313 10-119 (235)
2 d1a6qa2 d.219.1.1 (A:2-296) Pr 98.1 3.6E-07 2.6E-11 82.5 3.0 93 216-313 34-151 (295)
3 d1yqsa1 e.3.1.1 (A:3-347) D-al 10.4 80 0.0058 26.4 3.2 46 286-331 20-65 (345)
4 d2qalg1 a.75.1.1 (G:2-151) Rib 8.7 1.4E+02 0.01 23.4 3.9 41 250-292 37-85 (150)
5 d2c2aa2 d.122.1.3 (A:321-481) 7.1 2.6E+02 0.019 21.0 4.8 39 273-311 56-95 (161)
6 d1y0na_ d.291.1.1 (A:) Hypothe 6.6 1.1E+02 0.008 22.2 2.0 20 320-341 5-24 (78)
7 d1m5sa2 d.58.33.1 (A:146-297) 6.1 1.1E+02 0.0082 24.8 2.0 21 219-241 1-21 (152)
8 d1husa_ a.75.1.1 (A:) Ribosoma 6.1 1.8E+02 0.013 22.4 3.2 41 250-292 30-78 (139)
9 d1jt6a2 a.121.1.1 (A:73-187) M 5.9 1.3E+02 0.0096 22.3 2.2 44 231-278 62-106 (115)
10 d2o3la1 a.69.4.1 (A:14-95) Hyp 5.6 1.7E+02 0.012 21.0 2.6 28 232-259 53-80 (82)
No 1
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.75 E-value=1.6e-08 Score=87.46 Aligned_cols=97 Identities=19% Similarity=0.237 Sum_probs=64.0
Q ss_pred CCCCCCCCCCceEEEecCCeeEEeeecccccccCCCChHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHhCC------
Q 018599 209 HPAKEETGGEDAHFICGDEQVIGVADGVGGWADVGVDAGEFARELMSHSFRAVQEESTHAIDPARVLEKAHSST------ 282 (353)
Q Consensus 209 hp~K~~~gGEDA~FIs~~~~aiGVADGVGGWa~~GVDPglFSReLM~~c~~~i~ee~~~~idP~~LL~~Ay~~t------ 282 (353)
|+-.....-|||||+.. ..+|||||+|||.. |.++..++......+.++ ....++.+.|++++++.
T Consensus 10 ~~G~~R~~nEDa~~~~~--~l~~V~DG~GG~~~-----g~~as~~~~~~l~~~~~~-~~~~~~~~~l~~~~~~~~~~l~~ 81 (235)
T d1txoa_ 10 DRGLVRANNEDSVYAGA--RLLALADGMGGHAA-----GEVASQLVIAALAHLDDD-EPGGDLLAKLDAAVRAGNSAIAA 81 (235)
T ss_dssp ECCSSCSSCCEEEEECS--SEEEEEEEECTTTH-----HHHHHHHHHHHHGGGGSS-CCCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCccccCC--CEEEEEeCCCCcHH-----HHHHHHHHHHHHHHHhhc-cCcccHHHHHHHHHHHHHHHHHH
Confidence 33333345699999954 89999999998653 566665555443322221 23456766666665432
Q ss_pred -------CCCCCceEEEEEEecCceEEEEeeccCceee
Q 018599 283 -------KAKGSSTACIIALTSKVFCFYISLASHAHYF 313 (353)
Q Consensus 283 -------~~~GSSTACVa~L~~~gL~vaNlGDS~~~~f 313 (353)
....++|++++.++++.++++|+|||..-++
T Consensus 82 ~~~~~~~~~~~gtt~~~~~~~~~~l~~anvGDSr~~l~ 119 (235)
T d1txoa_ 82 QVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLL 119 (235)
T ss_dssp HHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEE
T ss_pred HhhcccccccceeeeeeeeeccceeEEEecCCccEEEe
Confidence 1345677788888999999999999986544
No 2
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15 E-value=3.6e-07 Score=82.55 Aligned_cols=93 Identities=17% Similarity=0.091 Sum_probs=60.7
Q ss_pred CCCceEEEecC-------CeeEEeeecccccccCCCChHHHHHHHHHH-HHHHHHhc-cCCC---CCHHHHHHHHHhCC-
Q 018599 216 GGEDAHFICGD-------EQVIGVADGVGGWADVGVDAGEFARELMSH-SFRAVQEE-STHA---IDPARVLEKAHSST- 282 (353)
Q Consensus 216 gGEDA~FIs~~-------~~aiGVADGVGGWa~~GVDPglFSReLM~~-c~~~i~ee-~~~~---idP~~LL~~Ay~~t- 282 (353)
.=||+|.+..+ ...+||+||.||+. .+.|+...+.. ..+..... .... .+..+.|.++|.++
T Consensus 34 ~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~-----~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~al~~a~~~~~ 108 (295)
T d1a6qa2 34 EMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQ-----VAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEID 108 (295)
T ss_dssp SCCEEEEEEEEETTTEEEEEEEEEEEEESCSH-----HHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHHHHHHHHHH
T ss_pred cccCeeEEEcccCCCCCceEEEEEEeCCCChH-----HHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHHHH
Confidence 45999987542 24799999999875 57776654433 32212111 1111 13445666666433
Q ss_pred ------------CCCCCceEEEEEEecCceEEEEeeccCceee
Q 018599 283 ------------KAKGSSTACIIALTSKVFCFYISLASHAHYF 313 (353)
Q Consensus 283 ------------~~~GSSTACVa~L~~~gL~vaNlGDS~~~~f 313 (353)
...++|||+++.+.++.+.++|+|||-..++
T Consensus 109 ~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~ 151 (295)
T d1a6qa2 109 EHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLC 151 (295)
T ss_dssp HHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEE
T ss_pred HHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEe
Confidence 2357899999999999999999999976554
No 3
>d1yqsa1 e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., R61 [TaxId: 1931]}
Probab=10.40 E-value=80 Score=26.42 Aligned_cols=46 Identities=7% Similarity=-0.055 Sum_probs=23.7
Q ss_pred CCceEEEEEEecCceEEEEeeccCceeeccCCCCCchhhccCChhH
Q 018599 286 GSSTACIIALTSKVFCFYISLASHAHYFQSSTVMTKYFWLLLPRKH 331 (353)
Q Consensus 286 GSSTACVa~L~~~gL~vaNlGDS~~~~fQtH~FNTPyQLs~iP~~~ 331 (353)
|-.-+.|++.+++.+....-|-....--+.-.-+|.|+++.|-+-+
T Consensus 20 ~~pG~~v~v~~~g~~~~~~~G~~d~~~~~~~t~~t~f~i~SvsK~~ 65 (345)
T d1yqsa1 20 GAPGAMVRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSF 65 (345)
T ss_dssp TCSEEEEEEEETTEEEEEEEEBSCTTTCCBCCTTCBEECGGGHHHH
T ss_pred CCCeEEEEEEECCEEEEEeEEEEeccCCCCCCCCCEEEchhhhHHH
Confidence 4344566666666655444453322222223446777776665554
No 4
>d2qalg1 a.75.1.1 (G:2-151) Ribosomal protein S7 {Escherichia coli [TaxId: 562]}
Probab=8.74 E-value=1.4e+02 Score=23.40 Aligned_cols=41 Identities=15% Similarity=0.219 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhccCCCCCHHHHHHHHHhCCC--------CCCCceEEE
Q 018599 250 ARELMSHSFRAVQEESTHAIDPARVLEKAHSSTK--------AKGSSTACI 292 (353)
Q Consensus 250 SReLM~~c~~~i~ee~~~~idP~~LL~~Ay~~t~--------~~GSSTACV 292 (353)
++.++..+.+.+.+. ...||.++|.+|.+++. ..||+|--|
T Consensus 37 A~~iv~~al~~i~~~--t~~~pi~vl~~AI~nv~P~~ev~~~r~gG~~yqv 85 (150)
T d2qalg1 37 AESIVYSALETLAQR--SGKSELEAFEVALENVRPTVEVKSRRVGGSTYQV 85 (150)
T ss_dssp HHHHHHHHHHHHHHH--HCSCHHHHHHHHHHHSCCSEEEEEEECSSSEEEE
T ss_pred HHHHHHHHHHHHHHh--cCCCcchHHHHHHHHhccceeEEeeeecccccee
Confidence 556666666666543 25699999999998763 357776655
No 5
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}
Probab=7.10 E-value=2.6e+02 Score=20.97 Aligned_cols=39 Identities=13% Similarity=0.055 Sum_probs=20.2
Q ss_pred HHHHHHHhCCCCCCCceEEEEEEecC-ceEEEEeeccCce
Q 018599 273 RVLEKAHSSTKAKGSSTACIIALTSK-VFCFYISLASHAH 311 (353)
Q Consensus 273 ~LL~~Ay~~t~~~GSSTACVa~L~~~-gL~vaNlGDS~~~ 311 (353)
.||.+|..-+...|....+-+.+... +...+.+-|.|..
T Consensus 56 NLi~NAik~t~~~~~~~~i~i~~~~~~~~~~i~V~D~G~G 95 (161)
T d2c2aa2 56 NLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIG 95 (161)
T ss_dssp HHHHHHHHTCCTTCTTCEEEEEEEEETTEEEEEEEECSSC
T ss_pred HHHHHHHHhhhcCCCcceeeEEEEecCCEEEEEEEEcCCC
Confidence 45667777666544444444444432 3334555666643
No 6
>d1y0na_ d.291.1.1 (A:) Hypothetical UPF0270 protein PA3463 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=6.57 E-value=1.1e+02 Score=22.20 Aligned_cols=20 Identities=20% Similarity=0.291 Sum_probs=17.6
Q ss_pred CchhhccCChhHHhhhhhhHHh
Q 018599 320 TKYFWLLLPRKHISNFFPTFFK 341 (353)
Q Consensus 320 TPyQLs~iP~~~~~~~~~~~~~ 341 (353)
.||| .+|++.+.|++-+|+-
T Consensus 5 IP~~--~L~~etL~~lIeeFv~ 24 (78)
T d1y0na_ 5 IPHD--LLEADTLNNLLEDFVT 24 (78)
T ss_dssp CCGG--GSCHHHHHHHHHHHHH
T ss_pred cchH--hCCHHHHHHHHHHHHh
Confidence 5888 7999999999999973
No 7
>d1m5sa2 d.58.33.1 (A:146-297) Formylmethanofuran:tetrahydromethanopterin formyltransferase {Archaeon Methanosarcina barkeri [TaxId: 2208]}
Probab=6.15 E-value=1.1e+02 Score=24.81 Aligned_cols=21 Identities=24% Similarity=0.480 Sum_probs=16.6
Q ss_pred ceEEEecCCeeEEeeeccccccc
Q 018599 219 DAHFICGDEQVIGVADGVGGWAD 241 (353)
Q Consensus 219 DA~FIs~~~~aiGVADGVGGWa~ 241 (353)
|--|+++ ..+|+.+||||-.-
T Consensus 1 dGEFl~E--e~~g~~~gVgGGNf 21 (152)
T d1m5sa2 1 EGDFLAE--ENIGAIAGIAGGNF 21 (152)
T ss_dssp TEEEEEE--SCEEEEEEEEEEEE
T ss_pred CCceEEE--eeccccceeecceE
Confidence 3447877 68999999999765
No 8
>d1husa_ a.75.1.1 (A:) Ribosomal protein S7 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=6.06 E-value=1.8e+02 Score=22.42 Aligned_cols=41 Identities=22% Similarity=0.404 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhccCCCCCHHHHHHHHHhCCC--------CCCCceEEE
Q 018599 250 ARELMSHSFRAVQEESTHAIDPARVLEKAHSSTK--------AKGSSTACI 292 (353)
Q Consensus 250 SReLM~~c~~~i~ee~~~~idP~~LL~~Ay~~t~--------~~GSSTACV 292 (353)
++.++..+...+.+. ...||.++|.+|-+++. ..|+.|--|
T Consensus 30 A~kiv~~al~~i~~~--~~~~pi~vl~~Ai~n~~P~~ev~~~r~GG~~yqv 78 (139)
T d1husa_ 30 AQKILYTAFDIIRER--TGKDPMEVFEQALKNVMPVLEVRARRVGGANYQV 78 (139)
T ss_dssp HHHHHHHHHHHHHHH--HCSCHHHHHHHHHHHHCCSEEEECCEETTEECCE
T ss_pred HHHHHHHHHHHHHHh--cCCCcchHHHHHHHhhhhhhheeeeeeCccceEe
Confidence 455566666666543 24699999999998652 356665544
No 9
>d1jt6a2 a.121.1.1 (A:73-187) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=5.85 E-value=1.3e+02 Score=22.33 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=27.1
Q ss_pred EeeecccccccCCCChHHHHHHHHHHHHHHHHhcc-CCCCCHHHHHHHH
Q 018599 231 GVADGVGGWADVGVDAGEFARELMSHSFRAVQEES-THAIDPARVLEKA 278 (353)
Q Consensus 231 GVADGVGGWa~~GVDPglFSReLM~~c~~~i~ee~-~~~idP~~LL~~A 278 (353)
||++|+ ++. .||..-++.|+..+.-...+.. .+..++.+|.++.
T Consensus 62 Gi~~G~--f~~--~d~~~~~~~il~~lng~~~Wy~~~g~~~~~~la~~~ 106 (115)
T d1jt6a2 62 GNLNGE--WSI--NDVNAVSKIAANAVNGIVTFTHEQNINERIKLMNKF 106 (115)
T ss_dssp HHTTTS--CCC--SCHHHHHHHHHHHHHHHHHSCTTSCHHHHHHHHHHH
T ss_pred HHHCCc--eec--cCHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHH
Confidence 455544 333 3899999988888777666643 2344555555543
No 10
>d2o3la1 a.69.4.1 (A:14-95) Hypothetical protein BCE3448 {Bacillus cereus [TaxId: 1396]}
Probab=5.62 E-value=1.7e+02 Score=21.00 Aligned_cols=28 Identities=29% Similarity=0.348 Sum_probs=19.8
Q ss_pred eeecccccccCCCChHHHHHHHHHHHHH
Q 018599 232 VADGVGGWADVGVDAGEFARELMSHSFR 259 (353)
Q Consensus 232 VADGVGGWa~~GVDPglFSReLM~~c~~ 259 (353)
.+||-.-=.--|-||..|..+|+.+...
T Consensus 53 ~~~G~~v~ev~G~D~~~f~deli~~~k~ 80 (82)
T d2o3la1 53 AAEGRQVLDITGEDVASFADELVANAKT 80 (82)
T ss_dssp HHHTCCHHHHHCSCHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHhCCCHHHHHHHHHHhccc
Confidence 3455443333499999999999987654
Done!