Citrus Sinensis ID: 018600

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350---
Protein Sequence
MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVMLVYSSGAIEITLAVPLR
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEcccccccccccccccccEEccccccccccEEEEcccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHccccccEEEEcHHHHHHHHccccccEEEEEHHccccHHHHHHHHHHcccEEEcccHHHHccHHHHHHHHHHcccEEEcccccHHHHHHHccccccccccEEEEEEcccccccccHHHHHcccHHHHHccccccccccccccccccccHHHHHHHHHHccccccccEEEEEcccccccccccccccccccccccccccEEEEEcccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHEcEEEEEcccccccccccccccEEEEEcccccEEccEEEEEcccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHccccccEEEEEEEccccHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHccccccccEEcHHHHHHHHccccccEEEEccccHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHccEEEEccHHHHHHHHcccccHHHcEEEEEEEEcccccccccHHHHccccHHHHccccccccccHHHHHHHHcHHHHHHHHHHHHHHcccHHHEEEEEcccccEEEEEEEcEEEccEEEEEEccccHHHHcccccc
Coil and Loop (DISEMBL)
malnlqipAEIKALSFLETtrsnhrlpklsggfplkrkdnatatfgrivqcsaqgpppawpgravtetfrktwdgpkpisvlgstgsigtqTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANveekpeilagEQGVieaarhpdavTVVTGIVGCAGLKPTVAAIEAGKDIALANKEtliaggpfvlplahkhnikilpadsehSAIFQCIQGLPEGALRRIILTAsggafrdwpveklKEVKVADalkhpnwsmgkkitvDSATLFNKGLEVIEAHYLfgaeydnieiiihpqSIIHSMVETQVLLYPVVMLVYSSGAIEITLAVPLR
Flexible Loop (DISEMBL)
MALNLQIPAEIKALSFlettrsnhrlpklsggfplkRKDNATATFGRIvqcsaqgpppawpgRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNItlladqvkrfkpQVVAVRNESLLDEIKEALanveekpeiLAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASggafrdwpvEKLKEVKVAdalkhpnwsmgkkITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVMLVYSSGAIEITLAVPLR
Low Complexity Region (SEG)
MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNieiiihpqsiihsMVETQVLLYPVVMLVYSSGAIEITLAVPLR
Disordered region (IsUnstruct)
************ALSF************************ATATFGRIVQCSAQG**PAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVMLVYSSGAIEITLAV***
Disordered Region (DISOPRED)
********AEIKALSFLETTR******KLSGGFPLKRK***************************************PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVMLVYSSGAIEITLAVP**
Disordered Region (DISEMBL)
MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVMLVYSSGAIEITLAVPLR
Disordered Region (DISPRO)
**LNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVMLVYSSGAIEITLAVPL*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVxxxxxxxxxxxxxxxxxxxxxPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVMLVYSSGAIEITLAVPLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	353	2.2.26 [Sep-21-2011]
Q9XFS9	477	1-deoxy-D-xylulose 5-phos	yes	no	0.923	0.683	0.807	1e-151
Q9XES0	470	1-deoxy-D-xylulose 5-phos	N/A	no	0.906	0.680	0.812	1e-150
Q8W250	473	1-deoxy-D-xylulose 5-phos	yes	no	0.926	0.691	0.781	1e-148
B0CD21	401	1-deoxy-D-xylulose 5-phos	yes	no	0.713	0.628	0.730	1e-109
B1WNP5	398	1-deoxy-D-xylulose 5-phos	yes	no	0.713	0.633	0.738	1e-107
B0JWW6	390	1-deoxy-D-xylulose 5-phos	yes	no	0.713	0.646	0.714	1e-105
B7K5G6	398	1-deoxy-D-xylulose 5-phos	yes	no	0.713	0.633	0.718	1e-105
B2ITX3	398	1-deoxy-D-xylulose 5-phos	yes	no	0.713	0.633	0.702	1e-103
Q3MDL2	398	1-deoxy-D-xylulose 5-phos	yes	no	0.713	0.633	0.698	1e-103
B8HVK1	387	1-deoxy-D-xylulose 5-phos	yes	no	0.713	0.651	0.702	1e-103

>sp|Q9XFS9|DXR_ARATH 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2

 Score =  535 bits (1377), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/333 (80%), Positives = 302/333 (90%), Gaps = 7/333 (2%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQ-----G 55
           M LN   PAE KA+SFL+T+R N  +PKLSGGF L+R++     FG+ V+CS +      
Sbjct: 2   MTLNSLSPAESKAISFLDTSRFNP-IPKLSGGFSLRRRNQGRG-FGKGVKCSVKVQQQQQ 59

Query: 56  PPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT 115
           PPPAWPGRAV E  R++WDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+T
Sbjct: 60  PPPAWPGRAVPEAPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVT 119

Query: 116 LLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTG 175
           LLADQV+RFKP +VAVRNESL++E+KEALA+++ K EI+ GEQGVIE ARHP+AVTVVTG
Sbjct: 120 LLADQVRRFKPALVAVRNESLINELKEALADLDYKLEIIPGEQGVIEVARHPEAVTVVTG 179

Query: 176 IVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 235
           IVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA+KHN+KILPADSEHSAIFQCI
Sbjct: 180 IVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLANKHNVKILPADSEHSAIFQCI 239

Query: 236 QGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGL 295
           QGLPEGALR+IILTASGGAFRDWPVEKLKEVKVADALKHPNW+MGKKITVDSATLFNKGL
Sbjct: 240 QGLPEGALRKIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGL 299

Query: 296 EVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           EVIEAHYLFGAEYD+IEI+IHPQSIIHSM+ETQ
Sbjct: 300 EVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQ 332

Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP). Required for chloroplast development.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 6EC: 7

>sp|Q9XES0|DXR_MENPI 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2

 Score =  532 bits (1371), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 264/325 (81%), Positives = 290/325 (89%), Gaps = 5/325 (1%)

Query: 8   PAEIKALSFLETTRSNHRLP--KLSGGFPLKRKDNATATFGRIVQCSAQG--PPPAWPGR 63
           P EIK LSFL++++SN+ L   K  GGF  KRKD+   T  + V CSAQ   PPPAWPGR
Sbjct: 3   PTEIKTLSFLDSSKSNYNLNPLKFQGGFAFKRKDSG-CTAAKRVHCSAQSQSPPPAWPGR 61

Query: 64  AVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR 123
           A  E  R TW+GPKPISV+GSTGSIGTQTLDIVAE+ DKFR+VALAAGSN+TLLADQVK 
Sbjct: 62  AFPEPGRMTWEGPKPISVIGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQVKA 121

Query: 124 FKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLK 183
           FKP++V+V++ESL+ E+KEALA  E+ PEI+ GEQG+IE ARHPDAVTVVTGIVGCAGLK
Sbjct: 122 FKPKLVSVKDESLISELKEALAGFEDMPEIIPGEQGMIEVARHPDAVTVVTGIVGCAGLK 181

Query: 184 PTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGAL 243
           PTVAAIEAGKDIALANKETLIAGGPFVLPLA KHN+KILPADSEHSAIFQCIQGLPEGAL
Sbjct: 182 PTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKILPADSEHSAIFQCIQGLPEGAL 241

Query: 244 RRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYL 303
           RRIILTASGGAFRD PVEKLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIEAHYL
Sbjct: 242 RRIILTASGGAFRDLPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL 301

Query: 304 FGAEYDNIEIIIHPQSIIHSMVETQ 328
           FGAEYD+IEI+IHPQSIIHSMVETQ
Sbjct: 302 FGAEYDDIEIVIHPQSIIHSMVETQ 326

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|Q8W250|DXR_ORYSJ 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2

 Score =  525 bits (1351), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 257/329 (78%), Positives = 286/329 (86%), Gaps = 2/329 (0%)

Query: 1   MALNL-QIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPA 59
           MAL +   P ++ A+SFL++ R      +L    P + +D    +  R      Q PPPA
Sbjct: 1   MALKVVSFPGDLAAVSFLDSNRGGA-FNQLKVDLPFQTRDRRAVSLRRTCCSMQQAPPPA 59

Query: 60  WPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD 119
           WPGRAV E  R++WDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLAD
Sbjct: 60  WPGRAVVEPGRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLAD 119

Query: 120 QVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGC 179
           QVK FKP++VAVRNESL+DE+KEALA+ + KPEI+ GEQGVIE ARHPDAVTVVTGIVGC
Sbjct: 120 QVKTFKPKLVAVRNESLVDELKEALADCDWKPEIIPGEQGVIEVARHPDAVTVVTGIVGC 179

Query: 180 AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLP 239
           AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA KH +KILPADSEHSAIFQCIQGLP
Sbjct: 180 AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHKVKILPADSEHSAIFQCIQGLP 239

Query: 240 EGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE 299
           EGALRRIILTASGGAFRDWPV+KLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIE
Sbjct: 240 EGALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIE 299

Query: 300 AHYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           AHYLFGAEYD+IEI+IHPQSIIHSM+ETQ
Sbjct: 300 AHYLFGAEYDDIEIVIHPQSIIHSMIETQ 328

Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP). Required for chloroplast development.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B0CD21|DXR_ACAM1 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acaryochloris marina (strain MBIC 11017) GN=dxr PE=3 SV=1

 Score =  394 bits (1012), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/252 (73%), Positives = 225/252 (89%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I++LGSTGSIGTQTLDIVA++ D+FR+V +AAG NI LL+ Q+++F+P++VA+ + + 
Sbjct: 2   KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGMAAGRNIELLSQQIRQFRPEIVAIADPNQ 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L ++K+A+A+V+ +P++LAGE GV+E A + DA +VVTGIVGCAGL PT+AAI+AGKDIA
Sbjct: 62  LSDLKDAIADVDPQPQLLAGEAGVVEVAAYGDAESVVTGIVGCAGLLPTIAAIKAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+PEG LRRIILTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPEGGLRRIILTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DWPVEKL EV VADALKHPNWSMGKKITVDSATL NKGLEVIEAHYLFG +YD+I+I+IH
Sbjct: 182 DWPVEKLPEVTVADALKHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGVDYDHIDIVIH 241

Query: 317 PQSIIHSMVETQ 328
           PQSIIHS++E Q
Sbjct: 242 PQSIIHSLIELQ 253

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Acaryochloris marina (strain MBIC 11017) (taxid: 329726)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B1WNP5|DXR_CYAA5 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain ATCC 51142) GN=dxr PE=3 SV=1

 Score =  389 bits (998), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/252 (73%), Positives = 221/252 (87%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K IS+LGSTGSIGTQTLDIV ++ D+F+VV LA  SN+ LLA QV++F+P++VA+ +ES 
Sbjct: 2   KKISLLGSTGSIGTQTLDIVNQYPDQFQVVGLATRSNVELLATQVQQFRPEIVAICDESK 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L  +K+A+A+++  P ILAGEQGV E ARH DA +VVTGIVGCAGL PT+AAIEAGKDIA
Sbjct: 62  LGSLKDAIASMDYSPLILAGEQGVAEVARHGDAESVVTGIVGCAGLLPTIAAIEAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+P+G LRRIILTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLIEKHGVKLLPADSEHSAIFQCLQGVPDGGLRRIILTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DWPVE+LK V V DALKHPNWSMG+KITVDSATL NKGLEVIEAH+LFG +Y+NI+I+IH
Sbjct: 182 DWPVEQLKYVTVQDALKHPNWSMGQKITVDSATLMNKGLEVIEAHFLFGMDYENIDIVIH 241

Query: 317 PQSIIHSMVETQ 328
           PQSIIHS++E Q
Sbjct: 242 PQSIIHSLIEVQ 253

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Cyanothece sp. (strain ATCC 51142) (taxid: 43989)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B0JWW6|DXR_MICAN 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Microcystis aeruginosa (strain NIES-843) GN=dxr PE=3 SV=1

 Score =  382 bits (982), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 180/252 (71%), Positives = 221/252 (87%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K IS+LGSTGSIGTQTLDIV +H DKF+VV LA G+NI LL++Q+++F+PQ+VA+ NES 
Sbjct: 2   KKISILGSTGSIGTQTLDIVTDHPDKFQVVGLATGNNIQLLSEQIRQFRPQIVAINNESQ 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L+++K  +++++  P ILAG++GVIE AR+ D+ +VVTGIVGCAGL PT+AAI AGKDIA
Sbjct: 62  LEDLKSLISDLDYTPIILAGKEGVIEVARYGDSESVVTGIVGCAGLLPTIAAITAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+P G L++IILTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLVEKHRVKLLPADSEHSAIFQCLQGVPTGGLKKIILTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           D PVEKL +V VADALKHPNWSMG+KIT+DSATL NKGLEVIEAHYLFG +Y+ I+I+IH
Sbjct: 182 DLPVEKLPQVTVADALKHPNWSMGRKITIDSATLMNKGLEVIEAHYLFGVDYNAIDIVIH 241

Query: 317 PQSIIHSMVETQ 328
           PQSIIHS++E Q
Sbjct: 242 PQSIIHSLIELQ 253

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Microcystis aeruginosa (strain NIES-843) (taxid: 449447)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B7K5G6|DXR_CYAP8 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 8801) GN=dxr PE=3 SV=1

 Score =  380 bits (976), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/252 (71%), Positives = 218/252 (86%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I++LGSTGSIGTQTLDIV ++ D+F+VV LA  +N  LLA Q+K+F+P++VA+  ES 
Sbjct: 2   KKITILGSTGSIGTQTLDIVQQYPDQFQVVGLATRNNGELLAQQIKQFRPEIVAICQESQ 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L+ IK+A+A+++  P +L GE GV+E AR+ D+ +VVTGIVGCAGL PT+AAIEAGKDIA
Sbjct: 62  LNTIKDAIASLDYSPILLTGEAGVVEVARYGDSESVVTGIVGCAGLLPTIAAIEAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+P+G LRRIILTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLRRIILTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DWPVE+LK V V DA+KHPNWSMG+KITVDSATL NKGLEVIEAHYLFG EYD I+I+IH
Sbjct: 182 DWPVEQLKFVTVEDAIKHPNWSMGRKITVDSATLMNKGLEVIEAHYLFGLEYDKIDIVIH 241

Query: 317 PQSIIHSMVETQ 328
           PQSIIHS++E Q
Sbjct: 242 PQSIIHSLIELQ 253

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Cyanothece sp. (strain PCC 8801) (taxid: 41431)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B2ITX3|DXR_NOSP7 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxr PE=3 SV=1

 Score =  376 bits (965), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/252 (70%), Positives = 219/252 (86%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I+++GSTGSIGTQTLDIV ++ D+FR+V LAAG+N+ +LA Q+++F+P++ A+ +E  
Sbjct: 2   KAITLVGSTGSIGTQTLDIVTQYPDQFRIVGLAAGNNVEMLAAQIRQFRPKIAAICSEDK 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L  +KEA+ +++ +P +LAGE GVIE AR+ DA TVVTGIVGCAGL PT+AAIEAGKDIA
Sbjct: 62  LPALKEAIIDLDPQPILLAGEAGVIEVARYGDAQTVVTGIVGCAGLLPTIAAIEAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAG P VLPL  KH +K+LPADSEHSAIFQC+QG+P+  LR+I+LTASGGAFR
Sbjct: 122 LANKETLIAGAPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKSGLRKILLTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DW VE+L +V VADALKHPNWSMG+KITVDSATL NKGLEVIEAH+LFG +YDNIEI+IH
Sbjct: 182 DWDVERLADVTVADALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYDNIEIVIH 241

Query: 317 PQSIIHSMVETQ 328
           PQSIIHS++E Q
Sbjct: 242 PQSIIHSLIELQ 253

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (taxid: 63737)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|Q3MDL2|DXR_ANAVT 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxr PE=3 SV=1

 Score =  375 bits (963), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/252 (69%), Positives = 218/252 (86%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I+++GSTGSIGTQTLDIV+++ D+FR+V LAAGSN+ +LA+Q+++F+PQ+ A+     
Sbjct: 2   KSITLVGSTGSIGTQTLDIVSQYPDQFRIVGLAAGSNVEMLAEQIRQFRPQIAAISAAEK 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L  ++ A+ +++ +P +L GE GVIE AR+ DA TVVTGIVGCAGL PT+AAIEAGKDIA
Sbjct: 62  LPALQAAIKDLDPQPILLGGEAGVIEVARYGDAETVVTGIVGCAGLLPTIAAIEAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  KH +K+LPADSEHSAIFQC+QG+P+G LR+I+LTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLRKILLTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DW VE+L EV VADALKHPNWSMG+KITVDSATL NKGLEVIEAH+LFG +Y +IEI+IH
Sbjct: 182 DWDVERLAEVTVADALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYQDIEIVIH 241

Query: 317 PQSIIHSMVETQ 328
           PQSIIHS++E Q
Sbjct: 242 PQSIIHSLIELQ 253

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Anabaena variabilis (strain ATCC 29413 / PCC 7937) (taxid: 240292)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

>sp|B8HVK1|DXR_CYAP4 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxr PE=3 SV=1

 Score =  375 bits (962), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/252 (70%), Positives = 219/252 (86%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I++LGSTGSIGTQTLDIVA++ D+FR+V LAAG ++  L  Q+++F+PQ+VA+ +E  
Sbjct: 2   KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGLAAGRSLDKLIPQIRQFRPQIVALADEQQ 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           LD++K A+A+++ +P ++AG  GV E A + DA TVVTGIVGCAGL PT+AAI+AGKDIA
Sbjct: 62  LDDLKAAIADLDPQPILVAGPAGVCEVAAYGDAKTVVTGIVGCAGLLPTIAAIKAGKDIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKETLIAGGP VLPL  ++ +K+LPADSEHSAIFQC+QG+P G LRRI+LTASGGAFR
Sbjct: 122 LANKETLIAGGPVVLPLVEQYGVKLLPADSEHSAIFQCLQGVPAGGLRRILLTASGGAFR 181

Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIH 316
           DWPV+KL +V +ADALKHPNWSMG+KITVDSATL NKGLEVIEAHYLFG +YD+IEIIIH
Sbjct: 182 DWPVDKLGQVTIADALKHPNWSMGQKITVDSATLMNKGLEVIEAHYLFGLDYDHIEIIIH 241

Query: 317 PQSIIHSMVETQ 328
           PQSIIHS++E Q
Sbjct: 242 PQSIIHSLIEVQ 253

Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).

Cyanothece sp. (strain PCC 7425 / ATCC 29141) (taxid: 395961)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 6

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
91241600	471	1-deoxy-D-xylulose 5-phosphate reductois	0.923	0.692	0.859	1e-161
225457034	471	PREDICTED: 1-deoxy-D-xylulose 5-phosphat	0.923	0.692	0.859	1e-160
255540669	467	1-deoxy-D-xylulose 5-phosphate reductois	0.912	0.689	0.844	1e-160
224119346	471	predicted protein [Populus trichocarpa]	0.915	0.685	0.839	1e-159
164604988	471	1-deoxy-D-xylulose-5-phosphate reductois	0.923	0.692	0.850	1e-159
46410854	471	putative 1-deoxy-D-xylulose 5-phosphate	0.923	0.692	0.844	1e-158
224133538	471	predicted protein [Populus trichocarpa]	0.915	0.685	0.842	1e-158
51490971	472	1-deoxy-D-xylulose-5-phosphate reductois	0.915	0.684	0.831	1e-157
149944267	474	1-deoxy-D-xylulose 5-phosphate reductois	0.926	0.689	0.827	1e-157
133753347	467	1-deoxy-D-xylulose 5-phosphate reductois	0.912	0.689	0.826	1e-155

>gi|91241600|gb|ABD92702.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis] gi|94421688|gb|ABF18928.1| putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis]

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 282/328 (85%), Positives = 306/328 (93%), Gaps = 2/328 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           MALNL  PAEIKA+SFL++T+S+H L KL GGF LKRKD   A FG+ VQCSAQ PPPAW
Sbjct: 1   MALNLLSPAEIKAISFLDSTKSSH-LTKLPGGFSLKRKDFGAA-FGKKVQCSAQPPPPAW 58

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
           PGRA  +  RKTWDGPKPISV+GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQ
Sbjct: 59  PGRAFPDLGRKTWDGPKPISVVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQ 118

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+VAVRNESL+ E++EALA+VEEKPEI+ GEQGV+E ARHPDAV+VVTGIVGCA
Sbjct: 119 VKTFKPQLVAVRNESLVHELREALADVEEKPEIIPGEQGVVEVARHPDAVSVVTGIVGCA 178

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSAIFQCIQGLP+
Sbjct: 179 GLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPD 238

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRIILTASGGAFRDWPV+KLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 239 GALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 298

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           HYLFGAEYDNIEI+IHPQSIIHSMVETQ
Sbjct: 299 HYLFGAEYDNIEIVIHPQSIIHSMVETQ 326

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457034|ref|XP_002282761.1| PREDICTED: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic [Vitis vinifera] gi|297733784|emb|CBI15031.3| unnamed protein product [Vitis vinifera]

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 282/328 (85%), Positives = 305/328 (92%), Gaps = 2/328 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           MALNL  PAEIK +SFL++T+S  RLPKL GGF LKRKD   ATFGR V CSAQ PPPAW
Sbjct: 1   MALNLLPPAEIKLISFLDSTKST-RLPKLPGGFVLKRKDYG-ATFGRRVNCSAQPPPPAW 58

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
           PGRAV E  RKTWDGPKP+SV+GSTGSIGTQTLDIVAE+ DKFR+VALAAGSN+TLLADQ
Sbjct: 59  PGRAVPELGRKTWDGPKPLSVVGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQ 118

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+VAVRNE+L++E+KEALA+ E KPEI+ GEQGVIE ARHP+AVTVVTGIVGCA
Sbjct: 119 VKTFKPQLVAVRNEALVNELKEALADCEHKPEIIPGEQGVIEVARHPEAVTVVTGIVGCA 178

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHN+KILPADSEHSAIFQCIQGLPE
Sbjct: 179 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPE 238

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRI+LTASGGAFRDWPV+KLKE KV+DALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 239 GALRRILLTASGGAFRDWPVDKLKEAKVSDALKHPNWNMGKKITVDSATLFNKGLEVIEA 298

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           HYLFGAEYD+IEIIIHPQSIIHSMVETQ
Sbjct: 299 HYLFGAEYDDIEIIIHPQSIIHSMVETQ 326

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540669|ref|XP_002511399.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative [Ricinus communis] gi|223550514|gb|EEF52001.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative [Ricinus communis]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/328 (84%), Positives = 307/328 (93%), Gaps = 6/328 (1%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           MALNL  PAE+K++SFL++TRS+ +LPKL G F LKRK+     FGR VQCSAQ PPPAW
Sbjct: 1   MALNLLSPAELKSVSFLDSTRSS-QLPKLPGSFSLKRKE-----FGRKVQCSAQAPPPAW 54

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
           PGRAV E  RKTWDGPKPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQ
Sbjct: 55  PGRAVAEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQ 114

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+V+VR+ESL+DE+KEALA+V+EKPEI+ GEQG++E ARHPDAV+VVTGIVGCA
Sbjct: 115 VKTFKPQLVSVRDESLVDELKEALADVDEKPEIIPGEQGIVEVARHPDAVSVVTGIVGCA 174

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSAIFQCIQGLPE
Sbjct: 175 GLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPE 234

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRIILTASGGAFRDWPVEKLK+VKVADALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 235 GALRRIILTASGGAFRDWPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 294

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           HYLFGA+YDNIEI+IHPQSIIHSMVET+
Sbjct: 295 HYLFGADYDNIEIVIHPQSIIHSMVETE 322

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119346|ref|XP_002318048.1| predicted protein [Populus trichocarpa] gi|222858721|gb|EEE96268.1| predicted protein [Populus trichocarpa]

 Score =  567 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 278/331 (83%), Positives = 304/331 (91%), Gaps = 8/331 (2%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQG---PP 57
           MALN+  PAEIKA+SFL++T+SN RLPKL GG  LKRKD      GR +QCS Q    PP
Sbjct: 1   MALNILSPAEIKAISFLDSTKSN-RLPKLQGGLSLKRKDCG----GRRIQCSVQNQNQPP 55

Query: 58  PAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL 117
           PAWPGRA  E  RKTWDGPKPIS++GSTGSIGTQTLDIVAE+ DKF+VVALAAGSN+TLL
Sbjct: 56  PAWPGRACPEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLL 115

Query: 118 ADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIV 177
           ADQV+ FKPQ++AVRNESL+DEIKEALA+VEEKPEI+ GEQGV+E ARHPDAV+VVTGIV
Sbjct: 116 ADQVRTFKPQLIAVRNESLVDEIKEALADVEEKPEIIPGEQGVVEVARHPDAVSVVTGIV 175

Query: 178 GCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 237
           GCAGLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSAIFQCIQG
Sbjct: 176 GCAGLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQG 235

Query: 238 LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 297
           LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEV
Sbjct: 236 LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEV 295

Query: 298 IEAHYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           IEAHYLFGA+YDNI+I+IHPQSIIHSM+ETQ
Sbjct: 296 IEAHYLFGADYDNIDIVIHPQSIIHSMIETQ 326

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164604988|dbj|BAF98290.1| 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Hevea brasiliensis]

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 279/328 (85%), Positives = 303/328 (92%), Gaps = 2/328 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           MALNL  PAEIKA+SFL++T+S+H L KL G F L RKD   A FG+ VQCSAQ PPPAW
Sbjct: 1   MALNLLSPAEIKAISFLDSTKSSH-LTKLPGSFSLNRKDFGAA-FGKKVQCSAQPPPPAW 58

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
            GRA  +  RKTWDGPKPISV+GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLADQ
Sbjct: 59  TGRAFPDLGRKTWDGPKPISVVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQ 118

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+VAVRNESL+ E++EALA+VEEKPEI+ GEQGV+E ARHPDAV+VVTGIVGCA
Sbjct: 119 VKTFKPQLVAVRNESLVHELREALADVEEKPEIIPGEQGVVEVARHPDAVSVVTGIVGCA 178

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSAIFQCIQGLP+
Sbjct: 179 GLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPD 238

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRIILTASGGAFRDWPV+KLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 239 GALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 298

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           HYLFGAEYDNIEI+IHPQSIIHSMVETQ
Sbjct: 299 HYLFGAEYDNIEIVIHPQSIIHSMVETQ 326

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|46410854|gb|AAS94121.1| putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Hevea brasiliensis]

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/328 (84%), Positives = 302/328 (92%), Gaps = 2/328 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW 60
           M LNL  PAEIKA+SFL++T+SNH LPK  G   LKRKD   A FGR VQCSAQ PPPAW
Sbjct: 1   MELNLLSPAEIKAISFLDSTKSNH-LPKFPGVISLKRKDFGAA-FGRKVQCSAQPPPPAW 58

Query: 61  PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ 120
           PGRA  E  RKTWDGPKPISV+GSTGSIGTQTLDIVAE+  KFRVVALAAGSN+TLLADQ
Sbjct: 59  PGRAFPEPGRKTWDGPKPISVVGSTGSIGTQTLDIVAENPGKFRVVALAAGSNVTLLADQ 118

Query: 121 VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA 180
           VK FKPQ+VAVRNESL DE+K+ALA++EEKPEI+ GE+GV+E ARHPDAV+VVTGIVGCA
Sbjct: 119 VKTFKPQLVAVRNESLADELKDALADLEEKPEIIPGEEGVVEVARHPDAVSVVTGIVGCA 178

Query: 181 GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE 240
           GLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSA+FQCIQGLP+
Sbjct: 179 GLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAVFQCIQGLPD 238

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
           GALRRIILTASGGAFRDWPV++LKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVIEA
Sbjct: 239 GALRRIILTASGGAFRDWPVDRLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEA 298

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           HYLFGA+YDNIEI+IHPQSIIHSMVETQ
Sbjct: 299 HYLFGADYDNIEIVIHPQSIIHSMVETQ 326

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133538|ref|XP_002321599.1| predicted protein [Populus trichocarpa] gi|222868595|gb|EEF05726.1| predicted protein [Populus trichocarpa]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 279/331 (84%), Positives = 301/331 (90%), Gaps = 8/331 (2%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQG---PP 57
           MALN   PAEIKA+SFL++T+SNH +PKL G   LKRKD      GR +QCS Q    PP
Sbjct: 1   MALNFLSPAEIKAISFLDSTKSNH-IPKLPGRLGLKRKD----CRGRRIQCSVQNQNQPP 55

Query: 58  PAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL 117
           PAWPGRA  E  RKTWDGPKPIS++GSTGSIGTQTLDIV E+ DKF VVALAAGSN+TLL
Sbjct: 56  PAWPGRAFPEPGRKTWDGPKPISIVGSTGSIGTQTLDIVTENPDKFTVVALAAGSNVTLL 115

Query: 118 ADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIV 177
           ADQV+RFKPQ+VAVRNESL+DE+KEALA+VEEKPEI+ GEQGVIE ARHPDAV+VVTGIV
Sbjct: 116 ADQVRRFKPQLVAVRNESLVDELKEALADVEEKPEIIPGEQGVIEVARHPDAVSVVTGIV 175

Query: 178 GCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 237
           GCAGLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHKHN+KILPADSEHSAIFQCIQG
Sbjct: 176 GCAGLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQG 235

Query: 238 LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 297
           LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV
Sbjct: 236 LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 295

Query: 298 IEAHYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           IEAHYLFGA+YDNI+I+IHPQSIIHSM+ETQ
Sbjct: 296 IEAHYLFGADYDNIDIVIHPQSIIHSMIETQ 326

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51490971|emb|CAE00491.2| 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Populus tremula x Populus alba]

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 276/332 (83%), Positives = 301/332 (90%), Gaps = 9/332 (2%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQG----P 56
           MALN+  PAEIKA+SFL++T+SN RLPKL GG  LKRKD      GR +QCS Q     P
Sbjct: 1   MALNILSPAEIKAISFLDSTKSN-RLPKLQGGLCLKRKDCG----GRRIQCSVQNQNNQP 55

Query: 57  PPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL 116
           PPAWPGRA  E  RKTWDGPKPIS++GSTGSIGTQTLDIVAE+ DKF+VVALAAGSN+ L
Sbjct: 56  PPAWPGRACPEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVAL 115

Query: 117 LADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGI 176
           LADQV+ FKPQ++AVRNE L+DE+KEALA+VEEKPEI+ GEQGV+E ARHPDAV+VVTGI
Sbjct: 116 LADQVRTFKPQLIAVRNELLVDELKEALADVEEKPEIIPGEQGVVEVARHPDAVSVVTGI 175

Query: 177 VGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 236
           VGCAGLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+N+KILPADSEHSAIFQCIQ
Sbjct: 176 VGCAGLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQ 235

Query: 237 GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLE 296
           GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLE
Sbjct: 236 GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLE 295

Query: 297 VIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           VIEAHYLFGAEYDNI+I+IH QSIIHSM+ETQ
Sbjct: 296 VIEAHYLFGAEYDNIDIVIHQQSIIHSMIETQ 327

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|149944267|gb|AAY87151.2| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Rauvolfia verticillata]

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 273/330 (82%), Positives = 301/330 (91%), Gaps = 3/330 (0%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLP--KLSGGFPLKRKDNATATFGRIVQCSAQGPPP 58
           MALNL  P EIK +SFL++++SN+ L   KL GGF  K+KD   AT G+ +QCS Q PPP
Sbjct: 1   MALNLLSPTEIKTISFLDSSKSNYNLNLLKLQGGFAFKKKD-CGATVGKKIQCSVQPPPP 59

Query: 59  AWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA 118
           AWPGRAV E   KTW+G KPIS++GSTGSIGTQTLDIVAE+ DKFRVVALAAGSN+TLLA
Sbjct: 60  AWPGRAVAEPGYKTWEGQKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLA 119

Query: 119 DQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVG 178
           DQVK FKPQ+VAVRNESL+DE+KEAL++VE+KPEI+ GEQGV+E ARHPDAVTVVTGIVG
Sbjct: 120 DQVKTFKPQLVAVRNESLVDELKEALSDVEDKPEIIPGEQGVVEVARHPDAVTVVTGIVG 179

Query: 179 CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGL 238
           CAGLKPTVAAIEAGK+I LANKETLIAGGPFVLPLAHKH +KILPADSEHSAIFQCIQGL
Sbjct: 180 CAGLKPTVAAIEAGKNIVLANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGL 239

Query: 239 PEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVI 298
           PEGALRR+ILTASGGAFRDWPVEKLKEVKVADALKHPNW+MGKKITVDSATLFNKGLEVI
Sbjct: 240 PEGALRRVILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVI 299

Query: 299 EAHYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           EAHYLFGAEYDNI+I+IHPQSIIHSMVETQ
Sbjct: 300 EAHYLFGAEYDNIDIVIHPQSIIHSMVETQ 329

Source: Rauvolfia verticillata

Species: Rauvolfia verticillata

Genus: Rauvolfia

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|133753347|gb|ABO38177.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Croton stellatopilosus]

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 272/329 (82%), Positives = 302/329 (91%), Gaps = 7/329 (2%)

Query: 1   MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPP-A 59
           MALNL  PAEIK++SFL++ +SN +LPKL+G F LKRKD      GR VQCS Q PPP A
Sbjct: 1   MALNLLSPAEIKSISFLDSAKSN-QLPKLTGSFSLKRKD-----LGRKVQCSVQSPPPPA 54

Query: 60  WPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD 119
           WPG A  E  RKTWDGPKPIS++GSTGSIGTQTLDIVAE+ +KF+VVALAAGSN+TLLAD
Sbjct: 55  WPGTAFPEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPEKFKVVALAAGSNVTLLAD 114

Query: 120 QVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGC 179
           QVK FKPQ+VAVRNESL+DE+KEALA++EEKPEI+ GE+GV+E ARHPDA +VVTGIVGC
Sbjct: 115 QVKTFKPQLVAVRNESLVDELKEALADLEEKPEIIPGEEGVVEVARHPDAASVVTGIVGC 174

Query: 180 AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLP 239
           AGL+PTVAAIEAGKDI LANKETLIAGGPFVLPLA+K+N+KILPADSEHSAIFQCIQGLP
Sbjct: 175 AGLRPTVAAIEAGKDICLANKETLIAGGPFVLPLANKYNVKILPADSEHSAIFQCIQGLP 234

Query: 240 EGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE 299
           EGALRRIILTASGGAFRDWPVEKLK+VKVADALKHPNW+MGKKITVDSATLFNKGLEVIE
Sbjct: 235 EGALRRIILTASGGAFRDWPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIE 294

Query: 300 AHYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           AHYLFGA+YDNIEI+IHPQSIIHSMVETQ
Sbjct: 295 AHYLFGADYDNIEIVIHPQSIIHSMVETQ 323

Source: Croton stellatopilosus

Species: Croton stellatopilosus

Genus: Croton

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
TIGR_CMR|BA_3959	380	BA_3959 "1-deoxy-D-xylulose 5-	0.696	0.647	0.516	4.2e-63
TIGR_CMR|GSU_1915	386	GSU_1915 "1-deoxy-D-xylulose 5	0.640	0.585	0.548	1.3e-61
TIGR_CMR|BA_3409	385	BA_3409 "1-deoxy-D-xylulose 5-	0.651	0.597	0.489	1.4e-57
TIGR_CMR|SPO_1667	395	SPO_1667 "1-deoxy-D-xylulose 5	0.651	0.582	0.459	9.2e-52
TIGR_CMR|CHY_1778	384	CHY_1778 "1-deoxy-D-xylulose 5	0.643	0.591	0.478	3.7e-48
UNIPROTKB|P45568	398	dxr "Dxr" [Escherichia coli K-	0.651	0.577	0.45	4.2e-47
TIGR_CMR|CPS_1559	411	CPS_1559 "1-deoxy-D-xylulose 5	0.657	0.564	0.433	1.3e-45
TIGR_CMR|DET_0371	377	DET_0371 "1-deoxy-D-xylulose 5	0.668	0.625	0.436	2.4e-44
UNIPROTKB|Q9KPV8	402	dxr "1-deoxy-D-xylulose 5-phos	0.713	0.626	0.389	5e-44
TIGR_CMR|VC_2254	402	VC_2254 "1-deoxy-D-xylulose 5-	0.713	0.626	0.389	5e-44

TIGR_CMR|BA_3959 BA_3959 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 129/250 (51%), Positives = 167/250 (66%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K IS+LG++GSIGTQTLD++  H D+FR+VA + G NI      ++ F PQ+V+V+ E  
Sbjct:     2 KNISLLGASGSIGTQTLDVLRSHPDQFRLVAFSVGKNIDYAVKVIQEFSPQIVSVQREE- 60

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              D +K  L  V    +I+ G +G++E A HPDA  VV  +VG  GL PT+ AIEA K I 
Sbjct:    61 -DVLK--LQAVSGNTKIVYGSEGLLEVALHPDAEIVVNAVVGSVGLLPTLRAIEAKKTIG 117

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             +ANKETL+  G  V+  A KHN+ +LP DSEHSAIFQC+ G  E  + R+I+TASGG+FR
Sbjct:   118 IANKETLVTAGHLVMEAARKHNVSLLPVDSEHSAIFQCLNGENEKRISRLIITASGGSFR 177

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXX 316
             D   ++L  V V DAL+HPNWSMG KIT+DSAT+ NKGLEVIEAH+LFG  Y+       
Sbjct:   178 DKTRDELHHVTVEDALRHPNWSMGSKITIDSATMMNKGLEVIEAHWLFGIPYEQIDVVLH 237

Query:   317 XXXXXXXMVE 326
                    MVE
Sbjct:   238 KESIIHSMVE 247

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

TIGR_CMR|GSU_1915 GSU_1915 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 125/228 (54%), Positives = 164/228 (71%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K I++LGSTGSIG  TL++V+ H D+FRVVAL AG+N+ +L  Q++ F+PQ+V+V +E L
Sbjct:     2 KNITILGSTGSIGVSTLEVVSAHPDRFRVVALTAGNNLEMLRQQIETFRPQMVSVLSEKL 61

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
               E+  +L     KPEI  G +G+I AA   DA  VV  IVG AGL PT AAI AGKD+A
Sbjct:    62 AVELDRSLPGY--KPEIHYGVEGLIAAATAGDAHMVVAAIVGAAGLVPTAAAIRAGKDVA 119

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             LANKETL+  G  ++ L    N+++ P DSEHSA+FQ ++G     + RIILTASGG F 
Sbjct:   120 LANKETLVTAGRLIMDLVRDKNVRLYPVDSEHSAVFQSMEGQSRKDVLRIILTASGGPFL 179

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
             + P+++L  V + DAL HPNWSMG+KIT+DSAT+ NKGLEVIEA +LF
Sbjct:   180 NLPLDQLSRVSIDDALNHPNWSMGRKITIDSATMMNKGLEVIEARWLF 227

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

TIGR_CMR|BA_3409 BA_3409 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 114/233 (48%), Positives = 161/233 (69%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K IS+LGSTGSIGT  LD+V+ H + F++V L A  NI LL  Q+K F+P++V+V  + L
Sbjct:     3 KYISILGSTGSIGTSALDVVSAHPEHFKIVGLTANYNIELLEQQIKTFQPRIVSVATKEL 62

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              D ++     +    +I  G  G+I  A HP++  V++ +VG +GL PT+ A++A KDIA
Sbjct:    63 ADTLR---TRISTNTKITYGTDGLIAVATHPNSNLVLSSVVGVSGLLPTIEALKAKKDIA 119

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             +ANKETL+A G  V  LA ++  +++P DSEHSAIFQC+ G     + ++I+TASGGAFR
Sbjct:   120 IANKETLVAAGHIVTELAKQNGCRLIPVDSEHSAIFQCLNGENNKEIDKLIVTASGGAFR 179

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYD 309
             D   E++K ++  DALKHPNW MG K+T+DSATL NKG EV+EA +LF   Y+
Sbjct:   180 DKTREEMKTLQAKDALKHPNWLMGAKLTIDSATLMNKGFEVMEARWLFDIPYE 232

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

TIGR_CMR|SPO_1667 SPO_1667 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 107/233 (45%), Positives = 148/233 (63%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             + +S+ G+TGSIG  T+D++A   D + VVAL+ G+NI  LA   +R +  V        
Sbjct:     7 RKVSIFGATGSIGQNTIDLIARDPDAYDVVALSGGANIAQLAADARRLRADVAVTAFPER 66

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
             L +++ ALA      E  AG   ++EA   P A  V++ IVG AGL P +AA++ G  +A
Sbjct:    67 LHDLRAALAG--SGVEAAAGPAALVEAGARP-ADWVMSAIVGAAGLAPGLAALKQGATLA 123

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             LANKETL+  G  VL  A +H  ++LP DSEHSA+FQ + G    A+ RI++TASGGAFR
Sbjct:   124 LANKETLVCAGALVLETARRHGARLLPVDSEHSAVFQALVGEDMEAVERIVITASGGAFR 183

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYD 309
             DWP+E+L       A +HPNW MG++IT+DSA++FNK LEVIE    FG + D
Sbjct:   184 DWPLERLASATAEQAAQHPNWDMGQRITIDSASMFNKALEVIETREFFGIDPD 236

GO:0005737 "cytoplasm" evidence=ISS

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=ISS

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=ISS

TIGR_CMR|CHY_1778 CHY_1778 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 113/236 (47%), Positives = 151/236 (63%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K + +LGSTGSIG Q+L+++    DKF VVALAA  N  LL +Q  RFK     V++  L
Sbjct:     2 KKLVILGSTGSIGRQSLEVIEFFPDKFSVVALAAAKNGKLLLEQCLRFK-----VKHAFL 56

Query:   137 LDEIKEALANVEEKPE-IL--AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK 193
              DE        E K   IL   G + ++  A  P    ++T I G   L PT+ A++AGK
Sbjct:    57 ADEESYKTYYQEFKNHGILLTTGSKELLNLALLPGVDGIITAIPGTICLLPTIEALKAGK 116

Query:   194 DIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGG 253
              I LANKET++A G  + PL  K    +LP DSEHSAIFQ ++G     ++++++TASGG
Sbjct:   117 IIYLANKETMVAAGEIITPLM-KLGENLLPVDSEHSAIFQALRGEKLAWVKKLLITASGG 175

Query:   254 AFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYD 309
              FR++ +E+LK V VA+ALKHP W MG KIT+DSATL NKGLE+IEAH+LF   Y+
Sbjct:   176 PFREYTLEQLKNVTVAEALKHPRWKMGNKITIDSATLMNKGLEIIEAHFLFQIPYE 231

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=ISS

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=ISS

UNIPROTKB|P45568 dxr "Dxr" [Escherichia coli K-12 (taxid:83333)]

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 108/240 (45%), Positives = 147/240 (61%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct:     2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 61

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
                +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct:    62 AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 121

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC----IQ---G---LPEGALRRI 246
             LANKE+L+  G   +    +   ++LP DSEH+AIFQ     IQ   G   L +  +  I
Sbjct:   122 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 181

Query:   247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
             +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct:   182 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 241

GO:0070402 "NADPH binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0008299 "isoprenoid biosynthetic process" evidence=IEA

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=IEA;IDA

GO:0006744 "ubiquinone biosynthetic process" evidence=IDA

TIGR_CMR|CPS_1559 CPS_1559 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 107/247 (43%), Positives = 155/247 (62%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ-VVAVRNE- 134
             + + +LGSTGSIG  TLD+V  H ++F+V++LAA +++ ++ +Q   FKPQ VV V +E 
Sbjct:     4 RQLCILGSTGSIGCSTLDVVRLHPERFQVISLAAYTSVDVIFEQCIEFKPQQVVLVSSEH 63

Query:   135 -SLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK 193
              +LL + K   ANV     +L+GEQ +I+ A   ++ TV+  IVG +GL PT+AA+ AGK
Sbjct:    64 AALLTQ-KLNDANVSNIT-VLSGEQALIDIAECQNSDTVMASIVGASGLLPTLAAVNAGK 121

Query:   194 DIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG----------LPEGAL 243
              + LANKE L+  G   +        ++LP DSEH+AIFQC+            L    +
Sbjct:   122 RVLLANKEALVTSGAIFMAAVKASGAELLPIDSEHNAIFQCLPSQQQAEIGECQLLANGI 181

Query:   244 RRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYL 303
              +I+LT SGG FR   ++ L+ V  + A  HPNW MG+KI+VDSAT+ NKGLE IEA +L
Sbjct:   182 SKILLTGSGGPFRTRAIDTLESVTPSQACAHPNWDMGRKISVDSATMMNKGLEFIEAKWL 241

Query:   304 FGAEYDN 310
             F  E ++
Sbjct:   242 FNVEAED 248

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=ISS

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=ISS

TIGR_CMR|DET_0371 DET_0371 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 109/250 (43%), Positives = 146/250 (58%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             K I +LGSTGSIG QTL+++    D+F+V+ LA G+N  LL +Q ++F+P+ +  +N   
Sbjct:     6 KNIVILGSTGSIGRQTLEVIHSLPDRFKVLGLAGGTNANLLKEQTEQFRPKYIYCQN--- 62

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
               +     A        +  E    E A  P+A  VV    G AGL+P +AA  AGK IA
Sbjct:    63 CHDTNACTAR------FIPME----EMAALPEADIVVVATPGSAGLQPVLAAARAGKVIA 112

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
             LANKE+L++ G  V   A ++  KILP DSEHSAI+QC+ G      R IILTASGG FR
Sbjct:   113 LANKESLVSAGEIVTATAQENRAKILPVDSEHSAIWQCLSGEVTPPAR-IILTASGGPFR 171

Query:   257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNXXXXXX 316
                 +++ +V    ALKHP+W MG K+T+DSA+L NKGLE+IEA +LF     N      
Sbjct:   172 SLTKDEIAKVTPEQALKHPSWKMGTKVTIDSASLMNKGLEIIEARWLFDMPVRNIQVVIH 231

Query:   317 XXXXXXXMVE 326
                    MVE
Sbjct:   232 PQSIIHSMVE 241

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=ISS

GO:0030604 "1-deoxy-D-xylulose-5-phosphate reductoisomerase activity" evidence=ISS

UNIPROTKB|Q9KPV8 dxr "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 102/262 (38%), Positives = 149/262 (56%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             + +++LG+TGSIG  TL ++A++  +F +VAL AG N+  +    ++++P+   +   S 
Sbjct:     2 RKLTILGATGSIGASTLKVIAQNPQQFSIVALVAGVNVAKMYQLCQQWRPKYAVMATASA 61

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
               E++  L N     E+L GE+ + + A   D  TV+  IVG AGL PT+AA++AGK + 
Sbjct:    62 ASELQGLLKNQAMATEVLYGEEAMCQVAALDDVDTVMAAIVGAAGLLPTMAAVKAGKRVL 121

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC----IQ---G---LPEGALRRI 246
             LANKE L+  G   +    +   +++P DSEH+AIFQC    IQ   G   L +  +  I
Sbjct:   122 LANKEALVMSGQLFIDAVAQSGAELMPVDSEHNAIFQCLPTEIQTQLGRCDLSQHGIDHI 181

Query:   247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
             +LT SGG FR   +  L  V    A+ HPNWSMG KI+VDSAT+ NKGLE IEA +LF  
Sbjct:   182 LLTGSGGPFRYSDLATLDSVTPEQAIAHPNWSMGPKISVDSATMMNKGLEYIEAKWLFNT 241

Query:   307 EYDNXXXXXXXXXXXXXMVETQ 328
               +              MV+ Q
Sbjct:   242 SREQLKVLIHPQSVIHSMVQYQ 263

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

TIGR_CMR|VC_2254 VC_2254 "1-deoxy-D-xylulose 5-phosphate reductoisomerase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 102/262 (38%), Positives = 149/262 (56%)

Query:    77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
             + +++LG+TGSIG  TL ++A++  +F +VAL AG N+  +    ++++P+   +   S 
Sbjct:     2 RKLTILGATGSIGASTLKVIAQNPQQFSIVALVAGVNVAKMYQLCQQWRPKYAVMATASA 61

Query:   137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
               E++  L N     E+L GE+ + + A   D  TV+  IVG AGL PT+AA++AGK + 
Sbjct:    62 ASELQGLLKNQAMATEVLYGEEAMCQVAALDDVDTVMAAIVGAAGLLPTMAAVKAGKRVL 121

Query:   197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC----IQ---G---LPEGALRRI 246
             LANKE L+  G   +    +   +++P DSEH+AIFQC    IQ   G   L +  +  I
Sbjct:   122 LANKEALVMSGQLFIDAVAQSGAELMPVDSEHNAIFQCLPTEIQTQLGRCDLSQHGIDHI 181

Query:   247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
             +LT SGG FR   +  L  V    A+ HPNWSMG KI+VDSAT+ NKGLE IEA +LF  
Sbjct:   182 LLTGSGGPFRYSDLATLDSVTPEQAIAHPNWSMGPKISVDSATMMNKGLEYIEAKWLFNT 241

Query:   307 EYDNXXXXXXXXXXXXXMVETQ 328
               +              MV+ Q
Sbjct:   242 SREQLKVLIHPQSVIHSMVQYQ 263

GO:0008299 "isoprenoid biosynthetic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B7HLF4	DXR_BACC7	1, ., 1, ., 1, ., 2, 6, 7	0.544	0.6968	0.6473	yes	no
Q8YP49	DXR_NOSS1	1, ., 1, ., 1, ., 2, 6, 7	0.6904	0.7138	0.6315	yes	no
Q46JT6	DXR_PROMT	1, ., 1, ., 1, ., 2, 6, 7	0.6044	0.7082	0.6067	yes	no
Q55663	DXR_SYNY3	1, ., 1, ., 1, ., 2, 6, 7	0.7035	0.7138	0.6395	N/A	no
Q732P8	DXR_BACC1	1, ., 1, ., 1, ., 2, 6, 7	0.544	0.6968	0.6473	yes	no
Q7NID1	DXR_GLOVI	1, ., 1, ., 1, ., 2, 6, 7	0.66	0.7082	0.6377	yes	no
B3E7B0	DXR_GEOLS	1, ., 1, ., 1, ., 2, 6, 7	0.556	0.7025	0.6358	yes	no
A9KMX2	DXR_CLOPH	1, ., 1, ., 1, ., 2, 6, 7	0.5595	0.7053	0.6417	yes	no
A8MHH5	DXR_ALKOO	1, ., 1, ., 1, ., 2, 6, 7	0.5458	0.6968	0.6456	yes	no
Q319Z8	DXR_PROM9	1, ., 1, ., 1, ., 2, 6, 7	0.6315	0.7138	0.6176	yes	no
Q81WL4	DXR2_BACAN	1, ., 1, ., 1, ., 2, 6, 7	0.544	0.6968	0.6473	yes	no
Q3MDL2	DXR_ANAVT	1, ., 1, ., 1, ., 2, 6, 7	0.6984	0.7138	0.6331	yes	no
B7KAT5	DXR_CYAP7	1, ., 1, ., 1, ., 2, 6, 7	0.7103	0.7138	0.6331	yes	no
Q31N26	DXR_SYNE7	1, ., 1, ., 1, ., 2, 6, 7	0.6679	0.7138	0.6268	yes	no
B7K5G6	DXR_CYAP8	1, ., 1, ., 1, ., 2, 6, 7	0.7182	0.7138	0.6331	yes	no
B0CD21	DXR_ACAM1	1, ., 1, ., 1, ., 2, 6, 7	0.7301	0.7138	0.6284	yes	no
B3QXY0	DXR_CHLT3	1, ., 1, ., 1, ., 2, 6, 7	0.5090	0.7393	0.6744	yes	no
Q636K5	DXR2_BACCZ	1, ., 1, ., 1, ., 2, 6, 7	0.544	0.6968	0.6473	yes	no
Q0IBN9	DXR_SYNS3	1, ., 1, ., 1, ., 2, 6, 7	0.6156	0.7082	0.6009	yes	no
A2C3T8	DXR_PROM1	1, ., 1, ., 1, ., 2, 6, 7	0.6082	0.7082	0.6067	yes	no
A2BXK2	DXR_PROM5	1, ., 1, ., 1, ., 2, 6, 7	0.6090	0.7138	0.6161	yes	no
Q8DK30	DXR_THEEB	1, ., 1, ., 1, ., 2, 6, 7	0.7023	0.7138	0.6101	yes	no
Q2JM39	DXR_SYNJB	1, ., 1, ., 1, ., 2, 6, 7	0.656	0.7082	0.6377	yes	no
C0ZF60	DXR_BREBN	1, ., 1, ., 1, ., 2, 6, 7	0.5436	0.7110	0.6570	yes	no
C4Z5K1	DXR_EUBE2	1, ., 1, ., 1, ., 2, 6, 7	0.54	0.6997	0.65	yes	no
Q7V0W0	DXR_PROMP	1, ., 1, ., 1, ., 2, 6, 7	0.6145	0.7025	0.6138	yes	no
Q9XFS9	DXR_ARATH	1, ., 1, ., 1, ., 2, 6, 7	0.8078	0.9235	0.6834	yes	no
Q9XES0	DXR_MENPI	1, ., 1, ., 1, ., 2, 6, 7	0.8123	0.9065	0.6808	N/A	no
Q7U8C3	DXR_SYNPX	1, ., 1, ., 1, ., 2, 6, 7	0.6091	0.6968	0.6014	yes	no
B2ITX3	DXR_NOSP7	1, ., 1, ., 1, ., 2, 6, 7	0.7023	0.7138	0.6331	yes	no
C1EP45	DXR_BACC3	1, ., 1, ., 1, ., 2, 6, 7	0.544	0.6968	0.6473	yes	no
Q74BW4	DXR_GEOSL	1, ., 1, ., 1, ., 2, 6, 7	0.52	0.7393	0.6761	yes	no
Q6HEZ4	DXR2_BACHK	1, ., 1, ., 1, ., 2, 6, 7	0.544	0.6968	0.6473	yes	no
Q3AI71	DXR_SYNSC	1, ., 1, ., 1, ., 2, 6, 7	0.6165	0.7082	0.6024	yes	no
B9IVB0	DXR_BACCQ	1, ., 1, ., 1, ., 2, 6, 7	0.544	0.6968	0.6473	yes	no
Q9RCT1	DXR_SYNP6	1, ., 1, ., 1, ., 2, 6, 7	0.6679	0.7138	0.6268	yes	no
B4S387	DXR_PROA2	1, ., 1, ., 1, ., 2, 6, 7	0.556	0.7025	0.6492	yes	no
B8HVK1	DXR_CYAP4	1, ., 1, ., 1, ., 2, 6, 7	0.7023	0.7138	0.6511	yes	no
Q9KA69	DXR_BACHD	1, ., 1, ., 1, ., 2, 6, 7	0.5657	0.6968	0.6439	yes	no
B9M5C0	DXR_GEOSF	1, ., 1, ., 1, ., 2, 6, 7	0.5163	0.7393	0.6796	yes	no
Q8KG43	DXR_CHLTE	1, ., 1, ., 1, ., 2, 6, 7	0.5345	0.7393	0.6832	yes	no
A5G7W2	DXR_GEOUR	1, ., 1, ., 1, ., 2, 6, 7	0.5418	0.7393	0.6761	yes	no
Q819Y3	DXR2_BACCR	1, ., 1, ., 1, ., 2, 6, 7	0.544	0.6968	0.6473	yes	no
Q2JXQ9	DXR_SYNJA	1, ., 1, ., 1, ., 2, 6, 7	0.6733	0.7025	0.6326	yes	no
Q8W250	DXR_ORYSJ	1, ., 1, ., 1, ., 2, 6, 7	0.7811	0.9263	0.6913	yes	no
B1WNP5	DXR_CYAA5	1, ., 1, ., 1, ., 2, 6, 7	0.7380	0.7138	0.6331	yes	no
B0JWW6	DXR_MICAN	1, ., 1, ., 1, ., 2, 6, 7	0.7142	0.7138	0.6461	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.963
4th Layer	1.1.1.267	0.946

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00016085001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (471 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00035363001	SubName- Full=Chromosome undetermined scaffold_77, whole genome shotgun sequence; (238 aa)	•		•	•		•	•		0.996
	GSVIVG00031403001	SubName- Full=Chromosome chr11 scaffold_56, whole genome shotgun sequence; (674 aa)			•			•	•		0.984
	GSVIVG00031458001	SubName- Full=Chromosome chr11 scaffold_56, whole genome shotgun sequence; (690 aa)			•			•	•		0.983
	GSVIVG00031462001	SubName- Full=Chromosome chr11 scaffold_56, whole genome shotgun sequence; (690 aa)			•			•	•		0.982
	GSVIVG00019845001	SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (711 aa)			•			•	•		0.981
	GSVIVG00032595001	SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (665 aa)			•			•	•		0.977
	GSVIVG00012707001	SubName- Full=Chromosome undetermined scaffold_3295, whole genome shotgun sequence; Flags- Frag [...] (416 aa)			•			•	•		0.972
	GSVIVG00024531001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (740 aa)	•		•	•			•		0.971
	GSVIVG00002540001	RecName- Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; EC=4.6.1.12; (183 aa)	•		•	•		•	•		0.968
	GSVIVG00024111001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (311 aa)	•				•		•		0.934

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	353
PLN02696	454	PLN02696, PLN02696, 1-deoxy-D-xylulose-5-phosphate	0.0
PRK05447	385	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate	1e-159
COG0743	385	COG0743, Dxr, 1-deoxy-D-xylulose 5-phosphate reduc	1e-139
TIGR00243	389	TIGR00243, Dxr, 1-deoxy-D-xylulose 5-phosphate red	1e-124
PRK12464	383	PRK12464, PRK12464, 1-deoxy-D-xylulose 5-phosphate	1e-119
pfam02670	129	pfam02670, DXP_reductoisom, 1-deoxy-D-xylulose 5-p	7e-66
pfam08436	84	pfam08436, DXP_redisom_C, 1-deoxy-D-xylulose 5-pho	2e-55
COG0460	333	COG0460, ThrA, Homoserine dehydrogenase [Amino aci	0.002

>gnl|CDD|215374 PLN02696, PLN02696, 1-deoxy-D-xylulose-5-phosphate reductoisomerase

 Score =  589 bits (1520), Expect = 0.0
 Identities = 251/309 (81%), Positives = 278/309 (89%), Gaps = 6/309 (1%)

Query: 25  RLPKLSGGFPLKRKDNATATFGRIVQCS-----AQGPPPAWPGRAVTETFRKTWDGPKPI 79
            LPKL GGF  KR   +  + GR  +CS        PPPAWPGRAV E  RK WDGPKPI
Sbjct: 2   PLPKLPGGFTTKRSS-SRQSRGRRAKCSVAGWSQNSPPPAWPGRAVVEPGRKGWDGPKPI 60

Query: 80  SVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDE 139
           S+LGSTGSIGTQTLDIVAE+ DKF+VVALAAGSN+TLLADQV++FKP++VAVRNESL+DE
Sbjct: 61  SLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVRKFKPKLVAVRNESLVDE 120

Query: 140 IKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALAN 199
           +KEALA++++KPEI+ GE+G++E ARHP+AVTVVTGIVGCAGLKPTVAAIEAGKDIALAN
Sbjct: 121 LKEALADLDDKPEIIPGEEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALAN 180

Query: 200 KETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWP 259
           KETLIAGGPFVLPLA KH +KILPADSEHSAIFQCIQGLPEG LRRIILTASGGAFRDWP
Sbjct: 181 KETLIAGGPFVLPLAKKHGVKILPADSEHSAIFQCIQGLPEGGLRRIILTASGGAFRDWP 240

Query: 260 VEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQS 319
           VEKLKEVKVADALKHPNWSMGKKITVDSATL NKGLEVIEAHYLFGA+YD+I+I+IHPQS
Sbjct: 241 VEKLKEVKVADALKHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGADYDDIDIVIHPQS 300

Query: 320 IIHSMVETQ 328
           IIHSMVETQ
Sbjct: 301 IIHSMVETQ 309

Length = 454

>gnl|CDD|235472 PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

 Score =  450 bits (1160), Expect = e-159
 Identities = 153/251 (60%), Positives = 189/251 (75%), Gaps = 2/251 (0%)

Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
            K I++LGSTGSIGTQTLD++  + D+FRVVAL+AG N+ LLA+Q + F+P+ V V +E 
Sbjct: 1   MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEE 60

Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
              E+KEALA      E+LAGE+G+ E A  P+A  VV  IVG AGL PT+AAI AGK I
Sbjct: 61  AAKELKEALA--AAGIEVLAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRI 118

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAF 255
           ALANKE+L+  G  V+  A K   +ILP DSEHSAIFQC+ G  +  + +IILTASGG F
Sbjct: 119 ALANKESLVCAGELVMDAAKKSGAQILPVDSEHSAIFQCLPGEKQEGVEKIILTASGGPF 178

Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII 315
           RDWP+E+L  V    ALKHPNWSMG+KIT+DSAT+ NKGLEVIEAH+LFG  Y+ IE++I
Sbjct: 179 RDWPLEELANVTPEQALKHPNWSMGRKITIDSATMMNKGLEVIEAHWLFGLPYEQIEVVI 238

Query: 316 HPQSIIHSMVE 326
           HPQSIIHSMVE
Sbjct: 239 HPQSIIHSMVE 249

Length = 385

>gnl|CDD|223814 COG0743, Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]

 Score =  398 bits (1026), Expect = e-139
 Identities = 145/251 (57%), Positives = 187/251 (74%), Gaps = 4/251 (1%)

Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
            K +++LGSTGSIGTQTLD++  + DKF VVALAAG N+ LLA+Q++ FKP+ V + +ES
Sbjct: 1   MKKLTILGSTGSIGTQTLDVIRRNPDKFEVVALAAGKNVELLAEQIREFKPKYVVIADES 60

Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
              E+++ L   E    +L GE+G+ E A   DA  V+  IVG AGL PT+AAI+AGK I
Sbjct: 61  AAKELEDLLPGTE----VLVGEEGLCELAAEDDADVVMNAIVGAAGLLPTLAAIKAGKTI 116

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAF 255
           ALANKE+L+  G  V+  A +   ++LP DSEH+AIFQC+QG  +  +++IILTASGG F
Sbjct: 117 ALANKESLVTAGELVMDAAKESGAQLLPVDSEHNAIFQCLQGETQKGVKKIILTASGGPF 176

Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII 315
           RD  +E+L  V    ALKHPNWSMG+KITVDSAT+ NKGLEVIEAH+LFG  Y+ IE++I
Sbjct: 177 RDKSLEELANVTPEQALKHPNWSMGRKITVDSATMMNKGLEVIEAHWLFGLPYEQIEVVI 236

Query: 316 HPQSIIHSMVE 326
           HPQSIIHSMVE
Sbjct: 237 HPQSIIHSMVE 247

Length = 385

>gnl|CDD|161787 TIGR00243, Dxr, 1-deoxy-D-xylulose 5-phosphate reductoisomerase

 Score =  362 bits (930), Expect = e-124
 Identities = 140/253 (55%), Positives = 180/253 (71%), Gaps = 1/253 (0%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K I +LGSTGSIG  TLD+V  + D F+VVAL+AG N+ L+ +Q+  F+P+ VA+ +E+ 
Sbjct: 2   KQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNVALMVEQILEFRPKFVAIDDEAS 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
           L ++K  L     + E+L GE+G+ E A   D   V+  IVG AGL PT+AAI AGK IA
Sbjct: 62  LKDLKTMLQQQGSRTEVLVGEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIA 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ-GLPEGALRRIILTASGGAF 255
           LANKE+L+  G   L    K+ +++LP DSEH+AIFQ +Q GL E  +  IILTASGGAF
Sbjct: 122 LANKESLVTAGHLFLDAVKKYGVQLLPVDSEHNAIFQSLQHGLEELGVVSIILTASGGAF 181

Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII 315
           RD P+E L  V    ALKHPNWSMG+KIT+DSAT+ NKGLE IEA +LFGA  + I+++I
Sbjct: 182 RDTPLEDLPTVTPQQALKHPNWSMGRKITIDSATMMNKGLEYIEARWLFGASAEQIDVLI 241

Query: 316 HPQSIIHSMVETQ 328
           HPQSIIHSMVE Q
Sbjct: 242 HPQSIIHSMVEFQ 254

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]. Length = 389

>gnl|CDD|237107 PRK12464, PRK12464, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

 Score =  348 bits (894), Expect = e-119
 Identities = 128/248 (51%), Positives = 174/248 (70%), Gaps = 2/248 (0%)

Query: 81  VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEI 140
           +LGSTGSIGT  LD+V+ H + F+VV L A  NI LL  Q+KRF+P++V+V ++ L D +
Sbjct: 1   ILGSTGSIGTSALDVVSAHPEHFKVVGLTANYNIELLEQQIKRFQPRIVSVADKELADTL 60

Query: 141 KEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANK 200
           +  L+    K  I  G  G+I  A HP +  V++ +VG AGL PT+ A++A KDIALANK
Sbjct: 61  RTRLSANTSK--ITYGTDGLIAVATHPGSDLVLSSVVGAAGLLPTIEALKAKKDIALANK 118

Query: 201 ETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPV 260
           ETL+A G  V  LA ++  +++P DSEHSAIFQC+ G     + ++I+TASGGAFRD   
Sbjct: 119 ETLVAAGHIVTDLAKQNGCRLIPVDSEHSAIFQCLNGENNKEIDKLIVTASGGAFRDKTR 178

Query: 261 EKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSI 320
           E++  +   DALKHPNW MG K+T+DSATL NKG EVIEAH+LF   Y+ I+++IH +SI
Sbjct: 179 EEMATLTAKDALKHPNWLMGAKLTIDSATLMNKGFEVIEAHWLFDIPYEKIDVLIHKESI 238

Query: 321 IHSMVETQ 328
           IHS+VE  
Sbjct: 239 IHSLVEFI 246

Length = 383

>gnl|CDD|217176 pfam02670, DXP_reductoisom, 1-deoxy-D-xylulose 5-phosphate reductoisomerase

 Score =  203 bits (520), Expect = 7e-66
 Identities = 78/129 (60%), Positives = 100/129 (77%)

Query: 79  ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD 138
           I++LGSTGSIGTQTLD++  + D+F VVAL+AG N+ LLA+Q+K FKP+ VAV +E   +
Sbjct: 1   ITILGSTGSIGTQTLDVIRRNPDRFEVVALSAGRNVELLAEQIKEFKPKYVAVADEEAAE 60

Query: 139 EIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA 198
           E+KEALA    K E+LAGE+G+ E A  P+A  VV  IVG AGL PT+AAI+AGK IALA
Sbjct: 61  ELKEALAGAGLKTEVLAGEEGLCELAALPEADIVVNAIVGAAGLLPTLAAIKAGKTIALA 120

Query: 199 NKETLIAGG 207
           NKE+L+A G
Sbjct: 121 NKESLVAAG 129

This is a family of 1-deoxy-D-xylulose 5-phosphate reductoisomerases. This enzyme catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH. This reaction is part of the terpenoid biosynthesis pathway. Length = 129

>gnl|CDD|203943 pfam08436, DXP_redisom_C, 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal

 Score =  175 bits (447), Expect = 2e-55
 Identities = 59/84 (70%), Positives = 68/84 (80%)

Query: 221 ILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMG 280
           ILP DSEHSAIFQC+QG  +  + +IILTASGG FRDW +E+L  V    ALKHPNWSMG
Sbjct: 1   ILPVDSEHSAIFQCLQGENKKEVEKIILTASGGPFRDWSLEELANVTPEQALKHPNWSMG 60

Query: 281 KKITVDSATLFNKGLEVIEAHYLF 304
            KIT+DSAT+ NKGLEVIEAH+LF
Sbjct: 61  AKITIDSATMMNKGLEVIEAHWLF 84

This domain is found to the C-terminus of pfam02670 domains in bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases which catalyze the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH. Length = 84

>gnl|CDD|223536 COG0460, ThrA, Homoserine dehydrogenase [Amino acid transport and metabolism]

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 19/147 (12%)

Query: 79  ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD 138
           + +LG  G++G+  L+I+AE +++   +   AG  I ++A   +        VR+  LL+
Sbjct: 6   VGLLG-LGTVGSGVLEILAEKQEE---LRKRAGIEIRVVAVADRD----GSLVRDLDLLN 57

Query: 139 -EIKEALANVEEKPEILAGEQ--GVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
            E+      +    E+L  E    V+E         V   +         + A+E GK +
Sbjct: 58  AEVWTTDGALSLGDEVLLDEDIDVVVEL--------VGGDVEPAEPADLYLKALENGKHV 109

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKIL 222
             ANK  L      +   A K+ +K+L
Sbjct: 110 VTANKALLALHYHELREAAEKNGVKLL 136

Length = 333

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	353
PLN02696	454	1-deoxy-D-xylulose-5-phosphate reductoisomerase	100.0
TIGR00243	389	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	100.0
COG0743	385	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	100.0
PRK12464	383	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	100.0
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	100.0
PF08436	84	DXP_redisom_C: 1-deoxy-D-xylulose 5-phosphate redu	100.0
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	100.0
PRK06349	426	homoserine dehydrogenase; Provisional	98.38
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	98.16
PRK06270	341	homoserine dehydrogenase; Provisional	97.95
PRK13303	265	L-aspartate dehydrogenase; Provisional	97.94
PRK11579	346	putative oxidoreductase; Provisional	97.92
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	97.9
COG0673	342	MviM Predicted dehydrogenases and related proteins	97.86
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	97.78
PRK08374	336	homoserine dehydrogenase; Provisional	97.67
PRK06813	346	homoserine dehydrogenase; Validated	97.62
PRK06392	326	homoserine dehydrogenase; Provisional	97.56
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.53
PRK13304	265	L-aspartate dehydrogenase; Reviewed	97.49
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.39
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.2
TIGR01761	343	thiaz-red thiazolinyl imide reductase. This reduct	97.18
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	97.17
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.04
PRK09466	810	metL bifunctional aspartate kinase II/homoserine d	96.96
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	96.95
COG4091	438	Predicted homoserine dehydrogenase [Amino acid tra	96.79
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.79
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.78
COG0460	333	ThrA Homoserine dehydrogenase [Amino acid transpor	96.7
PRK08300	302	acetaldehyde dehydrogenase; Validated	96.7
PRK09436	819	thrA bifunctional aspartokinase I/homoserine dehyd	96.67
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.57
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.5
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.43
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.17
PLN02700	377	homoserine dehydrogenase family protein	96.14
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.99
PRK10206	344	putative oxidoreductase; Provisional	95.94
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.81
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.8
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.78
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	95.63
PRK10538	248	malonic semialdehyde reductase; Provisional	95.52
PRK08219	227	short chain dehydrogenase; Provisional	95.51
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	95.47
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	95.46
PLN02778	298	3,5-epimerase/4-reductase	95.42
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.3
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	95.17
PRK08267	260	short chain dehydrogenase; Provisional	95.15
PRK07326	237	short chain dehydrogenase; Provisional	95.13
PRK07806	248	short chain dehydrogenase; Provisional	95.1
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.1
PRK12829	264	short chain dehydrogenase; Provisional	95.08
TIGR03855	229	NAD_NadX aspartate dehydrogenase. Members of this	95.03
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	94.94
PRK06101	240	short chain dehydrogenase; Provisional	94.91
PRK09186	256	flagellin modification protein A; Provisional	94.87
PRK12828	239	short chain dehydrogenase; Provisional	94.79
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.79
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.76
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	94.73
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.73
PRK07024	257	short chain dehydrogenase; Provisional	94.7
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.7
PRK06057	255	short chain dehydrogenase; Provisional	94.6
PRK07523	255	gluconate 5-dehydrogenase; Provisional	94.54
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.46
PLN02583	297	cinnamoyl-CoA reductase	94.46
PRK06947	248	glucose-1-dehydrogenase; Provisional	94.43
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	94.42
PRK06701	290	short chain dehydrogenase; Provisional	94.4
PRK06196	315	oxidoreductase; Provisional	94.35
PRK05717	255	oxidoreductase; Validated	94.28
PRK07454	241	short chain dehydrogenase; Provisional	94.26
PRK05693	274	short chain dehydrogenase; Provisional	94.26
PRK07825	273	short chain dehydrogenase; Provisional	94.24
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	94.22
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.19
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	94.17
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	94.14
PLN02383	344	aspartate semialdehyde dehydrogenase	94.14
PRK08226	263	short chain dehydrogenase; Provisional	94.13
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	94.13
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.13
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	94.1
PRK12743	256	oxidoreductase; Provisional	94.09
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	94.09
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.06
PRK06138	252	short chain dehydrogenase; Provisional	94.06
PRK08265	261	short chain dehydrogenase; Provisional	94.05
PRK06500	249	short chain dehydrogenase; Provisional	94.03
PRK06182	273	short chain dehydrogenase; Validated	94.01
PRK08628	258	short chain dehydrogenase; Provisional	94.01
PRK12939	250	short chain dehydrogenase; Provisional	94.01
PRK07774	250	short chain dehydrogenase; Provisional	93.97
PRK08278	273	short chain dehydrogenase; Provisional	93.94
PRK12827	249	short chain dehydrogenase; Provisional	93.91
PRK06482	276	short chain dehydrogenase; Provisional	93.9
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	93.89
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	93.88
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	93.88
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.86
PRK08263	275	short chain dehydrogenase; Provisional	93.85
CHL00194	317	ycf39 Ycf39; Provisional	93.76
PRK08643	256	acetoin reductase; Validated	93.75
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	93.75
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	93.71
PRK06180	277	short chain dehydrogenase; Provisional	93.69
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.64
PRK07067	257	sorbitol dehydrogenase; Provisional	93.64
PRK07814	263	short chain dehydrogenase; Provisional	93.64
PRK06194	287	hypothetical protein; Provisional	93.61
PRK09135	249	pteridine reductase; Provisional	93.57
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	93.56
PRK06949	258	short chain dehydrogenase; Provisional	93.54
PRK06181	263	short chain dehydrogenase; Provisional	93.54
PRK07035	252	short chain dehydrogenase; Provisional	93.52
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	93.51
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	93.51
PRK05866	293	short chain dehydrogenase; Provisional	93.5
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	93.47
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	93.46
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	93.45
PRK08589	272	short chain dehydrogenase; Validated	93.44
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	93.39
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	93.38
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	93.37
PLN02260	668	probable rhamnose biosynthetic enzyme	93.36
PRK07890	258	short chain dehydrogenase; Provisional	93.32
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	93.32
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.26
PLN00016	378	RNA-binding protein; Provisional	93.22
PRK06172	253	short chain dehydrogenase; Provisional	93.21
PRK09134	258	short chain dehydrogenase; Provisional	93.19
PLN02260	668	probable rhamnose biosynthetic enzyme	93.18
PRK12742	237	oxidoreductase; Provisional	93.18
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	93.14
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	93.12
PRK07453	322	protochlorophyllide oxidoreductase; Validated	93.1
PLN00112	444	malate dehydrogenase (NADP); Provisional	93.08
PRK12935	247	acetoacetyl-CoA reductase; Provisional	93.07
PRK07060	245	short chain dehydrogenase; Provisional	93.06
PRK12744	257	short chain dehydrogenase; Provisional	93.05
PRK05867	253	short chain dehydrogenase; Provisional	93.04
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	93.02
PRK07831	262	short chain dehydrogenase; Provisional	92.99
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	92.97
PLN03209	576	translocon at the inner envelope of chloroplast su	92.96
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	92.92
PRK06924	251	short chain dehydrogenase; Provisional	92.9
PRK06124	256	gluconate 5-dehydrogenase; Provisional	92.86
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	92.82
PRK07832	272	short chain dehydrogenase; Provisional	92.82
PRK08017	256	oxidoreductase; Provisional	92.81
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	92.79
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	92.79
PRK07063	260	short chain dehydrogenase; Provisional	92.79
PRK06841	255	short chain dehydrogenase; Provisional	92.77
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	92.76
PLN02240	352	UDP-glucose 4-epimerase	92.74
PRK05875	276	short chain dehydrogenase; Provisional	92.74
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	92.72
PRK09242	257	tropinone reductase; Provisional	92.72
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	92.7
PRK06128	300	oxidoreductase; Provisional	92.7
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	92.67
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	92.63
PRK05872	296	short chain dehydrogenase; Provisional	92.62
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	92.49
PRK07102	243	short chain dehydrogenase; Provisional	92.44
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	92.4
COG2910	211	Putative NADH-flavin reductase [General function p	92.37
PRK06197	306	short chain dehydrogenase; Provisional	92.36
PRK07074	257	short chain dehydrogenase; Provisional	92.32
PRK08177	225	short chain dehydrogenase; Provisional	92.3
PLN02572	442	UDP-sulfoquinovose synthase	92.27
PRK09072	263	short chain dehydrogenase; Provisional	92.27
PRK05650	270	short chain dehydrogenase; Provisional	92.26
PRK06914	280	short chain dehydrogenase; Provisional	92.25
PRK12937	245	short chain dehydrogenase; Provisional	92.24
TIGR01921	324	DAP-DH diaminopimelate dehydrogenase. This model r	92.24
PRK07201	657	short chain dehydrogenase; Provisional	92.22
PRK07478	254	short chain dehydrogenase; Provisional	92.13
COG0300	265	DltE Short-chain dehydrogenases of various substra	92.13
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	92.11
PRK12746	254	short chain dehydrogenase; Provisional	92.11
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	92.1
PLN02427	386	UDP-apiose/xylose synthase	92.08
PRK06483	236	dihydromonapterin reductase; Provisional	92.08
COG2201	350	CheB Chemotaxis response regulator containing a Ch	92.08
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.05
PRK07097	265	gluconate 5-dehydrogenase; Provisional	92.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	91.98
PRK06198	260	short chain dehydrogenase; Provisional	91.91
PRK07904	253	short chain dehydrogenase; Provisional	91.89
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	91.87
PLN02253	280	xanthoxin dehydrogenase	91.86
PRK07109	334	short chain dehydrogenase; Provisional	91.85
PRK08085	254	gluconate 5-dehydrogenase; Provisional	91.85
PRK08340	259	glucose-1-dehydrogenase; Provisional	91.84
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.81
PRK05854	313	short chain dehydrogenase; Provisional	91.69
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.67
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	91.65
PRK12938	246	acetyacetyl-CoA reductase; Provisional	91.64
PRK05993	277	short chain dehydrogenase; Provisional	91.64
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	91.54
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	91.52
TIGR02415	254	23BDH acetoin reductases. One member of this famil	91.49
PRK07576	264	short chain dehydrogenase; Provisional	91.48
PRK06139	330	short chain dehydrogenase; Provisional	91.46
PLN02653	340	GDP-mannose 4,6-dehydratase	91.33
PRK07775	274	short chain dehydrogenase; Provisional	91.31
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	91.3
PRK08862	227	short chain dehydrogenase; Provisional	91.28
TIGR01746	367	Thioester-redct thioester reductase domain. It has	91.25
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	91.21
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	91.21
PRK08213	259	gluconate 5-dehydrogenase; Provisional	91.14
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	91.11
PRK06179	270	short chain dehydrogenase; Provisional	91.08
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	91.05
PRK10675	338	UDP-galactose-4-epimerase; Provisional	91.03
PRK08339	263	short chain dehydrogenase; Provisional	90.97
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	90.95
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.93
PF00551	181	Formyl_trans_N: Formyl transferase; InterPro: IPR0	90.83
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	90.79
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	90.77
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	90.77
TIGR00639	190	PurN phosphoribosylglycinamide formyltransferase,	90.7
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	90.69
PLN02503	605	fatty acyl-CoA reductase 2	90.56
PRK07062	265	short chain dehydrogenase; Provisional	90.53
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	90.49
PRK09291	257	short chain dehydrogenase; Provisional	90.42
TIGR01546	333	GAPDH-II_archae glyceraldehyde-3-phosphate dehydro	90.34
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	90.33
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	90.24
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	90.23
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	90.21
PRK06123	248	short chain dehydrogenase; Provisional	90.19
PLN02214	342	cinnamoyl-CoA reductase	90.13
PRK08251	248	short chain dehydrogenase; Provisional	90.11
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	90.1
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	90.08
PRK06114	254	short chain dehydrogenase; Provisional	90.04
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	90.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	89.98
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	89.95
PRK12824	245	acetoacetyl-CoA reductase; Provisional	89.94
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	89.9
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	89.88
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	89.87
PRK07985	294	oxidoreductase; Provisional	89.74
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	89.66
PRK05876	275	short chain dehydrogenase; Provisional	89.66
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	89.64
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	89.56
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	89.56
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	89.54
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	89.49
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	89.49
PRK05855	582	short chain dehydrogenase; Validated	89.46
PRK13535	336	erythrose 4-phosphate dehydrogenase; Provisional	89.45
PLN02896	353	cinnamyl-alcohol dehydrogenase	89.45
KOG4777	361	consensus Aspartate-semialdehyde dehydrogenase [Am	89.45
PRK08277	278	D-mannonate oxidoreductase; Provisional	89.44
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	89.37
PRK14982	340	acyl-ACP reductase; Provisional	89.28
PRK07023	243	short chain dehydrogenase; Provisional	89.26
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	89.22
PRK05884	223	short chain dehydrogenase; Provisional	89.22
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	89.2
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	89.06
PRK06484	520	short chain dehydrogenase; Validated	89.04
PRK07417	279	arogenate dehydrogenase; Reviewed	89.02
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	89.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	89.0
PRK06953	222	short chain dehydrogenase; Provisional	88.99
PRK06484	520	short chain dehydrogenase; Validated	88.96
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	88.87
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	88.8
PRK08936	261	glucose-1-dehydrogenase; Provisional	88.72
PRK07677	252	short chain dehydrogenase; Provisional	88.59
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	88.46
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	88.39
PRK07069	251	short chain dehydrogenase; Validated	88.38
PLN02206	442	UDP-glucuronate decarboxylase	88.35
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	88.28
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	88.27
PRK08703	239	short chain dehydrogenase; Provisional	88.24
PRK07577	234	short chain dehydrogenase; Provisional	88.17
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	88.1
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	88.05
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	88.05
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	88.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.95
PLN02650	351	dihydroflavonol-4-reductase	87.92
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	87.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	87.8
KOG2741	351	consensus Dimeric dihydrodiol dehydrogenase [Carbo	87.74
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	87.59
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	87.46
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	87.44
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	87.37
PRK07201	657	short chain dehydrogenase; Provisional	87.26
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	87.19
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	87.13
PLN00198	338	anthocyanidin reductase; Provisional	87.08
PRK13011	286	formyltetrahydrofolate deformylase; Reviewed	87.03
PRK06027	286	purU formyltetrahydrofolate deformylase; Reviewed	86.81
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	86.74
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	86.73
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	86.7
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	86.6
PRK07791	286	short chain dehydrogenase; Provisional	86.57
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	86.54
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	86.49
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	86.48
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	86.26
TIGR00655	280	PurU formyltetrahydrofolate deformylase. This mode	86.25
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	86.25
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	86.22
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	86.0
COG3320	382	Putative dehydrogenase domain of multifunctional n	85.86
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	85.86
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	85.83
PRK10124	463	putative UDP-glucose lipid carrier transferase; Pr	85.83
PLN02780	320	ketoreductase/ oxidoreductase	85.81
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	85.78
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	85.73
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	85.7
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	85.65
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	85.61
PRK06125	259	short chain dehydrogenase; Provisional	85.54
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	85.08
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	85.02
PRK07856	252	short chain dehydrogenase; Provisional	84.98
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	84.94
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	84.88
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	84.76
TIGR03025	445	EPS_sugtrans exopolysaccharide biosynthesis polypr	84.72
PRK08303	305	short chain dehydrogenase; Provisional	84.69
PLN02686	367	cinnamoyl-CoA reductase	84.64
PRK08324	681	short chain dehydrogenase; Validated	84.62
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	84.59
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	84.45
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	84.28
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	84.2
PLN02514	357	cinnamyl-alcohol dehydrogenase	83.99
PRK05472	213	redox-sensing transcriptional repressor Rex; Provi	83.99
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	83.97
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	83.9
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	83.37
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	83.22
PRK06940	275	short chain dehydrogenase; Provisional	83.17
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	83.12
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	83.09
PRK12747	252	short chain dehydrogenase; Provisional	83.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	82.97
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	82.9
COG3268	382	Uncharacterized conserved protein [Function unknow	82.88
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	82.77
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	82.74
PLN02586	360	probable cinnamyl alcohol dehydrogenase	82.72
COG0057	335	GapA Glyceraldehyde-3-phosphate dehydrogenase/eryt	82.72
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	82.7
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	82.62
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	82.4
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	82.35
cd08252	336	AL_MDR Arginate lyase and other MDR family members	82.34
PLN02740	381	Alcohol dehydrogenase-like	82.32
PRK05599	246	hypothetical protein; Provisional	82.12
PRK08306	296	dipicolinate synthase subunit A; Reviewed	81.83
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	81.8
PRK06720	169	hypothetical protein; Provisional	81.76
PLN02775	286	Probable dihydrodipicolinate reductase	81.55
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	81.46
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	81.4
KOG2733	423	consensus Uncharacterized membrane protein [Functi	81.33
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	81.24
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	81.15
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	80.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	80.72
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	80.48
PTZ00354	334	alcohol dehydrogenase; Provisional	80.33
PLN02996	491	fatty acyl-CoA reductase	80.3
PLN02178	375	cinnamyl-alcohol dehydrogenase	80.2
PRK06545	359	prephenate dehydrogenase; Validated	80.16
PRK08309	177	short chain dehydrogenase; Provisional	80.07

>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Probab=100.00  E-value=3.4e-125  Score=944.18  Aligned_cols=310  Identities=81%  Similarity=1.243  Sum_probs=297.0

Q ss_pred             CCcCCceeecccccccccccceeEee-----cCCCCCCCCCccccccccCCCCCCeeEEEEecCChHhHHHHHHHHhCCC
Q 018600           27 PKLSGGFPLKRKDNATATFGRIVQCS-----AQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHED  101 (353)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~a~~~~~~~~~~~~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd  101 (353)
                      ++++|+...+|++. ....++|++|+     .+.|+++|||++..++..+.|+++|||+|||||||||+||||||++|||
T Consensus         4 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KkI~ILGSTGSIGtqtLdVI~~~pd   82 (454)
T PLN02696          4 PKLPGGFTTKRSSS-RQSRGRRAKCSVAGWSQNSPPPAWPGRAVVEPGRKGWDGPKPISLLGSTGSIGTQTLDIVAENPD   82 (454)
T ss_pred             ccCCCcceeccccc-cccccccccccccccccCCCCccCccccccCCcccccCCccEEEEecCCcHhhHHHHHHHHhCcc
Confidence            58899999999998 77888999999     4558999999998778889999999999999999999999999999999


Q ss_pred             ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccC
Q 018600          102 KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAG  181 (353)
Q Consensus       102 ~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aG  181 (353)
                      +|+|+||++|+|+++|++|+++|+|++|++.|++.+.+|++.|.+.+.+++++.|++|++++++++++|+||+||+|++|
T Consensus        83 ~f~vvaLaag~Ni~lL~~q~~~f~p~~v~v~d~~~~~~l~~~l~~~~~~~~vl~G~egl~~la~~~evDiVV~AIvG~aG  162 (454)
T PLN02696         83 KFKVVALAAGSNVTLLADQVRKFKPKLVAVRNESLVDELKEALADLDDKPEIIPGEEGIVEVARHPEAVTVVTGIVGCAG  162 (454)
T ss_pred             ccEEEEEECCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhcCCCCCcEEEECHHHHHHHHcCCCCCEEEEeCccccc
Confidence            99999999999999999999999999999999999999999885432358999999999999999999999999999999


Q ss_pred             cHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChh
Q 018600          182 LKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVE  261 (353)
Q Consensus       182 L~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e  261 (353)
                      |.||++||++||+|||||||||||||++|+++|+++|++|+|||||||||||||+|+++++|++|||||||||||||++|
T Consensus       163 L~pTl~AIkaGK~VALANKESLV~aG~lI~~~ak~~~~~IlPVDSEHsAIfQ~L~g~~~~~v~kiiLTASGGpFr~~~~e  242 (454)
T PLN02696        163 LKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHGVKILPADSEHSAIFQCIQGLPEGGLRRIILTASGGAFRDWPVE  242 (454)
T ss_pred             hHHHHHHHHCCCcEEEecHHHHHhhHHHHHHHHHHcCCeEeecchhhHHHHHHccCCCccCccEEEEECCchhccCCCHH
Confidence            99999999999999999999999999999999999999999999999999999999877789999999999999999999


Q ss_pred             hhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHhhhhcCCCCCceEEEEcCCcceEEEEEecCCceeeeee
Q 018600          262 KLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       262 ~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvIHPqSiIHsmVef~DGs~~~~~~  337 (353)
                      +|++||++|||+||||+||+||||||||||||||||||||||||+|||+|||||||||||||||||+|||+.+.|-
T Consensus       243 ~l~~vT~~~ALkHP~W~MG~KITIDSATmmNKglEvIEA~~LF~~~~d~I~vvIHPqSiIHsmVef~DGS~~Aql~  318 (454)
T PLN02696        243 KLKEVKVADALKHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGADYDDIDIVIHPQSIIHSMVETQDSSVLAQLG  318 (454)
T ss_pred             HHhCCCHHHHhhCCCCcCCCeeeeehHhhhhhhHHHHHHHHHcCCCHHHeEEEECcCCeeeEEEEEcCCcEEEEec
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999873

>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Probab=100.00  E-value=5.1e-119  Score=885.60  Aligned_cols=262  Identities=53%  Similarity=0.810  Sum_probs=253.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ||+|+|||||||||+|||||+++|||+|+|+||+||+|+++|.+|+++|+|++|++.|++.+.++++.+.+.+.+++|+.
T Consensus         1 Mk~i~IlGsTGSIG~qtL~Vi~~~~~~f~v~~Laa~~n~~~L~~q~~~f~p~~v~i~d~~~~~~l~~~l~~~~~~~~v~~   80 (389)
T TIGR00243         1 MKQIVILGSTGSIGKSTLDVVRHNPDHFQVVALSAGKNVALMVEQILEFRPKFVAIDDEASLKDLKTMLQQQGSRTEVLV   80 (389)
T ss_pred             CceEEEEecChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhcCCCCcEEEE
Confidence            58999999999999999999999999999999999999999999999999999999999999999988742234589999


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHHHhh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI  235 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~L  235 (353)
                      |++|++++++.+++|+||+||||++||.||++||++||+|||||||||||||++|++++++++++|+|||||||||||||
T Consensus        81 G~~~l~~l~~~~~~D~vv~AivG~aGL~pt~~Ai~~gk~iaLANKEsLV~aG~li~~~a~~~~~~I~PVDSEHsAIfQ~L  160 (389)
T TIGR00243        81 GEEGICEMAALEDVDQVMNAIVGAAGLLPTLAAIRAGKTIALANKESLVTAGHLFLDAVKKYGVQLLPVDSEHNAIFQSL  160 (389)
T ss_pred             CHHHHHHHHcCCCCCEEEEhhhcHhhHHHHHHHHHCCCcEEEechhHHHhhHHHHHHHHHHcCCeEEeecchHhHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-CCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHhhhhcCCCCCceEEE
Q 018600          236 Q-GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEII  314 (353)
Q Consensus       236 ~-g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~Ievv  314 (353)
                      + |++.++|++|||||||||||+||+++|++|||+|||+||||+||+||||||||||||||||||||||||+|||+||||
T Consensus       161 ~~g~~~~~v~kiiLTASGGpFr~~~~e~l~~vt~~~AL~HP~W~MG~KITIDSATmmNKglEvIEA~~LF~~~~d~I~vv  240 (389)
T TIGR00243       161 QHGLEELGVVSIILTASGGAFRDTPLEDLPTVTPQQALKHPNWSMGRKITIDSATMMNKGLEYIEARWLFGASAEQIDVL  240 (389)
T ss_pred             ccCCCcccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCCcCCCeeeeehHhhhhhhHHHHHHHHHcCCCHHHeEEE
Confidence            9 876678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCcceEEEEEecCCceeeeee
Q 018600          315 IHPQSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       315 IHPqSiIHsmVef~DGs~~~~~~  337 (353)
                      |||||||||||||+|||+.+.|-
T Consensus       241 IHpqSiIHsmVef~DGSv~aql~  263 (389)
T TIGR00243       241 IHPQSIIHSMVEFQDGSVIAQLG  263 (389)
T ss_pred             ECCCCceeEEEEEcCccEEEEeC
Confidence            99999999999999999999884

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.

>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]

Probab=100.00  E-value=1.1e-118  Score=876.25  Aligned_cols=257  Identities=56%  Similarity=0.875  Sum_probs=252.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ||||+|||||||||+|||||+++|||+|+|+||++|+|+++|.+||++|+|++|++.|+..+.+++..+.    +++|+.
T Consensus         1 ~k~i~iLGSTGSIG~qtLdVi~~~p~~f~vval~ag~n~~~l~~q~~~f~P~~v~~~d~~~~~~l~~~~~----~~~v~~   76 (385)
T COG0743           1 MKKLTILGSTGSIGTQTLDVIRRNPDKFEVVALAAGKNVELLAEQIREFKPKYVVIADESAAKELEDLLP----GTEVLV   76 (385)
T ss_pred             CceEEEEecCCchhHHHHHHHHhCCCcEEEEEEecCCcHHHHHHHHHHhCCceEEecChHHHHHHHhhcc----CceEEe
Confidence            6899999999999999999999999999999999999999999999999999999999999999998875    589999


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHHHhh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI  235 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~L  235 (353)
                      |++|++++++.+++|+||+||||++||.||++|+++||+|||||||||||||+++++.+|++|++|+|||||||||||||
T Consensus        77 G~~~l~e~a~~~~~d~Vm~AivG~aGL~pTlaAi~aGK~iaLANKEsLV~aG~l~~~~~k~~g~~llPVDSEH~AifQ~L  156 (385)
T COG0743          77 GEEGLCELAAEDDADVVMNAIVGAAGLLPTLAAIKAGKTIALANKESLVTAGELVMDAAKESGAQLLPVDSEHNAIFQCL  156 (385)
T ss_pred             cHHHHHHHHhcCCCCEEeehhhhhcccHHHHHHHHcCCceeecchhhhhcccHHHHHHHHHcCCEEeccCchhHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHhhhhcCCCCCceEEEE
Q 018600          236 QGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII  315 (353)
Q Consensus       236 ~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvI  315 (353)
                      +|+..++|++|||||||||||+|++++|.+|||+|||+||||+||+||||||||||||||||||||||||+|||+|||||
T Consensus       157 ~~~~~~~v~~iiLTASGGpFR~~~~~~L~~VT~eqAl~HPnWsMG~KITvDSATmmNKGLEvIEA~~LF~~~~~~IeVvI  236 (385)
T COG0743         157 QGETQKGVKKIILTASGGPFRDKSLEELANVTPEQALKHPNWSMGRKITVDSATMMNKGLEVIEAHWLFGLPYEQIEVVI  236 (385)
T ss_pred             CccccCcceEEEEecCCCCcCCCCHHHHccCCHHHHhcCCCCCCCCcccccHHHHhhhhHHHHHHHHHhCCCHHHeeEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcceEEEEEecCCceeeee
Q 018600          316 HPQSIIHSMVETQVLLYPVVM  336 (353)
Q Consensus       316 HPqSiIHsmVef~DGs~~~~~  336 (353)
                      ||||||||||||.|||+.+.|
T Consensus       237 HPQSiIHsmV~~~DGSviAql  257 (385)
T COG0743         237 HPQSIIHSMVEYVDGSVIAQL  257 (385)
T ss_pred             cccchheeeEEeccCCEEEec
Confidence            999999999999999999876

>PRK12464 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=100.00  E-value=2.2e-117  Score=872.92  Aligned_cols=255  Identities=50%  Similarity=0.811  Sum_probs=248.1

Q ss_pred             EEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEecHHHH
Q 018600           81 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGV  160 (353)
Q Consensus        81 ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G~~gl  160 (353)
                      |||||||||+|||||+++|||+|+|+||+||+|+++|.+|+++|+|++|++.|++.+.+|++.+.  +.+++|+.|++|+
T Consensus         1 ILGsTGSIG~qtLdVi~~~~d~f~v~~Laa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~l~--~~~~~v~~G~~~l   78 (383)
T PRK12464          1 ILGSTGSIGTSALDVVSAHPEHFKVVGLTANYNIELLEQQIKRFQPRIVSVADKELADTLRTRLS--ANTSKITYGTDGL   78 (383)
T ss_pred             CCccccHHHHHHHHHHHhCccccEEEEEECCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhcc--CCCcEEEECHHHH
Confidence            79999999999999999999999999999999999999999999999999999999999998774  3458999999999


Q ss_pred             HHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHHHhhcCCCC
Q 018600          161 IEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE  240 (353)
Q Consensus       161 ~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~L~g~~~  240 (353)
                      +++++.+++|+||+||||++||.||++||++||+|||||||||||||++|++++++++++|+|||||||||||||+|++.
T Consensus        79 ~~l~~~~~~D~vv~AivG~aGL~pt~~Ai~~gk~iaLANKESLV~aG~li~~~~~~~~~~iiPVDSEHsAIfQ~L~~~~~  158 (383)
T PRK12464         79 IAVATHPGSDLVLSSVVGAAGLLPTIEALKAKKDIALANKETLVAAGHIVTDLAKQNGCRLIPVDSEHSAIFQCLNGENN  158 (383)
T ss_pred             HHHHcCCCCCEEEEhhhcHhhHHHHHHHHHCCCcEEEechhhHhhhHHHHHHHHHHcCCeEEeechhHHHHHHHccCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             CCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHhhhhcCCCCCceEEEEcCCcc
Q 018600          241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSI  320 (353)
Q Consensus       241 ~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvIHPqSi  320 (353)
                      ++|++|||||||||||++|+++|++|||+|||+||||+||+||||||||||||||||||||||||+||||||||||||||
T Consensus       159 ~~v~kiiLTASGGpFr~~~~e~l~~vT~~~AL~HP~W~MG~KITIDSATmmNKglEvIEA~~LF~i~~d~I~vvIHPqSi  238 (383)
T PRK12464        159 KEIDKLIVTASGGAFRDKTREEMATLTAKDALKHPNWLMGAKLTIDSATLMNKGFEVIEAHWLFDIPYEKIDVLIHKESI  238 (383)
T ss_pred             ccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCCcCCCeeeeehHhhhhhhHHHHHHHHHcCCCHHHeEEEECCCCc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEEecCCceeeeee
Q 018600          321 IHSMVETQVLLYPVVML  337 (353)
Q Consensus       321 IHsmVef~DGs~~~~~~  337 (353)
                      |||||||+|||+.+.|-
T Consensus       239 VHsmVef~DGSv~aql~  255 (383)
T PRK12464        239 IHSLVEFIDGSVLAQLG  255 (383)
T ss_pred             eeEEEEEcCccEEEEeC
Confidence            99999999999999884

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=100.00  E-value=7.1e-108  Score=806.91  Aligned_cols=260  Identities=59%  Similarity=0.903  Sum_probs=253.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ||+|+|||||||||+|||||++++||+|+|+||+|++|+++|.+|+++|+|++|++.|++.+.+|++.+.+  .+++++.
T Consensus         1 mk~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~--~~~~v~~   78 (385)
T PRK05447          1 MKRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAA--AGIEVLA   78 (385)
T ss_pred             CceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhcc--CCceEEE
Confidence            58999999999999999999999999999999999999999999999999999999999999999988753  4578999


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHHHhh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI  235 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~L  235 (353)
                      |++|+.++++.+++|+||+||+|++||+||++||++||+|+|||||+|||||++|+++++++|++|+|||||||||||||
T Consensus        79 G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLANKEslV~aG~~i~~~a~~~g~~i~PVDSEh~ai~q~l  158 (385)
T PRK05447         79 GEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKSGAQILPVDSEHSAIFQCL  158 (385)
T ss_pred             ChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeCHHHHHhhHHHHHHHHHHcCCeEEEECHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHhhhhcCCCCCceEEEE
Q 018600          236 QGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII  315 (353)
Q Consensus       236 ~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvI  315 (353)
                      ++.+.++|++|+|||||||||+|++++|++|||+|||+||||+||+|||||||||||||||+||||||||+|||+|||||
T Consensus       159 ~~~~~~~i~~iilTASGGpFr~~~~~~l~~vt~~~al~HPnW~MG~kitiDSAtm~NKgle~IEA~~Lf~~~~~~I~vvI  238 (385)
T PRK05447        159 PGEKQEGVEKIILTASGGPFRDWPLEELANVTPEQALKHPNWSMGRKITIDSATMMNKGLEVIEAHWLFGLPYEQIEVVI  238 (385)
T ss_pred             cCCCccccceEEEecCCCcccCCCHHHHhcCCHHHHhcCCCCCCCCceeecHHHHhcchHHHHhHHHHcCCChhhEEEEE
Confidence            99877789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcceEEEEEecCCceeeeee
Q 018600          316 HPQSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       316 HPqSiIHsmVef~DGs~~~~~~  337 (353)
                      ||||||||||||+|||+.+.|-
T Consensus       239 HpqSivHsmVef~DGsv~aql~  260 (385)
T PRK05447        239 HPQSIIHSMVEYVDGSVLAQLG  260 (385)
T ss_pred             CCcCceeEEEEEeCCcEEEeeC
Confidence            9999999999999999999873

>PF08436 DXP_redisom_C: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; InterPro: IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=100.00  E-value=7.9e-58  Score=367.96  Aligned_cols=84  Identities=73%  Similarity=1.126  Sum_probs=77.9

Q ss_pred             EeecCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHh
Q 018600          221 ILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA  300 (353)
Q Consensus       221 IlPVDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA  300 (353)
                      |+|||||||||||||+|.+.++|++|||||||||||++++++|++||++|||+||||+||+|||||||||||||||||||
T Consensus         1 i~PvDSEHsAifQ~L~~~~~~~v~~i~lTASGGpFr~~~~~~l~~vt~~~al~HP~W~MG~KITiDSATm~NKglEviEA   80 (84)
T PF08436_consen    1 ILPVDSEHSAIFQCLQGEKREEVEKIILTASGGPFRDKPREELKNVTPEQALKHPNWSMGKKITIDSATMMNKGLEVIEA   80 (84)
T ss_dssp             EEE-SHHHHHHHHHSGHHHHCTEEEEEEEE--STTTTSHHHHHTT--HHHHTSSSSSCCHHHHHHHHHTTHHHHHHHHHH
T ss_pred             CcccccHHHHHHHHCCCCCccccCEEEEECcchhhCCCCHHHHcCCCHHHHhhCCCCcCCCeeeechHHHHHHhHHHHHH
Confidence            79999999999999999988899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhc
Q 018600          301 HYLF  304 (353)
Q Consensus       301 ~~LF  304 (353)
                      ||||
T Consensus        81 ~~LF   84 (84)
T PF08436_consen   81 HWLF   84 (84)
T ss_dssp             HHHH
T ss_pred             HhhC
Confidence            9999

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found to the C terminus of IPR013512 from INTERPRO domains in bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0005515 protein binding; PDB: 3AUA_A 3AU9_B 3AU8_B 3A14_A 3A06_A 2Y1D_B 4AIC_A 2JD0_B 2Y1C_B 2JD1_A ....

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=100.00  E-value=2.8e-48  Score=334.53  Aligned_cols=129  Identities=57%  Similarity=0.852  Sum_probs=119.1

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEecHH
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQ  158 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G~~  158 (353)
                      |+|||||||||+|||||+++|||+|+|+||+||+|+++|.+|+++|+|++|++.|++.++.|++.+...+.+++++.|++
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            78999999999999999999999999999999999999999999999999999999999999998865567899999999


Q ss_pred             HHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecc
Q 018600          159 GVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG  207 (353)
Q Consensus       159 gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG  207 (353)
                      |++++++++++|+||+||+|++||+||++||++||+|||||||||||||
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLANKEsLV~aG  129 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALANKESLVCAG  129 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE--SHHHHHHH
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEechhhhhcCC
Confidence            9999999899999999999999999999999999999999999999998

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06349 homoserine dehydrogenase; Provisional

Probab=98.38  E-value=1.9e-06  Score=86.76  Aligned_cols=159  Identities=21%  Similarity=0.337  Sum_probs=104.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC--------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHED--------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV  147 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd--------~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~  147 (353)
                      +-+|+|+| +|.||+..++++.++++        +++|++++.. |.++.    +.+....                   
T Consensus         3 ~i~VgiiG-~G~VG~~~~~~L~~~~~~l~~~~g~~i~l~~V~~~-~~~~~----~~~~~~~-------------------   57 (426)
T PRK06349          3 PLKVGLLG-LGTVGSGVVRILEENAEEIAARAGRPIEIKKVAVR-DLEKD----RGVDLPG-------------------   57 (426)
T ss_pred             eEEEEEEe-eCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEeC-Chhhc----cCCCCcc-------------------
Confidence            45899999 79999999999988753        6899998754 43321    1111100                   


Q ss_pred             CCCcEEEecHHHHHHHhcCCCCcEEEEeccCc-cCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe----
Q 018600          148 EEKPEILAGEQGVIEAARHPDAVTVVTGIVGC-AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL----  222 (353)
Q Consensus       148 ~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~-aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il----  222 (353)
                         ..+.   +...+++..+++|+|+.++.|. .+..-+.+|+++||.|..+||.-+..-|+-+.++|+++|+.+.    
T Consensus        58 ---~~~~---~d~~~ll~d~~iDvVve~tg~~~~~~~~~~~aL~~GkhVVtaNK~~~a~~~~eL~~lA~~~gv~l~fEas  131 (426)
T PRK06349         58 ---ILLT---TDPEELVNDPDIDIVVELMGGIEPARELILKALEAGKHVVTANKALLAVHGAELFAAAEEKGVDLYFEAA  131 (426)
T ss_pred             ---ccee---CCHHHHhhCCCCCEEEECCCCchHHHHHHHHHHHCCCeEEEcCHHHHHHHHHHHHHHHHHcCCcEEEEEE
Confidence               0111   1245667778999999998663 3455567999999999999998888889999999999998776    


Q ss_pred             -----ecCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhh--hcCCHHHHhc
Q 018600          223 -----PADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKL--KEVKVADALK  273 (353)
Q Consensus       223 -----PVDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l--~~vT~~~ALk  273 (353)
                           |+   +..+-++|.+.   .|.+|.=-=+|=  -++=+.+|  +..+.+|||+
T Consensus       132 V~ggiPi---i~~l~~~l~~~---~I~~I~GIlnGT--~nyIl~~m~~~g~~f~~al~  181 (426)
T PRK06349        132 VAGGIPI---IKALREGLAAN---RITRVMGIVNGT--TNYILTKMTEEGLSFEDALK  181 (426)
T ss_pred             eeccCch---HHHHHhhcccC---CeeEEEEEEeCc--HHHHHhhhhhcCCCHHHHHH
Confidence                 32   34455555554   455543111111  01114455  4677777774

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=98.16  E-value=5e-07  Score=74.33  Aligned_cols=109  Identities=24%  Similarity=0.320  Sum_probs=73.1

Q ss_pred             CChHhHHHHHHHHhCCC--ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEecHHHHHH
Q 018600           85 TGSIGTQTLDIVAEHED--KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIE  162 (353)
Q Consensus        85 TGSIGtqTLdVI~~~pd--~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G~~gl~~  162 (353)
                      .|.||++.++.+.+.++  +|+|++++..+  ..+....                   .....+    ..+...   +.+
T Consensus         2 ~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~--~~~~~~~-------------------~~~~~~----~~~~~~---~~~   53 (117)
T PF03447_consen    2 FGNVGRGLLEQLKEQQERIDLEVVGVADRS--MLISKDW-------------------AASFPD----EAFTTD---LEE   53 (117)
T ss_dssp             -SHHHHHHHHHHHHTHHHCEEEEEEEEESS--EEEETTH-------------------HHHHTH----SCEESS---HHH
T ss_pred             CCHHHHHHHHHHHhCcccCCEEEEEEEECC--chhhhhh-------------------hhhccc----ccccCC---HHH
Confidence            69999999999999875  69999988665  2111111                   111110    122222   334


Q ss_pred             HhcCCCCcEEEEeccCccCcHH-HHHHHHcCCcEeeeccccee--ecccchhHHhhhcCCeEe
Q 018600          163 AARHPDAVTVVTGIVGCAGLKP-TVAAIEAGKDIALANKETLI--AGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       163 ~a~~~~~D~Vv~AIvG~aGL~p-T~~Ai~~gK~IaLANKESLV--~aG~li~~~a~~~~~~Il  222 (353)
                      +....++|+||.+ .|...+.. ...++++|+.|..+||+.+.  .-++-|.++|+++|++++
T Consensus        54 ~~~~~~~dvvVE~-t~~~~~~~~~~~~L~~G~~VVt~nk~ala~~~~~~~L~~~A~~~g~~~~  115 (117)
T PF03447_consen   54 LIDDPDIDVVVEC-TSSEAVAEYYEKALERGKHVVTANKGALADEALYEELREAARKNGVRIY  115 (117)
T ss_dssp             HHTHTT-SEEEE--SSCHHHHHHHHHHHHTTCEEEES-HHHHHSHHHHHHHHHHHHHHT-EEE
T ss_pred             HhcCcCCCEEEEC-CCchHHHHHHHHHHHCCCeEEEECHHHhhhHHHHHHHHHHHHHcCCEEE
Confidence            4444479999999 55544443 67899999999999999999  889999999999998874

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>PRK06270 homoserine dehydrogenase; Provisional

Probab=97.95  E-value=5.1e-05  Score=74.38  Aligned_cols=169  Identities=22%  Similarity=0.287  Sum_probs=107.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC--------CceEEEEEeecC---------CHHHHHHHHHhhCCCEEEEeCccchHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE--------DKFRVVALAAGS---------NITLLADQVKRFKPQVVAVRNESLLDE  139 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p--------d~F~VvaLaags---------Nv~lL~~Q~~eFkPk~V~i~de~~~~~  139 (353)
                      .+|+|+|. |-||+..++.+++++        .+++|+|++-.+         |.+.+.+..+++..             
T Consensus         3 i~V~IiG~-G~VG~~~~~~L~~~~~~~~~~~g~~~~vvai~d~~~~~~~~~Gi~~~~~~~~~~~~~~-------------   68 (341)
T PRK06270          3 MKIALIGF-GGVGQGVAELLAEKREYLKKRYGLDLKVVAIADSSGSAIDPDGLDLELALKVKEETGK-------------   68 (341)
T ss_pred             EEEEEECC-CHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCCcccCcCCCCHHHHHHHHhccCC-------------
Confidence            47999995 999999999998764        269999987532         33333333332210             


Q ss_pred             HHHHhhcCCCCcEEEe---cHHHHHHHhcCCCCcEEEEeccCc-----cCcHHHHHHHHcCCcEeeecccceeecccchh
Q 018600          140 IKEALANVEEKPEILA---GEQGVIEAARHPDAVTVVTGIVGC-----AGLKPTVAAIEAGKDIALANKETLIAGGPFVL  211 (353)
Q Consensus       140 l~~~l~~~~~~~~v~~---G~~gl~~~a~~~~~D~Vv~AIvG~-----aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~  211 (353)
                                 ...+.   ....+.++...+++|+||.+..-.     .+..-...|+++||.|..+||.-+-.-++-+.
T Consensus        69 -----------~~~~~~~~~~~d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~  137 (341)
T PRK06270         69 -----------LADYPEGGGEISGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELK  137 (341)
T ss_pred             -----------cccCccccccCCHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHH
Confidence                       00000   112455666677899999987532     23566789999999999999988877788889


Q ss_pred             HHhhhcCCeEeecCC---chhHHHHhhcC-CCCCCcceEEEEecCCcCCCCChhhh--hcCCHHHHhc
Q 018600          212 PLAHKHNIKILPADS---EHSAIFQCIQG-LPEGALRRIILTASGGAFRDWPVEKL--KEVKVADALK  273 (353)
Q Consensus       212 ~~a~~~~~~IlPVDS---EHsAIfQ~L~g-~~~~~v~kIiLTASGGPFr~~~~e~l--~~vT~~~ALk  273 (353)
                      ++|++++..+.- ..   -+.-++|.|+. ...+.|.+|.=-=||=-  ++=+.+|  +..+.+|||+
T Consensus       138 ~~A~~~g~~~~~-ea~v~~glPii~~l~~~l~g~~I~~I~GIlnGT~--nyIl~~m~~~g~~f~~al~  202 (341)
T PRK06270        138 ELAKKNGVRFRY-EATVGGAMPIINLAKETLAGNDIKSIKGILNGTT--NYILTRMEEEGLSYEQALA  202 (341)
T ss_pred             HHHHHcCCEEEE-eeeeeechhHHHHHHhhcccCceEEEEEEEeCcH--HHHHHHHhhcCCCHHHHHH
Confidence            999999987761 00   13335555532 22234555432222211  1224455  5788888886

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=97.94  E-value=8.1e-05  Score=70.51  Aligned_cols=145  Identities=17%  Similarity=0.170  Sum_probs=104.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      |.||+|+|. |.||+..++.+.++|+ ++++++.... +.+...+.   +..                       ++.++
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~-~~l~~v~~~~~~~~~~~~~---~~~-----------------------~~~~~   52 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPD-LRVDWVIVPEHSIDAVRRA---LGE-----------------------AVRVV   52 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCC-ceEEEEEEcCCCHHHHhhh---hcc-----------------------CCeee
Confidence            468999999 9999999999998875 8888877432 22222111   110                       12222


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeec--ccchhHHhhhcCCeEeecCCchhHHH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKILPADSEHSAIF  232 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~a--G~li~~~a~~~~~~IlPVDSEHsAIf  232 (353)
                      ..   +.++  ..++|+|+.+..-.+-..-...++++||.+...+...+--.  ++.+.+.|+++|.+++. +|-.-...
T Consensus        53 ~d---~~~l--~~~~DvVve~t~~~~~~e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~v-~sga~gg~  126 (265)
T PRK13303         53 SS---VDAL--PQRPDLVVECAGHAALKEHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHL-LSGAIGGI  126 (265)
T ss_pred             CC---HHHh--ccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEEE-eChHhhCH
Confidence            22   3344  46799999997776666778999999999999998877533  67788899999987665 77777777


Q ss_pred             HhhcCCCCCCcceEEEEecCCc
Q 018600          233 QCIQGLPEGALRRIILTASGGA  254 (353)
Q Consensus       233 Q~L~g~~~~~v~kIiLTASGGP  254 (353)
                      ++|+-.+...++.+.+|.-.-|
T Consensus       127 d~l~~~~~g~~~~v~~~~~k~p  148 (265)
T PRK13303        127 DALAAAKEGGLDEVTYTGRKPP  148 (265)
T ss_pred             HHHHHHHhCCceEEEEEEecCh
Confidence            7777556667899999865555

>PRK11579 putative oxidoreductase; Provisional

Probab=97.92  E-value=0.0032  Score=60.91  Aligned_cols=203  Identities=15%  Similarity=0.186  Sum_probs=129.1

Q ss_pred             eeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -||+|+|. |.||.. .+..+++.|+ ++|+|++. .|.++..   .+|..                        ++++ 
T Consensus         5 irvgiiG~-G~i~~~~~~~~~~~~~~-~~l~av~d-~~~~~~~---~~~~~------------------------~~~~-   53 (346)
T PRK11579          5 IRVGLIGY-GYASKTFHAPLIAGTPG-LELAAVSS-SDATKVK---ADWPT------------------------VTVV-   53 (346)
T ss_pred             ceEEEECC-CHHHHHHHHHHHhhCCC-CEEEEEEC-CCHHHHH---hhCCC------------------------Ccee-
Confidence            48999995 999984 6788888775 99999864 5655432   22210                        1121 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeec--ccchhHHhhhcCCeEeec-----CCch
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKILPA-----DSEH  228 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~a--G~li~~~a~~~~~~IlPV-----DSEH  228 (353)
                        +.+.++.+.+++|.|+.+..=..-..-+..|+++||.|.. .|-.-...  ..-+.++|+++|..+...     |..+
T Consensus        54 --~~~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~-EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~  130 (346)
T PRK11579         54 --SEPQHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVV-DKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDF  130 (346)
T ss_pred             --CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEE-eCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHH
Confidence              2345666778899999998877888889999999999874 66643333  355677888888776543     5566


Q ss_pred             hHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCC
Q 018600          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (353)
Q Consensus       229 sAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (353)
                      ..+-|.++.....+|..+  .+.-+-++..              ..++|..-+.  -..+.|++-|--.|- ++||||- 
T Consensus       131 ~~~k~~i~~g~iG~i~~~--~~~~~~~~~~--------------~~~~w~~~~~--~ggG~l~d~g~H~id~~~~l~G~-  191 (346)
T PRK11579        131 LTLKALLAEGVLGEVAYF--ESHFDRFRPQ--------------VRQRWREQGG--PGSGIWYDLAPHLLDQAIQLFGL-  191 (346)
T ss_pred             HHHHHHHhcCCCCCeEEE--EEEecccCCC--------------CccccccCCC--CCCcchhhhhhhHHHHHHHHhCC-
Confidence            677777765444445433  3332222210              1245653211  135678888855553 5899996 


Q ss_pred             CCceEEEE---cC----CcceEEEEEecCCce
Q 018600          308 YDNIEIII---HP----QSIIHSMVETQVLLY  332 (353)
Q Consensus       308 ~d~IevvI---HP----qSiIHsmVef~DGs~  332 (353)
                      +.++....   +|    +-..+.+++|.||..
T Consensus       192 ~~~v~a~~~~~~~~~~~~D~~~~~l~f~~g~~  223 (346)
T PRK11579        192 PVSITVDLAQLRPGAQSTDYFHAILSYPQRRV  223 (346)
T ss_pred             CeEEEEEeeeecCCCCCCceEEEEEEECCeEE
Confidence            44555433   23    336688889998865

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=97.90  E-value=0.00018  Score=68.62  Aligned_cols=143  Identities=15%  Similarity=0.166  Sum_probs=99.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .+.||+|+|. |.||+.-.+-+.+....++|+++. .++.+...+++.++....+                        +
T Consensus         5 ~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~-dr~~~~a~~~a~~~g~~~~------------------------~   58 (271)
T PRK13302          5 PELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVA-VRDPQRHADFIWGLRRPPP------------------------V   58 (271)
T ss_pred             CeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEE-CCCHHHHHHHHHhcCCCcc------------------------c
Confidence            3578999995 999999888887642458998875 4577777777766652111                        0


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeE-eecCCchhHHHH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKI-LPADSEHSAIFQ  233 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~I-lPVDSEHsAIfQ  233 (353)
                         +.+.+++.  ++|.|+.+..-.+=-.-...++++||.+...+-.++.- -.-+.+.|+++|.++ +|  |=...-|+
T Consensus        59 ---~~~eell~--~~D~Vvi~tp~~~h~e~~~~aL~aGk~Vi~~s~gal~~-~~~L~~~A~~~g~~l~v~--sGa~~g~d  130 (271)
T PRK13302         59 ---VPLDQLAT--HADIVVEAAPASVLRAIVEPVLAAGKKAIVLSVGALLR-NEDLIDLARQNGGQIIVP--TGALLGLD  130 (271)
T ss_pred             ---CCHHHHhc--CCCEEEECCCcHHHHHHHHHHHHcCCcEEEecchhHHh-HHHHHHHHHHcCCEEEEc--chHHHhHH
Confidence               12234443  47999998766555555688999999987654333321 255677889999887 56  67777788


Q ss_pred             hhcCCCCCCcceEEEEec
Q 018600          234 CIQGLPEGALRRIILTAS  251 (353)
Q Consensus       234 ~L~g~~~~~v~kIiLTAS  251 (353)
                      +|+......++.+.+|.-
T Consensus       131 ~l~~g~iG~~~~v~~~tr  148 (271)
T PRK13302        131 AVTAAAEGTIHSVKMITR  148 (271)
T ss_pred             HHHHHHcCCceEEEEEEe
Confidence            887656677888988875

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=97.86  E-value=0.0024  Score=60.09  Aligned_cols=214  Identities=17%  Similarity=0.205  Sum_probs=145.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .+.||+|+|+.|..++.-+..+++.++.++++|+. .+|-+++.+.+++|....++                        
T Consensus         2 ~~irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~-d~~~~~a~~~a~~~~~~~~~------------------------   56 (342)
T COG0673           2 KMIRVGIIGAGGIAGKAHLPALAALGGGLELVAVV-DRDPERAEAFAEEFGIAKAY------------------------   56 (342)
T ss_pred             CeeEEEEEcccHHHHHHhHHHHHhCCCceEEEEEe-cCCHHHHHHHHHHcCCCccc------------------------
Confidence            46799999999888888999999987668888865 56899999999999865211                        


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee------ecccceeecccchhHHhhhcCCeEee-----
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL------ANKETLIAGGPFVLPLAHKHNIKILP-----  223 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL------ANKESLV~aG~li~~~a~~~~~~IlP-----  223 (353)
                         +.+.++.+.+++|.|+.+..=..=...+++|+++||.|..      -=.|     ..-+.++|++++..+.-     
T Consensus        57 ---~~~~~ll~~~~iD~V~Iatp~~~H~e~~~~AL~aGkhVl~EKPla~t~~e-----a~~l~~~a~~~~~~l~v~~~~R  128 (342)
T COG0673          57 ---TDLEELLADPDIDAVYIATPNALHAELALAALEAGKHVLCEKPLALTLEE-----AEELVELARKAGVKLMVGFNRR  128 (342)
T ss_pred             ---CCHHHHhcCCCCCEEEEcCCChhhHHHHHHHHhcCCEEEEcCCCCCCHHH-----HHHHHHHHHHcCCceeeehhhh
Confidence               1335566777899999999999999999999999997653      1122     23456778887654432     


Q ss_pred             cCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhh
Q 018600          224 ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHY  302 (353)
Q Consensus       224 VDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~  302 (353)
                      =|.-+.++-++|.......|..+..+.......              .-..+.|.+..+-.=  +.++..|.-.|- ++|
T Consensus       129 f~p~~~~~k~li~~g~lG~v~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~g--G~l~d~giH~lD~~~~  192 (342)
T COG0673         129 FDPAVQALKELIDSGALGEVVSVQASFSRDRPN--------------PPPPPWWRFDRADGG--GALLDLGIHDLDLLRF  192 (342)
T ss_pred             cCHHHHHHHHHHhcCCcCceEEEEEEeeccccc--------------cCCccceecccccCC--CchhhhHHHHHHHHHH
Confidence            244555666666554555666666554443321              122344544433222  467777776554 689


Q ss_pred             hcCC-CCCceEEEEcCC--------cceEEEEEecCCceeeeee
Q 018600          303 LFGA-EYDNIEIIIHPQ--------SIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       303 LF~i-~~d~IevvIHPq--------SiIHsmVef~DGs~~~~~~  337 (353)
                      |||- +.....+..+.+        -..+.+.+|.||.+.....
T Consensus       193 l~G~~~~~~v~a~~~~~~~~~~~~~d~~~~~l~~~~g~~~~~~~  236 (342)
T COG0673         193 LLGSPEPVSVSAKARNSPPGEAGVDDSASAILRFENGVLAVSWA  236 (342)
T ss_pred             HcCCcchhheeeecccCCCCcccccceEEEEEEecCCceEEEEE
Confidence            9998 577777777633        4578888998866655543

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=97.78  E-value=0.00036  Score=56.41  Aligned_cols=90  Identities=20%  Similarity=0.306  Sum_probs=72.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEecH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGE  157 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G~  157 (353)
                      ||+|+|. |++|+.-+.-+.+.+++++|+|+. ..+-+...+.+++|+.+  ...                         
T Consensus         2 ~v~iiG~-G~~g~~~~~~~~~~~~~~~v~~v~-d~~~~~~~~~~~~~~~~--~~~-------------------------   52 (120)
T PF01408_consen    2 RVGIIGA-GSIGRRHLRALLRSSPDFEVVAVC-DPDPERAEAFAEKYGIP--VYT-------------------------   52 (120)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTTTEEEEEEE-CSSHHHHHHHHHHTTSE--EES-------------------------
T ss_pred             EEEEECC-cHHHHHHHHHHHhcCCCcEEEEEE-eCCHHHHHHHHHHhccc--chh-------------------------
Confidence            7999998 999999999999888889999985 55777777777777655  221                         


Q ss_pred             HHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          158 QGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       158 ~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                       .+.++.+.+++|.|+.+..--.-...+..++++||.|.+
T Consensus        53 -~~~~ll~~~~~D~V~I~tp~~~h~~~~~~~l~~g~~v~~   91 (120)
T PF01408_consen   53 -DLEELLADEDVDAVIIATPPSSHAEIAKKALEAGKHVLV   91 (120)
T ss_dssp             -SHHHHHHHTTESEEEEESSGGGHHHHHHHHHHTTSEEEE
T ss_pred             -HHHHHHHhhcCCEEEEecCCcchHHHHHHHHHcCCEEEE
Confidence             134555656899999999999999999999999997765

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK08374 homoserine dehydrogenase; Provisional

Probab=97.67  E-value=0.00028  Score=69.32  Aligned_cols=126  Identities=21%  Similarity=0.242  Sum_probs=85.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC--------CceEEEEEeecC---------CHHHHHHHHHhhCCCEEEEeCccchHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE--------DKFRVVALAAGS---------NITLLADQVKRFKPQVVAVRNESLLDE  139 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p--------d~F~VvaLaags---------Nv~lL~~Q~~eFkPk~V~i~de~~~~~  139 (353)
                      -+|+|+| .|.||+.+++++.++.        -+++|++++-.+         +++.+.+..+++..-. .+.+      
T Consensus         3 i~VaIiG-~GnVG~~~~~~L~~~~~~l~~~~G~~l~VvaV~ds~~~~~~~~Gid~~~l~~~~~~~~~~~-~~~~------   74 (336)
T PRK08374          3 VKVSIFG-FGNVGRAVAEVLAEKSRVFKERYGVELKVVSITDTSGTIWLPEDIDLREAKEVKENFGKLS-NWGN------   74 (336)
T ss_pred             eEEEEEC-CCHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCccccCCCCCChHHHHHhhhccCchh-hccc------
Confidence            4799999 7999999999998743        358899987432         2222222222221100 0000      


Q ss_pred             HHHHhhcCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCC
Q 018600          140 IKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNI  219 (353)
Q Consensus       140 l~~~l~~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~  219 (353)
                              +...+    .-...++....++|+||+.+.+-..-.-...++++||.|-.|||..+-.-++-+.++|++++.
T Consensus        75 --------~~~~~----~~~~~ell~~~~~DVvVd~t~~~~a~~~~~~al~~G~~VVtanK~~la~~~~el~~la~~~~~  142 (336)
T PRK08374         75 --------DYEVY----NFSPEEIVEEIDADIVVDVTNDKNAHEWHLEALKEGKSVVTSNKPPIAFHYDELLDLANERNL  142 (336)
T ss_pred             --------ccccc----CCCHHHHHhcCCCCEEEECCCcHHHHHHHHHHHhhCCcEEECCHHHHHhCHHHHHHHHHHcCC
Confidence                    00000    003456666568999999997766666677899999999999999888888889999999998


Q ss_pred             eEe
Q 018600          220 KIL  222 (353)
Q Consensus       220 ~Il  222 (353)
                      +++
T Consensus       143 ~~~  145 (336)
T PRK08374        143 PYL  145 (336)
T ss_pred             eEE
Confidence            876

>PRK06813 homoserine dehydrogenase; Validated

Probab=97.62  E-value=0.00011  Score=73.14  Aligned_cols=129  Identities=17%  Similarity=0.176  Sum_probs=80.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC--------CceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE--------DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p--------d~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      -+|+|+| .|.||+..++++.++.        -+++|++++. ++..++.+-  -+.++. .+........+.+.+.   
T Consensus         3 i~I~liG-~G~VG~~~~~~L~~~~~~l~~~~g~~l~v~~i~~-~~~~~~~~~--gi~~~~-~l~~~~~~~~~~~~~~---   74 (346)
T PRK06813          3 IKVVLSG-YGTVGREFIKLLNEKYLYINETYGIDLVVSGVLG-RNVAIHNED--GLSIHH-LLRYGGGSCAIEKYIE---   74 (346)
T ss_pred             eEEEEEe-cChhHHHHHHHHHHhHHHHHHhcCCcEEEEEEEe-cchhhcccc--CCChhh-hhhccccccchhhhhc---
Confidence            4799999 8999999999997654        3588998864 343332210  011000 0000000000011110   


Q ss_pred             CCcEEEecHHHHHHHh-cCCCCcEEEEec----cC-ccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe
Q 018600          149 EKPEILAGEQGVIEAA-RHPDAVTVVTGI----VG-CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~a-~~~~~D~Vv~AI----vG-~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il  222 (353)
                             .  -..++. ...+.|+||...    .| -.+.....+|+++||.|--|||.-+-.-++-++++|+++++.++
T Consensus        75 -------~--~~~~~~~~~~~~dVvVe~T~s~~~~~e~a~~~~~~aL~~G~hVVTANK~~la~~~~eL~~lA~~~g~~~~  145 (346)
T PRK06813         75 -------H--HPEERATDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKKMDIVAISKGALVTNWREINEAAKIANVRIR  145 (346)
T ss_pred             -------c--ChHHHhcCCCCCCEEEECCCCccCCchHHHHHHHHHHHCCCeEEcCCcHHHhccHHHHHHHHHHcCCeEE
Confidence                   0  001222 233689999984    22 44555667899999999999999999999999999999998774

>PRK06392 homoserine dehydrogenase; Provisional

Probab=97.56  E-value=0.00063  Score=67.08  Aligned_cols=169  Identities=18%  Similarity=0.181  Sum_probs=100.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhC------CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           78 PISVLGSTGSIGTQTLDIVAEH------EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~------pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      ||+|+| -|.||+.+++++.+.      ...++|++++..+ -.+       ++|+-+      ..+++.+.... + ..
T Consensus         2 rVaIiG-fG~VG~~va~~L~~~~~~~~~g~~l~VVaVsds~-g~l-------~~~~Gl------dl~~l~~~~~~-g-~l   64 (326)
T PRK06392          2 RISIIG-LGNVGLNVLRIIKSRNDDRRNNNGISVVSVSDSK-LSY-------YNERGL------DIGKIISYKEK-G-RL   64 (326)
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCHHhHhcCCCeEEEEEEECC-Ccc-------cCCcCC------ChHHHHHHHhc-C-cc
Confidence            699999 699999999999874      3578999987543 111       111110      01111111110 0 00


Q ss_pred             EEEecHH--HHHHHhcCCCCcEEEEeccCc-c---CcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe---
Q 018600          152 EILAGEQ--GVIEAARHPDAVTVVTGIVGC-A---GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL---  222 (353)
Q Consensus       152 ~v~~G~~--gl~~~a~~~~~D~Vv~AIvG~-a---GL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il---  222 (353)
                      .-+ ..+  .+.++.. .++|+||.+..+. .   +..-...|+++||.|..|||--|...++-++++|+++++++.   
T Consensus        65 ~~~-~~~~~~~~~ll~-~~~DVvVE~t~~~~~g~~~~~~~~~aL~~G~hVVTaNKgalA~~~~eL~~lA~~~g~~~~~ea  142 (326)
T PRK06392         65 EEI-DYEKIKFDEIFE-IKPDVIVDVTPASKDGIREKNLYINAFEHGIDVVTANKSGLANHWHDIMDSASKNRRIIRYEA  142 (326)
T ss_pred             ccC-CCCcCCHHHHhc-CCCCEEEECCCCCCcCchHHHHHHHHHHCCCEEEcCCHHHHHhhHHHHHHHHHHcCCeEEEee
Confidence            000 001  2344443 5899999998643 2   445557899999999999999998888999999999988774   


Q ss_pred             ------ecCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhh-hcCCHHHHhc
Q 018600          223 ------PADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKL-KEVKVADALK  273 (353)
Q Consensus       223 ------PVDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l-~~vT~~~ALk  273 (353)
                            ||=+   .+-.+|.|.+...|+.|+   ||=  -++=+++| +..+.+|||+
T Consensus       143 tV~~g~Pii~---~~~~~~~g~~i~~i~Gil---nGT--~nyIl~~m~~g~~f~~al~  192 (326)
T PRK06392        143 TVAGGVPLFS---LRDYSTLPSRIKNFRGIV---SST--INYVIRQEANGRGFLDVVK  192 (326)
T ss_pred             eeeeccchhh---hhhhhcccCCEEEEEEEE---eCh--HHHHHhhccCCCCHHHHHH
Confidence                  6533   443345565433343332   211  00112233 5777777775

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.53  E-value=0.0011  Score=67.27  Aligned_cols=216  Identities=20%  Similarity=0.207  Sum_probs=136.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEe-CccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR-NESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~-de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      |++|.|+|| |-||+.+..-+.++-| ++|..  |.++.+++.+......++.=++. |.                    
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~i--AdRs~~~~~~i~~~~~~~v~~~~vD~--------------------   56 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTI--ADRSKEKCARIAELIGGKVEALQVDA--------------------   56 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCC-ceEEE--EeCCHHHHHHHHhhccccceeEEecc--------------------
Confidence            578999999 9999999999999877 88865  45677777776665544221111 11                    


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc-EeeecccceeecccchhHHhhhcCCeEee---cCCchhH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD-IALANKETLIAGGPFVLPLAHKHNIKILP---ADSEHSA  230 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~-IaLANKESLV~aG~li~~~a~~~~~~IlP---VDSEHsA  230 (353)
                      .+.+++.++.+.  .|+|++++.++-++.-.-+|+++|.+ |=++|.|--.   +.+.+.|++.|+.++|   +|-=-+-
T Consensus        57 ~d~~al~~li~~--~d~VIn~~p~~~~~~i~ka~i~~gv~yvDts~~~~~~---~~~~~~a~~Agit~v~~~G~dPGi~n  131 (389)
T COG1748          57 ADVDALVALIKD--FDLVINAAPPFVDLTILKACIKTGVDYVDTSYYEEPP---WKLDEEAKKAGITAVLGCGFDPGITN  131 (389)
T ss_pred             cChHHHHHHHhc--CCEEEEeCCchhhHHHHHHHHHhCCCEEEcccCCchh---hhhhHHHHHcCeEEEcccCcCcchHH
Confidence            134566777654  59999999999999999999999988 6688888772   6678889999988887   3332222


Q ss_pred             HHHhh--cCCCCCCcceEEEEecCCcCCC-CChhhhhcCCHHH---HhcCC--CCCCCCccceecccccchhHHHHHhhh
Q 018600          231 IFQCI--QGLPEGALRRIILTASGGAFRD-WPVEKLKEVKVAD---ALKHP--NWSMGKKITVDSATLFNKGLEVIEAHY  302 (353)
Q Consensus       231 IfQ~L--~g~~~~~v~kIiLTASGGPFr~-~~~e~l~~vT~~~---ALkHP--nW~MG~KITIDSATmmNKgLEvIEA~~  302 (353)
                      +|---  +... ++++.|-+=-=|+|=+. -|+.-=-+-.++.   .+.-|  -|.-|+-++||+       ||..| -+
T Consensus       132 v~a~~a~~~~~-~~i~si~iy~g~~g~~~~~~l~ya~tws~e~~l~e~~~p~~~~~~Gk~~~v~~-------~~~~~-~~  202 (389)
T COG1748         132 VLAAYAAKELF-DEIESIDIYVGGLGEHGDNPLGYATTWSPEINLREYTRPARYWENGKWVEVDP-------LEERE-VF  202 (389)
T ss_pred             HHHHHHHHHhh-ccccEEEEEEecCCCCCCCCccceeeecHHHhHHHhcCceEEEeCCEEEEecC-------ccccc-cc
Confidence            22111  1111 15777766666666554 1111111222332   23344  377888888876       45555 22


Q ss_pred             hcCC-CCCceEEEEcCCcceEEEEEecCCc
Q 018600          303 LFGA-EYDNIEIIIHPQSIIHSMVETQVLL  331 (353)
Q Consensus       303 LF~i-~~d~IevvIHPqSiIHsmVef~DGs  331 (353)
                      -|.. .+-+....-|++  .|+++++.+|.
T Consensus       203 ~~~~~G~~~~y~~~~~e--l~sL~~~i~~~  230 (389)
T COG1748         203 EFPVIGYGDVYAFYHDE--LRSLVKTIPGV  230 (389)
T ss_pred             ccCCCCceeEEecCCcc--HHHHHHhCccc
Confidence            2222 233334444444  57888888765

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=97.49  E-value=0.0024  Score=60.55  Aligned_cols=145  Identities=18%  Similarity=0.148  Sum_probs=95.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .||+|+| .|.||+....-+.+.+..++++++. .+|.+...+.++++.++                         ++  
T Consensus         2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~-d~~~~~a~~~a~~~~~~-------------------------~~--   52 (265)
T PRK13304          2 LKIGIVG-CGAIASLITKAILSGRINAELYAFY-DRNLEKAENLASKTGAK-------------------------AC--   52 (265)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEE-CCCHHHHHHHHHhcCCe-------------------------eE--
Confidence            5799999 5999999888888764369998875 56666665555544321                         11  


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceee--cccchhHHhhhcCCeEeecCCchhHHHHh
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIA--GGPFVLPLAHKHNIKILPADSEHSAIFQC  234 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~--aG~li~~~a~~~~~~IlPVDSEHsAIfQ~  234 (353)
                       +.+.++.  .++|+|+.+..-.+-..-...++++||.+....-..+.-  -..-+.++|+++|.++.. +|---...+.
T Consensus        53 -~~~~ell--~~~DvVvi~a~~~~~~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l~v-~sga~~g~d~  128 (265)
T PRK13304         53 -LSIDELV--EDVDLVVECASVNAVEEVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKIYL-PSGAIVGLDG  128 (265)
T ss_pred             -CCHHHHh--cCCCEEEEcCChHHHHHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEEEE-eCchHHhHHH
Confidence             1234444  468999998655555555678999999987633222211  123566788999988774 5533443588


Q ss_pred             hcCCCCCCcceEEEEecCCc
Q 018600          235 IQGLPEGALRRIILTASGGA  254 (353)
Q Consensus       235 L~g~~~~~v~kIiLTASGGP  254 (353)
                      |+......++.+.+|..--|
T Consensus       129 i~a~~~G~i~~V~~~~~k~p  148 (265)
T PRK13304        129 IKAASLGEIKSVTLTTRKPP  148 (265)
T ss_pred             HHHHhcCCccEEEEEEecCh
Confidence            87555667888888876555

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.39  E-value=0.0065  Score=68.38  Aligned_cols=194  Identities=18%  Similarity=0.214  Sum_probs=126.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceE------------EEEEeecCCHHHHHHHHHhh-CCCEEEEeCccchHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFR------------VVALAAGSNITLLADQVKRF-KPQVVAVRNESLLDEIK  141 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~------------VvaLaagsNv~lL~~Q~~eF-kPk~V~i~de~~~~~l~  141 (353)
                      .+|||+|+|| |.||....+.+.++|+ ++            +|++ |..|.+.+.+.++.+ +.+.+.+ |        
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~-~~~~~~~~~~~~~~lV~V-aD~~~~~a~~la~~~~~~~~v~l-D--------  635 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKT-ISYYGDDSEEPTDVHVIV-ASLYLKDAKETVEGIENAEAVQL-D--------  635 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcC-ccccccccccccccEEEE-ECCCHHHHHHHHHhcCCCceEEe-e--------
Confidence            4789999998 9999999999998876 33            3333 455666655555554 2222222 1        


Q ss_pred             HHhhcCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeE
Q 018600          142 EALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKI  221 (353)
Q Consensus       142 ~~l~~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~I  221 (353)
                                  +...+.+.++.+  ++|.|++++.......-..+|+++||.+.-+.  ..+..-.-+.+.|++.|+.+
T Consensus       636 ------------v~D~e~L~~~v~--~~DaVIsalP~~~H~~VAkaAieaGkHvv~ek--y~~~e~~~L~e~Ak~AGV~~  699 (1042)
T PLN02819        636 ------------VSDSESLLKYVS--QVDVVISLLPASCHAVVAKACIELKKHLVTAS--YVSEEMSALDSKAKEAGITI  699 (1042)
T ss_pred             ------------cCCHHHHHHhhc--CCCEEEECCCchhhHHHHHHHHHcCCCEEECc--CCHHHHHHHHHHHHHcCCEE
Confidence                        122344444443  49999999999999999999999999998774  33445556678899999999


Q ss_pred             ee---cCCchhH--HHHhhcCC--CCCCcceEEEEecCCc---CCCCChhhhhcCCHHHHhc---CC--CCCCCCcccee
Q 018600          222 LP---ADSEHSA--IFQCIQGL--PEGALRRIILTASGGA---FRDWPVEKLKEVKVADALK---HP--NWSMGKKITVD  286 (353)
Q Consensus       222 lP---VDSEHsA--IfQ~L~g~--~~~~v~kIiLTASGGP---Fr~~~~e~l~~vT~~~ALk---HP--nW~MG~KITID  286 (353)
                      +|   .|.-...  .-+++...  ....|..+....=|=|   +-+=|+.---.-+|+.+|+   .|  -|.-|+.++||
T Consensus       700 m~e~GlDPGid~~lA~~~Id~~~~~~GkI~s~~s~~GGLP~pe~~~npL~YkfsWSp~gvi~~~~npa~~i~~G~~~~V~  779 (1042)
T PLN02819        700 LCEMGLDPGIDHMMAMKMIDDAHERGGKVKSFTSYCGGLPSPEAANNPLAYKFSWNPAGAIKAGQNPAVYKSNGQIIHVD  779 (1042)
T ss_pred             EECCccCHHHHHHHHHHHHHhhcccCCcEEEEEEEEcCccCcccCCCcccccccCCHHHHHHHhcCcceeeECCEEEEec
Confidence            87   4555444  44555432  2345666666555545   2333333223344444433   34  37789999999


Q ss_pred             cccccchhHH
Q 018600          287 SATLFNKGLE  296 (353)
Q Consensus       287 SATmmNKgLE  296 (353)
                      ...||...-+
T Consensus       780 ~~~l~~~~~~  789 (1042)
T PLN02819        780 GENLFASAVR  789 (1042)
T ss_pred             chhhhhhccc
Confidence            9887766544

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.20  E-value=0.00071  Score=56.48  Aligned_cols=35  Identities=40%  Similarity=0.768  Sum_probs=33.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      ||+|+|+||.+|+..++.+.+||+ |+++.+..+++
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeeecc
Confidence            699999999999999999999885 99999999888

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01761 thiaz-red thiazolinyl imide reductase

Probab=97.18  E-value=0.0024  Score=63.52  Aligned_cols=127  Identities=18%  Similarity=0.186  Sum_probs=89.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|+ |+ |..-++.+++.|++++++|+.. ++.+...+.+++|....        |                  
T Consensus         3 ~~rVgViG~-~~-G~~h~~al~~~~~~~eLvaV~d-~~~erA~~~A~~~gi~~--------y------------------   53 (343)
T TIGR01761         3 VQSVVVCGT-RF-GQFYLAAFAAAPERFELAGILA-QGSERSRALAHRLGVPL--------Y------------------   53 (343)
T ss_pred             CcEEEEEeH-HH-HHHHHHHHHhCCCCcEEEEEEc-CCHHHHHHHHHHhCCCc--------c------------------
Confidence            578999999 75 9999999999887899999876 57888888888887431        1                  


Q ss_pred             cHHHHHHHhcCCCCcEEEE--eccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHHH
Q 018600          156 GEQGVIEAARHPDAVTVVT--GIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQ  233 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~--AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ  233 (353)
                        ..+.++...+++|.|..  +..+..+-.-+.+|+++||.|.. =|=.-..-+.-+.++|+++|..+. | ..++--++
T Consensus        54 --~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL~-EKPla~~Ea~el~~~A~~~g~~l~-v-~~f~p~~~  128 (343)
T TIGR01761        54 --CEVEELPDDIDIACVVVRSAIVGGQGSALARALLARGIHVLQ-EHPLHPRDIQDLLRLAERQGRRYL-V-NTFYPHLP  128 (343)
T ss_pred             --CCHHHHhcCCCEEEEEeCCCCCCccHHHHHHHHHhCCCeEEE-cCCCCHHHHHHHHHHHHHcCCEEE-E-EecCHHHH
Confidence              12344555566777776  33577889999999999998763 121112335567788888888766 3 34555555


Q ss_pred             hhc
Q 018600          234 CIQ  236 (353)
Q Consensus       234 ~L~  236 (353)
                      .++
T Consensus       129 ~vr  131 (343)
T TIGR01761       129 AVR  131 (343)
T ss_pred             HHH
Confidence            554

This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=97.17  E-value=0.0061  Score=59.44  Aligned_cols=159  Identities=20%  Similarity=0.279  Sum_probs=91.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .||+|+|+ |.||+..+.-+.+.+ ++++++++... +.+.+ +.++++.-.                         ..+
T Consensus         2 lrVAIIG~-G~IG~~h~~~ll~~~-~~elvaV~d~d~es~~l-a~A~~~Gi~-------------------------~~~   53 (285)
T TIGR03215         2 VKVAIIGS-GNIGTDLMYKLLRSE-HLEMVAMVGIDPESDGL-ARARELGVK-------------------------TSA   53 (285)
T ss_pred             cEEEEEeC-cHHHHHHHHHHHhCC-CcEEEEEEeCCcccHHH-HHHHHCCCC-------------------------EEE
Confidence            47999996 999998865555544 69999987542 11222 234444321                         111


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHh------hhcCCeEeec-CCch
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA------HKHNIKILPA-DSEH  228 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a------~~~~~~IlPV-DSEH  228 (353)
                        ++..++.+++++|.|+.+.....-..-...|+++||.+. -+|-.-  -|||+-+-.      ...+.+++-. ..-.
T Consensus        54 --~~~e~ll~~~dIDaV~iaTp~~~H~e~a~~al~aGk~VI-dekPa~--~~plvvp~VN~~~~~~~~~~~iv~c~~~at  128 (285)
T TIGR03215        54 --EGVDGLLANPDIDIVFDATSAKAHARHARLLAELGKIVI-DLTPAA--IGPYVVPAVNLDEHLDAPNVNMVTCGGQAT  128 (285)
T ss_pred             --CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcCCEEE-ECCccc--cCCccCCCcCHHHHhcCcCCCEEEcCcHHH
Confidence              123444556789999999999999999999999999874 333333  245543311      1122333322 2222


Q ss_pred             hHHHHhhcCC-CCC--CcceEEEEecCCcCCCCChhhhhcCCH
Q 018600          229 SAIFQCIQGL-PEG--ALRRIILTASGGAFRDWPVEKLKEVKV  268 (353)
Q Consensus       229 sAIfQ~L~g~-~~~--~v~kIiLTASGGPFr~~~~e~l~~vT~  268 (353)
                      ..+...|+-. +..  .|..-+-..|+||...--.|||..-|-
T Consensus       129 ip~~~al~r~~d~~~~~iv~ti~s~S~g~g~r~~idel~~~t~  171 (285)
T TIGR03215       129 IPIVAAISRVAPVHYAEIVASIASRSAGPGTRANIDEFTETTS  171 (285)
T ss_pred             HHHHHHHHHhhccccEEEEEEEEeeccCCCchhHHHHHHHHHH
Confidence            3333333211 111  222334667899965566677775443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.04  E-value=0.007  Score=59.23  Aligned_cols=186  Identities=18%  Similarity=0.132  Sum_probs=103.3

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-CCEEEEe-CccchHHHHHHhhcCCCCcEEEec
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-PQVVAVR-NESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk-Pk~V~i~-de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      |.|||+ |.+|+.+++.+.++++..+|  +.+++|.+++.+.++++. ++.-.+. |..                    .
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v--~va~r~~~~~~~~~~~~~~~~~~~~~~d~~--------------------~   57 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEV--TVADRNPEKAERLAEKLLGDRVEAVQVDVN--------------------D   57 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EE--EEEESSHHHHHHHHT--TTTTEEEEE--TT--------------------T
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcE--EEEECCHHHHHHHHhhccccceeEEEEecC--------------------C
Confidence            789999 99999999999998653233  346789999988887642 3332221 111                    2


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce-eecccchhHHhhhcCCeEee---cCC---chh
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILP---ADS---EHS  229 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL-V~aG~li~~~a~~~~~~IlP---VDS---EHs  229 (353)
                      .+.|.++++.  .|+|||+...+.+..-..+|+++|....=   -+. ...=.-+.+.+++.|..+++   .|+   ..-
T Consensus        58 ~~~l~~~~~~--~dvVin~~gp~~~~~v~~~~i~~g~~yvD---~~~~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~  132 (386)
T PF03435_consen   58 PESLAELLRG--CDVVINCAGPFFGEPVARACIEAGVHYVD---TSYVTEEMLALDEEAKEAGVTALPGCGFDPGLSNLL  132 (386)
T ss_dssp             HHHHHHHHTT--SSEEEE-SSGGGHHHHHHHHHHHT-EEEE---SS-HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHH
T ss_pred             HHHHHHHHhc--CCEEEECCccchhHHHHHHHHHhCCCeec---cchhHHHHHHHHHHHHhhCCEEEeCcccccchHHHH
Confidence            3456666654  69999999888888889999999988554   111 11112234567778888775   333   222


Q ss_pred             HH--HHhhcCCCCCCcceEEEEecCCcCCCCChhh---hhcCCHHHHhcC-----CCCCCCCccceecccccch
Q 018600          230 AI--FQCIQGLPEGALRRIILTASGGAFRDWPVEK---LKEVKVADALKH-----PNWSMGKKITVDSATLFNK  293 (353)
Q Consensus       230 AI--fQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~---l~~vT~~~ALkH-----PnW~MG~KITIDSATmmNK  293 (353)
                      |-  .|.|.+ ....++.+.+...|-|.-.++...   --.-+++..|..     ..|.-|+.+.++..+...+
T Consensus       133 a~~~~~~~~~-~~~~v~~~~~~~g~~~~p~~~~~~~~~~~~ws~~~~l~e~~~~~~~~~~G~~~~v~~~~~~~~  205 (386)
T PF03435_consen  133 ARYAADELDA-EGDEVESVDIYVGGLPAPEAPDNPLGYKFTWSPEGVLEEYSPPARVYRDGKWVEVPPFSEEER  205 (386)
T ss_dssp             HHHHHHHHHH-TTHEEEEEEEEEEEEEEGCG--TTTSEEBSS-HHHHHHHHCS-EEEEETTEEEEEETTTTCCC
T ss_pred             HHHHHHHhhh-hcccceEEEEEEccccCCCCCCCCcccceeeeehhhHHhhcccceEeeCCEEEEecCccccce
Confidence            22  122221 123577777655555111111111   112233333332     2577888888887765544

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional

Probab=96.96  E-value=0.0037  Score=68.48  Aligned_cols=127  Identities=16%  Similarity=0.087  Sum_probs=82.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC--------CceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE--------DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p--------d~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      -+|+|+| .|.||+..++++.++.        -+++|++++. ++-.++       +|+-+   |   ...+.+.+.+..
T Consensus       459 i~i~l~G-~G~VG~~l~~~l~~~~~~l~~~~g~~~~v~~I~~-s~~~~~-------~~~gi---~---~~~~~~~~~~~~  523 (810)
T PRK09466        459 IGLVLFG-KGNIGSRWLELFAREQSTLSARTGFEFVLVGVVD-SRRSLL-------NYDGL---D---ASRALAFFDDEA  523 (810)
T ss_pred             EEEEEEe-cCCChHHHHHHHHHHHHHHHHhcCCCEEEEEEEe-CCcccc-------CccCC---C---HHHHHhhHHhhc
Confidence            4899999 7999999999997754        3588999864 332211       12111   1   111221111111


Q ss_pred             CCcEEEecHHHHHHHhcCCC--CcEEEEeccCccCcHHHHHHHHcCCcEeeecccc---eeecccchhHHhhhcCCeEe
Q 018600          149 EKPEILAGEQGVIEAARHPD--AVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET---LIAGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~a~~~~--~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES---LV~aG~li~~~a~~~~~~Il  222 (353)
                      ..    ...+.+.+.....+  .++||....|-........|+++||.|-.|||..   ...-++-++++|+++++.++
T Consensus       524 ~~----~~~~~~~e~i~~~~~~~~vvVd~t~~~~~~~~~~~aL~~G~~VVtaNK~~~a~~~~~~~~l~~~a~~~~~~~~  598 (810)
T PRK09466        524 VE----WDEESLFLWLRAHPYDELVVLDVTASEQLALQYPDFASHGFHVISANKLAGSSPSNFYRQIKDAFAKTGRHWL  598 (810)
T ss_pred             CC----ccHHHHHHHHhhcCCCCcEEEECCCChHHHHHHHHHHHcCCEEEcCCcccccccHHHHHHHHHHHHHcCCeEE
Confidence            11    12344555554333  4699999988766666679999999999999984   34677788899999988753

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=96.95  E-value=0.0067  Score=59.87  Aligned_cols=110  Identities=20%  Similarity=0.177  Sum_probs=72.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |.||+|.|. |.||+..++.+.++| .|+|+|+... +.+.....++++.-+ +....+...+    .+.+  .+..+. 
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~-d~eLvav~d~-~~~~~~~la~~~G~~-~~~~~~~~~~----~~~~--~~i~V~-   69 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQP-DMELVGVAKT-KPDYEARVAVEKGYP-LYVADPEREK----AFEE--AGIPVA-   69 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCC-CcEEEEEECC-ChHHHHHHHHhcCCC-ccccCccccc----cccC--CceEEc-
Confidence            458999999 999999999999876 5999999874 456666666654322 1111111111    0111  122232 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANK  200 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANK  200 (353)
                      |.  +.++.  .++|+|+.+.....+..-...++++||++..-.-
T Consensus        70 ~~--~~el~--~~vDVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~  110 (341)
T PRK04207         70 GT--IEDLL--EKADIVVDATPGGVGAKNKELYEKAGVKAIFQGG  110 (341)
T ss_pred             CC--hhHhh--ccCCEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence            21  33343  3699999999999999999999999988766654

>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]

Probab=96.79  E-value=0.02  Score=58.41  Aligned_cols=154  Identities=20%  Similarity=0.276  Sum_probs=108.6

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh-hCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR-FKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e-FkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      -..|-||.++|| |.-|+-.+.-+..-| .|+|+|++. .|++...+..++ +.|+.-++ +.....++..++.. + + 
T Consensus        14 ~G~PiRVGlIGA-G~mG~~ivtQi~~m~-Gm~vvaisd-~~~~~ak~A~~~ag~~~~~~~-e~~~~s~~a~Ai~a-G-K-   86 (438)
T COG4091          14 EGKPIRVGLIGA-GEMGTGIVTQIASMP-GMEVVAISD-RNLDAAKRAYDRAGGPKIEAV-EADDASKMADAIEA-G-K-   86 (438)
T ss_pred             cCCceEEEEecc-cccchHHHHHHhhcC-CceEEEEec-ccchHHHHHHHHhcCCccccc-ccchhhHHHHHHhc-C-c-
Confidence            366889999997 888998888888776 599999885 578877777764 44554333 23334455555542 1 1 


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEeccCc--cCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe-ecCCch
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIVGC--AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL-PADSEH  228 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIvG~--aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il-PVDSEH  228 (353)
                      -.+.++  ..++...+.+|+||.| .|.  .|-+-.+.||.+||.+-+-|=|.=|.=|+++++.|.+.|+-.- ----|-
T Consensus        87 i~vT~D--~~~i~~~~~IdvIIdA-TG~p~vGA~~~l~Ai~h~KHlVMmNVEaDvtIGp~Lk~~Ad~~GviyS~~~GDeP  163 (438)
T COG4091          87 IAVTDD--AELIIANDLIDVIIDA-TGVPEVGAKIALEAILHGKHLVMMNVEADVTIGPILKQQADAAGVIYSGGAGDEP  163 (438)
T ss_pred             EEEecc--hhhhhcCCcceEEEEc-CCCcchhhHhHHHHHhcCCeEEEEEeeeceeecHHHHHHHhhcCeEEeccCCCCc
Confidence            233333  3445667889999988 554  4567789999999999999999999999999999998875332 223456


Q ss_pred             hHHHHhhc
Q 018600          229 SAIFQCIQ  236 (353)
Q Consensus       229 sAIfQ~L~  236 (353)
                      +++..+..
T Consensus       164 ~~~mEL~e  171 (438)
T COG4091         164 SSCMELYE  171 (438)
T ss_pred             HHHHHHHH
Confidence            66655543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.79  E-value=0.0066  Score=54.49  Aligned_cols=98  Identities=21%  Similarity=0.247  Sum_probs=60.7

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec--
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG--  156 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G--  156 (353)
                      |+|+|+||.+|.+.++.+.+  ..|+|.+|+=..+ ....++.+.-.. .++..|-...+.|.++|.+.+. +-...+  
T Consensus         1 I~V~GatG~~G~~v~~~L~~--~~~~V~~l~R~~~-~~~~~~l~~~g~-~vv~~d~~~~~~l~~al~g~d~-v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLS--AGFSVRALVRDPS-SDRAQQLQALGA-EVVEADYDDPESLVAALKGVDA-VFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHH--TTGCEEEEESSSH-HHHHHHHHHTTT-EEEES-TT-HHHHHHHHTTCSE-EEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHh--CCCCcEEEEeccc-hhhhhhhhcccc-eEeecccCCHHHHHHHHcCCce-EEeecCcc
Confidence            78999999999999999998  5799999985543 334444444444 4556777767777777765431 112222  


Q ss_pred             -------HHHHHHHhcCCCCcEEEEeccCccC
Q 018600          157 -------EQGVIEAARHPDAVTVVTGIVGCAG  181 (353)
Q Consensus       157 -------~~gl~~~a~~~~~D~Vv~AIvG~aG  181 (353)
                             ...+.+.|....++.+|-.-.|...
T Consensus        76 ~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~  107 (233)
T PF05368_consen   76 HPSELEQQKNLIDAAKAAGVKHFVPSSFGADY  107 (233)
T ss_dssp             CCCHHHHHHHHHHHHHHHT-SEEEESEESSGT
T ss_pred             hhhhhhhhhhHHHhhhccccceEEEEEecccc
Confidence                   1235555555556666655445444

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.78  E-value=0.0021  Score=63.17  Aligned_cols=37  Identities=22%  Similarity=0.485  Sum_probs=32.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      |+||+|+|+||.+|+..++.+.++|+ +++++++.++.
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~-~elv~v~~~~~   38 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPE-VEIVAVTSRSS   38 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCC-ceEEEEECccc
Confidence            47899999999999999999999875 99999987543

>COG0460 ThrA Homoserine dehydrogenase [Amino acid transport and metabolism]

Probab=96.70  E-value=0.003  Score=63.09  Aligned_cols=120  Identities=26%  Similarity=0.300  Sum_probs=82.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC--------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHED--------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd--------~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      -+|+|+| .|-||+..+++++++.+        .|+|++++.++ ..+..    .+....        +..++...    
T Consensus         4 v~v~l~G-~G~VG~~~~~il~~~~~~l~~~~g~~i~v~~v~~~~-~~~~~----~~~~~~--------~~~~~~~~----   65 (333)
T COG0460           4 VKVGLLG-LGTVGSGVLEILAEKQEELRKRAGIEIRVVAVADRD-GSLVR----DLDLLN--------AEVWTTDG----   65 (333)
T ss_pred             EEEEEEc-cCchhHHHHHHHHHhHHHHHhhcCCceEEEEEEecc-chhcc----cccccc--------hhhheecc----
Confidence            4799998 58899999999998754        67777776543 22211    111100        00111100    


Q ss_pred             CCcEEEecHHHHHHHhcCCCCcEEEEeccC-ccCcH---HHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeE
Q 018600          149 EKPEILAGEQGVIEAARHPDAVTVVTGIVG-CAGLK---PTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKI  221 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG-~aGL~---pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~I  221 (353)
                         ..-   .+ .+++...++|+||.++.| +..=+   -...|+++||.|.-|||--|-.-|+-|+++|+++|+.+
T Consensus        66 ---~~~---~~-~~~~~~~~~dvvve~~~~d~~~~~~~~~~~~al~~GkhVVTaNK~~lA~~~~el~~~A~~~g~~l  135 (333)
T COG0460          66 ---ALS---LG-DEVLLDEDIDVVVELVGGDVEPAEPADLYLKALENGKHVVTANKALLALHYHELREAAEKNGVKL  135 (333)
T ss_pred             ---ccc---cc-HhhhccccCCEEEecCcccCCchhhHHHHHHHHHcCCeEECCCchHhHhhHHHHHHHHHHhCCeE
Confidence               000   11 345667789999999999 54444   56789999999999999999999999999999998776

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=96.70  E-value=0.01  Score=58.56  Aligned_cols=160  Identities=14%  Similarity=0.209  Sum_probs=101.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH-HHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT-LLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~-lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+| ||.||+.-+.-+.+. +.+++++++.. |.+ ...+.+++|.-...                        +
T Consensus         4 klrVAIIG-tG~IGt~hm~~l~~~-~~velvAVvdi-d~es~gla~A~~~Gi~~~------------------------~   56 (302)
T PRK08300          4 KLKVAIIG-SGNIGTDLMIKILRS-EHLEPGAMVGI-DPESDGLARARRLGVATS------------------------A   56 (302)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHhcC-CCcEEEEEEeC-ChhhHHHHHHHHcCCCcc------------------------c
Confidence            45899999 999999977666665 46999998765 443 22244666542211                        1


Q ss_pred             ecHHHHHHHhcC---CCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhh------hcCCeEeec-
Q 018600          155 AGEQGVIEAARH---PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAH------KHNIKILPA-  224 (353)
Q Consensus       155 ~G~~gl~~~a~~---~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~------~~~~~IlPV-  224 (353)
                         +++.++.++   +++|+|+.+-....-.+-...++++||.+ +-||=..  -||++-+...      ..+.+++-. 
T Consensus        57 ---~~ie~LL~~~~~~dIDiVf~AT~a~~H~e~a~~a~eaGk~V-ID~sPA~--~~PlvVP~VN~~~~~~~~~~~iia~p  130 (302)
T PRK08300         57 ---EGIDGLLAMPEFDDIDIVFDATSAGAHVRHAAKLREAGIRA-IDLTPAA--IGPYCVPAVNLDEHLDAPNVNMVTCG  130 (302)
T ss_pred             ---CCHHHHHhCcCCCCCCEEEECCCHHHHHHHHHHHHHcCCeE-EECCccc--cCCcccCcCCHHHHhcccCCCEEECc
Confidence               123334444   68999999999988888899999999865 4455444  4677755332      123333311 


Q ss_pred             CCchhHHHHhhcCCCCCCcceEEE---EecCCcCCCCChhhhhcCCH
Q 018600          225 DSEHSAIFQCIQGLPEGALRRIIL---TASGGAFRDWPVEKLKEVKV  268 (353)
Q Consensus       225 DSEHsAIfQ~L~g~~~~~v~kIiL---TASGGPFr~~~~e~l~~vT~  268 (353)
                      ..--..+...|.-....+..+|+-   ..|=||.+.--.|||..-|-
T Consensus       131 ~~ati~~v~Al~~v~~~~~~eIvat~~s~s~g~gtr~nidE~~~~t~  177 (302)
T PRK08300        131 GQATIPIVAAVSRVAPVHYAEIVASIASKSAGPGTRANIDEFTETTS  177 (302)
T ss_pred             cHHHHHHHHHhcccCcCceeeeeeeehhhccCCcccccHHHHHHHHH
Confidence            222333444444333346777872   25669998888999877554

>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional

Probab=96.67  E-value=0.01  Score=65.04  Aligned_cols=129  Identities=20%  Similarity=0.202  Sum_probs=85.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCC-------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcC
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHED-------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV  147 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd-------~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~  147 (353)
                      .+.+|+|+| .|-||.+.++++.+..+       +++|++++. ++-.+       |+|+-+   |   ...+.+.+...
T Consensus       464 ~~~~i~l~G-~G~VG~~~~~~l~~~~~~l~~~~~~l~v~~i~~-s~~~~-------~~~~g~---~---~~~~~~~~~~~  528 (819)
T PRK09436        464 QVLDVFVIG-VGGVGGALLEQIKRQQPWLKKKNIDLRVCGIAN-SRKML-------LDEHGI---D---LDNWREELAEA  528 (819)
T ss_pred             ccccEEEEe-cCHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEc-CCccc-------cCCCCC---C---HHHHHHHHhhc
Confidence            356899999 79999999999976543       577888753 32111       222211   1   12333333221


Q ss_pred             CCCcEEEecHHHHHHHhcC--CCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceee---cccchhHHhhhcCCeEe
Q 018600          148 EEKPEILAGEQGVIEAARH--PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIA---GGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       148 ~~~~~v~~G~~gl~~~a~~--~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~---aG~li~~~a~~~~~~Il  222 (353)
                      .    -..+.+.+.+....  .+.|+||....+..-..-...|+++||.|-.|||-.+..   -++-++++|+++++.++
T Consensus       529 ~----~~~~~~~~~~~~~~~~~~~~vvvd~t~~~~~~~~~~~al~~g~~VVtaNK~~~a~~~~~~~el~~~a~~~~~~~~  604 (819)
T PRK09436        529 G----EPFDLDRLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLAAGFHVVTPNKKANTSSYAYYHQLREAARKSRRKFL  604 (819)
T ss_pred             c----CCCCHHHHHHHHhhcCCCCCEEEECCCChHHHHHHHHHHHcCCEEEcCCchhccCCHHHHHHHHHHHHHcCCeEE
Confidence            1    11234555555532  357999999988654555569999999999999998873   67778999999998875

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.57  E-value=0.0061  Score=57.53  Aligned_cols=127  Identities=20%  Similarity=0.187  Sum_probs=75.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |.||+|+|+||-+|+..++.+.++|+ ++|+++..... +...+. .++                         ++.+  
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~-~elvav~d~~~-~~~~~~-~~~-------------------------~i~~--   50 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAED-LELVAAVDRPG-SPLVGQ-GAL-------------------------GVAI--   50 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEecCC-cccccc-CCC-------------------------Cccc--
Confidence            35899999999999999999988765 99999875432 222111 000                         0111  


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHHHhh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI  235 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~L  235 (353)
                       .+.+.++.+  ++|+|+....-.....-...|+++||.+.+.+=-.-.---..+.+.+++.++-+.|-=|---.+++-|
T Consensus        51 -~~dl~~ll~--~~DvVid~t~p~~~~~~~~~al~~G~~vvigttG~s~~~~~~l~~aa~~~~v~~s~n~s~g~~~~~~l  127 (257)
T PRK00048         51 -TDDLEAVLA--DADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFTEEQLAELEEAAKKIPVVIAPNFSIGVNLLMKL  127 (257)
T ss_pred             -cCCHHHhcc--CCCEEEECCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhcCCCEEEECcchHHHHHHHHH
Confidence             123444443  58999987776677788899999999998764000000011233334444555555545444444433

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.50  E-value=0.018  Score=54.86  Aligned_cols=98  Identities=14%  Similarity=0.151  Sum_probs=62.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .||+|.|++|-+|+..++.+.++| +++++++....+-+...+                ...++...   ...++.++. 
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~-~~elvav~d~~~~~~~~~----------------~~~~~~~~---~~~gv~~~~-   60 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAE-GLQLVAAFERHGSSLQGT----------------DAGELAGI---GKVGVPVTD-   60 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCCccccCC----------------CHHHhcCc---CcCCceeeC-
Confidence            479999999999999999999886 599999887554332110                01111000   001122322 


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeec
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALAN  199 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLAN  199 (353)
                        .+.++ . .++|+||..-.=.+...-...|+++|+.+...-
T Consensus        61 --d~~~l-~-~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigt   99 (266)
T TIGR00036        61 --DLEAV-E-TDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGT   99 (266)
T ss_pred             --CHHHh-c-CCCCEEEECCChHHHHHHHHHHHHCCCCEEEEC
Confidence              23444 2 458999987655555666788899998887744

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.43  E-value=0.0097  Score=58.72  Aligned_cols=35  Identities=17%  Similarity=0.464  Sum_probs=30.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      +||+|+|+||.+|...++.+.+||+ ++++++.+.+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~-~el~~l~~s~   35 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPE-VEITYLVSSR   35 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCC-ceEEEEeccc
Confidence            3799999999999999999999975 8999885433

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.17  E-value=0.019  Score=49.11  Aligned_cols=37  Identities=27%  Similarity=0.350  Sum_probs=30.5

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~  119 (353)
                      |.|+|+||.||+..++-+.+.+  ++|.+++  +|-+++.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~--~~V~~~~--R~~~~~~~   37 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRG--HEVTALV--RSPSKAED   37 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT--SEEEEEE--SSGGGHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCC--CEEEEEe--cCchhccc
Confidence            7899999999999999998875  9999998  44444444

...

>PLN02700 homoserine dehydrogenase family protein

Probab=96.14  E-value=0.049  Score=55.32  Aligned_cols=56  Identities=25%  Similarity=0.185  Sum_probs=46.4

Q ss_pred             CCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe
Q 018600          166 HPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       166 ~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il  222 (353)
                      +...+++|+.-.+..-......|+++|+.|..|||--+-..++.++++++ ++++++
T Consensus       107 ~~~~~ViVD~T~s~~~~~~y~~aL~~G~hVVTaNK~~~a~~~~~~~~la~-~~~~~~  162 (377)
T PLN02700        107 KSTGLVVVDCSASMETIGALNEAVDLGCCIVLANKKPLTSTLEDYDKLAA-HPRRIR  162 (377)
T ss_pred             ccCCCEEEECCCChHHHHHHHHHHHCCCeEEcCCchHhccCHHHHHHHHH-cCCeEE
Confidence            34569999998886666677789999999999999999999999988885 566654

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.99  E-value=0.011  Score=59.43  Aligned_cols=39  Identities=31%  Similarity=0.544  Sum_probs=34.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI  114 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv  114 (353)
                      .++||+|+||||.+|...++++.+||+ |+|..++.+++.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~-~el~~l~s~~sa   75 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPD-FEITVMTADRKA   75 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCC-CeEEEEEChhhc
Confidence            556999999999999999999999984 999999876543

>PRK10206 putative oxidoreductase; Provisional

Probab=95.94  E-value=0.12  Score=50.73  Aligned_cols=200  Identities=18%  Similarity=0.237  Sum_probs=118.8

Q ss_pred             eeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -||+|+|. |.|+.. -+..+.+.+++++|+|++-. |-+. .+.+++|.-.                        .++ 
T Consensus         2 irvgiiG~-G~~~~~~h~~~~~~~~~~~~l~av~d~-~~~~-~~~~~~~~~~------------------------~~~-   53 (344)
T PRK10206          2 INCAFIGF-GKSTTRYHLPYVLNRKDSWHVAHIFRR-HAKP-EEQAPIYSHI------------------------HFT-   53 (344)
T ss_pred             eEEEEECC-CHHHhheehhhHhcCCCCEEEEEEEcC-ChhH-HHHHHhcCCC------------------------ccc-
Confidence            47999997 666654 46766666678999998754 4333 3444444310                        011 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cCCch
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSEH  228 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VDSEH  228 (353)
                        +.+.++.+.+++|.|+.+..=..=..-+.+|+++||.|.+ -|=--  +.-..-+.+++++++..+..     -+..+
T Consensus        54 --~~~~ell~~~~iD~V~I~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~  130 (344)
T PRK10206         54 --SDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLV-EKPFTPTLAEAKELFALAKSKGLTVTPYQNRRFDSCF  130 (344)
T ss_pred             --CCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHcCCcEEE-ecCCcCCHHHHHHHHHHHHHhCCEEEEEEeeeECHHH
Confidence              2345666778899999988777777889999999998875 44322  22345567888888877653     23445


Q ss_pred             hHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCC
Q 018600          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (353)
Q Consensus       229 sAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (353)
                      ..+-++|+.....+|..+-  +.=+.||..+.            ..|.+       -+.+.|++-|--.|- +.|||| +
T Consensus       131 ~~~k~li~~g~iG~i~~i~--~~~~~~~~~~~------------~~~~~-------~~gG~l~d~g~H~ld~~~~l~G-~  188 (344)
T PRK10206        131 LTAKKAIESGKLGEIVEVE--SHFDYYRPVAE------------TKPGL-------PQDGAFYGLGVHTMDQIISLFG-R  188 (344)
T ss_pred             HHHHHHHHcCCCCCeEEEE--EEecccCCccc------------cccCC-------CCCceeechhHHHHHHHHHHcC-C
Confidence            5677777654444554433  32222332110            01211       123446666654444 578998 4


Q ss_pred             CCceEEEEc-------CCcceEEEEEecCC
Q 018600          308 YDNIEIIIH-------PQSIIHSMVETQVL  330 (353)
Q Consensus       308 ~d~IevvIH-------PqSiIHsmVef~DG  330 (353)
                      ++.+.....       .+-..+.+++| +|
T Consensus       189 ~~~v~a~~~~~~~~~~~~d~~~~~l~f-~~  217 (344)
T PRK10206        189 PDHVAYDIRSLRNKANPDDTFEAQLFY-GD  217 (344)
T ss_pred             CeEEEEEeecccCCCCCCceEEEEEEe-CC
Confidence            556655432       23456777888 44

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.81  E-value=0.15  Score=49.48  Aligned_cols=141  Identities=17%  Similarity=0.234  Sum_probs=90.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEecH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGE  157 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G~  157 (353)
                      +|.|.|. |-||++.++.++..|-+|+.+++ +.++.++..+..+-|.++.+  +                         
T Consensus         2 ~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v-~D~~~ek~~~~~~~~~~~~~--s-------------------------   52 (255)
T COG1712           2 KVGIVGC-GAIGKFLLELVRDGRVDFELVAV-YDRDEEKAKELEASVGRRCV--S-------------------------   52 (255)
T ss_pred             eEEEEec-cHHHHHHHHHHhcCCcceeEEEE-ecCCHHHHHHHHhhcCCCcc--c-------------------------
Confidence            5888986 88999999999999989999885 57788998888888877655  1                         


Q ss_pred             HHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeeccc--chhHHhhhcCCeEeecCCchhHHHHhh
Q 018600          158 QGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGP--FVLPLAHKHNIKILPADSEHSAIFQCI  235 (353)
Q Consensus       158 ~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~--li~~~a~~~~~~IlPVDSEHsAIfQ~L  235 (353)
                       .+.++.  .++|++|.+-+=-|=..-...++++|+++....=-.|.-=|-  -+..+||.++.++.=.-----+| ..|
T Consensus        53 -~ide~~--~~~DlvVEaAS~~Av~e~~~~~L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~~pSGAiGGl-D~l  128 (255)
T COG1712          53 -DIDELI--AEVDLVVEAASPEAVREYVPKILKAGIDVIVMSVGALADEGLRERLRELAKCGGARVYLPSGAIGGL-DAL  128 (255)
T ss_pred             -cHHHHh--hccceeeeeCCHHHHHHHhHHHHhcCCCEEEEechhccChHHHHHHHHHHhcCCcEEEecCccchhH-HHH
Confidence             123333  357788877665555566677888888876543222211110  13457777777764221111111 222


Q ss_pred             cCCCCCCcceEEEEec
Q 018600          236 QGLPEGALRRIILTAS  251 (353)
Q Consensus       236 ~g~~~~~v~kIiLTAS  251 (353)
                      ..-+...|+.+.||.-
T Consensus       129 ~aar~g~i~~V~lttr  144 (255)
T COG1712         129 AAARVGGIEEVVLTTR  144 (255)
T ss_pred             HHhhcCCeeEEEEEee
Confidence            2223467999999973

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.80  E-value=0.11  Score=46.28  Aligned_cols=64  Identities=20%  Similarity=0.187  Sum_probs=45.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. ++..+.+.++.++...+...+ .|-...+.+..
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~-r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEA--GADIVGAG-RSEPSETQQQVEALGRRFLSLTADLSDIEAIKA   69 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc-CchHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            478999999999999999988875  57887765 445566777777766554433 34444444444

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.78  E-value=0.02  Score=56.96  Aligned_cols=38  Identities=32%  Similarity=0.440  Sum_probs=32.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCCH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSNI  114 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaagsNv  114 (353)
                      ..+|+|+||||-+|...++++.+  ||. ++|..++..++.
T Consensus         4 ~~~vaIvGATG~vG~ellrlL~~~~hP~-~~l~~laS~~sa   43 (336)
T PRK08040          4 GWNIALLGATGAVGEALLELLAERQFPV-GELYALASEESA   43 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhcCCCCc-eEEEEEEccCcC
Confidence            34799999999999999999999  885 899999766543

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.63  E-value=0.031  Score=56.05  Aligned_cols=37  Identities=22%  Similarity=0.553  Sum_probs=30.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE---EEEEeecCCH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR---VVALAAGSNI  114 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~---VvaLaagsNv  114 (353)
                      .+|+|+||||.+|...++++.+||+ |+   +..++..++.
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~-f~v~~l~~~aS~~sa   45 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETK-FNIAEVTLLSSKRSA   45 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCC-CCcccEEEEECcccC
Confidence            4799999999999999999999986 88   6666655443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.52  E-value=0.17  Score=45.73  Aligned_cols=84  Identities=14%  Similarity=0.102  Sum_probs=52.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ++|.|.|+||.||....+-+.++  .++|+.++  +|.+.+.+...+..++...+ .|-...+.+++.+.          
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~----------   66 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATG--RRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLA----------   66 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHH----------
Confidence            46999999999999999988875  57777654  46666666555555444332 34444444444331          


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGC  179 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~  179 (353)
                         .+.+  ...++|.|+++....
T Consensus        67 ---~~~~--~~~~id~vi~~ag~~   85 (248)
T PRK10538         67 ---SLPA--EWRNIDVLVNNAGLA   85 (248)
T ss_pred             ---HHHH--HcCCCCEEEECCCcc
Confidence               1111  224688998876543

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.11  Score=45.50  Aligned_cols=41  Identities=12%  Similarity=0.121  Sum_probs=31.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      +|++.|.|+||+||....+.+.+.   ++|+++.  +|.+.+.+..
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~--r~~~~~~~~~   43 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT---HTLLLGG--RPAERLDELA   43 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh---CCEEEEe--CCHHHHHHHH
Confidence            578999999999999999988865   7787775  4555554433

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=95.47  E-value=0.021  Score=56.44  Aligned_cols=57  Identities=12%  Similarity=0.187  Sum_probs=41.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-CCCEEEEeCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-KPQVVAVRNE  134 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF-kPk~V~i~de  134 (353)
                      +.||+|+||||.+|...++++.+|| .|++++++..+..+. ..--..| +.++|+++-+
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp-~~~l~~~~s~~~~~~-~~~~~~~~~~DvvFlalp   59 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRS-DIELLSIPEAKRKDA-AARRELLNAADVAILCLP   59 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCC-CeEEEEEecCCCCcc-cCchhhhcCCCEEEECCC
Confidence            4589999999999999999999999 599999987654332 1111122 4678877543

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=95.46  E-value=0.043  Score=52.13  Aligned_cols=54  Identities=24%  Similarity=0.401  Sum_probs=42.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----CCHHHHHHHHHhhCCCEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----SNITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----sNv~lL~~Q~~eFkPk~V~i~  132 (353)
                      +||.|+|+||.||......+.+  ..++|+++.-.    .+.+.+.+..++++|++|+-.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~--~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~   58 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKE--RGYEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINC   58 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTT--TSEEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE-
T ss_pred             CEEEEECCCCHHHHHHHHHHhh--CCCEEEEeCchhcCCCCHHHHHHHHHHhCCCeEecc
Confidence            4799999999999999999887  36899998422    366888888999999998754

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=95.42  E-value=0.051  Score=51.71  Aligned_cols=52  Identities=21%  Similarity=0.181  Sum_probs=41.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhhCCCEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-gsNv~lL~~Q~~eFkPk~V~  130 (353)
                      +||.|.|+||+||....+-+.+.  .++|+.... -.+.+.+....++.+|++|+
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~~~~~~~~~v~~~l~~~~~D~Vi   62 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGSGRLENRASLEADIDAVKPTHVF   62 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhC--CCEEEEecCccCCHHHHHHHHHhcCCCEEE
Confidence            57999999999999999988876  456765433 34667777778888999987

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.30  E-value=0.21  Score=45.24  Aligned_cols=65  Identities=12%  Similarity=0.091  Sum_probs=45.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||.++.+-+.+.  .++|+.+.-+.+.+.+.+...+...+... ..|-...+.++.
T Consensus        15 ~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   80 (258)
T PRK06935         15 GKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEK   80 (258)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            378999999999999999998875  67887776556677777777665544333 234444444443

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=95.17  E-value=0.058  Score=53.51  Aligned_cols=56  Identities=13%  Similarity=0.160  Sum_probs=41.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE  134 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de  134 (353)
                      ||+|+|+||..|...++++.+||+ |+++.+++.++.+.......--+.++|+++-+
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~-~el~~l~s~~~~~~~~~~~~~~~~D~vFlalp   58 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDD-IELLSIAPDRRKDAAERAKLLNAADVAILCLP   58 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCC-eEEEEEecccccCcCCHhHhhcCCCEEEECCC
Confidence            699999999999999999999986 99999998876432211100014678777543

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.26  Score=44.58  Aligned_cols=46  Identities=28%  Similarity=0.269  Sum_probs=36.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      ||++.|.|+||.||....+-+.+.  .++|+.+.  +|.+.+.+..++.+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~   46 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYD--INEAGLAALAAELG   46 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHHHhc
Confidence            578999999999999999988875  57788764  67777776666543

>PRK07326 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.25  Score=43.65  Aligned_cols=63  Identities=14%  Similarity=0.216  Sum_probs=41.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC--CCEE-EEeCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK--PQVV-AVRNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk--Pk~V-~i~de~~~~~l~~~  143 (353)
                      +++.|.|+||.||.....-+.++  .++|+++.  +|-+.+.+..++.+  .+.. ...|-...+.+++.
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~--g~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~   72 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAE--GYKVAITA--RDQKELEEAAAELNNKGNVLGLAADVRDEADVQRA   72 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHC--CCEEEEee--CCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHH
Confidence            68999999999999999998875  67887764  56666655555443  2322 22344444445443

>PRK07806 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.32  Score=43.42  Aligned_cols=65  Identities=18%  Similarity=0.142  Sum_probs=39.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEE-EeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||....+-+.+.  .++|++++-+.  +.+.+.+..+....+... ..|-...+.++.
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   73 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAA   73 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            368999999999999999988765  57887764221  223334444443333332 235444444443

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.10  E-value=0.39  Score=42.17  Aligned_cols=66  Identities=20%  Similarity=0.148  Sum_probs=41.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-eCccchHHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      ..|++.|.|+||.||....+-+.+.  .++|+.++.+ ..+.+.+.   .+....++..+ .|-...+.+++.
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQ--GANVVINYAS-SEAGAEALVAEIGALGGKALAVQGDVSDAESVERA   73 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCC-chhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            3478999999999999999998875  6788766543 33333333   33334444443 254444445443

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.28  Score=44.02  Aligned_cols=83  Identities=17%  Similarity=0.135  Sum_probs=50.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC--EEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ--VVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk--~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      |++.|.|+||.||..+.+-+.++  .++|+.+.  +|-+.+.+...++.-.  .+...|-...+.+++.+.         
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---------   78 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEA--GARVHVCD--VSEAALAATAARLPGAKVTATVADVADPAQVERVFD---------   78 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHH---------
Confidence            78999999999999999998876  56776655  3445555444444222  233345444444444331         


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVG  178 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG  178 (353)
                          .+.+..  .++|.|+.....
T Consensus        79 ----~~~~~~--~~~d~vi~~ag~   96 (264)
T PRK12829         79 ----TAVERF--GGLDVLVNNAGI   96 (264)
T ss_pred             ----HHHHHh--CCCCEEEECCCC
Confidence                112222  368999987543

>TIGR03855 NAD_NadX aspartate dehydrogenase

Probab=95.03  E-value=0.32  Score=46.04  Aligned_cols=90  Identities=18%  Similarity=0.130  Sum_probs=67.9

Q ss_pred             HHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeec-----ccchhHHhhhcCCeEeecCCchhHHHHh
Q 018600          160 VIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG-----GPFVLPLAHKHNIKILPADSEHSAIFQC  234 (353)
Q Consensus       160 l~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~a-----G~li~~~a~~~~~~IlPVDSEHsAIfQ~  234 (353)
                      +.+++. +++|.|+.+-.=.+=-.-...++++||.+..   |+..+-     ..-+.+.++++|.++..- |-+-+.++.
T Consensus        30 ~~eLl~-~~vDaVviatp~~~H~e~a~~aL~aGkhVl~---~s~gAlad~e~~~~l~~aA~~~g~~l~i~-sGai~g~d~  104 (229)
T TIGR03855        30 FDEFLP-EDVDIVVEAASQEAVKEYAEKILKNGKDLLI---MSVGALADRELRERLREVARSSGRKVYIP-SGAIGGLDA  104 (229)
T ss_pred             HHHHhc-CCCCEEEECCChHHHHHHHHHHHHCCCCEEE---ECCcccCCHHHHHHHHHHHHhcCCEEEEC-hHHHHHHHH
Confidence            344444 4699999987777777778999999999988   665432     344677888998887644 777777889


Q ss_pred             hcCCCCCCcceEEEEecCCc
Q 018600          235 IQGLPEGALRRIILTASGGA  254 (353)
Q Consensus       235 L~g~~~~~v~kIiLTASGGP  254 (353)
                      |+..+...++.+.+|..=.|
T Consensus       105 l~a~~ig~~~~V~i~~~k~p  124 (229)
T TIGR03855       105 LKAASLGRIERVVLTTTKPP  124 (229)
T ss_pred             HHhcccCCceEEEEEEecCh
Confidence            98777788999999976444

Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=94.94  E-value=0.077  Score=48.54  Aligned_cols=52  Identities=21%  Similarity=0.382  Sum_probs=41.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----CCHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----SNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----sNv~lL~~Q~~eFkPk~V~i  131 (353)
                      ||.|+|+||+||+...+-+.+.  .++|++++-.    .|.+.+.+.++..+|++|+-
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPE--GRVVVALTSSQLDLTDPEALERLLRAIRPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEE
Confidence            5899999999999999988875  6888887532    25567777777778898874

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK06101 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.23  Score=44.73  Aligned_cols=65  Identities=22%  Similarity=0.203  Sum_probs=43.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL  144 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l  144 (353)
                      |+++.|.|+||.||.+..+-+.+.  .++|+.+  .+|.+.+.+...+...-.....|-...+.+++.+
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   65 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIAC--GRNQSVLDELHTQSANIFTLAFDVTDHPGTKAAL   65 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEE--ECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHH
Confidence            478999999999999988888765  5777764  3577777666554322222334555555555543

>PRK09186 flagellin modification protein A; Provisional

Probab=94.87  E-value=0.28  Score=43.92  Aligned_cols=65  Identities=18%  Similarity=0.217  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-----CCEEE-EeCccchHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-----PQVVA-VRNESLLDEIKEAL  144 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk-----Pk~V~-i~de~~~~~l~~~l  144 (353)
                      .|++.|.|+||.||....+.+.+.  .++|+.+  .++-+.+.+..++.+     ....+ ..|-...+.+.+.+
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~--g~~v~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEA--GGIVIAA--DIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFL   74 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEE--ecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHH
Confidence            378999999999999999999875  5788776  345555554444432     22323 44555555555443

>PRK12828 short chain dehydrogenase; Provisional

Probab=94.79  E-value=0.31  Score=42.66  Aligned_cols=42  Identities=21%  Similarity=0.343  Sum_probs=31.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      .|++.|.|+||+||....+-+.+.  .++|++++  +|.+.+.+..
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~--r~~~~~~~~~   48 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAAR--GARVALIG--RGAAPLSQTL   48 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEe--CChHhHHHHH
Confidence            468999999999999999988765  67877765  4444444433

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.79  E-value=0.3  Score=48.62  Aligned_cols=32  Identities=31%  Similarity=0.483  Sum_probs=27.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .++|.|.|+||.||+...+-+.+.  .++|++++
T Consensus        60 ~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~   91 (390)
T PLN02657         60 DVTVLVVGATGYIGKFVVRELVRR--GYNVVAVA   91 (390)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEE
Confidence            457999999999999999988764  68899886

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.76  E-value=0.21  Score=44.55  Aligned_cols=83  Identities=22%  Similarity=0.220  Sum_probs=51.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+.+-+.++  .++|+.+.. +|-+++.+   +++....+...+ .|....+.++..+.      
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYA-RSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFA------   74 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcC-CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH------
Confidence            368999999999999999999886  567765433 44555444   444444444433 45555555554432      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.+  ....+|+|++..
T Consensus        75 -------~~~~--~~~~id~vi~~a   90 (250)
T PRK08063         75 -------QIDE--EFGRLDVFVNNA   90 (250)
T ss_pred             -------HHHH--HcCCCCEEEECC
Confidence                   1111  124588888874

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=94.73  E-value=0.23  Score=48.62  Aligned_cols=96  Identities=20%  Similarity=0.328  Sum_probs=64.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCcc-chHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~-~~~~l~~~l~~~~~~~~v~  154 (353)
                      -.+|.|.|+||.+|+-++++.+..  .+.+++.+..+  ++.. .++++..+++.-..+. ..+.+++            
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~--G~~~v~~~~s~--~k~~-~~~~lGAd~vi~y~~~~~~~~v~~------------  205 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKAL--GATVVAVVSSS--EKLE-LLKELGADHVINYREEDFVEQVRE------------  205 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHc--CCcEEEEecCH--HHHH-HHHhcCCCEEEcCCcccHHHHHHH------------
Confidence            468999999999999999999987  34677766554  5555 8899999998864433 2333333            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                              +.....+|+|++. +|-.-+...+.+++.+-++..
T Consensus       206 --------~t~g~gvDvv~D~-vG~~~~~~~l~~l~~~G~lv~  239 (326)
T COG0604         206 --------LTGGKGVDVVLDT-VGGDTFAASLAALAPGGRLVS  239 (326)
T ss_pred             --------HcCCCCceEEEEC-CCHHHHHHHHHHhccCCEEEE
Confidence                    2222357777776 444555556666666655443

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.73  E-value=0.41  Score=41.96  Aligned_cols=65  Identities=18%  Similarity=0.141  Sum_probs=40.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      +|+|.|.|+||.||.+..+-+.+.  .++|+.++ +++-+.   +.+..++..++...+ .|-...+.+++.
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   74 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARA--GADVVVHY-RSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAA   74 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEe-CCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHH
Confidence            578999999999999999988875  45665544 444443   444444444443332 344444444443

>PRK07024 short chain dehydrogenase; Provisional

Probab=94.70  E-value=0.48  Score=43.00  Aligned_cols=45  Identities=16%  Similarity=0.197  Sum_probs=35.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      +|++.|.|+||.||++..+.+.+.  .++|+.+  .+|.+.+.+...+.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~--~r~~~~~~~~~~~~   46 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQ--GATLGLV--ARRTDALQAFAARL   46 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHhc
Confidence            468999999999999999999876  5677654  35677777666654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.70  E-value=0.34  Score=42.96  Aligned_cols=82  Identities=18%  Similarity=0.152  Sum_probs=49.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC--CCE-EEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK--PQV-VAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk--Pk~-V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .|++.|.|+||.||.+..+.+.+.  .++|+++.  +|-+.+.++..+.+  .+. +...|-...+.++..+.       
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   73 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAE--GARVVVTD--RNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVA-------   73 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH-------
Confidence            368999999999999999998876  56776653  44555555554433  222 22334444445544331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            .+.  .....+|.|++..
T Consensus        74 ------~~~--~~~~~~d~vi~~a   89 (251)
T PRK07231         74 ------AAL--ERFGSVDILVNNA   89 (251)
T ss_pred             ------HHH--HHhCCCCEEEECC
Confidence                  111  1234688888875

>PRK06057 short chain dehydrogenase; Provisional

Probab=94.60  E-value=0.37  Score=43.58  Aligned_cols=62  Identities=13%  Similarity=0.039  Sum_probs=41.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      .|+|.|.|+||.||.+..+-+.++  .++|+.+.  +|-+.+.+...+++..+ ...|-...+.++.
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~   68 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAE--GATVVVGD--IDPEAGKAAADEVGGLF-VPTDVTDEDAVNA   68 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHcCCcE-EEeeCCCHHHHHH
Confidence            367999999999999999998876  57777664  45555555555554433 3334444444444

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=94.54  E-value=0.35  Score=43.59  Aligned_cols=63  Identities=21%  Similarity=0.200  Sum_probs=40.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      |++.|.|+||+||....+-+.+.  .++|+.+  .+|-+.+.++..+.   .++...+ .|-...+.+++.
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~   77 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQA--GAEVILN--GRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAA   77 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHc--CCEEEEE--eCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHH
Confidence            67999999999999999988774  6888765  34555554444333   3333332 344444444443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.46  E-value=0.44  Score=42.69  Aligned_cols=66  Identities=15%  Similarity=0.180  Sum_probs=42.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+...+.++  .++|+.+.-.. ..+.+.+++++..++... ..|-...+.+++.
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   74 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAG   74 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHH
Confidence            478999999999999999999876  46777553211 134455555555554433 3455555555544

>PLN02583 cinnamoyl-CoA reductase

Probab=94.46  E-value=0.26  Score=46.41  Aligned_cols=34  Identities=18%  Similarity=0.318  Sum_probs=28.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ..|+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R   38 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQ   38 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEc
Confidence            3568999999999999999988864  689998763

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=94.43  E-value=0.45  Score=42.46  Aligned_cols=64  Identities=14%  Similarity=0.166  Sum_probs=40.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      +|++.|.|+||.||......+.+.  .++|+. +..+|.+.+.+   +++++.++...+ .|-...+.+++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~--g~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   69 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAAR--GWSVGI-NYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIA   69 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHC--CCEEEE-EeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHH
Confidence            478999999999999999998875  577754 44566665544   444444444333 34333344443

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=94.42  E-value=0.13  Score=47.11  Aligned_cols=32  Identities=25%  Similarity=0.394  Sum_probs=27.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|.|.|+||+||...++-+.+....++|+++.
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~   32 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLD   32 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEec
Confidence            58999999999999999887765458898875

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK06701 short chain dehydrogenase; Provisional

Probab=94.40  E-value=0.67  Score=43.63  Aligned_cols=65  Identities=14%  Similarity=0.083  Sum_probs=39.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--HHHHHHHHHhhCCCEEE-EeCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--ITLLADQVKRFKPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN--v~lL~~Q~~eFkPk~V~-i~de~~~~~l~~~  143 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+..+.+  .+.+.+.++....+... ..|-...+.+.+.
T Consensus        47 k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~  114 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDA  114 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            68999999999999999988876  577765544322  33444444433334333 2344444444443

>PRK06196 oxidoreductase; Provisional

Probab=94.35  E-value=0.43  Score=45.16  Aligned_cols=63  Identities=14%  Similarity=0.177  Sum_probs=41.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.+.+.+--.+...|-...+.+++
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~--~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~   88 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQA--GAHVIVP--ARRPDVAREALAGIDGVEVVMLDLADLESVRA   88 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhhhCeEEEccCCCHHHHHH
Confidence            478999999999999999988875  5777764  35677776665554311122234444444443

>PRK05717 oxidoreductase; Validated

Probab=94.28  E-value=0.55  Score=42.45  Aligned_cols=62  Identities=11%  Similarity=0.050  Sum_probs=40.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EeCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~  142 (353)
                      |++.|.|+||+||..+..-+.+.  .++|+.+.  ++.+.+.+.++++..+... -.|-...+.+++
T Consensus        11 k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   73 (255)
T PRK05717         11 RVALVTGAARGIGLGIAAWLIAE--GWQVVLAD--LDRERGSKVAKALGENAWFIAMDVADEAQVAA   73 (255)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHc--CCEEEEEc--CCHHHHHHHHHHcCCceEEEEccCCCHHHHHH
Confidence            67999999999999999988875  56777653  4555555655555443322 234333344443

>PRK07454 short chain dehydrogenase; Provisional

Probab=94.26  E-value=0.66  Score=41.37  Aligned_cols=45  Identities=16%  Similarity=0.180  Sum_probs=33.6

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      ..+|++.|.|+||.||....+-+.+.  .++|+.+.  +|-+.+.+..+
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~   48 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKA--GWDLALVA--RSQDALEALAA   48 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHH
Confidence            35689999999999999999998875  56777764  55555544433

>PRK05693 short chain dehydrogenase; Provisional

Probab=94.26  E-value=0.56  Score=42.95  Aligned_cols=40  Identities=18%  Similarity=0.197  Sum_probs=31.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~  119 (353)
                      ||++.|.|+||.||....+.+.+.  .++|++++  +|-+.+.+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~   40 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATA--RKAEDVEA   40 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHH
Confidence            578999999999999999998865  68888764  44454443

>PRK07825 short chain dehydrogenase; Provisional

Probab=94.24  E-value=0.61  Score=42.62  Aligned_cols=80  Identities=15%  Similarity=0.063  Sum_probs=51.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-CCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-PQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk-Pk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .|++.|.|+||.||......+.+.  .++|+.+  .+|.+.+.+..++.. ..+ ...|-...+.+.+.+.         
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~--G~~v~~~--~r~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~---------   70 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAAL--GARVAIG--DLDEALAKETAAELGLVVG-GPLDVTDPASFAAFLD---------   70 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhccceE-EEccCCCHHHHHHHHH---------
Confidence            367999999999999999988875  5676654  367888877666654 333 2334444444444331         


Q ss_pred             ecHHHHHHHhcCCCCcEEEEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                          .+.+.  ..++|++|+.
T Consensus        71 ----~~~~~--~~~id~li~~   85 (273)
T PRK07825         71 ----AVEAD--LGPIDVLVNN   85 (273)
T ss_pred             ----HHHHH--cCCCCEEEEC
Confidence                12221  2468888886

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=94.22  E-value=0.12  Score=48.72  Aligned_cols=51  Identities=27%  Similarity=0.444  Sum_probs=38.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--------CCHHHHHHHHHhhCCCEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--------SNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--------sNv~lL~~Q~~eFkPk~V~  130 (353)
                      +||.|.|+||+||+...+-+.+..   +|+++.-.        .+.+.+.+..++.+|+.|+
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vi   59 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHSTDYCGDFSNPEGVAETVRKIRPDVIV   59 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC---CEEEeccccccccCCCCCHHHHHHHHHhcCCCEEE
Confidence            369999999999999998776543   47776532        2445677777777899877

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.19  E-value=0.12  Score=43.78  Aligned_cols=36  Identities=17%  Similarity=0.421  Sum_probs=32.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      .||+|.|+||=.|+...+.+.++|+ |++++....++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~-~~lv~~v~~~~   36 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPG-FELVGAVDRKP   36 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTT-EEEEEEEETTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC-cEEEEEEecCC
Confidence            3799999999999999999999765 99999988877

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=94.17  E-value=0.12  Score=50.33  Aligned_cols=49  Identities=14%  Similarity=0.250  Sum_probs=39.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      +||+|+|+||.+|..+...+...+-.++|+.+.-..+.++|..+..++.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~   49 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIY   49 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhh
Confidence            4799999999999999999998877778998877666677766665543

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=94.14  E-value=0.057  Score=53.22  Aligned_cols=32  Identities=34%  Similarity=0.623  Sum_probs=29.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      +.||+|+|+||.+|...++.+.+||+ ++|+++
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~-~el~~~   34 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPW-FEVTAL   34 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCC-ceEEEE
Confidence            46899999999999999999999986 799998

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=94.14  E-value=0.076  Score=52.85  Aligned_cols=39  Identities=18%  Similarity=0.397  Sum_probs=33.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCCH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSNI  114 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaagsNv  114 (353)
                      .+.||+|+|+||.+|...++++.+  ||. ++++.|+..++.
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~-~~l~~las~rsa   46 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPY-SSLKMLASARSA   46 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCc-ceEEEEEccCCC
Confidence            346899999999999999999998  775 899999877664

>PRK08226 short chain dehydrogenase; Provisional

Probab=94.13  E-value=0.52  Score=42.61  Aligned_cols=66  Identities=20%  Similarity=0.211  Sum_probs=40.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE-EEeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV-AVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V-~i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||....+-+.+.  .++|+.++-+.+.+.+.+...+...+.. ...|-...++++..
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   72 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARH--GANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAA   72 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHH
Confidence            378999999999999999998876  5777766533332233333333333332 23454444455443

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=94.13  E-value=0.33  Score=43.18  Aligned_cols=44  Identities=27%  Similarity=0.456  Sum_probs=33.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      +++.|+|+||.||..+...+.++  ..+|+.+  ++|.+++.+.+.++
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~--g~~V~l~--~R~~~~~~~l~~~l   72 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLARE--GARVVLV--GRDLERAQKAADSL   72 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHH
Confidence            67999999999999998888875  3566654  46778777666554

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.13  E-value=0.56  Score=42.72  Aligned_cols=65  Identities=12%  Similarity=0.081  Sum_probs=45.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+ .+++.+.+.++.++...+...+ .|-...+.+++.
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~--G~~vv~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKA--GADIVGV-GVAEAPETQAQVEALGRKFHFITADLIQQKDIDSI   73 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEe-cCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHH
Confidence            378999999999999999988875  6788765 4555666777777666554433 354444445443

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=94.10  E-value=0.51  Score=42.57  Aligned_cols=51  Identities=20%  Similarity=0.186  Sum_probs=34.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV  128 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~  128 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-....+.+.++......+.
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~   58 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSELVHEVAAELRAAGGEA   58 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchHHHHHHHHHHhcCCeE
Confidence            368999999999999999988875  577876543222334444444444443

>PRK12743 oxidoreductase; Provisional

Probab=94.09  E-value=0.47  Score=42.99  Aligned_cols=64  Identities=19%  Similarity=0.102  Sum_probs=41.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH---HHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT---LLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~---lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      +|++.|.|+||.||..+...+.+.  .++|+.+. .++.+   .+.++++++..+...+ .|-...+.++.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   69 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQ--GFDIGITW-HSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQ   69 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe-CCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            468999999999999999999886  67886654 33444   4455555555444433 34444444443

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=94.09  E-value=0.18  Score=53.91  Aligned_cols=86  Identities=14%  Similarity=0.162  Sum_probs=49.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHH-hCCCceEEEEEeecCCHHHHHHHHHhhC--CCE-EEEeCccchHHHHHHhhcCCC
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAAGSNITLLADQVKRFK--PQV-VAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaagsNv~lL~~Q~~eFk--Pk~-V~i~de~~~~~l~~~l~~~~~  149 (353)
                      =.-|+|.|-|+|||||.....-+. .+|.+..+..-.=. |...+....++..  .+. ..+.|-..++.+...+.+  +
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~-~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~--~  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEY-KLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG--H  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchH-HHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc--C
Confidence            345899999999999999876555 45666555442211 2333333333321  233 335666667777776653  3


Q ss_pred             CcEEEecHHHHHH
Q 018600          150 KPEILAGEQGVIE  162 (353)
Q Consensus       150 ~~~v~~G~~gl~~  162 (353)
                      ++++.+-..++..
T Consensus       325 kvd~VfHAAA~KH  337 (588)
T COG1086         325 KVDIVFHAAALKH  337 (588)
T ss_pred             CCceEEEhhhhcc
Confidence            4556666555443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.06  E-value=0.36  Score=46.23  Aligned_cols=35  Identities=29%  Similarity=0.346  Sum_probs=29.2

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |.+ |+|.|.|+||+||....+-+.+.  .++|++++-
T Consensus         2 ~~~-k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r   36 (349)
T TIGR02622         2 WQG-KKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSL   36 (349)
T ss_pred             cCC-CEEEEECCCChhHHHHHHHHHHC--CCEEEEEeC
Confidence            444 67999999999999999999875  578998863

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.06  E-value=0.69  Score=41.18  Aligned_cols=64  Identities=14%  Similarity=0.143  Sum_probs=40.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh--CCCEE-EEeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF--KPQVV-AVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF--kPk~V-~i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||.+..+-+.+.  .++|+.+.  +|.+.+.+...+.  +.+.. ...|-...+.+++.
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   71 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFARE--GARVVVAD--RDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEAL   71 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEec--CCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            468999999999999999988875  57777664  4555555444443  22222 22344444455543

>PRK08265 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.62  Score=42.60  Aligned_cols=64  Identities=16%  Similarity=0.054  Sum_probs=44.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++..+..+ ..|-...+.+++.
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   70 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAA--GARVAIV--DIDADNGAAVAASLGERARFIATDITDDAAIERA   70 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHH
Confidence            368999999999999999998875  5777665  35667677777766544333 2354444455443

>PRK06500 short chain dehydrogenase; Provisional

Probab=94.03  E-value=0.71  Score=41.03  Aligned_cols=48  Identities=21%  Similarity=0.219  Sum_probs=36.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV  128 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~  128 (353)
                      |++.|.|+||.||....+-+.+.  .++|+.+  .+|.+.+.+..+++..+.
T Consensus         7 k~vlItGasg~iG~~la~~l~~~--g~~v~~~--~r~~~~~~~~~~~~~~~~   54 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAE--GARVAIT--GRDPASLEAARAELGESA   54 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEe--cCCHHHHHHHHHHhCCce
Confidence            68999999999999999998876  4677665  456677777666665443

>PRK06182 short chain dehydrogenase; Validated

Probab=94.01  E-value=0.66  Score=42.49  Aligned_cols=83  Identities=19%  Similarity=0.229  Sum_probs=50.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .|++.|.|+||.||....+.+.+.  .++|++++  +|.+.+.+... .+..++ ..|-...+.+.+.+.          
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~--G~~V~~~~--r~~~~l~~~~~-~~~~~~-~~Dv~~~~~~~~~~~----------   66 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQ--GYTVYGAA--RRVDKMEDLAS-LGVHPL-SLDVTDEASIKAAVD----------   66 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHh-CCCeEE-EeeCCCHHHHHHHHH----------
Confidence            478999999999999999988764  67888764  56676655432 233332 234444444443321          


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCcc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCA  180 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~a  180 (353)
                         .+.+  ....+|+||+. +|..
T Consensus        67 ---~~~~--~~~~id~li~~-ag~~   85 (273)
T PRK06182         67 ---TIIA--EEGRIDVLVNN-AGYG   85 (273)
T ss_pred             ---HHHH--hcCCCCEEEEC-CCcC
Confidence               1111  23468899887 3543

>PRK08628 short chain dehydrogenase; Provisional

Probab=94.01  E-value=0.57  Score=42.18  Aligned_cols=64  Identities=17%  Similarity=0.186  Sum_probs=40.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      |++.|.|+||.||......+.+.  .++|+.++-...-..+.+++++..++...+ .|-...+.++.
T Consensus         8 ~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRD   72 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            68999999999999999998876  456666543322224445555555554333 34444444444

>PRK12939 short chain dehydrogenase; Provisional

Probab=94.01  E-value=0.62  Score=41.33  Aligned_cols=45  Identities=16%  Similarity=0.094  Sum_probs=34.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||....+.+.+.  .++|+.+  .++-+.+.+...++
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~--~r~~~~~~~~~~~~   51 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEA--GATVAFN--DGLAAEARELAAAL   51 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHc--CCEEEEE--eCCHHHHHHHHHHH
Confidence            378999999999999999998875  5678776  35666655554443

>PRK07774 short chain dehydrogenase; Provisional

Probab=93.97  E-value=0.58  Score=41.74  Aligned_cols=64  Identities=23%  Similarity=0.194  Sum_probs=39.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEE-EeCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~  142 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.-.. +.+.+.+.+++..++... ..|-...+.++.
T Consensus         7 k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   72 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKA   72 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            67999999999999999998875  57888764321 222333334333334332 344444444444

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.94  E-value=0.69  Score=42.78  Aligned_cols=63  Identities=17%  Similarity=0.196  Sum_probs=40.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC---------HHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN---------ITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN---------v~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      |++.|.|+||.||.+..+-+.++  .++|+.+. +++         .+.+.+++++...+...+ .|-...+.++.
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARD--GANIVIAA-KTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEEe-cccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            68999999999999999998876  46777764 322         233445555544444433 44444444444

>PRK12827 short chain dehydrogenase; Provisional

Probab=93.91  E-value=0.61  Score=41.20  Aligned_cols=65  Identities=9%  Similarity=0.107  Sum_probs=40.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe--ecCCHHHHHHHHHhh---CCCEEE-EeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA--AGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa--agsNv~lL~~Q~~eF---kPk~V~-i~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||.....-+.++  .++|+.+.  ..++.+.+.+...++   ..+... ..|-...+.++.
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   76 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRA   76 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            367999999999999999888876  56777764  234555555444444   334322 234444444443

>PRK06482 short chain dehydrogenase; Provisional

Probab=93.90  E-value=0.77  Score=41.99  Aligned_cols=62  Identities=15%  Similarity=0.150  Sum_probs=39.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EeCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~  142 (353)
                      |++.|.|+||.||.....-+.+.  .++|+++.  +|.+.+.+...++..+... -.|-...+.+++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   65 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLAR--GDRVAATV--RRPDALDDLKARYGDRLWVLQLDVTDSAAVRA   65 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHhccCceEEEEccCCCHHHHHH
Confidence            67999999999999999888765  46676654  4556665554444433322 234333444444

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=93.89  E-value=0.051  Score=47.64  Aligned_cols=38  Identities=26%  Similarity=0.396  Sum_probs=31.8

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~  118 (353)
                      |.|+|+||+||....+-+.+.  .++|++++.+++-+.+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~   38 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFE   38 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccc
Confidence            789999999999999999876  56788998888766543

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=93.88  E-value=0.68  Score=40.98  Aligned_cols=83  Identities=13%  Similarity=0.115  Sum_probs=49.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEE-EEeCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVV-AVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e---FkPk~V-~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      ||.+.|.|+||.||.+..+.+.+.  .++|+.+. .+|.+.+.+...+   ...+.. .-.|-...+.+++.+.      
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~------   71 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQE--GYTVAVNY-QQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFT------   71 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe-CCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHH------
Confidence            478999999999999999998865  57776543 4455555444433   333322 2234444444444332      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.+  ....+|.|++..
T Consensus        72 -------~~~~--~~~~id~vi~~a   87 (247)
T PRK09730         72 -------AIDQ--HDEPLAALVNNA   87 (247)
T ss_pred             -------HHHH--hCCCCCEEEECC
Confidence                   1111  234688898884

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=93.88  E-value=0.13  Score=50.44  Aligned_cols=51  Identities=22%  Similarity=0.423  Sum_probs=43.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC----CHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS----NITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags----Nv~lL~~Q~~eFkPk~V~i  131 (353)
                      +|.|+|+||-.|+...+.+.   .+|+|++++-..    |.+.+.+.+++.+|+.|+=
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~---~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PDvVIn   56 (281)
T COG1091           2 KILITGANGQLGTELRRALP---GEFEVIATDRAELDITDPDAVLEVIRETRPDVVIN   56 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC---CCceEEeccCccccccChHHHHHHHHhhCCCEEEE
Confidence            39999999999998887766   579999998665    6688999999999999873

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.86  E-value=0.79  Score=40.17  Aligned_cols=83  Identities=17%  Similarity=0.088  Sum_probs=49.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e---FkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|+|.|.|+||.||....+.+.+.  .++|+.++  +|-+.+.+...+   ...+...+ .|-...+.+...+.      
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAAD--GAKVVIYD--SNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIE------   74 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH------
Confidence            368999999999999999998876  56665554  444444444433   33444333 34443444444332      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEecc
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIV  177 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIv  177 (353)
                             ++.+.  ...+|.|+....
T Consensus        75 -------~~~~~--~~~id~vi~~ag   91 (246)
T PRK05653         75 -------AAVEA--FGALDILVNNAG   91 (246)
T ss_pred             -------HHHHH--hCCCCEEEECCC
Confidence                   22221  245888888753

>PRK08263 short chain dehydrogenase; Provisional

Probab=93.85  E-value=0.88  Score=41.82  Aligned_cols=48  Identities=25%  Similarity=0.297  Sum_probs=35.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ  127 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk  127 (353)
                      .|+|.|.|+||.||.++.+-+.+.  .++|+.+.  +|-+.+.+...++..+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~--r~~~~~~~~~~~~~~~   50 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALER--GDRVVATA--RDTATLADLAEKYGDR   50 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHhccCC
Confidence            368999999999999999988765  57777654  5666676666655433

>CHL00194 ycf39 Ycf39; Provisional

Probab=93.76  E-value=0.34  Score=45.96  Aligned_cols=30  Identities=27%  Similarity=0.556  Sum_probs=26.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|.|+|+||+||+..++-+.+.  .++|++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~   31 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDE--GYQVRCLV   31 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHC--CCeEEEEE
Confidence            6999999999999999888865  58999987

>PRK08643 acetoin reductase; Validated

Probab=93.75  E-value=0.71  Score=41.55  Aligned_cols=43  Identities=21%  Similarity=0.227  Sum_probs=31.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      |.+.|.|+||.||.++...+.+.  .++|+.+.  ++-+.+.+...+
T Consensus         3 k~~lItGas~giG~~la~~l~~~--G~~v~~~~--r~~~~~~~~~~~   45 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVED--GFKVAIVD--YNEETAQAAADK   45 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            67999999999999999999876  57887764  344444444333

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.75  E-value=0.094  Score=51.47  Aligned_cols=37  Identities=27%  Similarity=0.459  Sum_probs=31.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaagsN  113 (353)
                      ++||+|+||||.+|...++.+.+  ||. |++++++..++
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~-~~l~~l~s~~~   39 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPV-DKLRLLASARS   39 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCc-ceEEEEEcccc
Confidence            35899999999999999999998  665 89999976654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=93.71  E-value=0.72  Score=41.95  Aligned_cols=45  Identities=18%  Similarity=0.222  Sum_probs=33.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||.+..+-+.+.  .++|+.+  .+|-+.+.+....+
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~l~~~~   49 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAE--GARVAVL--DKSAAGLQELEAAH   49 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHhhc
Confidence            478999999999999999988876  6778765  35556655544433

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06180 short chain dehydrogenase; Provisional

Probab=93.69  E-value=0.89  Score=41.94  Aligned_cols=63  Identities=17%  Similarity=0.127  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      +|++.|.|+||.||..+..-+.+.  .++|+++.  +|-+.+.+.......+...+ .|-...+.+..
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~   67 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAA--GHRVVGTV--RSEAARADFEALHPDRALARLLDVTDFDAIDA   67 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhC--cCEEEEEe--CCHHHHHHHHhhcCCCeeEEEccCCCHHHHHH
Confidence            478999999999999999988775  57787764  56677766655554444332 24333444443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.64  E-value=0.91  Score=40.43  Aligned_cols=65  Identities=12%  Similarity=0.163  Sum_probs=42.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+. .++.+.+.+...++..+..++ .|-...+.+++.
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   70 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFARE--GARVVVNY-HQSEDAAEALADELGDRAIALQADVTDREQVQAM   70 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEc-CCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHH
Confidence            368999999999999999988765  57787544 444566666566665554333 344444444443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=93.64  E-value=0.9  Score=41.02  Aligned_cols=62  Identities=19%  Similarity=0.168  Sum_probs=42.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      |++.|.|+||.||......+.++  .++|+.+  .+|.+.+.+...+...+...+ .|-...+.+++
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~--G~~v~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAE--GARVVIA--DIKPARARLAALEIGPAAIAVSLDVTRQDSIDR   69 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHc--CCEEEEE--cCCHHHHHHHHHHhCCceEEEEccCCCHHHHHH
Confidence            67999999999999999999876  5777765  356777776666655443332 23333334443

>PRK07814 short chain dehydrogenase; Provisional

Probab=93.64  E-value=0.66  Score=42.35  Aligned_cols=63  Identities=16%  Similarity=0.126  Sum_probs=39.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||.++.+-+.+.  .++|+.+.  ++-+.   +.++.+....+..++ .|-...+.+..
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~--r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   76 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEA--GADVLIAA--RTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAG   76 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            468999999999999999998875  57887764  33444   444444333333222 34444444443

>PRK06194 hypothetical protein; Provisional

Probab=93.61  E-value=0.88  Score=41.76  Aligned_cols=64  Identities=17%  Similarity=0.184  Sum_probs=40.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||....+-+.+.  .++|+.+.  ++.+.+.+...+.   ..+..++ .|-...+.+.+.
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   73 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAAL--GMKLVLAD--VQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEAL   73 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            478999999999999999988876  56776553  4555555554443   3444333 344444445443

>PRK09135 pteridine reductase; Provisional

Probab=93.57  E-value=0.79  Score=40.48  Aligned_cols=41  Identities=15%  Similarity=0.127  Sum_probs=31.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q  120 (353)
                      +++.|.|+||.||.+..+-+.+.  .++|+++. +++.+.+.+.
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~-r~~~~~~~~~   47 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAA--GYRVAIHY-HRSAAEADAL   47 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHH
Confidence            67999999999999999998876  68888775 4443444333

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=93.56  E-value=0.55  Score=46.87  Aligned_cols=139  Identities=18%  Similarity=0.189  Sum_probs=83.8

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        72 ~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      .+...++|.|+|++|.+|+.++++.+...  |..+.-++..+-..|   ++++..+.++=.++..+   .+..       
T Consensus       154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~--~~~v~t~~s~e~~~l---~k~lGAd~vvdy~~~~~---~e~~-------  218 (347)
T KOG1198|consen  154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAG--AIKVVTACSKEKLEL---VKKLGADEVVDYKDENV---VELI-------  218 (347)
T ss_pred             ccCCCCeEEEEeCCcHHHHHHHHHHHhcC--CcEEEEEcccchHHH---HHHcCCcEeecCCCHHH---HHHH-------
Confidence            56667899999999999999999999874  566666666555444   67777777764433211   1111       


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHH
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAI  231 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAI  231 (353)
                               .... ...+|+|++.+.|. -+......+..+.+.+     -+...|......-..        |     .
T Consensus       219 ---------kk~~-~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~-----~i~~~~~~~~~~~~~--------~-----~  269 (347)
T KOG1198|consen  219 ---------KKYT-GKGVDVVLDCVGGS-TLTKSLSCLLKGGGGA-----YIGLVGDELANYKLD--------D-----L  269 (347)
T ss_pred             ---------Hhhc-CCCccEEEECCCCC-ccccchhhhccCCceE-----EEEeccccccccccc--------c-----c
Confidence                     1112 34699999998886 5555555555554433     334444443221110        1     1


Q ss_pred             HHhhcCCCCCCcceEEEEecCCcCCCCC
Q 018600          232 FQCIQGLPEGALRRIILTASGGAFRDWP  259 (353)
Q Consensus       232 fQ~L~g~~~~~v~kIiLTASGGPFr~~~  259 (353)
                      ||    . ...++...++..|.+|+...
T Consensus       270 ~~----~-~~~~~~~~~~~~~~~~~~~~  292 (347)
T KOG1198|consen  270 WQ----S-ANGIKLYSLGLKGVNYRWLY  292 (347)
T ss_pred             hh----h-hhhhhheeeeeeccceeeee
Confidence            22    1 23456677777777776544

>PRK06949 short chain dehydrogenase; Provisional

Probab=93.54  E-value=1.2  Score=39.80  Aligned_cols=43  Identities=19%  Similarity=0.267  Sum_probs=32.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      .|+|.|.|+||.||..+.+-+.+.  .++|+++.  +|-+.+.+...
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~--r~~~~~~~~~~   51 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQA--GAKVVLAS--RRVERLKELRA   51 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHH
Confidence            478999999999999999999875  57777664  34555444333

>PRK06181 short chain dehydrogenase; Provisional

Probab=93.54  E-value=0.82  Score=41.31  Aligned_cols=41  Identities=27%  Similarity=0.241  Sum_probs=30.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      +++.|.|+||.||.....-+.+.  .++|+++.  +|.+.+.+..
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~--r~~~~~~~~~   42 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARA--GAQLVLAA--RNETRLASLA   42 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHH
Confidence            57999999999999999888765  46888775  4444444333

>PRK07035 short chain dehydrogenase; Provisional

Probab=93.52  E-value=0.7  Score=41.47  Aligned_cols=43  Identities=16%  Similarity=0.200  Sum_probs=32.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      |++.|.|+||.||.....-+.+.  .++|+.+.  +|.+.+.++.++
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~--r~~~~~~~~~~~   51 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQ--GAHVIVSS--RKLDGCQAVADA   51 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            68999999999999999998876  56888775  455554444443

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=93.51  E-value=0.9  Score=41.26  Aligned_cols=63  Identities=17%  Similarity=0.210  Sum_probs=41.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|-+.+.+...+...+... ..|-...+.++.
T Consensus         6 ~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (263)
T PRK06200          6 GQVALITGGGSGIGRALVERFLAE--GARVAVL--ERSAEKLASLRQRFGDHVLVVEGDVTSYADNQR   69 (263)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCcceEEEccCCCHHHHHH
Confidence            468999999999999999998876  5677665  35666666666555433322 234343444443

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=93.51  E-value=1  Score=39.73  Aligned_cols=63  Identities=22%  Similarity=0.249  Sum_probs=40.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||.+..+-+.++  .+.|+. . .++.+.+.++..+...+... ..|-...+.+++
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~--g~~v~~-~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQ--GAIVGL-H-GTRVEKLEALAAELGERVKIFPANLSDRDEVKA   69 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEE-E-cCCHHHHHHHHHHhCCceEEEEccCCCHHHHHH
Confidence            468999999999999999888765  355544 3 35677777766655433322 234344444444

>PRK05866 short chain dehydrogenase; Provisional

Probab=93.50  E-value=1.4  Score=41.71  Aligned_cols=44  Identities=30%  Similarity=0.366  Sum_probs=33.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      |++.|.|+||-||....+.+.++  .++|+.++  +|.+.+.+...+.
T Consensus        41 k~vlItGasggIG~~la~~La~~--G~~Vi~~~--R~~~~l~~~~~~l   84 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARR--GATVVAVA--RREDLLDAVADRI   84 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHH
Confidence            68999999999999999999876  57777653  4566665554443

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=93.47  E-value=0.74  Score=45.82  Aligned_cols=110  Identities=21%  Similarity=0.200  Sum_probs=67.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCCHHHHHHHHH------hhCCCEEEEeCccchHHHHHHhhcCCC
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaagsNv~lL~~Q~~------eFkPk~V~i~de~~~~~l~~~l~~~~~  149 (353)
                      ||+|.|. |=||+..++++.+.+  ++|+|+++.--...+-++-..+      +|+. -|...+..        +.-.+.
T Consensus         1 ~IaInGf-GrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~-~v~~~~~~--------l~v~g~   70 (325)
T TIGR01532         1 RVAINGF-GRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPG-EVKVDGDC--------LHVNGD   70 (325)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCC-cEEEeCCE--------EEECCe
Confidence            5999999 999999999988764  5799999976555555544332      2211 11111111        000112


Q ss_pred             CcEEEecHHHHHHHh-cCCCCcEEEEeccCccCcHHHHHHHHcC-CcEeee
Q 018600          150 KPEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALA  198 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a-~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g-K~IaLA  198 (353)
                      .++++.- ....++- ...++|+|+.+...+.-.+-...++++| |.|-+.
T Consensus        71 ~i~v~~~-~~p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~S  120 (325)
T TIGR01532        71 CIRVLHS-PTPEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFS  120 (325)
T ss_pred             EEEEEEc-CChhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEec
Confidence            2333322 2233322 2247999999988888888888999999 544443

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=93.46  E-value=0.48  Score=43.27  Aligned_cols=39  Identities=23%  Similarity=0.342  Sum_probs=31.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~  118 (353)
                      +|+|.|+|+||.||...+.-+.+.  .++|++++  +|.+.+.
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~--R~~~~~~   55 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGV--RDVDKAK   55 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEe--cCHHHHH
Confidence            578999999999999999888775  58888875  4545443

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=93.45  E-value=0.11  Score=50.05  Aligned_cols=38  Identities=26%  Similarity=0.270  Sum_probs=30.6

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        71 ~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |-.-.+|+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~   47 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDN   47 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeC
Confidence            33334467999999999999999999876  578999863

>PRK08589 short chain dehydrogenase; Validated

Probab=93.44  E-value=0.8  Score=42.24  Aligned_cols=43  Identities=19%  Similarity=0.266  Sum_probs=31.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +| +.+.+.+.+
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~--r~-~~~~~~~~~   48 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQE--GAYVLAVD--IA-EAVSETVDK   48 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--Cc-HHHHHHHHH
Confidence            468999999999999999988876  57787764  34 444444433

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.39  E-value=0.13  Score=51.24  Aligned_cols=37  Identities=27%  Similarity=0.464  Sum_probs=31.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHH--hCCCceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVA--EHEDKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~--~~pd~F~VvaLaagsN  113 (353)
                      |.+|+|+||||.+|...++++.  .||. ++++.++..+.
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~-~~l~~v~s~~~   42 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPV-GTLHLLASSES   42 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCc-eEEEEEECccc
Confidence            4689999999999999999999  6775 88888876543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=93.38  E-value=0.95  Score=41.06  Aligned_cols=64  Identities=19%  Similarity=0.161  Sum_probs=41.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      |.+.|.|+||.||..+.+-+.+.  .++|+++. .+.-+.+.+++++...+...+ .|-...++++..
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   75 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEA--GCDIVGIN-IVEPTETIEQVTALGRRFLSLTADLRKIDGIPAL   75 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEec-CcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            68999999999999999988875  67888764 333355555665544444333 344444444443

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=93.37  E-value=0.93  Score=40.09  Aligned_cols=44  Identities=16%  Similarity=0.055  Sum_probs=32.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      .|+|.|.|+||.||.....-+.++  .++|++++  +|.+.+.+...+
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~--r~~~~~~~~~~~   49 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAAD--GAEVIVVD--ICGDDAAATAEL   49 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            468999999999999998887765  57887764  454544444443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=93.36  E-value=0.35  Score=51.01  Aligned_cols=36  Identities=22%  Similarity=0.446  Sum_probs=30.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .+|+|.|.|+||+||+..++-+.+....++|+++.-
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~   40 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDK   40 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeC
Confidence            357899999999999999998887644689998864

>PRK07890 short chain dehydrogenase; Provisional

Probab=93.32  E-value=0.82  Score=40.96  Aligned_cols=43  Identities=21%  Similarity=0.118  Sum_probs=31.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      .|++.|.|+||.||.++..-+.+.  .++|+.+.  +|-+.+.+...
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~   47 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARA--GADVVLAA--RTAERLDEVAA   47 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHH
Confidence            478999999999999999988875  56777654  34444444333

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=93.32  E-value=0.95  Score=40.08  Aligned_cols=107  Identities=26%  Similarity=0.344  Sum_probs=64.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH------hhCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~------eFkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      ||+|.|. |-||+..++.+.+.| +++++++..-.+.+-++-+.+      .|++. +...+..        +.-.+..+
T Consensus         2 kv~I~G~-GriGr~v~~~~~~~~-~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~-v~~~~~~--------l~i~g~~i   70 (149)
T smart00846        2 KVGINGF-GRIGRLVLRALLERP-DIEVVAINDLTDPETLAHLLKYDSVHGRFPGE-VEVDEDG--------LIVNGKKI   70 (149)
T ss_pred             EEEEECc-CHHHHHHHHHHHhCC-CCEEEEeecCCCHHHHHHHhcccCCCCCCCCc-EEEeCCE--------EEECCEEE
Confidence            6999998 999999999998765 599999876567777777665      22222 2221111        11012223


Q ss_pred             EEEecHHHHHHHh-cCCCCcEEEEeccCccCcHHHH-HHHHcC-CcEee
Q 018600          152 EILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTV-AAIEAG-KDIAL  197 (353)
Q Consensus       152 ~v~~G~~gl~~~a-~~~~~D~Vv~AIvG~aGL~pT~-~Ai~~g-K~IaL  197 (353)
                      +++. +....++- ...++|+||.+ +|..+-+... .-+++| |+|.+
T Consensus        71 ~~~~-~~~p~~~~w~~~gvDiVie~-tG~f~~~~~~~~hl~~GakkVii  117 (149)
T smart00846       71 KVLA-ERDPANLPWKELGVDIVVEC-TGKFTTREKASAHLKAGAKKVII  117 (149)
T ss_pred             EEEe-cCChHHCcccccCCeEEEec-cccccchHHHHHHHHcCCCEEEe
Confidence            3332 22222221 23478999999 8887766654 456666 55543

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.26  E-value=0.88  Score=40.14  Aligned_cols=64  Identities=20%  Similarity=0.258  Sum_probs=39.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e---FkPk~V~i-~de~~~~~l~~  142 (353)
                      +|+|.|.|+||.||.....-..+.  .++|+.+. .++-+.+.+...+   ...+...+ .|-...+.++.
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKE--GAKVVIAY-DINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVEN   72 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            468999999999999999888765  57887662 3344444444433   23333222 34444444444

>PLN00016 RNA-binding protein; Provisional

Probab=93.22  E-value=0.53  Score=45.96  Aligned_cols=36  Identities=17%  Similarity=0.241  Sum_probs=30.1

Q ss_pred             CCeeEEEE----ecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           75 GPKPISVL----GSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        75 ~~k~I~IL----GSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      .+++|.|+    |+||.||.....-+.+.  .++|.+++-+.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~   90 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGK   90 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCC
Confidence            34789999    99999999999988765  58999988543

>PRK06172 short chain dehydrogenase; Provisional

Probab=93.21  E-value=0.95  Score=40.67  Aligned_cols=63  Identities=19%  Similarity=0.136  Sum_probs=39.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.   +.++.+++..+...+ .|-...+.+.+
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   73 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFARE--GAKVVVAD--RDAAGGEETVALIREAGGEALFVACDVTRDAEVKA   73 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            478999999999999999988875  46777653  34333   444455554443332 34433444443

>PRK09134 short chain dehydrogenase; Provisional

Probab=93.19  E-value=0.8  Score=41.48  Aligned_cols=65  Identities=22%  Similarity=0.251  Sum_probs=40.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~-i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+.+.+.  .++|+.+. .++-+.   +.+++++-.++... ..|-...+.+.+.
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   77 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAH--GFDVAVHY-NRSRDEAEALAAEIRALGRRAVALQADLADEAEVRAL   77 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe-CCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            368999999999999999998875  46777654 334443   33444333333322 2354445555543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=93.18  E-value=0.26  Score=51.98  Aligned_cols=52  Identities=17%  Similarity=0.190  Sum_probs=40.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEE-EEEeecCCHHHHHHHHHhhCCCEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRV-VALAAGSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~V-vaLaagsNv~lL~~Q~~eFkPk~V~  130 (353)
                      +||.|.|+||+||+...+.+.+.  .++| ++..--++.+.+.+.+.+++|++|+
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~--g~~v~~~~~~l~d~~~v~~~i~~~~pd~Vi  433 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQ--GIAYEYGKGRLEDRSSLLADIRNVKPTHVF  433 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhC--CCeEEeeccccccHHHHHHHHHhhCCCEEE
Confidence            57999999999999999988765  4666 3332235777788888889999987

>PRK12742 oxidoreductase; Provisional

Probab=93.18  E-value=0.56  Score=41.49  Aligned_cols=50  Identities=14%  Similarity=0.098  Sum_probs=36.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV  128 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~  128 (353)
                      .|++.|.|+||.||..+...+.+.  .++|+.+ ..++.+.+.+...+++.+.
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~--G~~v~~~-~~~~~~~~~~l~~~~~~~~   55 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTD--GANVRFT-YAGSKDAAERLAQETGATA   55 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEe-cCCCHHHHHHHHHHhCCeE
Confidence            368999999999999999988875  5677654 4456666666666665543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=93.14  E-value=0.86  Score=40.54  Aligned_cols=63  Identities=22%  Similarity=0.130  Sum_probs=39.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEE-EeCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~---eFkPk~V~-i~de~~~~~l~~~  143 (353)
                      |++.|.|+||+||....+-+.+.  .++|++++  +|.+.+.+...   ....+... ..|-...+.++..
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   68 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAA--GANVVVND--LGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADM   68 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            67999999999999999998875  56787764  34444443333   33333332 2354444445443

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=93.12  E-value=0.31  Score=46.44  Aligned_cols=31  Identities=26%  Similarity=0.342  Sum_probs=27.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |+|.|.|+||+||....+-+.+.  .++|+++.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~   31 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLI   31 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEe
Confidence            58999999999999999988775  57888875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=93.10  E-value=1.3  Score=41.97  Aligned_cols=46  Identities=11%  Similarity=0.282  Sum_probs=34.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      ..|++.|.|+||.||..+...+.+.  .++|+.+.  +|.+.+.+...+.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~--r~~~~~~~~~~~l   50 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKR--GWHVIMAC--RNLKKAEAAAQEL   50 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHh
Confidence            3578999999999999999988876  47776653  5666666555554

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=93.08  E-value=0.54  Score=48.83  Aligned_cols=56  Identities=16%  Similarity=0.219  Sum_probs=40.5

Q ss_pred             cccCCCCCCeeEEEEecCChHhHHHHHHHHhC-------CCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           68 TFRKTWDGPKPISVLGSTGSIGTQTLDIVAEH-------EDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        68 ~~~~~~~~~k~I~ILGSTGSIGtqTLdVI~~~-------pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      ...++|..|-||+|.|++|.||.+++-.+...       +---+++-+  ..|-+++.-++.++.
T Consensus        92 ~~~~~~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvli--D~~~~~a~G~amDL~  154 (444)
T PLN00112         92 EETKSWKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGS--ERSKQALEGVAMELE  154 (444)
T ss_pred             hhhhcCCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEE--cCCcchhHHHHHHHH
Confidence            34589999999999999999999999877654       222245533  457777777766553

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=93.07  E-value=1.1  Score=39.92  Aligned_cols=65  Identities=22%  Similarity=0.162  Sum_probs=40.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~---~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||....+-+.++  .++|+.+ ..++-+.+.+..   ++..++...+ .|-...+.+.+.
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   74 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQE--GAKVVIN-YNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRL   74 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEE-cCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            478999999999999999988876  5677654 344444444443   3333344333 344444444443

>PRK07060 short chain dehydrogenase; Provisional

Probab=93.06  E-value=0.73  Score=40.84  Aligned_cols=62  Identities=23%  Similarity=0.156  Sum_probs=42.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+...+.+.  .++|+.++  +|.+.+.+..++++... ...|-...+.+++
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~--r~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~   70 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQR--GARVVAAA--RNAAALDRLAGETGCEP-LRLDVGDDAAIRA   70 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhCCeE-EEecCCCHHHHHH
Confidence            368999999999999999999876  56777654  56677766666665443 3344444444443

>PRK12744 short chain dehydrogenase; Provisional

Probab=93.05  E-value=1.3  Score=40.13  Aligned_cols=64  Identities=16%  Similarity=0.172  Sum_probs=39.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--CCHH---HHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--SNIT---LLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--sNv~---lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      |++.|.|+||.||..+.+.+.+.  .++|+.+...  ++.+   .+.++.+.+.++...+ .|-...+.+++
T Consensus         9 k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   78 (257)
T PRK12744          9 KVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEK   78 (257)
T ss_pred             cEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHH
Confidence            68999999999999999999875  5677766543  2333   3334444444444332 34444444444

>PRK05867 short chain dehydrogenase; Provisional

Probab=93.04  E-value=1  Score=40.70  Aligned_cols=44  Identities=16%  Similarity=0.194  Sum_probs=33.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+...+.
T Consensus        10 k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~l   53 (253)
T PRK05867         10 KRALITGASTGIGKRVALAYVEA--GAQVAIA--ARHLDALEKLADEI   53 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHH
Confidence            67999999999999999999876  5677664  35556555554443

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=93.02  E-value=0.93  Score=41.29  Aligned_cols=46  Identities=17%  Similarity=0.211  Sum_probs=34.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+. .+.+|.+.+.+.+++.
T Consensus         8 ~k~vlItGas~gIG~~ia~~l~~~--G~~v~~-~~~~~~~~~~~~~~~~   53 (260)
T PRK08416          8 GKTLVISGGTRGIGKAIVYEFAQS--GVNIAF-TYNSNVEEANKIAEDL   53 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEE-EcCCCHHHHHHHHHHH
Confidence            478999999999999999988875  566654 4566777666555443

>PRK07831 short chain dehydrogenase; Provisional

Probab=92.99  E-value=1.8  Score=39.34  Aligned_cols=42  Identities=26%  Similarity=0.264  Sum_probs=30.3

Q ss_pred             CeeEEEEecCCh-HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           76 PKPISVLGSTGS-IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        76 ~k~I~ILGSTGS-IGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      .|++.|.|+||| ||..+..-+.+.  .++|+...  +|.+.+.+..
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~--~~~~~~~~~~   59 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEE--GARVVISD--IHERRLGETA   59 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHH
Confidence            478999999996 999999998876  46666543  4555554443

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=92.97  E-value=0.99  Score=43.13  Aligned_cols=95  Identities=12%  Similarity=0.034  Sum_probs=62.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .++|.|.|+ |+||..++.+.+..  .. +|++...  +-+++ +.++++..+.+.-.++...   .+.           
T Consensus       170 g~~VlV~G~-G~vG~~aiqlak~~--G~~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~~~~~~---~~~-----------  229 (343)
T PRK09880        170 GKRVFVSGV-GPIGCLIVAAVKTL--GAAEIVCADV--SPRSL-SLAREMGADKLVNPQNDDL---DHY-----------  229 (343)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEeC--CHHHH-HHHHHcCCcEEecCCcccH---HHH-----------
Confidence            368999996 99999999999876  45 4665543  33443 5678888877654322211   111           


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeee
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA  198 (353)
                            .+  ....+|+|+++..+-..+...+.+++.|-++.+.
T Consensus       230 ------~~--~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~  265 (343)
T PRK09880        230 ------KA--EKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQV  265 (343)
T ss_pred             ------hc--cCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEE
Confidence                  10  1124899999965556788888888888776554

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=92.96  E-value=0.74  Score=49.41  Aligned_cols=45  Identities=24%  Similarity=0.284  Sum_probs=34.4

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      ...|.|.|+|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+...
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~--Rn~ekl~~l~~  122 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKL--GFRVRAGV--RSAQRAESLVQ  122 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHH
Confidence            34578999999999999999888765  68888864  56666654443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=92.92  E-value=0.14  Score=48.84  Aligned_cols=33  Identities=24%  Similarity=0.398  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ||+|.|+|+||+||.....-+.+.. .++|+++.
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~-~~~V~~~~   33 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETT-DWEVYGMD   33 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCC-CCeEEEEe
Confidence            4689999999999999999887643 48999986

>PRK06924 short chain dehydrogenase; Provisional

Probab=92.90  E-value=0.62  Score=41.70  Aligned_cols=64  Identities=9%  Similarity=0.225  Sum_probs=40.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE-EEeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV-AVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V-~i~de~~~~~l~~  142 (353)
                      ||++.|.|+||.||.+..+-+.+.  .++|+.++ ++..+.+.+...+...+.. ...|-...++++.
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~--g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   65 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEK--GTHVISIS-RTENKELTKLAEQYNSNLTFHSLDLQDVHELET   65 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhc--CCEEEEEe-CCchHHHHHHHhccCCceEEEEecCCCHHHHHH
Confidence            578999999999999999988775  57887764 3333455554544444432 2334443444443

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=92.86  E-value=1.2  Score=40.10  Aligned_cols=63  Identities=14%  Similarity=0.094  Sum_probs=39.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+.+.+.++  .++|+.+.  +|-+.+.+.   +++...+...+ .|-...+.+..
T Consensus        11 ~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   77 (256)
T PRK06124         11 GQVALVTGSARGLGFEIARALAGA--GAHVLVNG--RNAATLEAAVAALRAAGGAAEALAFDIADEEAVAA   77 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHc--CCeEEEEe--CCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            568999999999999999988875  57777653  344444443   33444444333 34444444443

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=92.82  E-value=1  Score=41.73  Aligned_cols=94  Identities=17%  Similarity=0.149  Sum_probs=60.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|.|.|++|.+|..++.+.+..  ..+|++.+.  +-++ .+.++++..+.+.-.+....   .+              
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~--G~~vi~~~~--s~~~-~~~l~~~Ga~~vi~~~~~~~---~~--------------  202 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIK--GCKVIGCAG--SDDK-VAWLKELGFDAVFNYKTVSL---EE--------------  202 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHc--CCEEEEEeC--CHHH-HHHHHHcCCCEEEeCCCccH---HH--------------
Confidence            68999999999999999999986  567777653  2233 34556688777654332211   11              


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                        .+.++.. ..+|+|++.+.| ..+...+.+++.+=++.
T Consensus       203 --~v~~~~~-~gvd~vld~~g~-~~~~~~~~~l~~~G~iv  238 (329)
T cd08294         203 --ALKEAAP-DGIDCYFDNVGG-EFSSTVLSHMNDFGRVA  238 (329)
T ss_pred             --HHHHHCC-CCcEEEEECCCH-HHHHHHHHhhccCCEEE
Confidence              1222222 358999998766 56666677776554443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK07832 short chain dehydrogenase; Provisional

Probab=92.82  E-value=1.1  Score=41.06  Aligned_cols=44  Identities=23%  Similarity=0.162  Sum_probs=32.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      |++.|.|+||.||......+.+.  .++|+.+  ++|.+.+.+.+++.
T Consensus         1 k~vlItGas~giG~~la~~la~~--G~~vv~~--~r~~~~~~~~~~~~   44 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQ--GAELFLT--DRDADGLAQTVADA   44 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHH
Confidence            47999999999999999998875  5777665  35666655544443

>PRK08017 oxidoreductase; Provisional

Probab=92.81  E-value=1.2  Score=39.91  Aligned_cols=60  Identities=13%  Similarity=0.182  Sum_probs=39.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      |++.|.|+||.||.+..+.+.+.  .++|+++  .+|.+.+.+ +++.+.+.+ ..|-...+.+++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~--g~~v~~~--~r~~~~~~~-~~~~~~~~~-~~D~~~~~~~~~   62 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRR--GYRVLAA--CRKPDDVAR-MNSLGFTGI-LLDLDDPESVER   62 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHhHH-HHhCCCeEE-EeecCCHHHHHH
Confidence            67999999999999999999875  4677665  356666543 333443333 234444444444

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=92.79  E-value=0.51  Score=42.35  Aligned_cols=64  Identities=19%  Similarity=0.110  Sum_probs=44.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV  147 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~  147 (353)
                      ++|.|+|+||.||+.+++-+.+.  .++|++++  +|-+.+....  ..++. ...|-.....+...+.+.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~--r~~~~~~~~~--~~v~~-~~~d~~~~~~l~~a~~G~   64 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAV--RNPEAAAALA--GGVEV-VLGDLRDPKSLVAGAKGV   64 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhC--CCEEEEEE--eCHHHHHhhc--CCcEE-EEeccCCHhHHHHHhccc
Confidence            36999999999999999999887  78888876  6666665555  33332 234444455566555543

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=92.79  E-value=1.6  Score=39.09  Aligned_cols=95  Identities=11%  Similarity=0.071  Sum_probs=59.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++|.+|..++.+.+..  .++|++.+  ++-+.+. .++++..+.+...+...   +.              
T Consensus       137 g~~vlI~g~~g~~g~~~~~~a~~~--g~~v~~~~--~~~~~~~-~~~~~g~~~~~~~~~~~---~~--------------  194 (320)
T cd05286         137 GDTVLVHAAAGGVGLLLTQWAKAL--GATVIGTV--SSEEKAE-LARAAGADHVINYRDED---FV--------------  194 (320)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEc--CCHHHHH-HHHHCCCCEEEeCCchh---HH--------------
Confidence            367999999999999999999887  57777765  3444443 34667766655332211   11              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                        +.+.+......+|.+++...| ..+...+.+++.+-++
T Consensus       195 --~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~  231 (320)
T cd05286         195 --ERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPRGTL  231 (320)
T ss_pred             --HHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccCcEE
Confidence              122233333468999988766 4666666666554443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK07063 short chain dehydrogenase; Provisional

Probab=92.79  E-value=1.1  Score=40.61  Aligned_cols=45  Identities=18%  Similarity=0.130  Sum_probs=34.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+.+.+.+.  .++|+.+.  +|.+.+.+.++++
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~--r~~~~~~~~~~~~   51 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFARE--GAAVALAD--LDAALAERAAAAI   51 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            468999999999999999999876  57777653  4566666555554

>PRK06841 short chain dehydrogenase; Provisional

Probab=92.77  E-value=0.86  Score=40.86  Aligned_cols=33  Identities=27%  Similarity=0.326  Sum_probs=27.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .|++.|.|+||.||..+...+.+.  .++|+.++-
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r   47 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAK--GARVALLDR   47 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeC
Confidence            367999999999999999998875  578877653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.76  E-value=1.3  Score=39.73  Aligned_cols=44  Identities=18%  Similarity=0.118  Sum_probs=31.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      +|.+.|.|+||.||++..+-+.+.  .++|+.+. +++-+.+.+...
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~-r~~~~~~~~~~~   45 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAA--GFDLAIND-RPDDEELAATQQ   45 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe-cCchhHHHHHHH
Confidence            367999999999999999998876  57887765 333344433333

>PLN02240 UDP-glucose 4-epimerase

Probab=92.74  E-value=0.5  Score=44.70  Aligned_cols=32  Identities=28%  Similarity=0.442  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~   36 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLA--GYKVVVID   36 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe
Confidence            368999999999999999998875  47899885

>PRK05875 short chain dehydrogenase; Provisional

Probab=92.74  E-value=1.3  Score=40.36  Aligned_cols=40  Identities=20%  Similarity=0.176  Sum_probs=30.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q  120 (353)
                      |++.|.|+||.||....+-+.+.  .++|+++.  ++-+.+.+.
T Consensus         8 k~vlItGasg~IG~~la~~l~~~--G~~V~~~~--r~~~~~~~~   47 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVG--RNPDKLAAA   47 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHH
Confidence            68999999999999999988775  57887764  344444433

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=92.72  E-value=0.34  Score=46.05  Aligned_cols=33  Identities=18%  Similarity=0.325  Sum_probs=26.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||+|.|.|+||+||+....-+.+.  .++++.+..
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~--g~~~v~~~~   33 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINE--TSDAVVVVD   33 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHc--CCCEEEEEe
Confidence            578999999999999999988864  355555443

>PRK09242 tropinone reductase; Provisional

Probab=92.72  E-value=1.2  Score=40.20  Aligned_cols=45  Identities=16%  Similarity=0.156  Sum_probs=33.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+...++
T Consensus         9 ~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~--r~~~~~~~~~~~l   53 (257)
T PRK09242          9 GQTALITGASKGIGLAIAREFLGL--GADVLIVA--RDADALAQARDEL   53 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHH
Confidence            368999999999999999998875  56776664  4555555554443

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=92.70  E-value=2.7  Score=41.60  Aligned_cols=62  Identities=16%  Similarity=0.267  Sum_probs=38.8

Q ss_pred             EeecCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHH
Q 018600          221 ILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLE  296 (353)
Q Consensus       221 IlPVDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLE  296 (353)
                      .+|.|.-..| |+.+.+.   ..-|++|+    |+|.+++++..+.-    -+-|+=.  .|+-+|-..+-||--|
T Consensus       343 ~~~l~~~~~A-~~~~~~~---~~gKvvl~----~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~  404 (410)
T cd08238         343 IGGLNAAAET-TLNLPGI---PGGKKLIY----TQKPLPLTGIEELA----DKEPEEP--AAIVLENGGIWNKEAE  404 (410)
T ss_pred             EecHHHHHHH-HHHhhcc---CCceEEEE----CCCCCCCchhHhhH----hhcCCCh--HHHHHhcCCcCCHHHH
Confidence            4566654444 6666632   34578887    57777776665433    2334322  6888999999998544

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK06128 oxidoreductase; Provisional

Probab=92.70  E-value=1.2  Score=41.75  Aligned_cols=65  Identities=11%  Similarity=0.034  Sum_probs=41.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC---HHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN---ITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN---v~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      |++.|.|+||.||....+-+.+.  .++|+...-..+   .+.+.+.++.+..+..++ .|-...+.+++.
T Consensus        56 k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~  124 (300)
T PRK06128         56 RKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQL  124 (300)
T ss_pred             CEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Confidence            78999999999999999999875  567765433222   344555555555444433 344444444443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=92.67  E-value=1.2  Score=43.29  Aligned_cols=47  Identities=21%  Similarity=0.206  Sum_probs=39.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP  126 (353)
                      .|-+.|-|||..||..|-..+.+.  .++|+..  +++.++|.+.+.++..
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~--G~~vvl~--aRR~drL~~la~~~~~   52 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEA--GAKVVLA--ARREERLEALADEIGA   52 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHC--CCeEEEE--eccHHHHHHHHHhhcc
Confidence            367899999999999999999876  7788764  3678999999999984

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=92.63  E-value=1.6  Score=38.73  Aligned_cols=41  Identities=27%  Similarity=0.242  Sum_probs=30.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q  120 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~--r~~~~~~~~   43 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFD--LNREAAEKV   43 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEec--CCHHHHHHH
Confidence            468999999999999999988875  57777654  344544443

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05872 short chain dehydrogenase; Provisional

Probab=92.62  E-value=1.3  Score=41.58  Aligned_cols=45  Identities=16%  Similarity=0.179  Sum_probs=35.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      |++.|.|+||.||..+...+.+.  .++|+.+  ++|.+.+.+..+++.
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~l~~~~~~l~   54 (296)
T PRK05872         10 KVVVVTGAARGIGAELARRLHAR--GAKLALV--DLEEAELAALAAELG   54 (296)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhc
Confidence            68999999999999999999876  4676655  367777777777664

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=92.49  E-value=1.7  Score=38.71  Aligned_cols=64  Identities=17%  Similarity=0.130  Sum_probs=40.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEE-EEeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVV-AVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~---eFkPk~V-~i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||....+-+.+.  .++|+.+.  +|-+.+.+...   ...++.. ...|-...+.+++.
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   71 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKE--GAKVVIAD--LNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAG   71 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            368999999999999999988775  67887763  44454444333   3344432 33454444455443

>PRK07102 short chain dehydrogenase; Provisional

Probab=92.44  E-value=0.67  Score=41.49  Aligned_cols=43  Identities=21%  Similarity=0.210  Sum_probs=32.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      ||++.|.|+||.||..+..-+.+.  .++|+++.  +|.+.+.+.++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~--r~~~~~~~~~~   43 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAA--GARLYLAA--RDVERLERLAD   43 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEe--CCHHHHHHHHH
Confidence            578999999999999999988875  57777764  45555544433

>cd08293 PTGR2 Prostaglandin reductase

Probab=92.40  E-value=1.8  Score=40.74  Aligned_cols=95  Identities=13%  Similarity=0.080  Sum_probs=58.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|.|++|.+|..++++.+..  .. +|++.+.  +-+++....+++..+.+.-.++..   +.+             
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~--G~~~Vi~~~~--s~~~~~~~~~~lGa~~vi~~~~~~---~~~-------------  215 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLL--GCSRVVGICG--SDEKCQLLKSELGFDAAINYKTDN---VAE-------------  215 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHc--CCCEEEEEcC--CHHHHHHHHHhcCCcEEEECCCCC---HHH-------------
Confidence            68999999999999999998876  45 6777643  234433333347777765433221   111             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                         .+.++.. ..+|+|+++..|. .+...+.+++.+=++.
T Consensus       216 ---~i~~~~~-~gvd~vid~~g~~-~~~~~~~~l~~~G~iv  251 (345)
T cd08293         216 ---RLRELCP-EGVDVYFDNVGGE-ISDTVISQMNENSHII  251 (345)
T ss_pred             ---HHHHHCC-CCceEEEECCCcH-HHHHHHHHhccCCEEE
Confidence               1222222 3589999976664 3566666666554443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=92.37  E-value=1  Score=42.80  Aligned_cols=39  Identities=26%  Similarity=0.444  Sum_probs=31.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~  119 (353)
                      +||+|+||||=+|+-.++=..+.  ..+|+|++  +|-.++.+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAiv--Rn~~K~~~   39 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIV--RNASKLAA   39 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhC--CCeeEEEE--eChHhccc
Confidence            47999999999999998876654  68899998  66666654

>PRK06197 short chain dehydrogenase; Provisional

Probab=92.36  E-value=1  Score=42.25  Aligned_cols=40  Identities=20%  Similarity=0.159  Sum_probs=30.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~  119 (353)
                      .|++.|.|+||.||..+.+.+.+.  .++|+.+  .+|.+.+.+
T Consensus        16 ~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~--~r~~~~~~~   55 (306)
T PRK06197         16 GRVAVVTGANTGLGYETAAALAAK--GAHVVLA--VRNLDKGKA   55 (306)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEE--eCCHHHHHH
Confidence            378999999999999999988876  5677664  345555443

>PRK07074 short chain dehydrogenase; Provisional

Probab=92.32  E-value=1.7  Score=39.18  Aligned_cols=43  Identities=26%  Similarity=0.261  Sum_probs=32.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      |++.|.|+||.||..+.+-+.+.  .++|+++.  +|-+.+.+...+
T Consensus         3 k~ilItGat~~iG~~la~~L~~~--g~~v~~~~--r~~~~~~~~~~~   45 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAA--GDRVLALD--IDAAALAAFADA   45 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            57999999999999999988875  57787765  455555444443

>PRK08177 short chain dehydrogenase; Provisional

Probab=92.30  E-value=1.3  Score=39.37  Aligned_cols=33  Identities=18%  Similarity=0.370  Sum_probs=27.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||++.|.|+||.||+...+-+.+.  .++|++++-
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r   33 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVR   33 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeC
Confidence            578999999999999999888875  578887753

>PLN02572 UDP-sulfoquinovose synthase

Probab=92.27  E-value=0.63  Score=47.23  Aligned_cols=32  Identities=22%  Similarity=0.333  Sum_probs=27.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|+|.|.|+||+||....+-+.+.  .++|+++.
T Consensus        47 ~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d   78 (442)
T PLN02572         47 KKKVMVIGGDGYCGWATALHLSKR--GYEVAIVD   78 (442)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEe
Confidence            467999999999999999988875  57788863

>PRK09072 short chain dehydrogenase; Provisional

Probab=92.27  E-value=2.2  Score=38.80  Aligned_cols=44  Identities=23%  Similarity=0.347  Sum_probs=32.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      .|++.|.|+||.||.....-+.+.  .++|++++  +|.+.+.+..++
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~   48 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAA--GARLLLVG--RNAEKLEALAAR   48 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHH
Confidence            367999999999999999988875  57887765  455555444333

>PRK05650 short chain dehydrogenase; Provisional

Probab=92.26  E-value=1.5  Score=40.06  Aligned_cols=43  Identities=14%  Similarity=0.134  Sum_probs=31.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      |++.|.|+||.||....+.+.+.  .++|+.+.  ++.+.+.+...+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~--r~~~~~~~~~~~   43 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWARE--GWRLALAD--VNEEGGEETLKL   43 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            47999999999999999988876  56776543  455666555443

>PRK06914 short chain dehydrogenase; Provisional

Probab=92.25  E-value=1.3  Score=40.40  Aligned_cols=40  Identities=23%  Similarity=0.184  Sum_probs=30.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q  120 (353)
                      |.+.|.|+||.||.+..+-+.+.  .++|+++.  ++.+.+.+.
T Consensus         4 k~~lItGasg~iG~~la~~l~~~--G~~V~~~~--r~~~~~~~~   43 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKK--GYLVIATM--RNPEKQENL   43 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhC--CCEEEEEe--CCHHHHHHH
Confidence            57999999999999999988765  68888764  444444433

>PRK12937 short chain dehydrogenase; Provisional

Probab=92.24  E-value=2.1  Score=37.98  Aligned_cols=65  Identities=17%  Similarity=0.188  Sum_probs=39.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||....+.+.+.  .++|+.+ ..++-+.   +.+.++++..+...+ .|-...+.+++.
T Consensus         5 ~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   73 (245)
T PRK12937          5 NKVAIVTGASRGIGAAIARRLAAD--GFAVAVN-YAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRL   73 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEe-cCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            468999999999999999998876  5667654 3444333   344444444443332 344444444443

>TIGR01921 DAP-DH diaminopimelate dehydrogenase

Probab=92.24  E-value=0.8  Score=45.83  Aligned_cols=39  Identities=13%  Similarity=0.304  Sum_probs=32.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL  116 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l  116 (353)
                      +.||+|+|. |.||+..+..+.++|+ |+++|+...+.-+.
T Consensus         3 kIRVgIVG~-GnIGr~~a~al~~~pd-~ELVgV~dr~~~~~   41 (324)
T TIGR01921         3 KIRAAIVGY-GNLGRSVEKAIQQQPD-MELVGVFSRRGAET   41 (324)
T ss_pred             CcEEEEEee-cHHHHHHHHHHHhCCC-cEEEEEEcCCcHHH
Confidence            358999997 9999999999998876 99999877764343

This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.

>PRK07201 short chain dehydrogenase; Provisional

Probab=92.22  E-value=0.43  Score=49.40  Aligned_cols=47  Identities=19%  Similarity=0.250  Sum_probs=36.7

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      +|.|.|+||+||+..+.-+.+++..++|.+++-......+.++...+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~   48 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYW   48 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhc
Confidence            69999999999999999988766679999998655555555544443

>PRK07478 short chain dehydrogenase; Provisional

Probab=92.13  E-value=1.6  Score=39.34  Aligned_cols=63  Identities=19%  Similarity=0.151  Sum_probs=39.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+.   +++...+...+ .|-...+.+++
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFARE--GAKVVVGA--RRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKA   72 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            368999999999999999988875  56777664  445554444   33334444333 34444444443

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=92.13  E-value=0.58  Score=45.62  Aligned_cols=50  Identities=16%  Similarity=0.275  Sum_probs=40.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV  128 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~  128 (353)
                      .++++.|-|||+=||...-+.+.++  .|.|+-++  ++.++|.+++++..=++
T Consensus         5 ~~~~~lITGASsGIG~~~A~~lA~~--g~~liLva--R~~~kL~~la~~l~~~~   54 (265)
T COG0300           5 KGKTALITGASSGIGAELAKQLARR--GYNLILVA--RREDKLEALAKELEDKT   54 (265)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CcHHHHHHHHHHHHHhh
Confidence            4578999999999999999999987  56666554  78899988888776555

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=92.11  E-value=0.27  Score=45.22  Aligned_cols=49  Identities=18%  Similarity=0.224  Sum_probs=36.7

Q ss_pred             EEEecCChHhHHHHHHHHhCCCceEEEEEeecC-----CHHHHHHHHHhhCCCEEE
Q 018600           80 SVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-----NITLLADQVKRFKPQVVA  130 (353)
Q Consensus        80 ~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-----Nv~lL~~Q~~eFkPk~V~  130 (353)
                      .|.|+||+||++..+-+.+.  .++|+.+..+.     +.+.|.+..+.++|++|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~~~~Dl~~~~~l~~~~~~~~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTHKELDLTRQADVEAFFAKEKPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhC--CCcEEEeeccccCCCCCHHHHHHHHhccCCCEEE
Confidence            38999999999999999775  46666554433     455677777788898876

>PRK12746 short chain dehydrogenase; Provisional

Probab=92.11  E-value=1.2  Score=40.00  Aligned_cols=45  Identities=20%  Similarity=0.194  Sum_probs=34.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      |++.|.|+||.||....+-+.+.  ..+|+.+. .+|.+.+.+...++
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~--G~~v~i~~-~r~~~~~~~~~~~~   51 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLAND--GALVAIHY-GRNKQAADETIREI   51 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHHHHHH
Confidence            68999999999999999988775  56665543 45666666666554

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=92.10  E-value=1.8  Score=40.21  Aligned_cols=95  Identities=8%  Similarity=0.056  Sum_probs=60.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++|++|..++.+.+..  ..+|++++.  +-+.. +.++++.++.+.-.++..   +.              
T Consensus       140 ~~~vlI~ga~g~ig~~~~~~a~~~--g~~v~~~~~--~~~~~-~~~~~~g~~~v~~~~~~~---~~--------------  197 (329)
T cd08250         140 GETVLVTAAAGGTGQFAVQLAKLA--GCHVIGTCS--SDEKA-EFLKSLGCDRPINYKTED---LG--------------  197 (329)
T ss_pred             CCEEEEEeCccHHHHHHHHHHHHc--CCeEEEEeC--cHHHH-HHHHHcCCceEEeCCCcc---HH--------------
Confidence            357999999999999999999987  466777653  33333 344667776554332211   11              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                        +.+.+... ..+|.|++.+.| ..+...+..+..+-++.
T Consensus       198 --~~~~~~~~-~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v  234 (329)
T cd08250         198 --EVLKKEYP-KGVDVVYESVGG-EMFDTCVDNLALKGRLI  234 (329)
T ss_pred             --HHHHHhcC-CCCeEEEECCcH-HHHHHHHHHhccCCeEE
Confidence              12222222 358999998655 67777788886665543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02427 UDP-apiose/xylose synthase

Probab=92.08  E-value=0.24  Score=48.13  Aligned_cols=35  Identities=26%  Similarity=0.432  Sum_probs=29.0

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ..+++|.|.|+||+||.+.++-+.+.. .++|+++.
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~-g~~V~~l~   46 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTET-PHKVLALD   46 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcC-CCEEEEEe
Confidence            445789999999999999999887652 47899986

>PRK06483 dihydromonapterin reductase; Provisional

Probab=92.08  E-value=1.6  Score=38.81  Aligned_cols=62  Identities=18%  Similarity=0.102  Sum_probs=39.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      +|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+++++.+.. +.-.|-...+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~   63 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQ--GQPVIVSY--RTHYPAIDGLRQAGAQ-CIQADFSTNAGIMA   63 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHC--CCeEEEEe--CCchhHHHHHHHcCCE-EEEcCCCCHHHHHH
Confidence            468999999999999999988865  67888764  3334445555544432 23334444444443

>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]

Probab=92.08  E-value=1.8  Score=43.90  Aligned_cols=107  Identities=21%  Similarity=0.265  Sum_probs=83.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .||.|+.-++++=+-.-+++...|+ .+|++.+  .|-....+++++++|+.+.+..|                .-+.-|
T Consensus         2 irVlvVddsal~R~~i~~~l~~~~~-i~vv~~a--~ng~~a~~~~~~~~PDVi~ld~e----------------mp~mdg   62 (350)
T COG2201           2 IRVLVVDDSALMRKVISDILNSDPD-IEVVGTA--RNGREAIDKVKKLKPDVITLDVE----------------MPVMDG   62 (350)
T ss_pred             cEEEEEcCcHHHHHHHHHHHhcCCC-eEEEEec--CCHHHHHHHHHhcCCCEEEEecc----------------cccccH
Confidence            4799999999999999999999886 8888877  56788899999999999998643                123446


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL  203 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL  203 (353)
                      -+-+.++.+....-+||..-..--|-.-|+.|++.|.-=.+ .|++.
T Consensus        63 l~~l~~im~~~p~pVimvsslt~~g~~~t~~al~~gAvD~i-~kp~~  108 (350)
T COG2201          63 LEALRKIMRLRPLPVIMVSSLTEEGAEATLEALELGAVDFI-AKPSG  108 (350)
T ss_pred             HHHHHHHhcCCCCcEEEEeccccccHHHHHHHHhcCcceee-cCCCc
Confidence            66677777766666777777888889999999999944444 44443

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.05  E-value=1.5  Score=39.05  Aligned_cols=63  Identities=22%  Similarity=0.150  Sum_probs=37.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-eCccchHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIK  141 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~  141 (353)
                      .|++.|.|+||.||.+..+-+.+.  .++|+.+ ..++-+.+.+   .+++...+...+ .|-...+++.
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   72 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVN-AKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCE   72 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHC--CCEEEEE-eCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHH
Confidence            478999999999999999988764  5676653 3334344433   344444443322 3433333443

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=92.00  E-value=1.6  Score=39.85  Aligned_cols=64  Identities=16%  Similarity=0.109  Sum_probs=41.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~-i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||.++..-+.++  .++|+.+  .++-+.+.++..++   ..+... ..|-...+.++..
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   77 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKA--GATIVFN--DINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAM   77 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEE--eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            368999999999999999988876  5777765  34455555554444   333332 3454445555543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=91.98  E-value=0.24  Score=48.60  Aligned_cols=35  Identities=14%  Similarity=0.152  Sum_probs=29.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      .|+|.|+|+||+||..+...+.+.  .++|++++-..
T Consensus        21 ~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~   55 (370)
T PLN02695         21 KLRICITGAGGFIASHIARRLKAE--GHYIIASDWKK   55 (370)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEecc
Confidence            368999999999999999999875  68999987443

>PRK06198 short chain dehydrogenase; Provisional

Probab=91.91  E-value=1.3  Score=39.87  Aligned_cols=31  Identities=26%  Similarity=0.221  Sum_probs=24.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVAL  108 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaL  108 (353)
                      .|++.|.|+||.||.+..+.+.+.  ..+ |+.+
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~   37 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAER--GAAGLVIC   37 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEE
Confidence            367999999999999999998875  455 5543

>PRK07904 short chain dehydrogenase; Provisional

Probab=91.89  E-value=2.5  Score=38.83  Aligned_cols=35  Identities=31%  Similarity=0.415  Sum_probs=27.6

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ..+|++.|.|+||-||....+-+.+.. .++|+.++
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~g-g~~V~~~~   40 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNA-PARVVLAA   40 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcC-CCeEEEEe
Confidence            456789999999999999998877642 37787653

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=91.87  E-value=1.8  Score=36.46  Aligned_cols=47  Identities=19%  Similarity=0.274  Sum_probs=34.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP  126 (353)
                      .++|.|+|+ |.+|.....-+.+.. ..+|.. . ++|.+.+.+.++++..
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v-~-~r~~~~~~~~~~~~~~   65 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELG-AAKIVI-V-NRTLEKAKALAERFGE   65 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC-CCEEEE-E-cCCHHHHHHHHHHHhh
Confidence            468999997 999999999888763 233433 2 5677777777777654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PLN02253 xanthoxin dehydrogenase

Probab=91.86  E-value=1.9  Score=39.57  Aligned_cols=45  Identities=18%  Similarity=0.205  Sum_probs=32.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|++|.||..+..-+.+.  .++|+.+.  ++-+.+.+.+.+.
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~--~~~~~~~~~~~~~   62 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKH--GAKVCIVD--LQDDLGQNVCDSL   62 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHh
Confidence            468999999999999999988875  57777653  3444444444444

>PRK07109 short chain dehydrogenase; Provisional

Probab=91.85  E-value=1.6  Score=42.31  Aligned_cols=63  Identities=17%  Similarity=0.256  Sum_probs=41.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~---~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.++  +|-+.+.   +++++...+...+ .|-...+.+++
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~--R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~   74 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARR--GAKVVLLA--RGEEGLEALAAEIRAAGGEALAVVADVADAEAVQA   74 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHH
Confidence            468999999999999999988775  57777654  4555444   4444545554433 35444444444

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=91.85  E-value=1.9  Score=38.91  Aligned_cols=45  Identities=20%  Similarity=0.121  Sum_probs=33.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||.++..-+.+.  .++|+..  .+|.+.+.+...+.
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~--G~~vvl~--~r~~~~~~~~~~~l   53 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEY--GAEIIIN--DITAERAELAVAKL   53 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHc--CCEEEEE--cCCHHHHHHHHHHH
Confidence            468999999999999999999875  5777754  35556655554443

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=91.84  E-value=1.9  Score=39.22  Aligned_cols=44  Identities=23%  Similarity=0.205  Sum_probs=32.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      +++.|.|++|.||..+..-+.+.  .++|+.+  .+|-+.+.+...+.
T Consensus         1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~l   44 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKK--GARVVIS--SRNEENLEKALKEL   44 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEE--eCCHHHHHHHHHHH
Confidence            36999999999999999988875  5776654  35566665555443

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.81  E-value=1.9  Score=38.32  Aligned_cols=45  Identities=20%  Similarity=0.139  Sum_probs=33.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||....+-+.+.  .++|+.+.  +|-+.+.+...+.
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~--r~~~~~~~~~~~~   51 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKE--GVNVGLLA--RTEENLKAVAEEV   51 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            368999999999999999988765  56777754  4555555544443

>PRK05854 short chain dehydrogenase; Provisional

Probab=91.69  E-value=1.5  Score=41.87  Aligned_cols=43  Identities=19%  Similarity=0.084  Sum_probs=32.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      .|.+.|.|+||.||..+...+.+.  .++|+.+  .+|.+.+.+.++
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~--G~~Vil~--~R~~~~~~~~~~   56 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAA--GAEVILP--VRNRAKGEAAVA   56 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHH
Confidence            478999999999999999999875  5777664  356555544433

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.67  E-value=2.2  Score=38.60  Aligned_cols=62  Identities=16%  Similarity=0.132  Sum_probs=38.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~  143 (353)
                      |++.|.|+||.||.++.+.+.+.  .++|+.+ .+++-+.+.+ .++.+.. ....|-...+.+++.
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~--G~~v~~~-~~~~~~~~~~-l~~~~~~-~~~~Dl~~~~~~~~~   69 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLRE--GAKVAVL-YNSAENEAKE-LREKGVF-TIKCDVGNRDQVKKS   69 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEE-eCCcHHHHHH-HHhCCCe-EEEecCCCHHHHHHH
Confidence            78999999999999999998876  5677654 3444444433 3332322 223344444444443

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=91.65  E-value=0.24  Score=48.75  Aligned_cols=33  Identities=30%  Similarity=0.619  Sum_probs=29.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      ||+|+|+||.+|+..++.+.+||+ |+|+++...
T Consensus         2 kVaIvGatG~~G~~L~~~l~~~~~-~~l~~v~~~   34 (341)
T TIGR00978         2 RVAVLGATGLVGQKFVKLLAKHPY-FELAKVVAS   34 (341)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-ceEEEEEEC
Confidence            799999999999999999999876 899998654

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=91.64  E-value=2.5  Score=37.70  Aligned_cols=83  Identities=23%  Similarity=0.215  Sum_probs=49.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEE-EeCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVA-VRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~---~Q~~eFkPk~V~-i~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|.+.|.|+||.||..+.+-+.+.  ..+|+.+.. ++.+...   +++++...+.+. ..|-...+.+.+.+.      
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   73 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCG-PNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFD------   73 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcC-CChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH------
Confidence            367999999999999999999887  567777543 3333333   333333444433 245444444544331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.+.  ..++|+||+..
T Consensus        74 -------~~~~~--~~~id~li~~a   89 (246)
T PRK12938         74 -------KVKAE--VGEIDVLVNNA   89 (246)
T ss_pred             -------HHHHH--hCCCCEEEECC
Confidence                   12221  24688888873

>PRK05993 short chain dehydrogenase; Provisional

Probab=91.64  E-value=1.9  Score=39.83  Aligned_cols=42  Identities=19%  Similarity=0.245  Sum_probs=32.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|++++  +|.+.+.+..
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~--r~~~~~~~l~   45 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSD--GWRVFATC--RKEEDVAALE   45 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHH
Confidence            368999999999999999888764  67887754  5666665443

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=91.54  E-value=3.2  Score=39.76  Aligned_cols=105  Identities=15%  Similarity=0.258  Sum_probs=62.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|+|+ |+||..++.+.+..  ..+|+++.  ++-+++ +.++++..+.+.-..+...+.+.+.+...       .
T Consensus       167 g~~VlV~G~-G~vG~~a~~~a~~~--G~~vi~~~--~~~~~~-~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~-------t  233 (349)
T TIGR03201       167 GDLVIVIGA-GGVGGYMVQTAKAM--GAAVVAID--IDPEKL-EMMKGFGADLTLNPKDKSAREVKKLIKAF-------A  233 (349)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCeEEEEc--CCHHHH-HHHHHhCCceEecCccccHHHHHHHHHhh-------c
Confidence            468999999 99999999999987  35777653  344554 35678887765433222222232222110       0


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA  198 (353)
                      +..|+     ....|.|+.+..+..++.-.+.+++.|=++.+.
T Consensus       234 ~~~g~-----d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~  271 (349)
T TIGR03201       234 KARGL-----RSTGWKIFECSGSKPGQESALSLLSHGGTLVVV  271 (349)
T ss_pred             ccCCC-----CCCcCEEEECCCChHHHHHHHHHHhcCCeEEEE
Confidence            00111     011458888876666676677788777666543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=91.52  E-value=2  Score=40.48  Aligned_cols=95  Identities=14%  Similarity=0.170  Sum_probs=61.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ..+|.|+|+ |.||..++.+.+...  .+ |+++.  ++-+++ +.++++..+.+.-..+...+                
T Consensus       164 g~~vlV~G~-G~vG~~~~~~ak~~G--~~~vi~~~--~~~~~~-~~~~~~ga~~~i~~~~~~~~----------------  221 (339)
T cd08239         164 RDTVLVVGA-GPVGLGALMLARALG--AEDVIGVD--PSPERL-ELAKALGADFVINSGQDDVQ----------------  221 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEEC--CCHHHH-HHHHHhCCCEEEcCCcchHH----------------
Confidence            358999986 999999999998863  45 77654  344444 45678887665432211111                


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                          .+.++.....+|+|+++..+-..+...+..++.+-++.
T Consensus       222 ----~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v  259 (339)
T cd08239         222 ----EIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLV  259 (339)
T ss_pred             ----HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence                22233333368999999777666677777777765554

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02415 23BDH acetoin reductases

Probab=91.49  E-value=2.1  Score=38.30  Aligned_cols=31  Identities=26%  Similarity=0.313  Sum_probs=25.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |++.|.|+||.||....+-+.+.  .++|+.+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~   31 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVAD   31 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe
Confidence            57999999999999999988875  56777664

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07576 short chain dehydrogenase; Provisional

Probab=91.48  E-value=2.2  Score=39.16  Aligned_cols=82  Identities=17%  Similarity=0.205  Sum_probs=49.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||....+-+.+.  ..+|+++.  ++.+.+.+..+++   .++...+ .|-...+.++..+.      
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~------   78 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARA--GANVAVAS--RSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFA------   78 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHH------
Confidence            368999999999999999988875  56777664  4555555544333   3333322 34444444444321      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.  .....+|.|++..
T Consensus        79 -------~~~--~~~~~iD~vi~~a   94 (264)
T PRK07576         79 -------QIA--DEFGPIDVLVSGA   94 (264)
T ss_pred             -------HHH--HHcCCCCEEEECC
Confidence                   111  1224688888765

>PRK06139 short chain dehydrogenase; Provisional

Probab=91.46  E-value=1.6  Score=42.44  Aligned_cols=63  Identities=21%  Similarity=0.301  Sum_probs=41.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~---~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|.+.|.|+||.||..+...+.+.  .++|+.++  +|-+.|.+..   +++..+..++ .|-...+.++.
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~--R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~   73 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARR--GARLVLAA--RDEEALQAVAEECRALGAEVLVVPTDVTDADQVKA   73 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHH
Confidence            368999999999999999999876  56777543  5666665544   4445554332 34444444443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=91.33  E-value=0.71  Score=43.86  Aligned_cols=32  Identities=19%  Similarity=0.285  Sum_probs=27.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus         7 ~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r   38 (340)
T PLN02653          7 KVALITGITGQDGSYLTEFLLSK--GYEVHGIIR   38 (340)
T ss_pred             CEEEEECCCCccHHHHHHHHHHC--CCEEEEEec
Confidence            56999999999999999998875  578888753

>PRK07775 short chain dehydrogenase; Provisional

Probab=91.31  E-value=2.3  Score=39.22  Aligned_cols=43  Identities=26%  Similarity=0.294  Sum_probs=31.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      +|.+.|.|+||.||..+.+-+.+.  .++|+.++  +|.+.+.+...
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~--r~~~~~~~~~~   52 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAA--GFPVALGA--RRVEKCEELVD   52 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHH
Confidence            368999999999999999988875  57777654  35555544433

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=91.30  E-value=2.3  Score=38.27  Aligned_cols=31  Identities=23%  Similarity=0.324  Sum_probs=26.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~   33 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEE--GYRVAVAD   33 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEE
Confidence            67999999999999999999876  57776653

>PRK08862 short chain dehydrogenase; Provisional

Probab=91.28  E-value=2.2  Score=38.96  Aligned_cols=81  Identities=10%  Similarity=0.111  Sum_probs=50.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~---~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~  152 (353)
                      |.+.|.|+|+-||.++...+.+.  .++|+..  ++|.+.+.   +++++...+.+.+ .|-...+.++..+.       
T Consensus         6 k~~lVtGas~GIG~aia~~la~~--G~~V~~~--~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARL--GATLILC--DQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFD-------   74 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHH-------
Confidence            68999999999999999999886  5777664  44556554   4455555554333 34444444444321       


Q ss_pred             EEecHHHHHHHhcCC-CCcEEEEec
Q 018600          153 ILAGEQGVIEAARHP-DAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~-~~D~Vv~AI  176 (353)
                            .+.+  +.. .+|++++..
T Consensus        75 ------~~~~--~~g~~iD~li~na   91 (227)
T PRK08862         75 ------AIEQ--QFNRAPDVLVNNW   91 (227)
T ss_pred             ------HHHH--HhCCCCCEEEECC
Confidence                  1111  223 689998885

>TIGR01746 Thioester-redct thioester reductase domain

Probab=91.25  E-value=0.58  Score=43.47  Aligned_cols=36  Identities=19%  Similarity=0.402  Sum_probs=29.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      +|.|.|+||+||...++-+.+.....+|+++.-..+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~   36 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS   36 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence            488999999999999998887655578999875444

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=91.21  E-value=1.9  Score=39.25  Aligned_cols=93  Identities=19%  Similarity=0.214  Sum_probs=60.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++|++|..++.+.+..  .++|++++...  +. .++++++..+.+...+++    +.+             
T Consensus       143 g~~vlV~ga~g~~g~~~~~~a~~~--g~~v~~~~~~~--~~-~~~~~~~g~~~~~~~~~~----~~~-------------  200 (320)
T cd08243         143 GDTLLIRGGTSSVGLAALKLAKAL--GATVTATTRSP--ER-AALLKELGADEVVIDDGA----IAE-------------  200 (320)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHc--CCEEEEEeCCH--HH-HHHHHhcCCcEEEecCcc----HHH-------------
Confidence            368999999999999999999987  47777765443  33 345567777665432111    111             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                         .+.++  ...+|.+++.+.| ..+...+..+..+-++.
T Consensus       201 ---~i~~~--~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v  235 (320)
T cd08243         201 ---QLRAA--PGGFDKVLELVGT-ATLKDSLRHLRPGGIVC  235 (320)
T ss_pred             ---HHHHh--CCCceEEEECCCh-HHHHHHHHHhccCCEEE
Confidence               12223  2358999987665 56777777776654443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=91.21  E-value=1.2  Score=42.61  Aligned_cols=33  Identities=24%  Similarity=0.425  Sum_probs=27.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |+|.|.|+||+||.+..+-+.+..+.++|+++.
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~   37 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYS   37 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEc
Confidence            679999999999999999887754346787764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=91.14  E-value=2.3  Score=38.45  Aligned_cols=42  Identities=26%  Similarity=0.293  Sum_probs=31.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      |++.|.|+||.||.+..+-+.++  .++|+.+.  +|.+.+.+..+
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~   54 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEA--GARVVLSA--RKAEELEEAAA   54 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHH
Confidence            68999999999999999998875  45775543  45555544443

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=91.11  E-value=2.4  Score=40.20  Aligned_cols=96  Identities=14%  Similarity=0.093  Sum_probs=58.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh-hCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR-FKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e-FkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ..+|.|.|++|.+|..++++.+..  .++|++.+..  -++ .+.+++ +..+.+.-.+.+  ..+.+            
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~--G~~Vi~~~~~--~~~-~~~~~~~lGa~~vi~~~~~--~~~~~------------  212 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLK--GCYVVGSAGS--DEK-VDLLKNKLGFDDAFNYKEE--PDLDA------------  212 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHc--CCEEEEEeCC--HHH-HHHHHHhcCCceeEEcCCc--ccHHH------------
Confidence            368999999999999999999986  5677775532  233 334444 777666532211  01111            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                          .+.+... ..+|+|++.+.| ..+...+.+++.+-++.
T Consensus       213 ----~i~~~~~-~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv  248 (338)
T cd08295         213 ----ALKRYFP-NGIDIYFDNVGG-KMLDAVLLNMNLHGRIA  248 (338)
T ss_pred             ----HHHHhCC-CCcEEEEECCCH-HHHHHHHHHhccCcEEE
Confidence                1122222 358999998655 56666777776655443

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK06179 short chain dehydrogenase; Provisional

Probab=91.08  E-value=1.7  Score=39.45  Aligned_cols=38  Identities=26%  Similarity=0.331  Sum_probs=29.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL  117 (353)
                      .|++.|.|+||.||.....-+.+.  .++|++++  +|.+.+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~--r~~~~~   41 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARA--GYRVFGTS--RNPARA   41 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEe--CChhhc
Confidence            467999999999999999888875  68887765  444443

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=91.05  E-value=0.32  Score=48.95  Aligned_cols=37  Identities=35%  Similarity=0.624  Sum_probs=28.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh-CCCceE-EEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAE-HEDKFR-VVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~-~pd~F~-VvaLaagsN  113 (353)
                      +++|+|+|+||.+|+..++.+.+ |+. |+ +..++-.++
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~-~~~~~~~AS~rS   39 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFP-FEELVLLASARS   39 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCC-cceEEEEecccc
Confidence            46899999999999999999998 765 55 444443333

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=91.03  E-value=1.5  Score=41.23  Aligned_cols=30  Identities=30%  Similarity=0.408  Sum_probs=25.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~   31 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQN--GHDVVILD   31 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHC--CCeEEEEe
Confidence            6999999999999999988764  57888874

>PRK08339 short chain dehydrogenase; Provisional

Probab=90.97  E-value=2.7  Score=38.69  Aligned_cols=45  Identities=20%  Similarity=0.160  Sum_probs=33.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~   52 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARA--GADVILL--SRNEENLKKAREKI   52 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHH
Confidence            467999999999999999988875  5777664  35666665544443

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=90.95  E-value=2.4  Score=41.04  Aligned_cols=96  Identities=13%  Similarity=0.096  Sum_probs=59.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|.|.|++|.||..++.+.+..  ..+|++.+  ++-+++....+++..+.+.-.+++  ..+.+              
T Consensus       160 ~~VlV~GaaG~vG~~aiqlAk~~--G~~Vi~~~--~~~~k~~~~~~~lGa~~vi~~~~~--~~~~~--------------  219 (348)
T PLN03154        160 DSVFVSAASGAVGQLVGQLAKLH--GCYVVGSA--GSSQKVDLLKNKLGFDEAFNYKEE--PDLDA--------------  219 (348)
T ss_pred             CEEEEecCccHHHHHHHHHHHHc--CCEEEEEc--CCHHHHHHHHHhcCCCEEEECCCc--ccHHH--------------
Confidence            58999999999999999999986  46777654  333443332336777776543211  01111              


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                        .+.++.. ..+|+|++++.| ..+...+.+++.|-++.
T Consensus       220 --~i~~~~~-~gvD~v~d~vG~-~~~~~~~~~l~~~G~iv  255 (348)
T PLN03154        220 --ALKRYFP-EGIDIYFDNVGG-DMLDAALLNMKIHGRIA  255 (348)
T ss_pred             --HHHHHCC-CCcEEEEECCCH-HHHHHHHHHhccCCEEE
Confidence              1122222 258999987654 45666667776665554

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.93  E-value=2.6  Score=37.25  Aligned_cols=43  Identities=16%  Similarity=0.192  Sum_probs=31.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      .|+|.|.|+||.||....+.+.+.  .++|++++  ++-+.+.+..+
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~   47 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKE--GAQVCINS--RNENKLKRMKK   47 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHH
Confidence            368999999999999999998875  67888764  34455544433

>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group

Probab=90.83  E-value=0.95  Score=40.54  Aligned_cols=55  Identities=13%  Similarity=0.130  Sum_probs=42.1

Q ss_pred             eeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           77 KPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        77 k~I~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      +||+++|| +||.+...|+-+.+....++++++..++.-..-..-+.+..+....+
T Consensus         1 mrI~~~~Sg~~~~~~~~l~~l~~~~~~~~iv~Vit~~~~~~~~~~~~~~~~~~~~~   56 (181)
T PF00551_consen    1 MRIVFFGSGSGSFLKALLEALKARGHNVEIVLVITNPDKPRGRSRAIKNGIPAQVA   56 (181)
T ss_dssp             EEEEEEESSSSHHHHHHHHHHHTTSSEEEEEEEEESSTTTHHHHHHHHTTHHEEEH
T ss_pred             CEEEEEEcCCCHHHHHHHHHHHhCCCCceEEEEeccccccccccccccCCCCEEec
Confidence            58999975 56889999999998878899999998876666556666666655443

Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=90.79  E-value=2.7  Score=35.07  Aligned_cols=83  Identities=16%  Similarity=0.186  Sum_probs=49.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHH---HhhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQV---KRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~---~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      |.+.|.|+||=||.+..+-..+. ....|+. ..++ +.+.+.+.+   +....+...+ .|-...+.+++.+.      
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~-g~~~v~~-~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~------   72 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARR-GARVVIL-TSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIE------   72 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHT-TTEEEEE-EESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHH------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc-CceEEEE-eeeccccccccccccccccccccccccccccccccccccccc------
Confidence            67999999999999999999887 3344444 4433 345444444   4334544444 34444455554432      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.  .+....|++++.-
T Consensus        73 -------~~~--~~~~~ld~li~~a   88 (167)
T PF00106_consen   73 -------EVI--KRFGPLDILINNA   88 (167)
T ss_dssp             -------HHH--HHHSSESEEEEEC
T ss_pred             -------ccc--ccccccccccccc
Confidence                   111  2345689999873

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=90.77  E-value=4.2  Score=38.09  Aligned_cols=99  Identities=17%  Similarity=0.192  Sum_probs=62.4

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      +...++|.|+|+ |++|..++.+.+.... .+|++.+..  -+.+. .+++|..+.+.-.++..                
T Consensus       165 ~~~~~~vlI~g~-~~vg~~~~~~a~~~g~-~~v~~~~~~--~~~~~-~~~~~g~~~~~~~~~~~----------------  223 (340)
T cd05284         165 LDPGSTVVVIGV-GGLGHIAVQILRALTP-ATVIAVDRS--EEALK-LAERLGADHVLNASDDV----------------  223 (340)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHhCC-CcEEEEeCC--HHHHH-HHHHhCCcEEEcCCccH----------------
Confidence            334578999995 5599999999998632 677776533  33333 34677766654332221                


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                          .+.+.++.....+|+|++.+.|-..+...+.++..+-++.
T Consensus       224 ----~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i  263 (340)
T cd05284         224 ----VEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYV  263 (340)
T ss_pred             ----HHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEE
Confidence                1223334443468999998776567777788887665544

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=90.77  E-value=0.29  Score=49.71  Aligned_cols=33  Identities=24%  Similarity=0.445  Sum_probs=26.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE---EEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR---VVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~---VvaLa  109 (353)
                      |.+|+|+||||.+|...++.+.+||+ |.   ++.++
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~-f~~~~l~~~s   36 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEEND-FDLIEPVFFS   36 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCC-CCcCcEEEec
Confidence            46899999999999999996677775 77   66644

>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent

Probab=90.70  E-value=5.2  Score=36.80  Aligned_cols=117  Identities=21%  Similarity=0.154  Sum_probs=71.9

Q ss_pred             eeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc------hHHHHHHhhcCCC
Q 018600           77 KPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL------LDEIKEALANVEE  149 (353)
Q Consensus        77 k~I~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~------~~~l~~~l~~~~~  149 (353)
                      +||+||-| +||-....++-+.+.....+|+++..++.-....+.+++..-.+..+..++.      -.++.+.+...+.
T Consensus         1 ~riail~sg~gs~~~~ll~~~~~~~l~~~I~~vi~~~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~~~~~l~~~~~   80 (190)
T TIGR00639         1 KRIVVLISGNGSNLQAIIDACKEGKIPASVVLVISNKPDAYGLERAAQAGIPTFVLSLKDFPSREAFDQAIIEELRAHEV   80 (190)
T ss_pred             CeEEEEEcCCChhHHHHHHHHHcCCCCceEEEEEECCccchHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHhcCC
Confidence            47898887 6777777777777765568899887765445557888888877766542211      1234444444444


Q ss_pred             CcEEEecHHHHH--HHhcCCCCcEEEEe----ccCccCcHHHHHHHHcCCc
Q 018600          150 KPEILAGEQGVI--EAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       150 ~~~v~~G~~gl~--~~a~~~~~D~Vv~A----IvG~aGL~pT~~Ai~~gK~  194 (353)
                      +.-|+.|---+.  ++.+.+.. -++|-    +--+-|..|...|+.+|.+
T Consensus        81 D~iv~~~~~~il~~~~l~~~~~-~~iNiHpslLP~yrG~~p~~~ai~~g~~  130 (190)
T TIGR00639        81 DLVVLAGFMRILGPTFLSRFAG-RILNIHPSLLPAFPGLHAVEQALEAGVK  130 (190)
T ss_pred             CEEEEeCcchhCCHHHHhhccC-CEEEEeCCcccCCCCccHHHHHHHcCCC
Confidence            555666653221  12222211 24553    3447889999999999853

In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=90.69  E-value=0.42  Score=39.44  Aligned_cols=33  Identities=48%  Similarity=0.846  Sum_probs=29.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      ||+|+|+||-+|...++.+.++|+ |+++++...
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~-~~l~av~~~   33 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPD-FEVVALAAS   33 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCC-ceEEEEEec
Confidence            589999999999999999999875 999999553

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PLN02503 fatty acyl-CoA reductase 2

Probab=90.56  E-value=1.6  Score=46.96  Aligned_cols=43  Identities=14%  Similarity=0.215  Sum_probs=33.2

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHH-HhCCCceEEEEEeecCC
Q 018600           71 KTWDGPKPISVLGSTGSIGTQTLDIV-AEHEDKFRVVALAAGSN  113 (353)
Q Consensus        71 ~~~~~~k~I~ILGSTGSIGtqTLdVI-~~~pd~F~VvaLaagsN  113 (353)
                      ..+-..|+|.|.|+||++|+..++-+ +..|+.-+|.+|.=.++
T Consensus       114 ~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~  157 (605)
T PLN02503        114 AEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKD  157 (605)
T ss_pred             hhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCC
Confidence            44445689999999999999999755 56787668888875443

>PRK07062 short chain dehydrogenase; Provisional

Probab=90.53  E-value=2.5  Score=38.35  Aligned_cols=42  Identities=21%  Similarity=0.258  Sum_probs=30.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      |.+.|.|+||.||.....-+.+.  .++|+.++  +|.+.+.+..+
T Consensus         9 k~~lItGas~giG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~   50 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEA--GASVAICG--RDEERLASAEA   50 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHH
Confidence            68999999999999999888875  56776543  45555544333

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=90.49  E-value=2.7  Score=39.48  Aligned_cols=93  Identities=18%  Similarity=0.306  Sum_probs=59.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|+|++|++|..++.+.+..  ..+|++++ .++  + .+.++++..+++...+.....+                
T Consensus       178 g~~vlI~g~~g~ig~~~~~~a~~~--g~~vi~~~-~~~--~-~~~~~~~g~~~~~~~~~~~~~~----------------  235 (350)
T cd08274         178 GETVLVTGASGGVGSALVQLAKRR--GAIVIAVA-GAA--K-EEAVRALGADTVILRDAPLLAD----------------  235 (350)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEe-Cch--h-hHHHHhcCCeEEEeCCCccHHH----------------
Confidence            468999999999999999999987  46677765 332  2 3455677765443222221111                


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                           .+......+|+|++.+.| ..+...+.+++.+-++.
T Consensus       236 -----~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v  270 (350)
T cd08274         236 -----AKALGGEPVDVVADVVGG-PLFPDLLRLLRPGGRYV  270 (350)
T ss_pred             -----HHhhCCCCCcEEEecCCH-HHHHHHHHHhccCCEEE
Confidence                 111222358999988665 56777777777665543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK09291 short chain dehydrogenase; Provisional

Probab=90.42  E-value=1.2  Score=39.84  Aligned_cols=49  Identities=20%  Similarity=0.192  Sum_probs=34.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQ  127 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-sNv~lL~~Q~~eFkPk  127 (353)
                      |+|.|.|+||.||.....-+.+.  .++|++++-. .+.+.+.+.+....++
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~   52 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQVTALRAEAARRGLA   52 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCc
Confidence            57999999999999999988875  5788876522 1233444444444444

>TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II

Probab=90.34  E-value=2.3  Score=42.68  Aligned_cols=101  Identities=24%  Similarity=0.331  Sum_probs=66.5

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEecHH
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQ  158 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G~~  158 (353)
                      |+|.|- |.||+..++.+.+.| +++|||+.- .+.+.++..+++++-+.+. ..+....++.+      .+..+ .|. 
T Consensus         1 VaInG~-GrIGr~varav~~~~-d~elVaVnD-~~~~~~a~lA~~lgyds~~-~~~~~~~~~~~------~~l~v-~g~-   68 (333)
T TIGR01546         1 VGVNGY-GTIGKRVADAVTKQD-DMKLVGVTK-TSPDFEAYRAKELGIPVYA-ASEEFIPRFEE------AGIEV-AGT-   68 (333)
T ss_pred             CEEECC-cHHHHHHHHHHhhCC-CcEEEEEec-CChHHHHHHHHHhCCCEEe-ecCCcceEecc------CceEe-cCC-
Confidence            467776 999999999998874 599999986 7788888888888766655 22211111111      12223 232 


Q ss_pred             HHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          159 GVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       159 gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                       +.++.  .++|+|+.+-..+-++.---.-++.|++
T Consensus        69 -~eeLl--~~vDiVve~Tp~~~~~~na~~~~~~Gak  101 (333)
T TIGR01546        69 -LEDLL--EKVDIVVDATPGGIGAKNKPLYEKAGVK  101 (333)
T ss_pred             -HHHHh--hcCCEEEECCCCCCChhhHHHHHhCCcC
Confidence             55555  3699999998777777655555566644

All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's.

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=90.33  E-value=0.63  Score=47.22  Aligned_cols=50  Identities=18%  Similarity=0.406  Sum_probs=34.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV  129 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V  129 (353)
                      |.||+|+|+||..|.+.+.++.+||+ +++...+ .+..  --+-.++..|...
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~-ve~~~~s-s~~~--~g~~~~~~~p~l~   51 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPD-VELILIS-SRER--AGKPVSDVHPNLR   51 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCC-eEEEEee-chhh--cCCchHHhCcccc
Confidence            56899999999999999999999997 7744433 2221  1222445555554

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=90.24  E-value=3.5  Score=37.23  Aligned_cols=63  Identities=19%  Similarity=0.172  Sum_probs=38.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEE-EeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~-i~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+.+.+.++  .++|+.+.  ++.+.   +.++.++...+... ..|-...+.+++
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~--r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~   77 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATA--GASVVVSD--INADAANHVVDEIQQLGGQAFACRCDITSEQELSA   77 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence            478999999999999999998876  56777643  33343   34444443333322 234333444443

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=90.23  E-value=0.27  Score=49.89  Aligned_cols=27  Identities=26%  Similarity=0.551  Sum_probs=23.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR  104 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~  104 (353)
                      |+|+|+||||-+|+..++++.++|+ |.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~-fp   27 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERD-FD   27 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCC-Cc
Confidence            5799999999999999999996554 44

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=90.21  E-value=0.33  Score=44.80  Aligned_cols=32  Identities=13%  Similarity=0.253  Sum_probs=27.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +|.|+|+||.||..+++-+.+.  .++|.+++-+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~   32 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRS   32 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCC
Confidence            4899999999999999988764  6889888743

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06123 short chain dehydrogenase; Provisional

Probab=90.19  E-value=3.9  Score=36.44  Aligned_cols=41  Identities=24%  Similarity=0.255  Sum_probs=29.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q  120 (353)
                      |.+.|.|+||.||....+-+.+.  .+.|+ +...++-+.+.++
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~--G~~vv-~~~~~~~~~~~~~   43 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAER--GYAVC-LNYLRNRDAAEAV   43 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC--CCeEE-EecCCCHHHHHHH
Confidence            57999999999999998888775  46665 4444555544443

>PLN02214 cinnamoyl-CoA reductase

Probab=90.13  E-value=1.7  Score=42.05  Aligned_cols=33  Identities=24%  Similarity=0.368  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +|+|.|.|+||+||....+-+.+.  .++|++++-
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r   42 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLER--GYTVKGTVR   42 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeC
Confidence            468999999999999999988775  588988763

>PRK08251 short chain dehydrogenase; Provisional

Probab=90.11  E-value=3.5  Score=36.78  Aligned_cols=41  Identities=15%  Similarity=0.170  Sum_probs=30.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q  120 (353)
                      .|++.|.|+||.||....+-+.+..  .+|+.++  +|.+.+.+.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g--~~v~~~~--r~~~~~~~~   42 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKG--RDLALCA--RRTDRLEEL   42 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEe--CCHHHHHHH
Confidence            3679999999999999999998874  5666553  455554443

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=90.10  E-value=3.3  Score=39.51  Aligned_cols=98  Identities=14%  Similarity=0.138  Sum_probs=59.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      ..++|.|.| +|.+|..++.+.+..  .. +|++.+  ++-+.+ ++++++..+.+.-.++....++.            
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~--G~~~v~~~~--~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~------------  238 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLA--GARRVIVID--GSPERL-ELAREFGADATIDIDELPDPQRR------------  238 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHc--CCCeEEEEc--CCHHHH-HHHHHcCCCeEEcCcccccHHHH------------
Confidence            345799998 599999999999986  45 666654  333333 45567776655433222111111            


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                          +.+.++.....+|+|++.+.|...+...+..++.+-+
T Consensus       239 ----~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  275 (361)
T cd08231         239 ----AIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGT  275 (361)
T ss_pred             ----HHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCE
Confidence                1334444445689999986555566667776655433

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=90.08  E-value=1.3  Score=44.84  Aligned_cols=52  Identities=33%  Similarity=0.404  Sum_probs=38.9

Q ss_pred             eeEEEEecCChHhHHHHHHHH-hCCCceEEE---EEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVA-EHEDKFRVV---ALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~-~~pd~F~Vv---aLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      +++.|-|..|+||.+-+.-+- ++|| ++|+   .|+...|.+-|.....  +|++.++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn~~~l~~~~~--~~~~~fv   56 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGNLENLADVED--SPRYRFV   56 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCCHHHHHhhhc--CCCceEE
Confidence            478999999999999987654 5676 5444   5688889999876655  4555554

>PRK06114 short chain dehydrogenase; Provisional

Probab=90.04  E-value=4.5  Score=36.62  Aligned_cols=51  Identities=14%  Similarity=0.118  Sum_probs=35.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQV  128 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~eFkPk~  128 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.-..  ..+.+.++++....+.
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~   60 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDGLAETAEHIEAAGRRA   60 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCce
Confidence            368999999999999999998875  57888765332  2344555554444333

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=90.00  E-value=0.43  Score=50.60  Aligned_cols=39  Identities=21%  Similarity=0.335  Sum_probs=30.5

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        71 ~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ++....++|.|.|+||+||+...+-+.+. ..++|+++.-
T Consensus       310 ~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~-~g~~V~~l~r  348 (660)
T PRK08125        310 CSAKRRTRVLILGVNGFIGNHLTERLLRD-DNYEVYGLDI  348 (660)
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHhC-CCcEEEEEeC
Confidence            33333457999999999999999988764 2589999874

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=89.98  E-value=2.5  Score=39.09  Aligned_cols=94  Identities=23%  Similarity=0.361  Sum_probs=59.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++|++|..++.+.+..  .++|++.+..  -++ .+.++++..+.+.-.++.   . .              
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~--g~~v~~~~~~--~~~-~~~~~~~g~~~v~~~~~~---~-~--------------  203 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKL--GYEVVASTGK--ADA-ADYLKKLGAKEVIPREEL---Q-E--------------  203 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCeEEEEecC--HHH-HHHHHHcCCCEEEcchhH---H-H--------------
Confidence            358999999999999999999987  5677766433  233 344467776555322111   0 1              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                        +.+.++ ....+|.|++.+.| ..+...+.+++.+-++.
T Consensus       204 --~~~~~~-~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i  240 (326)
T cd08289         204 --ESIKPL-EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVA  240 (326)
T ss_pred             --HHHHhh-ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEE
Confidence              111222 12358999998655 67777788876655543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=89.95  E-value=3.1  Score=36.67  Aligned_cols=41  Identities=27%  Similarity=0.289  Sum_probs=31.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q  120 (353)
                      |.+.|.|+||.||..+.+-+.+.  .++|+++.. ++-+.+.+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r-~~~~~~~~~   41 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCG-PNEERAEAW   41 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeC-CCHHHHHHH
Confidence            57899999999999999999875  577877654 455554443

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=89.94  E-value=3.8  Score=36.23  Aligned_cols=43  Identities=23%  Similarity=0.241  Sum_probs=31.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      +|++.|.|+||.||..+.+-+.+.  .++|+.+.-+.+ +.+.+..
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~-~~~~~~~   44 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGN-DCAKDWF   44 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcH-HHHHHHH
Confidence            468999999999999999988875  478887754333 4444333

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=89.90  E-value=0.33  Score=44.05  Aligned_cols=29  Identities=28%  Similarity=0.386  Sum_probs=25.5

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |.|+|+||+||+...+-+.+.  .++|++++
T Consensus         1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~   29 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKD--GHEVTILT   29 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHc--CCEEEEEe
Confidence            579999999999999988764  58999987

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=89.88  E-value=4.7  Score=32.78  Aligned_cols=23  Identities=22%  Similarity=0.354  Sum_probs=20.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEH   99 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~   99 (353)
                      |++.|.|+||+||....+.+.+.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~   23 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAER   23 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHh
Confidence            57899999999999999998875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=89.87  E-value=3.7  Score=36.38  Aligned_cols=44  Identities=18%  Similarity=0.291  Sum_probs=31.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      .+++.|.|++|.||..+...+.+.  .++|+.+.  ++-+.+.++.++
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~--r~~~~~~~~~~~   48 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQK--GAKLALID--LNQEKLEEAVAE   48 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            357999999999999999998876  46666543  444555554443

>PRK07985 oxidoreductase; Provisional

Probab=89.74  E-value=3.7  Score=38.75  Aligned_cols=64  Identities=13%  Similarity=0.001  Sum_probs=39.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC---HHHHHHHHHhhCCCEEE-EeCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN---ITLLADQVKRFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN---v~lL~~Q~~eFkPk~V~-i~de~~~~~l~~  142 (353)
                      |++.|.|+||.||.++.+-+.+.  .++|+.+.-..+   .+.+.+..++...+... ..|-...+.+..
T Consensus        50 k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~  117 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARS  117 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHH
Confidence            68999999999999999999876  577876432222   34454444444333322 234444444443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=89.66  E-value=3.7  Score=36.05  Aligned_cols=31  Identities=19%  Similarity=0.187  Sum_probs=25.5

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +.|.|+||.||....+-+.+.  .++|+.++.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~   31 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRS   31 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCC
Confidence            478999999999999998875  5788777644

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05876 short chain dehydrogenase; Provisional

Probab=89.66  E-value=3.6  Score=38.35  Aligned_cols=45  Identities=22%  Similarity=0.181  Sum_probs=33.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|.+.|.|+||.||....+-+.+.  .++|+..  .+|.+.+.+.++++
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~--~r~~~~l~~~~~~l   50 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARR--GARVVLG--DVDKPGLRQAVNHL   50 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHH
Confidence            467999999999999999988875  5677653  35566666655544

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=89.64  E-value=2  Score=40.47  Aligned_cols=34  Identities=21%  Similarity=0.304  Sum_probs=28.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      .|+|.|.|+||+||....+-+.+.  .++|++++-+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~   38 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLR--GYTVKATVRD   38 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECC
Confidence            468999999999999999988875  5788877543

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=89.56  E-value=0.4  Score=47.47  Aligned_cols=35  Identities=29%  Similarity=0.559  Sum_probs=28.5

Q ss_pred             eEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCC
Q 018600           78 PISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSN  113 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaagsN  113 (353)
                      +|+|+||||.+|...++.+.+  || .++++.++..++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp-~~~l~~~as~~~   37 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFP-IDKLVLLASDRS   37 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCC-hhhEEEEecccc
Confidence            589999999999999999988  66 467776655543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=89.56  E-value=0.42  Score=44.48  Aligned_cols=32  Identities=22%  Similarity=0.384  Sum_probs=27.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r   36 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQR--GYTVKATVR   36 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHC--CCEEEEEEc
Confidence            68999999999999999988875  578888764

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=89.54  E-value=5.4  Score=36.69  Aligned_cols=95  Identities=17%  Similarity=0.189  Sum_probs=57.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ...+|.|.|++|.+|..++.+.+.+  ..+|++++  ++-+. .+.++++..+.+.-..+...                 
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~--g~~v~~~~--~~~~~-~~~~~~~g~~~~~~~~~~~~-----------------  199 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAA--GATVVGAA--GGPAK-TALVRALGADVAVDYTRPDW-----------------  199 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEe--CCHHH-HHHHHHcCCCEEEecCCccH-----------------
Confidence            3457999999999999999999987  46777764  23333 34456676655432211111                 


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                        .+.+.+......+|+|++.+.|-. ....+.++..+-+
T Consensus       200 --~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~  236 (324)
T cd08244         200 --PDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPGGR  236 (324)
T ss_pred             --HHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccCcE
Confidence              112222333345899999876654 4666777655433

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=89.49  E-value=3.4  Score=41.17  Aligned_cols=62  Identities=23%  Similarity=0.211  Sum_probs=44.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIK  141 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~  141 (353)
                      |++.|.|+||.||..+.+.+.+.  ..+|+.+....+.+.+.+.+.+.+...+. .|-...+.++
T Consensus       211 ~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~-~Dv~~~~~~~  272 (450)
T PRK08261        211 KVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVANRVGGTALA-LDITAPDAPA  272 (450)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEE-EeCCCHHHHH
Confidence            68999999999999999998876  57888887666777777777766544433 3433333333

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=89.49  E-value=4.5  Score=43.75  Aligned_cols=155  Identities=17%  Similarity=0.206  Sum_probs=104.5

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEE---------------eecCCHHHHHHHHHhhCCCEEEEeCccch-
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL---------------AAGSNITLLADQVKRFKPQVVAVRNESLL-  137 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaL---------------aagsNv~lL~~Q~~eFkPk~V~i~de~~~-  137 (353)
                      .+.+++.|+|| |+.|.+.++-.+++|+ |++||.               -.-.-.+ +.+++++.+.+.+.++-++.- 
T Consensus       114 ~~~~r~lIiGA-G~ag~~l~r~~~~~~~-~~pV~fiDdd~~~~g~~i~Gv~V~g~~~-i~~~v~~~~~~~iiiAips~~~  190 (588)
T COG1086         114 DNRIRLLIIGA-GSAGDLLLRALRRDPE-YTPVAFLDDDPDLTGMKIRGVPVLGRIE-IERVVEELGIQLILIAIPSASQ  190 (588)
T ss_pred             cCCCceEEEcC-chHHHHHHHHHHhCCC-cceEEEECCChhhcCCEEeceeeechhH-HHHHHHHcCCceEEEecCCCCH
Confidence            45578999998 7889999999999988 887764               3334456 899999999998888765543 


Q ss_pred             ---HHHHHHhhcCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecc------c
Q 018600          138 ---DEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG------P  208 (353)
Q Consensus       138 ---~~l~~~l~~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG------~  208 (353)
                         .++-+.+...+..++++..-+.+.+.... =-|+-+.=+=|-.=..|-.+.+.+    .+-||-.||.||      .
T Consensus       191 ~~~~~i~~~l~~~~~~v~~lP~~~~l~~~~~~-lreI~ieDLLgR~pV~~d~~~i~~----~~~gK~vLVTGagGSiGse  265 (588)
T COG1086         191 EERRRILLRLARTGIAVRILPQLTDLKDLNGQ-LREIEIEDLLGRPPVALDTELIGA----MLTGKTVLVTGGGGSIGSE  265 (588)
T ss_pred             HHHHHHHHHHHhcCCcEEecCcHHHHHHhccc-cccCCHHHHhCCCCCCCCHHHHHh----HcCCCEEEEeCCCCcHHHH
Confidence               22333344455677888777776652221 123333333444444444444443    355677788876      4


Q ss_pred             chhHHhhhcCCeEeecCCchhHHHHhhc
Q 018600          209 FVLPLAHKHNIKILPADSEHSAIFQCIQ  236 (353)
Q Consensus       209 li~~~a~~~~~~IlPVDSEHsAIfQ~L~  236 (353)
                      +..+.++.+-.+|+=.|.--.++||.-+
T Consensus       266 l~~qil~~~p~~i~l~~~~E~~~~~i~~  293 (588)
T COG1086         266 LCRQILKFNPKEIILFSRDEYKLYLIDM  293 (588)
T ss_pred             HHHHHHhcCCCEEEEecCchHHHHHHHH
Confidence            6677777777889999988888888754

>PRK05855 short chain dehydrogenase; Validated

Probab=89.46  E-value=3.2  Score=41.51  Aligned_cols=43  Identities=23%  Similarity=0.180  Sum_probs=32.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      +++.|.|+||.||.++.+-+.+.  .++|+.++  +|.+.+.+.+++
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~--r~~~~~~~~~~~  358 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFARE--GAEVVASD--IDEAAAERTAEL  358 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            57999999999999999998875  56766543  466666554443

>PRK13535 erythrose 4-phosphate dehydrogenase; Provisional

Probab=89.45  E-value=3  Score=41.94  Aligned_cols=111  Identities=21%  Similarity=0.232  Sum_probs=66.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCCHHHHHHHHH------hhCCCEEEEeCccchHHHHHHhhcCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaagsNv~lL~~Q~~------eFkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      .||+|.|. |=||+..|+++.+  +|++++|+|+---...+-++-..+      +|+. -|-..+..        +.-.+
T Consensus         2 ~~IaInGf-GrIGR~~lr~l~e~~~~~~l~vvaind~~~~~~~ayll~ydS~hg~~~~-~v~~~~~~--------l~v~g   71 (336)
T PRK13535          2 IRVAINGF-GRIGRNVLRALYESGRRAEITVVAINELADAEGMAHLLKYDTSHGRFAW-DVRQERDQ--------LFVGD   71 (336)
T ss_pred             eEEEEECc-CHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHhhhccCCCCCCC-cEEecCCE--------EEECC
Confidence            47999999 9999999999876  468899999865556666655443      1211 11111110        10011


Q ss_pred             CCcEEEecHHHHHHHh-cCCCCcEEEEeccCccCcHHHHHHHHcC-CcEeee
Q 018600          149 EKPEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALA  198 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~a-~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g-K~IaLA  198 (353)
                      ..++++.. ....++- ...++|+|+.+-.++.--+-.-.++++| |+|-+.
T Consensus        72 ~~i~v~~~-~~p~~~~w~~~gvDiVle~tG~~~s~~~a~~~l~aGAk~V~iS  122 (336)
T PRK13535         72 DAIRLLHE-RDIASLPWRELGVDVVLDCTGVYGSREDGEAHIAAGAKKVLFS  122 (336)
T ss_pred             EEEEEEEc-CCcccCcccccCCCEEEEccchhhhHHHHHHHHHcCCEEEEec
Confidence            22334322 2233221 1247999999987777767677888998 444443

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=89.45  E-value=1.9  Score=41.42  Aligned_cols=31  Identities=26%  Similarity=0.395  Sum_probs=27.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ++|.|.|+||+||....+-+.+.  .++|+++.
T Consensus        11 ~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~   41 (353)
T PLN02896         11 GTYCVTGATGYIGSWLVKLLLQR--GYTVHATL   41 (353)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe
Confidence            47999999999999999998875  58899874

>KOG4777 consensus Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=89.45  E-value=0.28  Score=48.73  Aligned_cols=31  Identities=32%  Similarity=0.677  Sum_probs=27.2

Q ss_pred             eeEE-EEecCChHhHHHHHHHHhCCCceEEEEE
Q 018600           77 KPIS-VLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        77 k~I~-ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      |+++ |||+||++|+-.+.++..||. |++--|
T Consensus         4 kk~a~vlGaTGaVGQrFi~lLsdhP~-f~ikvL   35 (361)
T KOG4777|consen    4 KKSAPVLGATGAVGQRFISLLSDHPY-FSIKVL   35 (361)
T ss_pred             ccccceeeccchhHHHHHHHhccCCc-ceeeee
Confidence            5566 999999999999999999986 777766

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=89.44  E-value=3.7  Score=37.59  Aligned_cols=44  Identities=20%  Similarity=0.190  Sum_probs=31.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      .|++.|.|+||.||.....-+.+.  .++|+.+.  +|-+.+.+..++
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~   53 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARA--GAKVAILD--RNQEKAEAVVAE   53 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            378999999999999999998875  46776643  445544444433

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=89.37  E-value=3.2  Score=38.61  Aligned_cols=92  Identities=14%  Similarity=0.137  Sum_probs=58.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ++|.|.|+ |.||..++.+.+..  .++ |++.  .++-+++ +.++++..+.+.-.+ +.    .              
T Consensus       122 ~~VlV~G~-G~vG~~~~~~ak~~--G~~~Vi~~--~~~~~r~-~~a~~~Ga~~~i~~~-~~----~--------------  176 (280)
T TIGR03366       122 RRVLVVGA-GMLGLTAAAAAAAA--GAARVVAA--DPSPDRR-ELALSFGATALAEPE-VL----A--------------  176 (280)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEE--CCCHHHH-HHHHHcCCcEecCch-hh----H--------------
Confidence            57999987 99999999999876  455 5554  3444554 567888876654211 10    1              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                        +.+.++.....+|+|+++..+-..+.-.+..++.+=++
T Consensus       177 --~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~i  214 (280)
T TIGR03366       177 --ERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTA  214 (280)
T ss_pred             --HHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEE
Confidence              11222323336899999876666677777777666444

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK14982 acyl-ACP reductase; Provisional

Probab=89.28  E-value=0.82  Score=45.93  Aligned_cols=46  Identities=15%  Similarity=0.289  Sum_probs=32.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      |+|.|+|+|||||.....-+.+...-.+|+.+  +++.+.+.+...++
T Consensus       156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv--~R~~~rl~~La~el  201 (340)
T PRK14982        156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLV--ARQQERLQELQAEL  201 (340)
T ss_pred             CEEEEEccChHHHHHHHHHHHhhCCCCEEEEE--cCCHHHHHHHHHHh
Confidence            67999999999999999999743111234332  46777777766655

>PRK07023 short chain dehydrogenase; Provisional

Probab=89.26  E-value=0.44  Score=42.66  Aligned_cols=34  Identities=15%  Similarity=0.225  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      |+++.|.|+||.||.++..-+.+.  .++|+.++-+
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~   34 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARS   34 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecC
Confidence            457999999999999999998875  5788876543

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=89.22  E-value=3.3  Score=41.96  Aligned_cols=31  Identities=26%  Similarity=0.261  Sum_probs=24.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|+|.|+|+ |-+|..+.+.+++.  .++|+..-
T Consensus        16 ~~~v~viG~-G~~G~~~A~~L~~~--G~~V~~~d   46 (480)
T PRK01438         16 GLRVVVAGL-GVSGFAAADALLEL--GARVTVVD   46 (480)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEe
Confidence            468999997 88999999999875  56776643

>PRK05884 short chain dehydrogenase; Provisional

Probab=89.22  E-value=2.7  Score=37.84  Aligned_cols=60  Identities=15%  Similarity=0.218  Sum_probs=40.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      |+.|.|+||.||......+.+.  .++|+.+  .+|.+.+.+.+++.+.+.+ ..|-...+.+++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~--g~~v~~~--~r~~~~~~~~~~~~~~~~~-~~D~~~~~~v~~   61 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRND--GHKVTLV--GARRDDLEVAAKELDVDAI-VCDNTDPASLEE   61 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHhccCcEE-ecCCCCHHHHHH
Confidence            6999999999999999988765  4677765  4577777776666554433 234443444443

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=89.20  E-value=5.7  Score=36.58  Aligned_cols=89  Identities=15%  Similarity=0.231  Sum_probs=54.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..++.|.|+||++|..+..+.+..  .++|++++  ++-+. .+.++++..+.+.-. .+    +.+.+           
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~--g~~v~~~~--~~~~~-~~~~~~~~~~~~~~~-~~----~~~~~-----------  221 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKAL--GARVIAVT--RSPEK-LKILKELGADYVIDG-SK----FSEDV-----------  221 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEe--CCHHH-HHHHHHcCCcEEEec-HH----HHHHH-----------
Confidence            458999999999999999999987  57777765  33333 334455554443311 11    22211           


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                           .+.   .++|+|++.+. ...+...+.++..+-+
T Consensus       222 -----~~~---~~~d~v~~~~g-~~~~~~~~~~~~~~g~  251 (332)
T cd08259         222 -----KKL---GGADVVIELVG-SPTIEESLRSLNKGGR  251 (332)
T ss_pred             -----Hhc---cCCCEEEECCC-hHHHHHHHHHhhcCCE
Confidence                 111   26899998754 4457777777755433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=89.06  E-value=3  Score=38.23  Aligned_cols=30  Identities=37%  Similarity=0.500  Sum_probs=25.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|.|+|+||.||..+.+-+.++  .++|+++.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~   30 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLD   30 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEe
Confidence            5899999999999999988775  57787663

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK06484 short chain dehydrogenase; Validated

Probab=89.04  E-value=6.2  Score=39.81  Aligned_cols=64  Identities=13%  Similarity=0.202  Sum_probs=44.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      ..|.+.|.|+||-||..+.+-+.+.  .++|+.+  .+|.+.+.+..++...+...+ .|-...+.+++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~  332 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAA--GDRLLII--DRDAEGAKKLAEALGDEHLSVQADITDEAAVES  332 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCceeEEEccCCCHHHHHH
Confidence            4578999999999999999888876  4677765  367777777777776555432 34444444444

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=89.02  E-value=6.9  Score=37.10  Aligned_cols=29  Identities=21%  Similarity=0.214  Sum_probs=23.7

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|+|+| +|.||.+...-+++.  .++|.+..
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~--g~~V~~~d   30 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSL--GHTVYGVS   30 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHC--CCEEEEEE
Confidence            699999 799999998888876  46776654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=89.00  E-value=1.7  Score=43.04  Aligned_cols=42  Identities=17%  Similarity=0.329  Sum_probs=28.4

Q ss_pred             EEEEecCChHhHHHHHHHHhC-CCceEEEEEeecCCHHHHHHHHHhh
Q 018600           79 ISVLGSTGSIGTQTLDIVAEH-EDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~-pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      |.|.|+|||||.....-+.++ |.  +|+.+.  +|-..|.+.-+++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~--~lil~d--~~E~~l~~l~~~l   43 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPK--KLILFD--RDENKLYELEREL   43 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-S--EEEEEE--S-HHHHHHHHHHC
T ss_pred             CEEEccccHHHHHHHHHHHhcCCC--eEEEeC--CChhHHHHHHHHH
Confidence            679999999999988777654 43  344433  5556666666666

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=89.00  E-value=0.49  Score=48.13  Aligned_cols=32  Identities=22%  Similarity=0.343  Sum_probs=27.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ++||.|.|+||+||.+.++-+.+.  .++|+++.
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ld  151 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVID  151 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEe
Confidence            457999999999999999988775  68899875

>PRK06953 short chain dehydrogenase; Provisional

Probab=88.99  E-value=4.4  Score=35.95  Aligned_cols=39  Identities=26%  Similarity=0.410  Sum_probs=30.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~  118 (353)
                      ||++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~--r~~~~~~   39 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATA--RDAAALA   39 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEE--CCHHHHH
Confidence            578999999999999999988765  57877753  4555544

>PRK06484 short chain dehydrogenase; Validated

Probab=88.96  E-value=3.9  Score=41.27  Aligned_cols=63  Identities=22%  Similarity=0.286  Sum_probs=44.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|.+.|.|+|+-||..+.+-+.+.  .++|+.+  .++.+.+.+..++...+...+ .|-...+.+++
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   68 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARA--GDQVVVA--DRNVERARERADSLGPDHHALAMDVSDEAQIRE   68 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCceeEEEeccCCHHHHHH
Confidence            378999999999999999998876  5677665  356788888877776554333 34343444444

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=88.87  E-value=4.7  Score=37.18  Aligned_cols=96  Identities=13%  Similarity=0.130  Sum_probs=56.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++|+||..++.+.+..  ..+++..+...  +. .+.++++..+.+.-.++.   .+.              
T Consensus       140 g~~vlI~g~~g~ig~~~~~~a~~~--G~~v~~~~~~~--~~-~~~~~~~g~~~~~~~~~~---~~~--------------  197 (324)
T cd08292         140 GQWLIQNAAGGAVGKLVAMLAAAR--GINVINLVRRD--AG-VAELRALGIGPVVSTEQP---GWQ--------------  197 (324)
T ss_pred             CCEEEEcccccHHHHHHHHHHHHC--CCeEEEEecCH--HH-HHHHHhcCCCEEEcCCCc---hHH--------------
Confidence            357999999999999999999987  45676654322  22 233344555444322211   111              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                        +.+.++.....+|+|++...| ..+...+.+++.+-++.
T Consensus       198 --~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v  235 (324)
T cd08292         198 --DKVREAAGGAPISVALDSVGG-KLAGELLSLLGEGGTLV  235 (324)
T ss_pred             --HHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCCcEEE
Confidence              122333333468999987655 45666667776554444

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=88.80  E-value=4.5  Score=38.02  Aligned_cols=94  Identities=16%  Similarity=0.133  Sum_probs=59.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc-cchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de-~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|.|++|+||..++.+.+..  ..+|++.+.  +-++ .+.++++..+.+.-.++ +...+.               
T Consensus       140 ~~VLI~ga~g~vG~~aiqlAk~~--G~~Vi~~~~--s~~~-~~~~~~lGa~~vi~~~~~~~~~~~---------------  199 (325)
T TIGR02825       140 ETVMVNAAAGAVGSVVGQIAKLK--GCKVVGAAG--SDEK-VAYLKKLGFDVAFNYKTVKSLEET---------------  199 (325)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeC--CHHH-HHHHHHcCCCEEEeccccccHHHH---------------
Confidence            58999999999999999999876  457776553  3333 44557788877664332 111111               


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                          +.++ ....+|+|++++.| ..+...+..++.|=++.
T Consensus       200 ----~~~~-~~~gvdvv~d~~G~-~~~~~~~~~l~~~G~iv  234 (325)
T TIGR02825       200 ----LKKA-SPDGYDCYFDNVGG-EFSNTVIGQMKKFGRIA  234 (325)
T ss_pred             ----HHHh-CCCCeEEEEECCCH-HHHHHHHHHhCcCcEEE
Confidence                1111 12358999987654 44566666666554443

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=88.72  E-value=3.7  Score=37.24  Aligned_cols=64  Identities=14%  Similarity=0.169  Sum_probs=39.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEE-EeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVA-VRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~---eFkPk~V~-i~de~~~~~l~~  142 (353)
                      .|++.|.|++|.||....+.+.+.  ..+|+. .+.++.+.+.++..   ....+... ..|-...+.+++
T Consensus         7 ~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi-~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~   74 (261)
T PRK08936          7 GKVVVITGGSTGLGRAMAVRFGKE--KAKVVI-NYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVN   74 (261)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEE-EeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHH
Confidence            468999999999999999988876  456664 45556555444433   33333322 234444444444

>PRK07677 short chain dehydrogenase; Provisional

Probab=88.59  E-value=5.2  Score=36.11  Aligned_cols=42  Identities=19%  Similarity=0.211  Sum_probs=30.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      |++.|.|+||.||......+.+.  ..+|+.+.  +|.+.+.+...
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~--r~~~~~~~~~~   43 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEE--GANVVITG--RTKEKLEEAKL   43 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHH
Confidence            67999999999999999999876  45776653  44444444433

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=88.46  E-value=5.7  Score=37.95  Aligned_cols=63  Identities=11%  Similarity=0.245  Sum_probs=40.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC---CCEEEE-eCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK---PQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk---Pk~V~i-~de~~~~~l~~  142 (353)
                      |.+.|.|+|+.||..+..-+.+.. .++|+.++  +|.+.+.+.+++..   .++.++ .|-...+.++.
T Consensus         4 k~vlITGas~GIG~aia~~L~~~G-~~~V~l~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~   70 (314)
T TIGR01289         4 PTVIITGASSGLGLYAAKALAATG-EWHVIMAC--RDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQ   70 (314)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcC-CCEEEEEe--CCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHH
Confidence            579999999999999998888753 16776653  56676665555542   222222 45444544544

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=88.39  E-value=3.8  Score=39.46  Aligned_cols=94  Identities=12%  Similarity=0.142  Sum_probs=57.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEeCc-cchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~de-~~~~~l~~~l~~~~~~~~v  153 (353)
                      ..+|.|.|+ |.||..++.+.+..  ..+ |+++..  +-++ .+.++++..+.+.-..+ +..+.              
T Consensus       177 g~~VlV~G~-g~vG~~a~~~ak~~--G~~~Vi~~~~--~~~~-~~~~~~~Ga~~~i~~~~~~~~~~--------------  236 (358)
T TIGR03451       177 GDSVAVIGC-GGVGDAAIAGAALA--GASKIIAVDI--DDRK-LEWAREFGATHTVNSSGTDPVEA--------------  236 (358)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcC--CHHH-HHHHHHcCCceEEcCCCcCHHHH--------------
Confidence            467999985 99999999999976  454 666533  3333 34557787766543222 11111              


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                            +.++.....+|+|++++.+-..+.-.+.+++.|=++
T Consensus       237 ------i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~i  272 (358)
T TIGR03451       237 ------IRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTV  272 (358)
T ss_pred             ------HHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEE
Confidence                  222222335899999876555666666666655443

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK07069 short chain dehydrogenase; Validated

Probab=88.38  E-value=4.5  Score=36.00  Aligned_cols=44  Identities=16%  Similarity=0.195  Sum_probs=31.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      ++.|.|+||.||....+-+.+.  .++|+.+.- ++.+.+.+..+++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r-~~~~~~~~~~~~~   44 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDI-NDAAGLDAFAAEI   44 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHC--CCEEEEEeC-CcchHHHHHHHHH
Confidence            4899999999999999998875  578876653 2244444444333

>PLN02206 UDP-glucuronate decarboxylase

Probab=88.35  E-value=0.57  Score=47.77  Aligned_cols=31  Identities=19%  Similarity=0.343  Sum_probs=27.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +||.|.|+||+||...++-+.+.  .++|+++.
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld  150 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVD  150 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHC--cCEEEEEe
Confidence            57999999999999999988875  67899874

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=88.28  E-value=5  Score=36.82  Aligned_cols=65  Identities=22%  Similarity=0.207  Sum_probs=40.0

Q ss_pred             CeeEEEEec--CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE-EEEeCccchHHHHH
Q 018600           76 PKPISVLGS--TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV-VAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGS--TGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~-V~i~de~~~~~l~~  142 (353)
                      .|.+.|.|+  ++-||..+..-+.+.  .++|+...-++|.+++.+.++++..+. .+..|-...+.+++
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~   74 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLAS   74 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHH
Confidence            368999999  899999999888765  567765443444555555555554332 22234444444443

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=88.27  E-value=4.8  Score=36.81  Aligned_cols=45  Identities=16%  Similarity=0.190  Sum_probs=33.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      +.+.|.|+||.||..+.+-+.+.  .++|+.+ ++++-+.+.+..+++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~-~~~~~~~~~~~~~~l   46 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLH-YHRSAAAASTLAAEL   46 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEE-cCCcHHHHHHHHHHH
Confidence            46899999999999999988875  5677765 555666665555554

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08703 short chain dehydrogenase; Provisional

Probab=88.24  E-value=1.3  Score=39.46  Aligned_cols=43  Identities=23%  Similarity=0.247  Sum_probs=32.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      |++.|.|+||.||....+.+.+.  .++|+.++  +|.+.+.+...+
T Consensus         7 k~vlItG~sggiG~~la~~l~~~--g~~V~~~~--r~~~~~~~~~~~   49 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAA--GATVILVA--RHQKKLEKVYDA   49 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHc--CCEEEEEe--CChHHHHHHHHH
Confidence            68999999999999999999875  57777654  555655554444

>PRK07577 short chain dehydrogenase; Provisional

Probab=88.17  E-value=4  Score=36.03  Aligned_cols=31  Identities=26%  Similarity=0.328  Sum_probs=26.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |++.|.|+||.||.+...-+.+.  .++|+++.
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~   34 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANL--GHQVIGIA   34 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHC--CCEEEEEe
Confidence            67999999999999999988875  47787765

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=88.10  E-value=6.9  Score=35.45  Aligned_cols=95  Identities=14%  Similarity=0.190  Sum_probs=56.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .++|.|.|++|.+|..++.+.+..  ..+|+.++..  -+.+.. .+++..+.+.-.+..   .+               
T Consensus       145 ~~~vli~g~~~~~g~~~~~~~~~~--g~~v~~~~~~--~~~~~~-~~~~g~~~~~~~~~~---~~---------------  201 (328)
T cd08268         145 GDSVLITAASSSVGLAAIQIANAA--GATVIATTRT--SEKRDA-LLALGAAHVIVTDEE---DL---------------  201 (328)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHc--CCEEEEEcCC--HHHHHH-HHHcCCCEEEecCCc---cH---------------
Confidence            357999999999999999999876  4667665432  344333 355554443322211   11               


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                       .+.+.+......+|.+++...| ..+...+.++..+=++
T Consensus       202 -~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~  239 (328)
T cd08268         202 -VAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPGGTL  239 (328)
T ss_pred             -HHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccCCEE
Confidence             1122333333358999988666 6666667766554443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=88.05  E-value=5  Score=38.17  Aligned_cols=98  Identities=15%  Similarity=0.116  Sum_probs=60.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .++|.|+|+ |.+|..++.+.+..  ..+++..+ .++-+++. .++++..+.+.-.++....++               
T Consensus       161 g~~vlV~G~-g~vG~~~~~~a~~~--G~~~v~~~-~~~~~~~~-~~~~~Ga~~~i~~~~~~~~~~---------------  220 (347)
T PRK10309        161 GKNVIIIGA-GTIGLLAIQCAVAL--GAKSVTAI-DINSEKLA-LAKSLGAMQTFNSREMSAPQI---------------  220 (347)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEE-CCCHHHHH-HHHHcCCceEecCcccCHHHH---------------
Confidence            468999985 99999999999987  45533222 34555554 457787766543222112222               


Q ss_pred             cHHHHHHHhcCCCCc-EEEEeccCccCcHHHHHHHHcCCcEeee
Q 018600          156 GEQGVIEAARHPDAV-TVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (353)
Q Consensus       156 G~~gl~~~a~~~~~D-~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA  198 (353)
                           .++.....+| +|++++.+...+.-.+.+++.|-++.+.
T Consensus       221 -----~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~  259 (347)
T PRK10309        221 -----QSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALV  259 (347)
T ss_pred             -----HHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEE
Confidence                 2222223466 8889876666777778888887665443

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=88.05  E-value=2  Score=38.59  Aligned_cols=41  Identities=24%  Similarity=0.240  Sum_probs=30.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~  119 (353)
                      ..|++.|.|+||.||..+..-+.+.  .++|+++.  +|.+.+.+
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~--r~~~~~~~   51 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARH--GATVILLG--RTEEKLEA   51 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEe--CCHHHHHH
Confidence            3468999999999999999998875  57888764  34444433

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=88.00  E-value=11  Score=34.55  Aligned_cols=97  Identities=11%  Similarity=0.138  Sum_probs=60.1

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      ....+|.|.|++|.||..+..+.+..  ..+|++++..  -+. .+++++|..+.+.-..+..   +.            
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~--g~~v~~~~~~--~~~-~~~~~~~g~~~~~~~~~~~---~~------------  196 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLL--GFKTINVVRR--DEQ-VEELKALGADEVIDSSPED---LA------------  196 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHC--CCeEEEEecC--hHH-HHHHHhcCCCEEecccchh---HH------------
Confidence            33468999999999999999999986  5777765533  344 3455777776554332211   11            


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                          +.+.+......+|+|++...| ..+...+..++.+=++
T Consensus       197 ----~~~~~~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~g~~  233 (323)
T cd05282         197 ----QRVKEATGGAGARLALDAVGG-ESATRLARSLRPGGTL  233 (323)
T ss_pred             ----HHHHHHhcCCCceEEEECCCC-HHHHHHHHhhCCCCEE
Confidence                112222233358899987655 4456667777655443

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=87.95  E-value=3.9  Score=38.82  Aligned_cols=54  Identities=22%  Similarity=0.204  Sum_probs=35.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~eFkPk~V~i  131 (353)
                      .|++.|.|++|.||.....-+.+.  ..+|+...-+.  ..+.+.++++....+...+
T Consensus        12 ~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~   67 (306)
T PRK07792         12 GKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASALDASDVLDEIRAAGAKAVAV   67 (306)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchhHHHHHHHHHHhcCCeEEEE
Confidence            367999999999999998888876  45666543222  2445555565555554443

>PLN02650 dihydroflavonol-4-reductase

Probab=87.92  E-value=0.73  Score=44.07  Aligned_cols=33  Identities=24%  Similarity=0.346  Sum_probs=28.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .|+|.|.|+||+||+...+-+.+.  .++|+++.-
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r   37 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLER--GYTVRATVR   37 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEc
Confidence            468999999999999999988875  578988763

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=87.87  E-value=8.2  Score=36.70  Aligned_cols=90  Identities=18%  Similarity=0.259  Sum_probs=58.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++|++|..++.+.+..  .++|++.+ ..  +++ +.+++|..+.+.-....   .+.+             
T Consensus       155 ~~~vlI~ga~g~vg~~~~~~a~~~--G~~v~~~~-~~--~~~-~~~~~~g~~~v~~~~~~---~~~~-------------  212 (339)
T cd08249         155 GKPVLIWGGSSSVGTLAIQLAKLA--GYKVITTA-SP--KNF-DLVKSLGADAVFDYHDP---DVVE-------------  212 (339)
T ss_pred             CCEEEEEcChhHHHHHHHHHHHHc--CCeEEEEE-Cc--ccH-HHHHhcCCCEEEECCCc---hHHH-------------
Confidence            468999999999999999999987  56788776 32  333 23366776555432211   1111             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                         .+.++.. ..+|+|++...+-..+...+.+++.
T Consensus       213 ---~l~~~~~-~~~d~vl~~~g~~~~~~~~~~~l~~  244 (339)
T cd08249         213 ---DIRAATG-GKLRYALDCISTPESAQLCAEALGR  244 (339)
T ss_pred             ---HHHHhcC-CCeeEEEEeeccchHHHHHHHHHhc
Confidence               1222332 3589999876554788888888886

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=87.80  E-value=2.8  Score=39.35  Aligned_cols=33  Identities=21%  Similarity=0.371  Sum_probs=27.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ..|++.|.|+||.||.+..+-+.+.  .++|++++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~   36 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFR--GYTINATV   36 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEE
Confidence            4578999999999999999988765  57887765

>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=87.74  E-value=4.7  Score=41.15  Aligned_cols=153  Identities=13%  Similarity=0.166  Sum_probs=99.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .-|+.|+|+ |.|+.-.+..+-.-| .+++|+|++.. ..+...+.|++++-.                      +++++
T Consensus         6 ~ir~Gi~g~-g~ia~~f~~al~~~p~s~~~Ivava~~-s~~~A~~fAq~~~~~----------------------~~k~y   61 (351)
T KOG2741|consen    6 TIRWGIVGA-GRIARDFVRALHTLPESNHQIVAVADP-SLERAKEFAQRHNIP----------------------NPKAY   61 (351)
T ss_pred             eeEEEEeeh-hHHHHHHHHHhccCcccCcEEEEEecc-cHHHHHHHHHhcCCC----------------------CCccc
Confidence            458999987 456655555555455 37999999988 567666666666521                      23344


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeec--ccchhHHhhhcCCeEe-ecCCchhHH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKIL-PADSEHSAI  231 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~a--G~li~~~a~~~~~~Il-PVDSEHsAI  231 (353)
                      .   +.+++++.+++|+|+.++-=..=-+-...++.+||.|++ -|=.=...  -.-|.++|++.|..+. =.=+-|+=.
T Consensus        62 ~---syEeLakd~~vDvVyi~~~~~qH~evv~l~l~~~K~VL~-EKPla~n~~e~~~iveaA~~rgv~~meg~~~R~~P~  137 (351)
T KOG2741|consen   62 G---SYEELAKDPEVDVVYISTPNPQHYEVVMLALNKGKHVLC-EKPLAMNVAEAEEIVEAAEARGVFFMEGLWWRFFPR  137 (351)
T ss_pred             c---CHHHHhcCCCcCEEEeCCCCccHHHHHHHHHHcCCcEEe-cccccCCHHHHHHHHHHHHHcCcEEEeeeeeecCcH
Confidence            3   456678899999999988777777778889999999543 22111111  1224567777776543 333445544


Q ss_pred             HHhh----cCCCCCCcceEEEEecCCcCCC
Q 018600          232 FQCI----QGLPEGALRRIILTASGGAFRD  257 (353)
Q Consensus       232 fQ~L----~g~~~~~v~kIiLTASGGPFr~  257 (353)
                      ++-|    .+..-.+|+.+.+ +=|+||+.
T Consensus       138 ~~~lke~l~~~~~Gdvk~v~~-~~~f~~~~  166 (351)
T KOG2741|consen  138 YAKLKELLSSGVLGDVKSVEV-EFGFPFPE  166 (351)
T ss_pred             HHHHHHHHhccccccceEEEE-ecCCCcch
Confidence            4433    3556679999999 67788863

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=87.59  E-value=5.8  Score=38.25  Aligned_cols=93  Identities=11%  Similarity=0.161  Sum_probs=58.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ..+|.|.|+ |+||..++.+.+..  .+ +|+++...  -++ .+.++++..+.+.-.++. -..+.+            
T Consensus       188 g~~VlV~G~-g~vG~~a~q~ak~~--G~~~vi~~~~~--~~~-~~~~~~~Ga~~~i~~~~~-~~~~~~------------  248 (369)
T cd08301         188 GSTVAIFGL-GAVGLAVAEGARIR--GASRIIGVDLN--PSK-FEQAKKFGVTEFVNPKDH-DKPVQE------------  248 (369)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCC--HHH-HHHHHHcCCceEEccccc-chhHHH------------
Confidence            368999985 99999999999976  45 57666433  233 445677876655422210 011211            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                          .+.++... .+|+|++++.+-..+...+.+++.|
T Consensus       249 ----~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~  281 (369)
T cd08301         249 ----VIAEMTGG-GVDYSFECTGNIDAMISAFECVHDG  281 (369)
T ss_pred             ----HHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcC
Confidence                22333333 6899999976666777777777763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=87.46  E-value=6.2  Score=36.04  Aligned_cols=46  Identities=17%  Similarity=0.208  Sum_probs=33.6

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 018600           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (353)
Q Consensus        76 ~k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP  126 (353)
                      .|.+.|.|++  +.||..+..-+.+.  .++|+..  .+| +.+.+++++..+
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~--~r~-~~~~~~~~~~~~   54 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYT--YQN-DRMKKSLQKLVD   54 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEe--cCc-hHHHHHHHhhcc
Confidence            4789999999  78999999998875  6777754  345 455566665543

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=87.44  E-value=4.1  Score=38.74  Aligned_cols=95  Identities=14%  Similarity=0.089  Sum_probs=57.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .++|.|.|+ |++|..++.+.+..  .+ .|++.+  ++-+++ ++++++..+.+.-..+..   +.             
T Consensus       173 g~~vlI~g~-g~vG~~a~q~a~~~--G~~~v~~~~--~~~~~~-~~~~~~ga~~~i~~~~~~---~~-------------  230 (351)
T cd08233         173 GDTALVLGA-GPIGLLTILALKAA--GASKIIVSE--PSEARR-ELAEELGATIVLDPTEVD---VV-------------  230 (351)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEC--CCHHHH-HHHHHhCCCEEECCCccC---HH-------------
Confidence            367999985 99999999999986  56 565554  333443 455667766554321111   11             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                         +.+.+......+|.|++.+.+...+...+.+++.+-++
T Consensus       231 ---~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~  268 (351)
T cd08233         231 ---AEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTA  268 (351)
T ss_pred             ---HHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEE
Confidence               12233333335899999865555666677777665543

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=87.37  E-value=9.4  Score=34.28  Aligned_cols=49  Identities=18%  Similarity=0.317  Sum_probs=33.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVV  129 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V  129 (353)
                      .+++.|.|++|+||..+..+.+..  .++|+..+  ++-+.+. .++++..+.+
T Consensus       140 ~~~vlv~g~~~~ig~~~~~~~~~~--g~~v~~~~--~~~~~~~-~~~~~g~~~~  188 (323)
T cd05276         140 GETVLIHGGASGVGTAAIQLAKAL--GARVIATA--GSEEKLE-ACRALGADVA  188 (323)
T ss_pred             CCEEEEEcCcChHHHHHHHHHHHc--CCEEEEEc--CCHHHHH-HHHHcCCCEE
Confidence            368999999999999999999987  45665543  3334333 3356665544

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK07201 short chain dehydrogenase; Provisional

Probab=87.26  E-value=5.4  Score=41.42  Aligned_cols=82  Identities=21%  Similarity=0.193  Sum_probs=50.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EeCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~-i~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.++  +|-+.+.+...+.   ..+... ..|-...+.+++.+.      
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~------  440 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEA--GATVFLVA--RNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVK------  440 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH------
Confidence            368999999999999999988775  57787764  4566665554443   333333 234444444444331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.  .....+|++|+..
T Consensus       441 -------~~~--~~~g~id~li~~A  456 (657)
T PRK07201        441 -------DIL--AEHGHVDYLVNNA  456 (657)
T ss_pred             -------HHH--HhcCCCCEEEECC
Confidence                   111  1234688888873

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=87.19  E-value=2.7  Score=42.33  Aligned_cols=70  Identities=11%  Similarity=0.182  Sum_probs=45.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC----CCEEEEeCccchHHHHHHhhc
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK----PQVVAVRNESLLDEIKEALAN  146 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk----Pk~V~i~de~~~~~l~~~l~~  146 (353)
                      +.++|.|.||||+||.-.++.+-+.  .|+|.|..=...-++-.+-.++++    .-.++..|-..++.+..++.+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhC
Confidence            5678999999999999999988775  899999763332222223344443    133444555555666666554

>cd08230 glucose_DH Glucose dehydrogenase

Probab=87.13  E-value=3.5  Score=39.53  Aligned_cols=92  Identities=16%  Similarity=0.142  Sum_probs=55.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .++|.|+|+ |.||..+..+++..  ..+|++..... +-+++ +.++++..+++. ..++..   .             
T Consensus       173 g~~vlI~G~-G~vG~~a~q~ak~~--G~~vi~~~~~~~~~~~~-~~~~~~Ga~~v~-~~~~~~---~-------------  231 (355)
T cd08230         173 PRRALVLGA-GPIGLLAALLLRLR--GFEVYVLNRRDPPDPKA-DIVEELGATYVN-SSKTPV---A-------------  231 (355)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCeEEEEecCCCCHHHH-HHHHHcCCEEec-CCccch---h-------------
Confidence            357999996 99999999999886  45788765421 33443 367788887642 111100   0             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                         + ..   ....+|+|+++..+-..+.-.+.+++.|=++
T Consensus       232 ---~-~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~  265 (355)
T cd08230         232 ---E-VK---LVGEFDLIIEATGVPPLAFEALPALAPNGVV  265 (355)
T ss_pred             ---h-hh---hcCCCCEEEECcCCHHHHHHHHHHccCCcEE
Confidence               0 01   1236899999865444455555666555433

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN00198 anthocyanidin reductase; Provisional

Probab=87.08  E-value=0.83  Score=43.37  Aligned_cols=33  Identities=18%  Similarity=0.363  Sum_probs=28.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +|+|.|.|+||+||+...+-+.+.  .++|+++.-
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r   41 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVR   41 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHC--CCEEEEEEC
Confidence            468999999999999999988875  578887763

>PRK13011 formyltetrahydrofolate deformylase; Reviewed

Probab=87.03  E-value=7.1  Score=38.23  Aligned_cols=131  Identities=13%  Similarity=0.151  Sum_probs=78.7

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCC---CceEEEEEeec-CCHHHHHHHHHhhCCCEEEEe--Cc--cch-HHHHHHh
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHE---DKFRVVALAAG-SNITLLADQVKRFKPQVVAVR--NE--SLL-DEIKEAL  144 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~p---d~F~VvaLaag-sNv~lL~~Q~~eFkPk~V~i~--de--~~~-~~l~~~l  144 (353)
                      ..++||+||||.+  |++...++....   -+++|+++.++ .++..   .++++.-.+..+.  ++  +.+ .++.+.+
T Consensus        87 ~~~~ri~vl~Sg~--g~nl~al~~~~~~~~~~~~i~~visn~~~~~~---lA~~~gIp~~~~~~~~~~~~~~~~~~~~~l  161 (286)
T PRK13011         87 AARPKVLIMVSKF--DHCLNDLLYRWRIGELPMDIVGVVSNHPDLEP---LAAWHGIPFHHFPITPDTKPQQEAQVLDVV  161 (286)
T ss_pred             ccCceEEEEEcCC--cccHHHHHHHHHcCCCCcEEEEEEECCccHHH---HHHHhCCCEEEeCCCcCchhhhHHHHHHHH
Confidence            3457899999986  888888886532   25899998764 35444   4888887776652  11  111 1233334


Q ss_pred             hcCCCCcEEEecHHHHH--HHhcCCCCcEEEE----eccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          145 ANVEEKPEILAGEQGVI--EAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       145 ~~~~~~~~v~~G~~gl~--~~a~~~~~D~Vv~----AIvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      ...+.+.-|+.|---+.  ++.+..+ .-++|    -+--+-|..|...|+.+|.+     |-..++|  +-+|++|.+
T Consensus       162 ~~~~~Dlivlagy~~il~~~~l~~~~-~~iiNiHpSLLP~~rG~~~~~~ai~~G~~~tG~TvH~v~~~--~D~G~Ii~Q  237 (286)
T PRK13011        162 EESGAELVVLARYMQVLSPELCRKLA-GRAINIHHSFLPGFKGAKPYHQAYERGVKLIGATAHYVTDD--LDEGPIIEQ  237 (286)
T ss_pred             HHhCcCEEEEeChhhhCCHHHHhhcc-CCeEEeccccCCCCCCCcHHHHHHHCCCCeEEEEEEEEcCC--CcCCCcEEE
Confidence            43344455666653221  1222221 12343    35667899999999999864     5556654  567888854

>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed

Probab=86.81  E-value=7.1  Score=38.13  Aligned_cols=133  Identities=16%  Similarity=0.160  Sum_probs=80.5

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCC---ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc----cch-HHHHHHh
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHED---KFRVVALAAGSNITLLADQVKRFKPQVVAVRNE----SLL-DEIKEAL  144 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd---~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de----~~~-~~l~~~l  144 (353)
                      -..++||+||+|.+  |++.-.++.....   +++|+++.+++  +.+...+++++-.+..+...    +.+ .++.+.+
T Consensus        86 ~~~~~ri~vl~Sg~--gsnl~al~~~~~~~~~~~~i~~visn~--~~~~~lA~~~gIp~~~~~~~~~~~~~~~~~~~~~l  161 (286)
T PRK06027         86 SAERKRVVILVSKE--DHCLGDLLWRWRSGELPVEIAAVISNH--DDLRSLVERFGIPFHHVPVTKETKAEAEARLLELI  161 (286)
T ss_pred             cccCcEEEEEEcCC--CCCHHHHHHHHHcCCCCcEEEEEEEcC--hhHHHHHHHhCCCEEEeccCccccchhHHHHHHHH
Confidence            34678999999988  9999999865433   68999998765  23444588888777664321    111 2333444


Q ss_pred             hcCCCCcEEEecHHHHH--HHhcCCCCcEEEE----eccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          145 ANVEEKPEILAGEQGVI--EAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       145 ~~~~~~~~v~~G~~gl~--~~a~~~~~D~Vv~----AIvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      ...+.+.-|+.|---+.  ++.+..+ .-++|    -+.-+-|..|...|+.+|.+     |=..+.|  +-.|++|.+
T Consensus       162 ~~~~~Dlivlagy~~il~~~~l~~~~-~~iiNiHpSLLP~yrG~~~~~~ai~~G~~~tG~TiH~v~~~--~D~G~Ii~Q  237 (286)
T PRK06027        162 DEYQPDLVVLARYMQILSPDFVARFP-GRIINIHHSFLPAFKGAKPYHQAYERGVKLIGATAHYVTAD--LDEGPIIEQ  237 (286)
T ss_pred             HHhCCCEEEEecchhhcCHHHHhhcc-CCceecCcccCCCCCCCCHHHHHHHCCCCeEEEEEEEEcCC--CcCCCcEEE
Confidence            44344555666643222  1222221 12333    24457788999999999874     4445544  467888844

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=86.74  E-value=8  Score=35.37  Aligned_cols=95  Identities=20%  Similarity=0.238  Sum_probs=56.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEeCc-cchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~de-~~~~~l~~~l~~~~~~~~v  153 (353)
                      ..+|.|.| +|++|..++++.+..  .++ |++.+ + +-+.+. .++++..+.+.-.++ +...               
T Consensus       130 ~~~vlI~g-~g~vg~~~~~la~~~--g~~~v~~~~-~-~~~~~~-~~~~~g~~~~~~~~~~~~~~---------------  188 (312)
T cd08269         130 GKTVAVIG-AGFIGLLFLQLAAAA--GARRVIAID-R-RPARLA-LARELGATEVVTDDSEAIVE---------------  188 (312)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc--CCcEEEEEC-C-CHHHHH-HHHHhCCceEecCCCcCHHH---------------
Confidence            35799997 689999999999987  566 65543 2 333333 566676654442211 1112               


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                           .+.++.....+|.+++.+.+-..+...+..++.+-++.
T Consensus       189 -----~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~  226 (312)
T cd08269         189 -----RVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLV  226 (312)
T ss_pred             -----HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEE
Confidence                 22333333468999998655455666666666554433

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=86.73  E-value=11  Score=35.44  Aligned_cols=94  Identities=14%  Similarity=0.188  Sum_probs=56.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.| +|++|..++.+.+..  .++|++.+..   +.-.+.++++..+.+.-..+..   +.              
T Consensus       160 g~~vLI~g-~g~vG~~a~~lA~~~--g~~v~~~~~s---~~~~~~~~~~g~~~v~~~~~~~---~~--------------  216 (337)
T cd08261         160 GDTVLVVG-AGPIGLGVIQVAKAR--GARVIVVDID---DERLEFARELGADDTINVGDED---VA--------------  216 (337)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc--CCeEEEECCC---HHHHHHHHHhCCCEEecCcccC---HH--------------
Confidence            35789997 589999999999986  5788877543   2233455677766654322111   11              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                        +.+.+......+|++++.+.|-..+...+..++.+-+
T Consensus       217 --~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~  253 (337)
T cd08261         217 --ARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGR  253 (337)
T ss_pred             --HHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCE
Confidence              1223333333578888886554556666666655433

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=86.70  E-value=1.3  Score=40.70  Aligned_cols=41  Identities=17%  Similarity=0.350  Sum_probs=28.3

Q ss_pred             EEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           81 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        81 ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      |-||||++|...|+-+-+.++..+|.+|.=.+|.+...+.+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl   41 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERL   41 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhh
Confidence            57999999999998777766533999998777764443333

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=86.60  E-value=5  Score=38.87  Aligned_cols=94  Identities=15%  Similarity=0.137  Sum_probs=58.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|.|+ |.||..+..+.+..  .. +|++..  ++-+++ +.++++..+.+.-.++.   .+.              
T Consensus       193 ~~VlV~G~-G~vG~~a~~lak~~--G~~~Vi~~~--~~~~r~-~~a~~~Ga~~~i~~~~~---~~~--------------  249 (371)
T cd08281         193 QSVAVVGL-GGVGLSALLGAVAA--GASQVVAVD--LNEDKL-ALARELGATATVNAGDP---NAV--------------  249 (371)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCcEEEEc--CCHHHH-HHHHHcCCceEeCCCch---hHH--------------
Confidence            57999995 99999999999876  45 466654  343443 35677877665432211   111              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                        +.+.++... .+|+|+++..+-..+.-.+.+++.|=++.
T Consensus       250 --~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv  287 (371)
T cd08281         250 --EQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTV  287 (371)
T ss_pred             --HHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEE
Confidence              112222222 58999998755567777777777765543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK07791 short chain dehydrogenase; Provisional

Probab=86.57  E-value=7.2  Score=36.55  Aligned_cols=32  Identities=28%  Similarity=0.293  Sum_probs=26.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|.+.|.|+++.||..+..-+.+.  ..+|+.+.
T Consensus         6 ~k~~lITGas~GIG~aia~~la~~--G~~vii~~   37 (286)
T PRK07791          6 GRVVIVTGAGGGIGRAHALAFAAE--GARVVVND   37 (286)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEee
Confidence            368999999999999999888875  46676654

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=86.54  E-value=7.6  Score=35.57  Aligned_cols=44  Identities=23%  Similarity=0.349  Sum_probs=32.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      |+|+|.|. |.+|..+..-+.++  ..+|++  ...|.+.+.+...+|.
T Consensus        29 k~v~I~G~-G~vG~~~A~~L~~~--G~~Vvv--~D~~~~~~~~~~~~~g   72 (200)
T cd01075          29 KTVAVQGL-GKVGYKLAEHLLEE--GAKLIV--ADINEEAVARAAELFG   72 (200)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCEEEE--EcCCHHHHHHHHHHcC
Confidence            67999999 79999999988876  578883  4566666655555443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=86.49  E-value=9.8  Score=35.64  Aligned_cols=100  Identities=9%  Similarity=0.090  Sum_probs=58.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC-HHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN-ITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN-v~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      ..++|.|.|++|++|..++.+.+..  ..+|++.+.... .+.-.+.++++..+.+.-.++.....+.            
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------------  211 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLL--GIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLAT------------  211 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHc--CCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHH------------
Confidence            3468999999999999999999987  577887765332 1122344466777665533221000111            


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                          +.+...... .+|.|++...| ..+...+..++.+-+
T Consensus       212 ----~~i~~~~~~-~~d~vld~~g~-~~~~~~~~~l~~~G~  246 (341)
T cd08290         212 ----ELLKSAPGG-RPKLALNCVGG-KSATELARLLSPGGT  246 (341)
T ss_pred             ----HHHHHHcCC-CceEEEECcCc-HhHHHHHHHhCCCCE
Confidence                112222222 58899987555 445556666654433

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=86.48  E-value=1  Score=41.20  Aligned_cols=32  Identities=25%  Similarity=0.288  Sum_probs=27.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +|.|.|+||+||+...+-+.+.  .++|+++.-.
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~   33 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRL   33 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCC
Confidence            4999999999999999988876  6888888743

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=86.26  E-value=10  Score=35.58  Aligned_cols=97  Identities=19%  Similarity=0.203  Sum_probs=57.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|+ |++|..++++.+.... -.|+++.  ++-++ .+.++++..+.+.-..+..   +.+             
T Consensus       168 ~~~VlI~g~-g~vg~~~iqlak~~g~-~~v~~~~--~~~~~-~~~~~~~g~~~vi~~~~~~---~~~-------------  226 (347)
T cd05278         168 GSTVAVIGA-GPVGLCAVAGARLLGA-ARIIAVD--SNPER-LDLAKEAGATDIINPKNGD---IVE-------------  226 (347)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC-CEEEEEe--CCHHH-HHHHHHhCCcEEEcCCcch---HHH-------------
Confidence            357888765 9999999999997631 1455652  33333 3455666644443222111   111             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                         .+.+......+|++++++.|-..+...+.+++.+-++.
T Consensus       227 ---~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v  264 (347)
T cd05278         227 ---QILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIA  264 (347)
T ss_pred             ---HHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEE
Confidence               12222233468999998666467788888887766554

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>TIGR00655 PurU formyltetrahydrofolate deformylase

Probab=86.25  E-value=6.8  Score=38.28  Aligned_cols=132  Identities=16%  Similarity=0.165  Sum_probs=80.0

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCC---ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCcc-----chHHHHHHhh
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHED---KFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-----LLDEIKEALA  145 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd---~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~-----~~~~l~~~l~  145 (353)
                      +.++||+||.|.+  |++.-+++.+..+   +.+|+++.+++  +.+...+++++-.+..+....     .-.++-+.+.
T Consensus        82 ~~~~ki~vl~Sg~--g~nl~~l~~~~~~g~l~~~i~~visn~--~~~~~~A~~~gIp~~~~~~~~~~~~~~e~~~~~~l~  157 (280)
T TIGR00655        82 DKLKRVAILVSKE--DHCLGDLLWRWYSGELDAEIALVISNH--EDLRSLVERFGIPFHYIPATKDNRVEHEKRQLELLK  157 (280)
T ss_pred             CCCcEEEEEEcCC--ChhHHHHHHHHHcCCCCcEEEEEEEcC--hhHHHHHHHhCCCEEEcCCCCcchhhhHHHHHHHHH
Confidence            4578999999988  9999999987543   46888887654  344556888887777664311     1122333333


Q ss_pred             cCCCCcEEEecHHHHH--HHhcCCCCcEEEE----eccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          146 NVEEKPEILAGEQGVI--EAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       146 ~~~~~~~v~~G~~gl~--~~a~~~~~D~Vv~----AIvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      ..+.+.-++.|---+.  ++.+..+. -++|    -+.-+-|..|...|+++|.+     +=..|.|  +-.|++|.+
T Consensus       158 ~~~~Dlivlagym~il~~~~l~~~~~-~iINiHpSLLP~f~G~~p~~~ai~~G~k~tG~TvH~V~e~--lD~GpII~Q  232 (280)
T TIGR00655       158 QYQVDLVVLAKYMQILSPDFVKRYPN-KIINIHHSFLPAFIGANPYQRAYERGVKIIGATAHYVTEE--LDEGPIIEQ  232 (280)
T ss_pred             HhCCCEEEEeCchhhCCHHHHhhccC-CEEEecCCcCCCCCCcCHHHHHHHcCCCeEEEEEEEEcCC--CcCCCeEEE
Confidence            3333444555542211  11222211 2333    23557899999999999964     4556655  467888854

This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=86.25  E-value=8.3  Score=37.54  Aligned_cols=110  Identities=15%  Similarity=0.179  Sum_probs=62.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCcc-chHHHHHHhhcCCCCc----
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKP----  151 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~-~~~~l~~~l~~~~~~~----  151 (353)
                      .+|.|.|++|+||..++.+.+..  .+++++.+  ++-+++ ++++++..+.+.-.++. .+..... + +.+...    
T Consensus       195 ~~vlV~ga~g~iG~a~~~lak~~--G~~vv~~~--~s~~~~-~~~~~~G~~~~i~~~~~~~~~~~~~-~-~~~~~~~~~~  267 (393)
T cd08246         195 DNVLIWGASGGLGSMAIQLARAA--GANPVAVV--SSEEKA-EYCRALGAEGVINRRDFDHWGVLPD-V-NSEAYTAWTK  267 (393)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHc--CCeEEEEe--CCHHHH-HHHHHcCCCEEEccccccccccccc-c-cchhhhhhhh
Confidence            58999999999999999999887  56777654  333443 46677887665533211 0000000 0 000000    


Q ss_pred             EEEecHHHHHHHhcCC-CCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          152 EILAGEQGVIEAARHP-DAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~-~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                      ....-.+.+.++.... .+|+|++.. |...+...+..++.+=+
T Consensus       268 ~~~~~~~~v~~l~~~~~g~d~vid~~-g~~~~~~~~~~l~~~G~  310 (393)
T cd08246         268 EARRFGKAIWDILGGREDPDIVFEHP-GRATFPTSVFVCDRGGM  310 (393)
T ss_pred             ccchHHHHHHHHhCCCCCCeEEEECC-chHhHHHHHHHhccCCE
Confidence            0000123455555444 699999984 44667777776665443

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=86.22  E-value=4.5  Score=39.75  Aligned_cols=143  Identities=15%  Similarity=0.150  Sum_probs=86.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhC-CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEH-EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~-pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +||+|+|. |.||+...+-+.+- .+.|+++++ ..++.++-.+.+..  ++                         ++ 
T Consensus         3 ~rvgiIG~-GaIG~~va~~l~~~~~~~~~l~~V-~~~~~~~~~~~~~~--~~-------------------------~~-   52 (267)
T PRK13301          3 HRIAFIGL-GAIASDVAAGLLADAAQPCQLAAL-TRNAADLPPALAGR--VA-------------------------LL-   52 (267)
T ss_pred             eEEEEECc-cHHHHHHHHHHhcCCCCceEEEEE-ecCCHHHHHHhhcc--Cc-------------------------cc-
Confidence            58999997 99999999877753 456999998 55555444333322  21                         11 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeee------cccceeecccchhHHhhhcCCeEeecCCchh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA------NKETLIAGGPFVLPLAHKHNIKILPADSEHS  229 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA------NKESLV~aG~li~~~a~~~~~~IlPVDSEHs  229 (353)
                        +.+.+++. .++|+||.+-+=.+=-+-....|++|+++.+.      +++..    .-+.+.|++++.+++--   .-
T Consensus        53 --~~l~~ll~-~~~DlVVE~A~~~av~e~~~~iL~~g~dlvv~SvGALaD~~~~----~~l~~~A~~~g~~i~ip---SG  122 (267)
T PRK13301         53 --DGLPGLLA-WRPDLVVEAAGQQAIAEHAEGCLTAGLDMIICSAGALADDALR----ARLIAAAEAGGARIRVP---AG  122 (267)
T ss_pred             --CCHHHHhh-cCCCEEEECCCHHHHHHHHHHHHhcCCCEEEEChhHhcCHHHH----HHHHHHHHhCCCEEEEe---Ch
Confidence              12344432 35888888754444444456677788887543      22211    12456778888777642   35


Q ss_pred             HHH--HhhcCCCCCCcceEEEEecCCc--CCCCC
Q 018600          230 AIF--QCIQGLPEGALRRIILTASGGA--FRDWP  259 (353)
Q Consensus       230 AIf--Q~L~g~~~~~v~kIiLTASGGP--Fr~~~  259 (353)
                      ||+  +.|+--....++++.+|.--.|  |++-+
T Consensus       123 AigGlD~l~aa~~~~~~~v~~~t~K~P~sl~g~~  156 (267)
T PRK13301        123 AIAGLDYLQAVAGRDDAEVVYESRKPVAAWRAEL  156 (267)
T ss_pred             HHHhHHHHHHhhccCceEEEEEEecChhHhccCh
Confidence            653  5555444456788888876666  44444

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=86.00  E-value=7.9  Score=38.79  Aligned_cols=135  Identities=14%  Similarity=0.214  Sum_probs=72.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccch--HHHHHHhhcCCCCc-
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLL--DEIKEALANVEEKP-  151 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~--~~l~~~l~~~~~~~-  151 (353)
                      ..++|+|+|++|.+|.+.-..+++.  .++|.+... +..+.+.+.+.  +.++|+++-+...  +.+++ +.....++ 
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~--G~~V~~~d~-~~~~~~~~~~~--~aDlVilavP~~~~~~~~~~-l~~l~~~~i  170 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLS--GYQVRILEQ-DDWDRAEDILA--DAGMVIVSVPIHLTEEVIAR-LPPLPEDCI  170 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHC--CCeEEEeCC-CcchhHHHHHh--cCCEEEEeCcHHHHHHHHHH-HhCCCCCcE
Confidence            3478999999999999999999886  366666542 22233333333  4688887654332  22333 22222121 


Q ss_pred             EEEecH--HH-HHHHhcCCCCcEE-EEeccCccCcHHHHHHHHcCCcEeeecccceeecc------cchhHHhhhcCCeE
Q 018600          152 EILAGE--QG-VIEAARHPDAVTV-VTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG------PFVLPLAHKHNIKI  221 (353)
Q Consensus       152 ~v~~G~--~g-l~~~a~~~~~D~V-v~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG------~li~~~a~~~~~~I  221 (353)
                      -+-.|.  .. +.++.+.....+| .-=+.|.     ..        =.++++-.+++.|      ..+.++.+..|.++
T Consensus       171 v~Dv~SvK~~~~~~~~~~~~~~fvg~HPm~G~-----~~--------~~~~~~~vv~~~~~~~~~~~~~~~l~~~lG~~v  237 (374)
T PRK11199        171 LVDLTSVKNAPLQAMLAAHSGPVLGLHPMFGP-----DV--------GSLAKQVVVVCDGRQPEAYQWLLEQIQVWGARL  237 (374)
T ss_pred             EEECCCccHHHHHHHHHhCCCCEEeeCCCCCC-----CC--------cccCCCEEEEcCCCCchHHHHHHHHHHHCCCEE
Confidence            111122  22 3334433222222 1112221     00        0234444555555      35678888899999


Q ss_pred             eecCCch
Q 018600          222 LPADSEH  228 (353)
Q Consensus       222 lPVDSEH  228 (353)
                      +.+|.|.
T Consensus       238 ~~~~~~~  244 (374)
T PRK11199        238 HRISAVE  244 (374)
T ss_pred             EECCHHH
Confidence            9999864

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=85.86  E-value=3.2  Score=42.78  Aligned_cols=83  Identities=24%  Similarity=0.342  Sum_probs=49.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv-~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +++.+-|+||++|.-.+.=.-..++ .+|.+|.=.+|- ..+....+.|.          .+..+++...   ..++++.
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~-~kv~cLVRA~s~E~a~~RL~~~~~----------~~~~~~e~~~---~ri~vv~   66 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSD-AKVICLVRAQSDEAALARLEKTFD----------LYRHWDELSA---DRVEVVA   66 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHHHhh----------hhhhhhhhhc---ceEEEEe
Confidence            4688999999999766554444445 999999977772 23333334443          1223333221   2466666


Q ss_pred             cHHH----------HHHHhcCCCCcEEEEe
Q 018600          156 GEQG----------VIEAARHPDAVTVVTG  175 (353)
Q Consensus       156 G~~g----------l~~~a~~~~~D~Vv~A  175 (353)
                      |+-+          ..++++  .+|+|+-.
T Consensus        67 gDl~e~~lGL~~~~~~~La~--~vD~I~H~   94 (382)
T COG3320          67 GDLAEPDLGLSERTWQELAE--NVDLIIHN   94 (382)
T ss_pred             cccccccCCCCHHHHHHHhh--hcceEEec
Confidence            6643          344553  48888864

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=85.86  E-value=16  Score=34.25  Aligned_cols=96  Identities=17%  Similarity=0.242  Sum_probs=60.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc-cchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de-~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ..+|.|.|++|++|..++++.+..  .++|++++..  -++. +.++++..+.+.-... +...++              
T Consensus       166 ~~~vlV~g~~~~vg~~~~~~a~~~--g~~v~~~~~~--~~~~-~~~~~~g~~~v~~~~~~~~~~~~--------------  226 (341)
T cd08297         166 GDWVVISGAGGGLGHLGVQYAKAM--GLRVIAIDVG--DEKL-ELAKELGADAFVDFKKSDDVEAV--------------  226 (341)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCC--HHHH-HHHHHcCCcEEEcCCCccHHHHH--------------
Confidence            368999999999999999999987  4677776533  3443 3446777665543221 111222              


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                            .+......+|.++++..+-..+...+.++..+=++.
T Consensus       227 ------~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v  262 (341)
T cd08297         227 ------KELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLV  262 (341)
T ss_pred             ------HHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEE
Confidence                  222222357888886666667777777776554443

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=85.83  E-value=6.2  Score=36.72  Aligned_cols=89  Identities=18%  Similarity=0.273  Sum_probs=59.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|+|++|++|..++.+.+..  ..+|++++  +     .+.+++|..+.+.-.+ +    .               
T Consensus       163 g~~vlI~g~~g~vg~~~~~~a~~~--G~~v~~~~--~-----~~~~~~~g~~~~~~~~-~----~---------------  213 (325)
T cd08264         163 GETVVVFGASGNTGIFAVQLAKMM--GAEVIAVS--R-----KDWLKEFGADEVVDYD-E----V---------------  213 (325)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHc--CCeEEEEe--H-----HHHHHHhCCCeeecch-H----H---------------
Confidence            368999999999999999999987  45677765  1     1445667665443211 0    1               


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                       .+.+.++.  ..+|+|+++..+ ..+...+.+++.+-++..
T Consensus       214 -~~~l~~~~--~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~  251 (325)
T cd08264         214 -EEKVKEIT--KMADVVINSLGS-SFWDLSLSVLGRGGRLVT  251 (325)
T ss_pred             -HHHHHHHh--CCCCEEEECCCH-HHHHHHHHhhccCCEEEE
Confidence             12233333  468999998655 677888888877666554

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>PRK10124 putative UDP-glucose lipid carrier transferase; Provisional

Probab=85.83  E-value=6  Score=40.82  Aligned_cols=81  Identities=19%  Similarity=0.179  Sum_probs=57.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEee-----------cCCHHHHHHHHHhhCCCEEEEeCccch-HHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALAA-----------GSNITLLADQVKRFKPQVVAVRNESLL-DEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLaa-----------gsNv~lL~~Q~~eFkPk~V~i~de~~~-~~l~~  142 (353)
                      .+++.|+|+ |+-|.+..+-++++|+ .|+++|..-           -.|.+.|.+.+++.+.+.|.++-+... +++++
T Consensus       143 ~rrVLIvGa-G~~g~~l~~~L~~~~~~g~~vVGfiDdd~~~g~~VpvlG~~~dL~~~v~~~~IdeViIAip~~~~~~l~e  221 (463)
T PRK10124        143 KRMVAVAGD-LPAGQMLLESFRNEPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMSMCDGARVKK  221 (463)
T ss_pred             CCcEEEEEC-CHHHHHHHHHHhcCccCCeEEEEEEeCCccccCCCCcCCCHHHHHHHHHhCCCCEEEEeCCCcchHHHHH
Confidence            467999984 7889999999988875 799999763           357788999999999999999865432 23333


Q ss_pred             ---HhhcCCCCcEEEecH
Q 018600          143 ---ALANVEEKPEILAGE  157 (353)
Q Consensus       143 ---~l~~~~~~~~v~~G~  157 (353)
                         .+...+.++.++.+-
T Consensus       222 ll~~~~~~~v~V~ivP~l  239 (463)
T PRK10124        222 LVRQLADTTCSVLLIPDV  239 (463)
T ss_pred             HHHHHHHcCCeEEEecch
Confidence               333333344444443

>PLN02780 ketoreductase/ oxidoreductase

Probab=85.81  E-value=5.9  Score=38.30  Aligned_cols=44  Identities=23%  Similarity=0.175  Sum_probs=33.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      +.+.|.|+||-||.....-+.+.  .++|+.+  .+|-+.|.+.+++.
T Consensus        54 ~~~lITGAs~GIG~alA~~La~~--G~~Vil~--~R~~~~l~~~~~~l   97 (320)
T PLN02780         54 SWALVTGPTDGIGKGFAFQLARK--GLNLVLV--ARNPDKLKDVSDSI   97 (320)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCCEEEE--ECCHHHHHHHHHHH
Confidence            67999999999999999888875  5677664  35777776655543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=85.78  E-value=1  Score=41.62  Aligned_cols=32  Identities=25%  Similarity=0.378  Sum_probs=27.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ++|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r   32 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVR   32 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHC--CCEEEEEEe
Confidence            36999999999999999998876  478888764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=85.73  E-value=10  Score=35.80  Aligned_cols=97  Identities=12%  Similarity=0.126  Sum_probs=59.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .++|.|.| .|++|..++.+.+...  . +|++.  .++-+.+ +.++++..+.+.-.++..   +.             
T Consensus       164 g~~vlV~~-~g~vg~~~~~la~~~G--~~~v~~~--~~~~~~~-~~~~~lg~~~~~~~~~~~---~~-------------  221 (341)
T PRK05396        164 GEDVLITG-AGPIGIMAAAVAKHVG--ARHVVIT--DVNEYRL-ELARKMGATRAVNVAKED---LR-------------  221 (341)
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHcC--CCEEEEE--cCCHHHH-HHHHHhCCcEEecCcccc---HH-------------
Confidence            35788876 5999999999998763  4 35444  3343443 456677776654322211   11             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                         +.+.++.....+|.|+++..+-..+...+.+++.+-++.+
T Consensus       222 ---~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~  261 (341)
T PRK05396        222 ---DVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAM  261 (341)
T ss_pred             ---HHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEE
Confidence               1122233334689999976666677888888877665543

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=85.70  E-value=8.8  Score=35.58  Aligned_cols=94  Identities=17%  Similarity=0.187  Sum_probs=56.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh-hCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR-FKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e-FkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|.|++|++|..+..+.++.  .++|++++  ++-+.+. .+++ +..+.+.-.++.   .+.              
T Consensus       147 ~~vlI~g~~g~ig~~~~~~a~~~--G~~vi~~~--~~~~~~~-~~~~~~g~~~~~~~~~~---~~~--------------  204 (329)
T cd05288         147 ETVVVSAAAGAVGSVVGQIAKLL--GARVVGIA--GSDEKCR-WLVEELGFDAAINYKTP---DLA--------------  204 (329)
T ss_pred             CEEEEecCcchHHHHHHHHHHHc--CCEEEEEe--CCHHHHH-HHHhhcCCceEEecCCh---hHH--------------
Confidence            68999999999999999999986  46777765  3333332 3333 555443322111   111              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                        +.+.+... ..+|++++...| ..+...+..++.+-++.
T Consensus       205 --~~v~~~~~-~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v  241 (329)
T cd05288         205 --EALKEAAP-DGIDVYFDNVGG-EILDAALTLLNKGGRIA  241 (329)
T ss_pred             --HHHHHhcc-CCceEEEEcchH-HHHHHHHHhcCCCceEE
Confidence              12223332 358899886544 56666677776554443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=85.65  E-value=6.1  Score=35.05  Aligned_cols=41  Identities=20%  Similarity=0.225  Sum_probs=29.2

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      |.|.|+||.||..+..-+.+.  .++|+.+ +.++.+.+.+..+
T Consensus         1 vlItGas~giG~~~a~~l~~~--G~~v~~~-~~~~~~~~~~~~~   41 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAAD--GFEICVH-YHSGRSDAESVVS   41 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHC--CCEEEEE-eCCCHHHHHHHHH
Confidence            579999999999999999876  5676544 4555554444433

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=85.61  E-value=8.7  Score=36.04  Aligned_cols=96  Identities=17%  Similarity=0.152  Sum_probs=58.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ..+|.|.| .|++|..++.+.+..  ..+ |++.+..  -++. +.++++..+.+.-.++..   +              
T Consensus       166 g~~VlV~g-~g~vg~~~~~la~~~--g~~~v~~~~~s--~~~~-~~~~~~g~~~~~~~~~~~---~--------------  222 (343)
T cd08235         166 GDTVLVIG-AGPIGLLHAMLAKAS--GARKVIVSDLN--EFRL-EFAKKLGADYTIDAAEED---L--------------  222 (343)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc--CCcEEEEECCC--HHHH-HHHHHhCCcEEecCCccC---H--------------
Confidence            46899997 589999999988876  355 5554332  2222 233567766544322211   1              


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                        .+.+.++.....+|+|++.+.|-..+...+.+++.+-++.
T Consensus       223 --~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v  262 (343)
T cd08235         223 --VEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRIL  262 (343)
T ss_pred             --HHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence              1122333333458999998776667777788887665543

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK06125 short chain dehydrogenase; Provisional

Probab=85.54  E-value=4.8  Score=36.48  Aligned_cols=45  Identities=16%  Similarity=0.240  Sum_probs=34.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+...+.+.  .++|+++.  +|-+.+.+...+.
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l   51 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAE--GCHLHLVA--RDADALEALAADL   51 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHH
Confidence            378999999999999999999875  56777764  5566666555443

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=85.08  E-value=11  Score=34.98  Aligned_cols=92  Identities=9%  Similarity=0.074  Sum_probs=54.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..++.|.|++|.+|..++.+.+..  ..+|++.+  ++-+++ +.++++..+.+.-.++...                  
T Consensus       141 g~~vlI~g~~g~ig~~~~~lak~~--G~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~------------------  197 (327)
T PRK10754        141 DEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTV--GSAQKA-QRAKKAGAWQVINYREENI------------------  197 (327)
T ss_pred             CCEEEEEeCCcHHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHHCCCCEEEcCCCCcH------------------
Confidence            368999999999999999999987  45677654  233333 3346676655543222111                  


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                       .+.+.++.....+|++++.+.| ..+...+..++.+
T Consensus       198 -~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~  232 (327)
T PRK10754        198 -VERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR  232 (327)
T ss_pred             -HHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC
Confidence             1122333333357888887554 4455555555443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=85.02  E-value=8.7  Score=34.27  Aligned_cols=33  Identities=21%  Similarity=0.250  Sum_probs=27.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .|++.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~   40 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQ   40 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEec
Confidence            368999999999999999988764  578887753

>PRK07856 short chain dehydrogenase; Provisional

Probab=84.98  E-value=7.4  Score=35.09  Aligned_cols=32  Identities=22%  Similarity=0.200  Sum_probs=26.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~   37 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAA--GATVVVCG   37 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe
Confidence            478999999999999999998875  56776653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=84.94  E-value=8  Score=35.25  Aligned_cols=31  Identities=23%  Similarity=0.184  Sum_probs=25.2

Q ss_pred             CeeEEEEecCC--hHhHHHHHHHHhCCCceEEEEE
Q 018600           76 PKPISVLGSTG--SIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        76 ~k~I~ILGSTG--SIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      .|++.|.|+||  +||..+..-+.++  .++|+..
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~   38 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEA--GADIFFT   38 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEE
Confidence            36899999995  8999999988876  4667664

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=84.88  E-value=10  Score=37.27  Aligned_cols=114  Identities=16%  Similarity=0.139  Sum_probs=65.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccch-HHHHHHhhc-CCCC-cE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLL-DEIKEALAN-VEEK-PE  152 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~-~~l~~~l~~-~~~~-~~  152 (353)
                      ..++.|.|++|.||..++.+.+.+  ..+++.++  ++-++ .+.++++..+.+.-.++... ..+.+.... .... .+
T Consensus       190 g~~vlV~Ga~g~vG~~ai~~ak~~--G~~vi~~~--~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  264 (398)
T TIGR01751       190 GDNVLIWGAAGGLGSYATQLARAG--GGNPVAVV--SSPEK-AEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKS  264 (398)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHc--CCeEEEEc--CCHHH-HHHHHHcCCCEEecCCCcchhhccccccccccchhhhc
Confidence            368999999999999999999977  46677665  33344 35667788777653322110 001100000 0000 00


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                      ...-.+.+.++.....+|+|++.. |...+..++.+++.+=++
T Consensus       265 ~~~~~~~~~~~~~~~g~d~vld~~-g~~~~~~~~~~l~~~G~~  306 (398)
T TIGR01751       265 FKRFGKRIRELTGGEDPDIVFEHP-GRATFPTSVFVCRRGGMV  306 (398)
T ss_pred             chhHHHHHHHHcCCCCceEEEECC-cHHHHHHHHHhhccCCEE
Confidence            011123445554445699999985 446677778877765443

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=84.76  E-value=11  Score=34.07  Aligned_cols=32  Identities=19%  Similarity=0.173  Sum_probs=25.9

Q ss_pred             CeeEEEEecCC--hHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTG--SIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTG--SIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|++.|.|+||  .||.+...-+.+.  .++|+.+.
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~   38 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTY   38 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEc
Confidence            36799999996  6999999888876  57887764

>TIGR03025 EPS_sugtrans exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase

Probab=84.72  E-value=8.4  Score=38.86  Aligned_cols=61  Identities=15%  Similarity=0.287  Sum_probs=48.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEeecC--------------CHHHHHHHHHhhCCCEEEEeCccc
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALAAGS--------------NITLLADQVKRFKPQVVAVRNESL  136 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLaags--------------Nv~lL~~Q~~eFkPk~V~i~de~~  136 (353)
                      ..+++.|+|+ |.-|.+.++-++++|+ .|+++|..-..              +.+.+.+.+++.+.+.|.++.+..
T Consensus       124 ~~~rvLIvGa-g~~a~~l~~~L~~~~~~g~~vvG~idd~~~~~~~i~g~pVlg~~~~l~~~i~~~~id~ViIa~p~~  199 (445)
T TIGR03025       124 NLRRVLIVGT-GEAARELAAALSRNPDLGYRVVGFVDDRPSDRVEVAGLPVLGKLDDLVELVRAHRVDEVIIALPLS  199 (445)
T ss_pred             CCCcEEEEEC-CHHHHHHHHHHhhCccCCeEEEEEEeCCcccccccCCCcccCCHHHHHHHHHhCCCCEEEEecCcc
Confidence            3478999996 7788899988887765 69999975322              567899999999999999876543

Certain closely related transferase enzymes such as Sinorhizobium ExoY and Lactococcus EpsD lack the N-terminal domain and are not found by this model.

>PRK08303 short chain dehydrogenase; Provisional

Probab=84.69  E-value=11  Score=36.24  Aligned_cols=32  Identities=19%  Similarity=0.059  Sum_probs=26.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|.+.|.|+|+.||..+..-+.+.  .++|+.+.
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~   39 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAA--GATVYVTG   39 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe
Confidence            378999999999999999998874  57777653

>PLN02686 cinnamoyl-CoA reductase

Probab=84.64  E-value=5.4  Score=39.19  Aligned_cols=33  Identities=18%  Similarity=0.320  Sum_probs=28.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .+|+|.|.|+||+||....+-+.+.  .++|++++
T Consensus        52 ~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~   84 (367)
T PLN02686         52 EARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAV   84 (367)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEe
Confidence            3578999999999999999988765  68888765

>PRK08324 short chain dehydrogenase; Validated

Probab=84.62  E-value=7.8  Score=41.54  Aligned_cols=45  Identities=22%  Similarity=0.182  Sum_probs=34.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      |++.|.|+||.||..+...+.+.  .++|+.+.  +|-+.+.+...++.
T Consensus       423 k~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~--r~~~~~~~~~~~l~  467 (681)
T PRK08324        423 KVALVTGAAGGIGKATAKRLAAE--GACVVLAD--LDEEAAEAAAAELG  467 (681)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC--cCEEEEEe--CCHHHHHHHHHHHh
Confidence            68999999999999999999876  46777654  55566665555554

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=84.59  E-value=11  Score=35.70  Aligned_cols=98  Identities=15%  Similarity=0.135  Sum_probs=55.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ..+|.|.| .|++|..++.+.+...  .+ |++.+.  +-++ .++++++..+.+.-.++....++.+            
T Consensus       163 g~~vlI~g-~g~vG~~a~~lak~~G--~~~v~~~~~--~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~------------  224 (343)
T cd05285         163 GDTVLVFG-AGPIGLLTAAVAKAFG--ATKVVVTDI--DPSR-LEFAKELGATHTVNVRTEDTPESAE------------  224 (343)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcC--CcEEEEECC--CHHH-HHHHHHcCCcEEeccccccchhHHH------------
Confidence            35788876 5899999999999864  44 444432  2222 3455666666554332221111111            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                          .+.+......+|+|++...+-..+...+..+..+-++
T Consensus       225 ----~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~  261 (343)
T cd05285         225 ----KIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTV  261 (343)
T ss_pred             ----HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEE
Confidence                1222223335899999855444666677777665443

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=84.45  E-value=2.7  Score=40.12  Aligned_cols=36  Identities=19%  Similarity=0.279  Sum_probs=29.3

Q ss_pred             EEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH
Q 018600           80 SVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT  115 (353)
Q Consensus        80 ~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~  115 (353)
                      .|.|+||++|...++-+-++.+.++|.++.-..+..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~   36 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPK   36 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccc
Confidence            378999999999999999887778888877554433

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=84.28  E-value=12  Score=35.64  Aligned_cols=93  Identities=11%  Similarity=0.138  Sum_probs=56.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEeCcc-chHHHHHHhhcCCCCcEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~-~~~~l~~~l~~~~~~~~v~  154 (353)
                      .+|.| +++|++|..++.+.+..-  .. +++.  .++-+++ +.++++..+.+.-.++. ...+               
T Consensus       176 ~~vlI-~g~g~vG~~~~~~a~~~G--~~~v~~~--~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~---------------  234 (350)
T cd08256         176 DVVVL-AGAGPLGLGMIGAARLKN--PKKLIVL--DLKDERL-ALARKFGADVVLNPPEVDVVEK---------------  234 (350)
T ss_pred             CEEEE-ECCCHHHHHHHHHHHHcC--CcEEEEE--cCCHHHH-HHHHHcCCcEEecCCCcCHHHH---------------
Confidence            46777 667999999999998863  33 3332  3444544 46677776654322211 1122               


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                           +.++.....+|++++.+.|-..+...+.+++.+-++
T Consensus       235 -----~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~  270 (350)
T cd08256         235 -----IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRF  270 (350)
T ss_pred             -----HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEE
Confidence                 222333335899999876556677788888776543

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=84.20  E-value=14  Score=34.67  Aligned_cols=97  Identities=21%  Similarity=0.231  Sum_probs=58.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.| +|++|..++++.+..  .++|+.....++-+++ +.++++..+.+ -..+..+   .              
T Consensus       165 g~~vlI~g-~g~~g~~~~~la~~~--G~~v~~~~~~~~~~~~-~~~~~~g~~~~-~~~~~~~---~--------------  222 (306)
T cd08258         165 GDTVVVFG-PGPIGLLAAQVAKLQ--GATVVVVGTEKDEVRL-DVAKELGADAV-NGGEEDL---A--------------  222 (306)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc--CCEEEEECCCCCHHHH-HHHHHhCCccc-CCCcCCH---H--------------
Confidence            45788855 799999999999987  4677665445554444 45566665433 1111111   1              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                        +.+.++....++|.+++.+.+-..+...+..++.+-++.
T Consensus       223 --~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v  261 (306)
T cd08258         223 --ELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIV  261 (306)
T ss_pred             --HHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEE
Confidence              112222333458999998655566777777776655544

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=83.99  E-value=11  Score=36.55  Aligned_cols=91  Identities=15%  Similarity=0.213  Sum_probs=58.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .++.|.| +|+||..++.+.+..  ..+|++++  ++-+++.+..+++..+.+....+  ...+                
T Consensus       182 ~~vlV~G-~G~vG~~av~~Ak~~--G~~vi~~~--~~~~~~~~~~~~~Ga~~~i~~~~--~~~~----------------  238 (357)
T PLN02514        182 LRGGILG-LGGVGHMGVKIAKAM--GHHVTVIS--SSDKKREEALEHLGADDYLVSSD--AAEM----------------  238 (357)
T ss_pred             CeEEEEc-ccHHHHHHHHHHHHC--CCeEEEEe--CCHHHHHHHHHhcCCcEEecCCC--hHHH----------------
Confidence            5788997 599999999999987  46677655  34455555667787765433211  1111                


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                          .+..  ..+|+|++++.+...+...+.+++.|-++.
T Consensus       239 ----~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv  272 (357)
T PLN02514        239 ----QEAA--DSLDYIIDTVPVFHPLEPYLSLLKLDGKLI  272 (357)
T ss_pred             ----HHhc--CCCcEEEECCCchHHHHHHHHHhccCCEEE
Confidence                1111  258999998655567777777777665543

>PRK05472 redox-sensing transcriptional repressor Rex; Provisional

Probab=83.99  E-value=7.1  Score=35.78  Aligned_cols=64  Identities=19%  Similarity=0.254  Sum_probs=44.6

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--------------CHHHHHHHHHhhCCCEEEEeCcc
Q 018600           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--------------NITLLADQVKRFKPQVVAVRNES  135 (353)
Q Consensus        71 ~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--------------Nv~lL~~Q~~eFkPk~V~i~de~  135 (353)
                      -.|+..++|+|+|+ |.+|....+........|+++|+....              ..+.+.+.+++.+++.|.++-+.
T Consensus        79 l~~~~~~rV~IIGa-G~iG~~l~~~~~~~~~g~~ivgv~D~d~~~~~~~i~g~~v~~~~~l~~li~~~~iD~ViIa~P~  156 (213)
T PRK05472         79 LGLDRTWNVALVGA-GNLGRALLNYNGFEKRGFKIVAAFDVDPEKIGTKIGGIPVYHIDELEEVVKENDIEIGILTVPA  156 (213)
T ss_pred             hCCCCCcEEEEECC-CHHHHHHHHhhhcccCCcEEEEEEECChhhcCCEeCCeEEcCHHHHHHHHHHCCCCEEEEeCCc
Confidence            34556678999995 889998887644323469999985321              24567777777788888877554

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=83.97  E-value=1.4  Score=41.10  Aligned_cols=31  Identities=19%  Similarity=0.377  Sum_probs=25.5

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      |.|.|+||+||+...+-+.+.  .++++++.-+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~   32 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDN   32 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhC--CCceEEEecC
Confidence            789999999999999998876  5667776533

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=83.90  E-value=13  Score=33.98  Aligned_cols=49  Identities=14%  Similarity=0.287  Sum_probs=34.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHhhC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      .+||+|+| +|.+|+....-+.++. ..++.+.+..++|-+.+.+..+++.
T Consensus         4 ~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   53 (245)
T PRK07634          4 KHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYN   53 (245)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcC
Confidence            35799999 6999998888776653 3455333445567788877777775

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=83.37  E-value=14  Score=35.74  Aligned_cols=93  Identities=16%  Similarity=0.144  Sum_probs=55.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ++|.|.|+ |++|..++.+.+...  . .|++..  ++-+++ +.++++..+.+.-.+....   .              
T Consensus       188 ~~vlI~g~-g~vG~~~~~la~~~G--~~~v~~~~--~~~~k~-~~~~~~g~~~~i~~~~~~~---~--------------  244 (365)
T cd08278         188 SSIAVFGA-GAVGLAAVMAAKIAG--CTTIIAVD--IVDSRL-ELAKELGATHVINPKEEDL---V--------------  244 (365)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcC--CCeEEEEe--CCHHHH-HHHHHcCCcEEecCCCcCH---H--------------
Confidence            68999975 999999999999873  4 344433  233443 3567777766543322111   1              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                        +.+.++. ...+|.|++++.+-..+...+..++.+-++
T Consensus       245 --~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~  281 (365)
T cd08278         245 --AAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTL  281 (365)
T ss_pred             --HHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEE
Confidence              1222333 346899999864444556666666555443

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=83.22  E-value=10  Score=34.98  Aligned_cols=65  Identities=12%  Similarity=0.056  Sum_probs=40.9

Q ss_pred             eeEEEEec--CChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhhCCCEEEEeCccchHHHHHH
Q 018600           77 KPISVLGS--TGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGS--TGSIGtqTLdVI~~~pd~F~VvaLaa-gsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~  143 (353)
                      |.+.|.|+  |+-||..+..-+.+.  .++|+...- .++.+.+.+..+++....+.-.|-...+.+++.
T Consensus         7 k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   74 (260)
T PRK06997          7 KRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDAL   74 (260)
T ss_pred             cEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHH
Confidence            67999996  567999998888775  466665421 245666766666664433343455444555543

>PRK06940 short chain dehydrogenase; Provisional

Probab=83.17  E-value=13  Score=34.59  Aligned_cols=59  Identities=20%  Similarity=0.199  Sum_probs=33.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCCCEEEE-eCccchHHHHH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~---~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .+.|-|+ |.||..+.+-+.   ..++|+.+.  +|.+.+.+..   ++...+...+ .|-...+.+..
T Consensus         4 ~~lItGa-~gIG~~la~~l~---~G~~Vv~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~   66 (275)
T PRK06940          4 VVVVIGA-GGIGQAIARRVG---AGKKVLLAD--YNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKA   66 (275)
T ss_pred             EEEEECC-ChHHHHHHHHHh---CCCEEEEEe--CCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHH
Confidence            4555565 789999988874   368888764  4555544433   3333343322 34444444443

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=83.12  E-value=13  Score=33.51  Aligned_cols=94  Identities=15%  Similarity=0.203  Sum_probs=54.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++|.+|..+..+.+..  ..+|+..+-..  +. .+.++++..+.+.-.+...   +               
T Consensus       140 ~~~vli~g~~~~~g~~~~~~a~~~--g~~v~~~~~~~--~~-~~~~~~~g~~~~~~~~~~~---~---------------  196 (323)
T cd08241         140 GETVLVLGAAGGVGLAAVQLAKAL--GARVIAAASSE--EK-LALARALGADHVIDYRDPD---L---------------  196 (323)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHh--CCEEEEEeCCH--HH-HHHHHHcCCceeeecCCcc---H---------------
Confidence            368999999999999999999876  45676654332  22 2233445443332211110   1               


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                       .+.+.++.....+|.+++.+.| ..+...+.+++.+-+
T Consensus       197 -~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~  233 (323)
T cd08241         197 -RERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWGGR  233 (323)
T ss_pred             -HHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccCCE
Confidence             1223333333468999987665 666666666655433

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=83.09  E-value=14  Score=35.02  Aligned_cols=91  Identities=15%  Similarity=0.233  Sum_probs=54.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|+| +|++|..+..+.+..  .++|++.+.  +-+.+ +.++++..+.+.-..+..   +.+             
T Consensus       164 ~~~vlV~g-~g~iG~~~~~~a~~~--G~~vi~~~~--~~~~~-~~~~~~g~~~~i~~~~~~---~~~-------------  221 (333)
T cd08296         164 GDLVAVQG-IGGLGHLAVQYAAKM--GFRTVAISR--GSDKA-DLARKLGAHHYIDTSKED---VAE-------------  221 (333)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHC--CCeEEEEeC--ChHHH-HHHHHcCCcEEecCCCcc---HHH-------------
Confidence            35899999 899999999999986  466766543  44443 344778776654322211   111             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                         .+.+.   ..+|.++++..+-..+...+.+++.+=+
T Consensus       222 ---~~~~~---~~~d~vi~~~g~~~~~~~~~~~l~~~G~  254 (333)
T cd08296         222 ---ALQEL---GGAKLILATAPNAKAISALVGGLAPRGK  254 (333)
T ss_pred             ---HHHhc---CCCCEEEECCCchHHHHHHHHHcccCCE
Confidence               11111   2578898875334556666666655433

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK12747 short chain dehydrogenase; Provisional

Probab=83.00  E-value=10  Score=34.15  Aligned_cols=44  Identities=20%  Similarity=0.140  Sum_probs=31.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+ ..++-+.+.+.+.
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~-~~~~~~~~~~~~~   47 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLAND--GALVAIH-YGNRKEEAEETVY   47 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCeEEEE-cCCCHHHHHHHHH
Confidence            478999999999999999998875  5666654 3345454444333

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=82.97  E-value=14  Score=34.76  Aligned_cols=91  Identities=12%  Similarity=0.173  Sum_probs=52.5

Q ss_pred             eeEEEE-ecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVL-GSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~IL-GSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .++.|. |++|++|..++.+.+..  ..+|++.+.  +-++ .+.++++..+.+.-.+....   .              
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~--G~~vi~~~~--~~~~-~~~~~~~g~~~~i~~~~~~~---~--------------  201 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKAD--GIKVINIVR--RKEQ-VDLLKKIGAEYVLNSSDPDF---L--------------  201 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHc--CCEEEEEeC--CHHH-HHHHHHcCCcEEEECCCccH---H--------------
Confidence            356665 99999999999998876  457777543  3333 34556677776654332111   1              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                        +.+.++.....+|+|++++.| ......+.+++.|
T Consensus       202 --~~v~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~  235 (324)
T cd08291         202 --EDLKELIAKLNATIFFDAVGG-GLTGQILLAMPYG  235 (324)
T ss_pred             --HHHHHHhCCCCCcEEEECCCc-HHHHHHHHhhCCC
Confidence              112223333358899987654 3334445555443

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=82.90  E-value=12  Score=34.46  Aligned_cols=66  Identities=14%  Similarity=0.033  Sum_probs=37.7

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEee----cCCHHHHHHHHHhhCCCEEEEeCccchHHHHHH
Q 018600           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAA----GSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaa----gsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~  143 (353)
                      .|.+.|.|+|  +-||..+..-+.+.  .++|+...-    .++-+.+.+...+..+-.++..|-...+.+++.
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~   77 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEET   77 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHH
Confidence            3679999987  67999999888875  566654321    233344443333333223333455555555443

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=82.88  E-value=11  Score=38.79  Aligned_cols=158  Identities=18%  Similarity=0.173  Sum_probs=106.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.-+.|.||||+.|.=+.+-..+.-.+    +.-|++|.++|.....+..|+....-                ..  +  
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~----~aLAgRs~~kl~~l~~~LG~~~~~~p----------------~~--~--   61 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLT----AALAGRSSAKLDALRASLGPEAAVFP----------------LG--V--   61 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCc----hhhccCCHHHHHHHHHhcCccccccC----------------CC--C--
Confidence            357999999999999999988876433    24457899999999999998775431                11  0  


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCc--cCcHHHHHHHHcCCcEeeecccceeecccc--hhHHhhhcCCeEeec---CCch
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGC--AGLKPTVAAIEAGKDIALANKETLIAGGPF--VLPLAHKHNIKILPA---DSEH  228 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~--aGL~pT~~Ai~~gK~IaLANKESLV~aG~l--i~~~a~~~~~~IlPV---DSEH  228 (353)
                       +.++.+++..  +++|+|-.-=+  .|+.=.-+++.+|-+-+=-.-|..++==.+  --+.|++.|+.|+|-   ||=-
T Consensus        62 -p~~~~~~~~~--~~VVlncvGPyt~~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIP  138 (382)
T COG3268          62 -PAALEAMASR--TQVVLNCVGPYTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSIP  138 (382)
T ss_pred             -HHHHHHHHhc--ceEEEeccccccccccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcCc
Confidence             6778888754  67888763322  356566778899998887777877653211  123567789999884   6655


Q ss_pred             hH--HHHhhcCCCCC------CcceEEEEecCCcCCCCCh
Q 018600          229 SA--IFQCIQGLPEG------ALRRIILTASGGAFRDWPV  260 (353)
Q Consensus       229 sA--IfQ~L~g~~~~------~v~kIiLTASGGPFr~~~~  260 (353)
                      +-  +++|++-..+.      ..+-+...-+|+=+..-+.
T Consensus       139 sDl~v~~l~~~~~~d~~~~~~~t~l~l~s~t~~g~S~GTa  178 (382)
T COG3268         139 SDLGVYALLKQALPDGTEELIATHLALGSFTGSGISGGTA  178 (382)
T ss_pred             cchHHHHHHHhhCcccccchhhhheeeeecccCCcccccH
Confidence            54  47777654444      3445555566644444443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=82.77  E-value=7.5  Score=39.83  Aligned_cols=42  Identities=29%  Similarity=0.464  Sum_probs=31.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      .|++.|.|+||.||.....-+.+.  ..+|++++  +|-+.+.+..
T Consensus       178 gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~--r~~~~l~~~~  219 (406)
T PRK07424        178 GKTVAVTGASGTLGQALLKELHQQ--GAKVVALT--SNSDKITLEI  219 (406)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHH
Confidence            478999999999999999888765  57888875  3445554433

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=82.74  E-value=12  Score=35.11  Aligned_cols=92  Identities=18%  Similarity=0.247  Sum_probs=53.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|.| +|++|..++.+.+..  .+ +|++.+  ++-++. +.++++.-..+...+++..                  
T Consensus       169 ~~vlI~g-~g~vg~~~~~~a~~~--g~~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~------------------  224 (344)
T cd08284         169 DTVAVIG-CGPVGLCAVLSAQVL--GAARVFAVD--PVPERL-ERAAALGAEPINFEDAEPV------------------  224 (344)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHc--CCceEEEEc--CCHHHH-HHHHHhCCeEEecCCcCHH------------------
Confidence            6899997 799999999999986  45 566652  333333 3345565322111111111                  


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                        +.+.++.....+|+++++..+-..+...+..++.+-+
T Consensus       225 --~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~  261 (344)
T cd08284         225 --ERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGV  261 (344)
T ss_pred             --HHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence              1223333334689999987665667777777655443

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=82.72  E-value=8.1  Score=37.63  Aligned_cols=91  Identities=13%  Similarity=0.267  Sum_probs=56.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      ++|.|.|+ |.||..++.+.+..  ..+|++.+..  -++..+.++++..+.+.-..+  .+.                 
T Consensus       185 ~~VlV~G~-G~vG~~avq~Ak~~--Ga~vi~~~~~--~~~~~~~~~~~Ga~~vi~~~~--~~~-----------------  240 (360)
T PLN02586        185 KHLGVAGL-GGLGHVAVKIGKAF--GLKVTVISSS--SNKEDEAINRLGADSFLVSTD--PEK-----------------  240 (360)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCC--cchhhhHHHhCCCcEEEcCCC--HHH-----------------
Confidence            57888776 99999999999987  4567765432  345556677788766542211  111                 


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                         +.++.  ..+|+|+++..+...+...+..++.|=++.
T Consensus       241 ---~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv  275 (360)
T PLN02586        241 ---MKAAI--GTMDYIIDTVSAVHALGPLLGLLKVNGKLI  275 (360)
T ss_pred             ---HHhhc--CCCCEEEECCCCHHHHHHHHHHhcCCcEEE
Confidence               11111  147999998554344555666666655433

>COG0057 GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]

Probab=82.72  E-value=10  Score=38.53  Aligned_cols=113  Identities=19%  Similarity=0.156  Sum_probs=74.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh--CCCEEEEe-CccchHHHHHHhhcCCCCcEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF--KPQVVAVR-NESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF--kPk~V~i~-de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .||+|=| -|-||+..++.+.+.+++++|||+.--...+-++.+.+.=  ..+|..-- .++..      +.-.+..+++
T Consensus         2 ikV~ING-fGrIGR~v~ra~~~~~~dieVVaInd~t~~~~~A~LlkyDs~hg~f~~~v~~~~~~------~~v~g~~I~v   74 (335)
T COG0057           2 IKVAING-FGRIGRLVARAALERDGDIEVVAINDLTDPDYLAHLLKYDSVHGRFDGEVEVKDDA------LVVNGKGIKV   74 (335)
T ss_pred             cEEEEec-CcHHHHHHHHHHHhCCCCeEEEEEecCCCHHHHHHHHhhcccCCCCCCcccccCCe------EEECCceEEE
Confidence            4677776 7999999999999987689999998867788888887643  23332210 00000      0001234556


Q ss_pred             EecHH-HHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC--CcEee
Q 018600          154 LAGEQ-GVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG--KDIAL  197 (353)
Q Consensus       154 ~~G~~-gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g--K~IaL  197 (353)
                      +.-.+ ....-... .+|+||.+--.+.|-+-.-.-+++|  |+|.+
T Consensus        75 ~~~~~p~~l~w~d~-gvdiVve~Tg~f~~~e~~~~hl~agGaKkV~i  120 (335)
T COG0057          75 LAERDPANLPWADL-GVDIVVECTGKFTGREKAEKHLKAGGAKKVLI  120 (335)
T ss_pred             EecCChHHCCcccc-CccEEEECCCCccchhhHHHHHHhcCCCEEEE
Confidence            55544 44444433 5889999988888887777678886  76665

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=82.70  E-value=16  Score=35.56  Aligned_cols=92  Identities=15%  Similarity=0.183  Sum_probs=56.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -.+|.|.|+ |.||..++.+.+..  .. +|++..  .+-++ .+.++++..+.+.-..+. ...+.             
T Consensus       186 g~~VlV~G~-G~iG~~a~q~Ak~~--G~~~Vi~~~--~~~~~-~~~a~~~Ga~~~i~~~~~-~~~~~-------------  245 (368)
T TIGR02818       186 GDTVAVFGL-GGIGLSVIQGARMA--KASRIIAID--INPAK-FELAKKLGATDCVNPNDY-DKPIQ-------------  245 (368)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEc--CCHHH-HHHHHHhCCCeEEccccc-chhHH-------------
Confidence            358999996 99999999999876  34 566653  33343 345577887665422110 00111             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                         +.+.++... .+|+|+++..+-..+...+..++.
T Consensus       246 ---~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~  278 (368)
T TIGR02818       246 ---EVIVEITDG-GVDYSFECIGNVNVMRAALECCHK  278 (368)
T ss_pred             ---HHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhc
Confidence               123333333 689999996665667777777755

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=82.62  E-value=3.4  Score=46.83  Aligned_cols=40  Identities=23%  Similarity=0.375  Sum_probs=32.5

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCC
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSN  113 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaagsN  113 (353)
                      ..+++|.|.|+||+||...++-+.+.+  ..++|+++.-..+
T Consensus       969 ~~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~ 1010 (1389)
T TIGR03443       969 STPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKS 1010 (1389)
T ss_pred             CCCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCC
Confidence            446889999999999999998777665  5689999875433

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=82.40  E-value=14  Score=34.49  Aligned_cols=64  Identities=11%  Similarity=-0.029  Sum_probs=39.0

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      .|.+.|.|++  +-||..+-+.+.+.  .++|+ +++++  +.+.+.+.+++..-...+-.|-...+.+++
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~--G~~V~-l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~   77 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAA--GAELA-FTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDA   77 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEE-EEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHH
Confidence            3689999997  66999999888875  67775 44432  235555555554322333345444444443

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=82.35  E-value=22  Score=34.51  Aligned_cols=92  Identities=13%  Similarity=0.188  Sum_probs=56.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ..+|.|+|+ |+||..++.+.+..  .. +|+++.  ++-+++. .++++..+.+.-..+.. +.+.+            
T Consensus       187 g~~VlV~G~-G~vG~~a~~~ak~~--G~~~vi~~~--~~~~~~~-~~~~lGa~~~i~~~~~~-~~~~~------------  247 (368)
T cd08300         187 GSTVAVFGL-GAVGLAVIQGAKAA--GASRIIGID--INPDKFE-LAKKFGATDCVNPKDHD-KPIQQ------------  247 (368)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEe--CCHHHHH-HHHHcCCCEEEcccccc-hHHHH------------
Confidence            468999985 99999999999986  35 466554  3344443 55778876654222110 01111            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                          .+.++... .+|+|+++..+...+.-.+.+++.
T Consensus       248 ----~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~  279 (368)
T cd08300         248 ----VLVEMTDG-GVDYTFECIGNVKVMRAALEACHK  279 (368)
T ss_pred             ----HHHHHhCC-CCcEEEECCCChHHHHHHHHhhcc
Confidence                12222222 689999986665677777777754

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=82.34  E-value=14  Score=34.37  Aligned_cols=97  Identities=14%  Similarity=0.176  Sum_probs=60.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++|++|..++.+.+... ..+|++.+...  +. .+.++++..+.+.-..+    .+.+.            
T Consensus       150 g~~vlV~g~~g~vg~~~~~~a~~~G-~~~v~~~~~~~--~~-~~~~~~~g~~~~~~~~~----~~~~~------------  209 (336)
T cd08252         150 GKTLLIIGGAGGVGSIAIQLAKQLT-GLTVIATASRP--ES-IAWVKELGADHVINHHQ----DLAEQ------------  209 (336)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CcEEEEEcCCh--hh-HHHHHhcCCcEEEeCCc----cHHHH------------
Confidence            4689999999999999999998873 26777765432  22 23346677655432111    11111            


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                          +... ....+|.+++.+.|-..+...+.+++.+-++..
T Consensus       210 ----i~~~-~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~  246 (336)
T cd08252         210 ----LEAL-GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICL  246 (336)
T ss_pred             ----HHhh-CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEE
Confidence                1111 123589999887666677777888876655443

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>PLN02740 Alcohol dehydrogenase-like

Probab=82.32  E-value=12  Score=36.72  Aligned_cols=92  Identities=9%  Similarity=0.091  Sum_probs=56.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -.+|.|+|+ |+||..++.+.+..  .. +|+++..  +-++ .+.++++..+.+.-.++.. ..+.             
T Consensus       199 g~~VlV~G~-G~vG~~a~q~ak~~--G~~~Vi~~~~--~~~r-~~~a~~~Ga~~~i~~~~~~-~~~~-------------  258 (381)
T PLN02740        199 GSSVAIFGL-GAVGLAVAEGARAR--GASKIIGVDI--NPEK-FEKGKEMGITDFINPKDSD-KPVH-------------  258 (381)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCCcEEEEcC--ChHH-HHHHHHcCCcEEEeccccc-chHH-------------
Confidence            358999996 99999999999876  35 4666543  3333 3455777766543211100 0111             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                         +.+.++... .+|+|+++..+...+.-.+.+++.
T Consensus       259 ---~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~  291 (381)
T PLN02740        259 ---ERIREMTGG-GVDYSFECAGNVEVLREAFLSTHD  291 (381)
T ss_pred             ---HHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhc
Confidence               122333333 689999987766677777776655

>PRK05599 hypothetical protein; Provisional

Probab=82.12  E-value=14  Score=33.57  Aligned_cols=43  Identities=16%  Similarity=0.173  Sum_probs=31.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      |.+.|.|+|+-||.....-+.+   .++|+.+  ++|.+.+.+.+++.
T Consensus         1 ~~vlItGas~GIG~aia~~l~~---g~~Vil~--~r~~~~~~~~~~~l   43 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLCH---GEDVVLA--ARRPEAAQGLASDL   43 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHhC---CCEEEEE--eCCHHHHHHHHHHH
Confidence            4588999999999999887763   5777665  35666666555544

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=81.83  E-value=11  Score=36.67  Aligned_cols=45  Identities=13%  Similarity=0.104  Sum_probs=32.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP  126 (353)
                      .+++.|+|. |-+|+++...++++.  .+|...  .++.+. .++++++..
T Consensus       152 g~kvlViG~-G~iG~~~a~~L~~~G--a~V~v~--~r~~~~-~~~~~~~G~  196 (296)
T PRK08306        152 GSNVLVLGF-GRTGMTLARTLKALG--ANVTVG--ARKSAH-LARITEMGL  196 (296)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCC--CEEEEE--ECCHHH-HHHHHHcCC
Confidence            578999996 889999999999874  566553  445444 345555543

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=81.80  E-value=9.7  Score=41.09  Aligned_cols=45  Identities=22%  Similarity=0.231  Sum_probs=33.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+...++
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~--r~~~~~~~~~~~l  458 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAE--GAHVVLAD--LNLEAAEAVAAEI  458 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            367999999999999999988875  57787764  4555555544443

>PRK06720 hypothetical protein; Provisional

Probab=81.76  E-value=16  Score=32.52  Aligned_cols=81  Identities=10%  Similarity=0.057  Sum_probs=47.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEE-EeCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVA-VRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL---~~Q~~eFkPk~V~-i~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|.+.|.|++|.||......+.+.  .++|+.. .+ +-+.+   .++..+..++... ..|-...+++++...      
T Consensus        16 gk~~lVTGa~~GIG~aia~~l~~~--G~~V~l~-~r-~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~------   85 (169)
T PRK06720         16 GKVAIVTGGGIGIGRNTALLLAKQ--GAKVIVT-DI-DQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVIS------   85 (169)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHC--CCEEEEE-EC-CHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH------
Confidence            468999999999999999988875  4666544 33 33333   3444444445432 345555555554321      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEe
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                             .+  +.....+|++|+.
T Consensus        86 -------~~--~~~~G~iDilVnn  100 (169)
T PRK06720         86 -------IT--LNAFSRIDMLFQN  100 (169)
T ss_pred             -------HH--HHHcCCCCEEEEC
Confidence                   11  1123468898886

>PLN02775 Probable dihydrodipicolinate reductase

Probab=81.55  E-value=13  Score=36.98  Aligned_cols=32  Identities=25%  Similarity=0.442  Sum_probs=28.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .||+|.|++|=.|+.+.+-+.+  +.|++|+...
T Consensus        12 i~V~V~Ga~G~MG~~~~~av~~--~~~~Lv~~~~   43 (286)
T PLN02775         12 IPIMVNGCTGKMGHAVAEAAVS--AGLQLVPVSF   43 (286)
T ss_pred             CeEEEECCCChHHHHHHHHHhc--CCCEEEEEec
Confidence            4899999999999999999998  5699999544

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=81.46  E-value=1.3  Score=43.60  Aligned_cols=43  Identities=21%  Similarity=0.325  Sum_probs=31.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-----CceEEEEEeecCCHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHE-----DKFRVVALAAGSNITLLA  118 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~p-----d~F~VvaLaagsNv~lL~  118 (353)
                      |-||+|.|+||+||.+...-+...+     +.++|+.+--..+.+++.
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~   49 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALE   49 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcccccc
Confidence            5689999999999999988776643     235888876555544443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=81.40  E-value=18  Score=33.15  Aligned_cols=64  Identities=8%  Similarity=-0.014  Sum_probs=38.2

Q ss_pred             eeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCC--HHHHHHHHHhhCCCEEEEeCccchHHHHHH
Q 018600           77 KPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSN--ITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaagsN--v~lL~~Q~~eFkPk~V~i~de~~~~~l~~~  143 (353)
                      |.+.|.|++  +-||..+..-+.+.  .++|+.. +++.  .+.+.+.+++++...+.-.|-...+.+++.
T Consensus        11 k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~-~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533         11 KRGLVVGIANEQSIAWGCARAFRAL--GAELAVT-YLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEE-eCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHH
Confidence            689999988  48999999988875  5666553 3321  233455555554323333454444444443

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=81.33  E-value=5.3  Score=41.46  Aligned_cols=47  Identities=21%  Similarity=0.379  Sum_probs=36.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe-ecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA-AGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa-agsNv~lL~~Q~~eF  124 (353)
                      --++|+||||+-|+-+.+-+.+.. .|+-..|+ ||+|-++|.+-.++-
T Consensus         6 yDvVIyGASGfTG~yivee~v~~~-~~~~~slavAGRn~~KL~~vL~~~   53 (423)
T KOG2733|consen    6 YDVVIYGASGFTGKYIVEEAVSSQ-VFEGLSLAVAGRNEKKLQEVLEKV   53 (423)
T ss_pred             eeEEEEccccccceeeHHHHhhhh-cccCceEEEecCCHHHHHHHHHHH
Confidence            358999999999999888766532 46666664 789999998877654

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=81.24  E-value=18  Score=31.83  Aligned_cols=94  Identities=18%  Similarity=0.213  Sum_probs=54.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++| +|..+..+.+...  .+|++++..  -+. .+.++++..+.+.-.....   .               
T Consensus       135 ~~~vli~g~~~-~G~~~~~~a~~~g--~~v~~~~~~--~~~-~~~~~~~g~~~~~~~~~~~---~---------------  190 (271)
T cd05188         135 GDTVLVLGAGG-VGLLAAQLAKAAG--ARVIVTDRS--DEK-LELAKELGADHVIDYKEED---L---------------  190 (271)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHcC--CeEEEEcCC--HHH-HHHHHHhCCceeccCCcCC---H---------------
Confidence            45799999988 9999999998763  677776533  222 3334555443332111000   0               


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                       .+.+. ......+|++++.+.+...+...+.+++.+-++
T Consensus       191 -~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~  228 (271)
T cd05188         191 -EEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRI  228 (271)
T ss_pred             -HHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEE
Confidence             01111 233346999999876645566666666554443

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=81.15  E-value=18  Score=34.41  Aligned_cols=95  Identities=12%  Similarity=0.197  Sum_probs=56.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .++|.|.| +|+||..++.+.+..  ..+ |++..  ++-+.+ +.++++..+.+.-.+....                 
T Consensus       167 g~~vlI~g-~g~iG~~~~~lak~~--G~~~v~~~~--~~~~~~-~~~~~~g~~~~v~~~~~~~-----------------  223 (351)
T cd08285         167 GDTVAVFG-IGPVGLMAVAGARLR--GAGRIIAVG--SRPNRV-ELAKEYGATDIVDYKNGDV-----------------  223 (351)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHc--CCCeEEEEe--CCHHHH-HHHHHcCCceEecCCCCCH-----------------
Confidence            46899997 699999999999876  343 44433  222333 5566777655432211111                 


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                        .+.+.++.....+|+++++..|-..+...+.+++.+=++
T Consensus       224 --~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~  262 (351)
T cd08285         224 --VEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTI  262 (351)
T ss_pred             --HHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEE
Confidence              112223333345899999877666667777777665443

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=80.90  E-value=21  Score=32.85  Aligned_cols=91  Identities=22%  Similarity=0.269  Sum_probs=55.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|.|.|++|++|..++.+.+..  ..+|+..+.  +-+++ +.++++..+.+.-.++  ..  .               
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~--g~~v~~~~~--~~~~~-~~~~~~g~~~~~~~~~--~~--~---------------  203 (325)
T cd05280         148 GPVLVTGATGGVGSIAVAILAKL--GYTVVALTG--KEEQA-DYLKSLGASEVLDRED--LL--D---------------  203 (325)
T ss_pred             CEEEEECCccHHHHHHHHHHHHc--CCEEEEEeC--CHHHH-HHHHhcCCcEEEcchh--HH--H---------------
Confidence            47999999999999999998876  345665543  33343 3446676665532211  10  0               


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                        .+.+......+|.|++...| ..+...+.++..+-+
T Consensus       204 --~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~  238 (325)
T cd05280         204 --ESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYGGV  238 (325)
T ss_pred             --HHHHHhcCCCccEEEECCch-HHHHHHHHhhcCCCE
Confidence              01111222358999988666 677777777765433

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=80.72  E-value=18  Score=37.61  Aligned_cols=100  Identities=13%  Similarity=0.085  Sum_probs=60.6

Q ss_pred             CCCCeeEEEEecCChHhHHH--HHHHHhCCCceEEEEEeecC-------------CHHHHHHHHHhhCCCEEE-EeCccc
Q 018600           73 WDGPKPISVLGSTGSIGTQT--LDIVAEHEDKFRVVALAAGS-------------NITLLADQVKRFKPQVVA-VRNESL  136 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqT--LdVI~~~pd~F~VvaLaags-------------Nv~lL~~Q~~eFkPk~V~-i~de~~  136 (353)
                      -+++|++.|.|+++.||..+  -.-+   .....|+++...+             |.+.+.+.+++...+... -.|-..
T Consensus        38 ~~ggK~aLVTGaSsGIGlA~~IA~al---~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss  114 (398)
T PRK13656         38 ANGPKKVLVIGASSGYGLASRIAAAF---GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS  114 (398)
T ss_pred             CCCCCEEEEECCCchHhHHHHHHHHH---HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC
Confidence            37789999999999999982  2332   2368888876433             445566677766554333 345444


Q ss_pred             hHHHHHHhhcCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCc------------cCcHHHHHHHH
Q 018600          137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGC------------AGLKPTVAAIE  190 (353)
Q Consensus       137 ~~~l~~~l~~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~------------aGL~pT~~Ai~  190 (353)
                      .+...+.+.             .+.+  ....+|++|+.+.-.            +-|+|+...+.
T Consensus       115 ~E~v~~lie-------------~I~e--~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~  165 (398)
T PRK13656        115 DEIKQKVIE-------------LIKQ--DLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYT  165 (398)
T ss_pred             HHHHHHHHH-------------HHHH--hcCCCCEEEECCccCCCCCcccCceeeccccccccccc
Confidence            444443321             1111  124689999886543            25778777754

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=80.48  E-value=19  Score=35.94  Aligned_cols=97  Identities=15%  Similarity=0.186  Sum_probs=55.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|.|.| +|.||..++.+.+..  ..+++. +...+-+. .+.++++..+.+....+...   .               
T Consensus       187 ~~VlV~G-~G~iG~~aiqlAk~~--Ga~~vi-~~d~~~~r-~~~a~~~Ga~~v~~~~~~~~---~---------------  243 (393)
T TIGR02819       187 STVYIAG-AGPVGLAAAASAQLL--GAAVVI-VGDLNPAR-LAQARSFGCETVDLSKDATL---P---------------  243 (393)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHc--CCceEE-EeCCCHHH-HHHHHHcCCeEEecCCcccH---H---------------
Confidence            5788855 599999999998876  455554 33344444 45577787653221111111   1               


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCc--------------cCcHHHHHHHHcCCcEee
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGC--------------AGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~--------------aGL~pT~~Ai~~gK~IaL  197 (353)
                       +.+.++.....+|+|++++.+-              ..+.-.+..++.|=+|.+
T Consensus       244 -~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~  297 (393)
T TIGR02819       244 -EQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGI  297 (393)
T ss_pred             -HHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEE
Confidence             1222222223589999975543              256667777777766543

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=80.33  E-value=24  Score=32.52  Aligned_cols=97  Identities=9%  Similarity=0.117  Sum_probs=58.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|.|.|++|.+|..++.+.+...  .+++..+  ++-+.+.. ++++..+.+.-...  .+.+.               
T Consensus       142 ~~vlI~ga~g~~g~~~~~~a~~~g--~~v~~~~--~~~~~~~~-~~~~g~~~~~~~~~--~~~~~---------------  199 (334)
T PTZ00354        142 QSVLIHAGASGVGTAAAQLAEKYG--AATIITT--SSEEKVDF-CKKLAAIILIRYPD--EEGFA---------------  199 (334)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcC--CEEEEEe--CCHHHHHH-HHHcCCcEEEecCC--hhHHH---------------
Confidence            579999999999999999999873  5555533  33343333 35576654443211  11111               


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                       +.+.++.....+|.+++.. |-..+...+.++..+-++.+
T Consensus       200 -~~~~~~~~~~~~d~~i~~~-~~~~~~~~~~~l~~~g~~i~  238 (334)
T PTZ00354        200 -PKVKKLTGEKGVNLVLDCV-GGSYLSETAEVLAVDGKWIV  238 (334)
T ss_pred             -HHHHHHhCCCCceEEEECC-chHHHHHHHHHhccCCeEEE
Confidence             1122333334689999876 44667777777766555443

>PLN02996 fatty acyl-CoA reductase

Probab=80.30  E-value=2.5  Score=43.75  Aligned_cols=38  Identities=18%  Similarity=0.199  Sum_probs=31.1

Q ss_pred             CCCCeeEEEEecCChHhHHHHHH-HHhCCCceEEEEEee
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDI-VAEHEDKFRVVALAA  110 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdV-I~~~pd~F~VvaLaa  110 (353)
                      +-..|+|.|-|+||+||+..++- ++..|+.-+|.+|.=
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR   46 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR   46 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence            34457899999999999999976 566788778888874

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=80.20  E-value=16  Score=36.08  Aligned_cols=92  Identities=15%  Similarity=0.235  Sum_probs=57.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|+ |.||..++.+.+..  ..+|++++.  +-+...+.++++..+.+.-..+  .+                 
T Consensus       179 g~~VlV~G~-G~vG~~avq~Ak~~--Ga~Vi~~~~--~~~~~~~~a~~lGa~~~i~~~~--~~-----------------  234 (375)
T PLN02178        179 GKRLGVNGL-GGLGHIAVKIGKAF--GLRVTVISR--SSEKEREAIDRLGADSFLVTTD--SQ-----------------  234 (375)
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHc--CCeEEEEeC--ChHHhHHHHHhCCCcEEEcCcC--HH-----------------
Confidence            357888886 99999999999987  356776543  2345566678888776542111  11                 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                         .+.+..  ..+|+|+++..+-..+...+.+++.|=++.
T Consensus       235 ---~v~~~~--~~~D~vid~~G~~~~~~~~~~~l~~~G~iv  270 (375)
T PLN02178        235 ---KMKEAV--GTMDFIIDTVSAEHALLPLFSLLKVSGKLV  270 (375)
T ss_pred             ---HHHHhh--CCCcEEEECCCcHHHHHHHHHhhcCCCEEE
Confidence               112222  248999998544445666666666655443

>PRK06545 prephenate dehydrogenase; Validated

Probab=80.16  E-value=35  Score=33.83  Aligned_cols=39  Identities=18%  Similarity=0.238  Sum_probs=27.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~  118 (353)
                      ++|+|+| +|.||.+...-+++..  ++|.......+-..+.
T Consensus         1 ~~I~iIG-~GliG~siA~~L~~~G--~~v~i~~~~~~~~~~~   39 (359)
T PRK06545          1 RTVLIVG-LGLIGGSLALAIKAAG--PDVFIIGYDPSAAQLA   39 (359)
T ss_pred             CeEEEEE-eCHHHHHHHHHHHhcC--CCeEEEEeCCCHHHHH
Confidence            4799997 5999999999998763  4555555555544443

>PRK08309 short chain dehydrogenase; Provisional

Probab=80.07  E-value=41  Score=30.38  Aligned_cols=62  Identities=21%  Similarity=0.244  Sum_probs=34.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-C-CEEEE-eCccchHHHHHHh
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-P-QVVAV-RNESLLDEIKEAL  144 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk-P-k~V~i-~de~~~~~l~~~l  144 (353)
                      ++.|+|+||.+|. ...-+.+.  .|+|..++  ++-+.+.+...+.. + +..++ .|-...++++..+
T Consensus         2 ~vlVtGGtG~gg~-la~~L~~~--G~~V~v~~--R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i   66 (177)
T PRK08309          2 HALVIGGTGMLKR-VSLWLCEK--GFHVSVIA--RREVKLENVKRESTTPESITPLPLDYHDDDALKLAI   66 (177)
T ss_pred             EEEEECcCHHHHH-HHHHHHHC--cCEEEEEE--CCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHH
Confidence            5899999998876 44444433  57887764  45555544433231 2 22221 3444555555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	353
1r0k_A	388	Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate		3e-53
1q0l_A	406	Crystal Structure Of Dxr In Complex With Fosmidomyc		2e-52
3r0i_A	410	Ispc In Complex With An N-Methyl-Substituted Hydrox		5e-52
1k5h_A	398	1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase Len		6e-52
3anl_A	420	Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate		6e-52
2egh_A	424	Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate		6e-52
1t1r_A	398	Crystal Structure Of The Reductoisomerase Complexed		6e-52
3au8_A	488	Crystal Structure Of The Ternary Complex Of An Isom		1e-50
4gae_A	426	Crystal Structure Of Plasmodium Dxr In Complex With		2e-50
3iie_A	401	1-deoxy-d-xylulose 5-phosphate Reductoisomerase Fro		4e-50
1q0h_A	406	Crystal Structure Of Selenomethionine-Labelled Dxr		3e-49
1jvs_A	400	Crystal Structure Of 1-deoxy-d-xylulose 5-phosphate		1e-48
2jcv_A	398	X-Ray Structure Of 1-Deoxy-D-Xylulose 5-Phosphate R		6e-44
2c82_A	413	X-Ray Structure Of 1-Deoxy-D-Xylulose 5-Phosphate R		7e-44
2jcx_A	398	X-Ray Structure Of Mutant 1-Deoxy-D-Xylulose 5-Phos		4e-43
3a06_A	376	Crystal Structure Of Dxr From Thermooga Maritia, In		2e-37

>pdb|1R0K|A Chain A, Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase From Zymomonas Mobilis Length = 388

Iteration: 1
 Score =  205 bits (522), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 150/229 (65%), Gaps = 3/229 (1%)
Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
           P+ ++VLG+TGSIG  TLD++  + D+++V+AL A  N+  LAD  KR   +   + + S
Sbjct: 4   PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPS 63
Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
           L +++KEALA      E  AG   ++EAA    A   +  I+GCAGLK T+AAI  GK +
Sbjct: 64  LYNDLKEALAG--SSVEAAAGADALVEAAMM-GADWTMAAIIGCAGLKATLAAIRKGKTV 120
Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAF 255
           ALANKE+L++ G  ++    +H   +LP DSEH+AIFQC        +RRII+TASGG F
Sbjct: 121 ALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPF 180
Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
           R   + ++  V    A++HPNWSMG KI++DSAT+ NKGLE+IEA +LF
Sbjct: 181 RTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAFHLF 229

>pdb|1Q0L|A Chain A, Crystal Structure Of Dxr In Complex With Fosmidomycin Length = 406

Iteration: 1
 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 146/242 (60%), Gaps = 10/242 (4%)
Query: 75  GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE 134
           G K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E
Sbjct: 8   GMKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDE 67
Query: 135 SLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD 194
           +    +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK 
Sbjct: 68  ASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKT 127
Query: 195 IALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALR 244
           I LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  + 
Sbjct: 128 ILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVV 187
Query: 245 RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
            I+LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF
Sbjct: 188 SILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLF 247
Query: 305 GA 306
            A
Sbjct: 248 NA 249

>pdb|3R0I|A Chain A, Ispc In Complex With An N-Methyl-Substituted Hydroxamic Acid Length = 410

Iteration: 1
 Score =  201 bits (511), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 105/240 (43%), Positives = 145/240 (60%), Gaps = 10/240 (4%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 14  KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 73
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 74  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 133
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 134 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 193
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 194 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 253

>pdb|1K5H|A Chain A, 1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase Length = 398

Iteration: 1
 Score =  201 bits (511), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 105/240 (43%), Positives = 145/240 (60%), Gaps = 10/240 (4%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 2   KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 61
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 62  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 121
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 122 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 181
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 182 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 241

>pdb|3ANL|A Chain A, Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase (Dxr) Complexed With Pyridin-2-Ylmethylphosphonic Acid Length = 420

Iteration: 1
 Score =  201 bits (510), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 105/240 (43%), Positives = 145/240 (60%), Gaps = 10/240 (4%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 12  KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 71
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 72  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 131
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 132 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 191
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 192 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 251

>pdb|2EGH|A Chain A, Crystal Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase Complexed With A Magnesium Ion, Nadph And Fosmidomycin Length = 424

Iteration: 1
 Score =  201 bits (510), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 105/240 (43%), Positives = 145/240 (60%), Gaps = 10/240 (4%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 12  KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 71
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 72  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 131
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 132 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 191
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 192 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 251

>pdb|1T1R|A Chain A, Crystal Structure Of The Reductoisomerase Complexed With A Bisphosphonate Length = 398

Iteration: 1
 Score =  201 bits (510), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 105/240 (43%), Positives = 145/240 (60%), Gaps = 10/240 (4%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 2   KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 61
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 62  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 121
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 122 LANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 181
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 182 LLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 241

>pdb|3AU8|A Chain A, Crystal Structure Of The Ternary Complex Of An Isomerase Length = 488

Iteration: 1
 Score =  197 bits (500), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 105/253 (41%), Positives = 156/253 (61%), Gaps = 18/253 (7%)
Query: 76  PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVR 132
           P  +++ GSTGSIGT  L+I+ E    E+ F V AL    ++  L +Q + F P+ + + 
Sbjct: 77  PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIH 136
Query: 133 NESLLDEIKEALANVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA 191
           ++S+ +E+KE + N+++ KP IL G++G+ E         +V GI    GL  T+ AI  
Sbjct: 137 DKSVYEELKELVKNIKDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMN 196
Query: 192 GKDIALANKETLIAGGPFVLPLAHKH-NIKILPADSEHSAIFQCIQG---LPEGALR--- 244
            K +ALANKE++++ G F+  L + H N KI+P DSEHSAIFQC+     L    L+   
Sbjct: 197 NKIVALANKESIVSAGFFLKKLLNIHKNAKIIPVDSEHSAIFQCLDNNKVLKTKCLQDNF 256
Query: 245 -------RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 297
                  +I L +SGG F++  +++LK V   +ALKHP W MGKKIT+DSAT+ NKGLEV
Sbjct: 257 SKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEV 316
Query: 298 IEAHYLFGAEYDN 310
           IE H+LF  +Y++
Sbjct: 317 IETHFLFDVDYND 329

>pdb|4GAE|A Chain A, Crystal Structure Of Plasmodium Dxr In Complex With A Pyridine- Containing Inhibitor Length = 426

Iteration: 1
 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 104/253 (41%), Positives = 156/253 (61%), Gaps = 18/253 (7%)
Query: 76  PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVR 132
           P  +++ GSTGSIGT  L+I+ E    E+ F V AL    ++  L +Q + F P+ + + 
Sbjct: 15  PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIH 74
Query: 133 NESLLDEIKEALANVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA 191
           ++S+ +E+KE + N+++ KP IL G++G+ E         +V GI    GL  T+ AI  
Sbjct: 75  DKSVYEELKELVKNIKDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMN 134
Query: 192 GKDIALANKETLIAGGPFVLPLAHKH-NIKILPADSEHSAIFQCIQG--------LPEG- 241
            K +ALANKE++++ G F+  L + H N KI+P DSEHSAIFQC+          L +  
Sbjct: 135 NKIVALANKESIVSAGFFLKKLLNIHKNAKIIPVDSEHSAIFQCLDNNKVIKTKCLQDNF 194
Query: 242 ----ALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEV 297
                + +I L +SGG F++  +++LK V   +ALKHP W MGKKIT+DSAT+ NKGLEV
Sbjct: 195 SKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEV 254
Query: 298 IEAHYLFGAEYDN 310
           IE H+LF  +Y++
Sbjct: 255 IETHFLFDVDYND 267

>pdb|3IIE|A Chain A, 1-deoxy-d-xylulose 5-phosphate Reductoisomerase From Yersinia Pestis. Length = 401

Iteration: 1
 Score =  195 bits (495), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/289 (39%), Positives = 156/289 (53%), Gaps = 30/289 (10%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TL +V  + + F+V AL AG N+  +A Q   F P+  A+ +E  
Sbjct: 5   KQLTILGSTGSIGNSTLSVVRANPELFKVTALVAGRNVREMAQQCLEFSPRYAAMSDEHS 64
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              ++  LA      E+ +GE    E A   D   V+  IVG AGL  T+AAI AGK + 
Sbjct: 65  AKSLRLLLAEQGSDTEVYSGETAACELAALDDVDQVMAAIVGIAGLPSTLAAIRAGKQVL 124
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+LI  G   +    +   ++LP DSEH+AIFQ +            L E  + RI
Sbjct: 125 LANKESLITCGKLFMDEVKRSRAQLLPIDSEHNAIFQSLPERIQRQLGYSSLNENGVSRI 184
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           ILT SGG FR+ P+ +  +V    A  HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A
Sbjct: 185 ILTGSGGPFRETPLSQFSDVTPDQACAHPNWSMGRKISVDSATMMNKGLEYIEARWLFNA 244
Query: 307 EYDNXXXXXXXXXXXXXMVETQVLLYPV----VMLVYSSGAIEITLAVP 351
             +                + +V+L+P      M+ Y  G+I   +  P
Sbjct: 245 SAE----------------QIEVVLHPQSVIHSMVRYHDGSILAQMGTP 277

>pdb|1Q0H|A Chain A, Crystal Structure Of Selenomethionine-Labelled Dxr In Complex With Fosmidomycin Length = 406

Iteration: 1
 Score =  192 bits (487), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 139/242 (57%), Gaps = 10/242 (4%)
Query: 75  GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE 134
           G K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T   +Q   F P+     +E
Sbjct: 8   GXKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRXVEQCLEFSPRYAVXDDE 67
Query: 135 SLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD 194
           +    +K  L     + E+L+G+Q   + A   D   V   IVG AGL PT+AAI AGK 
Sbjct: 68  ASAKLLKTXLQQQGSRTEVLSGQQAACDXAALEDVDQVXAAIVGAAGLLPTLAAIRAGKT 127
Query: 195 IALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALR 244
           I LANKE+L+  G        +   ++LP DSEH+AIFQ +            L +  + 
Sbjct: 128 ILLANKESLVTCGRLFXDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVV 187
Query: 245 RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
            I+LT SGG FR+ P+  L       A +HPNWS G+KI+VDSAT  NKGLE IEA +LF
Sbjct: 188 SILLTGSGGPFRETPLRDLATXTPDQACRHPNWSXGRKISVDSATXXNKGLEYIEARWLF 247
Query: 305 GA 306
            A
Sbjct: 248 NA 249

>pdb|1JVS|A Chain A, Crystal Structure Of 1-deoxy-d-xylulose 5-phosphate Reductoisomerase; A Target Enzyme For Antimalarial Drugs Length = 400

Iteration: 1
 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 138/240 (57%), Gaps = 10/240 (4%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T   +Q   F P+     +E+ 
Sbjct: 2   KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRXVEQCLEFSPRYAVXDDEAS 61
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V   IVG AGL PT+AAI AGK I 
Sbjct: 62  AKLLKTXLQQQGSRTEVLSGQQAACDXAALEDVDQVXAAIVGAAGLLPTLAAIRAGKTIL 121
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI----------QGLPEGALRRI 246
           LANKE+L+  G        +   ++LP DSEH+AIFQ +            L +  +  I
Sbjct: 122 LANKESLVTCGRLFXDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSI 181
Query: 247 ILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGA 306
           +LT SGG FR+ P+  L       A +HPNWS G+KI+VDSAT  NKGLE IEA +LF A
Sbjct: 182 LLTGSGGPFRETPLRDLATXTPDQACRHPNWSXGRKISVDSATXXNKGLEYIEARWLFNA 241

>pdb|2JCV|A Chain A, X-Ray Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase, Dxr, Rv2870c, From Mycobacterium Tuberculosis, In Complex With Fosmidomycin And Nadph Length = 398

Iteration: 1
 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 142/245 (57%), Gaps = 10/245 (4%)
Query: 65  VTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF 124
           VT +     DG   + VLGSTGSIGTQ L ++A++ D+F VV LAAG       D + R 
Sbjct: 10  VTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHL---DTLLRQ 66
Query: 125 KPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKP 184
           + Q   V N ++ DE   A   V + P    G           +A  V+  +VG  GL+P
Sbjct: 67  RAQT-GVTNIAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRP 121
Query: 185 TVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALR 244
           T+AA++ G  +ALANKE+L+AGG  VL  A     +I+P DSEHSA+ QC++G     + 
Sbjct: 122 TLAALKTGARLALANKESLVAGGSLVLRAARPG--QIVPVDSEHSALAQCLRGGTPDEVA 179
Query: 245 RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
           +++LTASGG FR W    L+ V    A  HP WSMG   T++SA+L NKGLEVIE H LF
Sbjct: 180 KLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLF 239
Query: 305 GAEYD 309
           G  YD
Sbjct: 240 GIPYD 244

>pdb|2C82|A Chain A, X-Ray Structure Of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase, Dxr, Rv2870c, From Mycobacterium Tuberculosis Length = 413

Iteration: 1
 Score =  174 bits (441), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 139/237 (58%), Gaps = 10/237 (4%)
Query: 74  DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRN 133
           DG   + VLGSTGSIGTQ L ++A++ D+F VV LAAG       D + R + Q   V N
Sbjct: 10  DGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHL---DTLLRQRAQT-GVTN 65
Query: 134 ESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK 193
            ++ DE   A   V + P    G           +A  V+  +VG  GL+PT+AA++ G 
Sbjct: 66  IAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGA 121
Query: 194 DIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGG 253
            +ALANKE+L+AGG  VL  A     +I+P DSEHSA+ QC++G     + +++LTASGG
Sbjct: 122 RLALANKESLVAGGSLVLRAARPG--QIVPVDSEHSALAQCLRGGTPDEVAKLVLTASGG 179
Query: 254 AFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDN 310
            FR W    L+ V    A  HP WSMG   T++SA+L NKGLEVIE H LFG  YD 
Sbjct: 180 PFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLFGIPYDR 236

>pdb|2JCX|A Chain A, X-Ray Structure Of Mutant 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase, Dxr, Rv2870c, From Mycobacterium Tuberculosis, In Complex With Fosmidomycin And Nadph Length = 398

Iteration: 1
 Score =  171 bits (434), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 142/245 (57%), Gaps = 10/245 (4%)
Query: 65  VTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF 124
           VT +     DG   + VLGSTGSIGTQ L ++A++ D+F VV LAAG       D + R 
Sbjct: 10  VTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHL---DTLLRQ 66
Query: 125 KPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKP 184
           + Q   V N ++ DE   A   V + P    G           +A  V+  +VG  GL+P
Sbjct: 67  RAQT-GVTNIAVADE--HAAQRVGDIP--YHGSDAATRLVEQTEADVVLNALVGALGLRP 121
Query: 185 TVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALR 244
           T+AA++ G  +ALANKE+L+AGG  VL  A     +I+P +SEHSA+ QC++G     + 
Sbjct: 122 TLAALKTGARLALANKESLVAGGSLVLRAARPG--QIVPVNSEHSALAQCLRGGTPDEVA 179
Query: 245 RIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
           +++LTASGG FR W    L+ V    A  HP WSMG   T++SA+L NKGL+VIE H LF
Sbjct: 180 KLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLQVIETHLLF 239
Query: 305 GAEYD 309
           G  YD
Sbjct: 240 GIPYD 244

>pdb|3A06|A Chain A, Crystal Structure Of Dxr From Thermooga Maritia, In Complex Fosmidomycin And Nadph Length = 376

Iteration: 1
 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 141/228 (61%), Gaps = 14/228 (6%)
Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           + + +LG+TGSIGTQTLD++ + +   R++ ++  SN+ L    VK F  + VA+  +  
Sbjct: 4   RTLVILGATGSIGTQTLDVLKKVKG-IRLIGISFHSNLELAFKIVKEFNVKNVAITGDV- 61
Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
             E +++  NV +    +   + ++EA + PD   V   + G +GL+  +A++E  K + 
Sbjct: 62  --EFEDSSINVWKGSHSI---EEMLEALK-PDITMV--AVSGFSGLRAVLASLEHSKRVC 113
Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFR 256
           LANKE+L+ GG  V     +   +++P DSEHSAIFQ ++  PE  + +++LTASGGA R
Sbjct: 114 LANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVME--PE--VEKVVLTASGGALR 169
Query: 257 DWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLF 304
           DW + K+   +  D LKHP W+MG +ITVDSAT+ NK  EV+EA  LF
Sbjct: 170 DWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELF 217

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	353
1q0q_A	406	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	1e-168
1r0k_A	388	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	1e-165
3au8_A	488	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	1e-163
2y1e_A	398	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	1e-162
3a06_A	376	1-deoxy-D-xylulose 5-phosphate reductoisomerase; M	1e-157
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07
3upl_A	446	Oxidoreductase; rossmann fold, NADPH binding; 1.50	3e-06
3c8m_A	331	Homoserine dehydrogenase; structural genomics, APC	2e-05
3do5_A	327	HOM, homoserine dehydrogenase; NP_069768.1, putati	2e-05

>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A Length = 406

 Score =  473 bits (1220), Expect = e-168
 Identities = 118/268 (44%), Positives = 162/268 (60%), Gaps = 10/268 (3%)

Query: 71  KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA 130
               G K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   
Sbjct: 4   HHHSGMKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAV 63

Query: 131 VRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIE 190
           + +E+    +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI 
Sbjct: 64  MDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIR 123

Query: 191 AGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG----------LPE 240
           AGK I LANKE+L+  G   +    +   ++LP DSEH+AIFQ +            L +
Sbjct: 124 AGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQ 183

Query: 241 GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA 300
             +  I+LT SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA
Sbjct: 184 NGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEA 243

Query: 301 HYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
            +LF A    +E++IHPQS+IHSMV  Q
Sbjct: 244 RWLFNASASQMEVLIHPQSVIHSMVRYQ 271

>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A* Length = 388

 Score =  466 bits (1202), Expect = e-165
 Identities = 118/254 (46%), Positives = 166/254 (65%), Gaps = 3/254 (1%)

Query: 75  GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE 134
            P+ ++VLG+TGSIG  TLD++  + D+++V+AL A  N+  LAD  KR   +   + + 
Sbjct: 3   QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADP 62

Query: 135 SLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD 194
           SL +++KEALA      E  AG   ++EAA    A   +  I+GCAGLK T+AAI  GK 
Sbjct: 63  SLYNDLKEALAG--SSVEAAAGADALVEAA-MMGADWTMAAIIGCAGLKATLAAIRKGKT 119

Query: 195 IALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGA 254
           +ALANKE+L++ G  ++    +H   +LP DSEH+AIFQC        +RRII+TASGG 
Sbjct: 120 VALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGP 179

Query: 255 FRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEII 314
           FR   + ++  V    A++HPNWSMG KI++DSAT+ NKGLE+IEA +LF    +  EI+
Sbjct: 180 FRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEIL 239

Query: 315 IHPQSIIHSMVETQ 328
           +HPQS+IHSMVE  
Sbjct: 240 VHPQSVIHSMVEYL 253

>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A* Length = 488

 Score =  463 bits (1193), Expect = e-163
 Identities = 119/318 (37%), Positives = 177/318 (55%), Gaps = 27/318 (8%)

Query: 36  KRKDNATATFGRIVQCSAQGPPPAWPGRAVTETFRK-------TWDGPKPISVLGSTGSI 88
           +RK+NA   +G     +          R       K           P  +++ GSTGSI
Sbjct: 32  RRKNNAYINYGI--GYNGPDNKITKSRRCKRIKLCKKDLIDIGAIKKPINVAIFGSTGSI 89

Query: 89  GTQTLDIVAEHE---DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA 145
           GT  L+I+ E     + F V AL    ++  L +Q + F P+ + + ++S+ +E+KE + 
Sbjct: 90  GTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVK 149

Query: 146 NVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI 204
           N+++ KP IL G++G+ E         +V GI    GL  T+ AI   K +ALANKE+++
Sbjct: 150 NIKDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIV 209

Query: 205 AGGPFVLPLAHKH-NIKILPADSEHSAIFQCIQG-------------LPEGALRRIILTA 250
           + G F+  L + H N KI+P DSEHSAIFQC+                    + +I L +
Sbjct: 210 SAGFFLKKLLNIHKNAKIIPVDSEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCS 269

Query: 251 SGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDN 310
           SGG F++  +++LK V   +ALKHP W MGKKIT+DSAT+ NKGLEVIE H+LF  +Y++
Sbjct: 270 SGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIETHFLFDVDYND 329

Query: 311 IEIIIHPQSIIHSMVETQ 328
           IE+I+H + IIHS VE  
Sbjct: 330 IEVIVHKECIIHSCVEFI 347

>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A Length = 398

 Score =  457 bits (1178), Expect = e-162
 Identities = 114/272 (41%), Positives = 156/272 (57%), Gaps = 13/272 (4%)

Query: 59  AWPGRA-VTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITL 116
           A      VT +     DG   + VLGSTGSIGTQ L ++A++ D+F VV LAAG +++  
Sbjct: 3   AHHHHHHVTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDT 62

Query: 117 LADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGI 176
           L  Q  +     +AV +E     + +             G           +A  V+  +
Sbjct: 63  LLRQRAQTGVTNIAVADEHAAQRVGD---------IPYHGSDAATRLVEQTEADVVLNAL 113

Query: 177 VGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 236
           VG  GL+PT+AA++ G  +ALANKE+L+AGG  VL  A     +I+P DSEHSA+ QC++
Sbjct: 114 VGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAARPG--QIVPVDSEHSALAQCLR 171

Query: 237 GLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLE 296
           G     + +++LTASGG FR W    L+ V    A  HP WSMG   T++SA+L NKGLE
Sbjct: 172 GGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLE 231

Query: 297 VIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQ 328
           VIE H LFG  YD I++++HPQSIIHSMV   
Sbjct: 232 VIETHLLFGIPYDRIDVVVHPQSIIHSMVTFI 263

>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A* Length = 376

 Score =  444 bits (1144), Expect = e-157
 Identities = 88/253 (34%), Positives = 140/253 (55%), Gaps = 14/253 (5%)

Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
            + + +LG+TGSIGTQTLD++ +     R++ ++  SN+ L    VK F  + VA+  + 
Sbjct: 3   ERTLVILGATGSIGTQTLDVLKKV-KGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDV 61

Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
             ++             +  G   + E          +  + G +GL+  +A++E  K +
Sbjct: 62  EFEDSS---------INVWKGSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEHSKRV 112

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAF 255
            LANKE+L+ GG  V     +   +++P DSEHSAIFQ ++      + +++LTASGGA 
Sbjct: 113 CLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQVMEP----EVEKVVLTASGGAL 168

Query: 256 RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIII 315
           RDW + K+   +  D LKHP W+MG +ITVDSAT+ NK  EV+EA  LF   ++ IE+ I
Sbjct: 169 RDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELFELPFEKIEVKI 228

Query: 316 HPQSIIHSMVETQ 328
           H + ++H  V   
Sbjct: 229 HREGLVHGAVVLP 241

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 7e-07
 Identities = 36/278 (12%), Positives = 78/278 (28%), Gaps = 93/278 (33%)

Query: 101 DKFRVVALAAGSNITLLADQVKRFK--PQVVAVRN---ESLLDEIKEALANVEEKPEILA 155
              +           +  +Q  R     QV A  N        ++++AL  +  +P    
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL--RP---- 149

Query: 156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAH 215
             + V           ++ G++G  G K T  A++      +   +  +    F L L +
Sbjct: 150 -AKNV-----------LIDGVLGS-G-K-TWVALDVCLSYKV---QCKMDFKIFWLNLKN 191

Query: 216 KHN----IKIL-----PADSEHSAIFQCIQGLP------EGALRR-----------IILT 249
            ++    +++L       D   ++       +       +  LRR           ++L 
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL- 250

Query: 250 ASGGAFRD-WPVEKLK-------------EVKVADALKHPNWSMGKKITVDSATLFNKGL 295
                  +    +                  +V D L           T  S    +  L
Sbjct: 251 ------LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS------AATTTHISLDHHSMTL 298

Query: 296 EVIEAHYLFGAEYDNIEI--------IIHPQSIIHSMV 325
              E   L   +Y +             +P+ +  S++
Sbjct: 299 TPDEVKSLL-LKYLDCRPQDLPREVLTTNPRRL--SII 333

>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A* Length = 446

 Score = 47.5 bits (112), Expect = 3e-06
 Identities = 38/247 (15%), Positives = 81/247 (32%), Gaps = 19/247 (7%)

Query: 77  KPISV--LGSTGSIGTQTLDIVA--EHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR 132
           KPI +  +G  G +GT  +  VA  +  +   + A    +    +       +    A  
Sbjct: 22  KPIRIGLIG-AGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATT 80

Query: 133 NESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG 192
             ++   I+     V +  +++     +       D +   TGI    G +  +AAI  G
Sbjct: 81  ESAMTRAIEAGKIAVTDDNDLILSNPLI-------DVIIDATGIPE-VGAETGIAAIRNG 132

Query: 193 KDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASG 252
           K + + N E  +  GP++   A K  +       +  +    +          ++    G
Sbjct: 133 KHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAGDEPSSCMELIEFVSALGYEVVSAGKG 192

Query: 253 GAFRDWPVEKLKEVKVADALKHPNWSM------GKKITVDSATLFNKGLEVIEAHYLFGA 306
                       + +     ++ N  +      G K  V+ A + N    V +   + G 
Sbjct: 193 KNNPLNFDATPDDYRQEADRRNMNVRLLVEFIDGSKTMVEMAAIANATGLVPDIAGMHGP 252

Query: 307 EYDNIEI 313
                ++
Sbjct: 253 RASIDQL 259

>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A* Length = 331

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 33/152 (21%), Positives = 52/152 (34%), Gaps = 24/152 (15%)

Query: 79  ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD 138
           +S+ G  G++G   L I+    ++ R      G    ++           VA    S  +
Sbjct: 9   LSIFG-LGNVGLNLLRIIRSFNEENR-----LGLKFNVVF----------VADSLHSYYN 52

Query: 139 EIKEALANVEEKPEI----LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTV----AAIE 190
           E  +    +  K +     L  E      A   D   VV      A  K  +       E
Sbjct: 53  ERIDIGKVISYKEKGSLDSLEYESISASEALARDFDIVVDATPASADGKKELAFYKETFE 112

Query: 191 AGKDIALANKETLIAGGPFVLPLAHKHNIKIL 222
            GKD+  ANK  L    P ++  A  +N +I 
Sbjct: 113 NGKDVVTANKSGLANFWPEIMEYARSNNRRIR 144

>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus} Length = 327

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 24/149 (16%), Positives = 57/149 (38%), Gaps = 20/149 (13%)

Query: 79  ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD 138
           I+++G  G++G    +++    +               +   +  FK   VA    S+  
Sbjct: 5   IAIVG-FGTVGQGVAELLIRKRE--------------EIEKAIGEFKVTAVADSKSSISG 49

Query: 139 EIK-EALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKP----TVAAIEAGK 193
           +        ++ +  +L  +   IE  R  D   ++   V              A++ GK
Sbjct: 50  DFSLVEALRMKRETGMLRDDAKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGK 109

Query: 194 DIALANKETLIAGGPFVLPLAHKHNIKIL 222
            +  +NK  L+A    ++ LA ++ ++++
Sbjct: 110 HVVTSNKGPLVAEFHGLMSLAERNGVRLM 138

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	353
1q0q_A	406	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	100.0
3au8_A	488	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	100.0
2y1e_A	398	1-deoxy-D-xylulose 5-phosphate reductoisomerase; o	100.0
3a06_A	376	1-deoxy-D-xylulose 5-phosphate reductoisomerase; M	100.0
1r0k_A	388	1-deoxy-D-xylulose 5-phosphate reductoisomerase; N	100.0
3upl_A	446	Oxidoreductase; rossmann fold, NADPH binding; 1.50	98.92
3ing_A	325	Homoserine dehydrogenase; NP_394635.1, structural	98.82
3do5_A	327	HOM, homoserine dehydrogenase; NP_069768.1, putati	98.75
3mtj_A	444	Homoserine dehydrogenase; rossmann-fold, PSI, MCSG	98.65
3oqb_A	383	Oxidoreductase; structural genomics, protein struc	98.61
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	98.6
3mz0_A	344	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd;	98.58
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	98.57
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	98.53
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	98.47
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	98.46
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	98.46
3btv_A	438	Galactose/lactose metabolism regulatory protein GA	98.4
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	98.39
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	98.37
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	98.32
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	98.32
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	98.31
2nvw_A	479	Galactose/lactose metabolism regulatory protein GA	98.3
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	98.28
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	98.24
3dty_A	398	Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram	98.24
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	98.24
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	98.21
3c8m_A	331	Homoserine dehydrogenase; structural genomics, APC	98.19
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	98.19
3m2t_A	359	Probable dehydrogenase; PSI, SGXNY, structural gen	98.18
3moi_A	387	Probable dehydrogenase; structural genomics, PSI2,	98.16
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	98.16
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	98.15
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	98.05
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	98.0
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	98.0
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	97.97
2p2s_A	336	Putative oxidoreductase; YP_050235.1, structural g	97.92
3c1a_A	315	Putative oxidoreductase; ZP_00056571.1, oxidoreduc	97.9
3ip3_A	337	Oxidoreductase, putative; structural genomics, PSI	97.88
1h6d_A	433	Precursor form of glucose-fructose oxidoreductase;	97.85
3fhl_A	362	Putative oxidoreductase; NAD-binding domain, PSI-2	97.76
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	97.74
4had_A	350	Probable oxidoreductase protein; structural genomi	97.74
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	97.71
1ebf_A	358	Homoserine dehydrogenase; dinucleotide, NAD, dimer	97.71
3f4l_A	345	Putative oxidoreductase YHHX; structural genomics,	97.69
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.64
2ixa_A	444	Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver	97.61
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	97.58
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	97.56
1ydw_A	362	AX110P-like protein; structural genomics, protein	97.54
4h3v_A	390	Oxidoreductase domain protein; structural genomics	97.53
2ejw_A	332	HDH, homoserine dehydrogenase; NAD-dependent, oxid	97.31
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.2
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.1
4gmf_A	372	Yersiniabactin biosynthetic protein YBTU; rossmann	97.01
2czc_A	334	Glyceraldehyde-3-phosphate dehydrogenase; glycolys	97.0
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.9
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	96.81
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.64
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	96.61
4ew6_A	330	D-galactose-1-dehydrogenase protein; nysgrc, PSI-b	96.6
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.59
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.58
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.5
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	96.45
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.43
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	96.38
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.33
1u8f_O	335	GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l	96.11
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	96.11
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	96.05
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	95.99
1cf2_P	337	Protein (glyceraldehyde-3-phosphate dehydrogenase)	95.98
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.95
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.95
1lc0_A	294	Biliverdin reductase A; oxidoreductase, tetrapyrro	95.93
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.91
3bio_A	304	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.91
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	95.9
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	95.84
1b7g_O	340	Protein (glyceraldehyde 3-phosphate dehydrogenase;	95.84
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.82
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.8
3nkl_A	141	UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fo	95.74
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.74
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.73
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.61
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.59
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.59
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	95.53
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	95.51
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	95.5
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.49
2yyy_A	343	Glyceraldehyde-3-phosphate dehydrogenase; glyceral	95.46
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.46
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.46
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	95.43
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.42
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.36
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.36
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.35
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	95.34
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	95.34
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.33
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	95.33
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.3
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	95.29
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.22
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.2
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	95.2
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.15
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	95.14
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	95.14
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.09
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.08
3cps_A	354	Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g	95.07
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	95.06
4eye_A	342	Probable oxidoreductase; structural genomics, niai	95.03
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	95.01
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	95.0
3e5r_O	337	PP38, glyceraldehyde-3-phosphate dehydrogenase, cy	94.98
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	94.9
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	94.89
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	94.88
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	94.85
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	94.85
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	94.85
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	94.83
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	94.81
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.8
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	94.71
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	94.68
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	94.65
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	94.64
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	94.64
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	94.64
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	94.64
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	94.63
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	94.6
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	94.59
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	94.57
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	94.57
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	94.57
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	94.56
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	94.55
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	94.54
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	94.51
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	94.5
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	94.5
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	94.5
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	94.47
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	94.46
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	94.44
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	94.44
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	94.43
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	94.41
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	94.4
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	94.39
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	94.37
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	94.36
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	94.34
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	94.33
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	94.29
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	94.28
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	94.27
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	94.25
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	94.25
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	94.24
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	94.22
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	94.21
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	94.2
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	94.19
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	94.17
1rm4_O	337	Glyceraldehyde 3-phosphate dehydrogenase A; rossma	94.17
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	94.16
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	94.1
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	94.1
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	94.09
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	94.08
4dqx_A	277	Probable oxidoreductase protein; structural genomi	94.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	93.99
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	93.99
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	93.98
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	93.98
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	93.97
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	93.96
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	93.95
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	93.94
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	93.94
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	93.93
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	93.91
2x5j_O	339	E4PDH, D-erythrose-4-phosphate dehydrogenase; oxid	93.89
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	93.89
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	93.86
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	93.85
3b1j_A	339	Glyceraldehyde 3-phosphate dehydrogenase (NADP+);	93.83
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	93.83
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	93.83
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	93.81
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	93.81
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	93.81
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	93.79
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	93.79
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	93.74
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	93.73
1xq1_A	266	Putative tropinone reducatse; structural genomics,	93.73
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	93.73
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	93.72
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	93.71
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	93.69
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	93.68
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	93.68
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	93.66
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	93.66
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	93.64
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	93.64
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	93.62
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	93.62
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	93.61
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	93.6
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	93.59
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	93.58
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	93.57
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	93.55
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	93.54
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	93.51
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	93.5
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	93.49
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	93.46
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	93.46
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	93.46
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	93.45
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	93.43
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	93.43
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	93.43
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	93.43
3auf_A	229	Glycinamide ribonucleotide transformylase 1; struc	93.43
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	93.42
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	93.42
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	93.41
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	93.41
1f06_A	320	MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH	93.41
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	93.39
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	93.39
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	93.38
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	93.38
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	93.36
1spx_A	278	Short-chain reductase family member (5L265); paral	93.34
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	93.32
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	93.31
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	93.31
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	93.3
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	93.3
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	93.28
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	93.26
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	93.26
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	93.25
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	93.23
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	93.23
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	93.2
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	93.19
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	93.15
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	93.15
3da8_A	215	Probable 5'-phosphoribosylglycinamide formyltransf	93.14
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	93.14
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	93.13
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	93.11
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	93.11
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	93.1
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	93.09
4f6l_B	508	AUSA reductase domain protein; thioester reductase	93.09
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	93.06
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	93.05
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	93.05
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	93.02
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	93.01
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	93.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	93.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	93.0
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	92.99
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	92.99
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	92.98
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	92.97
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	92.95
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	92.94
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	92.91
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	92.91
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	92.87
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	92.82
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	92.8
3cxt_A	291	Dehydrogenase with different specificities; rossma	92.74
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	92.71
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	92.64
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	92.59
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	92.59
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	92.54
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	92.54
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	92.54
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	92.54
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	92.53
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	92.52
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	92.51
1obf_O	335	Glyceraldehyde 3-phosphate dehydrogenase; glycolyt	92.48
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	92.45
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	92.44
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	92.43
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	92.43
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	92.43
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	92.4
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	92.39
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	92.38
2ywr_A	216	Phosphoribosylglycinamide formyltransferase; rossm	92.38
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	92.35
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	92.32
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	92.3
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	92.28
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	92.26
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	92.21
4f6c_A	427	AUSA reductase domain protein; thioester reductase	92.21
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	92.16
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	92.15
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	92.14
1gad_O	330	D-glyceraldehyde-3-phosphate dehydrogenase; oxidor	92.13
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	92.12
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	92.12
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	92.11
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	92.11
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	92.05
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	92.05
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	92.05
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	92.05
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	92.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	91.97
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	91.96
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	91.94
2g82_O	331	GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G	91.9
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	91.89
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	91.87
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	91.87
3cmc_O	334	GAPDH, glyceraldehyde-3-phosphate dehydrogenase; m	91.86
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	91.78
1xkq_A	280	Short-chain reductase family member (5D234); parra	91.77
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	91.76
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	91.72
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	91.72
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	91.7
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	91.69
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	91.69
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	91.61
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	91.59
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	91.58
1xhl_A	297	Short-chain dehydrogenase/reductase family member	91.57
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	91.56
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	91.55
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	91.53
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	91.5
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	91.5
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	91.48
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	91.44
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	91.4
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	91.39
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	91.37
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	91.35
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	91.34
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	91.29
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	91.29
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	91.28
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	91.28
3imf_A	257	Short chain dehydrogenase; structural genomics, in	91.2
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	91.14
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	91.12
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	91.12
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	91.07
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	91.05
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	91.03
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	91.03
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	91.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	90.97
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	90.94
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	90.73
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	90.68
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	90.65
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	90.64
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	90.61
2q5c_A	196	NTRC family transcriptional regulator; structural	90.59
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	90.56
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	90.51
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	90.49
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	90.47
3rih_A	293	Short chain dehydrogenase or reductase; structural	90.46
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	90.42
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	90.41
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	90.4
3gms_A	340	Putative NADPH:quinone reductase; structural genom	90.4
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	90.4
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	90.38
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	90.37
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	90.26
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	90.25
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	90.22
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	90.14
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	90.0
4e7p_A	150	Response regulator; DNA binding, cytosol, transcri	90.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	89.95
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	89.93
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	89.92
1hdg_O	332	Holo-D-glyceraldehyde-3-phosphate dehydrogenase; o	89.9
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	89.86
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	89.86
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	89.85
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	89.82
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	89.81
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	89.68
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	89.67
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	89.66
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	89.65
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	89.52
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	89.18
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	89.13
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	89.11
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	89.03
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	88.92
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	88.8
2yv2_A	297	Succinyl-COA synthetase alpha chain; COA-binding d	88.77
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	88.67
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	88.34
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	88.29
3tqr_A	215	Phosphoribosylglycinamide formyltransferase; purin	88.26
3ff4_A	122	Uncharacterized protein; structural genomics, PSI-	88.22
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	88.19
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	88.19
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	88.12
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	88.07
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	88.07
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	88.06
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	88.06
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	87.87
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	87.84
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	87.77
2duw_A	145	Putative COA-binding protein; ligand binding prote	87.55
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	87.54
1j5p_A	253	Aspartate dehydrogenase; TM1643, structural genomi	87.53
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	87.48
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	87.46
3p9x_A	211	Phosphoribosylglycinamide formyltransferase; struc	87.36
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	87.31
1jkx_A	212	GART;, phosphoribosylglycinamide formyltransferase	87.28
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	87.27
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	87.23
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	87.11
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	87.04
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	87.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	86.66
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	86.64
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	86.62
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	86.6
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	86.58
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	86.52
3keo_A	212	Redox-sensing transcriptional repressor REX; DNA b	86.49
2d2i_A	380	Glyceraldehyde 3-phosphate dehydrogenase; rossmann	86.48
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	86.46
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	86.42
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	86.42
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	86.26
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	86.24
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	86.22
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	86.22
4ds3_A	209	Phosphoribosylglycinamide formyltransferase; struc	86.18
2dt5_A	211	AT-rich DNA-binding protein; REX, NADH, NAD, rossm	86.02
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	85.98
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	85.82
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	85.67
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	85.66
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	85.65
3kcq_A	215	Phosphoribosylglycinamide formyltransferase; struc	85.64
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	85.63
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	85.1
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	85.01
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	84.86
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	84.58
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	84.17
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	84.0
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	83.99
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	83.97
1meo_A	209	Phosophoribosylglycinamide formyltransferase; puri	83.97
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	83.91
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	83.66
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	83.65
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	83.59
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	83.53
3av3_A	212	Phosphoribosylglycinamide formyltransferase; struc	82.99
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	82.87
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	82.87
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	82.76
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	82.18
1jfl_A	228	Aspartate racemase; alpha-beta structure, HOMO-dim	81.93

>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A

Probab=100.00  E-value=1.1e-121  Score=905.49  Aligned_cols=265  Identities=45%  Similarity=0.694  Sum_probs=253.2

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      -.+||+|+|||||||||+||||||++|||+|+|+||+||+|+++|++||++|+|++|++.|++.+.+|++.|...+.+++
T Consensus         6 ~~~~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag~nv~~L~~q~~~f~p~~v~v~d~~~~~~L~~~l~~~~~~~~   85 (406)
T 1q0q_A            6 HSGMKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTE   85 (406)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCE
T ss_pred             cCCceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhcCCCCcE
Confidence            36899999999999999999999999999999999999999999999999999999999999999999998832245689


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHH
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIF  232 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIf  232 (353)
                      ++.|++|+++++..+++|+||+||||++||.||++|+++||+|||||||||||||++||+++++++++|+||||||||||
T Consensus        86 v~~G~~~l~~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLANKEsLV~aG~lv~~~a~~~~~~ilPVDSEHsAIf  165 (406)
T 1q0q_A           86 VLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIF  165 (406)
T ss_dssp             EEESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECCHHHHHHHTHHHHHHHHHHTCEEEECSHHHHHHH
T ss_pred             EEeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCeEEEechHHHHhchHHHHHHHHHcCCeEEEecchHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhh----cCC------CCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHhhh
Q 018600          233 QCI----QGL------PEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHY  302 (353)
Q Consensus       233 Q~L----~g~------~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~  302 (353)
                      |||    +|+      +.++|+||||||||||||+|++|+|++|||+|||+||||+||+|||||||||||||||||||||
T Consensus       166 Q~L~~~~~g~~~~~~~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG~KITIDSATmmNKGLEvIEA~~  245 (406)
T 1q0q_A          166 QSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARW  245 (406)
T ss_dssp             HTSCHHHHTTTTTSCTGGGTEEEEEEEECCCTTTTSCGGGGGGCCHHHHHCCSSCCCCHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHcccccCCccccccCCcccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCCCeeeehHHhHHhhhHHHHHHHH
Confidence            999    886      5456999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCceEEEEcCCcceEEEEEecCCceeeeee
Q 018600          303 LFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       303 LF~i~~d~IevvIHPqSiIHsmVef~DGs~~~~~~  337 (353)
                      |||+|||+|||||||||||||||||+|||+.+.|-
T Consensus       246 LF~~~~d~I~VvVHPQSiIHSmVef~DGSv~AQlg  280 (406)
T 1q0q_A          246 LFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLG  280 (406)
T ss_dssp             HHTCCGGGEEEEECTTCCEEEEEEETTSCEEEEEC
T ss_pred             HcCCCHHHeEEEECCCCceeEEEEEcCCcEEEEeC
Confidence            99999999999999999999999999999998873

>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*

Probab=100.00  E-value=7.5e-120  Score=904.61  Aligned_cols=267  Identities=43%  Similarity=0.690  Sum_probs=243.8

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHh---CCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhc-
Q 018600           71 KTWDGPKPISVLGSTGSIGTQTLDIVAE---HEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN-  146 (353)
Q Consensus        71 ~~~~~~k~I~ILGSTGSIGtqTLdVI~~---~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~-  146 (353)
                      ....+||+|+|||||||||+||||||++   |||+|+|+||+||+|+++|++||++|+|++|++.|++.+.+|++.|.. 
T Consensus        72 ~~~~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~v~v~d~~~~~~L~~~l~~~  151 (488)
T 3au8_A           72 GAIKKPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNI  151 (488)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSEEEESCGGGTHHHHTGGGGS
T ss_pred             hhhhcceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhhh
Confidence            3456789999999999999999999999   789999999999999999999999999999999999999999998853 


Q ss_pred             CCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhc-CCeEeecC
Q 018600          147 VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH-NIKILPAD  225 (353)
Q Consensus       147 ~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~-~~~IlPVD  225 (353)
                      .+.+++++.|++|++++++.+++|+||+||||++||.||++|+++||+|||||||||||||+++|++++++ +++|+|||
T Consensus       152 ~~~~~~v~~G~egl~e~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~IALANKESLV~aG~Lv~~~a~~~~g~~IlPVD  231 (488)
T 3au8_A          152 KDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHKNAKIIPVD  231 (488)
T ss_dssp             TTCCCEEEEHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEECCSHHHHHHHHHHHHHHHHSTTCEEEECS
T ss_pred             cCCCceEEeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHHCCCcEEEecchhhhhchHHHHHHHHhcCCCeEEEec
Confidence            23568999999999999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             CchhHHHHhhcCC-------------CCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccc
Q 018600          226 SEHSAIFQCIQGL-------------PEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFN  292 (353)
Q Consensus       226 SEHsAIfQ~L~g~-------------~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmN  292 (353)
                      ||||||||||+|+             +.++|+||||||||||||+|++|+|++|||+|||+||||+||+|||||||||||
T Consensus       232 SEHsAIFQcL~g~~~~~~~~~~~~~~~~~~V~kIiLTASGGPFR~~~~eeL~~VTpeqALkHPnWsMG~KITIDSATMmN  311 (488)
T 3au8_A          232 SEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMN  311 (488)
T ss_dssp             HHHHHHHHHSCHHHHTTSCTTCTTHHHHTTEEEEEEEECCCTTTTCCHHHHTTCCTTTC---------CHHHHHHHSSHH
T ss_pred             hhHHHHHHHhcCCcccccccccccccccccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCCceeeeehHhHhh
Confidence            9999999999986             435699999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHhhhhcCCCCCceEEEEcCCcceEEEEEecCCceeeeee
Q 018600          293 KGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       293 KgLEvIEA~~LF~i~~d~IevvIHPqSiIHsmVef~DGs~~~~~~  337 (353)
                      |||||||||||||+|||+|||||||||||||||||.|||+.+.|-
T Consensus       312 KGLEvIEA~~LF~v~~d~IeVvVHPQSIIHSmVef~DGSviAQlg  356 (488)
T 3au8_A          312 KGLEVIETHFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMY  356 (488)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEECTTCCEEEEEEETTSCEEEEEC
T ss_pred             hhHHHhHHHHHcCCCHHHeEEEECCCCceeEEEEEeCCcEEEEeC
Confidence            999999999999999999999999999999999999999998873

>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A

Probab=100.00  E-value=1.1e-119  Score=889.12  Aligned_cols=256  Identities=43%  Similarity=0.672  Sum_probs=236.9

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCC
Q 018600           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        71 ~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-gsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~  149 (353)
                      ...++||+|+|||||||||+||||||++|||+|+|+||+| |+|+++|++||++|+|++|++.|++.+.+    .     
T Consensus        16 ~~~~~mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p~~v~v~d~~~~~~----~-----   86 (398)
T 2y1e_A           16 GRADGRLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQR----V-----   86 (398)
T ss_dssp             ----CCEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCCCCEEESCHHHHHH----H-----
T ss_pred             cCcCCceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCCCEEEEcCHHHhhh----c-----
Confidence            4447789999999999999999999999999999999999 99999999999999999999999887755    1     


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchh
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHS  229 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHs  229 (353)
                      +++++.|++|+++++..+++|+||+||||++||.||++|+++||+|||||||||||||++|++++++++  |+|||||||
T Consensus        87 ~~~v~~G~~~l~~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaLANKEsLV~aG~lv~~~a~~~~--ilPVDSEHs  164 (398)
T 2y1e_A           87 GDIPYHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAARPGQ--IVPVDSEHS  164 (398)
T ss_dssp             CCCSEESTTHHHHHHHHSCCSEEEECCCSGGGHHHHHHHHHHTCEEEECCHHHHHHHTHHHHHHCCTTC--EEECSHHHH
T ss_pred             CCEEEecHHHHHHHhcCCCCCEEEEeCcCHHHHHHHHHHHHCCCceEEcccchheecHHHHHHHHHHcC--ceEecchHh
Confidence            368999999999999988999999999999999999999999999999999999999999999999988  999999999


Q ss_pred             HHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHhhhhcCCCCC
Q 018600          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYD  309 (353)
Q Consensus       230 AIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d  309 (353)
                      ||||||+|++.++|+||||||||||||+|++|+|++|||+|||+||||+||+||||||||||||||||||||||||+|||
T Consensus       165 AIfQ~L~g~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG~KITIDSATmmNKGLEvIEA~~LF~~~~d  244 (398)
T 2y1e_A          165 ALAQCLRGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLFGIPYD  244 (398)
T ss_dssp             HHHHHGGGSCGGGEEEEEEEECCCTTTTCCHHHHTTCCTTTC-------CCHHHHHHHHHSHHHHHHHHHHHHHHCCCGG
T ss_pred             HHHHHhCCCCcccccEEEEECCccccCCCCHHHHhCCCHHHHhhCCCcccCceeeehhHhHhhhhHHHHHHHHHcCCCHH
Confidence            99999999876679999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEcCCcceEEEEEecCCceeeeee
Q 018600          310 NIEIIIHPQSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       310 ~IevvIHPqSiIHsmVef~DGs~~~~~~  337 (353)
                      +|||||||||||||||||+|||+.+.|-
T Consensus       245 ~I~VvVHPQSiIHSmVef~DGSv~Aqlg  272 (398)
T 2y1e_A          245 RIDVVVHPQSIIHSMVTFIDGSTIAQAS  272 (398)
T ss_dssp             GEEEEECTTCCEEEEEEETTSCEEEEEC
T ss_pred             HeEEEECCCCceeEEEEEeCCcEEEEeC
Confidence            9999999999999999999999998873

>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*

Probab=100.00  E-value=3.1e-106  Score=791.33  Aligned_cols=246  Identities=36%  Similarity=0.617  Sum_probs=237.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchH-HHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD-EIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~-~l~~~l~~~~~~~~v~  154 (353)
                      +|||+|||||||||+|||||+++| |+|+|+||+|++|+++|.+||++|+|++|++.|++.+. +|++          .+
T Consensus         3 ~k~i~ILGsTGSIG~~tldVi~~~-~~~~vvaL~a~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~----------~~   71 (376)
T 3a06_A            3 ERTLVILGATGSIGTQTLDVLKKV-KGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFEDSSIN----------VW   71 (376)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHS-CSEEEEEEEESSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSE----------EE
T ss_pred             cceEEEECCCCHHHHHHHHHHHhC-CCeEEEEEEccCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHH----------Hc
Confidence            389999999999999999999999 99999999999999999999999999999999998775 4442          37


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHHHh
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC  234 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~  234 (353)
                      .|++|++++++.+++|+|++||+|++||.||++|+++||+|+||||||||+||++++++++++|++|+||||||||||||
T Consensus        72 ~G~~~l~el~~~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANKEsLV~aG~li~~~a~~~g~~llPVDSEHsAifQ~  151 (376)
T 3a06_A           72 KGSHSIEEMLEALKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELIPVDSEHSAIFQV  151 (376)
T ss_dssp             ESTTHHHHHHHHHCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCSHHHHHHHHHHHHHHHHHCCEEEECSHHHHHHHHH
T ss_pred             cCHHHHHHHhcCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeChHHHHhhHHHHHHHHHHcCCEEEEEccccCHHHHH
Confidence            89999999999889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHhhhhcCCCCCceEEE
Q 018600          235 IQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEII  314 (353)
Q Consensus       235 L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~Ievv  314 (353)
                      |+    ++|++|||||||||||+|++++|++|||+|||+||||+||+|||||||||||||||+||||||||+|||+|+||
T Consensus       152 L~----~~v~kiiLTASGGpFr~~~~~~l~~vt~~~Al~HPnW~MG~KITiDSATmmNKGlEvIEA~wLF~~~~~~I~vv  227 (376)
T 3a06_A          152 ME----PEVEKVVLTASGGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLEAMELFELPFEKIEVK  227 (376)
T ss_dssp             CC----SSCSEEEEEECCCTTSSSCHHHHTTCCGGGTCCCSSCCCCHHHHHHHHHTHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred             HH----hhhceEEEeccCCcccCCCHHHHhhCCHHHhccCCCCCCCCeEEecHHHHHHHHHHHHHHHHHcCCChheEEEE
Confidence            98    35999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCcceEEEEEecCCceeeee
Q 018600          315 IHPQSIIHSMVETQVLLYPVVM  336 (353)
Q Consensus       315 IHPqSiIHsmVef~DGs~~~~~  336 (353)
                      |||||||||||||.|||+.+.|
T Consensus       228 vHpqSiIHsmVef~DGsv~Aql  249 (376)
T 3a06_A          228 IHREGLVHGAVVLPDGNVKMVV  249 (376)
T ss_dssp             ECTTCCEEEEEECTTSCEEEEE
T ss_pred             ECCCCeEEEEEEEcCCcEEEEc
Confidence            9999999999999999999876

>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*

Probab=100.00  E-value=1.7e-94  Score=710.87  Aligned_cols=260  Identities=45%  Similarity=0.715  Sum_probs=245.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +|+||+|||||||||+|||++++++|++|+|+||++++|+++|.+|+++|+|++|++.|++.+.++++.+.+  .+++++
T Consensus         3 ~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~--~~~~v~   80 (388)
T 1r0k_A            3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAG--SSVEAA   80 (388)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTT--CSSEEE
T ss_pred             CceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhcc--CCcEEE
Confidence            468999999999999999999999999999999999999999999999999999999999999999988853  457899


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchhHHHHh
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC  234 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~  234 (353)
                      .|.++++++++.+ +|+||++|+|++|+.||++|+++||+|+|||||++|++|++++++|+++|++++||||||+|||||
T Consensus        81 ~g~~~~~el~~~~-iDvVV~ai~G~aGl~ptlaAi~aGK~VvlANKE~lv~~G~~l~~~A~~~gv~liPVDseh~Ai~q~  159 (388)
T 1r0k_A           81 AGADALVEAAMMG-ADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQC  159 (388)
T ss_dssp             ESHHHHHHHHTSC-CSEEEECCCSGGGHHHHHHHHHTTSEEEECCSHHHHTTHHHHHHHHHHHTCEEEECSHHHHHHHHH
T ss_pred             eCccHHHHHHcCC-CCEEEEeCCCHHHHHHHHHHHHCCCEEEEeCcHHHHhhHHHHHHHHHHcCCEEEEechhHHHHHHH
Confidence            9999999999988 999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHhhhhcCCCCCceEEE
Q 018600          235 IQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEII  314 (353)
Q Consensus       235 L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~Ievv  314 (353)
                      |.|.+..+|++|+|||||||||+|++++++++||+|||+||||+||+|||||||||||||||+||||||||+|+|+|++|
T Consensus       160 L~g~~i~~v~~IilTaSGGpfr~~~~~~l~~vt~~~Al~hp~W~mG~KitiDSAtm~NkglevIEa~~Lf~~~~~~I~vv  239 (388)
T 1r0k_A          160 FPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEIL  239 (388)
T ss_dssp             CCTTCGGGEEEEEEEECCCTTTTCCHHHHTTCCHHHHHC------CHHHHHHHHHTHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred             hhCCCccceeEEEEEeecccccCCCHHHHhcCCHHHhccCCCCCCcchhhhHHHHHHcCcCccccccccCCCCHHHeeee
Confidence            99987667999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCcceEEEEEecCCceeeeee
Q 018600          315 IHPQSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       315 IHPqSiIHsmVef~DGs~~~~~~  337 (353)
                      |||||||||||+|.|||+.+.|-
T Consensus       240 vhpqsiihsmV~f~dGsv~aql~  262 (388)
T 1r0k_A          240 VHPQSVIHSMVEYLDGSILAQIG  262 (388)
T ss_dssp             ECTTCCEEEEEEETTSCEEEEEC
T ss_pred             echhHeeEEEEEEcCCcEEEecC
Confidence            99999999999999999998763

>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*

Probab=98.92  E-value=4.3e-09  Score=105.59  Aligned_cols=153  Identities=18%  Similarity=0.241  Sum_probs=119.4

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-CCC-EEEEeCccchHHHHHHhhcCCCCc
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-KPQ-VVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF-kPk-~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      ..+.||+|+|+ |.||+..++.+.+.| .++|+|++ .+|.+...+.++++ .++ .+...  +...++.+++..  ..+
T Consensus        21 ~k~IRVGIIGa-G~iG~~~~~~l~~~~-~veLvAV~-D~~~era~~~a~~~yG~~~~~~~~--~~~~~i~~a~~~--g~~   93 (446)
T 3upl_A           21 GKPIRIGLIGA-GEMGTDIVTQVARMQ-GIEVGALS-ARRLPNTFKAIRTAYGDEENAREA--TTESAMTRAIEA--GKI   93 (446)
T ss_dssp             TCCEEEEEECC-SHHHHHHHHHHTTSS-SEEEEEEE-CSSTHHHHHHHHHHHSSSTTEEEC--SSHHHHHHHHHT--TCE
T ss_pred             CCceEEEEECC-hHHHHHHHHHHhhCC-CcEEEEEE-eCCHHHHHHHHHHhcCCccccccc--cchhhhhhhhcc--CCc
Confidence            34679999999 999999999998876 59999987 56788888888876 532 12222  123344443322  123


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEeccCc-cCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCc-hh
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIVGC-AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSE-HS  229 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIvG~-aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSE-Hs  229 (353)
                      .++   +...++++.+++|+|+.+.... .+...++.|+++||.|..+|||..+.-|+.+.++|+++|+.+.++|++ +.
T Consensus        94 ~v~---~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~~~gdqp~  170 (446)
T 3upl_A           94 AVT---DDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAGDEPS  170 (446)
T ss_dssp             EEE---SCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEECTTSHHH
T ss_pred             eEE---CCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeeecCCcchH
Confidence            343   3456677788999999998764 678999999999999999999998899999999999999999999998 77


Q ss_pred             HHHHhhc
Q 018600          230 AIFQCIQ  236 (353)
Q Consensus       230 AIfQ~L~  236 (353)
                      ++.+++.
T Consensus       171 ~~~eLv~  177 (446)
T 3upl_A          171 SCMELIE  177 (446)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7888886

>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}

Probab=98.82  E-value=1.2e-08  Score=97.92  Aligned_cols=138  Identities=19%  Similarity=0.182  Sum_probs=100.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC-----CCceEEEEEeecCC--------HHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEH-----EDKFRVVALAAGSN--------ITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~-----pd~F~VvaLaagsN--------v~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      +.||+|+| +|-||+..++.+.++     ..+++|+|++..+.        .+.+.+..+++.+                
T Consensus         4 ~irVgIiG-~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~----------------   66 (325)
T 3ing_A            4 EIRIILMG-TGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGR----------------   66 (325)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSC----------------
T ss_pred             eEEEEEEc-CcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCC----------------
Confidence            35899999 999999999999884     25799999876431        2222222222220                


Q ss_pred             HhhcCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccCc----HHHHHHHHcCCcEeeecccceeecccchhHHhhhcC
Q 018600          143 ALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGL----KPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHN  218 (353)
Q Consensus       143 ~l~~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL----~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~  218 (353)
                       +.    .. .+    ...+++..+++|+||.+.....+.    .-+..|+++||.|..+||+.+..-|+-+.++|++++
T Consensus        67 -~~----~~-~~----d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g  136 (325)
T 3ing_A           67 -IS----DR-AF----SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNS  136 (325)
T ss_dssp             -SC----SS-BC----CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHT
T ss_pred             -CC----cc-cC----CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcC
Confidence             00    00 01    124456678999999999877665    448899999999999999988888999999999999


Q ss_pred             CeEe---------ecCCchhHHHHhhcCCCCCCcceE
Q 018600          219 IKIL---------PADSEHSAIFQCIQGLPEGALRRI  246 (353)
Q Consensus       219 ~~Il---------PVDSEHsAIfQ~L~g~~~~~v~kI  246 (353)
                      +.++         |+-   +.|.++|.|.+   |.+|
T Consensus       137 ~~~~~Ea~vg~giPii---~~l~~~l~g~~---I~~i  167 (325)
T 3ing_A          137 KYIRYEATVAGGVPLF---SVLDYSILPSK---VKRF  167 (325)
T ss_dssp             CCEECGGGSSTTSCCH---HHHHHTCTTCC---EEEE
T ss_pred             CeEEEEeeecccCHHH---HHHHHHhhCCC---eeEE
Confidence            8875         886   78999998744   5554

>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}

Probab=98.75  E-value=1.4e-08  Score=97.36  Aligned_cols=169  Identities=17%  Similarity=0.318  Sum_probs=112.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-------CceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHE-------DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~p-------d~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      |.||+|+| +|.||+..++.+.+++       .+++|+|++..+ -+++.       +    + |  ..+.+......  
T Consensus         2 mirvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~-~~~~~-------~----i-d--~~~~~~~~~~~--   63 (327)
T 3do5_A            2 MIKIAIVG-FGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSK-SSISG-------D----F-S--LVEALRMKRET--   63 (327)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSS-CEEES-------S----C-C--HHHHHHHHHHH--
T ss_pred             cEEEEEEe-ccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCC-hHhcc-------c----c-C--HHHHHhhhccC--
Confidence            67899999 8999999999999874       569999987543 11110       0    0 0  00001100000  


Q ss_pred             CCcEEEecHHHHHHHhcCCCCcEEEEeccCcc----CcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe--
Q 018600          149 EKPEILAGEQGVIEAARHPDAVTVVTGIVGCA----GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL--  222 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~a----GL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il--  222 (353)
                        ..++. ...+.++++.+++|+|+.+..-..    +...+..|+++||.|..+||+.+..-++-+.++|+++++.++  
T Consensus        64 --~~~~~-~~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~e  140 (327)
T 3do5_A           64 --GMLRD-DAKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYE  140 (327)
T ss_dssp             --SSCSB-CCCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECG
T ss_pred             --ccccC-CCCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEE
Confidence              00110 124466666788999999995443    478899999999999999999998889999999999998765  


Q ss_pred             -------ecCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhh--hcCCHHHHhc
Q 018600          223 -------PADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKL--KEVKVADALK  273 (353)
Q Consensus       223 -------PVDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l--~~vT~~~ALk  273 (353)
                             |+   .+.+-++|.|.+...|+.|+   ||=  -+|-+.++  +..+.+|||+
T Consensus       141 a~v~~g~Pi---i~~l~~~l~~~~I~~I~GIl---nGT--~nyilt~m~~~g~~f~~~l~  192 (327)
T 3do5_A          141 ATVGGAMPV---VKLAKRYLALCEIESVKGIF---NGT--CNYILSRMEEERLPYEHILK  192 (327)
T ss_dssp             GGSSTTSCC---HHHHHTTTTTSCEEEEEEEC---CHH--HHHHHHHHHHHCCCHHHHHH
T ss_pred             EEeeecCHH---HHHHHHHhhCCCccEEEEEE---CCC--cCcchhhcCcCCcCHHHHHH
Confidence                   44   35667777664433444443   321  34455666  4788888776

>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}

Probab=98.65  E-value=2.9e-08  Score=99.37  Aligned_cols=157  Identities=22%  Similarity=0.310  Sum_probs=111.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhC--------CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEH--------EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~--------pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      .||+|+| +|.||+..++++.++        ..+++|++++. +|.++....+    +.                     
T Consensus        11 irIgIIG-~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d-~~~~~~~~~~----~~---------------------   63 (444)
T 3mtj_A           11 IHVGLLG-LGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAV-RNLDKAEALA----GG---------------------   63 (444)
T ss_dssp             EEEEEEC-CHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEEC-SCHHHHHHHH----TT---------------------
T ss_pred             ccEEEEC-CCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEE-CCHHHhhhhc----cc---------------------
Confidence            4899999 899999999998764        35789998764 4555432221    11                     


Q ss_pred             CCcEEEecHHHHHHHhcCCCCcEEEEeccC-ccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeE------
Q 018600          149 EKPEILAGEQGVIEAARHPDAVTVVTGIVG-CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKI------  221 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG-~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~I------  221 (353)
                        ..++   ..+.++++.+++|+|+.++.| -.....+.+|+++||.|..+||..+..-|.-+.++|+++|+.+      
T Consensus        64 --~~~~---~d~~ell~d~diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V  138 (444)
T 3mtj_A           64 --LPLT---TNPFDVVDDPEIDIVVELIGGLEPARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAV  138 (444)
T ss_dssp             --CCEE---SCTHHHHTCTTCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGS
T ss_pred             --Cccc---CCHHHHhcCCCCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEee
Confidence              1111   123556677899999999998 6788889999999999999999777777899999999999888      


Q ss_pred             ---eecCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhh--hcCCHHHHhc
Q 018600          222 ---LPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKL--KEVKVADALK  273 (353)
Q Consensus       222 ---lPVDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l--~~vT~~~ALk  273 (353)
                         +|+   ...+-++|.+.....|+.|+   ||--  +|-+.++  ++.+.+|||+
T Consensus       139 ~~giPi---i~~LrelL~~~~Ig~I~GIl---nGT~--nyilt~m~~~g~~f~~~l~  187 (444)
T 3mtj_A          139 AGGIPI---IKALREGLTANRIEWLAGII---NGTS--NFILSEMRDKGAAFDDVLK  187 (444)
T ss_dssp             STTSCH---HHHHHTTTTTSCEEEEEEEC---CHHH--HHHHHHHHHHCCCHHHHHH
T ss_pred             eCChHH---HHHHHHHHhCCCCceEEEEE---cCCc--ccccccCCCCCCCHHHHHH
Confidence               465   77777887775544455543   3211  2333445  3677777775

>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}

Probab=98.61  E-value=8.2e-07  Score=83.98  Aligned_cols=216  Identities=14%  Similarity=0.129  Sum_probs=139.7

Q ss_pred             CeeEEEEecCChHhHH-HH----HHHHhCCCceEEEE--------EeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQ-TL----DIVAEHEDKFRVVA--------LAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtq-TL----dVI~~~pd~F~Vva--------LaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      +.||+|+|++|++|+. -+    ..+++.++ +++++        ..+.+|.++..+.+++|....+             
T Consensus         6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~-~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~-------------   71 (383)
T 3oqb_A            6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGG-VRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARW-------------   71 (383)
T ss_dssp             EEEEEEESTTSTHHHHTTTTTTHHHHHHHTS-EECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCE-------------
T ss_pred             eeEEEEEeccchhhhhhhHHHHHHHHhhcCc-eeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcc-------------
Confidence            4589999999999996 66    77776653 33220        2445677777777777764211             


Q ss_pred             HhhcCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc--eeecccchhHHhhhcCCe
Q 018600          143 ALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIK  220 (353)
Q Consensus       143 ~l~~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES--LV~aG~li~~~a~~~~~~  220 (353)
                                 +   ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|. .+|=.  -+.-+.-+.++|++++..
T Consensus        72 -----------~---~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~~~~  136 (383)
T 3oqb_A           72 -----------T---TDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSKGVK  136 (383)
T ss_dssp             -----------E---SCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             -----------c---CCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHcCCe
Confidence                       1   123556667889999999888888888999999999976 77833  333456677889998875


Q ss_pred             Eeec-----CCchhHHHHhhcCCCCCCcceEEEEec----CCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceeccccc
Q 018600          221 ILPA-----DSEHSAIFQCIQGLPEGALRRIILTAS----GGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLF  291 (353)
Q Consensus       221 IlPV-----DSEHsAIfQ~L~g~~~~~v~kIiLTAS----GGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmm  291 (353)
                      +...     +..+.++-+.|......+|..+-.+-+    .|+++.              -..|+|..-+.  -..+.|+
T Consensus       137 ~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~~~~~~~~~~~~~~~--------------~~~~~w~~~~~--~ggG~l~  200 (383)
T 3oqb_A          137 HGTVQDKLFLPGLKKIAFLRDSGFFGRILSVRGEFGYWVFEGGWQE--------------AQRPSWNYRDE--DGGGIIL  200 (383)
T ss_dssp             EEECCGGGGSHHHHHHHHHHHTTTTSSEEEEEEEEECCCCCSSSSC--------------CSSCGGGGCTT--TTCCHHH
T ss_pred             EEEEeccccCHHHHHHHHHHHcCCCCCcEEEEEEeccccccccccc--------------cCCCCcccccc--cCCceee
Confidence            5332     334445555665544455665554432    122210              12467754222  2356788


Q ss_pred             chhHHHHH-hhhhcCCCCCceEEEEcC-----------------CcceEEEEEecCCceeeeee
Q 018600          292 NKGLEVIE-AHYLFGAEYDNIEIIIHP-----------------QSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       292 NKgLEvIE-A~~LF~i~~d~IevvIHP-----------------qSiIHsmVef~DGs~~~~~~  337 (353)
                      +-|.-.|. ++|||| +++.+......                 +-..+.+++|.||..-....
T Consensus       201 d~g~H~id~~~~l~G-~~~~v~a~~~~~~~~~~~~~g~~~~~~~~D~~~~~l~~~~G~~~~~~~  263 (383)
T 3oqb_A          201 DMVCHWRYVLDNLFG-NVQSVVCIGNTDIPERFDEQGKKYKATADDSAYATFQLEGGVIAHINM  263 (383)
T ss_dssp             HHHHHHHHHHHHHTC-CEEEEEEEEECSCSEEECTTSCEEECCSCCEEEEEEEETTTEEEEEEE
T ss_pred             ehhhHHHHHHHHHcC-CCeEEEEEEeecccccccCCCceeccccCCcEEEEEEeCCCCEEEEEE
Confidence            88876665 689999 77777766532                 24678899999997654443

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=98.60  E-value=2.8e-06  Score=79.18  Aligned_cols=208  Identities=13%  Similarity=0.117  Sum_probs=140.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|+ |.||+..+..++++|+ ++|+++ +.+|-+.+.+.+++|.++..                          
T Consensus         4 ~~rvgiiG~-G~~g~~~~~~l~~~~~-~~l~av-~d~~~~~~~~~a~~~g~~~~--------------------------   54 (344)
T 3euw_A            4 TLRIALFGA-GRIGHVHAANIAANPD-LELVVI-ADPFIEGAQRLAEANGAEAV--------------------------   54 (344)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCTT-EEEEEE-ECSSHHHHHHHHHTTTCEEE--------------------------
T ss_pred             ceEEEEECC-cHHHHHHHHHHHhCCC-cEEEEE-ECCCHHHHHHHHHHcCCcee--------------------------
Confidence            568999997 9999999999999875 999997 45678888888888763221                          


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce-eecccchhHHhhhcCCeEeec-----CCchh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILPA-----DSEHS  229 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL-V~aG~li~~~a~~~~~~IlPV-----DSEHs  229 (353)
                        ..+.++++.+++|.|+.+..-..-...+..|+++||.|.+-.-=++ +....-+.+++++++..+..-     +..+.
T Consensus        55 --~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~  132 (344)
T 3euw_A           55 --ASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFA  132 (344)
T ss_dssp             --SSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHH
T ss_pred             --CCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHH
Confidence              1234566667899999999999999999999999998775321011 122344667888887655432     45566


Q ss_pred             HHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCCC
Q 018600          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (353)
Q Consensus       230 AIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (353)
                      .+-++|......+|..+..+.. .|..  +..              .|     ..-..+.|++-|.-.|. ++|||| ++
T Consensus       133 ~~k~~i~~g~iG~i~~v~~~~~-~~~~--~~~--------------~~-----~~~~gG~l~d~g~H~ld~~~~l~G-~~  189 (344)
T 3euw_A          133 AINARVANQEIGNLEQLVIISR-DPAP--APK--------------DY-----IAGSGGIFRDMTIHDLDMARFFVP-NI  189 (344)
T ss_dssp             HHHHHHHTTTTSSEEEEEEEEE-CSSC--CCH--------------HH-----HHHSCHHHHHTHHHHHHHHHHHCS-CE
T ss_pred             HHHHHHhcCCCCceEEEEEEec-CCCC--CCc--------------cc-----ccCCCceeecchhhHHHHHHHhcC-Cc
Confidence            6777776655567777766532 2211  111              12     01234567777655555 579999 88


Q ss_pred             CceEEEEc----C-------CcceEEEEEecCCceeeeee
Q 018600          309 DNIEIIIH----P-------QSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       309 d~IevvIH----P-------qSiIHsmVef~DGs~~~~~~  337 (353)
                      +.+.....    |       .-..+.+++|.||..-....
T Consensus       190 ~~v~a~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~~  229 (344)
T 3euw_A          190 VEVTATGANVFSQEIAEFNDYDQVIVTLRGSKGELINIVN  229 (344)
T ss_dssp             EEEEEEEECSSCHHHHHTTCCSEEEEEEEETTSCEEEEEE
T ss_pred             EEEEEEecccccccccccCCCceEEEEEEECCCcEEEEEE
Confidence            88887652    2       23467889999997644433

>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*

Probab=98.58  E-value=6e-06  Score=77.15  Aligned_cols=205  Identities=16%  Similarity=0.184  Sum_probs=138.0

Q ss_pred             eeEEEEecCChHhHHHHHHHH-hCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .||+|+|+ |+||+.-+..++ ++| .++|+|++ .+|-+.+.+.+++|.....+.                        
T Consensus         3 ~rigiIG~-G~~g~~~~~~l~~~~~-~~~l~av~-d~~~~~~~~~~~~~g~~~~~~------------------------   55 (344)
T 3mz0_A            3 LRIGVIGT-GAIGKEHINRITNKLS-GAEIVAVT-DVNQEAAQKVVEQYQLNATVY------------------------   55 (344)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTCS-SEEEEEEE-CSSHHHHHHHHHHTTCCCEEE------------------------
T ss_pred             EEEEEECc-cHHHHHHHHHHHhhCC-CcEEEEEE-cCCHHHHHHHHHHhCCCCeee------------------------
Confidence            58999998 999999999998 555 59999974 668888888888887311111                        


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeeccc-c-eeecccchhHHhhhcCCeEeec------CCc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE-T-LIAGGPFVLPLAHKHNIKILPA------DSE  227 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKE-S-LV~aG~li~~~a~~~~~~IlPV------DSE  227 (353)
                        +.+.++++.+++|.|+.+..-..-...+.+|+++||.|.+- |= + =+....-+.++|++++..++=|      +..
T Consensus        56 --~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~E-KP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~  132 (344)
T 3mz0_A           56 --PNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCE-KPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSG  132 (344)
T ss_dssp             --SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEC-SCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHH
T ss_pred             --CCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCCcEEEc-CCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHH
Confidence              12345566678999999999999999999999999987652 21 1 1122344667888888776433      455


Q ss_pred             hhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCC-CCCCCCccceecccccchhHHHHH-hhhhcC
Q 018600          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHP-NWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (353)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHP-nW~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (353)
                      +..+-++++.....+|..+...-. .|..                  | .|. |      .+.|++-|.-.|. ++||||
T Consensus       133 ~~~~k~~i~~g~iG~i~~v~~~~~-~~~~------------------~~~w~-g------gg~l~d~g~H~id~~~~l~G  186 (344)
T 3mz0_A          133 YVQLKEALDNHVIGEPLMIHCAHR-NPTV------------------GDNYT-T------DMAVVDTLVHEIDVLHWLVN  186 (344)
T ss_dssp             HHHHHHHHHTTTTSSEEEEEEEEE-CSCC------------------CTTCC-T------THHHHTTTHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCCCcEEEEEEec-CCCC------------------Ccccc-C------CchhhhhhhHHHHHHHHhcC
Confidence            666667776555556665554321 2211                  2 365 2      3457777665555 579999


Q ss_pred             CCCCceEEEEcC---------CcceEEEEEecCCceeeeee
Q 018600          306 AEYDNIEIIIHP---------QSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       306 i~~d~IevvIHP---------qSiIHsmVef~DGs~~~~~~  337 (353)
                      -+++++......         .-..+.+++|.||..-....
T Consensus       187 ~~~~~V~a~~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~~  227 (344)
T 3mz0_A          187 DDYESVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEI  227 (344)
T ss_dssp             CCEEEEEEECCSCCTTSCTTCCCSEEEEEEETTCCEEEEEE
T ss_pred             CCcEEEEEEEeccccccCCCCCceEEEEEEECCCCEEEEEE
Confidence            767777665422         23467889999987644433

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=98.57  E-value=1e-05  Score=75.36  Aligned_cols=208  Identities=13%  Similarity=0.176  Sum_probs=136.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+| +|.||..-+..+++.|+ +++|+|++ .+|.+...+.+++|....++                        
T Consensus         2 ~~rigiiG-~G~ig~~~~~~l~~~~~~~~~l~av~-d~~~~~a~~~a~~~~~~~~~------------------------   55 (334)
T 3ohs_X            2 ALRWGIVS-VGLISSDFTAVLQTLPRSEHQVVAVA-ARDLSRAKEFAQKHDIPKAY------------------------   55 (334)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTSCTTTEEEEEEE-CSSHHHHHHHHHHHTCSCEE------------------------
T ss_pred             ccEEEEEC-chHHHHHHHHHHHhCCCCCeEEEEEE-cCCHHHHHHHHHHcCCCccc------------------------
Confidence            35899999 79999999999998886 69999975 56888888888888642221                        


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cCCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSE  227 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VDSE  227 (353)
                         ..+.+++..+++|.|+.+..-..-..-+.+|+++||.|.+- |=.-  +.-..-+.++|++++..+.-     -+..
T Consensus        56 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~GkhVl~E-KP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~  131 (334)
T 3ohs_X           56 ---GSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCE-KPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPA  131 (334)
T ss_dssp             ---SSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEE-SSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHH
T ss_pred             ---CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEE-CCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHH
Confidence               12355666778999999998888888999999999997642 2111  11234466788888876652     2344


Q ss_pred             hhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcC-
Q 018600          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG-  305 (353)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~-  305 (353)
                      +..+-+.|+.....+|..+-.+-+ -+..+.+  ..           -+|..|      .+.|++-|.-.|. ++|||| 
T Consensus       132 ~~~~k~~i~~g~iG~i~~v~~~~~-~~~~~~~--~~-----------~~~~~g------GG~l~d~g~H~id~~~~l~G~  191 (334)
T 3ohs_X          132 SEALRSVLAQGTLGDLRVARAEFG-KNLTHVP--RA-----------VDWAQA------GGALLDLGIYCVQFISMVFGG  191 (334)
T ss_dssp             HHHHHHHHHHTTTCSEEEEEEEEE-CCCTTCH--HH-----------HCTTTT------CSHHHHTHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHhcCCCCCeEEEEEEcc-CCCCCcC--cC-----------CCcccC------CCCHHHhhhHHHHHHHHHhCC
Confidence            455555665444456666655433 1211110  00           124444      3677777755555 688999 


Q ss_pred             CCCCceEEEEc--C---CcceEEEEEecCCcee
Q 018600          306 AEYDNIEIIIH--P---QSIIHSMVETQVLLYP  333 (353)
Q Consensus       306 i~~d~IevvIH--P---qSiIHsmVef~DGs~~  333 (353)
                      -+++++...-.  +   .-..+.+++|.||..-
T Consensus       192 ~~p~~v~a~~~~~~~~~~d~~~~~l~~~~G~~~  224 (334)
T 3ohs_X          192 QKPEKISVMGRRHETGVDDTVTVLLQYPGEVHG  224 (334)
T ss_dssp             CCCSEEEEEEEECTTSSEEEEEEEEEETTTEEE
T ss_pred             CCCeEEEEEEEECCCCcceEEEEEEEeCCCCEE
Confidence            66777776543  2   1256677888888653

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=98.53  E-value=8.7e-06  Score=76.36  Aligned_cols=216  Identities=13%  Similarity=0.170  Sum_probs=142.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .+.||+|+|. |.||..-+..++++++.++|++++ .+|-+.+.+.+++|..+  +.                       
T Consensus        12 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~-d~~~~~~~~~~~~~~~~--~~-----------------------   64 (354)
T 3q2i_A           12 RKIRFALVGC-GRIANNHFGALEKHADRAELIDVC-DIDPAALKAAVERTGAR--GH-----------------------   64 (354)
T ss_dssp             SCEEEEEECC-STTHHHHHHHHHHTTTTEEEEEEE-CSSHHHHHHHHHHHCCE--EE-----------------------
T ss_pred             CcceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEE-cCCHHHHHHHHHHcCCc--ee-----------------------
Confidence            4579999998 999999999999986689999975 56778887777777641  11                       


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce-eecccchhHHhhhcCCeEeec-----CCch
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILPA-----DSEH  228 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL-V~aG~li~~~a~~~~~~IlPV-----DSEH  228 (353)
                         ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+-.-=++ +..+.-+.+++++++..+...     +..+
T Consensus        65 ---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~  141 (354)
T 3q2i_A           65 ---ASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATL  141 (354)
T ss_dssp             ---SCHHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHH
T ss_pred             ---CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHH
Confidence               1224445556899999988877778888999999999875321111 223455677888888766422     2334


Q ss_pred             hHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCC
Q 018600          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (353)
Q Consensus       229 sAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (353)
                      ..+-+.++.....+|..+-.+..-.    .+..         -...++|..-.+-  +.+.|++-|--.|. ++|||| +
T Consensus       142 ~~~k~~i~~g~iG~i~~v~~~~~~~----~~~~---------~~~~~~w~~~~~~--~gG~l~d~g~H~ld~~~~l~G-~  205 (354)
T 3q2i_A          142 QLLKRAMQEKRFGRIYMVNVNVFWT----RPQE---------YYDAAGWRGTWEF--DGGAFMNQASHYVDLLDWLIG-P  205 (354)
T ss_dssp             HHHHHHHHTTTTCSEEEEEEEEECB----CCHH---------HHHTSTTTTCTTT--TCCCCCCCTHHHHHHHHHHHC-C
T ss_pred             HHHHHHHhcCCCCceEEEEEEEEEe----cCch---------hccccCccccccC--CCchhhhhhhHHHHHHHHhcC-C
Confidence            4555566554555666665544211    1111         1122345432222  26788888776666 489999 8


Q ss_pred             CCceEEEEcC-------CcceEEEEEecCCceeeee
Q 018600          308 YDNIEIIIHP-------QSIIHSMVETQVLLYPVVM  336 (353)
Q Consensus       308 ~d~IevvIHP-------qSiIHsmVef~DGs~~~~~  336 (353)
                      ++.+......       +-..+.+++|.||..-...
T Consensus       206 ~~~v~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~  241 (354)
T 3q2i_A          206 VESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMN  241 (354)
T ss_dssp             EEEEEEEEECSSSSSSSCSEEEEEEEETTSCEEEEE
T ss_pred             ceEEEEEeeccCCCCCccceeEEEEEECCCCEEEEE
Confidence            8888877642       2357889999999754433

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=98.47  E-value=6.1e-06  Score=76.98  Aligned_cols=211  Identities=12%  Similarity=0.111  Sum_probs=141.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|+ |.||..-+..++++| .++|+|++ .+|.+.+.+.+++|....+                        + 
T Consensus         5 ~~~igiiG~-G~~g~~~~~~l~~~~-~~~l~av~-d~~~~~~~~~~~~~~~~~~------------------------~-   56 (330)
T 3e9m_A            5 KIRYGIMST-AQIVPRFVAGLRESA-QAEVRGIA-SRRLENAQKMAKELAIPVA------------------------Y-   56 (330)
T ss_dssp             CEEEEECSC-CTTHHHHHHHHHHSS-SEEEEEEB-CSSSHHHHHHHHHTTCCCC------------------------B-
T ss_pred             eEEEEEECc-hHHHHHHHHHHHhCC-CcEEEEEE-eCCHHHHHHHHHHcCCCce------------------------e-
Confidence            468999997 999999999999986 49999975 4566777777777753211                        1 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce-eecccchhHHhhhcCCeEee-----cCCchh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL-V~aG~li~~~a~~~~~~IlP-----VDSEHs  229 (353)
                        +.+.+++..+++|.|+.+..-..-...+..|+++||.|.+-.-=++ +.-..-+.+++++++..+..     -+..+.
T Consensus        57 --~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~  134 (330)
T 3e9m_A           57 --GSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQ  134 (330)
T ss_dssp             --SSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHH
T ss_pred             --CCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHH
Confidence              1335566667899999999988888999999999999875321111 11234466788888876653     344556


Q ss_pred             HHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCCC
Q 018600          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (353)
Q Consensus       230 AIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (353)
                      .+-++++.....+|..+-.+-+. |+                -..+.|..-+..  ..+.|++-|.-.|. ++||||-++
T Consensus       135 ~~k~~i~~g~iG~i~~i~~~~~~-~~----------------~~~~~w~~~~~~--ggG~l~d~g~H~id~~~~l~G~~~  195 (330)
T 3e9m_A          135 KVKATIQEGGLGEILWVQSVTAY-PN----------------VDHIPWFYSREA--GGGALHGSGSYPLQYLQYVLGKEI  195 (330)
T ss_dssp             HHHHHHHTTTTCSEEEEEEEEEE-SC----------------CTTCGGGGCTTT--TCSHHHHHSHHHHHHHHHHHTCCE
T ss_pred             HHHHHHhCCCCCCeEEEEEEecc-cC----------------CCCcCcccCccc--CCCHHHHhhHHHHHHHHHHhCCCc
Confidence            66667765555667776666543 22                123456433222  35677777755554 679999877


Q ss_pred             CceEEEEcC-----CcceEEEEEecCCceeee
Q 018600          309 DNIEIIIHP-----QSIIHSMVETQVLLYPVV  335 (353)
Q Consensus       309 d~IevvIHP-----qSiIHsmVef~DGs~~~~  335 (353)
                      +++....+.     +-..+.+++|.||..-..
T Consensus       196 ~~v~a~~~~~~~~~~d~~~~~l~~~~G~~~~~  227 (330)
T 3e9m_A          196 QEVTGTATYQQGATDSQCNLALKFAEGTLGNI  227 (330)
T ss_dssp             EEEEEEEEECSSSCEEEEEEEEEETTTEEEEE
T ss_pred             eEEEEEEEeCCCCcceEEEEEEEECCCCEEEE
Confidence            777776532     234677888888865433

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=98.46  E-value=1.2e-05  Score=74.54  Aligned_cols=212  Identities=10%  Similarity=0.041  Sum_probs=134.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHH-hCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .+.||+|+|+ |.||...+..+. +.+ .++|+++. .+|-+.+.+.+++|....++ .                     
T Consensus         7 ~~~~v~iiG~-G~ig~~~~~~l~~~~~-~~~~vav~-d~~~~~~~~~a~~~g~~~~~-~---------------------   61 (346)
T 3cea_A            7 KPLRAAIIGL-GRLGERHARHLVNKIQ-GVKLVAAC-ALDSNQLEWAKNELGVETTY-T---------------------   61 (346)
T ss_dssp             CCEEEEEECC-STTHHHHHHHHHHTCS-SEEEEEEE-CSCHHHHHHHHHTTCCSEEE-S---------------------
T ss_pred             CcceEEEEcC-CHHHHHHHHHHHhcCC-CcEEEEEe-cCCHHHHHHHHHHhCCCccc-C---------------------
Confidence            4578999997 999999999888 665 59999875 56777777777777643221 1                     


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeec--ccchhHHhhhc-CCeEee-----cC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKH-NIKILP-----AD  225 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~a--G~li~~~a~~~-~~~IlP-----VD  225 (353)
                           .+.+++..+++|.|+.+..-..-..-...|+++||.|.+ .|-.-...  ..-+.++++++ +..+..     -+
T Consensus        62 -----~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~-eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~  135 (346)
T 3cea_A           62 -----NYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFC-EKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYD  135 (346)
T ss_dssp             -----CHHHHHTTSCCSEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTC
T ss_pred             -----CHHHHhcCCCCCEEEEeCChHhHHHHHHHHHHCCCEEEE-cCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccC
Confidence                 124455556899999998887788889999999998765 55322221  22356777888 877653     24


Q ss_pred             CchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhc
Q 018600          226 SEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLF  304 (353)
Q Consensus       226 SEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF  304 (353)
                      ..+..+-+++......+|..+-... .+|+.  +.....        ....|..|      .+.|++-|.-.|. ++|||
T Consensus       136 p~~~~~~~~i~~g~iG~i~~v~~~~-~~~~~--~~~~~~--------~~~~~~~~------gG~l~d~g~H~lD~~~~l~  198 (346)
T 3cea_A          136 DSYRYAKKIVDNGDIGKIIYMRGYG-IDPIS--GMESFT--------KFATEADS------GGIFVDMNIHDIDLIRWFT  198 (346)
T ss_dssp             HHHHHHHHHHHTTTTCSEEEEEEEE-EEEGG--GHHHHH--------HHHHHSCC------CCHHHHTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEEEEEEe-cCCCC--CChhHh--------hhcccCCC------CchHHHhhccHHHHHHHHc
Confidence            4566777777655556676665542 33331  111100        00012111      3467777766665 47999


Q ss_pred             CCCCCceEEEEc----C-------CcceEEEEEecCCceee
Q 018600          305 GAEYDNIEIIIH----P-------QSIIHSMVETQVLLYPV  334 (353)
Q Consensus       305 ~i~~d~IevvIH----P-------qSiIHsmVef~DGs~~~  334 (353)
                      |-+++++.....    |       .-..+.+++|.||..-.
T Consensus       199 G~~~~~V~a~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~~~  239 (346)
T 3cea_A          199 GQDPVQAYGLTSNIAAPQLADIGEFETGVAQLKMSDGVIAT  239 (346)
T ss_dssp             SCCEEEEEEEEECSSCGGGGGGTCCSEEEEEEEETTSCEEE
T ss_pred             CCCCeEEEEEEeeccCccccccCCceeEEEEEEECCCcEEE
Confidence            977777766543    2       12467888998886543

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=98.46  E-value=1.2e-05  Score=74.48  Aligned_cols=207  Identities=16%  Similarity=0.143  Sum_probs=137.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|+ |.||+.-+..+.++|+ ++|++++ .+|-+.+.+.+++|..+   .                        
T Consensus         3 ~~~vgiiG~-G~~g~~~~~~l~~~~~-~~l~av~-d~~~~~~~~~~~~~~~~---~------------------------   52 (331)
T 4hkt_A            3 TVRFGLLGA-GRIGKVHAKAVSGNAD-ARLVAVA-DAFPAAAEAIAGAYGCE---V------------------------   52 (331)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCTT-EEEEEEE-CSSHHHHHHHHHHTTCE---E------------------------
T ss_pred             ceEEEEECC-CHHHHHHHHHHhhCCC-cEEEEEE-CCCHHHHHHHHHHhCCC---c------------------------
Confidence            468999997 9999999999998864 9999974 56778777777777543   1                        


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc-eeecccchhHHhhhcCCeEee-----cCCchh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET-LIAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES-LV~aG~li~~~a~~~~~~IlP-----VDSEHs  229 (353)
                        ..+.++++.+++|.|+.+..-..-...+..|+++||.|.+-.-=+ =..-..-+.+++++++..+..     -+..+.
T Consensus        53 --~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~  130 (331)
T 4hkt_A           53 --RTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFM  130 (331)
T ss_dssp             --CCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHH
T ss_pred             --CCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHH
Confidence              123455666789999999999888999999999999877522100 011233456788888876653     244555


Q ss_pred             HHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCCC
Q 018600          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (353)
Q Consensus       230 AIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (353)
                      .+-++|......+|..+..+.. .|.. .+.. .             |..      ..+.|++-|.-.|. ++||||-++
T Consensus       131 ~~~~~i~~g~iG~i~~~~~~~~-~~~~-~~~~-~-------------~~~------~gG~l~d~g~H~ld~~~~l~G~~~  188 (331)
T 4hkt_A          131 AVRKAIDDGRIGEVEMVTITSR-DPSA-PPVD-Y-------------IKR------SGGIFRDMTIHDFDMARFLLGEEP  188 (331)
T ss_dssp             HHHHHHHTTTTCSEEEEEEEEE-CSSC-CCHH-H-------------HHT------TTCHHHHTHHHHHHHHHHHHCSCE
T ss_pred             HHHHHHHcCCCCceEEEEEEec-CCCC-Cchh-h-------------hhc------CCCeeehheehHHHHHHHHhCCCc
Confidence            6666676555566777666542 2321 1111 1             011      23567777766655 579999777


Q ss_pred             CceEEEEcC-----------CcceEEEEEecCCceeeee
Q 018600          309 DNIEIIIHP-----------QSIIHSMVETQVLLYPVVM  336 (353)
Q Consensus       309 d~IevvIHP-----------qSiIHsmVef~DGs~~~~~  336 (353)
                      +++......           .-..+.+++|.||..-...
T Consensus       189 ~~v~a~~~~~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~  227 (331)
T 4hkt_A          189 VSVTATAAVLIDKAIGDAGDYDSVSVILQTASGKQAIIS  227 (331)
T ss_dssp             EEEEEEEECCSCHHHHHTTCCSEEEEEEEETTCCEEEEE
T ss_pred             cEEEEEeccccccccccCCCcceEEEEEEECCCCEEEEE
Confidence            777776432           2346788999998754433

>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A

Probab=98.40  E-value=1.8e-05  Score=77.25  Aligned_cols=215  Identities=12%  Similarity=0.118  Sum_probs=145.0

Q ss_pred             CeeEEEEec---CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGS---TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGS---TGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      +.||+|+|+   +|.+|..-+..+++++++++|+|++ .+|.+.+.+.+++|....+                      +
T Consensus        20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~-d~~~~~~~~~a~~~g~~~~----------------------~   76 (438)
T 3btv_A           20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALY-SPKIETSIATIQRLKLSNA----------------------T   76 (438)
T ss_dssp             CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEE-CSSHHHHHHHHHHTTCTTC----------------------E
T ss_pred             CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEE-eCCHHHHHHHHHHcCCCcc----------------------e
Confidence            468999999   6999999999999985579999974 5678888777887764210                      1


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC------CcEeeecccce--eecccchhHHhhhcCCeEeec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG------KDIALANKETL--IAGGPFVLPLAHKHNIKILPA  224 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g------K~IaLANKESL--V~aG~li~~~a~~~~~~IlPV  224 (353)
                      ++.   .+.++++.+++|.|+.+..-..-..-+.+|+++|      |.|.+ -|-.-  +.-..-+.++|++++..+..-
T Consensus        77 ~~~---~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~-EKP~a~~~~e~~~l~~~a~~~g~~~~v~  152 (438)
T 3btv_A           77 AFP---TLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFV-EWALACSLDQAESIYKAAAERGVQTIIS  152 (438)
T ss_dssp             EES---SHHHHHHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEE-ESSCCSSHHHHHHHHHHHHTTTCEEEEE
T ss_pred             eeC---CHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEe-cCcccCCHHHHHHHHHHHHHcCCeEEEe
Confidence            111   2355666678999999988888888899999999      88765 24211  122345677888888776643


Q ss_pred             -----CCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH
Q 018600          225 -----DSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE  299 (353)
Q Consensus       225 -----DSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE  299 (353)
                           +..+..+-+.|+......|..+-.+..++.++....           ...++|..-+.  -..+.|++-|--.|.
T Consensus       153 ~~~R~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~~~~~~~~-----------~~~~~w~~~~~--~gGG~l~d~g~H~lD  219 (438)
T 3btv_A          153 LQGRKSPYILRAKELISQGYIGDINSIEIAGNGGWYGYERP-----------VKSPKYIYEIG--NGVDLVTTTFGHTID  219 (438)
T ss_dssp             CGGGGCHHHHHHHHHHHTTTTCSEEEEEEEEECSSSSSEEE-----------TTSCGGGGSTT--SSCSTTTTHHHHHHH
T ss_pred             cccccCHHHHHHHHHHHcCCCCCcEEEEEEEccCccccccc-----------CCccccccccc--cCCCeeeeeeeeHHH
Confidence                 456667777777655667777776655433332110           12456753222  223567888866665


Q ss_pred             -hhhhcCCCCCceEEEEc---CC--------------------cceEEEEEecCC
Q 018600          300 -AHYLFGAEYDNIEIIIH---PQ--------------------SIIHSMVETQVL  330 (353)
Q Consensus       300 -A~~LF~i~~d~IevvIH---Pq--------------------SiIHsmVef~DG  330 (353)
                       ++||||-+++.+.....   |+                    -..+.+++|.+|
T Consensus       220 l~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~~~g~~~~~~~~D~~~~~l~~~~G  274 (438)
T 3btv_A          220 ILQYMTSSYFSRINAMVFNNIPEQELIDERGNRLGQRVPKTVPDHLLFQGTLLNG  274 (438)
T ss_dssp             HHHHHHTCCEEEEEEEEECCCSEEEEECTTSCEEEEEEECCSCSEEEEEEEETTT
T ss_pred             HHHHHhCCCceEEEEEeeccCCccccccccccccccccCCCCCceEEEEEEECCC
Confidence             58999977777776653   22                    245677888888

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=98.39  E-value=2.3e-05  Score=74.21  Aligned_cols=206  Identities=16%  Similarity=0.164  Sum_probs=136.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHH-hCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+|. |.||+.-+..+. +.| .++|+|+. ..|-+.+.+.+++|....-                       ++
T Consensus        23 ~~rvgiIG~-G~~g~~~~~~l~~~~~-~~~lvav~-d~~~~~~~~~a~~~g~~~~-----------------------~~   76 (357)
T 3ec7_A           23 TLKAGIVGI-GMIGSDHLRRLANTVS-GVEVVAVC-DIVAGRAQAALDKYAIEAK-----------------------DY   76 (357)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHTCT-TEEEEEEE-CSSTTHHHHHHHHHTCCCE-----------------------EE
T ss_pred             eeeEEEECC-cHHHHHHHHHHHhhCC-CcEEEEEE-eCCHHHHHHHHHHhCCCCe-----------------------ee
Confidence            468999997 999999999998 554 59999975 4566777777777763111                       11


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEeec------CC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA------DS  226 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlPV------DS  226 (353)
                         +.+.+++..+++|.|+.+..-..-...+.+|+++||.|.+- |=.-  +.-..-+.++|+++|..++=|      +.
T Consensus        77 ---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~E-KPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p  152 (357)
T 3ec7_A           77 ---NDYHDLINDKDVEVVIITASNEAHADVAVAALNANKYVFCE-KPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDK  152 (357)
T ss_dssp             ---SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE-SSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSH
T ss_pred             ---CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEee-cCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCH
Confidence               12345566678999999998888889999999999987642 2111  112344667888888776433      44


Q ss_pred             chhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCC-CCCCCCccceecccccchhHHHHH-hhhhc
Q 018600          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHP-NWSMGKKITVDSATLFNKGLEVIE-AHYLF  304 (353)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHP-nW~MG~KITIDSATmmNKgLEvIE-A~~LF  304 (353)
                      .+..+-+++......+|..+..+. ..|..                  | .|. |      .+.|++-|.-.|. ++|||
T Consensus       153 ~~~~~k~~i~~g~iG~i~~v~~~~-~~~~~------------------p~~w~-g------gg~l~d~g~H~iDl~~~l~  206 (357)
T 3ec7_A          153 GYVQLKNIIDSGEIGQPLMVHGRH-YNAST------------------VPEYK-T------PQAIYETLIHEIDVMHWLL  206 (357)
T ss_dssp             HHHHHHHHHHHTTTCSEEEEEEEE-ECSCC------------------CTTCC-T------THHHHTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCeEEEEEEE-eCCCC------------------Ccccc-C------CchhhhcccHHHHHHHHHc
Confidence            555666666544445565554432 22221                  2 465 2      3457888766665 57999


Q ss_pred             CCCCCceEEEEcC--------CcceEEEEEecCCceeeeee
Q 018600          305 GAEYDNIEIIIHP--------QSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       305 ~i~~d~IevvIHP--------qSiIHsmVef~DGs~~~~~~  337 (353)
                      |-+++.+.+....        .-....+++|.||..-....
T Consensus       207 G~~~~~V~a~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~~  247 (357)
T 3ec7_A          207 NEDYKTVKVYFPRQSSLVTTLRDPQLVVMETTSGINIVVEV  247 (357)
T ss_dssp             TCCEEEEEEECCSCCTTCCSSCCSEEEEEEETTCCEEEEEE
T ss_pred             CCCceEEEEEEecccccCCCcceeEEEEEEECCCCEEEEEE
Confidence            9877777766433        23567889999987654443

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=98.37  E-value=1.9e-05  Score=74.23  Aligned_cols=205  Identities=16%  Similarity=0.184  Sum_probs=134.4

Q ss_pred             CeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-CCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-PQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk-Pk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      +.||+|+|. |.||+ ..+..++++| +++|+|++..+..+.++   ++|. |.                       +++
T Consensus         2 ~~rvgiiG~-G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~a---~~~~~~~-----------------------~~~   53 (349)
T 3i23_A            2 TVKMGFIGF-GKSANRYHLPYVMIRE-TLEVKTIFDLHVNEKAA---APFKEKG-----------------------VNF   53 (349)
T ss_dssp             CEEEEEECC-SHHHHHTTHHHHTTCT-TEEEEEEECTTCCHHHH---HHHHTTT-----------------------CEE
T ss_pred             eeEEEEEcc-CHHHHHHHHHHHhhCC-CeEEEEEECCCHHHHHH---HhhCCCC-----------------------CeE
Confidence            358999997 99998 6888888865 59999998765223332   2221 11                       222


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cCC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADS  226 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VDS  226 (353)
                      +.   .+.+++..+++|.|+.+..-..-..-+..|+++||.|.+ .|=.-  +.-..-+.++|+++|..+..     -+.
T Consensus        54 ~~---~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~-EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p  129 (349)
T 3i23_A           54 TA---DLNELLTDPEIELITICTPAHTHYDLAKQAILAGKSVIV-EKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDG  129 (349)
T ss_dssp             ES---CTHHHHSCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCH
T ss_pred             EC---CHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHcCCEEEE-ECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCH
Confidence            21   235566778899999998888888889999999999876 44422  22244467788888877653     234


Q ss_pred             chhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcC
Q 018600          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (353)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (353)
                      .+..+-+++......+|..+-.  .-+.++.           .     ++|..-.   -..+.|++-|.-.|. ++||||
T Consensus       130 ~~~~~~~~i~~g~iG~i~~~~~--~~~~~~~-----------~-----~~w~~~~---~ggG~l~d~g~H~id~~~~l~G  188 (349)
T 3i23_A          130 DYLAMKQVVEQGFLGEINEVET--HIDYYRP-----------G-----SITEQGP---KENGSFYGLGIHLMDRMIALFG  188 (349)
T ss_dssp             HHHHHHHHHHHTTTCSEEEEEE--ECCCBCT-----------T-----SCCSCCC---GGGSHHHHTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCCEEEEEE--EecccCC-----------c-----hhhcccC---CCCCeehhhhhHHHHHHHHHhC
Confidence            4455556665434445555443  3222221           1     5687544   457788898877776 579999


Q ss_pred             CCCCceEEEEcC-------CcceEEEEEecCCceee
Q 018600          306 AEYDNIEIIIHP-------QSIIHSMVETQVLLYPV  334 (353)
Q Consensus       306 i~~d~IevvIHP-------qSiIHsmVef~DGs~~~  334 (353)
                       +++.+......       .-..+.+++|.||..-.
T Consensus       189 -~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~  223 (349)
T 3i23_A          189 -RPDQVTYDIRNNEVSEAVDNYFDVDLHYGSKLKVK  223 (349)
T ss_dssp             -CCSEEEECEECSSSTTSCCCEEEEEEEETTTEEEE
T ss_pred             -CCeEEEEEEEeeCCCCCcceEEEEEEEeCCCcEEE
Confidence             78888775432       34678889999985433

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=98.32  E-value=8e-06  Score=76.36  Aligned_cols=207  Identities=14%  Similarity=0.151  Sum_probs=136.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +|.||+|+|+.|+||..-+..+++.  ..+|+|++-. |-+. .+ +.+..|                       .++++
T Consensus         2 ~mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~-~~~~-~~-~~~~~~-----------------------~~~~~   53 (312)
T 3o9z_A            2 HMTRFALTGLAGYIAPRHLKAIKEV--GGVLVASLDP-ATNV-GL-VDSFFP-----------------------EAEFF   53 (312)
T ss_dssp             -CCEEEEECTTSSSHHHHHHHHHHT--TCEEEEEECS-SCCC-GG-GGGTCT-----------------------TCEEE
T ss_pred             CceEEEEECCChHHHHHHHHHHHhC--CCEEEEEEcC-CHHH-HH-HHhhCC-----------------------CCcee
Confidence            4789999999999999999999986  4799997643 3222 11 111112                       13344


Q ss_pred             ecHHHHHHHh-----cCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee----
Q 018600          155 AGEQGVIEAA-----RHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP----  223 (353)
Q Consensus       155 ~G~~gl~~~a-----~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP----  223 (353)
                      ...+.+.+++     ..+++|.|+.+..-..=..-+.+|+++||.|.+ -|=.-  +.-..-+.++|+++|..+..    
T Consensus        54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~  132 (312)
T 3o9z_A           54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGANALS-EKPLVLWPEEIARLKELEARTGRRVYTVLQL  132 (312)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTCEEEE-CSSSCSCHHHHHHHHHHHHHHCCCEEECCGG
T ss_pred             CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCCCeEEE-ECCCCCCHHHHHHHHHHHHHcCCEEEEEeeh
Confidence            4444444332     567899999999988888889999999999874 23211  22344567788888876643    


Q ss_pred             -cCCchhHHHHhhcCCCCCCcceEEEEe--cCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHh
Q 018600          224 -ADSEHSAIFQCIQGLPEGALRRIILTA--SGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA  300 (353)
Q Consensus       224 -VDSEHsAIfQ~L~g~~~~~v~kIiLTA--SGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA  300 (353)
                       -+..+.++-+.++..  .+|..+-.+-  +.|+++                 .++|..-+..  ..+.|+|-|.-.|..
T Consensus       133 R~~p~~~~~k~~i~~g--G~i~~v~~~~~~~~~~~~-----------------~~~w~~~~~~--~gG~l~d~g~H~id~  191 (312)
T 3o9z_A          133 RVHPSLLALKERLGQE--KGAKDVVLTYVTGRGKWY-----------------GKSWKVDEAK--SGGLATNIGIHFFDL  191 (312)
T ss_dssp             GGCHHHHHHHHHHHTC--CSCEEEEEEEEECCCTTG-----------------GGSGGGCHHH--HCCHHHHTTHHHHHH
T ss_pred             hcCHHHHHHHHHHHcC--CCEEEEEEEEEccCCCcc-----------------ccccccCccc--CCCeeeecccCHHHH
Confidence             344455555666543  4566554443  222211                 2456543322  357899998877775


Q ss_pred             -hhhcCCCCCceEEEEcCCcceEEEEEecCCce
Q 018600          301 -HYLFGAEYDNIEIIIHPQSIIHSMVETQVLLY  332 (353)
Q Consensus       301 -~~LF~i~~d~IevvIHPqSiIHsmVef~DGs~  332 (353)
                       +|||| +++.+.+-+..+...+.+++|.+|..
T Consensus       192 ~~~l~G-~~~~v~~~~~~~d~~~~~l~~~~g~v  223 (312)
T 3o9z_A          192 LAWLFG-RALHVEVHARTPTVNAGYLELEGARV  223 (312)
T ss_dssp             HHHHHC-CEEEEEEEEECSSEEEEEEEETTEEE
T ss_pred             HHHHhC-CCeEEEEEecCCceEEEEEEECCCcE
Confidence             89999 56777788888889999999999875

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=98.32  E-value=5.6e-05  Score=70.93  Aligned_cols=216  Identities=12%  Similarity=0.071  Sum_probs=142.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .+.||+|+|+-+.+|..-+..+++.+++++|+|++ ..|.+.+.+.+++|....                        ++
T Consensus        17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~-d~~~~~~~~~a~~~~~~~------------------------~~   71 (340)
T 1zh8_A           17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVT-SRTRSHAEEFAKMVGNPA------------------------VF   71 (340)
T ss_dssp             CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEE-CSSHHHHHHHHHHHSSCE------------------------EE
T ss_pred             CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEE-cCCHHHHHHHHHHhCCCc------------------------cc
Confidence            35689999964389999999999886679999975 567888887788776311                        11


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cCCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSE  227 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VDSE  227 (353)
                         ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+ -|=.-  +.-..-+.++|+++|..+..     -+..
T Consensus        72 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~  147 (340)
T 1zh8_A           72 ---DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVIC-EKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPA  147 (340)
T ss_dssp             ---SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEE-ESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHH
T ss_pred             ---CCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHH
Confidence               1234555667899999999888888889999999998866 24221  11233466788888876653     2555


Q ss_pred             hhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCC
Q 018600          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGA  306 (353)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i  306 (353)
                      +..+-++|+.....+|..+-.+. ++|++....           ...++|..-++-  ..+.|++-|.-.|. ++|||| 
T Consensus       148 ~~~~k~~i~~g~iG~i~~v~~~~-~~~~~~~~~-----------~~~~~w~~~~~~--~GG~l~d~g~H~ld~~~~l~G-  212 (340)
T 1zh8_A          148 FWKAKELVESGAIGDPVFMNWQI-WVGMDENNK-----------YVHTDWRKKPKH--VGGFLSDGGVHHAAAMRLILG-  212 (340)
T ss_dssp             HHHHHHHHHTTTTSSEEEEEEEE-EBCCCTTCS-----------GGGCHHHHTTCS--TTTHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHhcCCCCCcEEEEEEE-eccccccCC-----------CCCcCceECCcC--CCceeeeccHHHHHHHHHhhC-
Confidence            66666777655555676665554 345543211           112345322221  23567777665555 579999 


Q ss_pred             CCCceEEEEcC-------CcceEEEEEecCCceee
Q 018600          307 EYDNIEIIIHP-------QSIIHSMVETQVLLYPV  334 (353)
Q Consensus       307 ~~d~IevvIHP-------qSiIHsmVef~DGs~~~  334 (353)
                      +++.+......       .-..+.+++|.||..-.
T Consensus       213 ~~~~V~a~~~~~~~~~~~~D~~~~~l~~~~G~~~~  247 (340)
T 1zh8_A          213 EIEWISAVAKDLSPLLGGMDFLSSIFEFENGTVGN  247 (340)
T ss_dssp             CEEEEEEEEECCCTTSSSCCEEEEEEEETTSCEEE
T ss_pred             CCeEEEEEEEccCCCCCCcceEEEEEEeCCCCEEE
Confidence            77777776542       34567888999987543

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=98.31  E-value=3.7e-05  Score=70.83  Aligned_cols=206  Identities=14%  Similarity=0.134  Sum_probs=136.4

Q ss_pred             eEEEEecCChHhHHH-HHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           78 PISVLGSTGSIGTQT-LDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        78 ~I~ILGSTGSIGtqT-LdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      ||+|+|+ |.||+.. +..+.+ + .++|++++ .+|-+.+.+.+++|....                        ++  
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~-~-~~~~vav~-d~~~~~~~~~~~~~g~~~------------------------~~--   51 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRA-T-GGEVVSMM-STSAERGAAYATENGIGK------------------------SV--   51 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHH-T-TCEEEEEE-CSCHHHHHHHHHHTTCSC------------------------CB--
T ss_pred             eEEEEcc-cHHHHHhhhHHhhc-C-CCeEEEEE-CCCHHHHHHHHHHcCCCc------------------------cc--
Confidence            6999996 9999997 777777 4 59999875 567777777777665321                        01  


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cCCchh
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VDSEHs  229 (353)
                       ..+.++++.+++|+|+.+..-..-..-...|+++||.|.+ .|-.-  ..-..-+.++|++++..+..     -+..+.
T Consensus        52 -~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~-ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~  129 (332)
T 2glx_A           52 -TSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLC-EKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHR  129 (332)
T ss_dssp             -SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHH
T ss_pred             -CCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEE-eCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHH
Confidence             1234556666899999998877777888899999998865 44221  11234467788888877654     345566


Q ss_pred             HHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCCC
Q 018600          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (353)
Q Consensus       230 AIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (353)
                      .+-++|......+|..+-.+-+..+    +            -..++|..-++- -..+.|++-|--.|. ++||||-++
T Consensus       130 ~~~~~i~~g~iG~i~~v~~~~~~~~----~------------~~~~~w~~~~~~-~ggG~l~d~g~H~id~~~~l~G~~~  192 (332)
T 2glx_A          130 AMRDAIAEGRIGRPIAARVFHAVYL----P------------PHLQGWRLERPE-AGGGVILDITVHDADTLRFVLNDDP  192 (332)
T ss_dssp             HHHHHHHTTTTSSEEEEEEEEECBC----C------------GGGTTGGGSCTT-TTCSHHHHTHHHHHHHHHHHHTSCE
T ss_pred             HHHHHHHcCCCCCeEEEEEEEcccC----C------------CCCCCcccccCC-CCCchHhhhhHHHHHHHHHHcCCCC
Confidence            6777776555567777766655332    1            123456432111 124567777766665 579999877


Q ss_pred             CceEEEEcC--------CcceEEEEEecCCce
Q 018600          309 DNIEIIIHP--------QSIIHSMVETQVLLY  332 (353)
Q Consensus       309 d~IevvIHP--------qSiIHsmVef~DGs~  332 (353)
                      .++......        .-..+.+++|.||..
T Consensus       193 ~~V~a~~~~~~~~~~~~~d~~~~~l~~~~G~~  224 (332)
T 2glx_A          193 AEAVAISHSAGMGKEGVEDGVMGVLRFQSGVI  224 (332)
T ss_dssp             EEEEEEEECCSSSCTTCCSEEEEEEEETTSCE
T ss_pred             cEEEEEEecCCCCCCCccceEEEEEEECCCcE
Confidence            788776432        235788899999865

>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A

Probab=98.30  E-value=5.2e-05  Score=75.41  Aligned_cols=201  Identities=11%  Similarity=0.167  Sum_probs=134.6

Q ss_pred             CeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      +.||+|+|.+   |.+|..-+..+++.++.++|+|++ .+|-+.+.+.+++|...-                      ++
T Consensus        39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~-d~~~~~a~~~a~~~g~~~----------------------~~   95 (479)
T 2nvw_A           39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALY-NPTLKSSLQTIEQLQLKH----------------------AT   95 (479)
T ss_dssp             CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEE-CSCHHHHHHHHHHTTCTT----------------------CE
T ss_pred             cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEE-eCCHHHHHHHHHHcCCCc----------------------ce
Confidence            4689999995   999999999999885579999965 567888887788776421                      01


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC------CcEeeecccce--eecccchhHHhhhcC-CeEee
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG------KDIALANKETL--IAGGPFVLPLAHKHN-IKILP  223 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g------K~IaLANKESL--V~aG~li~~~a~~~~-~~IlP  223 (353)
                      ++.   .+.++++.+++|.|+.+..-..-...+.+|+++|      |.|.+ .|=.-  +.-..-+.++|++++ ..+..
T Consensus        96 ~~~---d~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~-EKPla~~~~ea~~l~~~a~~~g~~~~~v  171 (479)
T 2nvw_A           96 GFD---SLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYV-EWALAASVQQAEELYSISQQRANLQTII  171 (479)
T ss_dssp             EES---CHHHHHHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEE-ESSSSSSHHHHHHHHHHHHTCTTCEEEE
T ss_pred             eeC---CHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEE-eCCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence            111   2345566678999999998888888899999999      88765 56321  222345677888888 66543


Q ss_pred             -----cCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHH
Q 018600          224 -----ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVI  298 (353)
Q Consensus       224 -----VDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvI  298 (353)
                           -+..+..+-++|+.....+|..+-.+..++.++...        +   ..+++|..-+.  -..+.|++-|--.|
T Consensus       172 ~~~~R~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~~~~~~~--------~---~~~~~w~~~~~--~gGG~l~d~g~H~l  238 (479)
T 2nvw_A          172 CLQGRKSPYIVRAKELISEGCIGDINSIEISGNGGWYGYER--------P---MRSPEYLYDIE--SGVNLISNSFGHTI  238 (479)
T ss_dssp             ECGGGGCHHHHHHHHHHHTTTTCSEEEEEEEEECSBSSSEE--------E---TTCCGGGGCGG--GSCSTTTTHHHHHH
T ss_pred             EeccccCHHHHHHHHHHHcCCCCCeEEEEEEecCCccCCcc--------c---ccccccccCcc--cCccHHHHHHHHHH
Confidence                 244556666677655556777777665543332211        0   12456754322  12356888877766


Q ss_pred             H-hhhhcCCCCCceEEEEc
Q 018600          299 E-AHYLFGAEYDNIEIIIH  316 (353)
Q Consensus       299 E-A~~LF~i~~d~IevvIH  316 (353)
                      . ++||||-+++.+.....
T Consensus       239 Dl~~~l~G~~p~~V~a~~~  257 (479)
T 2nvw_A          239 DVLQYITGSYFQKINAMIS  257 (479)
T ss_dssp             HHHHHHHTCCEEEEEEEEE
T ss_pred             HHHHHHHCCCCCEEEEEEE
Confidence            6 57999977777766653

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=98.28  E-value=9.9e-05  Score=69.64  Aligned_cols=208  Identities=15%  Similarity=0.200  Sum_probs=137.2

Q ss_pred             CCeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .+.||+|+|+ |.||. ..+..+++.| .++|+|++ .+|-+...+.+++|..+.+                        
T Consensus        26 ~~~rigiIG~-G~~g~~~~~~~l~~~~-~~~l~av~-d~~~~~~~~~a~~~g~~~~------------------------   78 (350)
T 3rc1_A           26 NPIRVGVIGC-ADIAWRRALPALEAEP-LTEVTAIA-SRRWDRAKRFTERFGGEPV------------------------   78 (350)
T ss_dssp             CCEEEEEESC-CHHHHHTHHHHHHHCT-TEEEEEEE-ESSHHHHHHHHHHHCSEEE------------------------
T ss_pred             CceEEEEEcC-cHHHHHHHHHHHHhCC-CeEEEEEE-cCCHHHHHHHHHHcCCCCc------------------------
Confidence            3568999995 99998 7889998876 49999975 4677887777777754321                        


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cCC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADS  226 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VDS  226 (353)
                          +.+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+ -|=.-  +.-..-+.++|+++|..+..     -+.
T Consensus        79 ----~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~-EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p  153 (350)
T 3rc1_A           79 ----EGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLA-EKPLTTDRPQAERLFAVARERGLLLMENFMFLHHP  153 (350)
T ss_dssp             ----ESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEE-ESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCT
T ss_pred             ----CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCH
Confidence                2335566677899999999888888999999999998653 22211  11234456788888876653     355


Q ss_pred             chhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcC
Q 018600          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (353)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (353)
                      .+..+-++|......+|..+-.+-+..+ +  +              .++|..=+.  ...+.|++-|.-.|. +.||||
T Consensus       154 ~~~~~k~~i~~G~iG~i~~v~~~~~~~~-~--~--------------~~~wr~~~~--~gGG~l~d~g~H~ld~~~~l~G  214 (350)
T 3rc1_A          154 QHRQVADMLDEGVIGEIRSFAASFTIPP-K--P--------------QGDIRYQAD--VGGGALLDIGVYPIRAAGLFLG  214 (350)
T ss_dssp             HHHHHHHHHHTTTTCSEEEEEEEEECCC-C--C--------------TTCGGGCTT--TTCHHHHHTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCCeEEEEEEEecCC-C--C--------------ccccccCcc--cCccHHHHHHHHHHHHHHHHcC
Confidence            6667777776555566766655543211 1  1              124432111  124567777655554 579999


Q ss_pred             CCCCceEEEEcC------CcceEEEEEecCCcee
Q 018600          306 AEYDNIEIIIHP------QSIIHSMVETQVLLYP  333 (353)
Q Consensus       306 i~~d~IevvIHP------qSiIHsmVef~DGs~~  333 (353)
                      -+++.+......      +...+.+++|.||..-
T Consensus       215 ~~~~~v~a~~~~~~~~~~d~~~~~~l~~~~G~~~  248 (350)
T 3rc1_A          215 ADLEFVGAVLRHERDRDVVVGGNALLTTRQGVTA  248 (350)
T ss_dssp             TTCEEEEEEEEEETTTTEEEEEEEEEECTTCCEE
T ss_pred             CCcEEEEEEEEeCCCCCccceEEEEEEECCCCEE
Confidence            777777765432      1245778899888653

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=98.24  E-value=0.00015  Score=68.02  Aligned_cols=214  Identities=14%  Similarity=0.128  Sum_probs=137.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|. |.||..-+..++++| +++|+++. .+|-+.+.+.+++|..+.        +                  
T Consensus         5 ~~~vgiiG~-G~~g~~~~~~l~~~~-~~~lvav~-d~~~~~~~~~~~~~g~~~--------~------------------   55 (354)
T 3db2_A            5 PVGVAAIGL-GRWAYVMADAYTKSE-KLKLVTCY-SRTEDKREKFGKRYNCAG--------D------------------   55 (354)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTCS-SEEEEEEE-CSSHHHHHHHHHHHTCCC--------C------------------
T ss_pred             cceEEEEcc-CHHHHHHHHHHHhCC-CcEEEEEE-CCCHHHHHHHHHHcCCCC--------c------------------
Confidence            468999997 999999999999887 59999964 567888877777775432        0                  


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce-eecccchhHHhhhcCCeEee-----cCCchh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL-V~aG~li~~~a~~~~~~IlP-----VDSEHs  229 (353)
                        ..+.+++..+++|.|+.+..-..-...+..|+++||.|.+-.-=++ ..-..-+.+++++++..+..     -+..+.
T Consensus        56 --~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~  133 (354)
T 3db2_A           56 --ATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALR  133 (354)
T ss_dssp             --SSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHH
T ss_pred             --CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHH
Confidence              1234556667899999999998889999999999998775321011 11244466778888876542     244555


Q ss_pred             HHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCCC
Q 018600          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (353)
Q Consensus       230 AIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (353)
                      .+-++++.....+|..+-.+-+  -+|.    .        .....+|..-..- --.+.|++-|.-.|. ++||||- +
T Consensus       134 ~~k~~i~~g~iG~i~~v~~~~~--~~~~----~--------~~~~~~w~~~~~~-~ggG~l~d~g~H~ld~~~~l~G~-~  197 (354)
T 3db2_A          134 KMKEMIDTKEIGEVSSIEAVFS--NERG----L--------ELKKGNWRGEPAT-APGGPLTQLGVHQIDNLQFLLGP-V  197 (354)
T ss_dssp             HHHHHHHTTTTCCEEEEEEEEE--CSGG----G--------TCCTTCGGGCTTT-STTTHHHHTHHHHHHHHHHHHCC-E
T ss_pred             HHHHHHhcCCCCCeEEEEEEEE--eccC----c--------ccccCCCcccccc-CCCceeccchhHHHHHHHHHhCC-C
Confidence            6666666555556666554432  1111    0        0122356432211 012477777766665 4899995 4


Q ss_pred             CceEEEEc-------CCcceEEEEEecCCceeeee
Q 018600          309 DNIEIIIH-------PQSIIHSMVETQVLLYPVVM  336 (353)
Q Consensus       309 d~IevvIH-------PqSiIHsmVef~DGs~~~~~  336 (353)
                      +.+.....       -.-..+.+++|.||..-...
T Consensus       198 ~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~  232 (354)
T 3db2_A          198 ARVFNFGKPMYTEVENITVNQTLLEFEDGKQAYLG  232 (354)
T ss_dssp             EEEEEEEECCSCSSSSCCEEEEEEEETTSCEEEEE
T ss_pred             eEEEEEeeccCCCCCCCceEEEEEEECCCCEEEEE
Confidence            66666542       23457889999998754433

>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}

Probab=98.24  E-value=7.6e-05  Score=71.48  Aligned_cols=231  Identities=17%  Similarity=0.122  Sum_probs=140.3

Q ss_pred             CCCeeEEEEecCCh---HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCC
Q 018600           74 DGPKPISVLGSTGS---IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        74 ~~~k~I~ILGSTGS---IGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      ..+.||+|+| +|.   ||..-+..++..+ +|+|+|..+.+|-+...+.+++|.-.-     ...+..+++.+.+    
T Consensus        10 m~~~rvgiiG-~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~~~-----~~~~~~~~~ll~~----   78 (398)
T 3dty_A           10 PQPIRWAMVG-GGSQSQIGYIHRCAALRDN-TFVLVAGAFDIDPIRGSAFGEQLGVDS-----ERCYADYLSMFEQ----   78 (398)
T ss_dssp             CSCEEEEEEE-CCTTCSSHHHHHHHHHGGG-SEEEEEEECCSSHHHHHHHHHHTTCCG-----GGBCSSHHHHHHH----
T ss_pred             cCcceEEEEc-CCccchhHHHHHHHHhhCC-CeEEEEEEeCCCHHHHHHHHHHhCCCc-----ceeeCCHHHHHhc----
Confidence            3456899999 576   9999988888775 499999778889999988888886420     0111122221110    


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----  223 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----  223 (353)
                                 +.++.+++|.|+.+..-..-...+.+|+++||.|.+ -|=.-  +.-..-+.++|++++..+.-     
T Consensus        79 -----------~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r  146 (398)
T 3dty_A           79 -----------EARRADGIQAVSIATPNGTHYSITKAALEAGLHVVC-EKPLCFTVEQAENLRELSHKHNRIVGVTYGYA  146 (398)
T ss_dssp             -----------HTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCEEEE-CSCSCSCHHHHHHHHHHHHHTTCCEEECCGGG
T ss_pred             -----------ccccCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEE-eCCCcCCHHHHHHHHHHHHHcCCeEEEEeccc
Confidence                       001236799999998888888899999999999876 33211  12344566788888876542     


Q ss_pred             cCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhh
Q 018600          224 ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHY  302 (353)
Q Consensus       224 VDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~  302 (353)
                      -+.....+-++|+.....+|..+-.+-+.+-++ .+.+.        --...+|..-++..=.++.|++-|.-.|. ++|
T Consensus       147 ~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~~~~-~~~~~--------~~~~~~Wr~~~~~~G~gG~l~d~g~H~idl~~~  217 (398)
T 3dty_A          147 GHQLIEQAREMIAAGELGDVRMVHMQFAHGFHS-APVEA--------QSQATQWRVDPRQAGPSYVLGDVGTHPLYLSEV  217 (398)
T ss_dssp             GSHHHHHHHHHHHTTTTCSEEEEEEEEECCTTC-C--------------------------CCCSHHHHTTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCCCCeEEEEEEEeccccc-Ccccc--------ccCCCCcccCHHHcCCccHHHHHHHHHHHHHHH
Confidence            233444566666655566777777765443222 11110        02245676555443334568887655554 568


Q ss_pred             h-cCCCCCceEEEEc--------CCcceEEEEEecCCceeeee
Q 018600          303 L-FGAEYDNIEIIIH--------PQSIIHSMVETQVLLYPVVM  336 (353)
Q Consensus       303 L-F~i~~d~IevvIH--------PqSiIHsmVef~DGs~~~~~  336 (353)
                      | ||.+++.+.....        -.-..+.+++|.||..-...
T Consensus       218 l~~G~~~~~V~a~~~~~~~~~~~~~D~~~~~l~~~~G~~~~~~  260 (398)
T 3dty_A          218 MLPDLKIKRLMCSRQSFVASRAPLEDNAYTLMEYEGGAMGMVW  260 (398)
T ss_dssp             HCTTCCEEEEEEEEECSSGGGTTSCSEEEEEEEETTSCEEEEE
T ss_pred             HhcCCCcEEEEEEeEeecCCCCCcceEEEEEEEECCCCEEEEE
Confidence            8 8988888877654        23367889999999764433

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=98.24  E-value=2.5e-05  Score=72.65  Aligned_cols=209  Identities=14%  Similarity=0.120  Sum_probs=134.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|+ |.||...+..+++.| .++|+|++. +|-+.+.+.+++|...                        +++ 
T Consensus         5 ~~rigiiG~-G~ig~~~~~~l~~~~-~~~~~av~d-~~~~~~~~~a~~~~~~------------------------~~~-   56 (329)
T 3evn_A            5 KVRYGVVST-AKVAPRFIEGVRLAG-NGEVVAVSS-RTLESAQAFANKYHLP------------------------KAY-   56 (329)
T ss_dssp             CEEEEEEBC-CTTHHHHHHHHHHHC-SEEEEEEEC-SCSSTTCC---CCCCS------------------------CEE-
T ss_pred             ceEEEEEec-hHHHHHHHHHHHhCC-CcEEEEEEc-CCHHHHHHHHHHcCCC------------------------ccc-
Confidence            568999998 999999999998876 599999864 4444444444444321                        122 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce-eecccchhHHhhhcCCeEeec-----CCchh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILPA-----DSEHS  229 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL-V~aG~li~~~a~~~~~~IlPV-----DSEHs  229 (353)
                        ..+.+++..+++|.|+.+..-..-...+..|+++||.|.+-.-=++ +.-..-+.++|++++..+.--     +..+.
T Consensus        57 --~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~  134 (329)
T 3evn_A           57 --DKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQ  134 (329)
T ss_dssp             --SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHH
T ss_pred             --CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHH
Confidence              2345666777899999999888888889999999999875321111 122344667888888765421     33445


Q ss_pred             HHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCCC
Q 018600          230 AIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEY  308 (353)
Q Consensus       230 AIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~  308 (353)
                      .+-++|......+|..+-.+.+. |.                ...++|.--++  -..+.|++-|.-.|. ++||||-++
T Consensus       135 ~~~~~i~~g~iG~i~~v~~~~~~-~~----------------~~~~~w~~~~~--~gGG~l~d~g~H~id~~~~l~G~~~  195 (329)
T 3evn_A          135 VIKKLLASGEIGEVISISSTTAY-PN----------------IDHVTWFRELE--LGGGTVHFMAPYALSYLQYLFDATI  195 (329)
T ss_dssp             HHHHHHHTTTTCSEEEEEEEEEC-TT----------------GGGSTTTTCGG--GTCSHHHHHHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHhCCCCCCeEEEEEEecc-CC----------------CCCcccccCcc--cCCcHHHHHHHHHHHHHHHHhCCCc
Confidence            66666665556677777666542 11                12345643222  356778887765554 689999776


Q ss_pred             CceEEEEcC-----CcceEEEEEecCCcee
Q 018600          309 DNIEIIIHP-----QSIIHSMVETQVLLYP  333 (353)
Q Consensus       309 d~IevvIHP-----qSiIHsmVef~DGs~~  333 (353)
                      ..+....+.     .-..+.+++|.||..-
T Consensus       196 ~~v~~~~~~~~~~~~d~~~~~l~~~~G~~~  225 (329)
T 3evn_A          196 THASGTATFPKGQSDSQSKLLLQLSNGVLV  225 (329)
T ss_dssp             EEEEEEEECCTTSCCSEEEEEEEETTSCEE
T ss_pred             eEEEEEEEeCCCCcceEEEEEEEECCCCEE
Confidence            666655432     2356778888888653

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=98.21  E-value=0.00012  Score=68.39  Aligned_cols=206  Identities=14%  Similarity=0.148  Sum_probs=135.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|. |.||+.-+..+.++| .++|+++. .+|-+.+.+.+++|....++                         
T Consensus         2 ~~rvgiIG~-G~~g~~~~~~l~~~~-~~~l~av~-d~~~~~~~~~~~~~~~~~~~-------------------------   53 (344)
T 3ezy_A            2 SLRIGVIGL-GRIGTIHAENLKMID-DAILYAIS-DVREDRLREMKEKLGVEKAY-------------------------   53 (344)
T ss_dssp             CEEEEEECC-SHHHHHHHHHGGGST-TEEEEEEE-CSCHHHHHHHHHHHTCSEEE-------------------------
T ss_pred             eeEEEEEcC-CHHHHHHHHHHHhCC-CcEEEEEE-CCCHHHHHHHHHHhCCCcee-------------------------
Confidence            358999996 999999999998876 49999975 45777777777777632221                         


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc--eeecccchhHHhhhcCCeEeec-----CCch
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILPA-----DSEH  228 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES--LV~aG~li~~~a~~~~~~IlPV-----DSEH  228 (353)
                        +.+.+++..+++|.|+.+..-..-..-+..|+++||.|.+ -|=.  =+..+.-+.+++++++..+..-     +..+
T Consensus        54 --~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~-EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~  130 (344)
T 3ezy_A           54 --KDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFC-EKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNF  130 (344)
T ss_dssp             --SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHH
T ss_pred             --CCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEE-ECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHH
Confidence              1234556667899999998887778889999999998763 3321  1223455677888888766532     4445


Q ss_pred             hHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCC
Q 018600          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (353)
Q Consensus       229 sAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (353)
                      ..+-++++.....+|..+..+. ..|..                  |.|.- .+  -..+.|++-|.-.|. ++||||-+
T Consensus       131 ~~~k~~i~~G~iG~i~~~~~~~-~~~~~------------------~~~~~-~~--~~GG~l~d~g~H~lDl~~~l~G~~  188 (344)
T 3ezy_A          131 KKLKEAVENGTIGKPHVLRITS-RDPAP------------------PPLDY-IR--VSGGIFLDMTIHDFDMARYIMGEE  188 (344)
T ss_dssp             HHHHHHHHTTTTSSEEEEEEEE-ECSSC------------------CCHHH-HH--TTTCHHHHTHHHHHHHHHHHHSSC
T ss_pred             HHHHHHHHcCCCCCeEEEEEEe-eCCCC------------------CCccc-cc--CCCceEecccchHHHHHHHHcCCC
Confidence            5666777655556677766653 22321                  11110 00  112567777665555 57999977


Q ss_pred             CCceEEEEcC-----------CcceEEEEEecCCceee
Q 018600          308 YDNIEIIIHP-----------QSIIHSMVETQVLLYPV  334 (353)
Q Consensus       308 ~d~IevvIHP-----------qSiIHsmVef~DGs~~~  334 (353)
                      ++.+......           .-..+.+++|.||..-.
T Consensus       189 ~~~V~a~~~~~~~~~~~~~~~~D~~~~~l~~~~G~~~~  226 (344)
T 3ezy_A          189 VEEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGALGV  226 (344)
T ss_dssp             EEEEEEEEECCSCHHHHHTTCCSEEEEEEEETTSCEEE
T ss_pred             CeEEEEEeccccccccccCCCCceEEEEEEECCCCEEE
Confidence            7777775431           23457788999987543

>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*

Probab=98.19  E-value=2.6e-06  Score=81.27  Aligned_cols=145  Identities=23%  Similarity=0.252  Sum_probs=97.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHED------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd------~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      .||+|+| +|.||+..++.+.++++      +++|++++..+ .++..+       .       -...++.+.+..  ..
T Consensus         7 irvgIiG-~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~-~~~~~~-------~-------~~~~~~~~~~~~--~~   68 (331)
T 3c8m_A            7 INLSIFG-LGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSL-HSYYNE-------R-------IDIGKVISYKEK--GS   68 (331)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSS-CEEECT-------T-------CCHHHHHHHHHT--TC
T ss_pred             EeEEEEe-cCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECC-hHHhhc-------c-------cChHHHhhhhcc--CC
Confidence            5899999 59999999999988762      68999987543 221110       0       001122221111  01


Q ss_pred             cEEEec-HHHHHHHhcCCCCcEEEEeccCc----cCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe---
Q 018600          151 PEILAG-EQGVIEAARHPDAVTVVTGIVGC----AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL---  222 (353)
Q Consensus       151 ~~v~~G-~~gl~~~a~~~~~D~Vv~AIvG~----aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il---  222 (353)
                      ++.++. ...+.++. .+++|+|+.+..+.    ....-...|+++||.|..+||.-+..-++-+.++|+++|+.++   
T Consensus        69 ~~~~~~~~~d~~~ll-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea  147 (331)
T 3c8m_A           69 LDSLEYESISASEAL-ARDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEA  147 (331)
T ss_dssp             GGGCCSEECCHHHHH-HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGG
T ss_pred             cccccCCCCCHHHHh-CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEe
Confidence            110111 11355666 67899999999886    5556788999999999999999887778888999999998775   


Q ss_pred             ------ecCCchhHHHHhhcCCCCCCcceE
Q 018600          223 ------PADSEHSAIFQCIQGLPEGALRRI  246 (353)
Q Consensus       223 ------PVDSEHsAIfQ~L~g~~~~~v~kI  246 (353)
                            |+   ...+-++|.|.   .|.+|
T Consensus       148 ~vg~giPi---i~~l~~~l~g~---~I~~I  171 (331)
T 3c8m_A          148 TVAGGVPL---FSFIDYSVLPS---RIKKF  171 (331)
T ss_dssp             GSSTTSCC---HHHHHHHSTTC---CCCEE
T ss_pred             ecccccHH---HHHHHHHhhcC---cccEE
Confidence                  43   56677777664   45554

>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}

Probab=98.18  E-value=6.3e-05  Score=71.22  Aligned_cols=210  Identities=13%  Similarity=0.120  Sum_probs=135.8

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+|. |.||.. -+..+++.|+ ++|+|++ .+|-+.+.+.+++|.-                        ++++
T Consensus         5 ~~rigiIG~-G~~g~~~~~~~l~~~~~-~~l~av~-d~~~~~~~~~a~~~~~------------------------~~~~   57 (359)
T 3m2t_A            5 LIKVGLVGI-GAQMQENLLPSLLQMQD-IRIVAAC-DSDLERARRVHRFISD------------------------IPVL   57 (359)
T ss_dssp             CEEEEEECC-SHHHHHTHHHHHHTCTT-EEEEEEE-CSSHHHHGGGGGTSCS------------------------CCEE
T ss_pred             cceEEEECC-CHHHHHHHHHHHHhCCC-cEEEEEE-cCCHHHHHHHHHhcCC------------------------Cccc
Confidence            468999995 899985 7899998875 9999976 5577766665655521                        1122


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cCCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSE  227 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VDSE  227 (353)
                         +.+.+++..+++|.|+.+..-..-...+.+|+++||.|.+ -|=.-  +.-..-+.++++++|..+.-     -+..
T Consensus        58 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~  133 (359)
T 3m2t_A           58 ---DNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFV-EKPPCATLEELETLIDAARRSDVVSGVGMNFKFARP  133 (359)
T ss_dssp             ---SSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHH
T ss_pred             ---CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEE-ECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHH
Confidence               1234555567899999988777777788999999999775 22211  11234456788888875542     2334


Q ss_pred             hhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHh-hhhcCC
Q 018600          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA-HYLFGA  306 (353)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA-~~LF~i  306 (353)
                      +..+-+.+......+|..+..+-...    .+             ..|.|...+.   ..+.|++-|.-.|.. +||||-
T Consensus       134 ~~~~k~~i~~g~iG~i~~~~~~~~~~----~~-------------~~~~w~~~~~---~gg~l~d~~~H~iD~~~~l~G~  193 (359)
T 3m2t_A          134 VRQLREMTQVDEFGETLHIQLNHYAN----KP-------------RAPLWGLDST---LRSFLLAQAIHTIDLAITFGDG  193 (359)
T ss_dssp             HHHHHHHHTSGGGCCEEEEEEEEECC----CC-------------SSCCTTCSCH---HHHHHHHTHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHCCCCCCeEEEEEEEecC----CC-------------CCCCcccCCC---ccchhhhcccHHHHHHHHHhCC
Confidence            45555666543344555555443211    11             2477886554   346778877766664 689987


Q ss_pred             CCCceEEEEc---CCcceEEEEEecCCceeeee
Q 018600          307 EYDNIEIIIH---PQSIIHSMVETQVLLYPVVM  336 (353)
Q Consensus       307 ~~d~IevvIH---PqSiIHsmVef~DGs~~~~~  336 (353)
                      +++++....+   ..-.++.+++|.||..-...
T Consensus       194 ~~~~V~a~~~~~~~~d~~~~~l~~~~G~~~~~~  226 (359)
T 3m2t_A          194 ELRRVQSSVQRHDDALIVRADMAFSSGATASLL  226 (359)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEEEETTSCEEEEE
T ss_pred             CceEEEEEeeccCCCeEEEEEEEECCCCEEEEE
Confidence            7888877765   23457888899998764433

>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}

Probab=98.16  E-value=0.00012  Score=69.86  Aligned_cols=211  Identities=15%  Similarity=0.117  Sum_probs=135.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|+-+.+|..-+..++++|+ ++|+|++ ..|-+...+.+++|..+.  .                        
T Consensus         2 ~~rigiiG~G~~~~~~~~~~l~~~~~-~~l~av~-d~~~~~~~~~a~~~g~~~--~------------------------   53 (387)
T 3moi_A            2 KIRFGICGLGFAGSVLMAPAMRHHPD-AQIVAAC-DPNEDVRERFGKEYGIPV--F------------------------   53 (387)
T ss_dssp             CEEEEEECCSHHHHTTHHHHHHHCTT-EEEEEEE-CSCHHHHHHHHHHHTCCE--E------------------------
T ss_pred             ceEEEEEeCCHHHHHHHHHHHHhCCC-eEEEEEE-eCCHHHHHHHHHHcCCCe--E------------------------
Confidence            45899999876999999999998874 9999976 457777777777775431  1                        


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc-eeecccchhHHhhhcCCeEee-----cCCchh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET-LIAGGPFVLPLAHKHNIKILP-----ADSEHS  229 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES-LV~aG~li~~~a~~~~~~IlP-----VDSEHs  229 (353)
                        ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+-.-=+ =+.-+.-+.++|++++..+.-     -+..+.
T Consensus        54 --~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~  131 (387)
T 3moi_A           54 --ATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVR  131 (387)
T ss_dssp             --SSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHH
T ss_pred             --CCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHH
Confidence              123445556789999999888888888999999999987533211 123455677888888876542     233344


Q ss_pred             HHHHhhcCCCCCCcceEEEEecCCcC--CCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCC
Q 018600          230 AIFQCIQGLPEGALRRIILTASGGAF--RDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGA  306 (353)
Q Consensus       230 AIfQ~L~g~~~~~v~kIiLTASGGPF--r~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i  306 (353)
                      .+-++|+.....+|..+..... ++|  +.+..+.+.            ..+|      .+.|++-|--.|. ++||||-
T Consensus       132 ~~k~~i~~g~iG~i~~~~~~~~-~~~~~~~~~~~~~~------------~~~g------gG~l~d~g~H~id~~~~l~g~  192 (387)
T 3moi_A          132 TLRAIVQEGSVGRVSMLNCFNY-TDFLYRPRRPEELD------------TSKG------GGIIYNQLPHQIDSIKTITGQ  192 (387)
T ss_dssp             HHHHHHHHCTTCCEEEEEEEEE-CCGGGSCCCGGGGC------------GGGT------CSHHHHTHHHHHHHHHHHHCC
T ss_pred             HHHHHHhcCCCCCeEEEEEEec-cccccCCCChhhcc------------cccC------CcchhhhHHHHHHHHHHHhCC
Confidence            5555555434445554443221 122  222211110            0112      3567777655554 5789997


Q ss_pred             CCCceEEEEc---C----CcceEEEEEecCCceeee
Q 018600          307 EYDNIEIIIH---P----QSIIHSMVETQVLLYPVV  335 (353)
Q Consensus       307 ~~d~IevvIH---P----qSiIHsmVef~DGs~~~~  335 (353)
                      +++.+.....   |    +-..+.+++|.||..-..
T Consensus       193 ~~~~V~a~~~~~~~~~~~~d~~~~~l~f~~G~~~~~  228 (387)
T 3moi_A          193 RITAVRAMTGRLDPKRPTEGNCAAMLTLEDGACAVM  228 (387)
T ss_dssp             CEEEEEEEEECCCTTSCSCCEEEEEEEETTSCEEEE
T ss_pred             CceEEEEEEeecCCCCCcceEEEEEEEECCCCEEEE
Confidence            7788877752   2    346788999999976443

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=98.16  E-value=0.00034  Score=65.65  Aligned_cols=203  Identities=11%  Similarity=0.158  Sum_probs=130.2

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+|. |.||+. .+..++++|+ ++|+|++. +|-+.+.   +++.                        +++++
T Consensus         7 ~~rvgiiG~-G~~g~~~~~~~~~~~~~-~~l~av~d-~~~~~~~---~~~~------------------------~~~~~   56 (352)
T 3kux_A            7 KIKVGLLGY-GYASKTFHAPLIMGTPG-LELAGVSS-SDASKVH---ADWP------------------------AIPVV   56 (352)
T ss_dssp             CEEEEEECC-SHHHHHTHHHHHHTSTT-EEEEEEEC-SCHHHHH---TTCS------------------------SCCEE
T ss_pred             CceEEEECC-CHHHHHHHHHHHhhCCC-cEEEEEEC-CCHHHHH---hhCC------------------------CCceE
Confidence            468999995 999997 8899998875 99999764 4555443   1111                        12233


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc-eeecccchhHHhhhcCCeEeec-----CCch
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET-LIAGGPFVLPLAHKHNIKILPA-----DSEH  228 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES-LV~aG~li~~~a~~~~~~IlPV-----DSEH  228 (353)
                         ..+.+++..+++|.|+.+..-..-...+.+|+++||.|.+-.-=+ =+.-..-+.++|+++|..+..-     +..+
T Consensus        57 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~  133 (352)
T 3kux_A           57 ---SDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDF  133 (352)
T ss_dssp             ---SCHHHHHHCSSCCEEEECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHH
T ss_pred             ---CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHH
Confidence               234556667889999999988888899999999999987632201 1223455678888888765531     3334


Q ss_pred             hHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHHh-hhhcCCC
Q 018600          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA-HYLFGAE  307 (353)
Q Consensus       229 sAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIEA-~~LF~i~  307 (353)
                      ..+-++|......+|..+-.+-  +.++..              ..++|..=+  .-..+.|++-|.-.|.. +|||| +
T Consensus       134 ~~~~~~i~~g~iG~i~~~~~~~--~~~~~~--------------~~~~w~~~~--~~ggG~l~d~g~H~id~~~~l~G-~  194 (352)
T 3kux_A          134 LTLKTLLAEGSLGNVVYFESHF--DRYRPE--------------IRQRWREQA--GAGGGIWYDLGPHLLDQALQLFG-L  194 (352)
T ss_dssp             HHHHHHHHHTTTCSEEEEEEEE--ECBCCS--------------SCSSCSCC-----CBCHHHHHHHHHHHHHHHHHC-C
T ss_pred             HHHHHHHhcCCCCceEEEEEEE--eccCCC--------------CCcccccCC--CCCCceeehhhhHHHHHHHHHhC-C
Confidence            4555566544445565554332  222211              145676432  34567888888777764 89999 5


Q ss_pred             CCceEEEEc---C----CcceEEEEEecCCc
Q 018600          308 YDNIEIIIH---P----QSIIHSMVETQVLL  331 (353)
Q Consensus       308 ~d~IevvIH---P----qSiIHsmVef~DGs  331 (353)
                      ++.+.....   +    .-..+.+++| +|.
T Consensus       195 p~~v~a~~~~~~~~~~~~d~~~~~l~~-~g~  224 (352)
T 3kux_A          195 PETLNVDLGMLRPGSQSVDYFHAVLSY-PGQ  224 (352)
T ss_dssp             CSEEEEEEECCSTTCCSBCEEEEEEEE-TTE
T ss_pred             CeEEEEEEEEecCCCCcccEEEEEEEE-CCE
Confidence            788887763   2    2256778888 553

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=98.15  E-value=0.00014  Score=70.43  Aligned_cols=228  Identities=12%  Similarity=0.103  Sum_probs=138.8

Q ss_pred             CCCeeEEEEecCCh---HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCC
Q 018600           74 DGPKPISVLGSTGS---IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        74 ~~~k~I~ILGSTGS---IGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      ..+.||+|+| +|.   ||..-+..++..+ +|+|++..+.+|.+...+.+++|.-.-     ...+..           
T Consensus        35 m~~~rvgiiG-~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~~~-----~~~~~~-----------   96 (417)
T 3v5n_A           35 QKRIRLGMVG-GGSGAFIGAVHRIAARLDD-HYELVAGALSSTPEKAEASGRELGLDP-----SRVYSD-----------   96 (417)
T ss_dssp             CCCEEEEEES-CC--CHHHHHHHHHHHHTS-CEEEEEEECCSSHHHHHHHHHHHTCCG-----GGBCSC-----------
T ss_pred             CCcceEEEEc-CCCchHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHcCCCc-----ccccCC-----------
Confidence            3456899999 555   9999888888765 499998777889999988888886320     011111           


Q ss_pred             cEEEecHHHHHHHhcC-----CCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce-eecccchhHHhhhcCCeEee-
Q 018600          151 PEILAGEQGVIEAARH-----PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILP-  223 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~-----~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL-V~aG~li~~~a~~~~~~IlP-  223 (353)
                               +.++++.     +++|.|+.+..-..-..-+.+|+++||.|.+-.-=++ +.-..-+.+++++++..+.- 
T Consensus        97 ---------~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~  167 (417)
T 3v5n_A           97 ---------FKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLT  167 (417)
T ss_dssp             ---------HHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEE
T ss_pred             ---------HHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence                     2223333     6899999998888888889999999999875322111 11233456788888876542 


Q ss_pred             ----cCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH
Q 018600          224 ----ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE  299 (353)
Q Consensus       224 ----VDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE  299 (353)
                          -+..+..+-++|+.....+|..+-.+-+.+ |+..+.+.       +.-...+|..-++..=+++.|++-|.-.|.
T Consensus       168 ~~~R~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~-~~~~~~~~-------~~~~~~~Wr~~~~~~G~gG~l~d~g~H~lD  239 (417)
T 3v5n_A          168 HNYTGYPMVRQAREMIENGDIGAVRLVQMEYPQD-WLTENIEQ-------SGQKQAAWRTDPARSGAGGSTGDIGTHAYN  239 (417)
T ss_dssp             CGGGGSHHHHHHHHHHHTTTTCSEEEEEEEEECC-TTSCC---------------------------CCHHHHTHHHHHH
T ss_pred             ecccCCHHHHHHHHHHhcCCCCCeEEEEEEEecc-cccCcccc-------ccCCCcCcccCHHHcCCccHHHHHHHHHHH
Confidence                234445666666655556777777665433 22221110       012234676555544445778888765554


Q ss_pred             -hhhhcCCCCCceEEEEcC-------CcceEEEEEecC----Cceeeee
Q 018600          300 -AHYLFGAEYDNIEIIIHP-------QSIIHSMVETQV----LLYPVVM  336 (353)
Q Consensus       300 -A~~LF~i~~d~IevvIHP-------qSiIHsmVef~D----Gs~~~~~  336 (353)
                       ++||||-+++.+......       .-..+.+++|.|    |..-...
T Consensus       240 l~~~l~G~~~~~V~a~~~~~~~~~~~~D~~~~~l~~~~~~~~G~~~~~~  288 (417)
T 3v5n_A          240 LGCFVSGLELEELAADLDSFVGGRQLDDNAHVLMRFREKDGTRAKGMLW  288 (417)
T ss_dssp             HHHHHHCCCEEEEEEEEECCSTTCCSCCEEEEEEEECCBTTBCCEEEEE
T ss_pred             HHHHhcCCCceEEEEEEEecCCCCCCceEEEEEEEECCCCCCCeEEEEE
Confidence             579999877888776542       446788999999    8654443

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=98.05  E-value=0.00035  Score=66.26  Aligned_cols=202  Identities=19%  Similarity=0.240  Sum_probs=126.6

Q ss_pred             CCeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .+.||+|+|. |.||+. .+..++++|+ ++|+|++- +|-+++.   +++.                        .+++
T Consensus         6 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~-~~l~av~d-~~~~~~~---~~~~------------------------~~~~   55 (364)
T 3e82_A            6 NTINIALIGY-GFVGKTFHAPLIRSVPG-LNLAFVAS-RDEEKVK---RDLP------------------------DVTV   55 (364)
T ss_dssp             -CEEEEEECC-SHHHHHTHHHHHHTSTT-EEEEEEEC-SCHHHHH---HHCT------------------------TSEE
T ss_pred             CcceEEEECC-CHHHHHHHHHHHhhCCC-eEEEEEEc-CCHHHHH---hhCC------------------------CCcE
Confidence            3568999998 999996 8888988875 99999764 4555433   1221                        1223


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeeccc--ceeecccchhHHhhhcCCeEee-----cCC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE--TLIAGGPFVLPLAHKHNIKILP-----ADS  226 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKE--SLV~aG~li~~~a~~~~~~IlP-----VDS  226 (353)
                      +   ..+.+++..+++|.|+.+..-..-...+.+|+++||.|.+ -|=  .=+.-..-+.++|+++|..+..     -+.
T Consensus        56 ~---~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al~aGk~Vl~-EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p  131 (364)
T 3e82_A           56 I---ASPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVV-DKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDS  131 (364)
T ss_dssp             E---SCHHHHHTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCH
T ss_pred             E---CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEE-eCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCH
Confidence            3   2345666677899999998888888889999999999765 452  1222344567788888876643     233


Q ss_pred             chhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcC
Q 018600          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (353)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (353)
                      .+..+-++|.......|..+-..-  +-++...              .++|..=+  .-..+.|++-|.-.|. ++||||
T Consensus       132 ~~~~~~~~i~~g~iG~i~~~~~~~--~~~~~~~--------------~~~w~~~~--~~ggG~l~d~g~H~id~~~~l~G  193 (364)
T 3e82_A          132 DYLGIRQVIEQGTLGAVKHFESHF--DRFRPEV--------------RVRWREQN--VPGSGLWFDLGPHLIDQALQLFG  193 (364)
T ss_dssp             HHHHHHHHHHHTTTCSEEEEEEEE--ECBCCCC---------------------------CCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcceEEEEEEe--eccCCCC--------------CcccccCC--CCCCChHHhhhhHHHHHHHHHhC
Confidence            445566666544445565554332  2222111              24676432  3356788888877776 589999


Q ss_pred             CCCCceEEEEcC-------CcceEEEEEecC
Q 018600          306 AEYDNIEIIIHP-------QSIIHSMVETQV  329 (353)
Q Consensus       306 i~~d~IevvIHP-------qSiIHsmVef~D  329 (353)
                       +++.+......       .-..+.+++|.|
T Consensus       194 -~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~  223 (364)
T 3e82_A          194 -LPQSVQGNIATLRDGAEINDWAHVVLNYPA  223 (364)
T ss_dssp             -CCSEEEEEEECCSTTCCSCCEEEEEEECSS
T ss_pred             -CCeEEEEEEEeecCCCCcccEEEEEEEECC
Confidence             67888877632       235677888877

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=98.00  E-value=0.00011  Score=68.03  Aligned_cols=195  Identities=14%  Similarity=0.129  Sum_probs=129.2

Q ss_pred             CeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+|+ |.||. .-+..+.+.| .++|+  .+.+|-+.+.+.+++|..+.++ .|                     
T Consensus         2 ~~~igiIG~-G~ig~~~~~~~l~~~~-~~~l~--v~d~~~~~~~~~a~~~g~~~~~-~~---------------------   55 (323)
T 1xea_A            2 SLKIAMIGL-GDIAQKAYLPVLAQWP-DIELV--LCTRNPKVLGTLATRYRVSATC-TD---------------------   55 (323)
T ss_dssp             CEEEEEECC-CHHHHHTHHHHHTTST-TEEEE--EECSCHHHHHHHHHHTTCCCCC-SS---------------------
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHhCC-CceEE--EEeCCHHHHHHHHHHcCCCccc-cC---------------------
Confidence            358999997 99998 4888888776 48988  5677888888888877643210 00                     


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEeec-----CCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA-----DSE  227 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlPV-----DSE  227 (353)
                        .   .+++ .+++|.|+.+..-..-.....+|+++||.|.+ .|=.-  +..+.-+.+++++++..+..-     +..
T Consensus        56 --~---~~~l-~~~~D~V~i~tp~~~h~~~~~~al~~Gk~V~~-EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~  128 (323)
T 1xea_A           56 --Y---RDVL-QYGVDAVMIHAATDVHSTLAAFFLHLGIPTFV-DKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPL  128 (323)
T ss_dssp             --T---TGGG-GGCCSEEEECSCGGGHHHHHHHHHHTTCCEEE-ESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHH
T ss_pred             --H---HHHh-hcCCCEEEEECCchhHHHHHHHHHHCCCeEEE-eCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHH
Confidence              0   1122 35799999999887777888899999998764 45322  123455678888888776542     445


Q ss_pred             hhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCC-CCCCCCccceecccccchhHHHHH-hhhhcC
Q 018600          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHP-NWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (353)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHP-nW~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (353)
                      +..+-++|+.....+|..+...... ++.                  | .|         ...|++-|.=.|. ++||||
T Consensus       129 ~~~~~~~i~~g~iG~i~~v~~~~~~-~~~------------------p~~~---------~g~l~d~g~H~id~~~~l~G  180 (323)
T 1xea_A          129 YNQHLSELAQQECGALRSLRWEKHR-HAL------------------PGDI---------RTFVFDDFIHPLDSVNLSRQ  180 (323)
T ss_dssp             HHHHCHHHHHTSCTTCSEEEEEEEC-BSC------------------CBCH---------HHHHHTTTHHHHHHHCTTCC
T ss_pred             HHHHHHHHhcCCcCCceEEEEEecC-CCC------------------cccc---------hhhhhhcceeHHHHHHHHhC
Confidence            6666666655444566666554321 110                  1 12         1356777666565 478999


Q ss_pred             CCCCceEEEEc--CCcceEEEEEecCCc
Q 018600          306 AEYDNIEIIIH--PQSIIHSMVETQVLL  331 (353)
Q Consensus       306 i~~d~IevvIH--PqSiIHsmVef~DGs  331 (353)
                      -+++++.....  .+...+.+++|.+|.
T Consensus       181 ~~~~~V~a~~~~~~~d~~~~~~~~~~g~  208 (323)
T 1xea_A          181 CNLDDLHLTYHMSEGLLARLDVQWQTGD  208 (323)
T ss_dssp             CSCTTEEEEEEEETTEEEEEEEEEEETT
T ss_pred             CCceEEEEEEeecCCceEEEEEEEcCCC
Confidence            87778777654  355678888888876

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=98.00  E-value=0.00029  Score=66.87  Aligned_cols=207  Identities=11%  Similarity=0.103  Sum_probs=133.8

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-CCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-PQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk-Pk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      +.||+|+| +|.+|.. .+..++.  .+++|+|++- +|-+...+.+++|. ++.                         
T Consensus        26 ~irvgiiG-~G~~~~~~~~~~~~~--~~~~lvav~d-~~~~~a~~~a~~~~~~~~-------------------------   76 (361)
T 3u3x_A           26 ELRFAAVG-LNHNHIYGQVNCLLR--AGARLAGFHE-KDDALAAEFSAVYADARR-------------------------   76 (361)
T ss_dssp             CCEEEEEC-CCSTTHHHHHHHHHH--TTCEEEEEEC-SCHHHHHHHHHHSSSCCE-------------------------
T ss_pred             CcEEEEEC-cCHHHHHHHHHHhhc--CCcEEEEEEc-CCHHHHHHHHHHcCCCcc-------------------------
Confidence            35899999 5889964 4566653  4699999764 67888888888875 221                         


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce-eecccchhHHhhhcCCeEeec-----C-C
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL-IAGGPFVLPLAHKHNIKILPA-----D-S  226 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL-V~aG~li~~~a~~~~~~IlPV-----D-S  226 (353)
                      +   ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+-.-=++ +.-..-+.++|+++|..+.--     | .
T Consensus        77 ~---~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~p  153 (361)
T 3u3x_A           77 I---ATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFESP  153 (361)
T ss_dssp             E---SCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTCH
T ss_pred             c---CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCCH
Confidence            1   1335566677899999887776677778999999999876432111 223455678888888776533     3 4


Q ss_pred             chhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcC
Q 018600          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (353)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (353)
                      .+..+-++|......+|..+..+   +++| +..           -..|+|..-++  ...+.|++-|.-.|. ++||||
T Consensus       154 ~~~~~k~~i~~g~iG~i~~~~~~---~~~~-~~~-----------~~~~~w~~~~~--~~GG~l~d~g~H~iD~~~~l~G  216 (361)
T 3u3x_A          154 ATVKAGELVAAGAIGEVVHIVGL---GPHR-LRR-----------ETRPDWFFRRA--DYGGILTDIASHQCEQFLFFTG  216 (361)
T ss_dssp             HHHHHHHHHHTTTTSSEEEEEEE---EECC-CCG-----------GGSCGGGTCHH--HHCCHHHHHSHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCCCeEEEEEe---cccc-cCC-----------CCCCCcccCcC--ccCchHHhhhhHHHHHHHHHhC
Confidence            44566666665455566655544   2332 111           13467754332  235788888766664 789999


Q ss_pred             CCCCc-eEEEE----cC-----CcceEEEEEecCCc
Q 018600          306 AEYDN-IEIII----HP-----QSIIHSMVETQVLL  331 (353)
Q Consensus       306 i~~d~-IevvI----HP-----qSiIHsmVef~DGs  331 (353)
                      -++.+ +....    +|     +-..+.+++|.||.
T Consensus       217 ~~~~~~v~a~~~~~~~~~~~~~~d~~~~~l~~~~G~  252 (361)
T 3u3x_A          217 VNDATVLSASVGNQSVPDAPELQDTGSIHLSTGRTT  252 (361)
T ss_dssp             CSCCEEEEEEEECCSCTTSTTSCCEEEEEEECSSCE
T ss_pred             CCCeEEEEEEeecccCCCCCCCCceEEEEEEECCce
Confidence            75543 44443    33     23567889999996

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=97.97  E-value=0.00051  Score=64.97  Aligned_cols=206  Identities=11%  Similarity=0.149  Sum_probs=132.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|. |.||..-+..+++.| .++|+|+.- +|-+.+ +.++++..+                         ++ 
T Consensus         5 ~~~vgiiG~-G~~g~~~~~~l~~~~-~~~l~av~d-~~~~~~-~~a~~~g~~-------------------------~~-   54 (359)
T 3e18_A            5 KYQLVIVGY-GGMGSYHVTLASAAD-NLEVHGVFD-ILAEKR-EAAAQKGLK-------------------------IY-   54 (359)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTST-TEEEEEEEC-SSHHHH-HHHHTTTCC-------------------------BC-
T ss_pred             cCcEEEECc-CHHHHHHHHHHHhCC-CcEEEEEEc-CCHHHH-HHHHhcCCc-------------------------ee-
Confidence            468999996 999999999999886 599999764 466654 345554432                         11 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cCCch
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----ADSEH  228 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VDSEH  228 (353)
                        ..+.+++..+++|.|+.+..-..-..-+.+|+++||.|..- |=.-  +.-..-+.++|+++|..+.-     -+..+
T Consensus        55 --~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~E-KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~  131 (359)
T 3e18_A           55 --ESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCE-KPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDF  131 (359)
T ss_dssp             --SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE-SSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHH
T ss_pred             --CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEee-CCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHH
Confidence              13355666678999999988888888899999999987642 2111  22344567788888876542     24445


Q ss_pred             hHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCC
Q 018600          229 SAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (353)
Q Consensus       229 sAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (353)
                      ..+-+.|+.....+|..+-..-.+  ++..               .++|..=+.  -..+.|++-|.-.|. +.||||-+
T Consensus       132 ~~~k~~i~~g~iG~i~~~~~~~~~--~~~~---------------~~~wr~~~~--~gGG~l~d~g~H~iD~~~~l~G~~  192 (359)
T 3e18_A          132 LIIKEMFEQKTIGEMFHLESRVHG--ANGI---------------PGDWRHLKA--HGGGMVLDWGVHLLDQLLFLVDSN  192 (359)
T ss_dssp             HHHHHHHHHTTTSSEEEEEEEEEC--SSCS---------------CSSGGGCGG--GTCSHHHHTHHHHHHHHHHHCCSC
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEec--CCCC---------------CCCcccCcC--CCCcHHHHHhhHHHHHHHHHhCCC
Confidence            556666654444556554433222  2211               135643221  245678888766665 57999976


Q ss_pred             CCceEEEEcC------CcceEEEEEecCCcee
Q 018600          308 YDNIEIIIHP------QSIIHSMVETQVLLYP  333 (353)
Q Consensus       308 ~d~IevvIHP------qSiIHsmVef~DGs~~  333 (353)
                      ++.+......      +-..+.+++|.||..-
T Consensus       193 ~~~v~a~~~~~~~~~~~d~~~~~l~~~~G~~~  224 (359)
T 3e18_A          193 VKSVSANLSFALGDEVDDGFVTFITFENGITA  224 (359)
T ss_dssp             EEEEEEEEECTTCCSSCSEEEEEEEETTSCEE
T ss_pred             CeEEEEEEEecCCCCCCceEEEEEEECCCCEE
Confidence            6776665432      2356888899988754

>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}

Probab=97.92  E-value=0.00029  Score=65.44  Aligned_cols=207  Identities=14%  Similarity=0.125  Sum_probs=132.4

Q ss_pred             CeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC-CCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK-PQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk-Pk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      +.||+|+|. |.+|. ..+..++. + +++|+|++- +|-+.+.+.+++|. ++                         +
T Consensus         4 ~~rvgiiG~-G~~~~~~~~~~l~~-~-~~~lvav~d-~~~~~~~~~a~~~~~~~-------------------------~   54 (336)
T 2p2s_A            4 KIRFAAIGL-AHNHIYDMCQQLID-A-GAELAGVFE-SDSDNRAKFTSLFPSVP-------------------------F   54 (336)
T ss_dssp             CCEEEEECC-SSTHHHHHHHHHHH-T-TCEEEEEEC-SCTTSCHHHHHHSTTCC-------------------------B
T ss_pred             ccEEEEECC-ChHHHHHhhhhhcC-C-CcEEEEEeC-CCHHHHHHHHHhcCCCc-------------------------c
Confidence            458999996 78886 45555543 4 699999765 45555555555552 21                         1


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeeccccee--ecccchhHHhhhcCCeEeec-----CC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI--AGGPFVLPLAHKHNIKILPA-----DS  226 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV--~aG~li~~~a~~~~~~IlPV-----DS  226 (353)
                      +   ..+.++++.+++|.|+.+..-..-...+.+|+++||.|.+ .|=.-.  .-..-+.++|+++|..+.--     +.
T Consensus        55 ~---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~-EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p  130 (336)
T 2p2s_A           55 A---ASAEQLITDASIDLIACAVIPCDRAELALRTLDAGKDFFT-AKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINV  130 (336)
T ss_dssp             C---SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTC
T ss_pred             c---CCHHHHhhCCCCCEEEEeCChhhHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCc
Confidence            1   1345666777899999998888788889999999998765 553222  22345677888888877632     55


Q ss_pred             c-hhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhc
Q 018600          227 E-HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLF  304 (353)
Q Consensus       227 E-HsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF  304 (353)
                      . +..+-+.|+.....+|..+-...   ++|..+             ..|+|-.-+.  -..+.|++-|--.|. ++|||
T Consensus       131 ~~~~~~~~~i~~g~iG~i~~v~~~~---~~~~~~-------------~~~~w~~~~~--~~gG~l~d~g~H~id~~~~l~  192 (336)
T 2p2s_A          131 DSALFAGELVQRGEIGRVIQTMGVG---PHRERG-------------ARPDWFYQKR--QYGGILCDIGIHQIEQFLYFT  192 (336)
T ss_dssp             HHHHHHHHHHHTTTTSSEEEEEEEE---ECBCCS-------------CCCGGGGCHH--HHCCHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCceEEEEEEc---cccCCC-------------CCCCceeccc--ccCCeeehhhhhHHHHHHHHh
Confidence            5 66777777655555666665432   222111             2466754322  134678888877777 68999


Q ss_pred             CCC-CCceEEEE----cC-----CcceEEEEEecCCcee
Q 018600          305 GAE-YDNIEIII----HP-----QSIIHSMVETQVLLYP  333 (353)
Q Consensus       305 ~i~-~d~IevvI----HP-----qSiIHsmVef~DGs~~  333 (353)
                      |-+ ++.+....    +|     .-..+.+++|.||..-
T Consensus       193 G~~~~~~v~a~~~~~~~~~~~~~~d~~~~~l~~~~G~~~  231 (336)
T 2p2s_A          193 GNTNARVVTSQTANYHHPHHPEFEDFGDAMLLGDNGATG  231 (336)
T ss_dssp             TCSCEEEEEEEEECSSCTTSTTCCSEEEEEEEETTSCEE
T ss_pred             CCCCceEEEEeEEeecCCCCCCccchheEEEEECCCcEE
Confidence            976 45555544    22     2356778899998643

>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}

Probab=97.90  E-value=0.0013  Score=60.69  Aligned_cols=193  Identities=19%  Similarity=0.220  Sum_probs=122.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .+.||+|+|+ |.||..-+..+.++| .++++++.. +|-+.+.    ++.-+ +                      .++
T Consensus         9 ~~~~igiIG~-G~~g~~~~~~l~~~~-~~~~v~v~d-~~~~~~~----~~~~~-~----------------------~~~   58 (315)
T 3c1a_A            9 SPVRLALIGA-GRWGKNYIRTIAGLP-GAALVRLAS-SNPDNLA----LVPPG-C----------------------VIE   58 (315)
T ss_dssp             CCEEEEEEEC-TTTTTTHHHHHHHCT-TEEEEEEEE-SCHHHHT----TCCTT-C----------------------EEE
T ss_pred             CcceEEEECC-cHHHHHHHHHHHhCC-CcEEEEEEe-CCHHHHH----HHHhh-C----------------------ccc
Confidence            3468999998 999999999998876 499999765 4555432    23222 1                      111


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeeccccee--ecccchhHHhhhcCCeEeec-----CCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI--AGGPFVLPLAHKHNIKILPA-----DSE  227 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV--~aG~li~~~a~~~~~~IlPV-----DSE  227 (353)
                         ..+.++++.+++|+|+.+..-..-..-...|+++||.|. ..|=.-.  ..+.-+.+++++++..+..-     +..
T Consensus        59 ---~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~-~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~  134 (315)
T 3c1a_A           59 ---SDWRSVVSAPEVEAVIIATPPATHAEITLAAIASGKAVL-VEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPA  134 (315)
T ss_dssp             ---SSTHHHHTCTTCCEEEEESCGGGHHHHHHHHHHTTCEEE-EESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHH
T ss_pred             ---CCHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHCCCcEE-EcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHH
Confidence               123455656689999999888777888899999999876 4553222  23445677888888776532     233


Q ss_pred             hhHHHHhhcCCCCCCcceEEEEe-cCCcCCCCChhhhhcCCHHHHhcCCCC-CCCCccceecccccchhHHHHH-hhhhc
Q 018600          228 HSAIFQCIQGLPEGALRRIILTA-SGGAFRDWPVEKLKEVKVADALKHPNW-SMGKKITVDSATLFNKGLEVIE-AHYLF  304 (353)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kIiLTA-SGGPFr~~~~e~l~~vT~~~ALkHPnW-~MG~KITIDSATmmNKgLEvIE-A~~LF  304 (353)
                      +..+-+.++  ...+|..+-... ..+|                      | ..|      .+.|++-|--.|. ++|||
T Consensus       135 ~~~~~~~i~--~lG~i~~v~~~~~~~~~----------------------~~~~g------gG~l~d~g~H~id~~~~l~  184 (315)
T 3c1a_A          135 WEALKADLT--SIGPILAVRSEAGNHGP----------------------YRPGG------VPMLWDWGAHDVSMVLDLM  184 (315)
T ss_dssp             HHHHHHTHH--HHCSEEEEEEEEEEECC----------------------CCTTC------CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--HcCCeEEEEEEEecCCC----------------------ccccC------CcchhhhhchHHHHHHHHh
Confidence            334444444  223455554443 2222                      3 111      3667787777666 58999


Q ss_pred             CCCCCceEEEEcC--------CcceEEEEEecCCce
Q 018600          305 GAEYDNIEIIIHP--------QSIIHSMVETQVLLY  332 (353)
Q Consensus       305 ~i~~d~IevvIHP--------qSiIHsmVef~DGs~  332 (353)
                      |-+++++......        +-..+.+++| ||..
T Consensus       185 G~~~~~v~a~~~~~~~~~~~~~d~~~~~l~~-~g~~  219 (315)
T 3c1a_A          185 GRDPDSTSASWAARGEKDGGEAGDVTLTLAF-STVE  219 (315)
T ss_dssp             SSCCSEEEEEEEEEEEETTEEEEEEEEEEEE-TTEE
T ss_pred             CCCCcEEEEEeEeecCCCCCCCceEEEEEEE-CCEE
Confidence            9767777766431        2346677888 7754

>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}

Probab=97.88  E-value=0.00012  Score=68.39  Aligned_cols=212  Identities=12%  Similarity=0.126  Sum_probs=131.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec---CCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG---SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag---sNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      |.||+|+|+ |.+|..-+..+   .+.++|+|++..   .+.+.+.+++++|....                       +
T Consensus         2 ~~rvgiiG~-G~~~~~~~~~l---~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~-----------------------~   54 (337)
T 3ip3_A            2 SLKICVIGS-SGHFRYALEGL---DEECSITGIAPGVPEEDLSKLEKAISEMNIKP-----------------------K   54 (337)
T ss_dssp             CEEEEEECS-SSCHHHHHTTC---CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCC-----------------------E
T ss_pred             ceEEEEEcc-chhHHHHHHhc---CCCcEEEEEecCCchhhHHHHHHHHHHcCCCC-----------------------c
Confidence            458999996 67777666665   457999999865   35677888887776421                       1


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceee--cccchhHHhhhcCCe--Eee-----
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIA--GGPFVLPLAHKHNIK--ILP-----  223 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~--aG~li~~~a~~~~~~--IlP-----  223 (353)
                      ++   ..+.++++.+++|.|+.+..-..-...+.+|+++||.|. .-|=.-..  -..-+.++|++++..  +..     
T Consensus        55 ~~---~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R  130 (337)
T 3ip3_A           55 KY---NNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAF-VEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIR  130 (337)
T ss_dssp             EC---SSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGG
T ss_pred             cc---CCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHhCCceEEEeccccc
Confidence            11   123444555679999988776666777899999999976 44533222  345567888888876  322     


Q ss_pred             cCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhh
Q 018600          224 ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHY  302 (353)
Q Consensus       224 VDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~  302 (353)
                      -+..+..+-++++.....+|..+-...+- ++..                .|.|-.-+  .-..+.|++-|.-.|. ++|
T Consensus       131 ~~p~~~~~k~~i~~g~iG~i~~i~~~~~~-~~~~----------------~~~~~~~~--~~~gG~l~d~g~H~iD~~~~  191 (337)
T 3ip3_A          131 YRPHFLTAKKLVSEGAVGEIRLVNTQKSY-KLGQ----------------RPDFYKKR--ETYGGTIPWVGIHAIDWIHW  191 (337)
T ss_dssp             GSHHHHHHHHHHHHTTTSSEEEEEEEEEB-CCCS----------------CCGGGGSH--HHHCCHHHHTTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCccceEEEEEEecc-cCCC----------------Ccchhhcc--cccCCchhhcchHHHHHHHH
Confidence            24445566666654455566665544332 1111                23442111  1124567777665554 589


Q ss_pred             hcCCCCCceEEEEcC---------CcceEEEEEecCCceeeeee
Q 018600          303 LFGAEYDNIEIIIHP---------QSIIHSMVETQVLLYPVVML  337 (353)
Q Consensus       303 LF~i~~d~IevvIHP---------qSiIHsmVef~DGs~~~~~~  337 (353)
                      |||-+++++......         +-..+.+++|.||..-....
T Consensus       192 l~G~~~~~V~a~~~~~~~~~~~~~~d~~~~~l~~~~G~~~~~~~  235 (337)
T 3ip3_A          192 ITGKKFLSVYATHSRLHNSGHGELETTALCHFTLENEVFASLSI  235 (337)
T ss_dssp             HHCCCEEEEEEEEECTTCTTCTTCCSEEEEEEEEGGGEEEEEEE
T ss_pred             hcCCCceEEEEEecccccCCCCCcceEEEEEEEECCCcEEEEEE
Confidence            999777777665321         23578889999987544433

>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*

Probab=97.85  E-value=0.00034  Score=68.25  Aligned_cols=217  Identities=17%  Similarity=0.172  Sum_probs=138.4

Q ss_pred             CCCeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE--EEEeCccchHHHHHHhhcCCCC
Q 018600           74 DGPKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV--VAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~--V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      +.+.||+|+|. |.||+ .-+..+.+++ +++|++++ ..|-+.+.+.+++|....  +.                    
T Consensus        81 ~~~irigiIG~-G~~g~~~~~~~l~~~~-~~~lvav~-d~~~~~~~~~a~~~g~~~~~~~--------------------  137 (433)
T 1h6d_A           81 DRRFGYAIVGL-GKYALNQILPGFAGCQ-HSRIEALV-SGNAEKAKIVAAEYGVDPRKIY--------------------  137 (433)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHTTTCS-SEEEEEEE-CSCHHHHHHHHHHTTCCGGGEE--------------------
T ss_pred             CCceEEEEECC-cHHHHHHHHHHHhhCC-CcEEEEEE-cCCHHHHHHHHHHhCCCccccc--------------------
Confidence            34568999998 99997 7888888765 59999976 457777777777775321  11                    


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEeec----
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA----  224 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlPV----  224 (353)
                        ++   +.+.+++..+++|.|+.+..-..-..-+..|+++||.|.+ -|=.-  +.-..-+.+++++++..+.--    
T Consensus       138 --~~---~~~~~ll~~~~vD~V~iatp~~~h~~~~~~al~aGk~Vl~-EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R  211 (433)
T 1h6d_A          138 --DY---SNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMC-EKPMATSVADCQRMIDAAKAANKKLMIGYRCH  211 (433)
T ss_dssp             --CS---SSGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSSCCSSHHHHHHHHHHHHHHTCCEEECCGGG
T ss_pred             --cc---CCHHHHhcCCCCCEEEEcCCchhHHHHHHHHHHCCCcEEE-cCCCCCCHHHHHHHHHHHHHhCCeEEEEechh
Confidence              11   1234456667899999998888888889999999998765 45221  122345677888888776532    


Q ss_pred             -CCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCC-CCCCCccceecccccchhHHHHH-hh
Q 018600          225 -DSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPN-WSMGKKITVDSATLFNKGLEVIE-AH  301 (353)
Q Consensus       225 -DSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPn-W~MG~KITIDSATmmNKgLEvIE-A~  301 (353)
                       +..+..+-++|+.....+|..+....+- +++...        +      .+ |..-+.. -..+.|++-|.-.|. ++
T Consensus       212 ~~p~~~~~k~~i~~G~iG~i~~v~~~~~~-~~~~~~--------~------~~~wr~~~~~-~gGG~l~d~g~H~lD~~~  275 (433)
T 1h6d_A          212 YDPMNRAAVKLIRENQLGKLGMVTTDNSD-VMDQND--------P------AQQWRLRREL-AGGGSLMDIGIYGLNGTR  275 (433)
T ss_dssp             GCHHHHHHHHHHHTTSSCSEEEEEEEEEC-CCCTTS--------H------HHHGGGCHHH-HSSSHHHHTHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHcCCCCCcEEEEEEEec-ccccCC--------C------Cccccccccc-CCCCceecccchHHHHHH
Confidence             4556667777765555667666554322 211111        1      12 6421111 023557777766666 58


Q ss_pred             hhcCCCCCceEEEEc-C---------CcceEEEEEecCCceeee
Q 018600          302 YLFGAEYDNIEIIIH-P---------QSIIHSMVETQVLLYPVV  335 (353)
Q Consensus       302 ~LF~i~~d~IevvIH-P---------qSiIHsmVef~DGs~~~~  335 (353)
                      ||||-+++++...+. +         +-..+.+++|.||..-..
T Consensus       276 ~l~G~~p~~V~a~~~~~~~~~~~~~veD~~~~~l~f~~G~~~~l  319 (433)
T 1h6d_A          276 YLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQMRFRSGALSHG  319 (433)
T ss_dssp             HHHTSCEEEEEEEEECCTTCGGGSSSCSEEEEEEEETTSCEEEE
T ss_pred             HHcCCCCEEEEEEecccCCCccccccCceEEEEEEECCCCEEEE
Confidence            999987777777632 1         124778889999875443

>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}

Probab=97.76  E-value=0.001  Score=62.68  Aligned_cols=207  Identities=16%  Similarity=0.203  Sum_probs=127.4

Q ss_pred             CCeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .+.||+|+|. |.||+. .+..++++|+ ++|+|++-.+ -+++   +++|.                        .+++
T Consensus         4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~-~~l~av~d~~-~~~~---~~~~~------------------------~~~~   53 (362)
T 3fhl_A            4 EIIKTGLAAF-GMSGQVFHAPFISTNPH-FELYKIVERS-KELS---KERYP------------------------QASI   53 (362)
T ss_dssp             CCEEEEESCC-SHHHHHTTHHHHHHCTT-EEEEEEECSS-CCGG---GTTCT------------------------TSEE
T ss_pred             CceEEEEECC-CHHHHHHHHHHHhhCCC-eEEEEEEcCC-HHHH---HHhCC------------------------CCce
Confidence            3568999997 999996 7888888865 9999987543 2221   11121                        2333


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc--eeecccchhHHhhhcCCeEee-----cCC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILP-----ADS  226 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES--LV~aG~li~~~a~~~~~~IlP-----VDS  226 (353)
                      +.   .+.+++..+++|.|+.+..-..-...+.+|+++||.|.+- |=.  =+.-..-+.++|+++|..+.-     -+.
T Consensus        54 ~~---~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~E-KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p  129 (362)
T 3fhl_A           54 VR---SFKELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVE-KPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDA  129 (362)
T ss_dssp             ES---CSHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE-SSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSH
T ss_pred             EC---CHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEe-cCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCH
Confidence            32   3456667788999999998888888899999999988752 211  011234466788888876652     244


Q ss_pred             chhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcC
Q 018600          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (353)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (353)
                      .+..+-++++.....+|..+-.+-+  -++..             ....+|..-+.  -..+.|++-|.-.|. +.||||
T Consensus       130 ~~~~~k~~i~~G~iG~i~~v~~~~~--~~~~~-------------~~~~~w~~~~~--~ggG~l~d~g~H~id~~~~l~G  192 (362)
T 3fhl_A          130 DFLTVRDILAKSLLGRLVEYESTFA--RYRNF-------------IKPNTWKETGE--SGGGLTYNLGSHLIDQAIQLFG  192 (362)
T ss_dssp             HHHHHHHHHHTTTTSSEEEEEEEEE--CBCCC-----------------------------CHHHHTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCCCeEEEEEEec--ccCCC-------------CCccccccCCC--CCCceeeeehhhHHHHHHHHhC
Confidence            4455666665544556666544422  11111             01123754332  346788888776666 579999


Q ss_pred             CCCCceEEEEcC-------CcceEEEEEecC---Ccee
Q 018600          306 AEYDNIEIIIHP-------QSIIHSMVETQV---LLYP  333 (353)
Q Consensus       306 i~~d~IevvIHP-------qSiIHsmVef~D---Gs~~  333 (353)
                       +++.+......       .-..+.+++|.|   |..-
T Consensus       193 -~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~~~~G~~~  229 (362)
T 3fhl_A          193 -MPEAVFADLGILREGGKVDDYFIIHLLHPSLAPNVKI  229 (362)
T ss_dssp             -CEEEEEEEEECCSTTCCSCCEEEEEEEEETTSTTSEE
T ss_pred             -CCcEEEEEEEEeCCCCCcceEEEEEEEECCCCCCeEE
Confidence             78888877642       346788899998   7553

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=97.74  E-value=0.0026  Score=59.97  Aligned_cols=201  Identities=16%  Similarity=0.256  Sum_probs=127.5

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+|. |+||.. .+..++++|+ ++|+|++. +|-+++   .++|.                        +++++
T Consensus         5 ~~rvgiiG~-G~~g~~~~~~~l~~~~~-~~l~av~d-~~~~~~---~~~~~------------------------~~~~~   54 (358)
T 3gdo_A            5 TIKVGILGY-GLSGSVFHGPLLDVLDE-YQISKIMT-SRTEEV---KRDFP------------------------DAEVV   54 (358)
T ss_dssp             CEEEEEECC-SHHHHHTTHHHHTTCTT-EEEEEEEC-SCHHHH---HHHCT------------------------TSEEE
T ss_pred             cceEEEEcc-CHHHHHHHHHHHhhCCC-eEEEEEEc-CCHHHH---HhhCC------------------------CCceE
Confidence            568999997 999997 7888888865 99999864 455442   22331                        12222


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeeccc--ceeecccchhHHhhhcCCeEee-----cCCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE--TLIAGGPFVLPLAHKHNIKILP-----ADSE  227 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKE--SLV~aG~li~~~a~~~~~~IlP-----VDSE  227 (353)
                         ..+.+++..+++|.|+.+..-..-..-+.+|+++||.|.+ -|=  .=+.-..-+.++|+++|..+..     -+..
T Consensus        55 ---~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~  130 (358)
T 3gdo_A           55 ---HELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVM-EKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDND  130 (358)
T ss_dssp             ---SSTHHHHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEE-ESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHH
T ss_pred             ---CCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEE-ecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHH
Confidence               1335566778899999999888888899999999999876 332  1122345567888888876643     2444


Q ss_pred             hhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCC
Q 018600          228 HSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGA  306 (353)
Q Consensus       228 HsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i  306 (353)
                      +..+-++++.....+|..+-..-  +-++..+              .+.|..=+  .-..+.|++-|.-.|. ++|||| 
T Consensus       131 ~~~~k~~i~~g~iG~i~~~~~~~--~~~~~~~--------------~~~w~~~~--~~ggG~l~d~g~H~id~~~~l~G-  191 (358)
T 3gdo_A          131 FLTIKKLISEGSLEDINTYQVSY--NRYRPEV--------------QARWREKE--GTATGTLYDLGSHIIDQTLHLFG-  191 (358)
T ss_dssp             HHHHHHHHHTTSSCSCCEEEEEC--CCBCCCC--------------------------CCSHHHHTHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHhcCCCCceEEEEEEE--eccCCCC--------------CcccccCC--CCCCceeeeehhHHHHHHHHHcC-
Confidence            55666666655555676655432  2222111              13475321  2245778888776666 579999 


Q ss_pred             CCCceEEEEcC-------CcceEEEEEecC
Q 018600          307 EYDNIEIIIHP-------QSIIHSMVETQV  329 (353)
Q Consensus       307 ~~d~IevvIHP-------qSiIHsmVef~D  329 (353)
                      +++.+......       .-..+.+++|.|
T Consensus       192 ~~~~V~a~~~~~~~~~~~~d~~~~~l~~~~  221 (358)
T 3gdo_A          192 MPKAVTANVMAQRENAETVDYFHLTLDYGK  221 (358)
T ss_dssp             CCSEEEEEEECCSTTCCSCCEEEEEEEETT
T ss_pred             CCeEEEEEEEeecCCCCcCceEEEEEEECC
Confidence            88888887542       235677888877

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=97.74  E-value=0.00021  Score=66.42  Aligned_cols=210  Identities=14%  Similarity=0.126  Sum_probs=130.0

Q ss_pred             CCCeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           74 DGPKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      ..|.||+|+|+ |.||+. .+..+++.|+ ++|+|++ .+|.++..+.+++|.-..++                      
T Consensus        21 ~~mirigiIG~-G~ig~~~~~~~~~~~~~-~~lvav~-d~~~~~a~~~a~~~g~~~~y----------------------   75 (350)
T 4had_A           21 QSMLRFGIIST-AKIGRDNVVPAIQDAEN-CVVTAIA-SRDLTRAREMADRFSVPHAF----------------------   75 (350)
T ss_dssp             -CCEEEEEESC-CHHHHHTHHHHHHHCSS-EEEEEEE-CSSHHHHHHHHHHHTCSEEE----------------------
T ss_pred             cCccEEEEEcC-hHHHHHHHHHHHHhCCC-eEEEEEE-CCCHHHHHHHHHHcCCCeee----------------------
Confidence            45679999995 999976 5889998875 9999976 56889988888888743322                      


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cC
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----AD  225 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VD  225 (353)
                           ..+.++++.+++|.|+.+..=..=...+.+|+++||.|.+ =|=.=  +.-..-+.++|++++..+..     -+
T Consensus        76 -----~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~  149 (350)
T 4had_A           76 -----GSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVC-EKPLALKAGDIDAVIAARDRNKVVVTEAYMITYS  149 (350)
T ss_dssp             -----SSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGS
T ss_pred             -----CCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEE-eCCcccchhhHHHHHHHHHHcCCceeEeeeeecC
Confidence                 1234556678899999998877778889999999999864 11110  12245567788888876542     24


Q ss_pred             CchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhc
Q 018600          226 SEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLF  304 (353)
Q Consensus       226 SEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF  304 (353)
                      ..+..+-++|+.....+|..+-..-  +-++ .+              .++|..-++  ...+.|++-|-=.|- ++|||
T Consensus       150 p~~~~~k~~i~~G~iG~i~~i~~~~--~~~~-~~--------------~~~~~~~~~--~gGG~l~d~g~H~id~~~~l~  210 (350)
T 4had_A          150 PVWQKVRSLIDEGAIGSLRHVQGAF--TYFN-RD--------------ASNMRNIPE--LGGGGLPDIGVYPVMSTRFST  210 (350)
T ss_dssp             HHHHHHHHHHHTTTTSSEEEEEEEE--EEEC-CC--------------C--------------CCHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhHhhhcCCCCcceeeeEEE--eecc-cc--------------cccccCChh--hcCCcccCCceehhHHHHHHc
Confidence            5556666677654445555443221  1111 00              012221111  123456666654443 57899


Q ss_pred             CCCCCceEEEEc--CCc----ceEEEEEecCCcee
Q 018600          305 GAEYDNIEIIIH--PQS----IIHSMVETQVLLYP  333 (353)
Q Consensus       305 ~i~~d~IevvIH--PqS----iIHsmVef~DGs~~  333 (353)
                      |-++.++.....  |+.    ..+.+++|.||..-
T Consensus       211 G~~~~~V~a~~~~~~~~~~d~~~~~~l~~~~g~~~  245 (350)
T 4had_A          211 GKEPLRIQANTERDPDFGTDIYSSVKADFDDFELS  245 (350)
T ss_dssp             CCCCSEEEEEEEECTTTCCEEEEEEEEECSSCEEE
T ss_pred             CCCceEEEEEEEEcCCCCceEEEEEEEEECCEEEE
Confidence            977777765543  332    34667788888653

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=97.71  E-value=0.0002  Score=67.01  Aligned_cols=211  Identities=11%  Similarity=0.052  Sum_probs=129.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .|.||+|+|+.|+||..-+..+++.  .++|+|++-.+ -+. .+..++| |.                       ++++
T Consensus         2 ~mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~-~~~-~~~~~~~-~~-----------------------~~~~   53 (318)
T 3oa2_A            2 HMKNFALIGAAGYIAPRHMRAIKDT--GNCLVSAYDIN-DSV-GIIDSIS-PQ-----------------------SEFF   53 (318)
T ss_dssp             -CCEEEEETTTSSSHHHHHHHHHHT--TCEEEEEECSS-CCC-GGGGGTC-TT-----------------------CEEE
T ss_pred             CceEEEEECCCcHHHHHHHHHHHhC--CCEEEEEEcCC-HHH-HHHHhhC-CC-----------------------CcEE
Confidence            4679999999999999999999986  58999977433 221 1112222 21                       2333


Q ss_pred             ecHHHHHH----Hh--cCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc--eeecccchhHHhhhcCCeEee---
Q 018600          155 AGEQGVIE----AA--RHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILP---  223 (353)
Q Consensus       155 ~G~~gl~~----~a--~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES--LV~aG~li~~~a~~~~~~IlP---  223 (353)
                      ...+.+.+    +.  ..+++|.|+.+..-..=..-+.+|+++||.|.+= |=.  =+.-..-+.++++++|..+..   
T Consensus        54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~E-KPla~~~~ea~~l~~~a~~~g~~~~v~~~  132 (318)
T 3oa2_A           54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICE-KPLVPTPEMLDQLAVIERETDKRLYNILQ  132 (318)
T ss_dssp             SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTCEEEEC-SSCCSCHHHHHHHHHHHHHHTCCEEECCG
T ss_pred             CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCCeEEEE-CCCcCCHHHHHHHHHHHHHhCCEEEEEEh
Confidence            33333332    11  3678999999988888888899999999998642 211  112244566788888876543   


Q ss_pred             --cCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-h
Q 018600          224 --ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-A  300 (353)
Q Consensus       224 --VDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A  300 (353)
                        -+.....+-+.+......+|..+-.+-..  .|  +..           ...+|..=+.  ...+.|+|-|--.|. +
T Consensus       133 ~R~~p~~~~~k~~i~~g~iG~i~~v~~~~~~--~~--~~~-----------~~~~w~~~~~--~~gG~l~d~g~H~id~~  195 (318)
T 3oa2_A          133 LRHHQAIIALKDKVAREKSPHKYEVDLTYIT--SR--GNW-----------YLKSWKGDPR--KSFGVATNIGVHFYDML  195 (318)
T ss_dssp             GGGCHHHHHHHHHHHHS-CSSCEEEEEEEEE--CC--CHH-----------HHHSGGGCHH--HHCCHHHHHHHHHHHHH
T ss_pred             hhcCHHHHHHHHHHhcCCCCceEEEEEEEEe--cC--CCC-----------CCcccccCCC--cCCCccccCCcHHHHHH
Confidence              23344445555554344556666554321  11  100           0134653222  134678888766665 5


Q ss_pred             hhhcCCCCCceEEEEcCCcceEEEEEecCCce
Q 018600          301 HYLFGAEYDNIEIIIHPQSIIHSMVETQVLLY  332 (353)
Q Consensus       301 ~~LF~i~~d~IevvIHPqSiIHsmVef~DGs~  332 (353)
                      +||||-+ ..+.+-+..+-..+.+++|.||..
T Consensus       196 ~~l~G~~-~~v~~~~~~~d~~~~~l~~~~g~~  226 (318)
T 3oa2_A          196 HFIFGKL-QRNVVHFTSEYKTAGYLEYEQARV  226 (318)
T ss_dssp             HHHHCSE-EEEEEEEECSSEEEEEEEETTEEE
T ss_pred             HHHhCCC-ceEEEEecCCcEEEEEEEeCCCeE
Confidence            7899964 456666777778888888888864

>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*

Probab=97.71  E-value=6.6e-05  Score=72.75  Aligned_cols=149  Identities=20%  Similarity=0.213  Sum_probs=95.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      +.||+|+| +|.||+..++.+++++  .+++|++++..+.        +.|..++-.+   ..+..+.+.+.+. .+  .
T Consensus         4 ~i~vgIiG-~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--------~~~~~~~~gi---~~~~~~~e~l~~~-~~--~   68 (358)
T 1ebf_A            4 VVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAER--------SLISKDFSPL---NVGSDWKAALAAS-TT--K   68 (358)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSB--------EEECSSCSCC---SCTTCHHHHHHTC-CC--B
T ss_pred             eEEEEEEe-cCHHHHHHHHHHHhcCCCCCEEEEEEEECCh--------hhhccccCCC---CccccHHHHHhcc-cC--C
Confidence            45899999 5999999999999986  3699999986421        1122221000   1123344444321 00  1


Q ss_pred             EecHHHHHHH-hcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeeccccee---ecccchhHHhhhcCCeEe-------
Q 018600          154 LAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI---AGGPFVLPLAHKHNIKIL-------  222 (353)
Q Consensus       154 ~~G~~gl~~~-a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV---~aG~li~~~a~~~~~~Il-------  222 (353)
                      ...-+.+.+. ......|+||.+..+..-......|+++||.|..|||+-+-   .-++-+. +|+++|+.++       
T Consensus        69 ~~did~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~-~A~~~gv~~~~Ea~vg~  147 (358)
T 1ebf_A           69 TLPLDDLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALF-SNKPTNGFVYHEATVGA  147 (358)
T ss_dssp             CCCHHHHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHT-CCCTTCCCEECGGGTTT
T ss_pred             CCCHHHHHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHH-HHHHcCCEEEEcccccc
Confidence            1122344443 23345699999988764333446899999999999999887   5567777 9999998775       


Q ss_pred             --ecCCchhHHHHhh-cCCCCCCcceE
Q 018600          223 --PADSEHSAIFQCI-QGLPEGALRRI  246 (353)
Q Consensus       223 --PVDSEHsAIfQ~L-~g~~~~~v~kI  246 (353)
                        |+   ...+-++| .|.   .|.+|
T Consensus       148 giPi---i~~l~~~l~~G~---~I~~I  168 (358)
T 1ebf_A          148 GLPI---ISFLREIIQTGD---EVEKI  168 (358)
T ss_dssp             TSSC---HHHHHHHHHHTC---CEEEE
T ss_pred             CCcH---HHHHHHHHHcCC---CeEEE
Confidence              63   67777888 565   35544

>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}

Probab=97.69  E-value=0.00071  Score=63.29  Aligned_cols=203  Identities=17%  Similarity=0.211  Sum_probs=124.4

Q ss_pred             CeeEEEEecCChHhHH-HHH-HHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQ-TLD-IVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtq-TLd-VI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      |.||+|+|. |.||+. .+. ++.+.| +++|+|+.-.+ -+.. +...++.                        ++++
T Consensus         2 ~~rvgiiG~-G~~g~~~~~~~~~~~~~-~~~l~av~d~~-~~~~-~~~~~~~------------------------~~~~   53 (345)
T 3f4l_A            2 VINCAFIGF-GKSTTRYHLPYVLNRKD-SWHVAHIFRRH-AKPE-EQAPIYS------------------------HIHF   53 (345)
T ss_dssp             CEEEEEECC-SHHHHHHTHHHHTTCTT-TEEEEEEECSS-CCGG-GGSGGGT------------------------TCEE
T ss_pred             ceEEEEEec-CHHHHHHHHHHHHhcCC-CeEEEEEEcCC-HhHH-HHHHhcC------------------------CCce
Confidence            458999997 999985 677 556554 69999987543 2222 2222221                        1223


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc--eeecccchhHHhhhcCCeEee-----cCC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILP-----ADS  226 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES--LV~aG~li~~~a~~~~~~IlP-----VDS  226 (353)
                      +   ..+.+++..+++|.|+.+..-..-...+..|+++||.|.+- |=.  =+.-..-+.++++++|..+..     -+.
T Consensus        54 ~---~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~E-KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p  129 (345)
T 3f4l_A           54 T---SDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVE-KPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDS  129 (345)
T ss_dssp             E---SCTHHHHTCTTEEEEEECSCGGGHHHHHHHHHHTTCEEEEC-SSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCH
T ss_pred             E---CCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHcCCcEEEe-CCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCH
Confidence            2   23455667778999999988888888899999999998763 311  122244466788888876652     233


Q ss_pred             chhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcC
Q 018600          227 EHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFG  305 (353)
Q Consensus       227 EHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~  305 (353)
                      .+..+-++++.....+|..+  ++.-+.++                  |.|..-.+ .-..+.|++-|.-.|. ++||||
T Consensus       130 ~~~~~~~~i~~g~iG~i~~~--~~~~~~~~------------------~~~~~~~~-~~~gG~l~d~g~H~id~~~~l~G  188 (345)
T 3f4l_A          130 CFLTAKKAIESGKLGEIVEV--ESHFDYYR------------------PVAETKPG-LPQDGAFYGLGVHTMDQIISLFG  188 (345)
T ss_dssp             HHHHHHHHHHHSTTCSEEEE--EEECCCBC------------------CCCCCCCC-CGGGSHHHHTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCCeEEE--EEEeeccC------------------CccccCCC-CCCCchhheehHHHHHHHHHHhC
Confidence            34455556653334455444  33322222                  22211111 1234678888877776 589999


Q ss_pred             CCCCceEEEEcC-------CcceEEEEEecCCce
Q 018600          306 AEYDNIEIIIHP-------QSIIHSMVETQVLLY  332 (353)
Q Consensus       306 i~~d~IevvIHP-------qSiIHsmVef~DGs~  332 (353)
                       +++.+......       +-..+.+++|.||..
T Consensus       189 -~~~~v~a~~~~~~~~~~~~d~~~~~l~~~~~~~  221 (345)
T 3f4l_A          189 -RPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKA  221 (345)
T ss_dssp             -SCSEEEEEEECCSCTTSSCCEEEEEEEETTEEE
T ss_pred             -CCeEEEEEEEEecCCCCcceEEEEEEEECCEEE
Confidence             56777775432       346788888888653

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.64  E-value=0.00073  Score=65.62  Aligned_cols=157  Identities=14%  Similarity=0.140  Sum_probs=96.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC----CEEE-EeCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP----QVVA-VRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP----k~V~-i~de~~~~~l~~~l~~~~~~  150 (353)
                      |+||+|+|+ |.||+...+-+.++++-|..+.+ +.+|.+++.+.++++..    +.-. ..|-...+.+          
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v-~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l----------   68 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITL-ASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEEL----------   68 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEE-EESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHH----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEE-EECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHH----------
Confidence            578999999 99999999999998875433443 35788888887777642    2222 2233333333          


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe-eeccccee----ecc--cchhHHhhhcCCeEee
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA-LANKETLI----AGG--PFVLPLAHKHNIKILP  223 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia-LANKESLV----~aG--~li~~~a~~~~~~IlP  223 (353)
                                .++.+..++|+|+++..-+....-..+++++|+.+. +++=+..-    ...  .-+.+.|++.|+.+++
T Consensus        69 ----------~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~  138 (405)
T 4ina_A           69 ----------VALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALL  138 (405)
T ss_dssp             ----------HHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEE
T ss_pred             ----------HHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEE
Confidence                      333333368999998655445555678899999977 66643321    011  2467788888988876


Q ss_pred             ---cCCchhHHHHhh-cCCCCCCcceEEEE-ecCCc
Q 018600          224 ---ADSEHSAIFQCI-QGLPEGALRRIILT-ASGGA  254 (353)
Q Consensus       224 ---VDSEHsAIfQ~L-~g~~~~~v~kIiLT-ASGGP  254 (353)
                         .|.=-+.++-.. .++-.++++.|.+. .+||+
T Consensus       139 g~G~~PG~~~l~a~~~~~~~~~~i~~i~i~~~~gg~  174 (405)
T 4ina_A          139 GSGFDPGVTNVFCAYAQKHYFDEIHEIDILDCNAGD  174 (405)
T ss_dssp             CCBTTTBHHHHHHHHHHHHTCSEEEEEEEEEEECCB
T ss_pred             cCCCCccHHHHHHHHHHHhccCcccEEEEEEecCCC
Confidence               555555544322 11112457766664 44554

>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*

Probab=97.61  E-value=0.00077  Score=65.67  Aligned_cols=149  Identities=13%  Similarity=0.125  Sum_probs=101.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e---FkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      .+.||+|+| +|.||+.-+..+.++| .++|+|++ .+|-+.+.+.+++   +...                      .+
T Consensus        19 ~~~rvgiIG-~G~~g~~h~~~l~~~~-~~~lvav~-d~~~~~~~~~a~~~~~~g~~----------------------~~   73 (444)
T 2ixa_A           19 KKVRIAFIA-VGLRGQTHVENMARRD-DVEIVAFA-DPDPYMVGRAQEILKKNGKK----------------------PA   73 (444)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHTCT-TEEEEEEE-CSCHHHHHHHHHHHHHTTCC----------------------CC
T ss_pred             CCceEEEEe-cCHHHHHHHHHHHhCC-CcEEEEEE-eCCHHHHHHHHHHHHhcCCC----------------------CC
Confidence            456899999 6999999999998876 49999976 4566666555443   2210                      12


Q ss_pred             EEEe-cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEeec----
Q 018600          152 EILA-GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA----  224 (353)
Q Consensus       152 ~v~~-G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlPV----  224 (353)
                      +++. |++.+.++++.+++|.|+.+..-..-..-+.+|+++||.|.+- |=.-  +.-..-+.++|+++|..+...    
T Consensus        74 ~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~E-KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r  152 (444)
T 2ixa_A           74 KVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGKIVGME-VSGAITLEECWDYVKVSEQTGVPLMALENVC  152 (444)
T ss_dssp             EEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEC-CCCCSSHHHHHHHHHHHHHHCCCEEECCGGG
T ss_pred             ceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEe-CCCcCCHHHHHHHHHHHHHhCCeEEEEeccc
Confidence            2332 3445677787788999999998888888899999999988763 4211  223345677888888776542    


Q ss_pred             -CCchhHHHHhhcCCCCCCcceEEEE
Q 018600          225 -DSEHSAIFQCIQGLPEGALRRIILT  249 (353)
Q Consensus       225 -DSEHsAIfQ~L~g~~~~~v~kIiLT  249 (353)
                       +..+..+-++++.....+|..+-.+
T Consensus       153 ~~p~~~~~~~~i~~G~iG~i~~v~~~  178 (444)
T 2ixa_A          153 YRRDVMAILNMVRKGMFGELVHGTGG  178 (444)
T ss_dssp             GCHHHHHHHHHHHTTTTCSEEEEEEC
T ss_pred             cCHHHHHHHHHHHcCCCCCeEEEEEE
Confidence             3455666666765445566665544

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=97.58  E-value=0.00033  Score=66.99  Aligned_cols=213  Identities=17%  Similarity=0.159  Sum_probs=135.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-------CceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE-------DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p-------d~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~  149 (353)
                      -||+|+| +|.||+.-+..+++.|       ++++|+|++ ..|-+.+.+.+++|....++                   
T Consensus        27 lrvgiIG-~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~-d~~~~~a~~~a~~~~~~~~y-------------------   85 (412)
T 4gqa_A           27 LNIGLIG-SGFMGQAHADAYRRAAMFYPDLPKRPHLYALA-DQDQAMAERHAAKLGAEKAY-------------------   85 (412)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEE-CSSHHHHHHHHHHHTCSEEE-------------------
T ss_pred             ceEEEEc-CcHHHHHHHHHHHhccccccccCCCeEEEEEE-cCCHHHHHHHHHHcCCCeEE-------------------
Confidence            4899999 5999999888888754       578999976 56888888888888643322                   


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc--eeecccchhHHhhhcCCeEee----
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKILP----  223 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES--LV~aG~li~~~a~~~~~~IlP----  223 (353)
                              ..+.++++.+++|.|+.+..-..=...+.+|+++||.|.+= |=.  =+.-..-+.++|++++..+.-    
T Consensus        86 --------~d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~E-KP~a~~~~ea~~l~~~a~~~g~~~~v~~~~  156 (412)
T 4gqa_A           86 --------GDWRELVNDPQVDVVDITSPNHLHYTMAMAAIAAGKHVYCE-KPLAVNEQQAQEMAQAARRAGVKTMVAFNN  156 (412)
T ss_dssp             --------SSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEE-SCSCSSHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred             --------CCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHcCCCeEee-cCCcCCHHHHHHHHHHHHHhCCeeeeccce
Confidence                    12355566788999999988888889999999999998641 111  011234456778888766542    


Q ss_pred             -cCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hh
Q 018600          224 -ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AH  301 (353)
Q Consensus       224 -VDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~  301 (353)
                       -+..+..+-+.++.....+|..+-.+-+.+.+++.             -...+|..=+... -++.|++.|-=.|- ++
T Consensus       157 R~~p~~~~~k~~i~~G~iG~i~~~~~~~~~~~~~~~-------------~~~~~wr~~~~~~-GgG~l~d~g~H~iD~~~  222 (412)
T 4gqa_A          157 IKTPAALLAKQIIARGDIGEPVRFRGTFDQGFYNDP-------------NLPWSWRCSKTLG-GSGALGDLGAHTLSVAQ  222 (412)
T ss_dssp             GTSHHHHHHHHHHHHTTTCSEEEEEEEEECCSTTST-------------TSCCCGGGCTTTT-CCSHHHHTHHHHHHHHH
T ss_pred             ecCHHHHHHHHHHhcCCcCCeEEEEEEeccccccCC-------------CCCccceeccccC-CCcchhhhhhhHHHHHH
Confidence             23334445555554445566666665554433321             1123554322211 14567887755553 57


Q ss_pred             hhcCCCCCceEEEEc---C--------------------------CcceEEEEEecCCceee
Q 018600          302 YLFGAEYDNIEIIIH---P--------------------------QSIIHSMVETQVLLYPV  334 (353)
Q Consensus       302 ~LF~i~~d~IevvIH---P--------------------------qSiIHsmVef~DGs~~~  334 (353)
                      |||| +++.+.+...   +                          +-.++.+++|.+|..-.
T Consensus       223 ~l~G-~~~~V~a~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~eD~~~~~l~f~~G~~~~  283 (412)
T 4gqa_A          223 FLLG-GIREVTASAQTCLRQRPVPQRDAGYASRVAADAEWREVENDDQVQCLVNFDSGAAGV  283 (412)
T ss_dssp             HHHC-CEEEEEEEEECCSCEEECC------------CCCEEECCSCSEEEEEEEETTSCEEE
T ss_pred             HHhC-CCeEEEEEEEecccccccccccccccccccccccccccccceEEEEEEEeCCCcEEE
Confidence            9998 4455544321   1                          12467888999987643

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=97.56  E-value=0.00024  Score=65.78  Aligned_cols=185  Identities=19%  Similarity=0.199  Sum_probs=114.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC------CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEH------EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~------pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~  149 (353)
                      |-||+|+| +|+||+.=+..+++.      .++++|+|++ ..|-+.+.+.+++|....++                   
T Consensus        25 kirvgiIG-~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~-d~~~~~a~~~a~~~g~~~~y-------------------   83 (393)
T 4fb5_A           25 PLGIGLIG-TGYMGKCHALAWNAVKTVFGDVERPRLVHLA-EANAGLAEARAGEFGFEKAT-------------------   83 (393)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEE-CC--TTHHHHHHHHTCSEEE-------------------
T ss_pred             CccEEEEc-CCHHHHHHHHHHHhhhhhhccCCCcEEEEEE-CCCHHHHHHHHHHhCCCeec-------------------
Confidence            34899999 699998655554443      3578999976 45677777788888643322                   


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee----
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP----  223 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP----  223 (353)
                              ..+.++++.+++|.|+.+..=..=...+.+|+++||.|.+ =|=.-  +.-..-+.++|++++..+..    
T Consensus        84 --------~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~  154 (393)
T 4fb5_A           84 --------ADWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWC-EKPMAPAYADAERMLATAERSGKVAALGYNY  154 (393)
T ss_dssp             --------SCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHSSSCEEECCGG
T ss_pred             --------CCHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEE-ccCCcccHHHHHHhhhhHHhcCCcccccccc
Confidence                    1234556678899999999888888999999999998865 22111  11244566788888876542    


Q ss_pred             -cCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hh
Q 018600          224 -ADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AH  301 (353)
Q Consensus       224 -VDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~  301 (353)
                       -+..+..+-+.++.....+|..+-.+-+.+ ++..+.            ....|.  .+..-..+.|++-|--.|- ++
T Consensus       155 R~~p~~~~~k~~i~~G~iG~i~~v~~~~~~~-~~~~~~------------~~~~~~--~~~~~ggG~l~d~g~H~iD~~~  219 (393)
T 4fb5_A          155 IQNPVMRHIRKLVGDGVIGRVNHVRVEMDED-FMADPD------------IFFYWK--SELSAGYGALDDFAVHPLSLLW  219 (393)
T ss_dssp             GGCHHHHHHHHHHHTTTTCSEEEEEEEEECC-TTTCTT------------SCCCGG--GCGGGCCBHHHHTTHHHHHHHH
T ss_pred             ccChHHHHHHHHHHcCCCccccceeeeeccc-cCCCcc------------cccccc--ccccCCCceecceeeehHHHHH
Confidence             244555666666655556676665554332 211110            011121  2223346678888755554 57


Q ss_pred             hhcC
Q 018600          302 YLFG  305 (353)
Q Consensus       302 ~LF~  305 (353)
                      ||||
T Consensus       220 ~l~G  223 (393)
T 4fb5_A          220 YLFG  223 (393)
T ss_dssp             HHTC
T ss_pred             HhcC
Confidence            8998

>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A

Probab=97.54  E-value=0.00062  Score=63.96  Aligned_cols=215  Identities=12%  Similarity=0.080  Sum_probs=129.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .+.||+|+|+ |.||...+..+.++| .+++++++. +|-+...+.+++|.-..                     .+.++
T Consensus         5 ~~~~vgiiG~-G~ig~~~~~~l~~~~-~~~lv~v~d-~~~~~~~~~a~~~~~~~---------------------~~~~~   60 (362)
T 1ydw_A            5 TQIRIGVMGC-ADIARKVSRAIHLAP-NATISGVAS-RSLEKAKAFATANNYPE---------------------STKIH   60 (362)
T ss_dssp             -CEEEEEESC-CTTHHHHHHHHHHCT-TEEEEEEEC-SSHHHHHHHHHHTTCCT---------------------TCEEE
T ss_pred             CceEEEEECc-hHHHHHHHHHHhhCC-CcEEEEEEc-CCHHHHHHHHHHhCCCC---------------------CCeee
Confidence            3568999997 999999999988876 499998764 57777777777775200                     01122


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEeec-----CCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA-----DSE  227 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlPV-----DSE  227 (353)
                      .   .+.++++.+++|.|+.+..-..-..-+..|+++||.|.+ .|=.-  +.-..-+.++|++++..+.--     +..
T Consensus        61 ~---~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~V~~-EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~r~~p~  136 (362)
T 1ydw_A           61 G---SYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILL-EKPVAMNVTEFDKIVDACEANGVQIMDGTMWVHNPR  136 (362)
T ss_dssp             S---SHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEE-CSSCSSSHHHHHHHHHHHHTTTCCEEECCCGGGSGG
T ss_pred             C---CHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCCeEEE-ecCCcCCHHHHHHHHHHHHHcCCEEEEEEeeccCHH
Confidence            1   234556667899999999888778889999999998875 56221  223455677888888776521     223


Q ss_pred             hhHHHHhhcC-CCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCcccee-cccccchhHHHHH-hhhhc
Q 018600          228 HSAIFQCIQG-LPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVD-SATLFNKGLEVIE-AHYLF  304 (353)
Q Consensus       228 HsAIfQ~L~g-~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITID-SATmmNKgLEvIE-A~~LF  304 (353)
                      +..+-+.|.. ....+|..+..+-+   |+ .+.+ .        .. .+|..-+.  .+ .+.|++-|.=.|. ++|||
T Consensus       137 ~~~~~~~i~~g~~iG~i~~v~~~~~---~~-~~~~-~--------~~-~~wr~~~~--~~ggG~l~d~g~H~id~~~~l~  200 (362)
T 1ydw_A          137 TALLKEFLSDSERFGQLKTVQSCFS---FA-GDED-F--------LK-NDIRVKPG--LDGLGALGDAGWYAIRATLLAN  200 (362)
T ss_dssp             GTTTTTGGGCTTTTCSEEEEEEEEE---EE-CCHH-H--------HH-HCGGGCTT--SSTTHHHHHTHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCccceEEEEEEEE---ec-CCcc-c--------cc-CCcccCcc--cCCCceeecccHHHHHHHHHhc
Confidence            3344444532 23445655544322   10 1111 1        00 12332111  12 3567777666664 47888


Q ss_pred             CC-CCCceEEEEc----CC---cceEEEEEecCCcee
Q 018600          305 GA-EYDNIEIIIH----PQ---SIIHSMVETQVLLYP  333 (353)
Q Consensus       305 ~i-~~d~IevvIH----Pq---SiIHsmVef~DGs~~  333 (353)
                      |. .++.+.....    +.   -..+.+++|.||..-
T Consensus       201 g~~~p~~V~a~~~~~~~~~~~~d~~~~~l~~~~G~~~  237 (362)
T 1ydw_A          201 NFELPKTVTAFPGAVLNEAGVILSCGASLSWEDGRTA  237 (362)
T ss_dssp             TTCCCSEEEECSCCEECTTSCEEEEEEEEECSSSCEE
T ss_pred             CCCCCeEEEEeccccccCCCCceEEEEEEEECCCCEE
Confidence            85 3666665421    11   135677888888643

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=97.53  E-value=0.00025  Score=65.56  Aligned_cols=214  Identities=13%  Similarity=0.095  Sum_probs=129.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHED------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd------~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      -||+|+|+ |+||+.=+..+++.|+      ..+|+|++ ..|-+.+.+.+++|.-..++                    
T Consensus         7 lrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~l~av~-d~~~~~a~~~a~~~g~~~~~--------------------   64 (390)
T 4h3v_A            7 LGIGLIGY-AFMGAAHSQAWRSAPRFFDLPLHPDLNVLC-GRDAEAVRAAAGKLGWSTTE--------------------   64 (390)
T ss_dssp             EEEEEECH-HHHHHHHHHHHHHHHHHSCCSSEEEEEEEE-CSSHHHHHHHHHHHTCSEEE--------------------
T ss_pred             CcEEEEcC-CHHHHHHHHHHHhCccccccccCceEEEEE-cCCHHHHHHHHHHcCCCccc--------------------
Confidence            38999995 9999988888877664      45899965 57888888888888743322                    


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeeccccee--ecccchhHH---hhhcCCeEee-c
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLI--AGGPFVLPL---AHKHNIKILP-A  224 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV--~aG~li~~~---a~~~~~~IlP-V  224 (353)
                             ..+.++++.+++|.|+.+..-..=...+.+|+++||.|.+ =|=.=.  .-..-+.++   +++.|..+.. -
T Consensus        65 -------~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~-EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~  136 (390)
T 4h3v_A           65 -------TDWRTLLERDDVQLVDVCTPGDSHAEIAIAALEAGKHVLC-EKPLANTVAEAEAMAAAAAKAAAGGIRSMVGF  136 (390)
T ss_dssp             -------SCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEE-ESSSCSSHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             -------CCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCCcee-ecCcccchhHHHHHHHHHHHHHhcCCceEEEe
Confidence                   1235667778999999999888888999999999999864 121100  112223333   3445544332 1


Q ss_pred             ----CCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-
Q 018600          225 ----DSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-  299 (353)
Q Consensus       225 ----DSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-  299 (353)
                          +..+..+-++|+......|..+-..-.-+-.++.             -..++|..-+.- --.+.|++-|--.|- 
T Consensus       137 ~~R~~p~~~~~k~~i~~g~iG~i~~v~~~~~~~~~~~~-------------~~~~~wr~~~~~-~GgG~l~d~g~H~iD~  202 (390)
T 4h3v_A          137 TYRRVPAIALARKLVADGKIGTVRHVRAQYLQDWIADP-------------EAPLSWRLDKDK-AGSGALGDIGAHIVDL  202 (390)
T ss_dssp             GGGGSHHHHHHHHHHHTTSSCSEEEEEEEEECCTTCST-------------TSCCCGGGCHHH-HSCSHHHHTHHHHHHH
T ss_pred             eeccCchHHHHHHHHHcCCCCcceeeEEEEeeeccCCC-------------CCCccccccccc-cCCcchhhhHHHHHHH
Confidence                3334445556655455556555433222111110             123456431110 013567777766664 


Q ss_pred             hhhhcCCCCCceEEEEc---------------------------CCcceEEEEEecCCceee
Q 018600          300 AHYLFGAEYDNIEIIIH---------------------------PQSIIHSMVETQVLLYPV  334 (353)
Q Consensus       300 A~~LF~i~~d~IevvIH---------------------------PqSiIHsmVef~DGs~~~  334 (353)
                      ++||||-++.++....+                           -+-..+.+++|.+|..-.
T Consensus       203 ~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdd~~~~~~~~~~G~~~~  264 (390)
T 4h3v_A          203 TQFITGDRIAEVSGRLETFVKERPKPEAHSGLSGTASAERGPVTVDDAAVFLATFRGGALGV  264 (390)
T ss_dssp             HHHHHSCCEEEEEEEEECSCCEEECTTCCCCC--CCGGGEEECCSCSEEEEEEEETTSCEEE
T ss_pred             HHHHhCCCceEEEEEEEeecccCCcccccccccccccccccccccccceeeEEecCCCcEEe
Confidence            57899965666555432                           123567888999987643

>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}

Probab=97.31  E-value=7.1e-05  Score=72.09  Aligned_cols=105  Identities=24%  Similarity=0.320  Sum_probs=75.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC-------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHED-------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd-------~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~  149 (353)
                      .||+|+| +|.||+..++.++++++       +++|++++..+ .++    .+.|....                     
T Consensus         4 irvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~-~~~----~~~~~~~~---------------------   56 (332)
T 2ejw_A            4 LKIALLG-GGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD-PRK----PRAIPQEL---------------------   56 (332)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC-TTS----CCSSCGGG---------------------
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC-HHH----hhccCccc---------------------
Confidence            5799999 59999999999999875       68999987654 221    11111000                     


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEeccCc-cCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhc
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTGIVGC-AGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH  217 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~-aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~  217 (353)
                         ++.   .+.++.   ++|+|+.+..+. ....-..+|+++||.|..+||.-+..-++-+.++|+++
T Consensus        57 ---~~~---d~~~ll---~iDvVve~t~~~~~a~~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~  116 (332)
T 2ejw_A           57 ---LRA---EPFDLL---EADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEG  116 (332)
T ss_dssp             ---EES---SCCCCT---TCSEEEECCCCSHHHHHHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred             ---ccC---CHHHHh---CCCEEEECCCCcHHHHHHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence               110   111222   799999998776 34556678999999999999998887888888999887

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.20  E-value=0.0032  Score=53.96  Aligned_cols=40  Identities=13%  Similarity=0.236  Sum_probs=30.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHH-hCCCceEEEEEeecCCHH-HHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAAGSNIT-LLAD  119 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaagsNv~-lL~~  119 (353)
                      +|+|.|.|+||.||..+.+-+. +.  .++|++++  +|-+ .+.+
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~--r~~~~~~~~   46 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYT--DMHITLYG--RQLKTRIPP   46 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEE--SSHHHHSCH
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEe--cCccccchh
Confidence            4669999999999999999887 53  68888875  5555 4443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.10  E-value=0.0038  Score=59.09  Aligned_cols=170  Identities=22%  Similarity=0.217  Sum_probs=99.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      +||.|+|| |.+|+.+.+.+.++   ++|.  .+..|-+.+.+ ++++-. .+. .|..                    .
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~~---~~v~--~~~~~~~~~~~-~~~~~~-~~~-~d~~--------------------d   67 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKDE---FDVY--IGDVNNENLEK-VKEFAT-PLK-VDAS--------------------N   67 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTT---SEEE--EEESCHHHHHH-HTTTSE-EEE-CCTT--------------------C
T ss_pred             cEEEEECC-CHHHHHHHHHHhcC---CCeE--EEEcCHHHHHH-HhccCC-cEE-EecC--------------------C
Confidence            47999999 99999988888764   5554  23456555543 333221 111 1211                    2


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEee---cCCchhHHH-
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILP---ADSEHSAIF-  232 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlP---VDSEHsAIf-  232 (353)
                      .+.+.++++  ++|+||+++-++.+..-..+|+++|+...=..=+.  --=.-+.+.|++.|+.++|   +|.=-+-++ 
T Consensus        68 ~~~l~~~~~--~~DvVi~~~p~~~~~~v~~~~~~~g~~yvD~s~~~--~~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~a  143 (365)
T 3abi_A           68 FDKLVEVMK--EFELVIGALPGFLGFKSIKAAIKSKVDMVDVSFMP--ENPLELRDEAEKAQVTIVFDAGFAPGLSNILM  143 (365)
T ss_dssp             HHHHHHHHT--TCSEEEECCCGGGHHHHHHHHHHHTCEEEECCCCS--SCGGGGHHHHHHTTCEEECCCBTTTBHHHHHH
T ss_pred             HHHHHHHHh--CCCEEEEecCCcccchHHHHHHhcCcceEeeeccc--hhhhhhhhhhccCCceeeecCCCCCchHHHHH
Confidence            345566654  58999999999999888999999999865433111  1112356788899999998   565443333 


Q ss_pred             -HhhcCCCCCCcceEEEEecC------CcCCCCChhhhhcCCHHH---HhcCC--CCCCCCccceec
Q 018600          233 -QCIQGLPEGALRRIILTASG------GAFRDWPVEKLKEVKVAD---ALKHP--NWSMGKKITVDS  287 (353)
Q Consensus       233 -Q~L~g~~~~~v~kIiLTASG------GPFr~~~~e~l~~vT~~~---ALkHP--nW~MG~KITIDS  287 (353)
                       ++.+..+   +..+.+-..|      +||+...     .-+++.   ++..|  -|..|+.++|+.
T Consensus       144 ~~~~~~~~---~~~~~~~~gg~p~~~~~~~~y~~-----~~s~~~~i~~~~~~~~~~~~G~~~~v~~  202 (365)
T 3abi_A          144 GRIFQELD---LKEGYIYVGGLPKDPKPPLYYKI-----TWSPRDLIEEYTRPARVIRNGKVSKVDP  202 (365)
T ss_dssp             HHHHHHSC---EEEEEEEEEEEESSCCTTTCCCC-----CSCHHHHHHHHHSCEEEEETTEEEEECT
T ss_pred             HHHHHhcc---ccceeEEecccCCCCCCcchhce-----eechhhhHHhhCCCcEEEECCeEEEecC
Confidence             2222222   3333333333      3432211     112332   33444  578888888864

>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*

Probab=97.01  E-value=0.00062  Score=66.10  Aligned_cols=114  Identities=11%  Similarity=0.090  Sum_probs=78.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .+.||+|+| || .|+.=++.+++.|++|+|+|++. +|.+...+.+++|..+.  ..|                     
T Consensus         6 ~~~rv~VvG-~G-~g~~h~~a~~~~~~~~elvav~~-~~~~~a~~~a~~~gv~~--~~~---------------------   59 (372)
T 4gmf_A            6 PKQRVLIVG-AK-FGEMYLNAFMQPPEGLELVGLLA-QGSARSRELAHAFGIPL--YTS---------------------   59 (372)
T ss_dssp             -CEEEEEEC-ST-TTHHHHHTTSSCCTTEEEEEEEC-CSSHHHHHHHHHTTCCE--ESS---------------------
T ss_pred             CCCEEEEEe-hH-HHHHHHHHHHhCCCCeEEEEEEC-CCHHHHHHHHHHhCCCE--ECC---------------------
Confidence            467999999 48 59999999999999999999875 56788888889887652  111                     


Q ss_pred             ecHHHHHHHhcCCCCcEEEEecc----CccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIV----GCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIv----G~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il  222 (353)
                           +.++..  ++|.|+.++.    +-.+..-+.+|+++||.|..= |=.=.-=..-+.++|+++|+.+.
T Consensus        60 -----~~~l~~--~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~E-KPl~~~ea~~l~~~A~~~g~~~~  123 (372)
T 4gmf_A           60 -----PEQITG--MPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQE-HPLHPDDISSLQTLAQEQGCCYW  123 (372)
T ss_dssp             -----GGGCCS--CCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEE-SCCCHHHHHHHHHHHHHHTCCEE
T ss_pred             -----HHHHhc--CCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEe-cCCCHHHHHHHHHHHHHcCCEEE
Confidence                 122332  4777776654    333477899999999998642 22101113445678888887654

>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1

Probab=97.00  E-value=0.0049  Score=58.51  Aligned_cols=108  Identities=18%  Similarity=0.243  Sum_probs=71.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .||+|+|+ |.||+..++.+.++|+ ++|++++..+ .+.+.+.++++.-+. .-.-......+.+.      +..+. +
T Consensus         3 irVgIiG~-G~iG~~~~r~l~~~~~-~elvav~d~~-~~~~~~~~~~~g~~~-~~~~~~~v~~~~~~------~~~v~-~   71 (334)
T 2czc_A            3 VKVGVNGY-GTIGKRVAYAVTKQDD-MELIGITKTK-PDFEAYRAKELGIPV-YAASEEFIPRFEKE------GFEVA-G   71 (334)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTT-EEEEEEEESS-CSHHHHHHHHTTCCE-EESSGGGHHHHHHH------TCCCS-C
T ss_pred             cEEEEEeE-hHHHHHHHHHHhcCCC-CEEEEEEcCC-HHHHHHHHHhcCccc-cccccccceeccCC------ceEEc-C
Confidence            58999997 9999999999999875 9999998753 455666666664221 11111112122221      11121 2


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecc
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANK  200 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANK  200 (353)
                        ...++..  ++|+|+.+.......+-...++++||+|.+ +|
T Consensus        72 --d~~~l~~--~vDvV~~aTp~~~h~~~a~~~l~aGk~Vi~-sa  110 (334)
T 2czc_A           72 --TLNDLLE--KVDIIVDATPGGIGAKNKPLYEKAGVKAIF-QG  110 (334)
T ss_dssp             --BHHHHHT--TCSEEEECCSTTHHHHHHHHHHHHTCEEEE-CT
T ss_pred             --cHHHhcc--CCCEEEECCCccccHHHHHHHHHcCCceEe-ec
Confidence              2344443  799999998777667778899999999774 53

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.90  E-value=0.0013  Score=57.43  Aligned_cols=46  Identities=15%  Similarity=0.226  Sum_probs=29.2

Q ss_pred             ccccccccCCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           63 RAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        63 ~~~~~~~~~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ++..+++...-..||+|.|.|+||.||..+.+-+.+.. .++|++++
T Consensus        10 ~~~~~~~~~~~~~mk~vlVtGatG~iG~~l~~~L~~~G-~~~V~~~~   55 (236)
T 3qvo_A           10 HSSGRENLYFQGHMKNVLILGAGGQIARHVINQLADKQ-TIKQTLFA   55 (236)
T ss_dssp             ------------CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEEEEE
T ss_pred             ccccccceeecCcccEEEEEeCCcHHHHHHHHHHHhCC-CceEEEEE
Confidence            33333333333557899999999999999999888753 28888876

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=96.81  E-value=0.0052  Score=56.23  Aligned_cols=172  Identities=15%  Similarity=0.204  Sum_probs=106.8

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+|+ |.||.. .+..++++|+ ++|+|+. .+|-+.+.+.+++|....  .                       
T Consensus         6 ~~~igiIG~-G~~g~~~~~~~l~~~~~-~~l~av~-d~~~~~~~~~a~~~~~~~--~-----------------------   57 (308)
T 3uuw_A            6 NIKMGMIGL-GSIAQKAYLPILTKSER-FEFVGAF-TPNKVKREKICSDYRIMP--F-----------------------   57 (308)
T ss_dssp             CCEEEEECC-SHHHHHHTHHHHTSCSS-SEEEEEE-CSCHHHHHHHHHHHTCCB--C-----------------------
T ss_pred             cCcEEEEec-CHHHHHHHHHHHHhCCC-eEEEEEE-CCCHHHHHHHHHHcCCCC--c-----------------------
Confidence            468999997 999997 8898888875 9999975 567888877777775432  0                       


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceee--cccchhHHhhhcCCeEeec-CCchhHH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIA--GGPFVLPLAHKHNIKILPA-DSEHSAI  231 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~--aG~li~~~a~~~~~~IlPV-DSEHsAI  231 (353)
                         +.+.+++.  ++|.|+.+..-..-...+..|+++||.|.+ -|=.-..  -..-+.++++++|..+..- -.-++--
T Consensus        58 ---~~~~~ll~--~~D~V~i~tp~~~h~~~~~~al~~gk~vl~-EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~  131 (308)
T 3uuw_A           58 ---DSIESLAK--KCDCIFLHSSTETHYEIIKILLNLGVHVYV-DKPLASTVSQGEELIELSTKKNLNLMVGFNRRFCPM  131 (308)
T ss_dssp             ---SCHHHHHT--TCSEEEECCCGGGHHHHHHHHHHTTCEEEE-CSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGGCHH
T ss_pred             ---CCHHHHHh--cCCEEEEeCCcHhHHHHHHHHHHCCCcEEE-cCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCHH
Confidence               12344554  799999998888888889999999998653 3322111  2334567788888765432 2233444


Q ss_pred             HHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCC
Q 018600          232 FQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAE  307 (353)
Q Consensus       232 fQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~  307 (353)
                      ||-+... .++++.+.++..    |.              -..+.|.-|       ..|++-|.-.|. ++||||-|
T Consensus       132 ~~~~~~~-ig~~~~~~~~~~----r~--------------~~~~~~~~~-------g~l~d~g~H~id~~~~l~G~~  182 (308)
T 3uuw_A          132 YKEIKNN-ATEIVSINICKH----GL--------------NSLRNVRFD-------STLIDDYIHVIDTALWLANED  182 (308)
T ss_dssp             HHHHHHH-CCSEEEEEEEEE----CS--------------SCCCSSCHH-------HHHHHTHHHHHHHHHHHHCSC
T ss_pred             HHHHHHH-cCCCcEEEEEec----cC--------------CCCCccccC-------ceeeecchHHHHHHHHHcCCC
Confidence            4444321 122333443321    11              012356432       367777655554 67899943

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.64  E-value=0.0043  Score=58.84  Aligned_cols=98  Identities=15%  Similarity=0.165  Sum_probs=70.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh-CCCceEEEEEeecCCHHH-HHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAE-HEDKFRVVALAAGSNITL-LADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~-~pd~F~VvaLaagsNv~l-L~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      +.||+|+| +|.||+..+..+.+ +| .+++++++.. +-+. ..+.+++|.....  .                     
T Consensus         4 ~irVaIIG-~G~iG~~~~~~l~~~~~-~~elvav~d~-~~~~~~~~~a~~~g~~~~--~---------------------   57 (312)
T 1nvm_B            4 KLKVAIIG-SGNIGTDLMIKVLRNAK-YLEMGAMVGI-DAASDGLARAQRMGVTTT--Y---------------------   57 (312)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCS-SEEEEEEECS-CTTCHHHHHHHHTTCCEE--S---------------------
T ss_pred             CCEEEEEc-CcHHHHHHHHHHHhhCc-CeEEEEEEeC-ChhhhHHHHHHHcCCCcc--c---------------------
Confidence            46899999 79999999999966 66 5899987754 3333 3344556654311  0                     


Q ss_pred             EecHHHHHHHhcC---CCCcEEEEeccCccCcHHHHHHHHc--CCcEeeecccce
Q 018600          154 LAGEQGVIEAARH---PDAVTVVTGIVGCAGLKPTVAAIEA--GKDIALANKETL  203 (353)
Q Consensus       154 ~~G~~gl~~~a~~---~~~D~Vv~AIvG~aGL~pT~~Ai~~--gK~IaLANKESL  203 (353)
                          +.+.++.+.   +++|+|+.+...-....-...|+++  ||.|...|.-.+
T Consensus        58 ----~~~e~ll~~~~~~~iDvV~~atp~~~h~~~a~~al~a~~Gk~Vi~ekp~~~  108 (312)
T 1nvm_B           58 ----AGVEGLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTPAAI  108 (312)
T ss_dssp             ----SHHHHHHHSGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEEEECSTTCS
T ss_pred             ----CCHHHHHhccCCCCCcEEEECCChHHHHHHHHHHHHhCCCCEEEEcCcccc
Confidence                123334333   5799999998877888889999999  999988776654

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=96.61  E-value=0.059  Score=40.98  Aligned_cols=42  Identities=21%  Similarity=0.332  Sum_probs=32.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      +++|.|+|+ |.||......+.+.. .++|+++.  +|-+.+.+..
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g-~~~v~~~~--r~~~~~~~~~   46 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSS-NYSVTVAD--HDLAALAVLN   46 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCS-SEEEEEEE--SCHHHHHHHH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCC-CceEEEEe--CCHHHHHHHH
Confidence            478999999 999999999998874 37877654  5666655443

>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}

Probab=96.60  E-value=0.0069  Score=56.81  Aligned_cols=133  Identities=19%  Similarity=0.226  Sum_probs=90.8

Q ss_pred             CCeeEEEEecCChHhH-HHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGT-QTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGt-qTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .+.||+|+|+ |.||. +-+..++++|+ ++|+|++..+- +       +                         .++++
T Consensus        24 ~~~rvgiiG~-G~ig~~~~~~~l~~~~~-~~lvav~d~~~-~-------~-------------------------~g~~~   68 (330)
T 4ew6_A           24 SPINLAIVGV-GKIVRDQHLPSIAKNAN-FKLVATASRHG-T-------V-------------------------EGVNS   68 (330)
T ss_dssp             CCEEEEEECC-SHHHHHTHHHHHHHCTT-EEEEEEECSSC-C-------C-------------------------TTSEE
T ss_pred             CCceEEEEec-CHHHHHHHHHHHHhCCC-eEEEEEEeCCh-h-------h-------------------------cCCCc
Confidence            4569999995 99998 89999999875 99999886541 0       0                         12344


Q ss_pred             EecHHHHHHHhcC-CCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEee-----cC
Q 018600          154 LAGEQGVIEAARH-PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILP-----AD  225 (353)
Q Consensus       154 ~~G~~gl~~~a~~-~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlP-----VD  225 (353)
                      +.   .+.++++. +++|.|+.+..-..-..-+.+|+++||.|.+ -|=.-  +.-..-+.++|+++|..+.-     -+
T Consensus        69 ~~---~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~  144 (330)
T 4ew6_A           69 YT---TIEAMLDAEPSIDAVSLCMPPQYRYEAAYKALVAGKHVFL-EKPPGATLSEVADLEALANKQGASLFASWHSRYA  144 (330)
T ss_dssp             ES---SHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCEEEE-CSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGS
T ss_pred             cC---CHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEE-eCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhcc
Confidence            43   34555555 7899999998877778889999999999874 44211  12234466788888876543     24


Q ss_pred             CchhHHHHhhcCCCCCCcceEEEE
Q 018600          226 SEHSAIFQCIQGLPEGALRRIILT  249 (353)
Q Consensus       226 SEHsAIfQ~L~g~~~~~v~kIiLT  249 (353)
                      ..+..+-+.|+..   .|-++...
T Consensus       145 p~~~~~k~~i~~g---~iG~v~~~  165 (330)
T 4ew6_A          145 PAVEAAKAFLAST---TIKSVHVI  165 (330)
T ss_dssp             TTHHHHHHHHHSS---CEEEEEEE
T ss_pred             HHHHHHHHHHhcC---CceEEEEE
Confidence            5566666777643   35555443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.58  E-value=0.017  Score=48.65  Aligned_cols=38  Identities=24%  Similarity=0.433  Sum_probs=29.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~  118 (353)
                      +||.|+|+||.||....+-+.+.  .++|++++  ++-+.+.
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~--R~~~~~~   38 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIV--RNAGKIT   38 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCSHHHH
T ss_pred             CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEE--cCchhhh
Confidence            36999999999999999998876  58899876  3434443

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.50  E-value=0.014  Score=51.93  Aligned_cols=34  Identities=26%  Similarity=0.295  Sum_probs=28.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +++|.|.|+||.||.+.++-+.+.  .++|++++-.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~   35 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRK   35 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECC
Confidence            578999999999999999988775  4788887643

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=96.45  E-value=0.0089  Score=54.99  Aligned_cols=195  Identities=12%  Similarity=0.171  Sum_probs=118.9

Q ss_pred             CeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+|. |.||.. .+..+.+.|+ ++|+++.. +|.+.+.+.+++|..+                         ++
T Consensus         5 ~~~vgiiG~-G~~g~~~~~~~l~~~~~-~~lvav~d-~~~~~~~~~~~~~g~~-------------------------~~   56 (319)
T 1tlt_A            5 KLRIGVVGL-GGIAQKAWLPVLAAASD-WTLQGAWS-PTRAKALPICESWRIP-------------------------YA   56 (319)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSS-EEEEEEEC-SSCTTHHHHHHHHTCC-------------------------BC
T ss_pred             cceEEEECC-CHHHHHHHHHHHHhCCC-eEEEEEEC-CCHHHHHHHHHHcCCC-------------------------cc
Confidence            568999998 999996 7888887764 99998764 4555555555665432                         11


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEeec-CCchhHH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA-DSEHSAI  231 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlPV-DSEHsAI  231 (353)
                      .   ...++  .+++|.|+.+..-..-...+..|+++||.|.+ .|=.-  +.-..-+.++|++++..+..- -.-++-.
T Consensus        57 ~---~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~-eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~  130 (319)
T 1tlt_A           57 D---SLSSL--AASCDAVFVHSSTASHFDVVSTLLNAGVHVCV-DKPLAENLRDAERLVELAARKKLTLMVGFNRRFAPL  130 (319)
T ss_dssp             S---SHHHH--HTTCSEEEECSCTTHHHHHHHHHHHTTCEEEE-ESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCHH
T ss_pred             C---cHHHh--hcCCCEEEEeCCchhHHHHHHHHHHcCCeEEE-eCCCCCCHHHHHHHHHHHHHcCCeEEEeeecccCHH
Confidence            1   11223  24799999998877777888999999998765 44211  112334667888888776542 2334445


Q ss_pred             HHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCCccceecccccchhHHHHH-hhhhcCCCCCc
Q 018600          232 FQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIE-AHYLFGAEYDN  310 (353)
Q Consensus       232 fQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~KITIDSATmmNKgLEvIE-A~~LF~i~~d~  310 (353)
                      ||-+... ..++..+.....    |...             ..| |.-       ...|++-|.-.|. ++||||-+ ++
T Consensus       131 ~~~~k~~-i~~~~~i~~~~~----~~~~-------------~~p-~~~-------~g~l~d~g~H~id~~~~l~G~~-~~  183 (319)
T 1tlt_A          131 YGELKTQ-LATAASLRMDKH----RSNS-------------VGP-HDL-------YFTLLDDYLHVVDTALWLSGGK-AS  183 (319)
T ss_dssp             HHHHTTT-GGGCCEEEEEEC----CSSC-------------CCS-SCH-------HHHHHHTHHHHHHHHHHHTTTC-CC
T ss_pred             HHHHHHH-hCCCcEEEEEec----CCCc-------------cCC-CCC-------CceeecccccHHHHHHHHcCCC-eE
Confidence            5555422 123444433211    1000             001 110       1356777665555 57899987 77


Q ss_pred             eEEEEc----CCcceEEEEEecCCc
Q 018600          311 IEIIIH----PQSIIHSMVETQVLL  331 (353)
Q Consensus       311 IevvIH----PqSiIHsmVef~DGs  331 (353)
                      +.....    .+...+.+++|.+|.
T Consensus       184 V~a~~~~~~~~~d~~~~~~~~~~g~  208 (319)
T 1tlt_A          184 LDGGTLLTNDAGEMLFAEHHFSAGP  208 (319)
T ss_dssp             EEEEEEEECTTCCEEEEEEEEEETT
T ss_pred             EEEEEEecCCCCcEEEEEEEEcCCC
Confidence            776543    245678889998886

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.43  E-value=0.0021  Score=61.60  Aligned_cols=102  Identities=19%  Similarity=0.262  Sum_probs=59.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-gsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +.||+|+|+||-||+..++.+.++|+ ++|+++.+ .++..+-.  ...| |...   +.......+        ...+ 
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~-~elvai~~s~~~~g~~~--~~~~-~~~~---~~~~~~~~~--------~~~~-   67 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPY-LELVKVSASPSKIGKKY--KDAV-KWIE---QGDIPEEVQ--------DLPI-   67 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSS-EEEEEEECCGGGTTSBH--HHHC-CCCS---SSSCCHHHH--------TCBE-
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCC-cEEEEEecChhhcCCCH--HHhc-Cccc---ccccccCCc--------eeEE-
Confidence            46899999999999999999999975 99999973 32221111  1111 2110   000000001        0111 


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                      ...+ ..++   .++|+|+.+.......+-.-.++++|++|.-
T Consensus        68 ~~~d-~~~~---~~vDvVf~atp~~~s~~~a~~~~~aG~~VId  106 (350)
T 2ep5_A           68 VSTN-YEDH---KDVDVVLSALPNELAESIELELVKNGKIVVS  106 (350)
T ss_dssp             ECSS-GGGG---TTCSEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred             eeCC-HHHh---cCCCEEEECCChHHHHHHHHHHHHCCCEEEE
Confidence            1111 1112   3689999998767666667778899987443

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=96.38  E-value=0.0084  Score=54.44  Aligned_cols=37  Identities=19%  Similarity=0.417  Sum_probs=30.6

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ..+|+|.|.|+||+||...++-+.+....++|+++.-
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~   58 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA   58 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence            3457899999999999999998887666799999864

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.33  E-value=0.013  Score=54.19  Aligned_cols=33  Identities=30%  Similarity=0.510  Sum_probs=29.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      ||+|.|+||-+|+...+.+.+.|+ ++|++..-.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~-~elva~~d~   34 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADD-LTLSAELDA   34 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTT-CEEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEcc
Confidence            799999999999999999988765 999998754

>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1

Probab=96.11  E-value=0.014  Score=56.08  Aligned_cols=110  Identities=16%  Similarity=0.187  Sum_probs=71.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHH------hhCCCEEEEeCccchHHHHHHhhcCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-sNv~lL~~Q~~------eFkPk~V~i~de~~~~~l~~~l~~~~~  149 (353)
                      .||+|.|. |-||+..++.+.++|+ ++|+++... .+.+.++.+.+      +|+-. +-..+..        +.-.+.
T Consensus         4 ikVgI~G~-G~iGr~~~R~l~~~~~-vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~-~~~~~~~--------l~v~g~   72 (335)
T 1u8f_O            4 VKVGVNGF-GRIGRLVTRAAFNSGK-VDIVAINDPFIDLNYMVYMFQYDSTHGKFHGT-VKAENGK--------LVINGN   72 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCS-SEEEEEECSSSCHHHHHHHHHCCTTTCSCSSC-EEEETTE--------EEETTE
T ss_pred             eEEEEEcc-CHHHHHHHHHHHcCCC-cEEEEecCCCCCHHHHHHHhhcccccCCCCCc-eEEcCCe--------EEECCe
Confidence            48999997 9999999999998875 999999874 78888877665      33211 1111110        000011


Q ss_pred             CcEEEecHHHHHHH-hcCCCCcEEEEeccCccCcHHHHHHHHcC-CcEeee
Q 018600          150 KPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALA  198 (353)
Q Consensus       150 ~~~v~~G~~gl~~~-a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g-K~IaLA  198 (353)
                      .++++.- ....++ ....++|+|+.+...+...+-...++++| |+|-+.
T Consensus        73 ~i~v~~~-~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iS  122 (335)
T 1u8f_O           73 PITIFQE-RDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIIS  122 (335)
T ss_dssp             EEEEECC-SSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEES
T ss_pred             EEEEEec-CCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEec
Confidence            1222221 112222 11247999999988888888888889999 666665

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=96.11  E-value=0.034  Score=49.38  Aligned_cols=109  Identities=16%  Similarity=0.178  Sum_probs=70.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEecH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGE  157 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G~  157 (353)
                      ||+|+|. |.+|+.....+.+  ..|+|+++... + +..    ++      ..                          
T Consensus         2 ~vgiIG~-G~mG~~~~~~l~~--~g~~lv~v~d~-~-~~~----~~------~~--------------------------   40 (236)
T 2dc1_A            2 LVGLIGY-GAIGKFLAEWLER--NGFEIAAILDV-R-GEH----EK------MV--------------------------   40 (236)
T ss_dssp             EEEEECC-SHHHHHHHHHHHH--TTCEEEEEECS-S-CCC----TT------EE--------------------------
T ss_pred             EEEEECC-CHHHHHHHHHHhc--CCCEEEEEEec-C-cch----hh------hc--------------------------
Confidence            6999997 9999999988874  46999886543 3 111    11      11                          


Q ss_pred             HHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeec--ccchhHHhhhcCCeEeecCCchh
Q 018600          158 QGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKILPADSEHS  229 (353)
Q Consensus       158 ~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~a--G~li~~~a~~~~~~IlPVDSEHs  229 (353)
                      +.+.+++. .++|+|+.+..-..-..-...++++||.+..-..-++-..  ..-+.++++++|..++ +|+-.+
T Consensus        41 ~~~~~l~~-~~~DvVv~~~~~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~-i~~~~~  112 (236)
T 2dc1_A           41 RGIDEFLQ-REMDVAVEAASQQAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVY-IASGAI  112 (236)
T ss_dssp             SSHHHHTT-SCCSEEEECSCHHHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEE-ECCTTC
T ss_pred             CCHHHHhc-CCCCEEEECCCHHHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEE-ecCccc
Confidence            12244454 5789999988777666777889999998776543222111  1455667778887754 555433

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=96.05  E-value=0.011  Score=52.21  Aligned_cols=55  Identities=16%  Similarity=0.399  Sum_probs=43.7

Q ss_pred             CCe-eEEEEecCChHhHHHHHHHHhCCCceEEEEEee----cCCHHHHHHHHHhhCCCEEEE
Q 018600           75 GPK-PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA----GSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        75 ~~k-~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa----gsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      .|| +|.|.|+||.||....+-+.+.  .++|++++-    -.+.+.+.+..++++++.|+-
T Consensus         3 ~M~m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~   62 (287)
T 3sc6_A            3 AMKERVIITGANGQLGKQLQEELNPE--EYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIH   62 (287)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cceeEEEEECCCCHHHHHHHHHHHhC--CCEEEEecccccCCCCHHHHHHHHHhcCCCEEEE
Confidence            466 8999999999999999888765  699999862    236677888888888998874

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=95.99  E-value=0.0076  Score=58.71  Aligned_cols=40  Identities=15%  Similarity=0.332  Sum_probs=34.7

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI  114 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv  114 (353)
                      ..|.||+|+|+||.+|...++++.+||+ |+|+.++..++.
T Consensus        11 ~~~~~V~IvGAtG~vG~ellrlL~~hP~-~el~~l~S~~~a   50 (351)
T 1vkn_A           11 HHMIRAGIIGATGYTGLELVRLLKNHPE-AKITYLSSRTYA   50 (351)
T ss_dssp             -CCEEEEEESTTSHHHHHHHHHHHHCTT-EEEEEEECSTTT
T ss_pred             cceeEEEEECCCCHHHHHHHHHHHcCCC-cEEEEEeCcccc
Confidence            4578999999999999999999999985 999999876543

>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1

Probab=95.98  E-value=0.042  Score=52.60  Aligned_cols=106  Identities=18%  Similarity=0.211  Sum_probs=65.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |.||+|+|+ |.||+..++.+.++|+ |+|+++.-.+ .+.....+.+..-+ +.-.-+.....+.+    .+  ..+- 
T Consensus         1 mikVgIiGa-G~iG~~l~r~L~~~~~-~elvav~d~~-~~~~~~~~~~~g~~-~~~~~~~~v~~~~~----~~--l~v~-   69 (337)
T 1cf2_P            1 MKAVAINGY-GTVGKRVADAIAQQDD-MKVIGVSKTR-PDFEARMALKKGYD-LYVAIPERVKLFEK----AG--IEVA-   69 (337)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSSS-EEEEEEEESS-CSHHHHHHHHTTCC-EEESSGGGHHHHHH----TT--CCCC-
T ss_pred             CeEEEEEeE-CHHHHHHHHHHHcCCC-cEEEEEEcCC-hhHHHHhcCCcchh-hccccccceeeecC----Cc--eEEc-
Confidence            468999999 9999999999999886 9999987653 23333333332101 11111111111211    11  1121 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                      |  ...++..  ++|+|+.+.......+-...++++|+++.
T Consensus        70 ~--~~~~~~~--~vDvV~~atp~~~~~~~a~~~l~aG~~VI  106 (337)
T 1cf2_P           70 G--TVDDMLD--EADIVIDCTPEGIGAKNLKMYKEKGIKAI  106 (337)
T ss_dssp             E--EHHHHHH--TCSEEEECCSTTHHHHHHHHHHHHTCCEE
T ss_pred             C--CHHHHhc--CCCEEEECCCchhhHHHHHHHHHcCCEEE
Confidence            2  1333432  69999999888877777888999998743

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.95  E-value=0.034  Score=50.06  Aligned_cols=34  Identities=18%  Similarity=0.252  Sum_probs=29.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      |+|.|+|+||.||...++-+.+.  .++|++++-+.
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~   45 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPN   45 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTT
T ss_pred             CeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCC
Confidence            58999999999999999998876  48898887543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.95  E-value=0.015  Score=53.34  Aligned_cols=99  Identities=12%  Similarity=0.087  Sum_probs=58.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhh---CCCEEEEeCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRF---KPQVVAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~eF---kPk~V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      +++|.|+|+||.||...++-+.+..  ++|++++-..  +-+++. ...++   +.++ ...|-...+.+.+.+...+.+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~-~~~~l~~~~v~~-~~~Dl~d~~~l~~~~~~~~~d   85 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKAK-IFKALEDKGAII-VYGLINEQEAMEKILKEHEID   85 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHH-HHHHHHHTTCEE-EECCTTCHHHHHHHHHHTTCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHHH-HHHHHHhCCcEE-EEeecCCHHHHHHHHhhCCCC
Confidence            4689999999999999999998864  7899887644  334443 22222   2322 234555567777777622222


Q ss_pred             cEEE-------ecHHHHHHHhcCCC-CcEEEEeccC
Q 018600          151 PEIL-------AGEQGVIEAARHPD-AVTVVTGIVG  178 (353)
Q Consensus       151 ~~v~-------~G~~gl~~~a~~~~-~D~Vv~AIvG  178 (353)
                      .-|.       .+..-+.+.+.... +..++.+..|
T Consensus        86 ~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g  121 (346)
T 3i6i_A           86 IVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFG  121 (346)
T ss_dssp             EEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSCCS
T ss_pred             EEEECCchhhHHHHHHHHHHHHHcCCceEEeecccC
Confidence            2121       13344556555444 6667654444

>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*

Probab=95.93  E-value=0.0088  Score=55.20  Aligned_cols=124  Identities=12%  Similarity=0.089  Sum_probs=83.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhC--CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEH--EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~--pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .+.||+|+|. |.||+.-++.+.+.  .+.++++|++..+.      .++++                         ++.
T Consensus         6 ~~~rvgiIG~-G~iG~~~~~~l~~~~~~~~~~lvav~d~~~------~a~~~-------------------------g~~   53 (294)
T 1lc0_A            6 GKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRE------LGSLD-------------------------EVR   53 (294)
T ss_dssp             CSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSC------CCEET-------------------------TEE
T ss_pred             CcceEEEEEE-cHHHHHHHHHHhccccCCCEEEEEEECchH------HHHHc-------------------------CCC
Confidence            4568999997 99999988887762  24699999876531      00000                         111


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEe-ecCCchh
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKIL-PADSEHS  229 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~Il-PVDSEHs  229 (353)
                        .  ..+.++++.+++|.|+.+..-..-..-+.+|+++||.|.. .|=.-  ..-..-+.++|+++|..+. --..-|+
T Consensus        54 --~--~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~  128 (294)
T 1lc0_A           54 --Q--ISLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQKGRVLHEEHVELLM  128 (294)
T ss_dssp             --B--CCHHHHHHCSSEEEEEECSCGGGHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGS
T ss_pred             --C--CCHHHHhcCCCCCEEEEeCCcHhHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcc
Confidence              1  2467777778999999999888888889999999998876 56322  1224556788888887643 3334444


Q ss_pred             HHHHhh
Q 018600          230 AIFQCI  235 (353)
Q Consensus       230 AIfQ~L  235 (353)
                      ..||.+
T Consensus       129 p~~~~~  134 (294)
T 1lc0_A          129 EEFEFL  134 (294)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            444444

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.91  E-value=0.078  Score=52.93  Aligned_cols=116  Identities=18%  Similarity=0.191  Sum_probs=70.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +|+|.|+|+ |.||+.++..+.+.++ ++|+.  +++|.+++.+.+++.+...+. .|-...                  
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g-~~V~v--~~R~~~ka~~la~~~~~~~~~-~D~~d~------------------   79 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDD-INVTV--ACRTLANAQALAKPSGSKAIS-LDVTDD------------------   79 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTT-EEEEE--EESSHHHHHHHHGGGTCEEEE-CCTTCH------------------
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCC-CeEEE--EECCHHHHHHHHHhcCCcEEE-EecCCH------------------
Confidence            578999998 9999999999988754 67543  357778777766553322221 222212                  


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHH--HHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKP--TVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~p--T~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il  222 (353)
                        +.+.++.+  ++|+||++..-  ++.+  ..+++++|+.+.-.|=.  ...-.-+.+.|++.|+.++
T Consensus        80 --~~l~~~l~--~~DvVIn~tp~--~~~~~v~~a~l~~g~~vvd~~~~--~p~~~~Ll~~Ak~aGv~~i  140 (467)
T 2axq_A           80 --SALDKVLA--DNDVVISLIPY--TFHPNVVKSAIRTKTDVVTSSYI--SPALRELEPEIVKAGITVM  140 (467)
T ss_dssp             --HHHHHHHH--TSSEEEECSCG--GGHHHHHHHHHHHTCEEEECSCC--CHHHHHHHHHHHHHTCEEE
T ss_pred             --HHHHHHHc--CCCEEEECCch--hhhHHHHHHHHhcCCEEEEeecC--CHHHHHHHHHHHHcCCEEE
Confidence              23333333  58999999553  3333  45678888877654310  0011345567778887665

>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}

Probab=95.91  E-value=0.014  Score=54.31  Aligned_cols=124  Identities=12%  Similarity=0.085  Sum_probs=75.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|+ |.||+.-+..++++|+ ++|+|+. .+|-+.+.+    +..++                          .
T Consensus         9 ~irv~IIG~-G~iG~~~~~~l~~~~~-~elvav~-d~~~~~~~~----~g~~~--------------------------~   55 (304)
T 3bio_A            9 KIRAAIVGY-GNIGRYALQALREAPD-FEIAGIV-RRNPAEVPF----ELQPF--------------------------R   55 (304)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCTT-EEEEEEE-CC-----------CCTTS--------------------------C
T ss_pred             CCEEEEECC-hHHHHHHHHHHhcCCC-CEEEEEE-cCCHHHHHH----cCCCc--------------------------C
Confidence            468999997 9999999999999875 9999976 445443321    21110                          0


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc---eeecccchhHHhhhcCCeEe---ecCCchh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET---LIAGGPFVLPLAHKHNIKIL---PADSEHS  229 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES---LV~aG~li~~~a~~~~~~Il---PVDSEHs  229 (353)
                      +.+.+.   +..++|+|+.+..-..-..-...|+++||.+..- |-.   .+.-..-+.+.+++.+..+.   =-+..+.
T Consensus        56 ~~~~l~---~~~~~DvViiatp~~~h~~~~~~al~aG~~Vi~e-kP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~  131 (304)
T 3bio_A           56 VVSDIE---QLESVDVALVCSPSREVERTALEILKKGICTADS-FDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSD  131 (304)
T ss_dssp             EESSGG---GSSSCCEEEECSCHHHHHHHHHHHHTTTCEEEEC-CCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHH
T ss_pred             CHHHHH---hCCCCCEEEECCCchhhHHHHHHHHHcCCeEEEC-CCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHH
Confidence            112222   2267999999887666677788999999988753 321   11122445667777775432   1244455


Q ss_pred             HHHHhhc
Q 018600          230 AIFQCIQ  236 (353)
Q Consensus       230 AIfQ~L~  236 (353)
                      .+-+.|.
T Consensus       132 ~~~~~i~  138 (304)
T 3bio_A          132 SVVRTLM  138 (304)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            5555554

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=95.90  E-value=0.0081  Score=57.97  Aligned_cols=37  Identities=19%  Similarity=0.380  Sum_probs=33.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      .|.||+|+|+||-+|.+.++++.+||+ |++++++..+
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~-~el~~l~s~~   39 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPH-MNITALTVSA   39 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTT-EEEEEEEEET
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEecC
Confidence            468999999999999999999999986 9999997766

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=95.84  E-value=0.033  Score=51.40  Aligned_cols=93  Identities=11%  Similarity=0.171  Sum_probs=62.1

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCcc-chHHHHHHhhcCCCCcE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPE  152 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~-~~~~l~~~l~~~~~~~~  152 (353)
                      ..-++|.|.|++|.||..++.+.+..  ..+|++..  +|-+++. .++++..+.+.-.+.. ..+.+            
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~--~~~~~~~-~~~~~ga~~~~~~~~~~~~~~~------------  209 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVA--STDEKLK-IAKEYGAEYLINASKEDILRQV------------  209 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEE--SSHHHHH-HHHHTTCSEEEETTTSCHHHHH------------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHH-HHHHcCCcEEEeCCCchHHHHH------------
Confidence            34478999999999999999999986  56888765  4556654 7788888877654322 22222            


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                              .++.....+|+|+++..+ ..+...+.+++.|
T Consensus       210 --------~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~  240 (334)
T 3qwb_A          210 --------LKFTNGKGVDASFDSVGK-DTFEISLAALKRK  240 (334)
T ss_dssp             --------HHHTTTSCEEEEEECCGG-GGHHHHHHHEEEE
T ss_pred             --------HHHhCCCCceEEEECCCh-HHHHHHHHHhccC
Confidence                    223333469999998655 5555555555444

>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1

Probab=95.84  E-value=0.029  Score=53.81  Aligned_cols=107  Identities=14%  Similarity=0.129  Sum_probs=67.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |.||+|+|+ |.||+..++.+.++|+ |+|++++.. +.+.....++++.-+.  ..+ ....++   +.+.  ++++..
T Consensus         1 ~ikVgIiGa-G~iG~~~~r~L~~~p~-~elvav~d~-~~~~~~~~a~~~g~~~--~~~-~~~~~~---~~~~--~v~v~~   69 (340)
T 1b7g_O            1 MVNVAVNGY-GTIGKRVADAIIKQPD-MKLVGVAKT-SPNYEAFIAHRRGIRI--YVP-QQSIKK---FEES--GIPVAG   69 (340)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTT-EEEEEEECS-SCSHHHHHHHHTTCCE--ECC-GGGHHH---HHTT--TCCCCC
T ss_pred             CeEEEEEec-CHHHHHHHHHHHcCCC-CEEEEEEcC-ChHHHHHHHHhcCcce--ecC-cCHHHH---hccc--cccccc
Confidence            358999999 9999999999999875 999999875 4455555565543221  121 112222   2211  122221


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA  198 (353)
                         .+.++..  ++|+|+.+.......+-.-.++++|.++...
T Consensus        70 ---~~e~l~~--~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~  107 (340)
T 1b7g_O           70 ---TVEDLIK--TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQ  107 (340)
T ss_dssp             ---CHHHHHH--HCSEEEECCSTTHHHHHHHHHHHTTCEEEEC
T ss_pred             ---CHhHhhc--CCCEEEECCCCchhHHHHHHHHHcCCeEEEe
Confidence               1333332  5899999976666666666778899765544

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.82  E-value=0.052  Score=48.77  Aligned_cols=34  Identities=21%  Similarity=0.221  Sum_probs=29.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +++|.|+|+||.||...++-+.+.  .++|++++-+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~   37 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARP   37 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECC
Confidence            578999999999999999998875  4888888644

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.80  E-value=0.012  Score=55.22  Aligned_cols=37  Identities=19%  Similarity=0.355  Sum_probs=32.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      .|.||+|.|+||-+|+..++.+.++|+ +++++....+
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~-~eLv~~~d~~   42 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPD-ATLVGALDRT   42 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTT-EEEEEEBCCT
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEEec
Confidence            457899999999999999999998875 9999987655

>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}

Probab=95.74  E-value=0.068  Score=43.03  Aligned_cols=60  Identities=20%  Similarity=0.323  Sum_probs=47.3

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--------------HHHHHHHHHhhCCCEEEEeCcc
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--------------ITLLADQVKRFKPQVVAVRNES  135 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN--------------v~lL~~Q~~eFkPk~V~i~de~  135 (353)
                      +..++++|+|+ |..|...++.++++| .|+|+|+.-...              .+.|.+.+++.+++.|.++-+.
T Consensus         2 ~~~~~vlIiGa-G~~g~~l~~~l~~~~-g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia~~~   75 (141)
T 3nkl_A            2 NAKKKVLIYGA-GSAGLQLANMLRQGK-EFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLAVPS   75 (141)
T ss_dssp             -CCEEEEEECC-SHHHHHHHHHHHHSS-SEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEECCTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCC-CcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEeCCC
Confidence            34689999998 678999999999887 799999864321              4568888889999998887543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.74  E-value=0.072  Score=47.32  Aligned_cols=34  Identities=21%  Similarity=0.275  Sum_probs=28.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +|+|.|+|+||.||...++-+.+.  .++|++++-.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~   37 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRE   37 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECC
Confidence            578999999999999999988876  4788887643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.73  E-value=0.026  Score=49.96  Aligned_cols=56  Identities=18%  Similarity=0.283  Sum_probs=42.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----CCHHHHHHHHHhhCCCEEEE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----SNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----sNv~lL~~Q~~eFkPk~V~i  131 (353)
                      ..+++|.|.|+||+||....+-+.+.  .++|+++.-.    ++.+.+.+..++.+++.|+-
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih   69 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVIN   69 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cccceEEEECCCChHHHHHHHHHHhC--CCeEEeccCccCCCCCHHHHHHHHHhcCCCEEEE
Confidence            45789999999999999999988864  6999998522    35566666676668888774

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.61  E-value=0.043  Score=51.83  Aligned_cols=95  Identities=18%  Similarity=0.155  Sum_probs=64.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..+|.|.|++|.||..++.+.+..  ..+|++.+..   +++ +.++++..+.++-..+...   .              
T Consensus       165 g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~~~---~~~-~~~~~lGa~~vi~~~~~~~---~--------------  221 (371)
T 3gqv_A          165 PVYVLVYGGSTATATVTMQMLRLS--GYIPIATCSP---HNF-DLAKSRGAEEVFDYRAPNL---A--------------  221 (371)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECG---GGH-HHHHHTTCSEEEETTSTTH---H--------------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCH---HHH-HHHHHcCCcEEEECCCchH---H--------------
Confidence            467999999999999999999986  5689988522   333 3678888887765433221   1              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHH-HcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAI-EAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai-~~gK~Ia  196 (353)
                        +.+.++... .+|+|++++.|-..+...+.++ +.|=++.
T Consensus       222 --~~v~~~t~g-~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv  260 (371)
T 3gqv_A          222 --QTIRTYTKN-NLRYALDCITNVESTTFCFAAIGRAGGHYV  260 (371)
T ss_dssp             --HHHHHHTTT-CCCEEEESSCSHHHHHHHHHHSCTTCEEEE
T ss_pred             --HHHHHHccC-CccEEEECCCchHHHHHHHHHhhcCCCEEE
Confidence              122233322 4999999987767777777777 4443333

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.59  E-value=0.068  Score=46.37  Aligned_cols=81  Identities=15%  Similarity=0.145  Sum_probs=54.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCE--EEEeCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQV--VAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~--V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..++...+.  +...|-...+.+++.+.        
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--------   78 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAAS--GARLILID--REAAALDRAAQELGAAVAARIVADVTDAEAMTAAAA--------   78 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHH--------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHH--------
Confidence            468999999999999999998876  57887764  67777777766665444  23345444555554331        


Q ss_pred             EecHHHHHHHhcCCCCcEEEEec
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                           .+.+   ..++|+||+..
T Consensus        79 -----~~~~---~~~id~li~~A   93 (254)
T 2wsb_A           79 -----EAEA---VAPVSILVNSA   93 (254)
T ss_dssp             -----HHHH---HSCCCEEEECC
T ss_pred             -----HHHh---hCCCcEEEECC
Confidence                 1222   24688988864

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.59  E-value=0.082  Score=49.13  Aligned_cols=48  Identities=17%  Similarity=0.295  Sum_probs=34.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      .|+|.|.|+||+||....+-+.+.+..++|++++  ++-+.+.+..+++.
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~--r~~~~~~~~~~~~~   68 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYS--RDELKQSEMAMEFN   68 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEE--SCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEE--CChhhHHHHHHHhc
Confidence            4679999999999999999887753324888875  45566555555553

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=95.53  E-value=0.056  Score=52.77  Aligned_cols=43  Identities=16%  Similarity=0.179  Sum_probs=34.5

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEeecCCH
Q 018600           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALAAGSNI  114 (353)
Q Consensus        72 ~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLaagsNv  114 (353)
                      ....+|+|.|.|+||+||...++-+.+.+. .++|+++.=+.+-
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~  112 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD  112 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence            345578999999999999999988877654 4899999865553

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=95.51  E-value=0.014  Score=57.39  Aligned_cols=36  Identities=36%  Similarity=0.601  Sum_probs=31.3

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ..+.||+|+|+||.+|...++++.+||+ |+|+.|.+
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~-~el~~l~a   52 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPE-FEIHALGA   52 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSS-EEEEEEEE
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCC-ceEEEeec
Confidence            3457899999999999999999999985 89999853

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=95.50  E-value=0.023  Score=53.04  Aligned_cols=110  Identities=18%  Similarity=0.131  Sum_probs=70.6

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      ++...||+|.|+||.+|+..++.+.++  .|++++..--+..          . +.  +                 .+..
T Consensus         4 ~~~~~rVaViG~sG~~G~~~~~~l~~~--g~~~V~~V~p~~~----------g-~~--~-----------------~G~~   51 (288)
T 2nu8_A            4 IDKNTKVICQGFTGSQGTFHSEQAIAY--GTKMVGGVTPGKG----------G-TT--H-----------------LGLP   51 (288)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECTTCT----------T-CE--E-----------------TTEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCcc----------c-ce--e-----------------CCee
Confidence            456679999999999999999988886  4786654321100          0 00  0                 0123


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeeccc------chhHHhhhcCCeEe
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGP------FVLPLAHKHNIKIL  222 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~------li~~~a~~~~~~Il  222 (353)
                      ++.-   +.++....++|+++.....-.-.....+|+++|+++++-     ++.|-      -+.+.|++++.+++
T Consensus        52 vy~s---l~el~~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi-----~t~G~~~~~~~~l~~~A~~~gv~li  119 (288)
T 2nu8_A           52 VFNT---VREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIIT-----ITEGIPTLDMLTVKVKLDEAGVRMI  119 (288)
T ss_dssp             EESS---HHHHHHHHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE-----CCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             ccCC---HHHHhhcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE-----ECCCCCHHHHHHHHHHHHHcCCEEE
Confidence            3322   233333336889999988888888888999999885432     22222      45667778887776

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.49  E-value=0.15  Score=45.70  Aligned_cols=83  Identities=14%  Similarity=0.085  Sum_probs=55.0

Q ss_pred             CeeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .|++.|.|+||+  ||..+..-+.+.  .++|+.+.-+..-+.+.+..+++..-.+...|-...+.+++.+.        
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~--------   95 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFV--------   95 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHH--------
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHH--------
Confidence            378999999988  999999888876  57887776555446666666666543444456555555555432        


Q ss_pred             EecHHHHHHHhcCCCCcEEEEe
Q 018600          154 LAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                           .+.  .....+|++|+.
T Consensus        96 -----~~~--~~~g~id~li~n  110 (280)
T 3nrc_A           96 -----ELG--KVWDGLDAIVHS  110 (280)
T ss_dssp             -----HHH--HHCSSCCEEEEC
T ss_pred             -----HHH--HHcCCCCEEEEC
Confidence                 111  123468999986

>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}

Probab=95.46  E-value=0.019  Score=55.38  Aligned_cols=109  Identities=19%  Similarity=0.218  Sum_probs=62.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEe--CccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR--NESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~--de~~~~~l~~~l~~~~~~~~v  153 (353)
                      |.||+|+|+ |-||+..++.+.++|+ |+|+|+...+ .+.+....+.-.. .+.-.  ++....++...      ...+
T Consensus         2 mikVgI~G~-G~IGr~v~r~l~~~~~-~evvaV~d~~-~~~~~~l~~~dg~-s~~g~~~~~~~v~~~~~~------~l~v   71 (343)
T 2yyy_A            2 PAKVLINGY-GSIGKRVADAVSMQDD-MEVIGVTKTK-PDFEARLAVEKGY-KLFVAIPDNERVKLFEDA------GIPV   71 (343)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHSSS-EEEEEEEESS-CSHHHHHHHHTTC-CEEESSCCHHHHHHHHHT------TCCC
T ss_pred             ceEEEEECC-CHHHHHHHHHHHhCCC-ceEEEEecCC-HHHHHHHHHhcCC-ccccccCCCceeecccCC------eEEE
Confidence            358999999 9999999999998875 9999998753 4444433332110 11111  11111112211      1112


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHH-HHHHHcCCcEeeecc
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPT-VAAIEAGKDIALANK  200 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT-~~Ai~~gK~IaLANK  200 (353)
                       .|.  ..++.  .++|+|+.+..+....+-. ..++++|+++.+ |+
T Consensus        72 -~~~--~~~~~--~~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~-sa  113 (343)
T 2yyy_A           72 -EGT--ILDII--EDADIVVDGAPKKIGKQNLENIYKPHKVKAIL-QG  113 (343)
T ss_dssp             -CCB--GGGTG--GGCSEEEECCCTTHHHHHHHHTTTTTTCEEEE-CT
T ss_pred             -CCc--hHHhc--cCCCEEEECCCccccHHHHHHHHHHCCCEEEE-CC
Confidence             221  12222  2799999997665544544 378899988654 44

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=95.46  E-value=0.01  Score=57.60  Aligned_cols=37  Identities=22%  Similarity=0.414  Sum_probs=33.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      +.||+|+|+||.+|...++++.+||+ |+++.|+..++
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~-~el~~l~S~~s   43 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPY-IKPAYLAGKGS   43 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSS-EEEEEEEESTT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-ceEEEEECchh
Confidence            46899999999999999999999985 89999986655

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=95.46  E-value=0.01  Score=57.60  Aligned_cols=37  Identities=22%  Similarity=0.414  Sum_probs=33.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      +.||+|+|+||.+|...++++.+||+ |+++.|+..++
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~-~el~~l~S~~s   43 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPY-IKPAYLAGKGS   43 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSS-EEEEEEEESTT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCC-ceEEEEECchh
Confidence            46899999999999999999999985 89999986655

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=95.43  E-value=0.15  Score=44.43  Aligned_cols=65  Identities=18%  Similarity=0.152  Sum_probs=47.5

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      ...|+|.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++..++..+ .|-...+.+++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   77 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKL--GSKVIIS--GSNEEKLKSLGNALKDNYTIEVCNLANKEECSN   77 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHhccCccEEEcCCCCHHHHHH
Confidence            44578999999999999999988876  5777764  368888888888887765554 34444444443

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.42  E-value=0.15  Score=43.86  Aligned_cols=45  Identities=22%  Similarity=0.212  Sum_probs=35.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..++.
T Consensus         7 ~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   51 (244)
T 1cyd_A            7 GLRALVTGAGKGIGRDTVKALHAS--GAKVVAVT--RTNSDLVSLAKEC   51 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHhc
Confidence            367999999999999999988875  57887764  5667766666554

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.36  E-value=0.1  Score=46.57  Aligned_cols=68  Identities=18%  Similarity=0.221  Sum_probs=42.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN  146 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~  146 (353)
                      +|+|.|.|+||.||....+-+.+.. .++|++++-+..-... +....-+.++ +..|-...+.+.+++.+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~R~~~~~~~-~~l~~~~~~~-~~~D~~d~~~l~~~~~~   72 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKKAA-KELRLQGAEV-VQGDQDDQVIMELALNG   72 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHC-SSEEEEEESCTTSHHH-HHHHHTTCEE-EECCTTCHHHHHHHHTT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcC-CceEEEEEcCCCCHHH-HHHHHCCCEE-EEecCCCHHHHHHHHhc
Confidence            4789999999999999999887753 2889998743322111 1122223333 33455556667766653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.36  E-value=0.12  Score=47.21  Aligned_cols=46  Identities=24%  Similarity=0.281  Sum_probs=33.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~e  123 (353)
                      +|+|.|.|+||.||...++-+.+.  .++|+++.-..  +.+.+.+..++
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~   74 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSL   74 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhh
Confidence            568999999999999999988875  58899886432  23444443333

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.35  E-value=0.077  Score=45.22  Aligned_cols=42  Identities=21%  Similarity=0.255  Sum_probs=33.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~  118 (353)
                      .+|+|.|.|+||.||....+-+.+.+..++|++++  ++-+.+.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~--r~~~~~~   44 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV--RSAQGKE   44 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE--SCHHHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE--cCCCchh
Confidence            35789999999999999999998876578999875  4555443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=95.34  E-value=0.12  Score=44.57  Aligned_cols=81  Identities=16%  Similarity=0.199  Sum_probs=52.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      |+|.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..+++..-.+...|-...+.+++.+.           
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----------   70 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAK--GYRVGLMA--RDEKRLQALAAELEGALPLPGDVREEGDWARAVA-----------   70 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHH-----------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHH-----------
Confidence            67999999999999999988875  57887754  5677777766665422233345555555554332           


Q ss_pred             HHHHHHHhcCCCCcEEEEec
Q 018600          157 EQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AI  176 (353)
                        .+.+.  ..++|+||+..
T Consensus        71 --~~~~~--~~~id~li~~A   86 (234)
T 2ehd_A           71 --AMEEA--FGELSALVNNA   86 (234)
T ss_dssp             --HHHHH--HSCCCEEEECC
T ss_pred             --HHHHH--cCCCCEEEECC
Confidence              12221  23689998863

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=95.34  E-value=0.16  Score=45.03  Aligned_cols=81  Identities=19%  Similarity=0.191  Sum_probs=56.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.++++.++...+ .|-...+.+++.+.         
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~---------   74 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVRE--GATVAIA--DIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIA---------   74 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH---------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHH---------
Confidence            468999999999999999988876  5777664  478899998888887776554 34444444444331         


Q ss_pred             ecHHHHHHHhcCCCCcEEEEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                          .+.  .+...+|++|+.
T Consensus        75 ----~~~--~~~g~id~lv~~   89 (259)
T 4e6p_A           75 ----ATV--EHAGGLDILVNN   89 (259)
T ss_dssp             ----HHH--HHSSSCCEEEEC
T ss_pred             ----HHH--HHcCCCCEEEEC
Confidence                111  123468888886

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.33  E-value=0.13  Score=45.85  Aligned_cols=85  Identities=16%  Similarity=0.098  Sum_probs=59.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+.++++..+...+ .|-...+.+++.+          
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~--~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~----------   95 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHAD--GLGVVIA--DLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAI----------   95 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHH----------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHH----------
Confidence            478999999999999999998876  5777764  468888888888887766554 3444444444432          


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCcc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCA  180 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~a  180 (353)
                            .++.+....|++|+...|+.
T Consensus        96 ------~~~~~~~~id~lv~~aag~~  115 (281)
T 3ppi_A           96 ------EAANQLGRLRYAVVAHGGFG  115 (281)
T ss_dssp             ------HHHTTSSEEEEEEECCCCCC
T ss_pred             ------HHHHHhCCCCeEEEccCccc
Confidence                  22223346888887655543

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=95.33  E-value=0.017  Score=55.32  Aligned_cols=37  Identities=22%  Similarity=0.387  Sum_probs=32.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      +.||+|+|+||-||+..++.+.++| .++|++++..++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p-~~elv~v~s~~~   40 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHP-YLEVKQVTSRRF   40 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCT-TEEEEEEBCSTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCC-CcEEEEEECchh
Confidence            5689999999999999999999987 499999876543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.30  E-value=0.11  Score=45.00  Aligned_cols=66  Identities=15%  Similarity=0.117  Sum_probs=43.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--CCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--SNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--sNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||....+-+.+.  .++|+++.-+  .+.+.+.++++...++..++ .|-...+.+++.
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   75 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQL   75 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            367999999999999999998875  5788876543  24555655555555544333 354444455543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=95.29  E-value=0.18  Score=43.60  Aligned_cols=63  Identities=17%  Similarity=0.158  Sum_probs=41.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|-+.+.+..++...-.+...|-...+.+++
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   69 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHAT--GARVVAVS--RTQADLDSLVRECPGIEPVCVDLGDWEATER   69 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHSTTCEEEECCTTCHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHcCCCCEEEEeCCCHHHHHH
Confidence            368999999999999999988875  57787754  5677776666655322223344443434433

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.22  E-value=0.14  Score=50.50  Aligned_cols=117  Identities=14%  Similarity=0.108  Sum_probs=68.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +|+|.|+| +|.||+.....+.+.  .++|+.  +.+|.+++.+.++++..-..+..|-...                  
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~--G~~V~v--~~R~~~~a~~la~~~~~~~~~~~Dv~d~------------------   59 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDS--GIKVTV--ACRTLESAKKLSAGVQHSTPISLDVNDD------------------   59 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTT--TCEEEE--EESSHHHHHHTTTTCTTEEEEECCTTCH------------------
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC--cCEEEE--EECCHHHHHHHHHhcCCceEEEeecCCH------------------
Confidence            47899999 799999999998864  367543  3567777666555553111111222212                  


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceee-cccchhHHhhhcCCeEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIA-GGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~-aG~li~~~a~~~~~~Il  222 (353)
                        +.+.++..  ++|+|+++..-...-.-..+++++|+.+.-.+   ... +-.-+.+.|++.|+.++
T Consensus        60 --~~l~~~l~--~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~---~~~~~~~~l~~aA~~aGv~~i  120 (450)
T 1ff9_A           60 --AALDAEVA--KHDLVISLIPYTFHATVIKSAIRQKKHVVTTS---YVSPAMMELDQAAKDAGITVM  120 (450)
T ss_dssp             --HHHHHHHT--TSSEEEECCC--CHHHHHHHHHHHTCEEEESS---CCCHHHHHTHHHHHHTTCEEE
T ss_pred             --HHHHHHHc--CCcEEEECCccccchHHHHHHHhCCCeEEEee---cccHHHHHHHHHHHHCCCeEE
Confidence              23334443  58999998643221122456788888765431   111 22345677788887765

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.20  E-value=0.12  Score=44.64  Aligned_cols=81  Identities=15%  Similarity=0.173  Sum_probs=50.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~---~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~  152 (353)
                      |++.|.|+||.||..+.+-+.+.  .++|+.+.. +|-+.+.   +++++..++...+ .|-...+.+++.+.       
T Consensus         2 k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   71 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYA-RSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMK-------   71 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEES-SCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHH-------
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcC-CCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHH-------
Confidence            57999999999999999998875  578877543 4444443   4444445554433 34444444544331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEe
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                            .+.  .+...+|+||+.
T Consensus        72 ------~~~--~~~g~id~li~~   86 (244)
T 1edo_A           72 ------TAI--DAWGTIDVVVNN   86 (244)
T ss_dssp             ------HHH--HHSSCCSEEEEC
T ss_pred             ------HHH--HHcCCCCEEEEC
Confidence                  111  123468999886

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=95.20  E-value=0.094  Score=47.11  Aligned_cols=33  Identities=9%  Similarity=0.267  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r   33 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDN   33 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeC
Confidence            578999999999999999988874  589999863

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.15  E-value=0.2  Score=44.13  Aligned_cols=81  Identities=17%  Similarity=0.176  Sum_probs=50.9

Q ss_pred             CeeEEEEecCCh-HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---C-CCEEEE-eCccchHHHHHHhhcCCC
Q 018600           76 PKPISVLGSTGS-IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---K-PQVVAV-RNESLLDEIKEALANVEE  149 (353)
Q Consensus        76 ~k~I~ILGSTGS-IGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---k-Pk~V~i-~de~~~~~l~~~l~~~~~  149 (353)
                      .|++.|.|+||| ||..+..-+.+.  .++|+.+.  +|.+.+.+..+++   . ++..++ .|-...+.+++.+.    
T Consensus        22 ~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~----   93 (266)
T 3o38_A           22 GKVVLVTAAAGTGIGSTTARRALLE--GADVVISD--YHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALIT----   93 (266)
T ss_dssp             TCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHH----
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHC--CCEEEEec--CCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHH----
Confidence            478999999997 999999988876  57777653  5666665555544   2 344333 35454555554432    


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                               .+.+  +...+|++|+.
T Consensus        94 ---------~~~~--~~g~id~li~~  108 (266)
T 3o38_A           94 ---------QTVE--KAGRLDVLVNN  108 (266)
T ss_dssp             ---------HHHH--HHSCCCEEEEC
T ss_pred             ---------HHHH--HhCCCcEEEEC
Confidence                     1111  12468898886

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=95.14  E-value=0.023  Score=54.27  Aligned_cols=38  Identities=24%  Similarity=0.462  Sum_probs=32.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaagsN  113 (353)
                      +.||+|+||||-||+..++.+.+++ ..++|++++..++
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~   41 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERS   41 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCC
Confidence            5689999999999999999999884 4699999986544

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=95.14  E-value=0.036  Score=51.63  Aligned_cols=53  Identities=13%  Similarity=0.121  Sum_probs=41.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAV  131 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv-~lL~~Q~~eFkPk~V~i  131 (353)
                      .+|.|.|++|.||..++.+.+..  ..+|++++...+- +...+.++++..+.+.-
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~  222 (364)
T 1gu7_A          169 DWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVIT  222 (364)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEE
T ss_pred             cEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeEEEe
Confidence            78999999999999999999976  5788888755542 44455668888887764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.09  E-value=0.17  Score=44.48  Aligned_cols=82  Identities=12%  Similarity=0.133  Sum_probs=52.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC--CEEE-EeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP--QVVA-VRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP--k~V~-i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .++.+.+.+.++++..  +... ..|-...+.+++.+.       
T Consensus        16 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   84 (278)
T 2bgk_A           16 DKVAIITGGAGGIGETTAKLFVRY--GAKVVIA--DIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVD-------   84 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--cCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH-------
Confidence            467999999999999999988875  5788876  4566776666666643  3332 345444445544331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            .+.+  ....+|+||+..
T Consensus        85 ------~~~~--~~~~id~li~~A  100 (278)
T 2bgk_A           85 ------TTIA--KHGKLDIMFGNV  100 (278)
T ss_dssp             ------HHHH--HHSCCCEEEECC
T ss_pred             ------HHHH--HcCCCCEEEECC
Confidence                  1111  123689998764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.08  E-value=0.17  Score=43.58  Aligned_cols=66  Identities=15%  Similarity=0.152  Sum_probs=43.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+..++  ..+.+.+++++..++...+ .|-...+.+++.
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENM   73 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            367999999999999999988876  57888874332  2344555555556665443 344444444443

>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*

Probab=95.07  E-value=0.035  Score=54.18  Aligned_cols=114  Identities=16%  Similarity=0.145  Sum_probs=62.3

Q ss_pred             ccCCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHH--HhhCCCE---EEEeCccchHHHHH
Q 018600           69 FRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQV--KRFKPQV---VAVRNESLLDEIKE  142 (353)
Q Consensus        69 ~~~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-gsNv~lL~~Q~--~eFkPk~---V~i~de~~~~~l~~  142 (353)
                      +|.+++.+.||+|.|+ |-||+..++++.++| +|+|+++.. ..+.+.++...  ..-.|++   +-..+..       
T Consensus        10 ~~~~~~~~ikVgI~G~-G~iGr~llR~l~~~p-~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~-------   80 (354)
T 3cps_A           10 GRENLYFQGTLGINGF-GRIGRLVLRACMERN-DITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKD-------   80 (354)
T ss_dssp             --------CEEEEECC-SHHHHHHHHHHHTCS-SCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-C-------
T ss_pred             cccCcCcceEEEEECC-CHHHHHHHHHHHcCC-CeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCE-------
Confidence            4566777889999999 999999999999987 499999997 77887665542  2222332   1111110       


Q ss_pred             HhhcCCCCcEEEecHHHHHHHh-cCCCCcEEEEeccCccCcHHHHHHHHcCC
Q 018600          143 ALANVEEKPEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAGK  193 (353)
Q Consensus       143 ~l~~~~~~~~v~~G~~gl~~~a-~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK  193 (353)
                       +.-.+..++++.-. ...++. ...++|+|+.+...+...+-.-..+++|.
T Consensus        81 -l~v~g~~i~v~~~~-dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~Ga  130 (354)
T 3cps_A           81 -LCINGKVVKVFQAK-DPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGA  130 (354)
T ss_dssp             -EEETTEEEEEECCS-CGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTC
T ss_pred             -EEECCeEEEEEecC-ChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCC
Confidence             00001111222110 111110 01257888888777777666666677774

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=95.06  E-value=0.017  Score=55.88  Aligned_cols=40  Identities=25%  Similarity=0.488  Sum_probs=34.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCC----ceEEEEEeecCCH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHED----KFRVVALAAGSNI  114 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd----~F~VvaLaagsNv  114 (353)
                      .++||+|+||||-||+..++.+.++|.    .++|++++..++.
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~a   51 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSA   51 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcC
Confidence            357899999999999999999999873    5999999866553

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=95.03  E-value=0.046  Score=50.92  Aligned_cols=91  Identities=23%  Similarity=0.314  Sum_probs=57.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .-++|.|.|+||.||..++.+.+..  ..+|++....  -+++ +.++++..+.+.-.+++..+.+              
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~--~~~~-~~~~~~ga~~v~~~~~~~~~~v--------------  219 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNR--TAAT-EFVKSVGADIVLPLEEGWAKAV--------------  219 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESS--GGGH-HHHHHHTCSEEEESSTTHHHHH--------------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCC--HHHH-HHHHhcCCcEEecCchhHHHHH--------------
Confidence            3468999999999999999999986  5688887643  2333 4566788887764432222222              


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                            .++.....+|+|+++..+ ..+...+.+++.
T Consensus       220 ------~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~  249 (342)
T 4eye_A          220 ------REATGGAGVDMVVDPIGG-PAFDDAVRTLAS  249 (342)
T ss_dssp             ------HHHTTTSCEEEEEESCC---CHHHHHHTEEE
T ss_pred             ------HHHhCCCCceEEEECCch-hHHHHHHHhhcC
Confidence                  223333368999998654 344444444433

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=95.01  E-value=0.18  Score=44.18  Aligned_cols=64  Identities=16%  Similarity=0.118  Sum_probs=47.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|-+.+.+.++++..+...+ .|-...+.+++.
T Consensus         9 ~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (261)
T 3n74_A            9 GKVALITGAGSGFGEGMAKRFAKG--GAKVVIV--DRDKAGAERVAGEIGDAALAVAADISKEADVDAA   73 (261)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHH
Confidence            468999999999999999988876  5777765  478888888888887776554 344444445443

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=95.00  E-value=0.06  Score=52.29  Aligned_cols=53  Identities=11%  Similarity=0.233  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRN  133 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~d  133 (353)
                      -.+|.|.|+||.||..++.+.+..  ..+|++++  ++-+++ +.++++..+.++-..
T Consensus       229 g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~--~~~~~~-~~~~~lGa~~vi~~~  281 (456)
T 3krt_A          229 GDNVLIWGASGGLGSYATQFALAG--GANPICVV--SSPQKA-EICRAMGAEAIIDRN  281 (456)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHHTCCEEEETT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEE--CCHHHH-HHHHhhCCcEEEecC
Confidence            368999999999999999999987  57888876  355555 466889988876543

>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O

Probab=94.98  E-value=0.098  Score=50.37  Aligned_cols=111  Identities=16%  Similarity=0.165  Sum_probs=67.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHH--HhhCCCE----EEEeCccchHHHHHHhhcCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQV--KRFKPQV----VAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-gsNv~lL~~Q~--~eFkPk~----V~i~de~~~~~l~~~l~~~~~  149 (353)
                      .||+|.|. |-||+..++.+.++|+ |+|+++.. ..+.+.+....  ..-.+++    +-..++..       +.-.+.
T Consensus         4 ikVgI~G~-GrIGr~l~R~l~~~p~-vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~-------l~~~g~   74 (337)
T 3e5r_O            4 IKIGINGF-GRIGRLVARVALQSED-VELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKT-------LLLGEK   74 (337)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSS-EEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSE-------EEETTE
T ss_pred             eEEEEECc-CHHHHHHHHHHhCCCC-eEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCe-------eEECCe
Confidence            48999999 9999999999999875 99999987 46777665554  2222321    11101110       000011


Q ss_pred             CcEEEecHHHHHHH-hcCCCCcEEEEeccCccCcHHHHHHHHcCCc-Eee
Q 018600          150 KPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD-IAL  197 (353)
Q Consensus       150 ~~~v~~G~~gl~~~-a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~-IaL  197 (353)
                      .++++.- ....++ ....++|+|+.+...+...+-...++++|++ +.+
T Consensus        75 ~i~v~~~-~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVI  123 (337)
T 3e5r_O           75 PVTVFGI-RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVI  123 (337)
T ss_dssp             EEEEECC-SCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred             EEEEEec-CChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEE
Confidence            1222221 111121 0113689999998888888888889999974 444

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=94.90  E-value=0.18  Score=45.18  Aligned_cols=34  Identities=21%  Similarity=0.326  Sum_probs=29.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +|+|.|.|+||+||...++-+.+.  .++|++++-.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~   35 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRS   35 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCC
Confidence            368999999999999999998875  5789998754

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=94.89  E-value=0.26  Score=43.58  Aligned_cols=84  Identities=19%  Similarity=0.094  Sum_probs=54.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.-+. ..+.+.+.+++...+...+ .|-...+.+++.+.        
T Consensus        34 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------  103 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETIS--------  103 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHH--------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHH--------
Confidence            467999999999999999988875  57888775332 3566666666666554443 35444555554432        


Q ss_pred             EecHHHHHHHhcCCCCcEEEEec
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                           .+.+-  ...+|+||+..
T Consensus       104 -----~~~~~--~g~id~li~~A  119 (279)
T 3ctm_A          104 -----QQEKD--FGTIDVFVANA  119 (279)
T ss_dssp             -----HHHHH--HSCCSEEEECG
T ss_pred             -----HHHHH--hCCCCEEEECC
Confidence                 11221  23589998853

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=94.88  E-value=0.082  Score=48.68  Aligned_cols=93  Identities=10%  Similarity=0.077  Sum_probs=58.9

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc-cchHHHHHHhhcCCCCcE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPE  152 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de-~~~~~l~~~l~~~~~~~~  152 (353)
                      ...++|.|.|++|.||..+..+++..  ..+|++..  +|-+++ +.++++..+.++-.+. +..+              
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~--~~~~~~-~~~~~~g~~~~~d~~~~~~~~--------------  204 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTV--STEEKA-ETARKLGCHHTINYSTQDFAE--------------  204 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHHTCSEEEETTTSCHHH--------------
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEe--CCHHHH-HHHHHcCCCEEEECCCHHHHH--------------
Confidence            34578999999999999999999986  46888765  344444 3456677776653222 1111              


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                            .+.+......+|+|+++..+ ..+...+.+++.|
T Consensus       205 ------~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~  237 (333)
T 1wly_A          205 ------VVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR  237 (333)
T ss_dssp             ------HHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE
T ss_pred             ------HHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC
Confidence                  22233323468999998655 5555555554443

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.85  E-value=0.19  Score=45.08  Aligned_cols=64  Identities=28%  Similarity=0.387  Sum_probs=46.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|-+.+.+..+++..+...+ .|-...+.+++.
T Consensus         6 ~k~vlITGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   70 (263)
T 2a4k_A            6 GKTILVTGAASGIGRAALDLFARE--GASLVAV--DREERLLAEAVAALEAEAIAVVADVSDPKAVEAV   70 (263)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHH
Confidence            468999999999999999998876  5788765  467788888888776555443 454445555543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=94.85  E-value=0.17  Score=43.44  Aligned_cols=65  Identities=17%  Similarity=0.130  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEE--EEeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVV--AVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V--~i~de~~~~~l~~~  143 (353)
                      +|++.|.|+||.||..+.+-+.+.  .++|+++. .+|.+.+.+.   +++..++..  ...|-...+.+++.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   70 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAED--GFALAIHY-GQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATAL   70 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHH
Confidence            468999999999999999988875  57888764 3455555443   333344433  33455545555543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=94.85  E-value=0.11  Score=45.40  Aligned_cols=64  Identities=14%  Similarity=0.110  Sum_probs=43.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..+++..+...+ .|-...+.+++.
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVGQ--GASAVLLD--LPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTA   76 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--CTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHH
Confidence            368999999999999999988876  57888764  34445555566665555443 344444445443

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=94.83  E-value=0.051  Score=48.59  Aligned_cols=54  Identities=11%  Similarity=0.108  Sum_probs=41.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----CCHHHHHHHHHhhCCCEEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----SNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----sNv~lL~~Q~~eFkPk~V~i  131 (353)
                      .|+|.|.|+||.||...++-+.+.  .++|+++.-.     .+.+.+.+..++++++.|+-
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih   61 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDELNLLDSRAVHDFFASERIDQVYL   61 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCccCCccCHHHHHHHHHhcCCCEEEE
Confidence            368999999999999999988764  5788886532     24566777777778988874

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=94.81  E-value=0.056  Score=48.53  Aligned_cols=32  Identities=22%  Similarity=0.447  Sum_probs=27.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ||+|.|.|+||+||....+-+.+.  .++|+++.
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~   32 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVD   32 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEe
Confidence            578999999999999999998875  58898875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.80  E-value=0.059  Score=48.01  Aligned_cols=34  Identities=18%  Similarity=0.260  Sum_probs=29.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +++|.|+|+||.||...++-+.+.  .++|++++-.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~   37 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRP   37 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECC
Confidence            578999999999999999988875  4889888644

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=94.71  E-value=0.22  Score=43.04  Aligned_cols=63  Identities=17%  Similarity=0.182  Sum_probs=42.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF----kPk~V~i-~de~~~~~l~~~  143 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..++.    .++...+ .|-...+.+++.
T Consensus         3 k~vlItGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   70 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLAR--GDRVAALD--LSAETLEETARTHWHAYADKVLRVRADVADEGDVNAA   70 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            67999999999999999988876  47777764  5666666555444    3343333 354444455443

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=94.68  E-value=0.028  Score=53.70  Aligned_cols=33  Identities=42%  Similarity=0.738  Sum_probs=30.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .||+|+|+||-||+..++.+.++| .|+|+++..
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p-~~ev~~i~~   41 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHP-MFELTALAA   41 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCS-SEEEEEEEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCC-CCEEEEEEc
Confidence            689999999999999999999987 599999964

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=94.65  E-value=0.33  Score=43.33  Aligned_cols=82  Identities=12%  Similarity=0.174  Sum_probs=52.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-eCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF----kPk~V~i-~de~~~~~l~~~l~~~~~~  150 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..++.    .++...+ .|-...+.++..+.     
T Consensus        26 ~k~vlITGasggiG~~la~~L~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   96 (302)
T 1w6u_A           26 GKVAFITGGGTGLGKGMTTLLSSL--GAQCVIAS--RKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS-----   96 (302)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHH-----
Confidence            367999999999999999998876  57787754  5666665554443    4454433 35444555554432     


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                              .+.+  ....+|+||+..
T Consensus        97 --------~~~~--~~g~id~li~~A  112 (302)
T 1w6u_A           97 --------ELIK--VAGHPNIVINNA  112 (302)
T ss_dssp             --------HHHH--HTCSCSEEEECC
T ss_pred             --------HHHH--HcCCCCEEEECC
Confidence                    1121  234689998864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=94.64  E-value=0.26  Score=44.19  Aligned_cols=82  Identities=18%  Similarity=0.251  Sum_probs=51.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++  .+|.+.+.+.   +++..++...+ .|-...+.+++.+.      
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~------  113 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKS--VSHVICI--SRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVIN------  113 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTT--SSEEEEE--ESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHc--CCEEEEE--cCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHH------
Confidence            468999999999999999988765  5788873  4555555444   44445554443 45444445554331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.  .....+|+||+..
T Consensus       114 -------~~~--~~~~~id~li~~A  129 (285)
T 2c07_A          114 -------KIL--TEHKNVDILVNNA  129 (285)
T ss_dssp             -------HHH--HHCSCCCEEEECC
T ss_pred             -------HHH--HhcCCCCEEEECC
Confidence                   111  1234689988863

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=94.64  E-value=0.06  Score=47.61  Aligned_cols=51  Identities=27%  Similarity=0.408  Sum_probs=40.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--------CCHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--------SNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--------sNv~lL~~Q~~eFkPk~V~i  131 (353)
                      +|.|.|+||.||...++-+. .  .++|+++.-.        .+.+.+.+..+..+++.|+-
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih   60 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-P--VGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN   60 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-c--CCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEE
Confidence            69999999999999998877 3  6999998633        24566777777778888874

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=94.64  E-value=0.12  Score=45.92  Aligned_cols=64  Identities=17%  Similarity=0.170  Sum_probs=45.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      +|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+...++..+...+ .|-...+.+++.
T Consensus         5 ~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~   69 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTA--RRTEALDDLVAAYPDRAEAISLDVTDGERIDVV   69 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHhccCCceEEEeeCCCHHHHHHH
Confidence            478999999999999999988875  57887764  55667777777776665544 344444444443

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=94.64  E-value=0.063  Score=49.40  Aligned_cols=55  Identities=16%  Similarity=0.166  Sum_probs=42.4

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEe
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~  132 (353)
                      ...++|.|.|+||.||..+..+.+..  ..+|++..  +|-+++...++++..+.+.-.
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~--~~~~~~~~~~~~~g~~~~~~~  202 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIA--GGAEKCRFLVEELGFDGAIDY  202 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHTTCCSEEEET
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHcCCCEEEEC
Confidence            34478999999999999999999976  56888764  455666655588888776543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=94.63  E-value=0.19  Score=43.68  Aligned_cols=64  Identities=17%  Similarity=0.220  Sum_probs=41.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+   ++++..++...+ .|-...+.+++.
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   80 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEA--GARVIIAD--LDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNA   80 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            367999999999999999988876  57888765  45554443   344444554433 344444444443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.60  E-value=0.24  Score=43.58  Aligned_cols=80  Identities=19%  Similarity=0.185  Sum_probs=53.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|-+.+.+..++.. -.+...|-...+.+++.+.          
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~----------   69 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKE--GARLVAC--DIEEGPLREAAEAVG-AHPVVMDVADPASVERGFA----------   69 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHTTT-CEEEECCTTCHHHHHHHHH----------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHcC-CEEEEecCCCHHHHHHHHH----------
Confidence            368999999999999999988875  6788775  367788877777664 2333345555555554432          


Q ss_pred             cHHHHHHHhcCCCCcEEEEe
Q 018600          156 GEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~A  175 (353)
                         .+.+  +...+|++|+.
T Consensus        70 ---~~~~--~~g~id~lvn~   84 (245)
T 1uls_A           70 ---EALA--HLGRLDGVVHY   84 (245)
T ss_dssp             ---HHHH--HHSSCCEEEEC
T ss_pred             ---HHHH--HcCCCCEEEEC
Confidence               1121  12368999986

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=94.59  E-value=0.04  Score=53.15  Aligned_cols=36  Identities=28%  Similarity=0.568  Sum_probs=31.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      .||+|+|+||-||...++.+.++|+ |+|++++..+.
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~-~elvai~~~~~   52 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPH-FQVTLMTADRK   52 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSS-EEEEEEBCSTT
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCC-cEEEEEeCchh
Confidence            5899999999999999999999874 99999976543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=94.57  E-value=0.065  Score=45.99  Aligned_cols=54  Identities=20%  Similarity=0.293  Sum_probs=38.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC------------CHHHHHHHHHhh--CCCEEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS------------NITLLADQVKRF--KPQVVAV  131 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags------------Nv~lL~~Q~~eF--kPk~V~i  131 (353)
                      ||+|.|.|+||.||..+.+-+.+.  .++|+++.-..            +.+.+.+.+++|  +++.++-
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhHccccccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            578999999999999999988875  57888875321            123445555566  7777764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=94.57  E-value=0.11  Score=47.69  Aligned_cols=90  Identities=8%  Similarity=0.093  Sum_probs=57.6

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCcc-chHHHHHHhhcCCCCcE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPE  152 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~-~~~~l~~~l~~~~~~~~  152 (353)
                      ...++|.|.|++|.||..++.+.+..  ..+|++...  |-+++ +.++++..+.+.-.+.. ..+.+            
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~--~~~~~-~~~~~~Ga~~~~~~~~~~~~~~~------------  201 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVS--SPEKA-AHAKALGAWETIDYSHEDVAKRV------------  201 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEES--SHHHH-HHHHHHTCSEEEETTTSCHHHHH------------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeC--CHHHH-HHHHHcCCCEEEeCCCccHHHHH------------
Confidence            34478999999999999999999976  468887653  44554 35677887776543322 22222            


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHH
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAI  189 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai  189 (353)
                              .++.....+|+|+++..+ ..+...+.++
T Consensus       202 --------~~~~~~~g~Dvvid~~g~-~~~~~~~~~l  229 (325)
T 3jyn_A          202 --------LELTDGKKCPVVYDGVGQ-DTWLTSLDSV  229 (325)
T ss_dssp             --------HHHTTTCCEEEEEESSCG-GGHHHHHTTE
T ss_pred             --------HHHhCCCCceEEEECCCh-HHHHHHHHHh
Confidence                    233333468999998654 4444443333

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=94.57  E-value=0.2  Score=44.05  Aligned_cols=65  Identities=22%  Similarity=0.202  Sum_probs=43.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-+.. +.+.+++++...+...+ .|-...+.+++.
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~   69 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEAL   69 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            368999999999999999998875  578887654444 55555665555555443 344444444443

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=94.56  E-value=0.23  Score=43.84  Aligned_cols=81  Identities=19%  Similarity=0.119  Sum_probs=50.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC----C-CEEEE-eCccchHHHHHHhhcCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK----P-QVVAV-RNESLLDEIKEALANVEE  149 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk----P-k~V~i-~de~~~~~l~~~l~~~~~  149 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..++++    . +...+ .|-...+.+++.+     
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~-----   77 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARN--GARLLLFS--RNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLF-----   77 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHH-----
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHH-----
Confidence            368999999999999999988876  57787753  56666665555442    2 33332 4544444444432     


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                                 .++.+...+|+||+..
T Consensus        78 -----------~~~~~~~gid~lv~~A   93 (260)
T 2z1n_A           78 -----------EKARDLGGADILVYST   93 (260)
T ss_dssp             -----------HHHHHTTCCSEEEECC
T ss_pred             -----------HHHHHhcCCCEEEECC
Confidence                       2222232389998863

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=94.55  E-value=0.088  Score=44.54  Aligned_cols=51  Identities=16%  Similarity=0.213  Sum_probs=37.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~  130 (353)
                      ..++|.|.|++|.||..+....+..  ..+|++..  +|-+.+ +.++++..+.++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~--~~~~~~-~~~~~~g~~~~~   88 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMI--GARIYTTA--GSDAKR-EMLSRLGVEYVG   88 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEE--SSHHHH-HHHHTTCCSEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHHcCCCEEe
Confidence            3468999999999999999999876  46787764  454544 345667666554

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=94.54  E-value=0.26  Score=43.23  Aligned_cols=81  Identities=17%  Similarity=0.166  Sum_probs=54.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..+++..+...+ .|-...+.+++.+.         
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~---------   69 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVER--GHQVSMM--GRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFA---------   69 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHH---------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHH---------
Confidence            478999999999999999988876  5777764  467788888777775444333 34444445554331         


Q ss_pred             ecHHHHHHHhcCCCCcEEEEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                          .+.+  ....+|++|+.
T Consensus        70 ----~~~~--~~g~id~lvnn   84 (235)
T 3l6e_A           70 ----AAVE--WGGLPELVLHC   84 (235)
T ss_dssp             ----HHHH--HHCSCSEEEEE
T ss_pred             ----HHHH--hcCCCcEEEEC
Confidence                1121  22468999886

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=94.51  E-value=0.26  Score=42.65  Aligned_cols=65  Identities=18%  Similarity=0.119  Sum_probs=41.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHh-CCCceEEEEEeecCCHHHHHHHHHhh---CCCEE-EEeCccchHHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAE-HEDKFRVVALAAGSNITLLADQVKRF---KPQVV-AVRNESLLDEIKEA  143 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~-~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V-~i~de~~~~~l~~~  143 (353)
                      ..|++.|.|+||.||..+..-+.+ .  .++|+.+.  +|.+.+.+..+++   ..+.. ...|-...+.+++.
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~   72 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTA--RDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRAL   72 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEE--SSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEe--CChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHH
Confidence            357899999999999999998887 5  46777654  4555554444433   33332 23454444444443

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=94.50  E-value=0.082  Score=49.18  Aligned_cols=50  Identities=18%  Similarity=0.127  Sum_probs=37.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~  130 (353)
                      ++|.|.|++|.||..++...+..  .. +|++..  ++-+++....+++..+.++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~--~~~~~~~~~~~~~g~~~~~  212 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFL--GCSRVVGIC--GTHEKCILLTSELGFDAAI  212 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEE--SCHHHHHHHHHTSCCSEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEe--CCHHHHHHHHHHcCCceEE
Confidence            78999999999999999999976  56 787754  4555555444457777655

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=94.50  E-value=0.23  Score=43.79  Aligned_cols=81  Identities=15%  Similarity=0.110  Sum_probs=54.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++.++...+ .|-...+.+++.+.         
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~---------   72 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGE--GAKVAFS--DINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMA---------   72 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--CSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHH---------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHH---------
Confidence            467999999999999999998876  5777765  467788877777776555444 34444444444331         


Q ss_pred             ecHHHHHHHhcCCCCcEEEEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                          .+.+  +...+|++|+.
T Consensus        73 ----~~~~--~~g~id~lv~~   87 (253)
T 1hxh_A           73 ----AVQR--RLGTLNVLVNN   87 (253)
T ss_dssp             ----HHHH--HHCSCCEEEEC
T ss_pred             ----HHHH--HcCCCCEEEEC
Confidence                1222  12358999886

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=94.50  E-value=0.05  Score=48.32  Aligned_cols=34  Identities=24%  Similarity=0.312  Sum_probs=27.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||+||....+-+.+.+..++|+++.-
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r   36 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDI   36 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence            5799999999999999998876533578888763

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=94.47  E-value=0.3  Score=43.03  Aligned_cols=64  Identities=17%  Similarity=0.249  Sum_probs=42.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF----kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..+++    ..+...+ .|-...+.+++.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   75 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKE--GAHIVLVA--RQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAV   75 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            368999999999999999998876  57787753  5666665544443    4554443 354444455543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=94.46  E-value=0.14  Score=46.41  Aligned_cols=35  Identities=26%  Similarity=0.350  Sum_probs=29.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      .+|+|.|.|+||+||...++-+.+.  .++|+++.-.
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~   58 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNF   58 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCC
Confidence            3578999999999999999988875  5889998743

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=94.44  E-value=0.17  Score=43.81  Aligned_cols=63  Identities=17%  Similarity=0.142  Sum_probs=41.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+   ++++..++...+ .|-...+.+++
T Consensus        11 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   77 (255)
T 1fmc_A           11 GKCAIITGAGAGIGKEIAITFATA--GASVVVSD--INADAANHVVDEIQQLGGQAFACRCDITSEQELSA   77 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHH
Confidence            367999999999999999988875  57888764  45555544   334445554443 34444444444

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=94.44  E-value=0.24  Score=43.68  Aligned_cols=64  Identities=13%  Similarity=0.084  Sum_probs=44.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+..+++..+... ..|-...+.+++.
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~   76 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKA--GATVAIAD--LDVMAAQAVVAGLENGGFAVEVDVTKRASVDAA   76 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHH
Confidence            367999999999999999988875  57787653  5777777777666543332 2444444444443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=94.41  E-value=0.22  Score=42.93  Aligned_cols=64  Identities=14%  Similarity=0.140  Sum_probs=43.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh----hCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR----FKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e----FkPk~V~i-~de~~~~~l~~~  143 (353)
                      +|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.+++    ...+..++ .|-...+.+++.
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   70 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARD--GYALALG--ARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEF   70 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHH
Confidence            578999999999999999988876  5776654  3566666655543    34555444 355555555544

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=94.40  E-value=0.24  Score=44.35  Aligned_cols=64  Identities=17%  Similarity=0.147  Sum_probs=43.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|-+.+.+..++...-.+...|-...+.+++.
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   72 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNS--GARVVIC--DKDESGGRALEQELPGAVFILCDVTQEDDVKTL   72 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHH
Confidence            467999999999999999998876  5788765  367777776666654222333454445555543

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=94.39  E-value=0.12  Score=48.39  Aligned_cols=53  Identities=15%  Similarity=0.167  Sum_probs=39.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      ...++|.|.|++|.||..++.+++..  ..+|++..  ++-+++. .++++..+.++-
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~--~~~~~~~-~~~~~ga~~~~d  221 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAY--GLKILGTA--GTEEGQK-IVLQNGAHEVFN  221 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHH-HHHHTTCSEEEE
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CChhHHH-HHHHcCCCEEEe
Confidence            34478999999999999999999986  46888765  3445544 667888776653

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=94.37  E-value=0.27  Score=44.46  Aligned_cols=66  Identities=18%  Similarity=0.248  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-+. ..+.+.+++++...+...+ .|-...+.+++.
T Consensus        32 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~   99 (276)
T 3r1i_A           32 GKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGM   99 (276)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            367999999999999999988876  57777654221 2344555555555554443 354444555543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=94.36  E-value=0.62  Score=41.44  Aligned_cols=82  Identities=21%  Similarity=0.147  Sum_probs=50.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+.   +++..++..++ .|-...+.+++.+.      
T Consensus        31 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~------  100 (272)
T 1yb1_A           31 GEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWD--INKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAK------  100 (272)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEE--cCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHH------
Confidence            468999999999999999998876  57787754  455555444   33334454333 35444444444321      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.  ....++|+||+..
T Consensus       101 -------~~~--~~~g~iD~li~~A  116 (272)
T 1yb1_A          101 -------KVK--AEIGDVSILVNNA  116 (272)
T ss_dssp             -------HHH--HHTCCCSEEEECC
T ss_pred             -------HHH--HHCCCCcEEEECC
Confidence                   111  1234689998873

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=94.34  E-value=0.043  Score=47.38  Aligned_cols=31  Identities=19%  Similarity=0.324  Sum_probs=27.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |+|.|.|+||.||....+-+.+.  .++|++++
T Consensus        22 ~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~   52 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSELKNK--GHEPVAMV   52 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhC--CCeEEEEE
Confidence            56999999999999999998875  58898886

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=94.33  E-value=0.36  Score=41.53  Aligned_cols=82  Identities=17%  Similarity=0.103  Sum_probs=50.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh----hCCCEEEE-eCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR----FKPQVVAV-RNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e----FkPk~V~i-~de~~~~~l~~~l~~~~~~  150 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|-+.+.+..++    +.++...+ .|-...+.+++.+.     
T Consensus         7 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----   77 (248)
T 2pnf_A            7 GKVSLVTGSTRGIGRAIAEKLASA--GSTVIITG--TSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFE-----   77 (248)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHH-----
Confidence            367999999999999999988875  57887764  455555444333    34444433 34444444444331     


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                              .+.  ....++|+|++..
T Consensus        78 --------~~~--~~~~~~d~vi~~A   93 (248)
T 2pnf_A           78 --------EIY--NLVDGIDILVNNA   93 (248)
T ss_dssp             --------HHH--HHSSCCSEEEECC
T ss_pred             --------HHH--HhcCCCCEEEECC
Confidence                    111  1234689998863

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=94.29  E-value=0.3  Score=43.19  Aligned_cols=64  Identities=11%  Similarity=0.082  Sum_probs=44.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+..+++.++...+ .|-...+.+++.
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   69 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAA--GARVVLAD--VLDEEGAATARELGDAARYQHLDVTIEEDWQRV   69 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhCCceeEEEecCCCHHHHHHH
Confidence            467999999999999999998876  57777653  57788877777765444433 344444444443

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=94.28  E-value=0.15  Score=47.52  Aligned_cols=77  Identities=17%  Similarity=0.178  Sum_probs=51.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .-++|.|.|++|.||..++.+.+..  ..+|++.   .+-+++ +.++++..+.+ ..+++..+.++             
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~---~~~~~~-~~~~~lGa~~i-~~~~~~~~~~~-------------  209 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT---ARGSDL-EYVRDLGATPI-DASREPEDYAA-------------  209 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE---ECHHHH-HHHHHHTSEEE-ETTSCHHHHHH-------------
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE---eCHHHH-HHHHHcCCCEe-ccCCCHHHHHH-------------
Confidence            3468999999999999999999976  5688887   234443 46788888773 23332222222             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVG  178 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG  178 (353)
                             +......+|+|+++..|
T Consensus       210 -------~~~~~~g~D~vid~~g~  226 (343)
T 3gaz_A          210 -------EHTAGQGFDLVYDTLGG  226 (343)
T ss_dssp             -------HHHTTSCEEEEEESSCT
T ss_pred             -------HHhcCCCceEEEECCCc
Confidence                   22333468999997543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=94.27  E-value=0.15  Score=45.52  Aligned_cols=38  Identities=21%  Similarity=0.382  Sum_probs=30.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL  117 (353)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.  ++.+.+
T Consensus        11 ~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~--r~~~~~   48 (342)
T 1y1p_A           11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTA--RSASKL   48 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEe--CCcccH
Confidence            367999999999999999988875  58888875  344443

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=94.25  E-value=0.12  Score=46.06  Aligned_cols=57  Identities=14%  Similarity=0.257  Sum_probs=38.2

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC---------------CHHHHHHHHHhhCCCEEEE
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS---------------NITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags---------------Nv~lL~~Q~~eFkPk~V~i  131 (353)
                      ..++|+|.|.|+||.||....+-+.+.  .++|+++.-..               +.+.+.+..+..+++.|+-
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   80 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFH   80 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            345689999999999999999988875  57888875321               3344555555555666653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=94.25  E-value=0.34  Score=42.07  Aligned_cols=82  Identities=20%  Similarity=0.178  Sum_probs=51.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.   +.+.+++..++...+ .|-...+.+++.+.      
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   74 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASK--GATVVGTA--TSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFA------   74 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH------
Confidence            468999999999999999988876  57777654  44444   444455555555444 35444445554331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.  .+...+|+||+..
T Consensus        75 -------~~~--~~~~~id~li~~A   90 (247)
T 3lyl_A           75 -------EIK--AENLAIDILVNNA   90 (247)
T ss_dssp             -------HHH--HTTCCCSEEEECC
T ss_pred             -------HHH--HHcCCCCEEEECC
Confidence                   111  2234689988873

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=94.24  E-value=0.041  Score=49.19  Aligned_cols=31  Identities=26%  Similarity=0.348  Sum_probs=27.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||.|.|+||+||+...+-+.+.  .++|++|+=
T Consensus         2 kILVTGatGfIG~~L~~~L~~~--G~~V~~l~R   32 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNAR--GHEVTLVSR   32 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHHC--CCEEEEEEC
Confidence            5999999999999999888764  689999973

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=94.22  E-value=0.39  Score=41.72  Aligned_cols=83  Identities=18%  Similarity=0.148  Sum_probs=50.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHH-HHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNIT-LLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-sNv~-lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+++.-. ...+ .+.+..+++.++...+ .|-...+.+++.+.       
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   84 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ-------   84 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH-------
Confidence            478999999999999999988875  6888887632 2222 2333334455555443 35444455554332       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEe
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                            .+.  .....+|+||+.
T Consensus        85 ------~~~--~~~~~id~li~~   99 (265)
T 1h5q_A           85 ------QID--ADLGPISGLIAN   99 (265)
T ss_dssp             ------HHH--HHSCSEEEEEEC
T ss_pred             ------HHH--HhcCCCCEEEEC
Confidence                  111  123468888876

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=94.21  E-value=0.52  Score=42.22  Aligned_cols=44  Identities=18%  Similarity=0.188  Sum_probs=33.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..++
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~   61 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLEL--GSNVVIAS--RKLERLKSAADE   61 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            478999999999999999988875  57777654  566666554444

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=94.20  E-value=0.24  Score=44.80  Aligned_cols=82  Identities=13%  Similarity=0.219  Sum_probs=56.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .|.+.|.|+||-||..+..-+.+.  .++|+.+  .+|.+.+.+.++++..+..++ .|-...+.+++.+.         
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~---------   94 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGA--GYGVALA--GRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFT---------   94 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHH---------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHH---------
Confidence            467899999999999999988876  5777764  467888888888887665554 34444444544331         


Q ss_pred             ecHHHHHHHhcCCCCcEEEEec
Q 018600          155 AGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                          .+.+  +...+|++|+..
T Consensus        95 ----~~~~--~~g~iD~lVnnA  110 (272)
T 4dyv_A           95 ----ATVE--KFGRVDVLFNNA  110 (272)
T ss_dssp             ----HHHH--HHSCCCEEEECC
T ss_pred             ----HHHH--HcCCCCEEEECC
Confidence                1111  123689998863

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=94.19  E-value=0.37  Score=42.10  Aligned_cols=88  Identities=14%  Similarity=0.061  Sum_probs=55.2

Q ss_pred             CCCCCeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCC
Q 018600           72 TWDGPKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        72 ~~~~~k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaag-sNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      .+...|++.|.|+|  |.||..+..-+.+.  .++|+.+.-+ ++.+.+.+..+++.--.+...|-...+.++..+.   
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~---   84 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFA---   84 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH---
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHH---
Confidence            34556889999988  99999999988876  5777766432 2345555555555432333455555555554432   


Q ss_pred             CCcEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          149 EKPEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                                .+.  .+...+|++|+..
T Consensus        85 ----------~~~--~~~g~id~lv~nA  100 (271)
T 3ek2_A           85 ----------SLK--THWDSLDGLVHSI  100 (271)
T ss_dssp             ----------HHH--HHCSCEEEEEECC
T ss_pred             ----------HHH--HHcCCCCEEEECC
Confidence                      111  2234789998863

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=94.17  E-value=0.29  Score=43.96  Aligned_cols=63  Identities=22%  Similarity=0.182  Sum_probs=46.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.++++..+...+ .|-...+.+++
T Consensus        27 gk~vlVTGas~gIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   90 (266)
T 3grp_A           27 GRKALVTGATGGIGEAIARCFHAQ--GAIVGLH--GTREDKLKEIAADLGKDVFVFSANLSDRKSIKQ   90 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCceEEEEeecCCHHHHHH
Confidence            368999999999999999988876  5677654  467888888888887776655 34444444444

>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*

Probab=94.17  E-value=0.22  Score=48.21  Aligned_cols=110  Identities=14%  Similarity=0.177  Sum_probs=66.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhC--CCceEEEEEeecCCHHHHHHHHHh------hCCCEEEEeCccchHHHHHHhhcCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEH--EDKFRVVALAAGSNITLLADQVKR------FKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~--pd~F~VvaLaagsNv~lL~~Q~~e------FkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      .||+|.|+ |-||+..++.+.++  | .++|+++.--...+-++...+-      |..+ |...++..       +.-.+
T Consensus         2 ikVgInG~-G~IGr~llR~l~~~~~p-~~eivaInd~~~~~~~a~ll~sds~~G~~~~~-v~~~~~~~-------l~v~g   71 (337)
T 1rm4_O            2 LKVAINGF-GRIGRNFLRCWHGRKDS-PLDVVVINDTGGVKQASHLLKYDSILGTFDAD-VKTAGDSA-------ISVDG   71 (337)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSSC-SEEEEEEECTTCHHHHHHHHHCCTTTCSCSSC-EEECTTSE-------EEETT
T ss_pred             eEEEEECC-CHHHHHHHHHHHhCCCC-CeEEEEEEcCCCHHHHHHHhcccccCCCccce-eEEecCCe-------EEECC
Confidence            58999999 99999999999987  5 5999999866667766665542      2221 11111100       00001


Q ss_pred             CCcEEEecHHHHHHH-hcCCCCcEEEEeccCccCcHHHHHHHHcCCc-Eee
Q 018600          149 EKPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD-IAL  197 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~-a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~-IaL  197 (353)
                      ....++.-.+ ..++ ....++|+|+.+.-.+...+-.-..+++|.+ |-+
T Consensus        72 ~~i~v~~~~d-p~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~i  121 (337)
T 1rm4_O           72 KVIKVVSDRN-PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI  121 (337)
T ss_dssp             EEEEEECCSC-GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEE
T ss_pred             eEEEEEecCC-hhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEE
Confidence            1122222111 1111 0112589999998888888888888898844 444

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=94.16  E-value=0.28  Score=43.09  Aligned_cols=64  Identities=13%  Similarity=0.118  Sum_probs=43.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv-~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|. +.+.+++++..++...+ .|-...+.+++.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   72 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVE--GADIAIAD--LVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAF   72 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEc--CCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            367999999999999999988875  57887764  344 66666666666665443 344444444443

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=94.10  E-value=0.22  Score=44.09  Aligned_cols=83  Identities=16%  Similarity=0.215  Sum_probs=55.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |++.|.|+||.||..+..-+.+....+.|+..  .+|-+.+.+..+++..+..++ .|-...+.+++.+.          
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~----------   70 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGV--ARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVN----------   70 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEE--ESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHH----------
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEe--cCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHH----------
Confidence            67999999999999999888765445677653  467888888888776666554 35444445544331          


Q ss_pred             cHHHHHHHhcCCCCcEEEEec
Q 018600          156 GEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                         .+.+  +...+|++|+..
T Consensus        71 ---~~~~--~~g~id~lvnnA   86 (254)
T 3kzv_A           71 ---AAVK--GHGKIDSLVANA   86 (254)
T ss_dssp             ---HHHH--HHSCCCEEEEEC
T ss_pred             ---HHHH--hcCCccEEEECC
Confidence               1111  224689998873

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=94.10  E-value=0.26  Score=43.87  Aligned_cols=43  Identities=19%  Similarity=0.337  Sum_probs=32.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..+
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~   74 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQ--GLKVVGCA--RTVGNIEELAA   74 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEE--CChHHHHHHHH
Confidence            368999999999999999998875  57887764  56555544433

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=94.09  E-value=0.26  Score=44.15  Aligned_cols=65  Identities=18%  Similarity=0.217  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--HHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--ITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN--v~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-+..  .+.+.+.+++...+..++ .|-...+.++.
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   96 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVR   96 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHH
Confidence            378999999999999999999876  678877653321  233444455555555444 34444444444

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=94.08  E-value=0.04  Score=46.92  Aligned_cols=33  Identities=27%  Similarity=0.490  Sum_probs=28.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||+|.|+|+||.||...++-+.+.  .++|++++-
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r   36 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVR   36 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECS
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEc
Confidence            678999999999999999999876  488998863

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=94.00  E-value=0.42  Score=43.15  Aligned_cols=64  Identities=17%  Similarity=0.170  Sum_probs=47.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+.+++...+...+ .|-...+.+++.
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   91 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAKN--GAYVVVAD--VNEDAAVRVANEIGSKAFGVRVDVSSAKDAESM   91 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhCCceEEEEecCCCHHHHHHH
Confidence            478999999999999999988876  57777653  67888888888887776554 344444444443

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=93.99  E-value=0.21  Score=46.67  Aligned_cols=92  Identities=8%  Similarity=0.094  Sum_probs=57.6

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc-cchHHHHHHhhcCCCCcE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPE  152 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de-~~~~~l~~~l~~~~~~~~  152 (353)
                      ..-++|.|.|++|.||..++.+++..  ..+|++..  +|-+++. .++++..+.++-.+. +..+.             
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~--~~~~~~~-~~~~~g~~~~~~~~~~~~~~~-------------  222 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTA--GSQKKLQ-MAEKLGAAAGFNYKKEDFSEA-------------  222 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHH-HHHHHTCSEEEETTTSCHHHH-------------
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEe--CCHHHHH-HHHHcCCcEEEecCChHHHHH-------------
Confidence            33468999999999999999999986  56887755  3445554 347788776653322 11122             


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                             +.+......+|+|+++..+ ..+...+.+++.
T Consensus       223 -------~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~  253 (354)
T 2j8z_A          223 -------TLKFTKGAGVNLILDCIGG-SYWEKNVNCLAL  253 (354)
T ss_dssp             -------HHHHTTTSCEEEEEESSCG-GGHHHHHHHEEE
T ss_pred             -------HHHHhcCCCceEEEECCCc-hHHHHHHHhccC
Confidence                   2222222368999998654 344444444433

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=93.99  E-value=0.44  Score=42.62  Aligned_cols=64  Identities=19%  Similarity=0.230  Sum_probs=43.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF----kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.++++    ..+...+ .|-...+.++..
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   89 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEA--GCSVVVAS--RNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKL   89 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            367999999999999999998876  57877653  5666665554443    5555443 354444445443

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=93.98  E-value=0.34  Score=42.70  Aligned_cols=64  Identities=17%  Similarity=0.101  Sum_probs=47.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.++++..+...+ .|-...+.+++.
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   70 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAAD--GATVIVS--DINAEGAKAAAASIGKKARAIAADISDPGSVKAL   70 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--CSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHH
Confidence            468999999999999999998876  5777764  578888888888887776554 344444444443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=93.98  E-value=0.37  Score=42.60  Aligned_cols=81  Identities=17%  Similarity=0.173  Sum_probs=54.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..++++.+...+ .|-...+.+++.+...        
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--------   68 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQ--GHKVIAT--GRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASL--------   68 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTS--------
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHH--------
Confidence            57899999999999999988875  5777765  467788887777776555443 3544444444433211        


Q ss_pred             cHHHHHHHhcCCCCcEEEEec
Q 018600          156 GEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             ..+...+|++|+..
T Consensus        69 -------~~~~g~iD~lvnnA   82 (248)
T 3asu_A           69 -------PAEWCNIDILVNNA   82 (248)
T ss_dssp             -------CTTTCCCCEEEECC
T ss_pred             -------HHhCCCCCEEEECC
Confidence                   01123689999863

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=93.97  E-value=0.32  Score=43.08  Aligned_cols=82  Identities=18%  Similarity=0.179  Sum_probs=52.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..+++   .++...+ .|-...+.+++.+.      
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~------   98 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGSL--GARVVLT--ARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFAT------   98 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHH------
Confidence            378999999999999999888876  5777765  35666665555443   4544443 35555555554432      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.+  ....+|+||+..
T Consensus        99 -------~~~~--~~g~id~lv~~A  114 (262)
T 3rkr_A           99 -------GVLA--AHGRCDVLVNNA  114 (262)
T ss_dssp             -------HHHH--HHSCCSEEEECC
T ss_pred             -------HHHH--hcCCCCEEEECC
Confidence                   1222  224689998863

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=93.96  E-value=0.33  Score=41.95  Aligned_cols=82  Identities=17%  Similarity=0.098  Sum_probs=52.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC--CCEEE-EeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK--PQVVA-VRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk--Pk~V~-i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|.+.+.+..++.+  ++... ..|-...+.+++.+.       
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------   74 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEE--GAKVMITG--RHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFD-------   74 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH-------
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHH-------
Confidence            467999999999999999988875  57787754  56677766666554  33333 234444444444331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            .+.+.  ...+|+||+..
T Consensus        75 ------~~~~~--~~~id~li~~A   90 (251)
T 1zk4_A           75 ------ATEKA--FGPVSTLVNNA   90 (251)
T ss_dssp             ------HHHHH--HSSCCEEEECC
T ss_pred             ------HHHHH--hCCCCEEEECC
Confidence                  12221  23588988863

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=93.95  E-value=0.57  Score=41.21  Aligned_cols=81  Identities=19%  Similarity=0.089  Sum_probs=50.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHHhhcCCCCcE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~l~~~~~~~~  152 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..+++   ..+...+ .|-...+.+++.+.       
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~-------   71 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKD--GFAVAIAD--YNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVE-------   71 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH-------
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-------
Confidence            67999999999999999988876  57787653  5666555444433   4444333 35444445554331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            .+.  .+...+|++|+..
T Consensus        72 ------~~~--~~~g~id~lv~nA   87 (256)
T 1geg_A           72 ------QAR--KTLGGFDVIVNNA   87 (256)
T ss_dssp             ------HHH--HHTTCCCEEEECC
T ss_pred             ------HHH--HHhCCCCEEEECC
Confidence                  111  1234689998863

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=93.94  E-value=0.1  Score=47.93  Aligned_cols=35  Identities=23%  Similarity=0.395  Sum_probs=29.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .+|+|.|.|+||+||+..++-+.+.+ .++|+++.-
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r   57 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETT-DWEVFGMDM   57 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHS-SCEEEEEES
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCC-CCEEEEEeC
Confidence            35789999999999999999887653 489999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=93.94  E-value=0.45  Score=44.56  Aligned_cols=95  Identities=18%  Similarity=0.180  Sum_probs=62.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc-hHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~-~~~l~~~l~~~~~~~~v  153 (353)
                      .-++|.|.| +|.||..++.+.+..  ..+|++...  +-+++ +.++++..+.+.-.++.. .+.+             
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~--Ga~Vi~~~~--~~~~~-~~~~~lGa~~vi~~~~~~~~~~v-------------  249 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKAT--GAEVIVTSS--SREKL-DRAFALGADHGINRLEEDWVERV-------------  249 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHT--TCEEEEEES--CHHHH-HHHHHHTCSEEEETTTSCHHHHH-------------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHc--CCEEEEEec--CchhH-HHHHHcCCCEEEcCCcccHHHHH-------------
Confidence            346899999 899999999999986  468888653  33444 347888888776533221 2222             


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                             .++.....+|+|+++.. -..+.-.+.+++.|-++.
T Consensus       250 -------~~~~~g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv  284 (363)
T 3uog_A          250 -------YALTGDRGADHILEIAG-GAGLGQSLKAVAPDGRIS  284 (363)
T ss_dssp             -------HHHHTTCCEEEEEEETT-SSCHHHHHHHEEEEEEEE
T ss_pred             -------HHHhCCCCceEEEECCC-hHHHHHHHHHhhcCCEEE
Confidence                   33333346999999864 456666666665554433

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=93.93  E-value=0.098  Score=47.40  Aligned_cols=36  Identities=22%  Similarity=0.315  Sum_probs=27.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      ..+|+|.|.|+||.||....+-+.+.  .++|+++.-.
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~   52 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLR   52 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCC
Confidence            34567999999999999999998876  5889988643

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=93.91  E-value=0.16  Score=45.63  Aligned_cols=35  Identities=29%  Similarity=0.362  Sum_probs=28.1

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ..+++|.|.|+||+||...++-+.+.  .++|+++.-
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r   46 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVA   46 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeC
Confidence            34578999999999999999988875  588998864

>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*

Probab=93.89  E-value=0.58  Score=45.08  Aligned_cols=107  Identities=18%  Similarity=0.174  Sum_probs=64.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHh---CCCceEEEEEeecCCHHHHHHHHH--hhCCCE---EEEeCccchHHHHHHhhcCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAE---HEDKFRVVALAAGSNITLLADQVK--RFKPQV---VAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~---~pd~F~VvaLaagsNv~lL~~Q~~--eFkPk~---V~i~de~~~~~l~~~l~~~~  148 (353)
                      .||+|.|. |-||...++.+.+   +|+ |+|+++......+.+....+  .-.+++   +...+..        +.-.+
T Consensus         3 ikVgI~G~-G~iGr~l~r~l~~~~~~~~-~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~--------l~v~g   72 (339)
T 2x5j_O            3 VRVAINGF-GRIGRNVVRALYESGRRAE-ITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQ--------LFVGD   72 (339)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTSGGGT-EEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTE--------EEETT
T ss_pred             eEEEEECc-CHHHHHHHHHHHcCCCCCC-EEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCe--------eEECC
Confidence            58999998 9999999999998   775 99999987666676666553  222221   1111110        00001


Q ss_pred             CCcEEEecHHHHHHH-hcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          149 EKPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~-a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                      ..++++.-. ...++ ....++|+|+.+...+...+-.-..+++|.+
T Consensus        73 ~~i~v~~~~-dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~Gak  118 (339)
T 2x5j_O           73 DAIRVLHER-SLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAK  118 (339)
T ss_dssp             EEEEEECCS-SGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCS
T ss_pred             EEEEEEecC-ChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCC
Confidence            112222111 11111 0111689999998888887777788888865

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=93.89  E-value=0.16  Score=48.81  Aligned_cols=52  Identities=19%  Similarity=0.227  Sum_probs=40.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      .-++|.|.|+||.||..++.+.+..  ..+|++.+  ++-+++. .++++..+.+..
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~--~~~~~~~-~~~~lGa~~~i~  271 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVV--SSAQKEA-AVRALGCDLVIN  271 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHH-HHHHTTCCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEe--CCHHHHH-HHHhcCCCEEEe
Confidence            3468999999999999999999986  56888776  4555554 568888887764

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=93.86  E-value=0.048  Score=50.67  Aligned_cols=51  Identities=14%  Similarity=0.309  Sum_probs=37.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~  130 (353)
                      .-++|.|.|++|.||..+....+..  ..+|+++.-.  -+.+ +.++++..+.++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~--~~~~-~~~~~~g~~~~~  219 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGG--EGKE-ELFRSIGGEVFI  219 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECS--TTHH-HHHHHTTCCEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCC--HHHH-HHHHHcCCceEE
Confidence            3478999999999999999999876  4688886533  2333 456677776554

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=93.85  E-value=0.34  Score=43.06  Aligned_cols=64  Identities=13%  Similarity=-0.025  Sum_probs=43.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..+++..+... ..|-...+.+++.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   71 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAE--GAKVVFGD--ILDEEGKAMAAELADAARYVHLDVTQPAQWKAA   71 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHhhcCceEEEecCCCHHHHHHH
Confidence            367999999999999999988875  57887753  5667777666665443332 2354444444443

>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*

Probab=93.83  E-value=0.49  Score=45.65  Aligned_cols=107  Identities=18%  Similarity=0.238  Sum_probs=65.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHH------hhCCCEEEEeCccchHHHHHHhhcCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaagsNv~lL~~Q~~------eFkPk~V~i~de~~~~~l~~~l~~~~~  149 (353)
                      .||+|.|. |-||+..++.+.++. .+|+|+++.-....+-++.+.+      +|..+ |...+..        +.-.+.
T Consensus         3 ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~-v~~~~~~--------l~v~g~   72 (339)
T 3b1j_A            3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNAD-ISYDENS--------ITVNGK   72 (339)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSC-EEEETTE--------EEETTE
T ss_pred             eEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCc-EEEcCCe--------eeecCc
Confidence            58999999 999999999999883 4699999987667766654432      22222 1111110        000011


Q ss_pred             CcEEEecHHHHHHHh-cCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          150 KPEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a-~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                      .+.++. +....++. ...++|+|+.+.-.+...+-.-..+++|.+
T Consensus        73 ~i~v~~-~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~Gak  117 (339)
T 3b1j_A           73 TMKIVC-DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAK  117 (339)
T ss_dssp             EEEEEC-CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCS
T ss_pred             eEEEEe-cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCc
Confidence            112221 11112221 113789999998888887777788899955

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=93.83  E-value=0.45  Score=42.13  Aligned_cols=64  Identities=11%  Similarity=0.114  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-----CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-----KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF-----kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+..+++     ..+...+ .|-...+.+++.
T Consensus        13 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   82 (267)
T 1iy8_A           13 DRVVLITGGGSGLGRATAVRLAAE--GAKLSLVD--VSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAY   82 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHH
Confidence            468999999999999999988876  57887753  5656655444433     3444433 454444455543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=93.83  E-value=0.37  Score=43.42  Aligned_cols=64  Identities=19%  Similarity=0.203  Sum_probs=47.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..+++..+...+ .|-...+.++..
T Consensus         5 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   69 (281)
T 3zv4_A            5 GEVALITGGASGLGRALVDRFVAE--GARVAVL--DKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRA   69 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEE--eCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH
Confidence            468999999999999999988876  5777765  467888888888877666554 354445555543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=93.81  E-value=0.88  Score=40.77  Aligned_cols=82  Identities=10%  Similarity=0.161  Sum_probs=51.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-eCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF----kPk~V~i-~de~~~~~l~~~l~~~~~~  150 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.++++    ..+...+ .|-...+.++..+.     
T Consensus        27 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~-----   97 (277)
T 4fc7_A           27 DKVAFITGGGSGIGFRIAEIFMRH--GCHTVIA--SRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD-----   97 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTT--TCEEEEE--ESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH-----
Confidence            478999999999999999998876  5777764  45666665555443    4454443 35444444544331     


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                              .+.+  +...+|++|+..
T Consensus        98 --------~~~~--~~g~id~lv~nA  113 (277)
T 4fc7_A           98 --------QALK--EFGRIDILINCA  113 (277)
T ss_dssp             --------HHHH--HHSCCCEEEECC
T ss_pred             --------HHHH--HcCCCCEEEECC
Confidence                    1111  124689998864

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=93.81  E-value=0.21  Score=43.50  Aligned_cols=65  Identities=18%  Similarity=0.196  Sum_probs=41.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. +++.+.+.+.   +++..++..++ .|-...+.+++.
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~-r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   75 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATE--KAKVVVNY-RSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINL   75 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEc-CCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            367999999999999999988876  57777754 4355555443   33334444333 344444444443

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=93.81  E-value=0.28  Score=45.81  Aligned_cols=87  Identities=14%  Similarity=0.124  Sum_probs=56.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ..++|.|.|++|.||..++.+.+..  ..+|++..  +|-+++ +.++++..+.+.-.+....   .             
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~--~~~~~~-~~~~~lGa~~~~~~~~~~~---~-------------  225 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAF--GAEVYATA--GSTGKC-EACERLGAKRGINYRSEDF---A-------------  225 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHHTCSEEEETTTSCH---H-------------
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHhcCCCEEEeCCchHH---H-------------
Confidence            3468999999999999999999986  56788765  344554 4667788887764432211   1             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVA  187 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~  187 (353)
                         +.+.++. ...+|+|+++..+ ..+...+.
T Consensus       226 ---~~~~~~~-~~g~Dvvid~~g~-~~~~~~~~  253 (353)
T 4dup_A          226 ---AVIKAET-GQGVDIILDMIGA-AYFERNIA  253 (353)
T ss_dssp             ---HHHHHHH-SSCEEEEEESCCG-GGHHHHHH
T ss_pred             ---HHHHHHh-CCCceEEEECCCH-HHHHHHHH
Confidence               1223333 3469999998544 33333333

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=93.79  E-value=0.27  Score=42.52  Aligned_cols=64  Identities=13%  Similarity=0.146  Sum_probs=44.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      ||++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..+++..+...+ .|-...+.+++.
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   65 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAE--GKATYLT--GRSESKLSTVTNCLSNNVGYRARDLASHQEVEQL   65 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHT--TCCEEEE--ESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHH
Confidence            578999999999999999988876  4667665  467888888888775544333 344444444443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=93.79  E-value=0.089  Score=47.01  Aligned_cols=31  Identities=19%  Similarity=0.381  Sum_probs=27.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |+|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~   33 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQN--NWHAVGCG   33 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHhC--CCeEEEEc
Confidence            67999999999999999988875  58999886

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=93.74  E-value=0.073  Score=50.57  Aligned_cols=38  Identities=18%  Similarity=0.482  Sum_probs=32.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      .|.||+|.|++|-+|+..++.+.+.|+ ++++|....+.
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~-~eLvg~vd~~~   57 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKD-VELCAVLVRKG   57 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSS-EEEEEEBCCTT
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEecCC
Confidence            456899999999999999999998875 99999977653

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=93.73  E-value=0.17  Score=44.16  Aligned_cols=65  Identities=22%  Similarity=0.168  Sum_probs=42.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++. ++|-+.+.+   ++++..++...+ .|-...+.+++.
T Consensus        21 ~k~vlItGasggiG~~la~~l~~~--G~~v~~~~-r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   89 (274)
T 1ja9_A           21 GKVALTTGAGRGIGRGIAIELGRR--GASVVVNY-GSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVAL   89 (274)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEc-CCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            367999999999999999998876  57787754 435555444   344445555443 354444445443

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=93.73  E-value=0.27  Score=43.07  Aligned_cols=64  Identities=25%  Similarity=0.235  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~-i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..+++   .++... ..|-...+.+++.
T Consensus        14 ~k~vlITGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (266)
T 1xq1_A           14 AKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCA--RNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKL   81 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHH
Confidence            368999999999999999988875  57787764  5666555544433   444333 3454444455443

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=93.73  E-value=0.95  Score=39.93  Aligned_cols=46  Identities=11%  Similarity=0.331  Sum_probs=33.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      .+++|+|+| +|.+|.....-+.+..  ++|.  .+.+|-+.+.+..+++.
T Consensus         2 ~~m~i~iiG-~G~mG~~~a~~l~~~g--~~v~--~~~~~~~~~~~~~~~~g   47 (259)
T 2ahr_A            2 NAMKIGIIG-VGKMASAIIKGLKQTP--HELI--ISGSSLERSKEIAEQLA   47 (259)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHTTSS--CEEE--EECSSHHHHHHHHHHHT
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhCC--CeEE--EECCCHHHHHHHHHHcC
Confidence            346899999 7999999988887764  5553  34567777766666654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=93.72  E-value=0.41  Score=42.65  Aligned_cols=65  Identities=20%  Similarity=0.201  Sum_probs=44.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv---~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.. ++.   +.+.+++++..++...+ .|-...+.+++.
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   86 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYA-NSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKL   86 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEES-SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcC-CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            478999999999999999988875  678876543 343   44555566666666554 354445555543

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=93.71  E-value=0.054  Score=50.37  Aligned_cols=36  Identities=17%  Similarity=0.265  Sum_probs=30.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      +.||+|.|+||.+|+..++.+.+.|+ ++|+|+.-..
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~-~elva~~d~~   40 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEG-VQLGAALERE   40 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTT-EECCCEECCT
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEecC
Confidence            46899999999999999998888765 9999876543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=93.69  E-value=0.45  Score=41.39  Aligned_cols=45  Identities=18%  Similarity=0.118  Sum_probs=34.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+++.  +|.+.+.+..+++
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   51 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGE--GATVAACD--LDRAAAQETVRLL   51 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHHH
Confidence            367999999999999999988875  57887764  5667666655544

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=93.68  E-value=0.16  Score=45.73  Aligned_cols=33  Identities=30%  Similarity=0.387  Sum_probs=28.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +|+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r   37 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAH--GYDVVIADN   37 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEec
Confidence            468999999999999999988876  588888753

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=93.68  E-value=0.14  Score=47.64  Aligned_cols=94  Identities=16%  Similarity=0.191  Sum_probs=60.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -++|.|.|++|.||..++.+.+..  ..+|++...  |-+++ +.++++..+.+.-.+++..+                 
T Consensus       151 g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~--~~~~~-~~~~~lGa~~vi~~~~~~~~-----------------  208 (346)
T 3fbg_A          151 GKTLLIINGAGGVGSIATQIAKAY--GLRVITTAS--RNETI-EWTKKMGADIVLNHKESLLN-----------------  208 (346)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECC--SHHHH-HHHHHHTCSEEECTTSCHHH-----------------
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeC--CHHHH-HHHHhcCCcEEEECCccHHH-----------------
Confidence            468999999999999999999976  468888753  44443 45677888877644332111                 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                         .+.++ ....+|+|+++..+-..+...+.+++.|=++
T Consensus       209 ---~~~~~-~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~i  244 (346)
T 3fbg_A          209 ---QFKTQ-GIELVDYVFCTFNTDMYYDDMIQLVKPRGHI  244 (346)
T ss_dssp             ---HHHHH-TCCCEEEEEESSCHHHHHHHHHHHEEEEEEE
T ss_pred             ---HHHHh-CCCCccEEEECCCchHHHHHHHHHhccCCEE
Confidence               22333 3346899999765544445555555544333

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=93.66  E-value=0.55  Score=41.44  Aligned_cols=82  Identities=11%  Similarity=0.107  Sum_probs=51.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC-----CEEE-EeCccchHHHHHHhhcCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP-----QVVA-VRNESLLDEIKEALANVEE  149 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP-----k~V~-i~de~~~~~l~~~l~~~~~  149 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+++.  +|.+.+.+..++...     +... ..|-...+.+++.+.    
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~----   78 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLK--GAKVALVD--WNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFR----   78 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHH----
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHH----
Confidence            368999999999999999988876  57887754  566666554444422     2322 245444445554331    


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                               .+.+  +...+|+||+..
T Consensus        79 ---------~~~~--~~g~id~lv~~A   94 (267)
T 2gdz_A           79 ---------KVVD--HFGRLDILVNNA   94 (267)
T ss_dssp             ---------HHHH--HHSCCCEEEECC
T ss_pred             ---------HHHH--HcCCCCEEEECC
Confidence                     1222  123689999863

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=93.66  E-value=0.63  Score=41.72  Aligned_cols=82  Identities=20%  Similarity=0.176  Sum_probs=51.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e---FkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+..++   ...+...+ .|-...+.+++.+.      
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~------   91 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGKE--GLRVFVCA--RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA------   91 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH------
Confidence            478999999999999999988875  57887754  555555444433   34454433 35444444444331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.  .+...+|+||+..
T Consensus        92 -------~~~--~~~g~iD~lv~~A  107 (277)
T 2rhc_B           92 -------AVV--ERYGPVDVLVNNA  107 (277)
T ss_dssp             -------HHH--HHTCSCSEEEECC
T ss_pred             -------HHH--HHhCCCCEEEECC
Confidence                   111  1234689998863

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=93.64  E-value=0.098  Score=48.30  Aligned_cols=52  Identities=12%  Similarity=0.213  Sum_probs=41.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      +||.|.|+||+||+..++-+.+... ++|+++.-..+.+.+.+.++.  ++.|+-
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~-~~v~~~d~~~d~~~l~~~~~~--~d~Vih   52 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTD-HHIFEVHRQTKEEELESALLK--ADFIVH   52 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCC-CEEEECCTTCCHHHHHHHHHH--CSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-CEEEEECCCCCHHHHHHHhcc--CCEEEE
Confidence            3699999999999999999887632 488887654788888888774  777764

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=93.64  E-value=0.57  Score=43.66  Aligned_cols=98  Identities=19%  Similarity=0.186  Sum_probs=61.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -.+|.|.|+ |.||..++.+.+..  .. +|++...  +-+++ +.++++..+.++-.++....++.+            
T Consensus       172 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~------------  233 (356)
T 1pl8_A          172 GHKVLVCGA-GPIGMVTLLVAKAM--GAAQVVVTDL--SATRL-SKAKEIGADLVLQISKESPQEIAR------------  233 (356)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEES--CHHHH-HHHHHTTCSEEEECSSCCHHHHHH------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECC--CHHHH-HHHHHhCCCEEEcCcccccchHHH------------
Confidence            357999996 99999999999976  45 7887653  33333 456788888765433100111211            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                          .+.+... ..+|+|+++..+-..+.-.+.+++.|-++.
T Consensus       234 ----~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv  270 (356)
T 1pl8_A          234 ----KVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLV  270 (356)
T ss_dssp             ----HHHHHHT-SCCSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             ----HHHHHhC-CCCCEEEECCCChHHHHHHHHHhcCCCEEE
Confidence                2233333 469999999766555666666666655544

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=93.62  E-value=0.13  Score=47.78  Aligned_cols=92  Identities=12%  Similarity=0.103  Sum_probs=56.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .-++|.|+|+ |.||..++.+.+..  .. +|++...  +-+++ +.++++..+.+.-.+++..   .            
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~~Vi~~~~--~~~~~-~~~~~~Ga~~~~~~~~~~~---~------------  225 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKAS--GAYPVIVSEP--SDFRR-ELAKKVGADYVINPFEEDV---V------------  225 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHT--TCCSEEEECS--CHHHH-HHHHHHTCSEEECTTTSCH---H------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECC--CHHHH-HHHHHhCCCEEECCCCcCH---H------------
Confidence            4468999999 99999999999986  45 6877653  33443 4567788777653222111   1            


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                          +.+.++.....+|+|+++..+...+.-.+.+++.
T Consensus       226 ----~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~  259 (348)
T 2d8a_A          226 ----KEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTP  259 (348)
T ss_dssp             ----HHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEE
T ss_pred             ----HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhc
Confidence                1222232233689999986553444444444433

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=93.62  E-value=0.72  Score=41.83  Aligned_cols=84  Identities=12%  Similarity=0.096  Sum_probs=52.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-+.  ..+.+.+.+++...+...+ .|-...+.+++.+.       
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-------  117 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ-------  117 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHH-------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH-------
Confidence            478999999999999999988876  57777654322  1344555566666666554 35444445554331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            .+.+  +...+|++|+..
T Consensus       118 ------~~~~--~~g~iD~lvnnA  133 (291)
T 3ijr_A          118 ------ETVR--QLGSLNILVNNV  133 (291)
T ss_dssp             ------HHHH--HHSSCCEEEECC
T ss_pred             ------HHHH--HcCCCCEEEECC
Confidence                  1111  224689999863

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=93.61  E-value=0.12  Score=43.71  Aligned_cols=37  Identities=27%  Similarity=0.375  Sum_probs=30.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~  118 (353)
                      ||.|.|+||.||....+-+.+.  .++|++++  ++-+.+.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~--g~~V~~~~--R~~~~~~   38 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRR--GHEVLAVV--RDPQKAA   38 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHH
T ss_pred             EEEEEcCCCHHHHHHHHHHHHC--CCEEEEEE--ecccccc
Confidence            5999999999999999998876  58899885  5555554

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=93.60  E-value=0.33  Score=43.12  Aligned_cols=63  Identities=29%  Similarity=0.336  Sum_probs=46.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|-+.+.+..+++.++...+ .|-...+.++.
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   71 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEG--GAEVLLT--GRNESNIARIREEFGPRVHALRSDIADLNEIAV   71 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhCCcceEEEccCCCHHHHHH
Confidence            367999999999999999988876  5777765  367888888888887666554 34444444443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=93.59  E-value=0.54  Score=41.05  Aligned_cols=85  Identities=24%  Similarity=0.196  Sum_probs=52.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCC
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEK  150 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~  150 (353)
                      ...|++.|.|+||.||..+..-+.+.  .++|+.+...+  ..+.+.+..++..++...+ .|-...+.+++.+.     
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~-----   83 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFD-----   83 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHH-----
Confidence            45689999999999999999888876  68887765222  2344555555666655443 34444445554331     


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                              .+.  .+...+|++|+.
T Consensus        84 --------~~~--~~~g~id~lv~~   98 (256)
T 3ezl_A           84 --------KVK--AEVGEIDVLVNN   98 (256)
T ss_dssp             --------HHH--HHTCCEEEEEEC
T ss_pred             --------HHH--HhcCCCCEEEEC
Confidence                    111  123468888886

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=93.58  E-value=0.29  Score=45.36  Aligned_cols=94  Identities=15%  Similarity=0.100  Sum_probs=58.2

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      ..-++|.|.|++|.||..++.+.+..  ..+|++..  +|-+++ +.++++..+.++-.++..   +.            
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~--~~~~~~-~~~~~~ga~~~~d~~~~~---~~------------  224 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATA--GSEDKL-RRAKALGADETVNYTHPD---WP------------  224 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHHTCSEEEETTSTT---HH------------
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHH-HHHHhcCCCEEEcCCccc---HH------------
Confidence            34468999999999999999999986  46888765  344444 345677777654222111   11            


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                          +.+.++.....+|+|+++.. -..+.-.+.+++.+
T Consensus       225 ----~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~  258 (343)
T 2eih_A          225 ----KEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG  258 (343)
T ss_dssp             ----HHHHHHTTTTCEEEEEESSC-SSSHHHHHHHEEEE
T ss_pred             ----HHHHHHhCCCCceEEEECCC-HHHHHHHHHhhccC
Confidence                11222332336899999865 44555555555443

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=93.57  E-value=0.19  Score=47.35  Aligned_cols=98  Identities=15%  Similarity=0.180  Sum_probs=64.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -.+|.|.|++|.||..++.+.+... ..+|++...  +-+++ +.++++..+.+.-..++    +.+.            
T Consensus       172 g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~--~~~~~-~~~~~lGad~vi~~~~~----~~~~------------  231 (363)
T 4dvj_A          172 APAILIVGGAGGVGSIAVQIARQRT-DLTVIATAS--RPETQ-EWVKSLGAHHVIDHSKP----LAAE------------  231 (363)
T ss_dssp             EEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECS--SHHHH-HHHHHTTCSEEECTTSC----HHHH------------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeC--CHHHH-HHHHHcCCCEEEeCCCC----HHHH------------
Confidence            3689999999999999999998632 457888653  33443 45678888877643322    2221            


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA  198 (353)
                          +.++ ....+|+|+++..+-..+.-.+.+++.|=++.+.
T Consensus       232 ----v~~~-~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~  269 (363)
T 4dvj_A          232 ----VAAL-GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI  269 (363)
T ss_dssp             ----HHTT-CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred             ----HHHh-cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence                1222 2236899999866555666677777777666554

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=93.55  E-value=0.39  Score=43.30  Aligned_cols=64  Identities=19%  Similarity=0.149  Sum_probs=41.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIK  141 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~  141 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-....+.+.+++.+..++...+ .|-...+.++
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   95 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAA   95 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            468999999999999999988875  678887762222344444454445554443 3444444443

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=93.54  E-value=0.18  Score=47.43  Aligned_cols=90  Identities=14%  Similarity=0.099  Sum_probs=56.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ..++|.|.|++|.||..++.+.+..  ..+|++..  ++-+++ +.++++..+.+.-.++...   .+            
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~--~~~~~~-~~~~~~Ga~~~~~~~~~~~---~~------------  222 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTC--SSDEKS-AFLKSLGCDRPINYKTEPV---GT------------  222 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEE--SSHHHH-HHHHHTTCSEEEETTTSCH---HH------------
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEE--CCHHHH-HHHHHcCCcEEEecCChhH---HH------------
Confidence            3468999999999999999999987  46788765  343443 4567788887654332211   11            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIE  190 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~  190 (353)
                          .+.+.. ...+|+|+++..+ ..+...+.+++
T Consensus       223 ----~~~~~~-~~g~D~vid~~g~-~~~~~~~~~l~  252 (362)
T 2c0c_A          223 ----VLKQEY-PEGVDVVYESVGG-AMFDLAVDALA  252 (362)
T ss_dssp             ----HHHHHC-TTCEEEEEECSCT-HHHHHHHHHEE
T ss_pred             ----HHHHhc-CCCCCEEEECCCH-HHHHHHHHHHh
Confidence                122222 2368999998654 33333344333

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=93.51  E-value=0.61  Score=40.18  Aligned_cols=84  Identities=12%  Similarity=0.103  Sum_probs=49.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCc---e--EEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHHhhc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDK---F--RVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALAN  146 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~---F--~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~l~~  146 (353)
                      .|++.|.|+||.||..+..-+.+....   |  +|+.+.  +|-+.+.+..+++   .++...+ .|-...+.+++.+. 
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~-   78 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSS--RTAADLEKISLECRAEGALTDTITADISDMADVRRLTT-   78 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEE--SCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEe--CCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHH-
Confidence            368999999999999999888765321   1  666553  5656555544443   4443333 34444444444321 


Q ss_pred             CCCCcEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          147 VEEKPEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       147 ~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                                  .+.  .....+|+||+..
T Consensus        79 ------------~~~--~~~g~id~li~~A   94 (244)
T 2bd0_A           79 ------------HIV--ERYGHIDCLVNNA   94 (244)
T ss_dssp             ------------HHH--HHTSCCSEEEECC
T ss_pred             ------------HHH--HhCCCCCEEEEcC
Confidence                        111  1234689999863

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=93.50  E-value=0.68  Score=42.07  Aligned_cols=65  Identities=12%  Similarity=0.032  Sum_probs=44.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC---HHHHHHHHHhhCCCEEEEe-CccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN---ITLLADQVKRFKPQVVAVR-NESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN---v~lL~~Q~~eFkPk~V~i~-de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-+++   .+.+.+++++...+..++. |-...+.++.
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  117 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARS  117 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHH
Confidence            478999999999999999988876  577776554423   4556666677766665542 4344444443

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=93.49  E-value=0.48  Score=42.63  Aligned_cols=65  Identities=17%  Similarity=0.165  Sum_probs=43.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH---HHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT---LLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~---lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. .++.+   .+.+++++..++...+ .|-...+.+++.
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   99 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALE--GAAVALTY-VNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQA   99 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe-CCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            468999999999999999988875  67776654 44544   4445555556666554 354545555544

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=93.46  E-value=0.37  Score=42.69  Aligned_cols=66  Identities=11%  Similarity=0.082  Sum_probs=43.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-------------CCHHHHHHHHHhhCCCEEEE-eCccchHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-------------SNITLLADQVKRFKPQVVAV-RNESLLDEIK  141 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-------------sNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~  141 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-.             .+.+.+.+.+++..++...+ .|-...+.++
T Consensus        10 gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A           10 DKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            467999999999999999998876  5778776432             22344444555556666554 3544444454


Q ss_pred             HH
Q 018600          142 EA  143 (353)
Q Consensus       142 ~~  143 (353)
                      +.
T Consensus        88 ~~   89 (287)
T 3pxx_A           88 RE   89 (287)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=93.46  E-value=0.21  Score=45.34  Aligned_cols=34  Identities=24%  Similarity=0.397  Sum_probs=28.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .+|+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r   53 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLER--GDKVVGIDN   53 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEEC
Confidence            3568999999999999999988875  588998853

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=93.46  E-value=0.19  Score=44.31  Aligned_cols=61  Identities=15%  Similarity=0.024  Sum_probs=39.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEEeCccchHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNESLLDEI  140 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i~de~~~~~l  140 (353)
                      ||++.|.|+||.||..+..-+.+.  .++|+.+.-+. ..+.+.+ +++...+...+ |++..+.+
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-d~~~v~~~   62 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEA-FAETYPQLKPM-SEQEPAEL   62 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-CCCSHHHH
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-CHHHHHHH
Confidence            578999999999999999998876  57777654221 2334443 44445555555 55544443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=93.45  E-value=0.36  Score=43.21  Aligned_cols=85  Identities=14%  Similarity=0.055  Sum_probs=51.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCC-CEEE-EeCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKP-QVVA-VRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~---eFkP-k~V~-i~de~~~~~l~~~l~~~~~~  150 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+++.  +|-+.+.+...   +... +... ..|-...+.+++.+.     
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~-----   98 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKM--GAHVVVTA--RSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA-----   98 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH-----
Confidence            367999999999999999988876  57887764  56665554443   3333 3322 234444444444321     


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEeccCc
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGIVGC  179 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~  179 (353)
                              .+.+  ....+|+||+...|.
T Consensus        99 --------~~~~--~~g~iD~li~naag~  117 (286)
T 1xu9_A           99 --------QAGK--LMGGLDMLILNHITN  117 (286)
T ss_dssp             --------HHHH--HHTSCSEEEECCCCC
T ss_pred             --------HHHH--HcCCCCEEEECCccC
Confidence                    1111  123689999764443

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=93.43  E-value=0.26  Score=44.77  Aligned_cols=32  Identities=13%  Similarity=0.341  Sum_probs=27.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r   52 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQ--GHEILVIDN   52 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGG--TCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEEC
Confidence            47999999999999999988875  588988764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=93.43  E-value=0.056  Score=47.93  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=28.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +|+|.|.|+||.||...++-+.+.  .++|+++.-
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   39 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVAS--GEEVTVLDD   39 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECC
T ss_pred             CCeEEEECCCChHHHHHHHHHHHC--CCEEEEEec
Confidence            578999999999999999998876  578998864

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=93.43  E-value=0.43  Score=42.24  Aligned_cols=65  Identities=11%  Similarity=0.105  Sum_probs=42.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~---eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. ++|.+.+.+.++   +..++..++ .|-...+.+++.
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~   94 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAAD--GFNIGVHY-HRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREV   94 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe-CCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            468999999999999999998876  67776544 456655554444   344555443 344444444443

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=93.43  E-value=0.058  Score=50.41  Aligned_cols=55  Identities=18%  Similarity=0.302  Sum_probs=43.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i  131 (353)
                      .-.+|.|.|++|.||..++.+.+..  ..++++.+... +.+...+.++++..+.++-
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~  222 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQKLSDRLKSLGAEHVIT  222 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHHHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchHHHHHHHHhcCCcEEEe
Confidence            3468999999999999999999976  57788876543 5566667888999887753

>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}

Probab=93.43  E-value=0.51  Score=43.17  Aligned_cols=133  Identities=18%  Similarity=0.182  Sum_probs=81.6

Q ss_pred             CCCeeEEEEe-cCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc------hHHHHHHhhc
Q 018600           74 DGPKPISVLG-STGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL------LDEIKEALAN  146 (353)
Q Consensus        74 ~~~k~I~ILG-STGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~------~~~l~~~l~~  146 (353)
                      +.|+||++++ .||+.....|+-+.+....++|+++..++--....+.|++++-.+..+...+.      -.++.+.+..
T Consensus        20 ~~~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~   99 (229)
T 3auf_A           20 GHMIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFDAALAERLQA   99 (229)
T ss_dssp             TTCEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhccHHHHHHHHh
Confidence            4568999996 57888888888877654468999998775333456778888876665443221      1233444443


Q ss_pred             CCCCcEEEecH-----HHHHHHhcCCCCcEEEE----eccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          147 VEEKPEILAGE-----QGVIEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       147 ~~~~~~v~~G~-----~gl~~~a~~~~~D~Vv~----AIvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      .+.+.-|+.|-     +.+.+....    -++|    -+.-+-|..|...|+.+|.+     |-..+++  +=+|++|.+
T Consensus       100 ~~~Dliv~agy~~IL~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  173 (229)
T 3auf_A          100 YGVDLVCLAGYMRLVRGPMLTAFPN----RILNIHPSLLPAFPGLEAQRQALEHGVKVAGCTVHFVTAG--VDEGPIILQ  173 (229)
T ss_dssp             TTCSEEEESSCCSCCCHHHHHHSTT----CEEEEESSCTTSSCSSCHHHHHHHHTCSEEEEEEEECCSS--TTCSCEEEE
T ss_pred             cCCCEEEEcChhHhCCHHHHhhccC----CEEEEccCcCcCCCCcCHHHHHHHcCCCeEEEEEEEECCC--CcCCCEEEE
Confidence            34445555554     334433322    2333    24567899999999999854     3344432  446777744

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=93.42  E-value=0.65  Score=41.76  Aligned_cols=65  Identities=20%  Similarity=0.229  Sum_probs=42.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      ..|.+.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.++++   .++...+ .|-...+.+++.
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   91 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCA--RDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAA   91 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3578999999999999999988876  57777643  5666665555444   4555443 354445555543

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=93.42  E-value=0.19  Score=46.70  Aligned_cols=96  Identities=17%  Similarity=0.191  Sum_probs=62.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      ...+|.|+|+ |.||..++.+.+..  .. +|++..  ++-+++ +.++++..+.+.-.++...   .            
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~--Ga~~Vi~~~--~~~~~~-~~~~~lGa~~vi~~~~~~~---~------------  224 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHL--GAGRIFAVG--SRKHCC-DIALEYGATDIINYKNGDI---V------------  224 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTT--TCSSEEEEC--CCHHHH-HHHHHHTCCEEECGGGSCH---H------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEC--CCHHHH-HHHHHhCCceEEcCCCcCH---H------------
Confidence            3467999995 99999999999876  45 577743  444444 5778899887764322211   1            


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                          +.+.++.....+|+|+++..+-..+...+.+++.|=++
T Consensus       225 ----~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~  262 (352)
T 3fpc_A          225 ----EQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDI  262 (352)
T ss_dssp             ----HHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEE
T ss_pred             ----HHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEE
Confidence                12233333346999999876656666666666655443

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=93.41  E-value=0.53  Score=40.98  Aligned_cols=82  Identities=20%  Similarity=0.133  Sum_probs=51.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..+++   .++...+ .|-...+.++..+.      
T Consensus         9 ~k~vlITGas~giG~~~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------   78 (253)
T 3qiv_A            9 NKVGIVTGSGGGIGQAYAEALARE--GAAVVVA--DINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMAD------   78 (253)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEE--cCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH------
Confidence            467999999999999999988876  5777764  35666665555443   4544443 34444444444331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.+  ....+|++|+..
T Consensus        79 -------~~~~--~~g~id~li~~A   94 (253)
T 3qiv_A           79 -------RTLA--EFGGIDYLVNNA   94 (253)
T ss_dssp             -------HHHH--HHSCCCEEEECC
T ss_pred             -------HHHH--HcCCCCEEEECC
Confidence                   1111  123689998863

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=93.41  E-value=0.45  Score=42.87  Aligned_cols=46  Identities=22%  Similarity=0.210  Sum_probs=35.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..++.+
T Consensus        29 ~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~--~r~~~~~~~~~~~l~   74 (276)
T 2b4q_A           29 GRIALVTGGSRGIGQMIAQGLLEA--GARVFIC--ARDAEACADTATRLS   74 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--CSCHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHH
Confidence            368999999999999999988875  5777765  367777766666553

>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*

Probab=93.41  E-value=0.14  Score=48.07  Aligned_cols=88  Identities=10%  Similarity=0.096  Sum_probs=58.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+|+ |.+|+..+..+.++| .++++++...+.-.       ++.-                       ++.++ 
T Consensus         3 ~irV~IiG~-G~mG~~~~~~l~~~~-~~elvav~d~~~~~-------~~~~-----------------------gv~~~-   49 (320)
T 1f06_A            3 NIRVAIVGY-GNLGRSVEKLIAKQP-DMDLVGIFSRRATL-------DTKT-----------------------PVFDV-   49 (320)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTCS-SEEEEEEEESSSCC-------SSSS-----------------------CEEEG-
T ss_pred             CCEEEEEee-cHHHHHHHHHHhcCC-CCEEEEEEcCCHHH-------hhcC-----------------------CCcee-
Confidence            468999995 999999999999887 59999987643111       1110                       01111 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANK  200 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANK  200 (353)
                        +.+.++.  .++|+|+.+..-..-+.-...++++||.+.....
T Consensus        50 --~d~~~ll--~~~DvViiatp~~~h~~~~~~al~aG~~Vv~ekp   90 (320)
T 1f06_A           50 --ADVDKHA--DDVDVLFLCMGSATDIPEQAPKFAQFACTVDTYD   90 (320)
T ss_dssp             --GGGGGTT--TTCSEEEECSCTTTHHHHHHHHHTTTSEEECCCC
T ss_pred             --CCHHHHh--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEECCC
Confidence              1222333  4688888887666666777888888888776553

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=93.39  E-value=0.47  Score=41.82  Aligned_cols=65  Identities=15%  Similarity=0.133  Sum_probs=40.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC---HHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN---ITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN---v~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.-...   .+.+.+++++...+...+ .|-...+.++..
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   71 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSA   71 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            67999999999999999988875  577777643322   233444444445554443 354444444443

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=93.39  E-value=0.31  Score=44.76  Aligned_cols=98  Identities=13%  Similarity=0.102  Sum_probs=64.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .++|.|.|+ |++|..++.+++..  ..+++..+ .++-++ .+.++++..+.+.-.++....+....+           
T Consensus       161 g~~VlV~Ga-G~vG~~aiq~ak~~--G~~~vi~~-~~~~~k-~~~a~~lGa~~~i~~~~~~~~~~~~~~-----------  224 (346)
T 4a2c_A          161 NKNVIIIGA-GTIGLLAIQCAVAL--GAKSVTAI-DISSEK-LALAKSFGAMQTFNSSEMSAPQMQSVL-----------  224 (346)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHT--TCSEEEEE-ESCHHH-HHHHHHTTCSEEEETTTSCHHHHHHHH-----------
T ss_pred             CCEEEEECC-CCcchHHHHHHHHc--CCcEEEEE-echHHH-HHHHHHcCCeEEEeCCCCCHHHHHHhh-----------
Confidence            467999998 99999999999986  33333322 334444 357899999988876655444433322           


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                              .....+|.|+++..+-..+.-.+.+++.|-++.+
T Consensus       225 --------~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~  258 (346)
T 4a2c_A          225 --------RELRFNQLILETAGVPQTVELAVEIAGPHAQLAL  258 (346)
T ss_dssp             --------GGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEE
T ss_pred             --------cccCCcccccccccccchhhhhhheecCCeEEEE
Confidence                    2334578888886555556666666666655543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=93.38  E-value=0.44  Score=42.39  Aligned_cols=82  Identities=20%  Similarity=0.212  Sum_probs=52.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. .+|-+.+.+   ++++..++...+ .|-...+.+++.+.      
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~------   74 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAEN--GYNIVINY-ARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQ------   74 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH------
Confidence            478999999999999999988875  67887643 456555544   444455665554 35454555554432      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEe
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                             .+.+  +...+|++|+.
T Consensus        75 -------~~~~--~~g~id~lv~n   89 (258)
T 3oid_A           75 -------QIDE--TFGRLDVFVNN   89 (258)
T ss_dssp             -------HHHH--HHSCCCEEEEC
T ss_pred             -------HHHH--HcCCCCEEEEC
Confidence                   1122  22468998886

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=93.38  E-value=0.52  Score=43.75  Aligned_cols=95  Identities=17%  Similarity=0.119  Sum_probs=61.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeC--ccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRN--ESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~d--e~~~~~l~~~l~~~~~~~~v  153 (353)
                      -++|.|.|+ |.||..++.+.+..  ..+|++..  ++-+++ +.++++..+.+.-.+  ++..+++++           
T Consensus       169 g~~VlV~Ga-G~vG~~a~qla~~~--Ga~Vi~~~--~~~~~~-~~~~~lGa~~~~~~~~~~~~~~~i~~-----------  231 (352)
T 1e3j_A          169 GTTVLVIGA-GPIGLVSVLAAKAY--GAFVVCTA--RSPRRL-EVAKNCGADVTLVVDPAKEEESSIIE-----------  231 (352)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEE--SCHHHH-HHHHHTTCSEEEECCTTTSCHHHHHH-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCEEEEEc--CCHHHH-HHHHHhCCCEEEcCcccccHHHHHHH-----------
Confidence            368999997 99999999999986  46676654  343443 456788888765433  232333332           


Q ss_pred             EecHHHHHHHhc---CCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          154 LAGEQGVIEAAR---HPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       154 ~~G~~gl~~~a~---~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                               ...   ...+|+|+++..+-..+...+.+++.|-++.
T Consensus       232 ---------~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv  268 (352)
T 1e3j_A          232 ---------RIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLM  268 (352)
T ss_dssp             ---------HHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             ---------HhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEE
Confidence                     221   2369999999766555666666666655443

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=93.36  E-value=0.81  Score=40.32  Aligned_cols=64  Identities=22%  Similarity=0.134  Sum_probs=41.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+..+++   .++...+ .|-...+.+++.
T Consensus         9 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (260)
T 2ae2_A            9 GCTALVTGGSRGIGYGIVEELASL--GASVYTCS--RNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQEL   76 (260)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            478999999999999999988875  57787654  5666665544443   3443333 354444444443

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=93.34  E-value=0.47  Score=42.04  Aligned_cols=45  Identities=20%  Similarity=0.251  Sum_probs=35.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..++.
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   50 (278)
T 1spx_A            6 EKVAIITGSSNGIGRATAVLFARE--GAKVTITG--RHAERLEETRQQI   50 (278)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            467999999999999999988875  57887764  5677776665554

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=93.32  E-value=0.43  Score=43.19  Aligned_cols=64  Identities=16%  Similarity=0.076  Sum_probs=46.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|-+.+.+.++++.++...+ .|-...+.+++.
T Consensus        29 gk~vlVTGas~gIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   93 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLADE--GCHVLCA--DIDGDAADAAATKIGCGAAACRVDVSDEQQIIAM   93 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHHT--TCEEEEE--ESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHH
Confidence            467999999999999999888876  6778765  467888888888887665544 354444444443

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=93.31  E-value=0.23  Score=43.40  Aligned_cols=58  Identities=17%  Similarity=0.187  Sum_probs=42.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEee----cCCHHHHHHHHHhhCCCEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAA----GSNITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaa----gsNv~lL~~Q~~eFkPk~V~i~  132 (353)
                      .+|+|.|.|+||.||...++-+.+..  ...+...+..    -.+.+.+.+..+.++++.|+-.
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~   68 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHL   68 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHSCCSEEEEC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhcCCCEEEEC
Confidence            46789999999999999999988753  2233333321    2467778888888889988743

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=93.31  E-value=0.23  Score=43.61  Aligned_cols=65  Identities=12%  Similarity=0.199  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      +|++.|.|+||.||..+.+-+.+.  .++|+.+. +++-+.   +.+..+++.++...+ .|-...+.+++.
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   75 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAK--GYSVTVTY-HSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKI   75 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEc-CCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            578999999999999999888876  67787654 445443   334444444454443 354445555543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=93.30  E-value=0.45  Score=41.72  Aligned_cols=65  Identities=22%  Similarity=0.234  Sum_probs=42.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. +++.+.   +.+++++..++...+ .|-...+.++..
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   72 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEE--GYNVAVNY-AGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAM   72 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe-CCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            378999999999999999888876  57776644 445444   444455555665544 344444455443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=93.30  E-value=0.45  Score=42.26  Aligned_cols=66  Identities=17%  Similarity=0.186  Sum_probs=42.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~---~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      ..|.+.|.|+||.||..+..-+.+.  .++|+.+. .+|-+.+.   +++++..++...+ .|-...+.+++.
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   94 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNY-AANREAADAVVAAITESGGEAVAIPGDVGNAADIAAM   94 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc-CCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            3578999999999999999988876  57776543 45555444   4444445555444 344444455443

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=93.28  E-value=0.23  Score=45.65  Aligned_cols=32  Identities=19%  Similarity=0.306  Sum_probs=27.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   56 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEK--GYEVHGIVR   56 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             cEEEEECCCchHHHHHHHHHHHC--CCEEEEEEC
Confidence            78999999999999999988875  578888764

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=93.26  E-value=0.52  Score=44.91  Aligned_cols=96  Identities=14%  Similarity=0.122  Sum_probs=60.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -.+|.|+|+ |.||..++.+.+..  .. +|++..  ++-+++ +.++++..+.+.-.++...   .             
T Consensus       214 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~--~~~~~~-~~~~~lGa~~vi~~~~~~~---~-------------  271 (404)
T 3ip1_A          214 GDNVVILGG-GPIGLAAVAILKHA--GASKVILSE--PSEVRR-NLAKELGADHVIDPTKENF---V-------------  271 (404)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEC--SCHHHH-HHHHHHTCSEEECTTTSCH---H-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEC--CCHHHH-HHHHHcCCCEEEcCCCCCH---H-------------
Confidence            358999998 99999999999986  56 777754  333443 5678899887764332211   1             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCcc-CcHHHHHHH----HcCCcEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCA-GLKPTVAAI----EAGKDIA  196 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~a-GL~pT~~Ai----~~gK~Ia  196 (353)
                         +.+.++.....+|+|+++..+-. -+...+.++    +.|-++.
T Consensus       272 ---~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv  315 (404)
T 3ip1_A          272 ---EAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVA  315 (404)
T ss_dssp             ---HHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEE
T ss_pred             ---HHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEE
Confidence               12233333346999999876652 344455566    5554433

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=93.26  E-value=0.087  Score=51.00  Aligned_cols=37  Identities=22%  Similarity=0.384  Sum_probs=31.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSN  113 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaagsN  113 (353)
                      .||+|+|+||.+|...++++.+|+ ..++++.++..++
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~   39 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARS   39 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECccc
Confidence            379999999999999999999984 3578999886554

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=93.25  E-value=0.57  Score=41.30  Aligned_cols=62  Identities=13%  Similarity=-0.031  Sum_probs=40.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-  |-+. .+..++.+ +.+...|-...+.+++.
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r--~~~~-~~~~~~~~-~~~~~~D~~~~~~~~~~   67 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFARE--GALVALCDL--RPEG-KEVAEAIG-GAFFQVDLEDERERVRF   67 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEES--STTH-HHHHHHHT-CEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeC--ChhH-HHHHHHhh-CCEEEeeCCCHHHHHHH
Confidence            368999999999999999988876  578877653  3333 33344443 24444555555555544

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=93.23  E-value=0.15  Score=46.19  Aligned_cols=34  Identities=24%  Similarity=0.413  Sum_probs=27.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCC---ceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHED---KFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd---~F~VvaLaa  110 (353)
                      |+|.|.|+||+||...++-+.+..+   .++|+++.-
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r   38 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR   38 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence            6799999999999999988776421   189999864

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=93.23  E-value=0.42  Score=44.17  Aligned_cols=82  Identities=13%  Similarity=0.142  Sum_probs=51.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CC--CEEEE-eCccchHHHHHHhhcCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KP--QVVAV-RNESLLDEIKEALANVEE  149 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kP--k~V~i-~de~~~~~l~~~l~~~~~  149 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+++.  +|-+.+.+..+++   .+  +..++ .|-...+.+++.+.    
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~----   79 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIAD--IRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAAD----   79 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHH----
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHH----
Confidence            468999999999999999988875  57877653  5566655554443   22  33333 45454555554332    


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                               .+.  .....+|+||+..
T Consensus        80 ---------~~~--~~~g~id~lv~nA   95 (319)
T 3ioy_A           80 ---------EVE--ARFGPVSILCNNA   95 (319)
T ss_dssp             ---------HHH--HHTCCEEEEEECC
T ss_pred             ---------HHH--HhCCCCCEEEECC
Confidence                     111  1234688888863

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=93.20  E-value=0.22  Score=45.38  Aligned_cols=33  Identities=21%  Similarity=0.328  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   33 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKR   33 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEEC
Confidence            478999999999999999988775  578888753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=93.19  E-value=0.34  Score=43.41  Aligned_cols=81  Identities=15%  Similarity=0.124  Sum_probs=51.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.+++.+..+ ...|-...+.+++.+.          
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~----------   91 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEH--GHRVIISY--RTEHASVTELRQAGAVA-LYGDFSCETGIMAFID----------   91 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEE--SSCCHHHHHHHHHTCEE-EECCTTSHHHHHHHHH----------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHhcCCeE-EECCCCCHHHHHHHHH----------
Confidence            368999999999999999988876  56777654  34445566666666433 3345554555554331          


Q ss_pred             cHHHHHHHhcCCCCcEEEEec
Q 018600          156 GEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                         .+.  .+...+|++|+..
T Consensus        92 ---~~~--~~~g~iD~lv~nA  107 (260)
T 3gem_A           92 ---LLK--TQTSSLRAVVHNA  107 (260)
T ss_dssp             ---HHH--HHCSCCSEEEECC
T ss_pred             ---HHH--HhcCCCCEEEECC
Confidence               111  1234689999863

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=93.15  E-value=0.42  Score=42.04  Aligned_cols=63  Identities=17%  Similarity=0.085  Sum_probs=41.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~---~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..   ++..++...+ .|-...+.++.
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   80 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQD--GAHVVVSS--RKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRER   80 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            478999999999999999988876  57887764  4555554433   3334444433 34444444444

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=93.15  E-value=0.11  Score=46.31  Aligned_cols=54  Identities=30%  Similarity=0.332  Sum_probs=37.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--------------CCHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--------------SNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--------------sNv~lL~~Q~~eFkPk~V~i  131 (353)
                      +|.|.|+||.||....+-+.+.+..++|+++.-+              .+.+.+.+..++++++.|+-
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   68 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFH   68 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEE
Confidence            5899999999999999888764234778887532              23455555555567777664

>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*

Probab=93.14  E-value=0.96  Score=41.13  Aligned_cols=129  Identities=19%  Similarity=0.184  Sum_probs=72.8

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc-------hHHHHHHh
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-------LDEIKEAL  144 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~-------~~~l~~~l  144 (353)
                      +.++||+||.|-.  |++.-+++....  -.++|+++..++. ....+.|+++.-.+..+. ...       -.++.+.+
T Consensus        10 ~~~~ri~vl~SG~--gsnl~all~~~~~~~~~eI~~Vis~~~-a~~~~~A~~~gIp~~~~~-~~~~~~r~~~d~~~~~~l   85 (215)
T 3da8_A           10 SAPARLVVLASGT--GSLLRSLLDAAVGDYPARVVAVGVDRE-CRAAEIAAEASVPVFTVR-LADHPSRDAWDVAITAAT   85 (215)
T ss_dssp             CSSEEEEEEESSC--CHHHHHHHHHSSTTCSEEEEEEEESSC-CHHHHHHHHTTCCEEECC-GGGSSSHHHHHHHHHHHH
T ss_pred             CCCcEEEEEEeCC--hHHHHHHHHHHhccCCCeEEEEEeCCc-hHHHHHHHHcCCCEEEeC-cccccchhhhhHHHHHHH
Confidence            5578999997643  555555555442  2479999998887 445677888887666652 111       12233333


Q ss_pred             hcCCCCcEEEecH-----HHHHHHhcCCCCcEEEEe----ccCccCcHHHHHHHHcCCc-----Eeeecccceeecccch
Q 018600          145 ANVEEKPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFV  210 (353)
Q Consensus       145 ~~~~~~~~v~~G~-----~gl~~~a~~~~~D~Vv~A----IvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li  210 (353)
                      ...+.+.-|+.|-     +.+.+....    -++|-    +.-+-|..|...|+.+|-+     +-..+.+  +=+|++|
T Consensus        86 ~~~~~Dlivlagy~~iL~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--lD~G~Ii  159 (215)
T 3da8_A           86 AAHEPDLVVSAGFMRILGPQFLSRFYG----RTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAG--TDTGPIL  159 (215)
T ss_dssp             HTTCCSEEEEEECCSCCCHHHHHHHTT----TEEEEESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCSS--SSCSCEE
T ss_pred             HhhCCCEEEEcCchhhCCHHHHhhccC----CeEEeCcccccCCCCchHHHHHHHcCCCeEEEEEEEEcCC--CCCCCEE
Confidence            3333333344432     233333221    12221    2456799999999999853     3344432  4567777


Q ss_pred             hH
Q 018600          211 LP  212 (353)
Q Consensus       211 ~~  212 (353)
                      .+
T Consensus       160 ~Q  161 (215)
T 3da8_A          160 AQ  161 (215)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=93.14  E-value=0.47  Score=43.29  Aligned_cols=64  Identities=22%  Similarity=0.205  Sum_probs=43.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..+++   .++...+ .|-...+.+++.
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   98 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARR--GARLVLS--DVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRL   98 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            367999999999999999998876  5777764  35667766665554   3444333 454444455443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=93.13  E-value=0.12  Score=48.27  Aligned_cols=90  Identities=16%  Similarity=0.156  Sum_probs=56.1

Q ss_pred             eeEEEEecCChHhHHH-HHHH-HhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           77 KPISVLGSTGSIGTQT-LDIV-AEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        77 k~I~ILGSTGSIGtqT-LdVI-~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .+|.|+|+ |.||..+ +.+. +..  ..+ |+++....+.+.=.+.++++..+.+ -.+++..                
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~~~----------------  233 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQTPV----------------  233 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTSCG----------------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCccCH----------------
Confidence            67999999 9999999 9998 765  455 8887755430001234567888776 3222111                


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                         .+ +.++ .. .+|+|+++..+...+.-.+.+++.|
T Consensus       234 ---~~-i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~  266 (357)
T 2b5w_A          234 ---ED-VPDV-YE-QMDFIYEATGFPKHAIQSVQALAPN  266 (357)
T ss_dssp             ---GG-HHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEE
T ss_pred             ---HH-HHHh-CC-CCCEEEECCCChHHHHHHHHHHhcC
Confidence               12 3444 33 7999999976544555555555443

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=93.11  E-value=0.08  Score=51.96  Aligned_cols=37  Identities=16%  Similarity=0.328  Sum_probs=31.6

Q ss_pred             CCeeEEEEecCChHhHHHHH-HHHhCCC-ceEEEEEeec
Q 018600           75 GPKPISVLGSTGSIGTQTLD-IVAEHED-KFRVVALAAG  111 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLd-VI~~~pd-~F~VvaLaag  111 (353)
                      ++.||+|+|+||.+|...++ ++.+||- ..+++.++..
T Consensus         3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~   41 (377)
T 3uw3_A            3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS   41 (377)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech
Confidence            45689999999999999999 9999984 5788888754

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=93.11  E-value=0.44  Score=42.59  Aligned_cols=66  Identities=11%  Similarity=0.041  Sum_probs=43.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-----------cCCHHHHHH---HHHhhCCCEEEE-eCccchHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-----------GSNITLLAD---QVKRFKPQVVAV-RNESLLDEI  140 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-----------gsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l  140 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.-           .+|.+.+.+   ++++..++...+ .|-...+.+
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            467999999999999999988876  678887642           125555544   444455555544 354444445


Q ss_pred             HHH
Q 018600          141 KEA  143 (353)
Q Consensus       141 ~~~  143 (353)
                      ++.
T Consensus        93 ~~~   95 (280)
T 3pgx_A           93 REL   95 (280)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=93.10  E-value=0.78  Score=40.31  Aligned_cols=64  Identities=17%  Similarity=0.153  Sum_probs=42.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+.  +|.+.+.+..+++   ..+...+ .|-...+.+++.
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~   74 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAE--GAAVAIAA--RRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAA   74 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            478999999999999999988876  57777653  5666665544443   4444433 354444455443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=93.09  E-value=0.26  Score=45.47  Aligned_cols=32  Identities=22%  Similarity=0.279  Sum_probs=27.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r   60 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIR   60 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHC--CCEEEEEec
Confidence            78999999999999999988875  578888753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=93.09  E-value=0.2  Score=48.82  Aligned_cols=38  Identities=16%  Similarity=0.246  Sum_probs=32.0

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      ..+|+|.|.|+||+||...++-+.  ...++|++++=+.+
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~--~~g~~V~~l~R~~~  185 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQ--GYSHRIYCFIRADN  185 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTB--TTEEEEEEEEESSS
T ss_pred             CCCCeEEEECCccchHHHHHHHHH--hcCCEEEEEECCCC
Confidence            457899999999999999999884  45799999976655

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=93.06  E-value=0.4  Score=44.59  Aligned_cols=99  Identities=16%  Similarity=0.190  Sum_probs=58.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHhhCCCEEEEe-CccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKRFKPQVVAVR-NESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~eFkPk~V~i~-de~~~~~l~~~l~~~~~~~~v  153 (353)
                      -.+|.|.|+ |.||..++.+.+..  ..+ |++...  +-+++ +.++++-+..+... +....+.+.+           
T Consensus       180 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~--~~~~~-~~a~~l~~~~~~~~~~~~~~~~~~~-----------  242 (363)
T 3m6i_A          180 GDPVLICGA-GPIGLITMLCAKAA--GACPLVITDI--DEGRL-KFAKEICPEVVTHKVERLSAEESAK-----------  242 (363)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHT--TCCSEEEEES--CHHHH-HHHHHHCTTCEEEECCSCCHHHHHH-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEECC--CHHHH-HHHHHhchhcccccccccchHHHHH-----------
Confidence            367999998 99999999999986  455 666543  33333 34556622332221 1111222222           


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                           .+.++.....+|+|+++..|-..+...+.+++.|=++.
T Consensus       243 -----~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv  280 (363)
T 3m6i_A          243 -----KIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVF  280 (363)
T ss_dssp             -----HHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEE
T ss_pred             -----HHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEE
Confidence                 22333333469999998766556677777776665544

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=93.05  E-value=0.84  Score=40.21  Aligned_cols=45  Identities=24%  Similarity=0.269  Sum_probs=34.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.++++
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~   56 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARY--GATVILL--GRNEEKLRQVASHI   56 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHH
Confidence            468999999999999999988876  5777764  36666666555443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=93.05  E-value=0.38  Score=42.06  Aligned_cols=65  Identities=18%  Similarity=0.189  Sum_probs=42.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~---eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. ++|-+.+.+..+   +..++...+ .|-...+.+++.
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQ--GANVVVNY-AGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNM   72 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            367999999999999999998875  57777654 446665554443   334554443 354444445443

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=93.02  E-value=0.28  Score=44.65  Aligned_cols=33  Identities=21%  Similarity=0.063  Sum_probs=28.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .|+|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   41 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSL   41 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeC
Confidence            367999999999999999988875  578888763

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=93.01  E-value=0.53  Score=41.71  Aligned_cols=82  Identities=17%  Similarity=0.203  Sum_probs=51.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-sNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-+ ...+.+.+++++..++..++ .|-...+.++..+.        
T Consensus         7 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~--------   76 (252)
T 3h7a_A            7 NATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN--------   76 (252)
T ss_dssp             SCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH--------
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH--------
Confidence            478999999999999999998876  5777765421 12344555555555555444 35454555554331        


Q ss_pred             EecHHHHHHHhcCCCCcEEEEe
Q 018600          154 LAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                           .+.+  . ..+|++|+.
T Consensus        77 -----~~~~--~-g~id~lv~n   90 (252)
T 3h7a_A           77 -----AADA--H-APLEVTIFN   90 (252)
T ss_dssp             -----HHHH--H-SCEEEEEEC
T ss_pred             -----HHHh--h-CCceEEEEC
Confidence                 1121  2 468998886

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=93.00  E-value=0.23  Score=41.63  Aligned_cols=52  Identities=17%  Similarity=0.357  Sum_probs=37.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec--------CCHHHHHHHHHhh-CCCEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--------SNITLLADQVKRF-KPQVVA  130 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--------sNv~lL~~Q~~eF-kPk~V~  130 (353)
                      ++++.|.|+||.||....+-+. .  .++|+++.-+        ++.+.+.+..+++ +++.++
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi   63 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIV   63 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEE
Confidence            3469999999999999999887 4  6888887533        3455666666666 445544

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=93.00  E-value=0.59  Score=40.81  Aligned_cols=36  Identities=8%  Similarity=0.137  Sum_probs=28.4

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCC-ceEEEEEe
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHED-KFRVVALA  109 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd-~F~VvaLa  109 (353)
                      -.+|++.|.|+||.||..+.+-+.+... .++|+++.
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~   55 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTC   55 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEE
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEe
Confidence            3457899999999999999998887631 27888765

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=93.00  E-value=0.91  Score=40.95  Aligned_cols=64  Identities=17%  Similarity=0.130  Sum_probs=41.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF----kPk~V~i-~de~~~~~l~~~  143 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+ ++++.+.+.+..++.    ..+..++ .|-...+.+++.
T Consensus        26 k~~lVTGas~GIG~~ia~~la~~--G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           26 KTAVITGSTSGIGLAIARTLAKA--GANIVLN-GFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHT--TCEEEEE-CCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE-eCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHH
Confidence            68999999999999999988876  5677654 454665555544443    3444443 344444444443

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=92.99  E-value=0.093  Score=51.25  Aligned_cols=37  Identities=24%  Similarity=0.466  Sum_probs=30.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSN  113 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaagsN  113 (353)
                      .||+|+|+||.+|...++++.+++ ..++++.++..++
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~s   40 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS   40 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTT
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcccc
Confidence            489999999999999999999872 2478888876555

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=92.99  E-value=0.68  Score=40.05  Aligned_cols=46  Identities=28%  Similarity=0.326  Sum_probs=34.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      ..|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..+++
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~   58 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAH--GASVVLL--GRTEASLAEVSDQI   58 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--ecCHHHHHHHHHHH
Confidence            3468999999999999999888876  5777665  35666665554443

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=92.98  E-value=0.27  Score=44.97  Aligned_cols=52  Identities=6%  Similarity=0.037  Sum_probs=38.2

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~  130 (353)
                      ...++|.|.|++|.||..+...++..  ..+|++..  +|-+++ +.++++..+.++
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~--~~~~~~-~~~~~~g~~~~~  190 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTV--GTAQKA-QSALKAGAWQVI  190 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEE--SSHHHH-HHHHHHTCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHHcCCCEEE
Confidence            34478999999999999999999976  46788765  344443 445667777655

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=92.97  E-value=0.19  Score=43.68  Aligned_cols=51  Identities=18%  Similarity=0.412  Sum_probs=38.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----------CCHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----------SNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----------sNv~lL~~Q~~eFkPk~V~i  131 (353)
                      +|.|.|+||.||....+-+.+   .++|++++-.           .+.+.+.+..+..+++.|+-
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~---g~~V~~~~r~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   63 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE---RHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIIN   63 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT---TSCEEEEESSSCCTTCEECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCChhHHHHHHHHhc---CCeEEEecCCCcCCCCceeccCCHHHHHHHHHhcCCCEEEE
Confidence            699999999999999998874   3889987633           23455666666667777764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=92.95  E-value=1  Score=39.95  Aligned_cols=82  Identities=15%  Similarity=0.149  Sum_probs=52.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e---FkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..++   ...+..++ .|-...+.+++.+.      
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~------   80 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQ--GADLVLA--ARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVD------   80 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHC--cCEEEEE--eCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH------
Confidence            478999999999999999988876  6777764  3566666555444   34555444 35444555554331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.  .+...+|++|+..
T Consensus        81 -------~~~--~~~g~id~lv~nA   96 (264)
T 3ucx_A           81 -------ETM--KAYGRVDVVINNA   96 (264)
T ss_dssp             -------HHH--HHTSCCSEEEECC
T ss_pred             -------HHH--HHcCCCcEEEECC
Confidence                   111  1234689999864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=92.94  E-value=0.26  Score=44.07  Aligned_cols=32  Identities=19%  Similarity=0.262  Sum_probs=27.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r   35 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEK--GYEVYGADR   35 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECS
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEEEC
Confidence            67999999999999999988875  588988753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=92.91  E-value=0.6  Score=41.47  Aligned_cols=66  Identities=17%  Similarity=0.134  Sum_probs=43.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----------CCHHHHHH---HHHhhCCCEEEE-eCccchHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----------SNITLLAD---QVKRFKPQVVAV-RNESLLDEIK  141 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----------sNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~  141 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-.          ++.+.+.+   .+++..++..++ .|-...+.++
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            367999999999999999988876  6788776533          23444444   444555666554 3444444454


Q ss_pred             HH
Q 018600          142 EA  143 (353)
Q Consensus       142 ~~  143 (353)
                      +.
T Consensus        91 ~~   92 (278)
T 3sx2_A           91 AA   92 (278)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=92.91  E-value=0.085  Score=47.70  Aligned_cols=35  Identities=29%  Similarity=0.357  Sum_probs=29.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||+|.|.|+||.||....+-+.+....++|+++.-
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r   38 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK   38 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence            67899999999999999988877544689998864

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=92.87  E-value=0.62  Score=41.21  Aligned_cols=64  Identities=13%  Similarity=0.124  Sum_probs=41.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-----C-CCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-----K-PQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF-----k-Pk~V~-i~de~~~~~l~~~  143 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..++.     . .+..+ -.|-...+.+++.
T Consensus         7 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   77 (250)
T 3nyw_A            7 KGLAIITGASQGIGAVIAAGLATD--GYRVVLI--ARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTE   77 (250)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHH--TCEEEEE--ESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHH
Confidence            468999999999999999988875  5777765  35666665544433     2 33333 3455555555543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=92.82  E-value=0.77  Score=41.07  Aligned_cols=66  Identities=21%  Similarity=0.159  Sum_probs=45.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--------CHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--------NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--------Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-+.        ..+.+.+.+++...+...+ .|-...+.+++.
T Consensus         6 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            6 GKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            478999999999999999988876  57777654332        2566777777777666554 344444444443

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=92.80  E-value=0.086  Score=50.41  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=29.8

Q ss_pred             eeEEEEecCChHhHHHHHHHH--hCCCceEEEEEeecC
Q 018600           77 KPISVLGSTGSIGTQTLDIVA--EHEDKFRVVALAAGS  112 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~--~~pd~F~VvaLaags  112 (353)
                      .||+|+||||-||+..++.+.  .||+ +++++++..+
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~-~elv~i~s~~   43 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPL-HRLHLLASAE   43 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCC-SCEEEEECTT
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCc-EEEEEEecCC
Confidence            479999999999999999998  6664 8899887544

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=92.71  E-value=0.83  Score=41.20  Aligned_cols=66  Identities=20%  Similarity=0.191  Sum_probs=45.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--------CHHHHHHHHHhhCCCEEEEe-CccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--------NITLLADQVKRFKPQVVAVR-NESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--------Nv~lL~~Q~~eFkPk~V~i~-de~~~~~l~~~  143 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.-..        ..+.+.+.+++..++..++. |-...+.+++.
T Consensus         9 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            9 GKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            478999999999999999988876  57887765332        25566777777777666553 54444555543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=92.64  E-value=0.6  Score=41.52  Aligned_cols=63  Identities=19%  Similarity=0.225  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC----CCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK----PQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk----Pk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+..++++    .+..++ .|-...+.+++
T Consensus        10 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~   77 (262)
T 3pk0_A           10 GRSVVVTGGTKGIGRGIATVFARA--GANVAVA--GRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDA   77 (262)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHH
Confidence            478999999999999999988876  5777765  366776666555442    344433 34444444444

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=92.59  E-value=0.33  Score=40.59  Aligned_cols=58  Identities=17%  Similarity=0.184  Sum_probs=37.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIK  141 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~  141 (353)
                      |++.|.|+||.||....+-+.+.    +|+++  .+|-+.+.+...+.+- .+...|-...+.++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~----~V~~~--~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~   58 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH----DLLLS--GRRAGALAELAREVGA-RALPADLADELEAK   58 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS----EEEEE--CSCHHHHHHHHHHHTC-EECCCCTTSHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC----CEEEE--ECCHHHHHHHHHhccC-cEEEeeCCCHHHHH
Confidence            57999999999999988776654    67765  3567777666655543 33333433333343

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=92.59  E-value=0.92  Score=40.08  Aligned_cols=64  Identities=19%  Similarity=0.119  Sum_probs=41.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..+++   ..+...+ .|-...+.++..
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEE--GTAIALLD--MNREALEKAEASVREKGVEARSYVCDVTSEEAVIGT   74 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            467999999999999999998876  57777653  5656555444433   4444433 354444455443

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=92.54  E-value=0.57  Score=41.89  Aligned_cols=45  Identities=22%  Similarity=0.257  Sum_probs=34.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|-+.+.+.++++
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~l   55 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAA--GASVMIV--GRNPDKLAGAVQEL   55 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHH
Confidence            468999999999999999988876  5777765  36666666555544

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=92.54  E-value=0.76  Score=41.28  Aligned_cols=63  Identities=13%  Similarity=0.151  Sum_probs=45.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.++++.++..++ .|-...+.+++
T Consensus        16 gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~   79 (291)
T 3rd5_A           16 QRTVVITGANSGLGAVTARELARR--GATVIMA--VRDTRKGEAAARTMAGQVEVRELDLQDLSSVRR   79 (291)
T ss_dssp             TCEEEEECCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHH
Confidence            368999999999999999998876  5777764  478888888888776555444 34444444443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=92.54  E-value=0.53  Score=43.84  Aligned_cols=83  Identities=16%  Similarity=0.190  Sum_probs=52.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe---ecCCHHHHH---HHHHhhCCCEEEE-eCccchHHHHHHhhcCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA---AGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEALANVE  148 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa---agsNv~lL~---~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~  148 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|++.+   .++|.+.+.   +.+++..++...+ .|-...+.+++.+.   
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~---   79 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAID---   79 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH---
Confidence            367999999999999999988875  68888864   345555444   4445556665554 34444444444331   


Q ss_pred             CCcEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          149 EKPEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                                .+.  .+...+|+||+.
T Consensus        80 ----------~~~--~~~g~iD~lVnn   94 (324)
T 3u9l_A           80 ----------QII--GEDGRIDVLIHN   94 (324)
T ss_dssp             ----------HHH--HHHSCCSEEEEC
T ss_pred             ----------HHH--HHcCCCCEEEEC
Confidence                      111  122468998886

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=92.54  E-value=0.31  Score=40.76  Aligned_cols=105  Identities=13%  Similarity=0.118  Sum_probs=64.1

Q ss_pred             CCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           75 GPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        75 ~~k~I~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++|+|+|++   |++|...+.-+.++  .|+|..+.-..         .       .+..                 .
T Consensus        21 ~p~~iaVVGas~~~g~~G~~~~~~l~~~--G~~v~~Vnp~~---------~-------~i~G-----------------~   65 (144)
T 2d59_A           21 RYKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPKY---------E-------EVLG-----------------R   65 (144)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTC---------S-------EETT-----------------E
T ss_pred             CCCEEEEEccCCCCCchHHHHHHHHHHC--CCEEEEECCCC---------C-------eECC-----------------e
Confidence            37899999998   89999999988875  57766653211         0       0111                 1


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il  222 (353)
                      .++..   +.++.  .++|+++.++.--+-..-..+++++|.+..+-+. ...  -.-+.+.|+++|.+++
T Consensus        66 ~~y~s---l~~l~--~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~-g~~--~~~l~~~a~~~Gi~vv  128 (144)
T 2d59_A           66 KCYPS---VLDIP--DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY-NTY--NREASKKADEAGLIIV  128 (144)
T ss_dssp             ECBSS---GGGCS--SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT-TCC--CHHHHHHHHHTTCEEE
T ss_pred             eccCC---HHHcC--CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC-Cch--HHHHHHHHHHcCCEEE
Confidence            12211   12222  1588988887775444445578888877554332 211  2345667888898887

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=92.53  E-value=0.21  Score=46.95  Aligned_cols=51  Identities=20%  Similarity=0.373  Sum_probs=38.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~  132 (353)
                      .++|.|.|++|.||..++.+.+..  ..+|++.. +.  ++ .+.++++..+.++-.
T Consensus       184 g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~--~~-~~~~~~lGa~~v~~~  234 (375)
T 2vn8_A          184 GKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQ--DA-SELVRKLGADDVIDY  234 (375)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CG--GG-HHHHHHTTCSEEEET
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-Ch--HH-HHHHHHcCCCEEEEC
Confidence            468999999999999999999986  46888865 32  23 245678888876543

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=92.52  E-value=0.25  Score=45.50  Aligned_cols=51  Identities=16%  Similarity=0.148  Sum_probs=37.9

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH-hhCCCEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK-RFKPQVVA  130 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~-eFkPk~V~  130 (353)
                      ..++|.|.|++|.||..+..+.+..  ..+|++..  +|-+++. .++ ++..+.++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~--~~~~~~~-~~~~~~g~~~~~  206 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSA--GSKEKVD-LLKTKFGFDDAF  206 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHH-HHHHTSCCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHH-HHHHHcCCceEE
Confidence            3478999999999999999999976  46787765  3445553 344 67777654

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=92.51  E-value=0.1  Score=51.13  Aligned_cols=35  Identities=17%  Similarity=0.361  Sum_probs=30.5

Q ss_pred             eEEEEecCChHhHHHHH-HHHhCCC-ceEEEEEeecC
Q 018600           78 PISVLGSTGSIGTQTLD-IVAEHED-KFRVVALAAGS  112 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLd-VI~~~pd-~F~VvaLaags  112 (353)
                      ||+|+|+||.+|...++ ++.+||- ..+++.++..+
T Consensus         2 ~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~   38 (370)
T 3pzr_A            2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ   38 (370)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc
Confidence            69999999999999999 9999984 57888887654

>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*

Probab=92.48  E-value=0.91  Score=44.11  Aligned_cols=112  Identities=17%  Similarity=0.151  Sum_probs=70.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCCHHHHHHHHH------hhCCCEEEEeCccchHHHHHHhhcCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaagsNv~lL~~Q~~------eFkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      .||+|.|. |-||+..++.+.++.  ++|+|||+..-...+-|+-+.+      +|+- -|-..+..        +.-.+
T Consensus         2 ikVaInGf-GrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~-~v~~~~~~--------l~v~g   71 (335)
T 1obf_O            2 IRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPG-TVSVNGSY--------MVVNG   71 (335)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSS-CEEEETTE--------EEETT
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCC-CEEEeCCE--------EEECC
Confidence            47999999 999999999998872  5699999987656666655553      2322 22221111        11011


Q ss_pred             CCcEEEecHHHHHHH-hcCCCCcEEEEeccCccCcHHHHHHHHcC-CcEeeec
Q 018600          149 EKPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALAN  199 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~-a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g-K~IaLAN  199 (353)
                      ..++++.-. ...++ -...++|+|+.+.-++...+-.-.++++| |++.+.|
T Consensus        72 ~~i~v~~~~-dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSa  123 (335)
T 1obf_O           72 DKIRVDANR-NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISA  123 (335)
T ss_dssp             EEEEEECCS-CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESS
T ss_pred             EEEEEEEcC-CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECC
Confidence            122333211 11111 11237999999998899988888999998 4566654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=92.45  E-value=0.65  Score=41.41  Aligned_cols=83  Identities=12%  Similarity=0.155  Sum_probs=52.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----------CCHHHHHHHH---HhhCCCEEEE-eCccchHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----------SNITLLADQV---KRFKPQVVAV-RNESLLDEI  140 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----------sNv~lL~~Q~---~eFkPk~V~i-~de~~~~~l  140 (353)
                      .|.+.|.|+||-||..+..-+.+.  .++|+.+.-.           ++.+.+.+.+   ....++..++ .|-...+.+
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            478999999999999999988876  6778776421           2555555444   4445565554 455555555


Q ss_pred             HHHhhcCCCCcEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          141 KEALANVEEKPEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       141 ~~~l~~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                      ++.+.             .+.+  +...+|++|+.
T Consensus        89 ~~~~~-------------~~~~--~~g~id~lvnn  108 (277)
T 3tsc_A           89 RKVVD-------------DGVA--ALGRLDIIVAN  108 (277)
T ss_dssp             HHHHH-------------HHHH--HHSCCCEEEEC
T ss_pred             HHHHH-------------HHHH--HcCCCCEEEEC
Confidence            54432             1111  22468898886

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=92.44  E-value=0.11  Score=50.48  Aligned_cols=36  Identities=22%  Similarity=0.475  Sum_probs=28.7

Q ss_pred             CeeEEEEecCChHhHHHHH-HHHhCC-CceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLD-IVAEHE-DKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLd-VI~~~p-d~F~VvaLaag  111 (353)
                      |+||+|+||||-||+..++ ++.+++ ...+|..++..
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~   38 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS   38 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence            4689999999999999999 787764 24677776654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=92.43  E-value=0.14  Score=42.35  Aligned_cols=32  Identities=31%  Similarity=0.535  Sum_probs=27.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|+|+||.||....+-+.+.  .++|++++-
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r   35 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVR   35 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEe
Confidence            68999999999999999988875  488988763

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=92.43  E-value=0.65  Score=40.92  Aligned_cols=63  Identities=16%  Similarity=0.153  Sum_probs=44.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|-+.+.+..+++..+...+ .|-...+.+++
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   72 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAER--GAKVIGT--ATSESGAQAISDYLGDNGKGMALNVTNPESIEA   72 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEE--ESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHhcccceEEEEeCCCHHHHHH
Confidence            368999999999999999988876  6777764  467777777777766544332 34444444444

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=92.43  E-value=0.65  Score=41.42  Aligned_cols=66  Identities=9%  Similarity=0.050  Sum_probs=42.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC----------CHH---HHHHHHHhhCCCEEEE-eCccchHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS----------NIT---LLADQVKRFKPQVVAV-RNESLLDEIK  141 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags----------Nv~---lL~~Q~~eFkPk~V~i-~de~~~~~l~  141 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.-..          +.+   .+.+.+++..++..++ .|-...+.++
T Consensus        10 ~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A           10 GKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            468999999999999999988876  57777654321          133   4444455556666554 3444444444


Q ss_pred             HH
Q 018600          142 EA  143 (353)
Q Consensus       142 ~~  143 (353)
                      +.
T Consensus        88 ~~   89 (281)
T 3s55_A           88 SF   89 (281)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=92.40  E-value=0.11  Score=47.73  Aligned_cols=36  Identities=25%  Similarity=0.293  Sum_probs=30.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +|+|.|.|+||+||....+-+.+.+..++|+++.-.
T Consensus        10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~   45 (362)
T 3sxp_A           10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKF   45 (362)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECC
Confidence            568999999999999999999875457999998643

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=92.39  E-value=1.3  Score=39.36  Aligned_cols=64  Identities=17%  Similarity=0.059  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e---FkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+..++   ..++...+ .|-...+.+++.
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   88 (273)
T 1ae1_A           21 GTTALVTGGSKGIGYAIVEELAGL--GARVYTCS--RNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKL   88 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            368999999999999999998876  57777653  566655544443   34444333 454444444443

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=92.38  E-value=0.52  Score=42.55  Aligned_cols=64  Identities=14%  Similarity=0.128  Sum_probs=41.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~---eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+. .+|.+.+.+.++   +..++..++ .|-...+.+++
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   96 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAAS--GFDIAITG-IGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQA   96 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-SCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEe-CCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            367999999999999999988875  67776654 456666555444   445555544 34333333433

>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}

Probab=92.38  E-value=0.76  Score=41.35  Aligned_cols=134  Identities=16%  Similarity=0.215  Sum_probs=80.0

Q ss_pred             CeeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc------hHHHHHHhhcCC
Q 018600           76 PKPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL------LDEIKEALANVE  148 (353)
Q Consensus        76 ~k~I~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~------~~~l~~~l~~~~  148 (353)
                      |+||+++.| ||+.....|+-+.+..-..+|+++..++.-....+.|++++-.+..+...+.      -.++.+.+...+
T Consensus         1 m~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~   80 (216)
T 2ywr_A            1 MLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKKG   80 (216)
T ss_dssp             CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhcC
Confidence            578999965 6888888888877653346999998876444566778888877766543221      123334444334


Q ss_pred             CCcEEEecHHHH--HHHhcCCCCcEEEE----eccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          149 EKPEILAGEQGV--IEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       149 ~~~~v~~G~~gl--~~~a~~~~~D~Vv~----AIvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      .+.-|+.|---+  .++.+..+. -++|    -+.-+-|..|...|+.+|.+     +-..+++  +=+|+++.+
T Consensus        81 ~Dliv~a~y~~il~~~~l~~~~~-~~iNiHpSLLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~--~D~G~Ii~q  152 (216)
T 2ywr_A           81 VELVVLAGFMRILSHNFLKYFPN-KVINIHPSLIPAFQGLHAQKQAVEFGVKFSGCTVHIVDES--VDAGPVIVQ  152 (216)
T ss_dssp             CCEEEESSCCSCCCHHHHTTSTT-CEEEEESSCTTTTCSTTHHHHHHHHTCSEEEEEEEECCSS--SSCSCEEEE
T ss_pred             CCEEEEeCchhhCCHHHHhhccC-CeEEEcCCcCcCCCCccHHHHHHHcCCCeEEEEEEEEccc--CCCCCEEEE
Confidence            444555554211  112232221 2333    24567899999999999864     3344433  456777744

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=92.35  E-value=1.1  Score=39.48  Aligned_cols=83  Identities=16%  Similarity=0.108  Sum_probs=51.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..+++   .++...+ .|-...+.++..+.      
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~------   74 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKA--GATVYITG--RHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFE------   74 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHH------
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHH------
Confidence            468999999999999999988876  57777653  5666655544443   4444333 35444444544321      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.+- ....+|++|+..
T Consensus        75 -------~~~~~-~~g~id~lvnnA   91 (260)
T 2qq5_A           75 -------QVDRE-QQGRLDVLVNNA   91 (260)
T ss_dssp             -------HHHHH-HTTCCCEEEECC
T ss_pred             -------HHHHh-cCCCceEEEECC
Confidence                   11110 134689999874

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=92.32  E-value=0.46  Score=42.82  Aligned_cols=31  Identities=26%  Similarity=0.392  Sum_probs=27.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |+|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~   33 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVID   33 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHT--TCCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence            68999999999999999988875  57899885

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=92.30  E-value=0.69  Score=43.66  Aligned_cols=96  Identities=15%  Similarity=0.219  Sum_probs=60.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCc-eEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDK-FRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~-F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -++|.|.| +|.||..++.+.+..  . .+|+++..  +-+++ +.++++..+.++-.+...-..+.+            
T Consensus       196 g~~VlV~G-aG~vG~~aiqlak~~--Ga~~Vi~~~~--~~~~~-~~~~~lGa~~vi~~~~~~~~~~~~------------  257 (380)
T 1vj0_A          196 GKTVVIQG-AGPLGLFGVVIARSL--GAENVIVIAG--SPNRL-KLAEEIGADLTLNRRETSVEERRK------------  257 (380)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHT--TBSEEEEEES--CHHHH-HHHHHTTCSEEEETTTSCHHHHHH------------
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHc--CCceEEEEcC--CHHHH-HHHHHcCCcEEEeccccCcchHHH------------
Confidence            35899999 899999999999986  4 47888663  33443 456788888765432000111221            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK  193 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK  193 (353)
                          .+.++.....+|+|+++..+-..+.-.+.+++.|=
T Consensus       258 ----~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G  292 (380)
T 1vj0_A          258 ----AIMDITHGRGADFILEATGDSRALLEGSELLRRGG  292 (380)
T ss_dssp             ----HHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEE
T ss_pred             ----HHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCC
Confidence                22233323369999999766556666666655443

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=92.28  E-value=0.76  Score=41.07  Aligned_cols=66  Identities=20%  Similarity=0.187  Sum_probs=43.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee--------------cCCHHHHHHHHH---hhCCCEEEE-eCccch
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA--------------GSNITLLADQVK---RFKPQVVAV-RNESLL  137 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa--------------gsNv~lL~~Q~~---eFkPk~V~i-~de~~~  137 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.-              .++.+.+.+.++   ...++...+ .|-...
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            478999999999999999988876  678877642              234566555444   445555544 354444


Q ss_pred             HHHHHH
Q 018600          138 DEIKEA  143 (353)
Q Consensus       138 ~~l~~~  143 (353)
                      +.+++.
T Consensus        89 ~~v~~~   94 (286)
T 3uve_A           89 DALKAA   94 (286)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            455443

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=92.21  E-value=0.066  Score=47.06  Aligned_cols=34  Identities=21%  Similarity=0.379  Sum_probs=28.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||.||...++-+.+.+..++|++++-
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r   34 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR   34 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence            5799999999999999998877533588999873

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=92.21  E-value=0.31  Score=46.03  Aligned_cols=38  Identities=16%  Similarity=0.246  Sum_probs=31.6

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      ..+|+|.|.|+||+||...+.-+.+  ..++|+++.-+.+
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~--~g~~V~~~~R~~~  104 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQG--YSHRIYCFIRADN  104 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTT--TEEEEEEEEECSS
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHc--CCCEEEEEECCCC
Confidence            4468999999999999999998854  4799999976655

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=92.16  E-value=0.27  Score=45.62  Aligned_cols=95  Identities=9%  Similarity=0.095  Sum_probs=58.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc-hHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~-~~~l~~~l~~~~~~~~v~  154 (353)
                      .++|.|.|++|.||..++++.+..  ..+|++....  -+++ +.++++..+.+.-.+... .+.+++            
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~--~~~~-~~~~~~Ga~~~~~~~~~~~~~~v~~------------  227 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRR--DEQI-ALLKDIGAAHVLNEKAPDFEATLRE------------  227 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESC--GGGH-HHHHHHTCSEEEETTSTTHHHHHHH------------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCC--HHHH-HHHHHcCCCEEEECCcHHHHHHHHH------------
Confidence            368999999999999999999986  4688887632  2232 345678888776543322 222322            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                              +.....+|+|+++..+- .+...+.+++.|=++.
T Consensus       228 --------~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv  260 (349)
T 3pi7_A          228 --------VMKAEQPRIFLDAVTGP-LASAIFNAMPKRARWI  260 (349)
T ss_dssp             --------HHHHHCCCEEEESSCHH-HHHHHHHHSCTTCEEE
T ss_pred             --------HhcCCCCcEEEECCCCh-hHHHHHhhhcCCCEEE
Confidence                    22223589999975442 2344445554444433

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=92.15  E-value=0.68  Score=39.46  Aligned_cols=34  Identities=21%  Similarity=0.378  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|++.|.|+||.||..+.+-+.+....++|+++.
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~   36 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATA   36 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEe
Confidence            4689999999999999999988763227888765

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=92.14  E-value=0.4  Score=43.38  Aligned_cols=82  Identities=13%  Similarity=0.132  Sum_probs=51.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCC--EEEEeCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQ--VVAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk--~V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      .|.+.|.|+||.||..+.+-+.+.  .++|+.+.  +|-+.+.+.++++   ..+  .+...|-...+.+++.+.     
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-----  103 (281)
T 4dry_A           33 GRIALVTGGGTGVGRGIAQALSAE--GYSVVITG--RRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA-----  103 (281)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHH-----
Confidence            468999999999999999988875  57777653  5666665555444   222  233345555555554432     


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                              .+.+  +...+|++|+..
T Consensus       104 --------~~~~--~~g~iD~lvnnA  119 (281)
T 4dry_A          104 --------AVRA--EFARLDLLVNNA  119 (281)
T ss_dssp             --------HHHH--HHSCCSEEEECC
T ss_pred             --------HHHH--HcCCCCEEEECC
Confidence                    1122  124689999864

>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*

Probab=92.13  E-value=0.3  Score=46.95  Aligned_cols=111  Identities=16%  Similarity=0.152  Sum_probs=66.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH--hhCCCE---EEEeCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK--RFKPQV---VAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~--eFkPk~---V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      +.||+|.| +|-||...++.+.+||+ ++|+++......+.++-+.+  .-.|++   +-..+..        +.-.+..
T Consensus         1 ~ikVgI~G-~G~iG~~l~R~l~~~~~-veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~--------l~v~g~~   70 (330)
T 1gad_O            1 TIKVGING-FGRIGRIVFRAAQKRSD-IEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGH--------LIVNGKK   70 (330)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCSS-EEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTE--------EEETTEE
T ss_pred             CeEEEEEC-cCHHHHHHHHHHHcCCC-eEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCE--------EEECCEE
Confidence            35899999 59999999999999975 99999998878887664433  223333   1111110        0000111


Q ss_pred             cEEEecHHHHHHH-hcCCCCcEEEEeccCccCcHHHHHHHHcCCc-Eee
Q 018600          151 PEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD-IAL  197 (353)
Q Consensus       151 ~~v~~G~~gl~~~-a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~-IaL  197 (353)
                      ++++.-. ...++ -...++|+|+.+.-.+...+-.-..+++|.+ |-|
T Consensus        71 i~v~~~~-dp~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdl  118 (330)
T 1gad_O           71 IRVTAER-DPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVM  118 (330)
T ss_dssp             EEEECCS-SGGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred             EEEEEcC-ChhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEE
Confidence            2222211 11111 0012589999998878777777778888855 444

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=92.12  E-value=0.14  Score=43.67  Aligned_cols=30  Identities=30%  Similarity=0.519  Sum_probs=26.9

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|.|.|+||.||....+-+.+.  .++|++++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~--g~~V~~~~   31 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTT--DYQIYAGA   31 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTS--SCEEEEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHC--CCEEEEEE
Confidence            6999999999999999998875  58999886

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=92.12  E-value=0.71  Score=40.67  Aligned_cols=65  Identities=18%  Similarity=0.102  Sum_probs=40.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC---HHHHHHHHHhh-CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN---ITLLADQVKRF-KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN---v~lL~~Q~~eF-kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. ++.   .+.+.+++.+. ..+...+ .|-...+.+++.
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   73 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQ--GADIVLNG-FGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGL   73 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEC-CSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEe-CCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHH
Confidence            367999999999999999998876  57777654 322   23333333332 4454443 344444444443

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=92.11  E-value=0.41  Score=44.11  Aligned_cols=33  Identities=18%  Similarity=0.283  Sum_probs=27.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .+++|.|.|+||+||....+-+.+.  .++|+++.
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~   42 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKK--NYEVCIVD   42 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEE
Confidence            4568999999999999999988775  58899885

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=92.11  E-value=0.34  Score=44.47  Aligned_cols=51  Identities=20%  Similarity=0.228  Sum_probs=38.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~  130 (353)
                      ..+++.|.|+||.||..+....+..  ..+|++..  ++-+++.. ++++..+.++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~--~~~~~~~~-~~~~g~~~~~  195 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAA--GSDEKIAY-LKQIGFDAAF  195 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHH-HHHTTCSEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEe--CCHHHHHH-HHhcCCcEEE
Confidence            3478999999999999999999976  56888754  35555543 4777776654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=92.05  E-value=0.34  Score=42.65  Aligned_cols=64  Identities=13%  Similarity=0.139  Sum_probs=35.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.++++..+...+ .|-...+.+++.
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   71 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQE--GATVLGLD--LKPPAGEEPAAELGAAVRFRNADVTNEADATAA   71 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SSCC------------CEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe--CChHHHHHHHHHhCCceEEEEccCCCHHHHHHH
Confidence            468999999999999999988876  57777654  34455555555555444443 344444444443

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=92.05  E-value=0.5  Score=42.21  Aligned_cols=64  Identities=22%  Similarity=0.152  Sum_probs=44.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+.++++.++...+ .|-...+.+++.
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   75 (271)
T 3tzq_B           11 NKVAIITGACGGIGLETSRVLARA--GARVVLAD--LPETDLAGAAASVGRGAVHHVVDLTNEVSVRAL   75 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--CTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHH
Confidence            478999999999999999988876  57777653  45566666666666655443 354444444443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=92.05  E-value=0.64  Score=40.60  Aligned_cols=46  Identities=24%  Similarity=0.269  Sum_probs=31.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaagsNv~lL~~Q~~e  123 (353)
                      .|++.|.|+||.||..+..-+.+.  .++ |+.+.-..+-+.+.+....
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~   51 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAI   51 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHh
Confidence            367999999999999999988875  465 5555433333444444433

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=92.05  E-value=0.93  Score=42.84  Aligned_cols=84  Identities=14%  Similarity=0.149  Sum_probs=54.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC--------HHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN--------ITLLADQVKRFKPQVVAV-RNESLLDEIKEALAN  146 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN--------v~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~  146 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.-...        ++.+.+++++...+...+ .|-...+.+++.+. 
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-  121 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE-  121 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH-
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH-
Confidence            367999999999999999888875  577777653322        456677777776666554 35444555554332 


Q ss_pred             CCCCcEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          147 VEEKPEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       147 ~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                                  .+.+  +...+|+||+..
T Consensus       122 ------------~~~~--~~g~iDilVnnA  137 (346)
T 3kvo_A          122 ------------KAIK--KFGGIDILVNNA  137 (346)
T ss_dssp             ------------HHHH--HHSCCCEEEECC
T ss_pred             ------------HHHH--HcCCCCEEEECC
Confidence                        1111  123689998873

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=92.00  E-value=2.9  Score=33.21  Aligned_cols=41  Identities=15%  Similarity=0.105  Sum_probs=30.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      +++|.|+|+ |.+|.+..+.+.+.  .++|+++-  +|-+.+.+..
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~--g~~V~~id--~~~~~~~~~~   46 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAA--GKKVLAVD--KSKEKIELLE   46 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHT--TCCEEEEE--SCHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEE--CCHHHHHHHH
Confidence            568999998 99999999999886  56777654  5655554433

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=91.97  E-value=0.18  Score=46.82  Aligned_cols=85  Identities=12%  Similarity=0.135  Sum_probs=58.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ...+|.|.|+ |.||..++.+.+..  ..+|++......  ++ +.++++..+.+. .+++       .+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~--Ga~Vi~~~~~~~--~~-~~~~~lGa~~v~-~~~~-------~~----------  231 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAM--GAEVSVFARNEH--KK-QDALSMGVKHFY-TDPK-------QC----------  231 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHT--TCEEEEECSSST--TH-HHHHHTTCSEEE-SSGG-------GC----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHC--CCeEEEEeCCHH--HH-HHHHhcCCCeec-CCHH-------HH----------
Confidence            3468999997 99999999999987  468988764432  22 245678888776 3321       00          


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                                .. .+|+|+++..+-..+...+.+++.|=+
T Consensus       232 ----------~~-~~D~vid~~g~~~~~~~~~~~l~~~G~  260 (348)
T 3two_A          232 ----------KE-ELDFIISTIPTHYDLKDYLKLLTYNGD  260 (348)
T ss_dssp             ----------CS-CEEEEEECCCSCCCHHHHHTTEEEEEE
T ss_pred             ----------hc-CCCEEEECCCcHHHHHHHHHHHhcCCE
Confidence                      01 699999998777677766665555433

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=91.96  E-value=0.83  Score=41.21  Aligned_cols=81  Identities=10%  Similarity=0.078  Sum_probs=50.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh---hCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e---FkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+  .+|.+.+.+.+++   ..++..++ .|-...+.++..+.      
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~------   73 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVA--GAKILLG--ARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQ------   73 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEE--ESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH------
Confidence            378999999999999999988875  5777765  3566655554444   45555443 35444444444321      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEe
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                             .+.+  +...+|++|+.
T Consensus        74 -------~~~~--~~g~iD~lVnn   88 (264)
T 3tfo_A           74 -------AAVD--TWGRIDVLVNN   88 (264)
T ss_dssp             -------HHHH--HHSCCCEEEEC
T ss_pred             -------HHHH--HcCCCCEEEEC
Confidence                   1111  22468999886

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=91.94  E-value=0.15  Score=46.75  Aligned_cols=87  Identities=18%  Similarity=0.334  Sum_probs=53.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-sNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      +|.|.|++|.||..++.+.+..  ..+|++.+.. .+.+    .++++..+.+.-.++..    .+.             
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~----~~~~lGa~~~i~~~~~~----~~~-------------  208 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHD----YLRVLGAKEVLAREDVM----AER-------------  208 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHH----HHHHTTCSEEEECC-----------------------
T ss_pred             eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHH----HHHHcCCcEEEecCCcH----HHH-------------
Confidence            7999999999999999999986  4678887654 2333    34668887765322110    000             


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                         +.++ ....+|+|+++..| ..+...+.+++.|
T Consensus       209 ---~~~~-~~~~~d~vid~~g~-~~~~~~~~~l~~~  239 (328)
T 1xa0_A          209 ---IRPL-DKQRWAAAVDPVGG-RTLATVLSRMRYG  239 (328)
T ss_dssp             ------C-CSCCEEEEEECSTT-TTHHHHHHTEEEE
T ss_pred             ---HHHh-cCCcccEEEECCcH-HHHHHHHHhhccC
Confidence               1111 12358999999765 5555554444433

>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*

Probab=91.90  E-value=0.47  Score=45.76  Aligned_cols=108  Identities=20%  Similarity=0.245  Sum_probs=66.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH------hhCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK------RFKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~------eFkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      ||+|.|. |-||+..++++.++  +|+|+++.--...+-++...+      +|. ..|...+....      ..  +..+
T Consensus         2 kVgInG~-G~IGr~vlr~l~~~--~~evvaind~~~~~~~a~ll~~ds~~G~~~-~~v~~~~~~l~------v~--g~~i   69 (331)
T 2g82_O            2 KVGINGF-GRIGRQVFRILHSR--GVEVALINDLTDNKTLAHLLKYDSIYHRFP-GEVAYDDQYLY------VD--GKAI   69 (331)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHH--TCCEEEEECSSCHHHHHHHHHCCTTTCSCS-SCEEECSSEEE------ET--TEEE
T ss_pred             EEEEECc-CHHHHHHHHHHHhC--CCEEEEEecCCCHHHHhHhhhccccCCCCC-ceEEEcCCEEE------EC--CEEE
Confidence            7999998 99999999999887  799999876556777766664      222 22222211110      00  1112


Q ss_pred             EEEecHHHHHHHh-cCCCCcEEEEeccCccCcHHHHHHHHcC-CcEeee
Q 018600          152 EILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAG-KDIALA  198 (353)
Q Consensus       152 ~v~~G~~gl~~~a-~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g-K~IaLA  198 (353)
                      +++. +....++. ...++|+|+.+.-.+...+-.-..+++| |++.+-
T Consensus        70 ~v~~-~~dp~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIs  117 (331)
T 2g82_O           70 RATA-VKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIIT  117 (331)
T ss_dssp             EEEC-CSSGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEES
T ss_pred             EEEe-cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEEC
Confidence            2321 11111111 1226899999988888887777888888 445443

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=91.89  E-value=0.078  Score=48.87  Aligned_cols=35  Identities=14%  Similarity=0.347  Sum_probs=30.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      |.||+|+|+ |.+|+...+.+.+.++  +|++..-.++
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~--eLva~~d~~~   37 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGH--EIVGVIENTP   37 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEECSSC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCC--EEEEEEecCc
Confidence            578999999 9999999999999887  8998766544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=91.87  E-value=0.94  Score=40.01  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=34.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.++++
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~--r~~~~~~~~~~~l   56 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTC--RDVTKGHEAVEKL   56 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            478999999999999999998876  57777654  6666665555444

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=91.87  E-value=0.98  Score=40.50  Aligned_cols=65  Identities=18%  Similarity=0.182  Sum_probs=43.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv---~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.. ++-   +.+.+++++...+...+ .|-...+.+++.
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   95 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASD--GFTVVINYA-GKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRL   95 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEES-SCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcC-CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            378999999999999999888875  677876543 343   44555555666665554 354444445443

>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*

Probab=91.86  E-value=0.29  Score=47.17  Aligned_cols=111  Identities=17%  Similarity=0.188  Sum_probs=67.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH--hhCCCE---EEEeCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK--RFKPQV---VAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~--eFkPk~---V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      |.||+|.|+ |-||...++.+.+|| +|+|+++......+.+....+  .-.+++   |...+..        +.-.+..
T Consensus         1 mikVgI~G~-G~iGr~l~R~l~~~~-~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~--------l~v~g~~   70 (334)
T 3cmc_O            1 AVKVGINGF-GRIGRNVFRAALKNP-DIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNN--------LVVNGKE   70 (334)
T ss_dssp             CEEEEEESC-SHHHHHHHHHHTTCT-TEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTE--------EEETTEE
T ss_pred             CeEEEEECC-CHHHHHHHHHHhCCC-CeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCc--------EEECCEE
Confidence            458999999 999999999999987 499999988767777766663  111211   2211111        0000111


Q ss_pred             cEEEecHHHHHHH-hcCCCCcEEEEeccCccCcHHHHHHHHcCC-cEee
Q 018600          151 PEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGK-DIAL  197 (353)
Q Consensus       151 ~~v~~G~~gl~~~-a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK-~IaL  197 (353)
                      .+++.- ....++ ....++|+|+.+.-.+...+-.-..+++|. ++.+
T Consensus        71 i~v~~~-~dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVI  118 (334)
T 3cmc_O           71 IIVKAE-RDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVII  118 (334)
T ss_dssp             EEEECC-SSGGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred             EEEEec-CChhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEE
Confidence            223211 111111 111268999999888888877778888885 3444

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=91.78  E-value=1.1  Score=41.28  Aligned_cols=32  Identities=22%  Similarity=0.384  Sum_probs=27.1

Q ss_pred             eeEEEEecCChHhHHHHHHHH-hCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVA-EHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~-~~pd~F~VvaLaa  110 (353)
                      ++|.|.|+||.||....+-+. +.  .++|+++.-
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r   35 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDS   35 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEec
Confidence            379999999999999999887 64  588998763

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=91.77  E-value=0.6  Score=41.69  Aligned_cols=45  Identities=20%  Similarity=0.239  Sum_probs=34.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+..++.
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~   50 (280)
T 1xkq_A            6 NKTVIITGSSNGIGRTTAILFAQE--GANVTITG--RSSERLEETRQII   50 (280)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHH
Confidence            367999999999999999988875  57887753  5666665554443

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=91.76  E-value=0.39  Score=44.94  Aligned_cols=90  Identities=14%  Similarity=0.087  Sum_probs=55.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -++|.|+|+ |.||..++.+.+..  .. +|+++..  +-+++ +.++++..+.+.-.++...   .             
T Consensus       191 g~~VlV~Ga-G~vG~~a~qlak~~--Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~~~~~~---~-------------  248 (371)
T 1f8f_A          191 ASSFVTWGA-GAVGLSALLAAKVC--GASIIIAVDI--VESRL-ELAKQLGATHVINSKTQDP---V-------------  248 (371)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHH--TCSEEEEEES--CHHHH-HHHHHHTCSEEEETTTSCH---H-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEECC--CHHHH-HHHHHcCCCEEecCCccCH---H-------------
Confidence            368999995 99999999999876  34 5777653  33443 4567888887764332211   1             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                         +.+.++... .+|+|+++..+-..+.-.+.+++.
T Consensus       249 ---~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~  281 (371)
T 1f8f_A          249 ---AAIKEITDG-GVNFALESTGSPEILKQGVDALGI  281 (371)
T ss_dssp             ---HHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEE
T ss_pred             ---HHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhc
Confidence               122333333 689999986543444444444433

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=91.72  E-value=0.13  Score=52.35  Aligned_cols=106  Identities=16%  Similarity=0.124  Sum_probs=63.6

Q ss_pred             ccCCCCCCeeEEEEecCChHhHHHHHHHHhCCCce--EEEEEeecCCHHHHHHHHHhhCCCEEEEe-CccchHHHHHHhh
Q 018600           69 FRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKF--RVVALAAGSNITLLADQVKRFKPQVVAVR-NESLLDEIKEALA  145 (353)
Q Consensus        69 ~~~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F--~VvaLaagsNv~lL~~Q~~eFkPk~V~i~-de~~~~~l~~~l~  145 (353)
                      +.|.-.-.+||+|+| .|+||+.++..+.+++|-|  +|+-.....-...+.   +..+.+..... |.+.+++      
T Consensus         6 ~~~~~~~~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~---~~~g~~~~~~~Vdadnv~~------   75 (480)
T 2ph5_A            6 NTKKILFKNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVA---QQYGVSFKLQQITPQNYLE------   75 (480)
T ss_dssp             CTTCBCCCSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHH---HHHTCEEEECCCCTTTHHH------
T ss_pred             ccceecCCCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHH---hhcCCceeEEeccchhHHH------
Confidence            345555667899999 9999999999999998754  565443211111111   22232332221 1111111      


Q ss_pred             cCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc-Eeeec
Q 018600          146 NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD-IALAN  199 (353)
Q Consensus       146 ~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~-IaLAN  199 (353)
                                   .+.++.+.  .|+|||+..-...+.=.-+|+++|.. |-+||
T Consensus        76 -------------~l~aLl~~--~DvVIN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           76 -------------VIGSTLEE--NDFLIDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             -------------HTGGGCCT--TCEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             -------------HHHHHhcC--CCEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence                         11223433  38999988888777778888888876 66666

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=91.72  E-value=1.1  Score=39.68  Aligned_cols=46  Identities=17%  Similarity=0.151  Sum_probs=33.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. ++|-+.+.+..++.
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~-r~~~~~~~~~~~~~   56 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQ--GFRVVVHY-RHSEGAAQRLVAEL   56 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE-SSCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe-CCChHHHHHHHHHH
Confidence            367999999999999999988875  57787754 32666555444443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=91.70  E-value=0.9  Score=40.95  Aligned_cols=64  Identities=16%  Similarity=0.203  Sum_probs=44.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC--CEEEE-eCccchHHHHHHh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP--QVVAV-RNESLLDEIKEAL  144 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP--k~V~i-~de~~~~~l~~~l  144 (353)
                      |++.|.|+||-||..+..-+.+.  .++|+.+  .+|.+.+.+..++...  +...+ .|-...+.+++.+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   88 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEA--GWSLVLT--GRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAV   88 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHH
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHH
Confidence            78999999999999999988875  5788765  3577777776666543  33332 4544445555443

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=91.69  E-value=0.62  Score=40.70  Aligned_cols=42  Identities=21%  Similarity=0.166  Sum_probs=33.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV  121 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~  121 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+..
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~   47 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFARE--GAKVIATD--INESKLQELE   47 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHGGGG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHH
Confidence            367999999999999999988876  57787764  5777765544

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=91.69  E-value=0.44  Score=44.01  Aligned_cols=95  Identities=15%  Similarity=0.189  Sum_probs=61.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      ...+|.|.|+ |.||..++.+.+... ..+|++...  +-+++ +.++++..+.+.-.+++..++++             
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g-~~~Vi~~~~--~~~~~-~~~~~lGa~~~i~~~~~~~~~v~-------------  232 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVS-AARVIAVDL--DDDRL-ALAREVGADAAVKSGAGAADAIR-------------  232 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHC-CCEEEEEES--CHHHH-HHHHHTTCSEEEECSTTHHHHHH-------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC-CCEEEEEcC--CHHHH-HHHHHcCCCEEEcCCCcHHHHHH-------------
Confidence            3468999998 999999999998752 357887653  33443 46788998887655443233333             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                             ++.....+|+|++++.+-..+.-.+.+++.|=+
T Consensus       233 -------~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~  265 (345)
T 3jv7_A          233 -------ELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGH  265 (345)
T ss_dssp             -------HHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEE
T ss_pred             -------HHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCE
Confidence                   223333689999987665455555555555433

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=91.61  E-value=0.14  Score=42.90  Aligned_cols=35  Identities=31%  Similarity=0.449  Sum_probs=28.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .|+|.|+|+||.||....+-+.+....++|++++-
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r   39 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR   39 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            36799999999999999999988644238888763

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=91.59  E-value=0.7  Score=41.44  Aligned_cols=65  Identities=17%  Similarity=0.112  Sum_probs=42.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH---HHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL---LADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l---L~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+ .+++.+.   +.+++++...+..++ .|-...+.++..
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~--G~~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~   96 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAA--GAKVAVN-YASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEAL   96 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEE-ESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE-eCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            478999999999999999988876  5777664 4445544   444455555665554 354444445443

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=91.58  E-value=1.1  Score=39.43  Aligned_cols=66  Identities=15%  Similarity=0.113  Sum_probs=43.2

Q ss_pred             CeeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCC-CEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKP-QVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaag-sNv~lL~~Q~~eFkP-k~V~-i~de~~~~~l~~~  143 (353)
                      .|++.|.|+||+  ||..+..-+.+.  .++|+.+.-. ++.+.+.+..+++.. +..+ ..|-...+.+++.
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   77 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETC   77 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHH
Confidence            468999999999  999999988876  6777765432 234666666776654 3333 2344444444443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=91.57  E-value=0.62  Score=42.48  Aligned_cols=44  Identities=23%  Similarity=0.289  Sum_probs=33.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+.  +|-+.+.+..++
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~--r~~~~~~~~~~~   69 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKE--GAQVTITG--RNEDRLEETKQQ   69 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            367999999999999999988876  67887653  566666554443

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=91.56  E-value=0.25  Score=44.76  Aligned_cols=53  Identities=19%  Similarity=0.211  Sum_probs=38.0

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~  130 (353)
                      ...-++|.|.|+||.||..++.+.+..  ..+|++...+  -+++ +.++++..+.+.
T Consensus       123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~--~~~~-~~~~~~ga~~~~  175 (302)
T 1iz0_A          123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASR--PEKL-ALPLALGAEEAA  175 (302)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESS--GGGS-HHHHHTTCSEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCC--HHHH-HHHHhcCCCEEE
Confidence            334468999999999999999999986  4688887642  2222 234667777654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=91.55  E-value=0.18  Score=45.86  Aligned_cols=33  Identities=21%  Similarity=0.328  Sum_probs=28.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +|+|.|.|+||+||...++-+.+.  .++|+++.-
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   59 (343)
T 2b69_A           27 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDN   59 (343)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeC
Confidence            578999999999999999988875  588998863

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=91.53  E-value=1  Score=40.87  Aligned_cols=66  Identities=18%  Similarity=0.206  Sum_probs=44.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----------CCHHHHHHH---HHhhCCCEEEE-eCccchHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----------SNITLLADQ---VKRFKPQVVAV-RNESLLDEIK  141 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----------sNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~  141 (353)
                      .|.+.|.|+||-||..+..-+.+.  .++|+.+.-+          ++.+.+.+.   +++..++...+ .|-...+.++
T Consensus        28 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            478999999999999999988876  6888876533          345555544   44445565544 3544455555


Q ss_pred             HH
Q 018600          142 EA  143 (353)
Q Consensus       142 ~~  143 (353)
                      +.
T Consensus       106 ~~  107 (299)
T 3t7c_A          106 AA  107 (299)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=91.50  E-value=0.95  Score=40.68  Aligned_cols=81  Identities=23%  Similarity=0.242  Sum_probs=51.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.++++   .++...+ .|-...+.+++.+.      
T Consensus        26 gk~~lVTGas~gIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~------   95 (271)
T 4ibo_A           26 GRTALVTGSSRGLGRAMAEGLAVA--GARILIN--GTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFA------   95 (271)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEC--CSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHH------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH------
Confidence            467999999999999999988876  5677653  46776666555544   5555443 34444444444331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEe
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                             .+.  .+...+|++|+.
T Consensus        96 -------~~~--~~~g~iD~lv~n  110 (271)
T 4ibo_A           96 -------RLD--EQGIDVDILVNN  110 (271)
T ss_dssp             -------HHH--HHTCCCCEEEEC
T ss_pred             -------HHH--HHCCCCCEEEEC
Confidence                   111  123468999886

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=91.50  E-value=1.1  Score=40.75  Aligned_cols=80  Identities=11%  Similarity=0.005  Sum_probs=48.5

Q ss_pred             CeeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEE-EeCccchHHHHHHhhcCCC
Q 018600           76 PKPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVA-VRNESLLDEIKEALANVEE  149 (353)
Q Consensus        76 ~k~I~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaagsNv---~lL~~Q~~eFkPk~V~-i~de~~~~~l~~~l~~~~~  149 (353)
                      .|++.|.|+||+  ||..+..-+.+.  .++|+.+.  +|-   +.+.+...++. +..+ ..|-...+.+++.+.    
T Consensus        31 gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~----  101 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAAREA--GAELAFTY--QGDALKKRVEPLAEELG-AFVAGHCDVADAASIDAVFE----  101 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEE--CSHHHHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHH----
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEc--CCHHHHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHH----
Confidence            478999999999  999999988876  57776543  332   33444444443 3333 345555555554332    


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                               .+.  .+...+|++|+.
T Consensus       102 ---------~~~--~~~g~iD~lVnn  116 (293)
T 3grk_A          102 ---------TLE--KKWGKLDFLVHA  116 (293)
T ss_dssp             ---------HHH--HHTSCCSEEEEC
T ss_pred             ---------HHH--HhcCCCCEEEEC
Confidence                     111  123468999986

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=91.48  E-value=1.7  Score=39.31  Aligned_cols=64  Identities=20%  Similarity=0.172  Sum_probs=43.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      .|.+.|.|+||-||..+..-+.+.  .++|+.+.  +|.+.+.+.++++   ..+...+ .|-...+.+++.
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   95 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAAD--GVTVGALG--RTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNA   95 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            367999999999999999988876  57777653  6667766666655   3454443 354444455543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=91.44  E-value=0.19  Score=45.05  Aligned_cols=33  Identities=21%  Similarity=0.421  Sum_probs=27.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||+||...++-+.+.+ .++|+++.-
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r   33 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDI   33 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEES
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhC-CCEEEEEeC
Confidence            479999999999999999888753 488998863

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=91.40  E-value=0.39  Score=44.90  Aligned_cols=33  Identities=21%  Similarity=0.189  Sum_probs=27.7

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEE
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVA  107 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~Vva  107 (353)
                      ++..+||+|.|+||..|+..++-+.++  .|++++
T Consensus         4 ~~~~~~VaVvGasG~~G~~~~~~l~~~--g~~~v~   36 (288)
T 1oi7_A            4 VNRETRVLVQGITGREGQFHTKQMLTY--GTKIVA   36 (288)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHH--TCEEEE
T ss_pred             cCCCCEEEEECCCCCHHHHHHHHHHHc--CCeEEE
Confidence            456689999999999999999988876  588664

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=91.39  E-value=0.81  Score=40.64  Aligned_cols=81  Identities=14%  Similarity=0.063  Sum_probs=50.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh----CC-CEEEE-eCccchHHHHHHhhcCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF----KP-QVVAV-RNESLLDEIKEALANVEE  149 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF----kP-k~V~i-~de~~~~~l~~~l~~~~~  149 (353)
                      .|.+.|.|+||-||..+..-+.+.  .++|+.+  .+|.+.+.+..+++    .. +...+ .|-...+.+++.+.    
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~----   79 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEA--GAAVAFC--ARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAE----   79 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHH----
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHH----
Confidence            468999999999999999988876  5777664  35666666555443    22 23333 45554555554331    


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                               .+.+  ....+|++|+.
T Consensus        80 ---------~~~~--~~g~id~lvnn   94 (265)
T 3lf2_A           80 ---------ACER--TLGCASILVNN   94 (265)
T ss_dssp             ---------HHHH--HHCSCSEEEEC
T ss_pred             ---------HHHH--HcCCCCEEEEC
Confidence                     1111  12468898886

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=91.37  E-value=0.17  Score=44.96  Aligned_cols=32  Identities=31%  Similarity=0.487  Sum_probs=27.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r   32 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDN   32 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeC
Confidence            47999999999999999998875  578988853

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=91.35  E-value=0.58  Score=41.60  Aligned_cols=65  Identities=15%  Similarity=0.191  Sum_probs=42.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL---~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+ ++++-+.+   .+..++..++..++ .|-...+.+++.
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~--G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   97 (271)
T 4iin_A           29 GKNVLITGASKGIGAEIAKTLASM--GLKVWIN-YRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEA   97 (271)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEE-ESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE-eCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            368999999999999999988876  5777664 45555444   34444555555444 344444444443

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=91.34  E-value=0.53  Score=41.95  Aligned_cols=30  Identities=23%  Similarity=0.410  Sum_probs=25.9

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|.|.|+||.||....+-+.+.  .++|+++.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~   31 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLAR--GLEVAVLD   31 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTT--TCEEEEEC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHC--CCEEEEEE
Confidence            6999999999999999888764  57888875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=91.29  E-value=1.5  Score=38.75  Aligned_cols=82  Identities=16%  Similarity=0.103  Sum_probs=48.7

Q ss_pred             eeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           77 KPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        77 k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaagsNv-~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      |++.|.|+|  |.||..+..-+.+.  .++|+.+.-+... +.+.+...+.....+...|-...+.+++.+.        
T Consensus        10 k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~--------   79 (265)
T 1qsg_A           10 KRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFA--------   79 (265)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH--------
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHH--------
Confidence            679999999  99999999988876  5788776432211 3333333333323344455554545544321        


Q ss_pred             EecHHHHHHHh-cCCCCcEEEEec
Q 018600          154 LAGEQGVIEAA-RHPDAVTVVTGI  176 (353)
Q Consensus       154 ~~G~~gl~~~a-~~~~~D~Vv~AI  176 (353)
                              ++. +...+|++|+..
T Consensus        80 --------~~~~~~g~iD~lv~~A   95 (265)
T 1qsg_A           80 --------ELGKVWPKFDGFVHSI   95 (265)
T ss_dssp             --------HHHTTCSSEEEEEECC
T ss_pred             --------HHHHHcCCCCEEEECC
Confidence                    111 234689988864

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=91.29  E-value=0.18  Score=49.67  Aligned_cols=34  Identities=21%  Similarity=0.366  Sum_probs=29.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +++|.|.|+||.||...++-+.+.  .++|++++-.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~  180 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRK  180 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECC
Confidence            678999999999999999998876  6899998743

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=91.28  E-value=0.85  Score=40.39  Aligned_cols=64  Identities=13%  Similarity=0.070  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~---~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+.  +|.+.+.   +++++..++...+ .|-...+.+++.
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   79 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTD--LKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAV   79 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEE--SSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            368999999999999999888875  57776653  4555444   4445556666554 344444444443

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=91.28  E-value=1.4  Score=40.49  Aligned_cols=125  Identities=10%  Similarity=0.111  Sum_probs=70.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+||+|+|+ |.||++.-..+++.  .++|++....       +.++..  +++++.+....+-+++             
T Consensus         6 ~mkI~IIG~-G~~G~sLA~~L~~~--G~~V~~~~~~-------~~~~~a--DilavP~~ai~~vl~~-------------   60 (232)
T 3dfu_A            6 RLRVGIFDD-GSSTVNMAEKLDSV--GHYVTVLHAP-------EDIRDF--ELVVIDAHGVEGYVEK-------------   60 (232)
T ss_dssp             CCEEEEECC-SCCCSCHHHHHHHT--TCEEEECSSG-------GGGGGC--SEEEECSSCHHHHHHH-------------
T ss_pred             CcEEEEEee-CHHHHHHHHHHHHC--CCEEEEecCH-------HHhccC--CEEEEcHHHHHHHHHH-------------
Confidence            357999995 99999988888876  5788876542       123332  3666665432222222             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe----eecccceeeccc-----chhHHhhhcCCeEeecCC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA----LANKETLIAGGP-----FVLPLAHKHNIKILPADS  226 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia----LANKESLV~aG~-----li~~~a~~~~~~IlPVDS  226 (353)
                             +......+.+|.-.+|..+....-.+.+.|....    ++..-..+++++     .+.++++.-|.+++.+|+
T Consensus        61 -------l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~~~~i~a~d~~a~~~l~~L~~~lG~~vv~~~~  133 (232)
T 3dfu_A           61 -------LSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQDRWVASALDELGETIVGLLVGELGGSIVEIAD  133 (232)
T ss_dssp             -------HHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETTEEEEEESSHHHHHHHHHHHHHTTCEECCCCG
T ss_pred             -------HHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCCceeeeCCCHHHHHHHHHHHHHhCCEEEEeCH
Confidence                   2222233334444444444333223334443211    112223334333     467788888999999999


Q ss_pred             chhHHH
Q 018600          227 EHSAIF  232 (353)
Q Consensus       227 EHsAIf  232 (353)
                      |+...|
T Consensus       134 ~~hd~~  139 (232)
T 3dfu_A          134 DKRAQL  139 (232)
T ss_dssp             GGHHHH
T ss_pred             HHHhHH
Confidence            887776

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=91.20  E-value=1.2  Score=39.26  Aligned_cols=82  Identities=17%  Similarity=0.234  Sum_probs=52.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++.|.|+||.||..+.+-+.+.  .++|+.+  .+|.+.+.+..++.   ..+...+ .|-...+.+++.+.      
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~------   75 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKE--GARVVIT--GRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIE------   75 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH------
Confidence            478999999999999999988876  5777764  46666666655554   3444443 35444445554331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.+  +...+|++|+..
T Consensus        76 -------~~~~--~~g~id~lv~nA   91 (257)
T 3imf_A           76 -------QIDE--KFGRIDILINNA   91 (257)
T ss_dssp             -------HHHH--HHSCCCEEEECC
T ss_pred             -------HHHH--HcCCCCEEEECC
Confidence                   1111  224688988863

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=91.14  E-value=0.47  Score=44.58  Aligned_cols=93  Identities=10%  Similarity=0.179  Sum_probs=58.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .-.+|.|+|+ |.||..++.+.+..  .. +|++.....  +++ +.++++..+.+.-..+. ...+.            
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~--Ga~~Vi~~~~~~--~~~-~~a~~lGa~~vi~~~~~-~~~~~------------  253 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTA--GASRIIGIDIDS--KKY-ETAKKFGVNEFVNPKDH-DKPIQ------------  253 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHH--TCSCEEEECSCT--THH-HHHHTTTCCEEECGGGC-SSCHH------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCCH--HHH-HHHHHcCCcEEEccccC-chhHH------------
Confidence            3468999998 99999999999976  45 677764333  333 36788998886543210 00111            


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                          +.+.++... .+|+|+++..+-..+...+.+++.
T Consensus       254 ----~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~  286 (378)
T 3uko_A          254 ----EVIVDLTDG-GVDYSFECIGNVSVMRAALECCHK  286 (378)
T ss_dssp             ----HHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCT
T ss_pred             ----HHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhc
Confidence                122333333 799999986654555555666555

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=91.12  E-value=0.22  Score=44.90  Aligned_cols=32  Identities=19%  Similarity=0.363  Sum_probs=27.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|+|.|.|+||+||+...+-+.+.  .++|+++.
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~   40 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQK--GYAVNTTV   40 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEE
Confidence            478999999999999999988764  68898875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=91.12  E-value=0.23  Score=44.61  Aligned_cols=32  Identities=22%  Similarity=0.360  Sum_probs=27.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ++|.|.|+||+||....+-+.+.  .++|+++.-
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r   45 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAA--GHDLVLIHR   45 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEec
Confidence            47999999999999999988875  588998864

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=91.07  E-value=0.43  Score=44.58  Aligned_cols=34  Identities=29%  Similarity=0.405  Sum_probs=28.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +|+|.|.|+||.||....+-+.+.  .++|++++-+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~   38 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHS   38 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECC
Confidence            468999999999999999988764  5889988743

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=91.05  E-value=0.98  Score=41.54  Aligned_cols=66  Identities=15%  Similarity=0.147  Sum_probs=43.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----------CCHHHHHHH---HHhhCCCEEEE-eCccchHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----------SNITLLADQ---VKRFKPQVVAV-RNESLLDEIK  141 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----------sNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~  141 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.-.          ++.+.+.+.   +++..++..++ .|-...+.++
T Consensus        46 gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            368999999999999999988876  6788877432          345555544   44455565554 3544444554


Q ss_pred             HH
Q 018600          142 EA  143 (353)
Q Consensus       142 ~~  143 (353)
                      +.
T Consensus       124 ~~  125 (317)
T 3oec_A          124 AV  125 (317)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=91.03  E-value=0.2  Score=44.61  Aligned_cols=31  Identities=23%  Similarity=0.373  Sum_probs=26.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |+|.|.|+||+||+..++-+.+.  .++|+++.
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~   32 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTI   32 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHC--CCEEEEEE
Confidence            67999999999999999988764  58898875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=91.03  E-value=0.14  Score=44.82  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=28.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +|.|.|+||.||....+-+.+.+..++|++++-
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r   33 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR   33 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence            589999999999999998887544689999873

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=91.00  E-value=0.56  Score=42.49  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=26.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||.|.|+||.||....+-+.+.+ .++|+++.-
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~-g~~V~~~~r   33 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNT-QDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHC-SCEEEEEEC
T ss_pred             EEEEECCCchHhHHHHHHHHhcC-CCeEEEEec
Confidence            59999999999999999888742 478988863

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=90.97  E-value=1.6  Score=38.58  Aligned_cols=65  Identities=18%  Similarity=0.195  Sum_probs=42.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~---~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+. +++.+.+.   +++++..++..++ .|-...+.+++.
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   76 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQE--GANVVLTY-NGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAA   76 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc-CCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            468999999999999999988876  67777654 44444444   4444445555444 454445555543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=90.94  E-value=1.1  Score=40.48  Aligned_cols=63  Identities=19%  Similarity=0.138  Sum_probs=42.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+  .+|.+.+.+.++++   .++..++ .|-...+.++.
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   74 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFARE--GAKVVVT--ARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEA   74 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEC--CSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            367999999999999999988876  5777653  46777776666655   3454443 24343444443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=90.73  E-value=0.16  Score=44.95  Aligned_cols=31  Identities=19%  Similarity=0.198  Sum_probs=26.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|.|.|+||.||..+++-+.+.+ .++|++++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~-g~~V~~~~   32 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANH-IDHFHIGV   32 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTT-CTTEEEEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCC-CCcEEEEE
Confidence            69999999999999999987643 47788876

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=90.68  E-value=0.59  Score=43.24  Aligned_cols=89  Identities=15%  Similarity=0.155  Sum_probs=55.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .++|.|.|+ |.||..++.+.+..  ..+|+++.  ++-+++ +.++++..+.++-..++.   +.              
T Consensus       165 g~~VlV~Ga-G~vG~~~~~~a~~~--Ga~Vi~~~--~~~~~~-~~~~~lGa~~~~d~~~~~---~~--------------  221 (339)
T 1rjw_A          165 GEWVAIYGI-GGLGHVAVQYAKAM--GLNVVAVD--IGDEKL-ELAKELGADLVVNPLKED---AA--------------  221 (339)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHT--TCEEEEEC--SCHHHH-HHHHHTTCSEEECTTTSC---HH--------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCEEEEEe--CCHHHH-HHHHHCCCCEEecCCCcc---HH--------------
Confidence            468999999 88999999999986  46888765  344444 356778877654221111   11              


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                        +.+.++.  ..+|+|+++..+...+.-.+.+++.
T Consensus       222 --~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~  253 (339)
T 1rjw_A          222 --KFMKEKV--GGVHAAVVTAVSKPAFQSAYNSIRR  253 (339)
T ss_dssp             --HHHHHHH--SSEEEEEESSCCHHHHHHHHHHEEE
T ss_pred             --HHHHHHh--CCCCEEEECCCCHHHHHHHHHHhhc
Confidence              1223333  3699999986543444444444443

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=90.65  E-value=0.55  Score=44.52  Aligned_cols=46  Identities=13%  Similarity=0.047  Sum_probs=34.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQ  127 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk  127 (353)
                      -.+|.|+|+ |.||..++.+.+..  .. +|++..  +|-+++ +.++++..+
T Consensus       186 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~--~~~~~~-~~a~~lGa~  232 (398)
T 2dph_A          186 GSHVYIAGA-GPVGRCAAAGARLL--GAACVIVGD--QNPERL-KLLSDAGFE  232 (398)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEEE--SCHHHH-HHHHTTTCE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEc--CCHHHH-HHHHHcCCc
Confidence            368999997 99999999999876  45 787765  344444 567788875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=90.64  E-value=1.1  Score=39.18  Aligned_cols=83  Identities=14%  Similarity=0.116  Sum_probs=50.7

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCC---HHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCC
Q 018600           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSN---ITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEE  149 (353)
Q Consensus        76 ~k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaagsN---v~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~  149 (353)
                      .|++.|.|+|  |.||..+..-+.+.  .++|+.+..++.   -+.+.+..+++..+..++ .|-...+.+++.+.    
T Consensus        20 ~k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~----   93 (267)
T 3gdg_A           20 GKVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK----   93 (267)
T ss_dssp             TCEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH----
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH----
Confidence            4689999999  89999999888876  677776654432   233444444555555443 24444444444331    


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                               .+.  .+...+|++|+.
T Consensus        94 ---------~~~--~~~g~id~li~n  108 (267)
T 3gdg_A           94 ---------DVV--ADFGQIDAFIAN  108 (267)
T ss_dssp             ---------HHH--HHTSCCSEEEEC
T ss_pred             ---------HHH--HHcCCCCEEEEC
Confidence                     111  123468999986

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=90.61  E-value=0.24  Score=46.10  Aligned_cols=34  Identities=21%  Similarity=0.183  Sum_probs=29.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      +|+|.|.|+||+||...++-+.+.  .++|+++.-.
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~   62 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHE--GHYVIASDWK   62 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred             CCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECC
Confidence            578999999999999999988775  5889988643

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=90.59  E-value=2  Score=37.84  Aligned_cols=70  Identities=14%  Similarity=0.179  Sum_probs=44.8

Q ss_pred             CCCcEEEEeccCccCcHHHHHHHHcCCcEeeeccc----------------------------------------ceeec
Q 018600          167 PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE----------------------------------------TLIAG  206 (353)
Q Consensus       167 ~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKE----------------------------------------SLV~a  206 (353)
                      .+.-+|---++|+.=|+....|.+.+++|++..=+                                        .+|.|
T Consensus        69 ~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG  148 (196)
T 2q5c_A           69 VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVS  148 (196)
T ss_dssp             CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEEC
Confidence            34556666666666666666666666666654432                                        45666


Q ss_pred             ccchhHHhhhcCCeEeecCCchhHHHHhhc
Q 018600          207 GPFVLPLAHKHNIKILPADSEHSAIFQCIQ  236 (353)
Q Consensus       207 G~li~~~a~~~~~~IlPVDSEHsAIfQ~L~  236 (353)
                      |-+..++|+++|.+-+.+.|...+|.|.|+
T Consensus       149 ~~~~~~~A~~~Gl~~vli~sg~eSI~~Ai~  178 (196)
T 2q5c_A          149 GKTVTDEAIKQGLYGETINSGEESLRRAIE  178 (196)
T ss_dssp             CHHHHHHHHHTTCEEEECCCCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCcEEEEecCHHHHHHHHH
Confidence            666667777777777777776666666664

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=90.56  E-value=0.69  Score=43.33  Aligned_cols=93  Identities=14%  Similarity=0.098  Sum_probs=56.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -.+|.|+|+ |.||..++.+.+..  .. +|++.....  ++ .+.++++..+.++-.++.. +.+.             
T Consensus       196 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~~--~~-~~~a~~lGa~~vi~~~~~~-~~~~-------------  255 (376)
T 1e3i_A          196 GSTCAVFGL-GCVGLSAIIGCKIA--GASRIIAIDING--EK-FPKAKALGATDCLNPRELD-KPVQ-------------  255 (376)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCG--GG-HHHHHHTTCSEEECGGGCS-SCHH-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCCH--HH-HHHHHHhCCcEEEcccccc-chHH-------------
Confidence            368999996 99999999999986  45 687765332  22 2345778887765322100 0111             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                         +.+.++... .+|+|+++..+-..+.-.+.+++.|
T Consensus       256 ---~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~~  289 (376)
T 1e3i_A          256 ---DVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLG  289 (376)
T ss_dssp             ---HHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCTT
T ss_pred             ---HHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhcC
Confidence               122333333 7999999875544455555555544

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=90.51  E-value=0.38  Score=41.08  Aligned_cols=33  Identities=21%  Similarity=0.339  Sum_probs=27.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      |++.|.|+||.||..+.+-+.+.  .++|+++.-.
T Consensus         3 k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~   35 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKAR--GYRVVVLDLR   35 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccC
Confidence            67999999999999999988775  5788887543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=90.49  E-value=1.8  Score=39.27  Aligned_cols=83  Identities=11%  Similarity=0.022  Sum_probs=52.6

Q ss_pred             CeeEEEEecCC--hHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTG--SIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTG--SIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .|++.|.|+||  .||..+..-+.+.  .++|+.+.-.. ..+.+.+.++++....++..|-...+.+++.+.       
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-------  100 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFK-------  100 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH-------
Confidence            47899999998  9999999988876  67776654322 235555556665544444556555555555432       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEe
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                            .+.+  +...+|++|+.
T Consensus       101 ------~~~~--~~g~iD~lVnn  115 (296)
T 3k31_A          101 ------VLAE--EWGSLDFVVHA  115 (296)
T ss_dssp             ------HHHH--HHSCCSEEEEC
T ss_pred             ------HHHH--HcCCCCEEEEC
Confidence                  1111  12468999986

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=90.47  E-value=0.73  Score=43.26  Aligned_cols=90  Identities=14%  Similarity=0.250  Sum_probs=58.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -++|.|+|+ |.||..++.+.+..  ..+|++....  -+++....+++..+.+.-.++  .+                 
T Consensus       188 g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~Vi~~~~~--~~~~~~~~~~lGa~~v~~~~~--~~-----------------  243 (366)
T 1yqd_A          188 GKHIGIVGL-GGLGHVAVKFAKAF--GSKVTVISTS--PSKKEEALKNFGADSFLVSRD--QE-----------------  243 (366)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESC--GGGHHHHHHTSCCSEEEETTC--HH-----------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCC--HHHHHHHHHhcCCceEEeccC--HH-----------------
Confidence            368999996 99999999999986  4688876633  344443344788776643221  11                 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                         .+.++.  ..+|+|+++..+...+...+.+++.|-+
T Consensus       244 ---~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~  277 (366)
T 1yqd_A          244 ---QMQAAA--GTLDGIIDTVSAVHPLLPLFGLLKSHGK  277 (366)
T ss_dssp             ---HHHHTT--TCEEEEEECCSSCCCSHHHHHHEEEEEE
T ss_pred             ---HHHHhh--CCCCEEEECCCcHHHHHHHHHHHhcCCE
Confidence               122222  2699999998766677777776655433

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=90.46  E-value=0.78  Score=42.02  Aligned_cols=64  Identities=20%  Similarity=0.196  Sum_probs=41.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---C-CCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---K-PQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---k-Pk~V~i-~de~~~~~l~~~  143 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.++++   . .+..++ .|-...+.+++.
T Consensus        41 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~  109 (293)
T 3rih_A           41 ARSVLVTGGTKGIGRGIATVFARA--GANVAVAA--RSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADA  109 (293)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHH
Confidence            478999999999999999988876  57887654  4555554444444   3 344433 354444444443

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=90.42  E-value=1.2  Score=39.74  Aligned_cols=66  Identities=15%  Similarity=0.112  Sum_probs=42.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe-ecCCHHHHHHHHHh---hCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA-AGSNITLLADQVKR---FKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa-agsNv~lL~~Q~~e---FkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|.+.|.|+||-||..+..-+.+.  .++|+.+. ..+|.+.+.+..++   ..++...+ .|-...+.++..
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            368999999999999999888775  67787764 24455555554444   44555443 344444444443

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=90.41  E-value=0.83  Score=42.08  Aligned_cols=91  Identities=14%  Similarity=0.187  Sum_probs=57.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .-++|.|.|+ |.||..++.+.+..  ..+|++...  +-+++ +.++++..+.+.-.++...   .             
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~--Ga~Vi~~~~--~~~~~-~~~~~lGa~~~i~~~~~~~---~-------------  223 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAM--GLRVAAVDI--DDAKL-NLARRLGAEVAVNARDTDP---A-------------  223 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHT--TCEEEEEES--CHHHH-HHHHHTTCSEEEETTTSCH---H-------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEeC--CHHHH-HHHHHcCCCEEEeCCCcCH---H-------------
Confidence            3468999997 89999999999987  568888754  33443 4678899888765433211   1             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                         +.+.+ .. ..+|.|++...+-..+.-.+.+++.|
T Consensus       224 ---~~~~~-~~-g~~d~vid~~g~~~~~~~~~~~l~~~  256 (340)
T 3s2e_A          224 ---AWLQK-EI-GGAHGVLVTAVSPKAFSQAIGMVRRG  256 (340)
T ss_dssp             ---HHHHH-HH-SSEEEEEESSCCHHHHHHHHHHEEEE
T ss_pred             ---HHHHH-hC-CCCCEEEEeCCCHHHHHHHHHHhccC
Confidence               11222 11 26889998865544444444444433

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=90.40  E-value=1.6  Score=38.89  Aligned_cols=62  Identities=23%  Similarity=0.238  Sum_probs=40.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh----hCCCEEEE-eCccchHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR----FKPQVVAV-RNESLLDEIK  141 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e----FkPk~V~i-~de~~~~~l~  141 (353)
                      .|++.|.|+||-||..+.+-+.+.  .++|+.+  .+|.+.+.+..++    +..+...+ .|-...+.++
T Consensus        20 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~   86 (266)
T 4egf_A           20 GKRALITGATKGIGADIARAFAAA--GARLVLS--GRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPA   86 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            368999999999999999988876  5677654  3566666555444    45555443 3433333333

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=90.40  E-value=2  Score=39.58  Aligned_cols=53  Identities=15%  Similarity=0.196  Sum_probs=39.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~  132 (353)
                      .-++|.|.|++|.||..++.+.+..  ..+|++......  ++ +.++++..+.+.-.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~--~~-~~~~~lga~~~~~~  196 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNK--HT-EELLRLGAAYVIDT  196 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSST--TH-HHHHHHTCSEEEET
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHH--HH-HHHHhCCCcEEEeC
Confidence            3468999999999999999999876  468888764332  22 34566788876643

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=90.40  E-value=0.23  Score=44.63  Aligned_cols=34  Identities=21%  Similarity=0.413  Sum_probs=28.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ++|.|.|+||.||....+-+.+....++|+++.-
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r   37 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK   37 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence            4699999999999999998887544589999864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=90.38  E-value=0.19  Score=44.95  Aligned_cols=32  Identities=28%  Similarity=0.480  Sum_probs=24.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||+|.|.|+||+||....+-+.+..   .++++..
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g---~~v~~~~   32 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN---EIVVIDN   32 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS---CEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC---CEEEEEc
Confidence            5789999999999999999888753   5666654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=90.37  E-value=0.92  Score=40.68  Aligned_cols=32  Identities=22%  Similarity=0.249  Sum_probs=26.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~   54 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHY   54 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEe
Confidence            367999999999999999988875  57777654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=90.26  E-value=0.47  Score=44.71  Aligned_cols=95  Identities=14%  Similarity=0.136  Sum_probs=57.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc-hHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~-~~~l~~~l~~~~~~~~v  153 (353)
                      -.+|.|.|+ |.||..++.+.+..  .+ +|++..  ++-++ .+.++++..+.+.-.+... .+.+++..         
T Consensus       183 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~--~~~~~-~~~a~~lGa~~vi~~~~~~~~~~i~~~~---------  247 (370)
T 4ej6_A          183 GSTVAILGG-GVIGLLTVQLARLA--GATTVILST--RQATK-RRLAEEVGATATVDPSAGDVVEAIAGPV---------  247 (370)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEC--SCHHH-HHHHHHHTCSEEECTTSSCHHHHHHSTT---------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEC--CCHHH-HHHHHHcCCCEEECCCCcCHHHHHHhhh---------
Confidence            368999998 99999999999986  45 676654  33344 3477888888776432221 11222100         


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                              .+.. ..+|+|+++..+-..+.-.+.+++.|-+
T Consensus       248 --------~~~~-gg~Dvvid~~G~~~~~~~~~~~l~~~G~  279 (370)
T 4ej6_A          248 --------GLVP-GGVDVVIECAGVAETVKQSTRLAKAGGT  279 (370)
T ss_dssp             --------SSST-TCEEEEEECSCCHHHHHHHHHHEEEEEE
T ss_pred             --------hccC-CCCCEEEECCCCHHHHHHHHHHhccCCE
Confidence                    0111 2699999986544445555555554433

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=90.25  E-value=0.66  Score=43.90  Aligned_cols=89  Identities=13%  Similarity=0.117  Sum_probs=62.1

Q ss_pred             eeEEEEe-cCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc-hHHHHHHhhcCCCCcEEE
Q 018600           77 KPISVLG-STGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEIL  154 (353)
Q Consensus        77 k~I~ILG-STGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~-~~~l~~~l~~~~~~~~v~  154 (353)
                      .+|.|+| ++|.||..++.+.+..  ..+|++.+.  +-+++ +.++++..+.+.-.++.. .+++++            
T Consensus       172 ~~vlV~gag~G~vG~~a~q~a~~~--Ga~Vi~~~~--~~~~~-~~~~~lGa~~~~~~~~~~~~~~v~~------------  234 (379)
T 3iup_A          172 HSALVHTAAASNLGQMLNQICLKD--GIKLVNIVR--KQEQA-DLLKAQGAVHVCNAASPTFMQDLTE------------  234 (379)
T ss_dssp             CSCEEESSTTSHHHHHHHHHHHHH--TCCEEEEES--SHHHH-HHHHHTTCSCEEETTSTTHHHHHHH------------
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHC--CCEEEEEEC--CHHHH-HHHHhCCCcEEEeCCChHHHHHHHH------------
Confidence            5799997 9999999999999986  457888763  44443 466788888776543322 222332            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIE  190 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~  190 (353)
                              +.....+|+|+++..|-..+...+.+++
T Consensus       235 --------~t~~~g~d~v~d~~g~~~~~~~~~~~l~  262 (379)
T 3iup_A          235 --------ALVSTGATIAFDATGGGKLGGQILTCME  262 (379)
T ss_dssp             --------HHHHHCCCEEEESCEEESHHHHHHHHHH
T ss_pred             --------HhcCCCceEEEECCCchhhHHHHHHhcc
Confidence                    2222359999999877666777777775

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=90.22  E-value=2.3  Score=37.74  Aligned_cols=84  Identities=11%  Similarity=0.015  Sum_probs=48.8

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCHH-HHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNIT-LLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaagsNv~-lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .|++.|.|+|  |.||..+..-+.+.  .++|+.+.-+...+ .+.+...++..-.+...|-...+.+++.+.       
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~-------   76 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYN-------   76 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHH-------
Confidence            4789999999  99999999998876  57887765332212 333333333222233345554555554331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            .+.  .+...+|++|+..
T Consensus        77 ------~~~--~~~g~id~lv~nA   92 (275)
T 2pd4_A           77 ------SVK--KDLGSLDFIVHSV   92 (275)
T ss_dssp             ------HHH--HHTSCEEEEEECC
T ss_pred             ------HHH--HHcCCCCEEEECC
Confidence                  111  1234689988864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=90.14  E-value=0.31  Score=45.08  Aligned_cols=90  Identities=13%  Similarity=0.102  Sum_probs=55.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      ...+|.|+|+ |.||..++.+.+..  .. +|++..  ++-+++ +.++++ .+.+.-.+++.   +.            
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~~Vi~~~--~~~~~~-~~~~~l-a~~v~~~~~~~---~~------------  221 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRAS--GAGPILVSD--PNPYRL-AFARPY-ADRLVNPLEED---LL------------  221 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHT--TCCSEEEEC--SCHHHH-GGGTTT-CSEEECTTTSC---HH------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEC--CCHHHH-HHHHHh-HHhccCcCccC---HH------------
Confidence            4468999999 99999999999986  45 687765  343443 455667 66654322211   11            


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                          +.+.++. ...+|+|+++..+...+.-.+.+++.
T Consensus       222 ----~~~~~~~-~~g~D~vid~~g~~~~~~~~~~~l~~  254 (343)
T 2dq4_A          222 ----EVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIP  254 (343)
T ss_dssp             ----HHHHHHH-SSCEEEEEECSCCHHHHHHHHHHEEE
T ss_pred             ----HHHHHhc-CCCCCEEEECCCCHHHHHHHHHHHhc
Confidence                1223333 34699999997654445544554443

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=90.00  E-value=0.84  Score=42.72  Aligned_cols=93  Identities=13%  Similarity=0.168  Sum_probs=55.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -++|.|.|+ |.||..++.+.+..  .. +|++.....  +++ +.++++..+.++-.++. -+.+.             
T Consensus       193 g~~VlV~Ga-G~vG~~a~qla~~~--Ga~~Vi~~~~~~--~~~-~~~~~lGa~~vi~~~~~-~~~~~-------------  252 (374)
T 1cdo_A          193 GSTCAVFGL-GAVGLAAVMGCHSA--GAKRIIAVDLNP--DKF-EKAKVFGATDFVNPNDH-SEPIS-------------  252 (374)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCG--GGH-HHHHHTTCCEEECGGGC-SSCHH-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCCH--HHH-HHHHHhCCceEEecccc-chhHH-------------
Confidence            368999996 99999999999986  45 687765332  222 34567888776532210 00111             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                         +.+.++... .+|+|++++.+-..+.-.+.+++.|
T Consensus       253 ---~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~  286 (374)
T 1cdo_A          253 ---QVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKG  286 (374)
T ss_dssp             ---HHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred             ---HHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcC
Confidence               122333333 6999999875544455445555443

>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A

Probab=90.00  E-value=3.3  Score=32.46  Aligned_cols=103  Identities=12%  Similarity=0.014  Sum_probs=64.4

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        72 ~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      .-..|.+|.|+...-.+-...-+.+++..+.|.|..   -.|.+.+.+.+++.+|+.+.+.-.-         .+     
T Consensus        16 ~~~~m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~---~~~~~~al~~l~~~~~dlii~D~~l---------~~-----   78 (150)
T 4e7p_A           16 PRGSHMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQ---AKNGQEAIQLLEKESVDIAILDVEM---------PV-----   78 (150)
T ss_dssp             ----CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEE---ESSHHHHHHHHTTSCCSEEEECSSC---------SS-----
T ss_pred             CCCCccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEE---ECCHHHHHHHhhccCCCEEEEeCCC---------CC-----
Confidence            335678999999999999888889988765455543   3578888899999999998874210         00     


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                        ..|.+-+.++-+. ..++-+..+++.....-...+++.|-.
T Consensus        79 --~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~  118 (150)
T 4e7p_A           79 --KTGLEVLEWIRSE-KLETKVVVVTTFKRAGYFERAVKAGVD  118 (150)
T ss_dssp             --SCHHHHHHHHHHT-TCSCEEEEEESCCCHHHHHHHHHTTCS
T ss_pred             --CcHHHHHHHHHHh-CCCCeEEEEeCCCCHHHHHHHHHCCCc
Confidence              1122223333222 344555556666666666677777644

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=89.95  E-value=1.1  Score=40.20  Aligned_cols=30  Identities=27%  Similarity=0.404  Sum_probs=26.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|.|.|+||.||..+.+-+.+.  .++|+++.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~   31 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQN--GHDVIILD   31 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence            6999999999999999988775  58898875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=89.93  E-value=0.95  Score=40.15  Aligned_cols=66  Identities=9%  Similarity=0.077  Sum_probs=42.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH---hhCCCEEEE-eCccchHHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK---RFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~---eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      ..|.+.|.|+||.||..+.+-+.+.  .++|+.+. .++-+.+.+...   +..++...+ .|-...+.+++.
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   93 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDA--GMAVAVSH-SERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERC   93 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEE-CSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEc-CCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            3477899999999999999988876  67776654 455565554443   334444433 354445555543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=89.92  E-value=2.2  Score=36.88  Aligned_cols=64  Identities=14%  Similarity=0.106  Sum_probs=41.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+..+ +.+.+.+.   +++..++...+ .|-...+.++.
T Consensus         7 ~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   74 (255)
T 3icc_A            7 GKVALVTGASRGIGRAIAKRLAND--GALVAIHYGN-RKEEAEETVYEIQSNGGSAFSIGANLESLHGVEA   74 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESS-CSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCC-chHHHHHHHHHHHhcCCceEEEecCcCCHHHHHH
Confidence            478999999999999999998876  5777765544 44444443   44444554443 34444444443

>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=89.90  E-value=0.46  Score=45.73  Aligned_cols=106  Identities=17%  Similarity=0.204  Sum_probs=65.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhC--CCceEEEEEeecCCHHHHHHHH--HhhCCCE---EEEeCccchHHHHHHhhcCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEH--EDKFRVVALAAGSNITLLADQV--KRFKPQV---VAVRNESLLDEIKEALANVEE  149 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~--pd~F~VvaLaagsNv~lL~~Q~--~eFkPk~---V~i~de~~~~~l~~~l~~~~~  149 (353)
                      +||+|.|+ |-||...++++.+|  | +|+|+++......+.+....  ..-.+++   |...+....      .  .+.
T Consensus         1 ~kVgI~G~-G~iGr~llR~l~~~~~p-~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~------v--~g~   70 (332)
T 1hdg_O            1 ARVAINGF-GRIGRLVYRIIYERKNP-DIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLI------V--DGK   70 (332)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCT-TCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEE------E--TTE
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhCCCC-CeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEE------E--CCe
Confidence            37999999 99999999999988  5 59999998877777776555  2223332   221111100      0  011


Q ss_pred             CcEEEecHHHHHHH-hcCCCCcEEEEeccCccCcHHHHHHHHcCC
Q 018600          150 KPEILAGEQGVIEA-ARHPDAVTVVTGIVGCAGLKPTVAAIEAGK  193 (353)
Q Consensus       150 ~~~v~~G~~gl~~~-a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK  193 (353)
                      ..+++.- ....++ ....++|+|+.+.-.+...+-.-..+++|.
T Consensus        71 ~i~v~~~-~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGa  114 (332)
T 1hdg_O           71 EIKVFAE-PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGA  114 (332)
T ss_dssp             EEEEECC-SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTC
T ss_pred             EEEEEec-CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCC
Confidence            1223211 111111 011168999999888888777777888885

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=89.86  E-value=0.28  Score=45.47  Aligned_cols=33  Identities=18%  Similarity=0.287  Sum_probs=28.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|+|.|.|+||.||...++-+.+.. .++|+++.
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~   64 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELG-VNQVHVVD   64 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcC-CceEEEEE
Confidence            4689999999999999999888752 28899885

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=89.86  E-value=2.4  Score=37.08  Aligned_cols=65  Identities=11%  Similarity=0.080  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC-CCceEEEEEeecCCHHHHHHHHHhh-----CCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEH-EDKFRVVALAAGSNITLLADQVKRF-----KPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~-pd~F~VvaLaagsNv~lL~~Q~~eF-----kPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||-||..+..-+.+. ...++|+.+.  +|.+.+.+..++.     ..+...+ .|-...+.+++
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~   77 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSA--RSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQR   77 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEE--SCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEe--CCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHH
Confidence            478999999999999999988873 2367888753  5666665555443     2333333 35444444444

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=89.85  E-value=1  Score=41.29  Aligned_cols=66  Identities=24%  Similarity=0.228  Sum_probs=44.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----------CCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----------SNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----------sNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.-+           ...+.+.+.+.+..++...+ .|-...+.+++.
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            467999999999999999988876  6788876432           33556666666666665554 344444444443

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=89.82  E-value=0.68  Score=43.32  Aligned_cols=93  Identities=10%  Similarity=0.064  Sum_probs=55.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -.+|.|+|+ |.||..++.+.+..  .. +|++.....  ++ .+.++++..+.++-.++.. +.+.             
T Consensus       192 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~~Vi~~~~~~--~~-~~~a~~lGa~~vi~~~~~~-~~~~-------------  251 (373)
T 1p0f_A          192 GSTCAVFGL-GGVGFSAIVGCKAA--GASRIIGVGTHK--DK-FPKAIELGATECLNPKDYD-KPIY-------------  251 (373)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECSCG--GG-HHHHHHTTCSEEECGGGCS-SCHH-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEECCCH--HH-HHHHHHcCCcEEEeccccc-chHH-------------
Confidence            368999996 99999999999876  45 677765332  22 2346778887765322100 0111             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                         +.+.++... .+|+|+++..+-..+.-.+.+++.|
T Consensus       252 ---~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~~  285 (373)
T 1p0f_A          252 ---EVICEKTNG-GVDYAVECAGRIETMMNALQSTYCG  285 (373)
T ss_dssp             ---HHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred             ---HHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhcC
Confidence               122333333 6999999875544455445555443

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=89.81  E-value=0.13  Score=45.26  Aligned_cols=33  Identities=15%  Similarity=0.186  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +|+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r   34 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDI   34 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCS
T ss_pred             CceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeC
Confidence            478999999999999998887765  588988753

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=89.68  E-value=1.1  Score=42.01  Aligned_cols=93  Identities=10%  Similarity=0.087  Sum_probs=56.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -++|.|+|+ |.||..++.+.+..  .. +|++.....  ++ .+.++++..+.++-.++.. +.+.             
T Consensus       192 g~~VlV~Ga-G~vG~~a~qla~~~--Ga~~Vi~~~~~~--~~-~~~~~~lGa~~vi~~~~~~-~~~~-------------  251 (374)
T 2jhf_A          192 GSTCAVFGL-GGVGLSVIMGCKAA--GAARIIGVDINK--DK-FAKAKEVGATECVNPQDYK-KPIQ-------------  251 (374)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCG--GG-HHHHHHTTCSEEECGGGCS-SCHH-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCCH--HH-HHHHHHhCCceEecccccc-hhHH-------------
Confidence            368999995 99999999999986  45 687765322  22 2345678887765322100 0111             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                         +.+.++... .+|+|++++.+-..+.-.+.+++.|
T Consensus       252 ---~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~  285 (374)
T 2jhf_A          252 ---EVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEA  285 (374)
T ss_dssp             ---HHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCTT
T ss_pred             ---HHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcC
Confidence               122333333 6999999976545555555655554

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=89.67  E-value=0.85  Score=39.89  Aligned_cols=46  Identities=11%  Similarity=0.012  Sum_probs=36.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-gsNv~lL~~Q~~eF  124 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.. .+|.+.+.+..+++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~r~~~~~~~~~~~~   48 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQD--GYTVVCHDASFADAAERQRFESEN   48 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHS
T ss_pred             CEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCcCCHHHHHHHHHHh
Confidence            68999999999999999988876  577776422 16778887777766

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=89.66  E-value=1.6  Score=39.28  Aligned_cols=65  Identities=12%  Similarity=0.077  Sum_probs=41.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEE-eCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAV-RNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~  142 (353)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+.-+. ..+.+.+.+++...+...+ .|-...+.++.
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   99 (275)
T 4imr_A           33 GRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTD   99 (275)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHH
Confidence            378999999999999999998876  56777654322 3345555555555655544 24333333433

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=89.65  E-value=2  Score=38.36  Aligned_cols=84  Identities=17%  Similarity=0.106  Sum_probs=48.0

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCHH-HHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNIT-LLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaagsNv~-lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .|++.|.|+|  |.||..+..-+.+.  .++|+.+.-+...+ .+.+...+...-.+...|-...+.+++.+.       
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~-------   91 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKK-------   91 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH-------
Confidence            3679999999  99999999988876  57887764322111 333332323212233345444445544331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            .+.  .+...+|++|+..
T Consensus        92 ------~~~--~~~g~iD~lv~~A  107 (285)
T 2p91_A           92 ------FLE--ENWGSLDIIVHSI  107 (285)
T ss_dssp             ------HHH--HHTSCCCEEEECC
T ss_pred             ------HHH--HHcCCCCEEEECC
Confidence                  111  1234689998863

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=89.52  E-value=1.8  Score=38.92  Aligned_cols=64  Identities=16%  Similarity=0.047  Sum_probs=41.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~-i~de~~~~~l~~~  143 (353)
                      .|.+.|.|+||-||..+..-+.+.  .++|+.+.  +|-+.+.+   .+++...+... ..|-...+.+++.
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   95 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARR--GAMVIGTA--TTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDAL   95 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHH
Confidence            467999999999999999888876  57777654  45555544   44444444333 2354444444443

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=89.18  E-value=0.35  Score=42.52  Aligned_cols=32  Identities=13%  Similarity=0.248  Sum_probs=27.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +++|.|.|| |+||...++-+.+.  .++|++++-
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~--g~~V~~~~r   36 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQ--GWRIIGTSR   36 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGG--TCEEEEEES
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHC--CCEEEEEEc
Confidence            468999998 99999999998875  689999863

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=89.13  E-value=0.39  Score=43.23  Aligned_cols=33  Identities=21%  Similarity=0.280  Sum_probs=27.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhC-CCc---eEEEEEee
Q 018600           78 PISVLGSTGSIGTQTLDIVAEH-EDK---FRVVALAA  110 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~-pd~---F~VvaLaa  110 (353)
                      +|.|.|+||.||....+-+.+. ...   ++|+++.-
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r   38 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS   38 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence            6999999999999999888763 324   89999863

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=89.11  E-value=1.9  Score=37.99  Aligned_cols=84  Identities=18%  Similarity=0.139  Sum_probs=48.5

Q ss_pred             CeeEEEEecC--ChHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGST--GSIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGST--GSIGtqTLdVI~~~pd~F~VvaLaagsNv-~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      .|++.|.|+|  |.||..+.+-+.+.  .++|+.+.-+... +.+.+...++..-.+...|-...+.+++.+.       
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~-------   78 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFA-------   78 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHH-------
Confidence            4679999999  99999999988875  5778776432211 1333333333322333345555555554331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            .+.+  +...+|+||+..
T Consensus        79 ------~~~~--~~g~iD~lv~~A   94 (261)
T 2wyu_A           79 ------GVKE--AFGGLDYLVHAI   94 (261)
T ss_dssp             ------HHHH--HHSSEEEEEECC
T ss_pred             ------HHHH--HcCCCCEEEECC
Confidence                  1111  123688888864

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=89.03  E-value=0.87  Score=42.47  Aligned_cols=93  Identities=14%  Similarity=0.145  Sum_probs=55.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -.+|.|.|+ |.||..++.+.+..  .. +|++.....  ++ .+.++++..+.++-.++. -+.+.             
T Consensus       191 g~~VlV~Ga-G~vG~~avqla~~~--Ga~~Vi~~~~~~--~~-~~~~~~lGa~~vi~~~~~-~~~~~-------------  250 (373)
T 2fzw_A          191 GSVCAVFGL-GGVGLAVIMGCKVA--GASRIIGVDINK--DK-FARAKEFGATECINPQDF-SKPIQ-------------  250 (373)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCSEEEEECSCG--GG-HHHHHHHTCSEEECGGGC-SSCHH-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHc--CCCeEEEEcCCH--HH-HHHHHHcCCceEeccccc-cccHH-------------
Confidence            368999996 99999999999976  45 687765332  22 234567787776532210 00111             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                         +.+.++... .+|+|+++..+...+...+.+++.|
T Consensus       251 ---~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~  284 (373)
T 2fzw_A          251 ---EVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKG  284 (373)
T ss_dssp             ---HHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred             ---HHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhccC
Confidence               122333333 6999999876544455555555443

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=88.92  E-value=1.2  Score=38.73  Aligned_cols=39  Identities=21%  Similarity=0.288  Sum_probs=29.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~  119 (353)
                      |++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~--r~~~~~~~   41 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVAR--GYRVAIAS--RNPEEAAQ   41 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SSCHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHH
Confidence            67999999999999999988875  57887754  34444433

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=88.80  E-value=0.31  Score=44.01  Aligned_cols=32  Identities=25%  Similarity=0.373  Sum_probs=27.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|+|.|.|+||+||....+-+.+.  .++|+++.
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~   36 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLER--GYTVRATV   36 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEE
Confidence            468999999999999999888764  58898875

>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}

Probab=88.77  E-value=1.8  Score=40.50  Aligned_cols=107  Identities=22%  Similarity=0.254  Sum_probs=61.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-gsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      ...+++|.|+||..|+..++-+.++  .|++++-.- ++.-+       +       +.                 +..+
T Consensus        12 ~~~~vvV~Gasg~~G~~~~~~l~~~--g~~~v~~VnP~~~g~-------~-------i~-----------------G~~v   58 (297)
T 2yv2_A           12 SETRVLVQGITGREGSFHAKAMLEY--GTKVVAGVTPGKGGS-------E-------VH-----------------GVPV   58 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECTTCTTC-------E-------ET-----------------TEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHhC--CCcEEEEeCCCCCCc-------e-------EC-----------------CEee
Confidence            3446777899999999988888876  577554221 11000       0       00                 1223


Q ss_pred             EecHHHHHHHhc-CCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecc------cchhHHhhhcCCeEe
Q 018600          154 LAGEQGVIEAAR-HPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG------PFVLPLAHKHNIKIL  222 (353)
Q Consensus       154 ~~G~~gl~~~a~-~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG------~li~~~a~~~~~~Il  222 (353)
                      +.-   +.++.. +.++|+++.......-..-..+|+++|.+.++-     +..|      .-+.+.|++++.+++
T Consensus        59 y~s---l~el~~~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi-----~t~G~~~~~~~~l~~~A~~~gi~vi  126 (297)
T 2yv2_A           59 YDS---VKEALAEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVV-----ITEGIPVHDTMRFVNYARQKGATII  126 (297)
T ss_dssp             ESS---HHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEE-----CCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             eCC---HHHHhhcCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE-----ECCCCCHHHHHHHHHHHHHcCCEEE
Confidence            322   222222 223788888877777777777888888773221     1222      245667777777666

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=88.67  E-value=1.4  Score=39.10  Aligned_cols=44  Identities=20%  Similarity=0.201  Sum_probs=32.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|-+.+.+.+++
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~~~~   53 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAE--GANVLING--RREENVNETIKE   53 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEe--CCHHHHHHHHHH
Confidence            368999999999999999888875  57777653  566655554443

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=88.34  E-value=4.6  Score=31.19  Aligned_cols=44  Identities=14%  Similarity=0.215  Sum_probs=31.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      ++|+|+|+ |.+|......+.+.  .++|+.+.  +|-+.+.+..+++.
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~--g~~v~~~d--~~~~~~~~~~~~~~   48 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEK--GHDIVLID--IDKDICKKASAEID   48 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC--CCeEEEEE--CCHHHHHHHHHhcC
Confidence            47999997 99999999998876  46777654  46565544444443

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=88.29  E-value=0.98  Score=40.48  Aligned_cols=41  Identities=20%  Similarity=0.282  Sum_probs=31.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ  120 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q  120 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+.+.  +|.+.+.+.
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~--r~~~~~~~~   56 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEE--GHPLLLLA--RRVERLKAL   56 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEE--SCHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHh
Confidence            367999999999999999988876  56777653  566666543

>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0

Probab=88.26  E-value=3  Score=37.82  Aligned_cols=131  Identities=15%  Similarity=0.247  Sum_probs=71.6

Q ss_pred             CCeeEEEEecC-ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc------hHHHHHHhhcC
Q 018600           75 GPKPISVLGST-GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL------LDEIKEALANV  147 (353)
Q Consensus        75 ~~k~I~ILGST-GSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~------~~~l~~~l~~~  147 (353)
                      .++||+||.|. ||--+..++-+++. -.++|+++..++--..-.+.|+++.-.+..+...+.      -.++.+.+...
T Consensus         4 ~~~riavl~SG~Gsnl~all~~~~~~-~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~   82 (215)
T 3tqr_A            4 EPLPIVVLISGNGTNLQAIIGAIQKG-LAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKTIDHY   82 (215)
T ss_dssp             CCEEEEEEESSCCHHHHHHHHHHHTT-CSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTT
T ss_pred             CCcEEEEEEeCCcHHHHHHHHHHHcC-CCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCccccCchhHhHHHHHHHHHhc
Confidence            36789999764 44444444444443 469999998865322224678888876666532111      12333444443


Q ss_pred             CCCcEEEecH-----HHHHHHhcCCCCcEEEEe----ccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          148 EEKPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       148 ~~~~~v~~G~-----~gl~~~a~~~~~D~Vv~A----IvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      +.+.-|+.|-     +.+.+....    -++|-    +..+-|..|...|+.+|-+     +-..+.+  +=.|++|.+
T Consensus        83 ~~Dliv~agy~~il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  155 (215)
T 3tqr_A           83 DPKLIVLAGFMRKLGKAFVSHYSG----RMINIHPSLLPKYTGLNTHERALAAGETEHGVSVHYVTED--LDAGPLICQ  155 (215)
T ss_dssp             CCSEEEESSCCSCCCHHHHHHTTT----SEEEEESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECC-C--TTCSCEEEE
T ss_pred             CCCEEEEccchhhCCHHHHhhccC----CeEEeCcccCCCCCChhHHHHHHHcCCCeEEEEEEEEcCC--CCCCCEEEE
Confidence            4444455443     233333221    12332    3456788899999999853     3344443  456777744

>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}

Probab=88.22  E-value=0.88  Score=37.75  Aligned_cols=33  Identities=15%  Similarity=0.262  Sum_probs=25.4

Q ss_pred             CCCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEE
Q 018600           74 DGPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        74 ~~~k~I~ILGST---GSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      ..||+|+|+|++   ++.|...++-+.++  .|+|..+
T Consensus         2 ~~p~siAVVGaS~~~~~~g~~v~~~L~~~--g~~V~pV   37 (122)
T 3ff4_A            2 NAMKKTLILGATPETNRYAYLAAERLKSH--GHEFIPV   37 (122)
T ss_dssp             CCCCCEEEETCCSCTTSHHHHHHHHHHHH--TCCEEEE
T ss_pred             CCCCEEEEEccCCCCCCHHHHHHHHHHHC--CCeEEEE
Confidence            458999999997   78899988888775  4555543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=88.19  E-value=1  Score=41.83  Aligned_cols=46  Identities=22%  Similarity=0.219  Sum_probs=33.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe-------ecCCHHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA-------AGSNITLLADQVKR  123 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa-------agsNv~lL~~Q~~e  123 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.       .++|.+.+.+.+++
T Consensus         9 gk~~lVTGas~GIG~~~a~~La~~--Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~   61 (319)
T 1gz6_A            9 GRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEE   61 (319)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCcccccccCCHHHHHHHHHH
Confidence            368999999999999999998876  57887753       23455555444333

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=88.19  E-value=1.1  Score=37.29  Aligned_cols=107  Identities=14%  Similarity=0.122  Sum_probs=60.0

Q ss_pred             CCCCCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCC
Q 018600           72 TWDGPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE  148 (353)
Q Consensus        72 ~~~~~k~I~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~  148 (353)
                      ....|++|+|+|+|   |++|...+.-+.+.  .|+|....-..              +-+  ..               
T Consensus        10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~--------------~~i--~G---------------   56 (138)
T 1y81_A           10 NSKEFRKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNY--------------DEI--EG---------------   56 (138)
T ss_dssp             ----CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTC--------------SEE--TT---------------
T ss_pred             cccCCCeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCC--------------CeE--CC---------------
Confidence            45678999999998   99999999988875  67766543211              000  10               


Q ss_pred             CCcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHH-HHHHcCCcEeeecccceeecccchhHHhhhcCCeEe
Q 018600          149 EKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTV-AAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       149 ~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~-~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il  222 (353)
                        .+++.   .+.++..  ++|+++.++.. .-...++ .++++|.+-.+-+-.+.   -+-+.+.|+++|.+++
T Consensus        57 --~~~~~---s~~el~~--~vDlvii~vp~-~~v~~v~~~~~~~g~~~i~~~~~~~---~~~l~~~a~~~Gi~~i  120 (138)
T 1y81_A           57 --LKCYR---SVRELPK--DVDVIVFVVPP-KVGLQVAKEAVEAGFKKLWFQPGAE---SEEIRRFLEKAGVEYS  120 (138)
T ss_dssp             --EECBS---SGGGSCT--TCCEEEECSCH-HHHHHHHHHHHHTTCCEEEECTTSC---CHHHHHHHHHHTCEEE
T ss_pred             --eeecC---CHHHhCC--CCCEEEEEeCH-HHHHHHHHHHHHcCCCEEEEcCccH---HHHHHHHHHHCCCEEE
Confidence              11111   1122222  47888888774 3333333 46677766544443332   2445667778887766

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=88.12  E-value=1.8  Score=42.94  Aligned_cols=70  Identities=17%  Similarity=0.294  Sum_probs=43.5

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceE-EEEEeecC-----CHHHHHHHHHhhCCCEEEE-eCccchHHHHHHh
Q 018600           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFR-VVALAAGS-----NITLLADQVKRFKPQVVAV-RNESLLDEIKEAL  144 (353)
Q Consensus        72 ~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~-VvaLaags-----Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l  144 (353)
                      .|...+++.|.|+||.||....+-+.+.  .++ |+.+ .++     ..+.+.+..+....+..++ .|-...+.++..+
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~-~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~  298 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLV-SRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELL  298 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEE-ESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEE-cCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHH
Confidence            4677789999999999999999888765  454 5544 333     2345555555555544333 3444444555443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=88.07  E-value=2.3  Score=33.06  Aligned_cols=37  Identities=22%  Similarity=0.313  Sum_probs=27.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL  117 (353)
                      +++|.|+|+ |.+|....+.+.+..  ++|+.+.  +|-+.+
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g--~~v~~~d--~~~~~~   42 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMG--HEVLAVD--INEEKV   42 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT--CCCEEEE--SCHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCC--CEEEEEe--CCHHHH
Confidence            467999998 999999999998763  5666543  454444

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=88.07  E-value=1.2  Score=40.46  Aligned_cols=45  Identities=22%  Similarity=0.326  Sum_probs=33.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|+|++|-||..+...+.+.  ..+|+. + +++.+.+.+.++++
T Consensus       119 gk~vlVtGaaGGiG~aia~~L~~~--G~~V~i-~-~R~~~~~~~l~~~~  163 (287)
T 1lu9_A          119 GKKAVVLAGTGPVGMRSAALLAGE--GAEVVL-C-GRKLDKAQAAADSV  163 (287)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEE-E-ESSHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEE-E-ECCHHHHHHHHHHH
Confidence            368999999999999999998886  456443 3 45667666665554

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=88.06  E-value=0.6  Score=42.10  Aligned_cols=35  Identities=11%  Similarity=0.279  Sum_probs=27.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC-----ceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHED-----KFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd-----~F~VvaLaa  110 (353)
                      .++|.|.|+||+||....+-+.+...     .++|+++.-
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r   53 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV   53 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc
Confidence            46899999999999999988876521     178888763

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=88.06  E-value=2.3  Score=42.58  Aligned_cols=82  Identities=16%  Similarity=0.227  Sum_probs=49.5

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-----CHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhh
Q 018600           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-----NITLLADQVKRFKPQVVAV-RNESLLDEIKEALA  145 (353)
Q Consensus        72 ~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-----Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~  145 (353)
                      .|...+++.|.|+||.||....+-+.++  .++.+.|..++     ..+.+.+..+....+..++ .|-...+.+++.  
T Consensus       255 ~~~~~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~--  330 (511)
T 2z5l_A          255 SWQPSGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAAL--  330 (511)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHH--
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHH--
Confidence            4667789999999999999999888765  45333333333     2344544455444444333 343333344332  


Q ss_pred             cCCCCcEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          146 NVEEKPEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       146 ~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                                        .+...+|.||+.
T Consensus       331 ------------------~~~~~ld~VVh~  342 (511)
T 2z5l_A          331 ------------------VTAYPPNAVFHT  342 (511)
T ss_dssp             ------------------HHHSCCSEEEEC
T ss_pred             ------------------HhcCCCcEEEEC
Confidence                              222468999886

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=87.87  E-value=0.48  Score=40.57  Aligned_cols=34  Identities=24%  Similarity=0.344  Sum_probs=27.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|+|.|.|+||.||..+.+-+.+.....+|+++.
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~   51 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIG   51 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEE
Confidence            3689999999999999999888753211888875

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=87.84  E-value=0.69  Score=43.27  Aligned_cols=50  Identities=14%  Similarity=0.112  Sum_probs=36.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVV  129 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V  129 (353)
                      .++|.|.|+ |.||..++.+.+..  ..+|++..... +.+++ +.++++..+.+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~-~~~~~~ga~~v  231 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTY--GLEVWMANRREPTEVEQ-TVIEETKTNYY  231 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHH--TCEEEEEESSCCCHHHH-HHHHHHTCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEEeCCccchHHH-HHHHHhCCcee
Confidence            468999999 99999999999976  45888865432 11444 56677877665

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=87.77  E-value=0.36  Score=51.06  Aligned_cols=96  Identities=14%  Similarity=0.164  Sum_probs=58.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -.+|.|.|++|.||..++.+.+..  ..+|++.+...+.+.     .++..++++-.....+                  
T Consensus       346 G~~VLI~gaaGgvG~~aiqlAk~~--Ga~V~~t~~~~k~~~-----l~lga~~v~~~~~~~~------------------  400 (795)
T 3slk_A          346 GESLLVHSAAGGVGMAAIQLARHL--GAEVYATASEDKWQA-----VELSREHLASSRTCDF------------------  400 (795)
T ss_dssp             TCCEEEESTTBHHHHHHHHHHHHT--TCCEEEECCGGGGGG-----SCSCGGGEECSSSSTH------------------
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHc--CCEEEEEeChHHhhh-----hhcChhheeecCChhH------------------
Confidence            368999999999999999999987  457888663332221     1255555543222111                  


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA  198 (353)
                       .+.+.++.....+|+|+++..| .-+.-.+.+++.|=++...
T Consensus       401 -~~~i~~~t~g~GvDvVld~~gg-~~~~~~l~~l~~~Gr~v~i  441 (795)
T 3slk_A          401 -EQQFLGATGGRGVDVVLNSLAG-EFADASLRMLPRGGRFLEL  441 (795)
T ss_dssp             -HHHHHHHSCSSCCSEEEECCCT-TTTHHHHTSCTTCEEEEEC
T ss_pred             -HHHHHHHcCCCCeEEEEECCCc-HHHHHHHHHhcCCCEEEEe
Confidence             1222333333468889988765 5566666666666554443

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=87.55  E-value=0.77  Score=38.48  Aligned_cols=107  Identities=10%  Similarity=0.131  Sum_probs=60.1

Q ss_pred             CCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           75 GPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        75 ~~k~I~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      .|++|+|+|++   |++|...++-+.+.  .|+|....-..-           . +-  +.                 +.
T Consensus        12 ~p~~IavIGas~~~g~~G~~~~~~L~~~--G~~v~~vnp~~~-----------g-~~--i~-----------------G~   58 (145)
T 2duw_A           12 STRTIALVGASDKPDRPSYRVMKYLLDQ--GYHVIPVSPKVA-----------G-KT--LL-----------------GQ   58 (145)
T ss_dssp             HCCCEEEESCCSCTTSHHHHHHHHHHHH--TCCEEEECSSST-----------T-SE--ET-----------------TE
T ss_pred             CCCEEEEECcCCCCCChHHHHHHHHHHC--CCEEEEeCCccc-----------c-cc--cC-----------------Ce
Confidence            47899999998   89999988887765  365544322110           0 00  00                 01


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il  222 (353)
                      +++.   .+.++.  .++|+|+..+...+-..-...+++.|.+-.+-+.-+.   =.-+.+.|+++|.+++
T Consensus        59 ~~~~---sl~el~--~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~~~~---~~~l~~~a~~~Gi~~i  121 (145)
T 2duw_A           59 QGYA---TLADVP--EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQLGVI---NEQAAVLAREAGLSVV  121 (145)
T ss_dssp             ECCS---STTTCS--SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCTTCC---CHHHHHHHHTTTCEEE
T ss_pred             eccC---CHHHcC--CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCChH---HHHHHHHHHHcCCEEE
Confidence            1111   112222  2588999888753333334457777755444443222   2334566778888888

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=87.54  E-value=1.3  Score=44.96  Aligned_cols=33  Identities=27%  Similarity=0.401  Sum_probs=28.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .|+|.|.|+||.||....+-+.+.  .++|+++.-
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r   43 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADN   43 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEC
Confidence            468999999999999999988875  578998863

>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*

Probab=87.53  E-value=0.33  Score=45.51  Aligned_cols=125  Identities=11%  Similarity=0.221  Sum_probs=73.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ..||++.| ||.||+..++-   +  .|+++++..    ++    +.++.+                         .+..
T Consensus        12 ~~rV~i~G-~GaIG~~v~~~---~--~leLv~v~~----~k----~gelgv-------------------------~a~~   52 (253)
T 1j5p_A           12 HMTVLIIG-MGNIGKKLVEL---G--NFEKIYAYD----RI----SKDIPG-------------------------VVRL   52 (253)
T ss_dssp             CCEEEEEC-CSHHHHHHHHH---S--CCSEEEEEC----SS----CCCCSS-------------------------SEEC
T ss_pred             cceEEEEC-cCHHHHHHHhc---C--CcEEEEEEe----cc----ccccCc-------------------------eeeC
Confidence            45788887 89999998776   3  799999876    11    112211                         1111


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHH-HHHHHHcCCcEeeecccceeecc--cchhHHhhhcCCeEe-ecCCchhHH
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKP-TVAAIEAGKDIALANKETLIAGG--PFVLPLAHKHNIKIL-PADSEHSAI  231 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~p-T~~Ai~~gK~IaLANKESLV~aG--~li~~~a~~~~~~Il-PVDSEHsAI  231 (353)
                         .+.++. . ++|+||-+- +...+.. ....|++|+++...-=..|.-..  +-+.++|+++|.+|+ |-=    ||
T Consensus        53 ---d~d~ll-a-~pD~VVe~A-~~~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSG----Ai  122 (253)
T 1j5p_A           53 ---DEFQVP-S-DVSTVVECA-SPEAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSG----AI  122 (253)
T ss_dssp             ---SSCCCC-T-TCCEEEECS-CHHHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCT----TC
T ss_pred             ---CHHHHh-h-CCCEEEECC-CHHHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCC----cc
Confidence               122233 2 688888875 5556665 77788888888654411111000  345667888898883 421    22


Q ss_pred             H--HhhcCCCCCCcceEEEEe
Q 018600          232 F--QCIQGLPEGALRRIILTA  250 (353)
Q Consensus       232 f--Q~L~g~~~~~v~kIiLTA  250 (353)
                      .  +.|.--. ..|+++.+|.
T Consensus       123 ~GlD~l~aa~-g~l~~V~~~t  142 (253)
T 1j5p_A          123 GGLDVLSSIK-DFVKNVRIET  142 (253)
T ss_dssp             CCHHHHHHHG-GGEEEEEEEE
T ss_pred             cchhHHHHhc-CCccEEEEEE
Confidence            2  3332122 5789999983

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=87.48  E-value=3.6  Score=35.43  Aligned_cols=58  Identities=14%  Similarity=0.239  Sum_probs=38.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIK  141 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~  141 (353)
                      +|+|+|+ |.+|++..+.+.+.  .++|+.+.  +|-+.+.+..+++.. .+...|....+.|+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~--g~~v~vid--~~~~~~~~l~~~~~~-~~i~gd~~~~~~l~   59 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSR--KYGVVIIN--KDRELCEEFAKKLKA-TIIHGDGSHKEILR   59 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHT--TCCEEEEE--SCHHHHHHHHHHSSS-EEEESCTTSHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhC--CCeEEEEE--CCHHHHHHHHHHcCC-eEEEcCCCCHHHHH
Confidence            6999996 99999999999876  45566554  677776665555543 34445544433333

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=87.46  E-value=0.49  Score=41.78  Aligned_cols=32  Identities=19%  Similarity=0.296  Sum_probs=27.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +|+|.|.| ||+||+..++-+.+.  .++|++++-
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~--g~~V~~~~r   34 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQ--GHEVTGLRR   34 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHT--TCCEEEEEC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHC--CCEEEEEeC
Confidence            56899999 699999999998875  578998864

>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}

Probab=87.36  E-value=4.1  Score=36.96  Aligned_cols=129  Identities=20%  Similarity=0.252  Sum_probs=74.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhC---CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc------hHHHHHHhhc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEH---EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL------LDEIKEALAN  146 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~---pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~------~~~l~~~l~~  146 (353)
                      |+||+||.|.+  |++.-.++...   .-..+|+++..++--....+.|++++-.+.++...+.      -.++.+.+..
T Consensus         2 m~riavl~Sg~--Gsnl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~   79 (211)
T 3p9x_A            2 MKRVAIFASGS--GTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKE   79 (211)
T ss_dssp             -CEEEEECCTT--CHHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred             CCEEEEEEeCC--chHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHHh
Confidence            68999998865  77777777643   2247999998875334556778888876665543221      1233333433


Q ss_pred             CCCCcEEEecH-----HHHHHHhcCCCCcEEEEe----ccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          147 VEEKPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       147 ~~~~~~v~~G~-----~gl~~~a~~~~~D~Vv~A----IvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      .+.+.-|+.|-     +.+.+....    -++|-    +..+-|..|...|+.+|-+     +-..+.+  +=.|++|.+
T Consensus        80 ~~~Dliv~agy~~Il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  153 (211)
T 3p9x_A           80 KQIDFVVLAGYMRLVGPTLLGAYEG----RIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEG--MDTGPIIAQ  153 (211)
T ss_dssp             TTCCEEEESSCCSCCCHHHHHHHTT----SEEEEESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCSS--SSCSCEEEE
T ss_pred             cCCCEEEEeCchhhcCHHHHhhccC----CeEEECCccCCCCCCccHHHHHHHcCCCeEEEEEEEEcCC--CCCCCEEEE
Confidence            33344444443     233333322    12331    3556789999999999854     3344432  456777744

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=87.31  E-value=0.61  Score=43.33  Aligned_cols=77  Identities=16%  Similarity=0.201  Sum_probs=49.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .-.+|.|.|++|.||..++.+.+... ..+|++.....+.    +.++ +..+.+.-.+++..+++++            
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~~~~~~----~~~~-~ga~~~~~~~~~~~~~~~~------------  203 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTASTFKH----EAIK-DSVTHLFDRNADYVQEVKR------------  203 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEECGGGH----HHHG-GGSSEEEETTSCHHHHHHH------------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeCCHHHH----HHHH-cCCcEEEcCCccHHHHHHH------------
Confidence            34689999999999999999988653 4678887633232    2344 6677765533332333332            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccC
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVG  178 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG  178 (353)
                              +. ...+|+|+++..|
T Consensus       204 --------~~-~~g~Dvv~d~~g~  218 (349)
T 4a27_A          204 --------IS-AEGVDIVLDCLCG  218 (349)
T ss_dssp             --------HC-TTCEEEEEEECC-
T ss_pred             --------hc-CCCceEEEECCCc
Confidence                    22 2368999998644

>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*

Probab=87.28  E-value=3.9  Score=36.76  Aligned_cols=130  Identities=18%  Similarity=0.211  Sum_probs=72.6

Q ss_pred             eeEEEEecC-ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc------hHHHHHHhhcCCC
Q 018600           77 KPISVLGST-GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL------LDEIKEALANVEE  149 (353)
Q Consensus        77 k~I~ILGST-GSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~------~~~l~~~l~~~~~  149 (353)
                      +||+||+|. ||--+..++-+++..-+++|+++..++.-....+.|++++-.+..+...+.      -.++.+.+...+.
T Consensus         1 ~ri~vl~Sg~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~   80 (212)
T 1jkx_A            1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP   80 (212)
T ss_dssp             CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGCC
T ss_pred             CEEEEEEECCcHHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHhcCC
Confidence            479999886 444444445444443358999998876434456778888876665432221      1234444444344


Q ss_pred             CcEEEecH-----HHHHHHhcCCCCcEEEE----eccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          150 KPEILAGE-----QGVIEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       150 ~~~v~~G~-----~gl~~~a~~~~~D~Vv~----AIvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      +.-|+.|-     +.+.+....    -++|    -+.-+-|..|...|+.+|.+     +-..+.+  +=+|+++.+
T Consensus        81 Dliv~agy~~il~~~~l~~~~~----~~iNiHpSlLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  151 (212)
T 1jkx_A           81 DVVVLAGFMRILSPAFVSHYAG----RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDE--LDGGPVILQ  151 (212)
T ss_dssp             SEEEESSCCSCCCHHHHHHTTT----SEEEEESSCTTSCCSSCHHHHHHHTTCSEEEEEEEECCSS--TTCSCEEEE
T ss_pred             CEEEEeChhhhCCHHHHhhccC----CEEEEccCcccCCCCccHHHHHHHcCCCceEEEEEEEccc--ccCCCEEEE
Confidence            44455443     233333322    1332    23557788999999999854     2333322  345677643

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=87.27  E-value=4.9  Score=37.29  Aligned_cols=59  Identities=20%  Similarity=0.239  Sum_probs=45.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----------------CCHHHHHHHHHhhCCCEEEEeCccc
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----------------SNITLLADQVKRFKPQVVAVRNESL  136 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----------------sNv~lL~~Q~~eFkPk~V~i~de~~  136 (353)
                      .+++|.|+|+ |.+|.....-+++.  .++|+++...                 .|.+.|.+.+++.+++.|....+..
T Consensus        10 ~~~~ili~g~-g~~~~~~~~a~~~~--G~~v~~~~~~~~~~~~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~~   85 (391)
T 1kjq_A           10 AATRVMLLGS-GELGKEVAIECQRL--GVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAI   85 (391)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTT--TCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCEEEEEECCCCCchhhhccceEECCCCCHHHHHHHHHHcCCCEEEECCCcC
Confidence            3578999998 67788877777764  6788887653                 4677899999999999998866543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=87.23  E-value=0.43  Score=43.55  Aligned_cols=34  Identities=18%  Similarity=0.304  Sum_probs=27.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG  111 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag  111 (353)
                      |+|.|.|+||+||...++-+.+.. .++|+++.-.
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~   80 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNL   80 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTT-CCCEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CcEEEEEecC
Confidence            679999999999999999888752 2788887643

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=87.11  E-value=3.2  Score=39.44  Aligned_cols=47  Identities=26%  Similarity=0.353  Sum_probs=34.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ  127 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk  127 (353)
                      +++|.|+|+ |-||..+...++.+  ..+|++.  .++-+.+.+..+.+..+
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~--Ga~V~~~--d~~~~~~~~~~~~~g~~  212 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGM--GAQVTIL--DVNHKRLQYLDDVFGGR  212 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHTTTS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEE--ECCHHHHHHHHHhcCce
Confidence            478999999 99999999999987  4577664  45666665444446544

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=87.04  E-value=3.3  Score=37.85  Aligned_cols=79  Identities=16%  Similarity=0.099  Sum_probs=52.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |++.|-|+++-||..+..-+.+.  ..+|+..  .+|-+.+.+.+++. ++...+ .|-...+..++...          
T Consensus         3 K~vlVTGas~GIG~aia~~la~~--Ga~V~~~--~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~v~----------   67 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEA--GDKVCFI--DIDEKRSADFAKER-PNLFYFHGDVADPLTLKKFVE----------   67 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHTTC-TTEEEEECCTTSHHHHHHHHH----------
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC--CCEEEEE--eCCHHHHHHHHHhc-CCEEEEEecCCCHHHHHHHHH----------
Confidence            78999999999999999888875  6777664  46778887766664 555543 45444555554331          


Q ss_pred             cHHHHHHHhcCCCCcEEEEe
Q 018600          156 GEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~A  175 (353)
                        +- .  .+...+|++||-
T Consensus        68 --~~-~--~~~g~iDiLVNN   82 (247)
T 3ged_A           68 --YA-M--EKLQRIDVLVNN   82 (247)
T ss_dssp             --HH-H--HHHSCCCEEEEC
T ss_pred             --HH-H--HHcCCCCEEEEC
Confidence              11 1  223468999985

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=87.00  E-value=1.9  Score=37.90  Aligned_cols=77  Identities=16%  Similarity=0.065  Sum_probs=46.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+.- + .+.+.   +++..+...+ .|-...+.++..+.         
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r-~-~~~~~---~~~~~~~~~~~~D~~~~~~v~~~~~---------   72 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDI-R-GEDVV---ADLGDRARFAAADVTDEAAVASALD---------   72 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEES-S-CHHHH---HHTCTTEEEEECCTTCHHHHHHHHH---------
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeC-c-hHHHH---HhcCCceEEEECCCCCHHHHHHHHH---------
Confidence            367999999999999999888775  577877643 3 33333   3334444443 34444444444321         


Q ss_pred             ecHHHHHHHhcCCCCcEEEEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                             ++.+...+|++|+.
T Consensus        73 -------~~~~~g~id~lv~n   86 (257)
T 3tl3_A           73 -------LAETMGTLRIVVNC   86 (257)
T ss_dssp             -------HHHHHSCEEEEEEC
T ss_pred             -------HHHHhCCCCEEEEC
Confidence                   11123468888886

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=86.66  E-value=1.3  Score=40.91  Aligned_cols=92  Identities=10%  Similarity=0.061  Sum_probs=55.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhC-CCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEH-EDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~-pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .-.+|.|+|+ |.||..++.+.+.. |. .+|++...  +-+++ +.++++..+.+.-.++     ..+           
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~G-a~Vi~~~~--~~~~~-~~~~~lGa~~vi~~~~-----~~~-----------  228 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKN-ITIVGISR--SKKHR-DFALELGADYVSEMKD-----AES-----------  228 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTT-CEEEEECS--CHHHH-HHHHHHTCSEEECHHH-----HHH-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCC-CEEEEEeC--CHHHH-HHHHHhCCCEEecccc-----chH-----------
Confidence            4468999999 99999999999875 22 57877653  33443 4567788777642111     000           


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                           -+.++.....+|+|++++.+-..+...+.+++.|
T Consensus       229 -----~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~  262 (344)
T 2h6e_A          229 -----LINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE  262 (344)
T ss_dssp             -----HHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE
T ss_pred             -----HHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC
Confidence                 1122222236999999976543555555554443

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=86.64  E-value=2.4  Score=37.54  Aligned_cols=65  Identities=15%  Similarity=0.130  Sum_probs=41.1

Q ss_pred             CeeEEEEec--CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEE-EeCccchHHHHHH
Q 018600           76 PKPISVLGS--TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVA-VRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGS--TGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~-i~de~~~~~l~~~  143 (353)
                      .|++.|.|+  ||.||..+..-+.+.  .++|+.+. ++.-+.+.+..+++..+... ..|-...+.+++.
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTG-FDRLRLIQRITDRLPAKAPLLELDVQNEEHLASL   74 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEE-CSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEe-cChHHHHHHHHHhcCCCceEEEccCCCHHHHHHH
Confidence            367999999  999999999988876  57777653 33333345555555443322 2454444444443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=86.62  E-value=4.2  Score=37.76  Aligned_cols=80  Identities=18%  Similarity=0.199  Sum_probs=57.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |.+.|-|+++=||..+-.-+.+.  ..+|+..  .+|-+.|.+.++++..+...+ .|-...+.+++...          
T Consensus        30 KvalVTGas~GIG~aiA~~la~~--Ga~V~i~--~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~----------   95 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAE--GARVFIT--GRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYE----------   95 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHH----------
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHH----------
Confidence            67899999999999999998876  6777653  478899999999998777665 45555555554332          


Q ss_pred             cHHHHHHHhcCCCCcEEEEe
Q 018600          156 GEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~A  175 (353)
                         .+.  .+...+|++||-
T Consensus        96 ---~~~--~~~G~iDiLVNN  110 (273)
T 4fgs_A           96 ---KVK--AEAGRIDVLFVN  110 (273)
T ss_dssp             ---HHH--HHHSCEEEEEEC
T ss_pred             ---HHH--HHcCCCCEEEEC
Confidence               111  123468888876

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=86.60  E-value=1.9  Score=39.40  Aligned_cols=52  Identities=12%  Similarity=0.147  Sum_probs=40.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~  132 (353)
                      .-.+|.|.|++|.||..++.+.+..  ..+|++.+  + -+. .+.++++..+.+.-.
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~--~-~~~-~~~~~~lGa~~~i~~  203 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA--S-KRN-HAFLKALGAEQCINY  203 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--C-HHH-HHHHHHHTCSEEEET
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe--c-cch-HHHHHHcCCCEEEeC
Confidence            3468999999999999999999987  46888875  2 234 567888998876543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=86.58  E-value=3  Score=36.46  Aligned_cols=33  Identities=24%  Similarity=0.216  Sum_probs=27.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+++.-
T Consensus         7 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r   39 (250)
T 2fwm_X            7 GKNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQ   39 (250)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeC
Confidence            368999999999999999988875  578887653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=86.52  E-value=3  Score=41.87  Aligned_cols=66  Identities=18%  Similarity=0.245  Sum_probs=44.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-----CHHHHHHHHHhhCCCEEEE-eCccchHHHHHHh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-----NITLLADQVKRFKPQVVAV-RNESLLDEIKEAL  144 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-----Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l  144 (353)
                      +.+.|.|+||.||..+..-+.++  ..+.+.|..++     ..+.+.+++++...+..++ .|-...+.+++.+
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~--Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~  311 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQ--GAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALL  311 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEECCCCchHHHHHHHHHHC--CCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            78999999999999999888775  45344555553     3556666666666665554 3545455555544

>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*

Probab=86.49  E-value=0.48  Score=43.12  Aligned_cols=75  Identities=16%  Similarity=0.245  Sum_probs=52.9

Q ss_pred             CCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-------cC-C--------HHHHHHHHHhhCCCEEEEeCc
Q 018600           71 KTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-------GS-N--------ITLLADQVKRFKPQVVAVRNE  134 (353)
Q Consensus        71 ~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-------gs-N--------v~lL~~Q~~eFkPk~V~i~de  134 (353)
                      -.++..++++|+|+ |..|++.+.-+.....+|+++|+--       |+ .        .+.|.+.+++.+++.+.++-+
T Consensus        79 Lg~~~~~~V~IvGa-G~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvP  157 (212)
T 3keo_A           79 LNDHSTTNVMLVGC-GNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVP  157 (212)
T ss_dssp             TTTTSCEEEEEECC-SHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSC
T ss_pred             hCCCCCCEEEEECc-CHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecC
Confidence            34677789999999 9999998776433346899999842       22 1        357888888899999999866


Q ss_pred             cch-HHHHHHhhc
Q 018600          135 SLL-DEIKEALAN  146 (353)
Q Consensus       135 ~~~-~~l~~~l~~  146 (353)
                      +.. .+..+.+..
T Consensus       158 s~~aq~v~d~lv~  170 (212)
T 3keo_A          158 STEAQEVADILVK  170 (212)
T ss_dssp             GGGHHHHHHHHHH
T ss_pred             chhHHHHHHHHHH
Confidence            543 445554443

>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A

Probab=86.48  E-value=1.5  Score=43.34  Aligned_cols=108  Identities=16%  Similarity=0.151  Sum_probs=64.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHhh--CCC---EEEEeCccchHHHHHHhhcCCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKRF--KPQ---VVAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaagsNv~lL~~Q~~eF--kPk---~V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      .||+|.|. |-||+..++.+.++. .+|+|+++.-..+.+.++...+--  ..+   -|...+..        +.-.+..
T Consensus         3 ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~--------l~v~g~~   73 (380)
T 2d2i_A            3 IRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENS--------ITVNGKT   73 (380)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTE--------EEETTEE
T ss_pred             cEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCe--------EEECCeE
Confidence            58999999 999999999998883 469999998766777665554311  111   11111110        0000111


Q ss_pred             cEEEecHHHHHHHh-cCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          151 PEILAGEQGVIEAA-RHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       151 ~~v~~G~~gl~~~a-~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                      +.++.- ....++. ...++|+|+.+...+...+-.-..+++|.+
T Consensus        74 i~v~~~-~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGak  117 (380)
T 2d2i_A           74 MKIVCD-RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAK  117 (380)
T ss_dssp             EEEECC-SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCS
T ss_pred             EEEEec-CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCc
Confidence            222211 1111110 012689999998878877777788899955

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=86.46  E-value=2.1  Score=40.38  Aligned_cols=46  Identities=17%  Similarity=0.095  Sum_probs=33.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQ  127 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk  127 (353)
                      -.+|.|.|+ |.||..++.+.+..  .. +|++..  ++-+++ +.++++..+
T Consensus       186 g~~VlV~Ga-G~vG~~aiqlAk~~--Ga~~Vi~~~--~~~~~~-~~a~~lGa~  232 (398)
T 1kol_A          186 GSTVYVAGA-GPVGLAAAASARLL--GAAVVIVGD--LNPARL-AHAKAQGFE  232 (398)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEEE--SCHHHH-HHHHHTTCE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHC--CCCeEEEEc--CCHHHH-HHHHHcCCc
Confidence            468999995 99999999999986  45 566654  333443 456888876

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=86.42  E-value=7.5  Score=38.17  Aligned_cols=64  Identities=17%  Similarity=0.203  Sum_probs=46.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      .|.+.|.|+||-||..+..-+.+.  ..+|+.+.-....+.+.+...+.+..++. .|-...+.++.
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~-~Dvtd~~~v~~  276 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVADKVGGTALT-LDVTADDAVDK  276 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHHHTCEEEE-CCTTSTTHHHH
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEE-EecCCHHHHHH
Confidence            478999999999999999998876  67888776555677888888887765443 34443444443

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=86.42  E-value=2  Score=39.81  Aligned_cols=46  Identities=9%  Similarity=0.031  Sum_probs=34.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|.+.|.|+||.||..+..-+.+.  .++|+.+ +.+|.+.+.+..+++
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~--G~~Vv~~-~~r~~~~~~~~~~~l   91 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLH-YHRSAAEANALSATL   91 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEE-ESSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEE-cCCCHHHHHHHHHHH
Confidence            368999999999999999998876  5777764 335666666555443

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=86.26  E-value=0.95  Score=41.90  Aligned_cols=53  Identities=19%  Similarity=0.295  Sum_probs=38.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      ..++|.|.|++|.||..+....+... ..+|++..  +|-+++ +.++++..+.++-
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~--~~~~~~-~~~~~~g~~~~~~  222 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVD--VREEAV-EAAKRAGADYVIN  222 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEE--SSHHHH-HHHHHHTCSEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEc--CCHHHH-HHHHHhCCCEEec
Confidence            34789999999999999999998752 35777654  344444 4557787776653

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=86.24  E-value=0.88  Score=42.44  Aligned_cols=49  Identities=14%  Similarity=0.188  Sum_probs=36.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V~i  131 (353)
                      -++|.|+|+ |.||..++.+.+..  ..+|++..... +.+    .++++..+.++-
T Consensus       180 g~~VlV~Ga-G~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~----~~~~lGa~~v~~  229 (360)
T 1piw_A          180 GKKVGIVGL-GGIGSMGTLISKAM--GAETYVISRSSRKRE----DAMKMGADHYIA  229 (360)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESSSTTHH----HHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEcCCHHHHH----HHHHcCCCEEEc
Confidence            468999999 99999999999976  46788876433 333    345677777653

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=86.22  E-value=0.55  Score=41.40  Aligned_cols=34  Identities=18%  Similarity=0.279  Sum_probs=27.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      +|.|.|+||+||...++-+.+.. .++|+++.-..
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~   34 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLK   34 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTT-CCCEEEEECCS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCC-CcEEEEEccCC
Confidence            58999999999999999888752 27888886433

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=86.22  E-value=0.54  Score=41.59  Aligned_cols=32  Identities=19%  Similarity=0.166  Sum_probs=27.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|+|.|.|+||.||..+.+-+.+.  .++|+++.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~   34 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPM--AEILRLAD   34 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEe
Confidence            578999999999999998888765  57787765

>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}

Probab=86.18  E-value=3.3  Score=37.45  Aligned_cols=132  Identities=16%  Similarity=0.131  Sum_probs=73.9

Q ss_pred             CCeeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCcc-----ch-HHHHHHhhcC
Q 018600           75 GPKPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-----LL-DEIKEALANV  147 (353)
Q Consensus        75 ~~k~I~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~-----~~-~~l~~~l~~~  147 (353)
                      .++||+||-| +||--...++-+++..-.++|+++..++--..-.+.|+++.-.+..+...+     .+ .++.+.+...
T Consensus         6 ~~~ri~vl~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~   85 (209)
T 4ds3_A            6 KRNRVVIFISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFASKEAHEDAILAALDVL   85 (209)
T ss_dssp             CCEEEEEEESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHH
T ss_pred             CCccEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHHhc
Confidence            4578999876 455555555555443335899999886522222467888887666654211     11 2333444333


Q ss_pred             CCCcEEEecH-----HHHHHHhcCCCCcEEEEe----ccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          148 EEKPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       148 ~~~~~v~~G~-----~gl~~~a~~~~~D~Vv~A----IvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      +.+.-|+.|-     +.+.+....    -++|-    +.-+-|..|...|+.+|.+     +-..+.+  +=.|++|.+
T Consensus        86 ~~Dliv~agy~~il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  158 (209)
T 4ds3_A           86 KPDIICLAGYMRLLSGRFIAPYEG----RILNIHPSLLPLFPGLHTHQRALDAGMKLAGCTVHLVTEG--MDEGPILAQ  158 (209)
T ss_dssp             CCSEEEESSCCSCCCHHHHGGGTT----CEEEEESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCC----CCCCEEEE
T ss_pred             CCCEEEEeccccCcCHHHHhhccC----CeEEECCccccCCCChhHHHHHHHcCCCeEEEEEEEEcCC--CCCCCeEEE
Confidence            3444455553     233332221    23332    4567899999999999964     3444544  557888744

>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*

Probab=86.02  E-value=1.2  Score=40.18  Aligned_cols=91  Identities=12%  Similarity=0.061  Sum_probs=61.2

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      ++..++++|+|+ |.+|.+.++.+.... .|+++|+.-. |-++.-        +.               .    .+..
T Consensus        77 ~~~~~rV~IIGa-G~~G~~la~~~~~~~-g~~iVg~~D~-dp~k~g--------~~---------------i----~gv~  126 (211)
T 2dt5_A           77 LNRKWGLCIVGM-GRLGSALADYPGFGE-SFELRGFFDV-DPEKVG--------RP---------------V----RGGV  126 (211)
T ss_dssp             TTSCEEEEEECC-SHHHHHHHHCSCCCS-SEEEEEEEES-CTTTTT--------CE---------------E----TTEE
T ss_pred             cCCCCEEEEECc-cHHHHHHHHhHhhcC-CcEEEEEEeC-CHHHHh--------hh---------------h----cCCe
Confidence            455678999996 899999888644445 8999997642 111110        00               0    1234


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                      |+ +.+.+.++++. ++|.|+-|+...+.-+-...++++|++.
T Consensus       127 V~-~~~dl~ell~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~  167 (211)
T 2dt5_A          127 IE-HVDLLPQRVPG-RIEIALLTVPREAAQKAADLLVAAGIKG  167 (211)
T ss_dssp             EE-EGGGHHHHSTT-TCCEEEECSCHHHHHHHHHHHHHHTCCE
T ss_pred             ee-cHHhHHHHHHc-CCCEEEEeCCchhHHHHHHHHHHcCCCE
Confidence            55 46678888888 9999999987766556666777788663

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=85.98  E-value=2.1  Score=37.19  Aligned_cols=42  Identities=29%  Similarity=0.326  Sum_probs=32.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK  122 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~  122 (353)
                      .|++.|.|+||.||..+..-+.+   .++|+++.  +|.+.+.+.++
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~---g~~v~~~~--r~~~~~~~~~~   46 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR---DHIVYALG--RNPEHLAALAE   46 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT---TSEEEEEE--SCHHHHHHHHT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC---CCeEEEEe--CCHHHHHHHHh
Confidence            46799999999999999888765   46777654  67777766655

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=85.82  E-value=1.1  Score=41.70  Aligned_cols=88  Identities=13%  Similarity=0.196  Sum_probs=56.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -.+|.|+|+ |.||..++.+.+..  ..+|++.....  +++....+++..+.+.-.++  .+.                
T Consensus       181 g~~VlV~Ga-G~vG~~a~qlak~~--Ga~Vi~~~~~~--~~~~~~~~~lGa~~vi~~~~--~~~----------------  237 (357)
T 2cf5_A          181 GLRGGILGL-GGVGHMGVKIAKAM--GHHVTVISSSN--KKREEALQDLGADDYVIGSD--QAK----------------  237 (357)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHH--TCEEEEEESST--THHHHHHTTSCCSCEEETTC--HHH----------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCeEEEEeCCh--HHHHHHHHHcCCceeecccc--HHH----------------
Confidence            357999996 99999999999976  46788876443  33333233788777653321  111                


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                          +.++.  ..+|+|+++..+-..+...+.+++.|
T Consensus       238 ----~~~~~--~g~D~vid~~g~~~~~~~~~~~l~~~  268 (357)
T 2cf5_A          238 ----MSELA--DSLDYVIDTVPVHHALEPYLSLLKLD  268 (357)
T ss_dssp             ----HHHST--TTEEEEEECCCSCCCSHHHHTTEEEE
T ss_pred             ----HHHhc--CCCCEEEECCCChHHHHHHHHHhccC
Confidence                12221  25899999976655676666555443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=85.67  E-value=1.4  Score=41.50  Aligned_cols=86  Identities=14%  Similarity=0.202  Sum_probs=54.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -.+|.|+|+ |.||..++.+.+..  ..+|+++....  ++ .+.++++..+.++-.++.  + .               
T Consensus       195 g~~VlV~Ga-G~vG~~aiqlak~~--Ga~Vi~~~~~~--~~-~~~a~~lGa~~vi~~~~~--~-~---------------  250 (369)
T 1uuf_A          195 GKKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSE--AK-REAAKALGADEVVNSRNA--D-E---------------  250 (369)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSG--GG-HHHHHHHTCSEEEETTCH--H-H---------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEeCCH--HH-HHHHHHcCCcEEeccccH--H-H---------------
Confidence            358999998 89999999999986  56788876432  22 234556777766532211  0 0               


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                          +.++.  ..+|+|+++..+-..+.-.+.+++.
T Consensus       251 ----~~~~~--~g~Dvvid~~g~~~~~~~~~~~l~~  280 (369)
T 1uuf_A          251 ----MAAHL--KSFDFILNTVAAPHNLDDFTTLLKR  280 (369)
T ss_dssp             ----HHTTT--TCEEEEEECCSSCCCHHHHHTTEEE
T ss_pred             ----HHHhh--cCCCEEEECCCCHHHHHHHHHHhcc
Confidence                11111  3699999998765556555544433

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=85.66  E-value=2.5  Score=38.19  Aligned_cols=46  Identities=9%  Similarity=0.031  Sum_probs=34.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||-||..+..-+.+.  .++|+.+ +++|.+.+.+.+++.
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~-~~r~~~~~~~~~~~l   54 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLH-YHRSAAEANALSATL   54 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEE-ESSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC--CCeEEEE-cCCCHHHHHHHHHHH
Confidence            367999999999999999998876  5777764 335666666555443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=85.65  E-value=4  Score=39.06  Aligned_cols=47  Identities=26%  Similarity=0.340  Sum_probs=34.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ  127 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk  127 (353)
                      +++|.|+|+ |.||.++...++.+  ..+|++.  .++-+.+....+.+..+
T Consensus       168 g~~V~ViG~-G~iG~~~a~~a~~~--Ga~V~~~--d~~~~~l~~~~~~~g~~  214 (377)
T 2vhw_A          168 PADVVVIGA-GTAGYNAARIANGM--GATVTVL--DINIDKLRQLDAEFCGR  214 (377)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHTTTS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEEEE--eCCHHHHHHHHHhcCCe
Confidence            478999998 99999999999987  4577654  45666665444446544

>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0

Probab=85.64  E-value=4.8  Score=36.52  Aligned_cols=131  Identities=15%  Similarity=0.227  Sum_probs=75.2

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCC---ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc-hHHHHHHhhcCCC
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHED---KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEE  149 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd---~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~-~~~l~~~l~~~~~  149 (353)
                      +.++||+||-|-.  |++..+++....+   .++|+++..++--..-.+.|+++.-.+..+...+. -.++.+.+...+.
T Consensus         6 ~~~~ri~vl~SG~--gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~   83 (215)
T 3kcq_A            6 KKELRVGVLISGR--GSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLDIEHISTVLREHDV   83 (215)
T ss_dssp             -CCEEEEEEESSC--CHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBCHHHHHHHHHHTTC
T ss_pred             CCCCEEEEEEECC--cHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCChHHHHHHHHHhCC
Confidence            4567999987743  5555555554432   48999998864222234668888866665432211 1334444443334


Q ss_pred             CcEEEecH-----HHHHHHhcCCCCcEEEEe----ccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          150 KPEILAGE-----QGVIEAARHPDAVTVVTG----IVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       150 ~~~v~~G~-----~gl~~~a~~~~~D~Vv~A----IvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      +.-|+.|-     +.+.+....    -++|-    +..+-|..|...|+.+|-+     +-..+.+  +=.|++|.+
T Consensus        84 Dlivlagy~~IL~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--lD~G~Ii~Q  154 (215)
T 3kcq_A           84 DLVCLAGFMSILPEKFVTDWHH----KIINIHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQE--LDAGPIIMQ  154 (215)
T ss_dssp             SEEEESSCCSCCCHHHHHHTTT----SEEEEESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCSS--TTCSCEEEE
T ss_pred             CEEEEeCCceEeCHHHHhhccC----CeEEECcccccCCCCccHHHHHHHcCCCeEEEEEEEEcCC--CCCCCEEEE
Confidence            44555554     334433322    13332    4567899999999999853     4445544  567888854

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=85.63  E-value=1.7  Score=39.74  Aligned_cols=91  Identities=18%  Similarity=0.252  Sum_probs=59.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc-cchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de-~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|+|+ |++|..++..+++.- ..+|++.+.  +-+++ +.++++..+.+.-..+ +..+++++             
T Consensus       165 ~~VlV~Ga-G~~g~~a~~~a~~~~-g~~Vi~~~~--~~~r~-~~~~~~Ga~~~i~~~~~~~~~~v~~-------------  226 (348)
T 4eez_A          165 DWQVIFGA-GGLGNLAIQYAKNVF-GAKVIAVDI--NQDKL-NLAKKIGADVTINSGDVNPVDEIKK-------------  226 (348)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTS-CCEEEEEES--CHHHH-HHHHHTTCSEEEEC-CCCHHHHHHH-------------
T ss_pred             CEEEEEcC-CCccHHHHHHHHHhC-CCEEEEEEC--cHHHh-hhhhhcCCeEEEeCCCCCHHHHhhh-------------
Confidence            57999997 889999998888653 467888764  33443 5678889888775433 32333333             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                             +.....+|.++....|-..+...+.+++.|
T Consensus       227 -------~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~  256 (348)
T 4eez_A          227 -------ITGGLGVQSAIVCAVARIAFEQAVASLKPM  256 (348)
T ss_dssp             -------HTTSSCEEEEEECCSCHHHHHHHHHTEEEE
T ss_pred             -------hcCCCCceEEEEeccCcchhheeheeecCC
Confidence                   333346788888877766555555554444

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=85.10  E-value=5  Score=35.41  Aligned_cols=45  Identities=18%  Similarity=0.386  Sum_probs=32.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      ++|+|+|+ |.+|+.....+.+.  .+++|.+. .+|-+.+.+..+++.
T Consensus        11 m~i~iiG~-G~mG~~~a~~l~~~--g~~~v~~~-~~~~~~~~~~~~~~g   55 (266)
T 3d1l_A           11 TPIVLIGA-GNLATNLAKALYRK--GFRIVQVY-SRTEESARELAQKVE   55 (266)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHH--TCCEEEEE-CSSHHHHHHHHHHTT
T ss_pred             CeEEEEcC-CHHHHHHHHHHHHC--CCeEEEEE-eCCHHHHHHHHHHcC
Confidence            47999996 99999998888876  36655543 456666665555543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=85.01  E-value=1.7  Score=38.68  Aligned_cols=32  Identities=19%  Similarity=0.214  Sum_probs=26.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|++.|.|+||-||..+.+-+.+.  .++|+.+.
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~   52 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADA--GDKVAITY   52 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence            368999999999999999988875  57777654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=84.86  E-value=4.2  Score=36.90  Aligned_cols=47  Identities=17%  Similarity=0.267  Sum_probs=32.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|++.|.|+||-||..+..-+.+.. ..++|+.+  .+|.+.+.+.+++.
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~--~r~~~~~~~~~~~l   80 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILA--ARRLEKLEELKKTI   80 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEE--ESCHHHHHHHHHHH
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEE--ECCHHHHHHHHHHH
Confidence            3689999999999999887765532 22466654  46666666555543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=84.58  E-value=1.2  Score=45.17  Aligned_cols=35  Identities=20%  Similarity=0.394  Sum_probs=29.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .+|+|.|.|+||+||...++-+.+.+ .++|+++.-
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~-g~~V~~~~r  348 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLRED-HYEVYGLDI  348 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSS-SEEEEEEES
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcC-CCEEEEEEc
Confidence            45789999999999999998887653 489999864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=84.17  E-value=0.44  Score=43.42  Aligned_cols=49  Identities=14%  Similarity=0.367  Sum_probs=37.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      +|.|.|+||.||..++++.+..  ..+|++.+...  ++ .+.++++..+.+.-
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~--~~-~~~~~~lGa~~vi~  197 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRE--ST-HGYLKSLGANRILS  197 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCG--GG-HHHHHHHTCSEEEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCH--HH-HHHHHhcCCCEEEe
Confidence            4999999999999999999986  46898877432  22 23456788887763

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=84.00  E-value=5.2  Score=37.92  Aligned_cols=44  Identities=23%  Similarity=0.377  Sum_probs=32.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      +++|.|+|+ |-+|..+...++...  .+|++.  .++-+++.+..+.+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~G--a~V~v~--dr~~~r~~~~~~~~  210 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLG--AQVQIF--DINVERLSYLETLF  210 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT--CEEEEE--ESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC--CEEEEE--eCCHHHHHHHHHhh
Confidence            379999999 999999999999874  466653  46666665444433

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=83.99  E-value=1.5  Score=41.01  Aligned_cols=33  Identities=24%  Similarity=0.246  Sum_probs=25.2

Q ss_pred             CCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEE
Q 018600           73 WDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVA  107 (353)
Q Consensus        73 ~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~Vva  107 (353)
                      ++...+++|.|+||..|+..++-+.++  .|++++
T Consensus        10 ~~~~~~v~V~Gasg~~G~~~~~~l~~~--g~~~V~   42 (294)
T 2yv1_A           10 LDENTKAIVQGITGRQGSFHTKKMLEC--GTKIVG   42 (294)
T ss_dssp             SCTTCCEEEETTTSHHHHHHHHHHHHT--TCCEEE
T ss_pred             hCCCCEEEEECCCCCHHHHHHHHHHhC--CCeEEE
Confidence            344457888899999999999988886  576553

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=83.97  E-value=4.9  Score=38.76  Aligned_cols=47  Identities=15%  Similarity=0.303  Sum_probs=36.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQ  127 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk  127 (353)
                      .++|.|+|+ |-||..+...++.+  .. +|++  ++++.+++.+.+++|..+
T Consensus       167 g~~VlIiGa-G~iG~~~a~~l~~~--G~~~V~v--~~r~~~ra~~la~~~g~~  214 (404)
T 1gpj_A          167 DKTVLVVGA-GEMGKTVAKSLVDR--GVRAVLV--ANRTYERAVELARDLGGE  214 (404)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHH--CCSEEEE--ECSSHHHHHHHHHHHTCE
T ss_pred             CCEEEEECh-HHHHHHHHHHHHHC--CCCEEEE--EeCCHHHHHHHHHHcCCc
Confidence            467999998 99999999999876  34 5543  467788877788888754

>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*

Probab=83.97  E-value=7.2  Score=34.99  Aligned_cols=130  Identities=16%  Similarity=0.186  Sum_probs=73.0

Q ss_pred             eeEEEEec-CChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc-----h-HHHHHHhhcCCC
Q 018600           77 KPISVLGS-TGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-----L-DEIKEALANVEE  149 (353)
Q Consensus        77 k~I~ILGS-TGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~-----~-~~l~~~l~~~~~  149 (353)
                      +||+||-| +||.-+..++-+++....++|+++..+..-..-.+.|++++-.+.++..++.     + .++.+.+...+.
T Consensus         1 ~riaVl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~   80 (209)
T 1meo_A            1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSI   80 (209)
T ss_dssp             CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred             CeEEEEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHhcCC
Confidence            47888876 4555555555555444469999998776444445678888877665543211     1 233344443334


Q ss_pred             CcEEEecH-----HHHHHHhcCCCCcEEEE----eccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          150 KPEILAGE-----QGVIEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       150 ~~~v~~G~-----~gl~~~a~~~~~D~Vv~----AIvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      +.-|+.|-     +.+.+....    -++|    -+.-+-|..|...|+.+|.+     +-..+.+  +=+|+++.+
T Consensus        81 Dliv~a~y~~il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  151 (209)
T 1meo_A           81 DIVCLAGFMRILSGPFVQKWNG----KMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAED--VDAGQIILQ  151 (209)
T ss_dssp             CEEEEESCCSCCCHHHHHHTTT----SEEEEESSSTTSSCSSCHHHHHHHHTCSEEEEEEEECCC-----CCCEEEE
T ss_pred             CEEEEcchhhhCCHHHHhhhcC----CEEEEccCcCcCCCCccHHHHHHHcCCCcEEEEEEEECCC--CcCCCEEEE
Confidence            44455553     334333321    1332    13567899999999999864     3344432  456777743

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=83.91  E-value=4.4  Score=35.96  Aligned_cols=33  Identities=21%  Similarity=0.320  Sum_probs=27.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .|++.|.|+||.||..+..-+.+.  .++|+++.-
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r   40 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSI   40 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEec
Confidence            368999999999999999988875  578887653

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=83.66  E-value=6.6  Score=37.30  Aligned_cols=58  Identities=26%  Similarity=0.313  Sum_probs=45.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeec-----------------CCHHHHHHHHHhhCCCEEEEeCccc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-----------------SNITLLADQVKRFKPQVVAVRNESL  136 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-----------------sNv~lL~~Q~~eFkPk~V~i~de~~  136 (353)
                      +++|.|+|+ |.+|.....-+++.  .++|+++...                 .|.+.|.+.+++.+++.|....+..
T Consensus        19 ~~~ili~g~-g~~g~~~~~a~~~~--G~~v~~v~~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~~e~~   93 (433)
T 2dwc_A           19 AQKILLLGS-GELGKEIAIEAQRL--GVEVVAVDRYANAPAMQVAHRSYVGNMMDKDFLWSVVEREKPDAIIPEIEAI   93 (433)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHT--TCEEEEEESSTTCHHHHHSSEEEESCTTCHHHHHHHHHHHCCSEEEECSSCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC--CCEEEEEECCCCChhhhhcceEEECCCCCHHHHHHHHHHcCCCEEEECcccC
Confidence            468999998 78888888777764  7888888654                 2567888999999999998866543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=83.65  E-value=1.2  Score=38.64  Aligned_cols=32  Identities=19%  Similarity=0.329  Sum_probs=27.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ||++.|.|+||.||..+..-+.+.  .++|+++.
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~   32 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGID   32 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEe
Confidence            578999999999999999988875  57787764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=83.59  E-value=1.6  Score=40.51  Aligned_cols=35  Identities=29%  Similarity=0.337  Sum_probs=26.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCC-----ceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHED-----KFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd-----~F~VvaLaa  110 (353)
                      ++||+|.|+||+||+....-+.+...     ..+|+.+--
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~   43 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI   43 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeC
Confidence            46899999999999999988876421     127777643

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=83.53  E-value=2.6  Score=42.36  Aligned_cols=39  Identities=15%  Similarity=0.199  Sum_probs=31.0

Q ss_pred             CCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe-ecC
Q 018600           72 TWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA-AGS  112 (353)
Q Consensus        72 ~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa-ags  112 (353)
                      .|...+.+.|.|+||-||..+..-+.+.  ..+++.|. .++
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~--G~~~vvl~~~R~  286 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARD--GAGHLLLHTTPS  286 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHH--TCCEEEEEECCC
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHc--CCCEEEEEeCCC
Confidence            4666789999999999999999888765  46666776 554

>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}

Probab=82.99  E-value=12  Score=33.45  Aligned_cols=131  Identities=17%  Similarity=0.174  Sum_probs=76.6

Q ss_pred             CeeEEEEe-cCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc------hHHHHHHhhcCC
Q 018600           76 PKPISVLG-STGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL------LDEIKEALANVE  148 (353)
Q Consensus        76 ~k~I~ILG-STGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~------~~~l~~~l~~~~  148 (353)
                      |+||+||. .||+-....|+-+.+..-.++|+++..++--....+.|++++-.+..+...+.      -.++.+.+...+
T Consensus         3 m~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~~~~   82 (212)
T 3av3_A            3 MKRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFESEILRELKGRQ   82 (212)
T ss_dssp             CEEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHHhcC
Confidence            67898884 36777777777776543368999998775333556778888877665543221      113334444333


Q ss_pred             CCcEEEecH-----HHHHHHhcCCCCcEEEE----eccCccCcHHHHHHHHcCCc-----EeeecccceeecccchhH
Q 018600          149 EKPEILAGE-----QGVIEAARHPDAVTVVT----GIVGCAGLKPTVAAIEAGKD-----IALANKETLIAGGPFVLP  212 (353)
Q Consensus       149 ~~~~v~~G~-----~gl~~~a~~~~~D~Vv~----AIvG~aGL~pT~~Ai~~gK~-----IaLANKESLV~aG~li~~  212 (353)
                      .+.-|+.|-     +.+.+....    -++|    -+.-+-|..|...|+.+|.+     +-..+.+  +=+|+++.+
T Consensus        83 ~Dliv~a~y~~il~~~~l~~~~~----~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~--~D~G~Ii~Q  154 (212)
T 3av3_A           83 IDWIALAGYMRLIGPTLLSAYEG----KIVNIHPSLLPAFPGKDAIGQAYRAGVSETGVTVHYVDEG--MDTGPVIAQ  154 (212)
T ss_dssp             CCEEEESSCCSCCCHHHHHHTTT----CEEEEESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCSS--SSCSCEEEE
T ss_pred             CCEEEEchhhhhCCHHHHhhhcC----CEEEEecCcCCCCCCcCHHHHHHHcCCCeEEEEEEEECCC--CCCCCEEEE
Confidence            444455553     233333321    1333    24567899999999999863     2233322  346777744

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=82.87  E-value=1.2  Score=42.04  Aligned_cols=35  Identities=14%  Similarity=0.144  Sum_probs=26.4

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .++||+|+|++|+||......+.+.+.-.+|+.+-
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~D   41 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYD   41 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEe
Confidence            45689999999999999988877654335666654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=82.87  E-value=2.8  Score=38.81  Aligned_cols=67  Identities=9%  Similarity=0.018  Sum_probs=39.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee-cCCHHHHHHHHHhh------CCCEEEE-eCccchHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-GSNITLLADQVKRF------KPQVVAV-RNESLLDEIKEAL  144 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-gsNv~lL~~Q~~eF------kPk~V~i-~de~~~~~l~~~l  144 (353)
                      .|++.|.|+||.||..+..-+.+..  ++|+.+.. ..+.+.+.+++++.      ..+..++ .|-...+.+++.+
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G--~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   76 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDP--SQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAAR   76 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCT--TCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC--CceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHH
Confidence            3689999999999999999988764  44444432 23444444444332      2343333 4544445555443

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=82.76  E-value=5.4  Score=36.49  Aligned_cols=54  Identities=15%  Similarity=0.221  Sum_probs=35.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE  134 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de  134 (353)
                      +++|+|+|++|.||......+++.  .++|....-.. -..+.+.++  ..++|+++-+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~-~~~~~~~~~--~aDvVilavp   74 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRAS--GYPISILDRED-WAVAESILA--NADVVIVSVP   74 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTC-GGGHHHHHT--TCSEEEECSC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCc-ccCHHHHhc--CCCEEEEeCC
Confidence            368999999999999999998876  35666653221 112223232  4688888644

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=82.18  E-value=7.9  Score=36.03  Aligned_cols=53  Identities=17%  Similarity=0.258  Sum_probs=38.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~  132 (353)
                      .-.+|.|.|+ |.||..++.+.+..+. .+|++...  +-+++ +.++++..+.++-.
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~G-a~Vi~~~~--~~~~~-~~~~~lGa~~vi~~  238 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTP-ATVIALDV--KEEKL-KLAERLGADHVVDA  238 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCC-CEEEEEES--SHHHH-HHHHHTTCSEEEET
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeC--CHHHH-HHHHHhCCCEEEec
Confidence            3468999999 9999999999987632 57887653  33333 45678888887643

>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A

Probab=81.93  E-value=7.6  Score=34.13  Aligned_cols=21  Identities=29%  Similarity=0.461  Sum_probs=18.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAE   98 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~   98 (353)
                      ||+|.|+|..|  +.+|+++.++
T Consensus         1 m~~iGiiGGmg--~~at~~~~~~   21 (228)
T 1jfl_A            1 MKTIGILGGMG--PLATAELFRR   21 (228)
T ss_dssp             CCCEEEEECSS--HHHHHHHHHH
T ss_pred             CCeEEEecccC--HHHHHHHHHH
Confidence            67899999999  8888888876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	353
d1q0qa3	149	d.81.1.3 (A:126-274) 1-deoxy-D-xylulose-5-phosphat	2e-46
d1r0ka3	138	d.81.1.3 (A:127-264) 1-deoxy-D-xylulose-5-phosphat	1e-43
d1q0qa2	151	c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-p	4e-41
d1r0ka2	150	c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-p	3e-35

>d1q0qa3 d.81.1.3 (A:126-274) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} Length = 149

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

 Score =  152 bits (386), Expect = 2e-46
 Identities = 61/136 (44%), Positives = 84/136 (61%), Gaps = 10/136 (7%)

Query: 201 ETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG----------LPEGALRRIILTA 250
           E+L+  G   +    +   ++LP DSEH+AIFQ +            L +  +  I+LT 
Sbjct: 1   ESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTG 60

Query: 251 SGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDN 310
           SGG FR+ P+  L  +    A +HPNWSMG+KI+VDSAT+ NKGLE IEA +LF A    
Sbjct: 61  SGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQ 120

Query: 311 IEIIIHPQSIIHSMVE 326
           +E++IHPQS+IHSMV 
Sbjct: 121 MEVLIHPQSVIHSMVR 136

>d1r0ka3 d.81.1.3 (A:127-264) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} Length = 138

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

 Score =  145 bits (367), Expect = 1e-43
 Identities = 66/150 (44%), Positives = 92/150 (61%), Gaps = 12/150 (8%)

Query: 202 TLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVE 261
           +L++ G  ++    +H   +LP DSEH+AIFQC        +RRII+TASGG FR   + 
Sbjct: 1   SLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLA 60

Query: 262 KLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSII 321
           ++  V    A++HPNWSMG KI++DSAT+ NKGLE+IEA +LF    +  EI++HPQS+I
Sbjct: 61  EMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVI 120

Query: 322 HSMVETQVLLYPVVMLVYSSGAIEITLAVP 351
           HSMVE            Y  G+I   +  P
Sbjct: 121 HSMVE------------YLDGSILAQIGSP 138

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} Length = 151

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

 Score =  139 bits (351), Expect = 4e-41
 Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 1/149 (0%)

Query: 77  KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL 136
           K +++LGSTGSIG  TLD+V  + + FRVVAL AG N+T + +Q   F P+   + +E+ 
Sbjct: 2   KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEAS 61

Query: 137 LDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA 196
              +K  L     + E+L+G+Q   + A   D   V+  IVG AGL PT+AAI AGK I 
Sbjct: 62  AKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL 121

Query: 197 LANKETLIAGGPFVLPLAHKHNIKILPAD 225
           LANK+         +   ++ N  + P D
Sbjct: 122 LANKDMRTPIAHT-MAWPNRVNSGVKPLD 149

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} Length = 150

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

 Score =  124 bits (311), Expect = 3e-35
 Identities = 55/153 (35%), Positives = 80/153 (52%), Gaps = 6/153 (3%)

Query: 76  PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 135
           P+ ++VLG+TGSIG  TLD++  + D+++V+AL A  N+  LAD  KR   +   + + S
Sbjct: 2   PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPS 61

Query: 136 LLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI 195
           L +++KEALA    +    A             A   +  I+GCAGLK T+AAI  GK +
Sbjct: 62  LYNDLKEALAGSSVEAAAGADALVEA---AMMGADWTMAAIIGCAGLKATLAAIRKGKTV 118

Query: 196 ALANKETLIAGGPFVLPLAHKHNIKILPADSEH 228
           ALANKE +       L           PA+S  
Sbjct: 119 ALANKEDMRTPIGHTLA---WPKRMETPAESLD 148

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	353
d1r0ka3	138	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	100.0
d1q0qa3	149	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	100.0
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	100.0
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	100.0
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	97.96
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	97.81
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	97.67
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.62
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	97.53
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	97.43
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.42
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.38
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	97.3
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	97.28
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.26
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	97.26
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.05
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	96.96
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	96.89
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.87
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.84
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	96.84
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.8
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.78
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	96.73
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.61
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.52
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	96.48
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.46
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.4
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	96.39
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.35
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	96.19
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.19
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.15
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.1
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	96.08
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.08
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	96.03
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.94
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.92
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.91
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.89
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	95.85
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	95.77
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.6
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	95.35
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.22
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.2
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	95.18
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	95.12
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	95.07
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	94.92
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	94.73
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.69
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	94.61
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	94.53
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	94.45
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.32
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	94.29
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	94.01
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	93.98
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	93.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.68
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	93.64
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.62
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	93.59
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	93.55
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	93.39
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	93.38
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	93.33
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	93.25
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	93.24
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	93.09
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	93.01
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	92.96
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	92.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	92.88
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	92.88
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	92.85
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	92.72
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	92.58
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	92.51
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	92.5
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	92.39
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.32
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	92.31
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	91.94
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	91.7
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	91.63
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	91.58
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	91.57
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	91.56
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	91.12
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	91.08
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	90.58
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	90.46
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	90.36
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	90.11
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	89.72
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	89.65
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	89.08
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	89.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	88.96
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	88.95
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	88.93
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	88.66
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.44
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	88.43
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	88.42
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	88.39
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	88.29
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	88.29
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	88.09
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	87.95
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	87.36
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	87.29
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	86.93
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	86.92
d1neka2	330	Succinate dehydogenase {Escherichia coli [TaxId: 5	86.74
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	86.52
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	86.5
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	86.45
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	86.34
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	86.21
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.95
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	85.87
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	85.79
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	85.51
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	85.33
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	85.15
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	85.08
d1xrsb1	160	D-lysine 5,6-aminomutase beta subunit KamE, C-term	85.03
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	84.82
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	84.58
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	84.55
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	84.37
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	84.34
d1kf6a2	311	Fumarate reductase {Escherichia coli [TaxId: 562]}	84.02
d1s8na_	190	Probable two-component system transcriptional regu	84.01
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	83.85
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	83.51
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	83.46
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	83.32
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	83.26
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	83.26
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	83.21
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	82.95
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	82.94
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	82.49
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	82.36
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.18
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	82.12
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	81.51
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	81.4
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	81.25
d1lw7a2	192	Transcriptional regulator NadR, ribosylnicotinamid	81.23
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	81.01
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	80.84
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	80.45
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	80.33

>d1r0ka3 d.81.1.3 (A:127-264) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=100.00  E-value=1.2e-77  Score=518.72  Aligned_cols=135  Identities=46%  Similarity=0.754  Sum_probs=127.5

Q ss_pred             ceeecccchhHHhhhcCCeEeecCCchhHHHHhhcCCCCCCcceEEEEecCCcCCCCChhhhhcCCHHHHhcCCCCCCCC
Q 018600          202 TLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGK  281 (353)
Q Consensus       202 SLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~L~g~~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~ALkHPnW~MG~  281 (353)
                      ||||||+++++.+++++++|+|||||||||||||.+.+.+.|++|+|||||||||++++++|++||++|||+||||+||+
T Consensus         1 SlV~aG~li~~~~~k~~~~IiPIDSEH~AI~Q~L~~~~~~~I~kI~LTASGGPF~~~~~~~l~~vt~~~al~HP~W~MG~   80 (138)
T d1r0ka3           1 SLVSAGGLMIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGA   80 (138)
T ss_dssp             HHHTTHHHHHHHHHHHTCEEEECSHHHHHHHHHCCTTCGGGEEEEEEEECCCTTTTCCHHHHTTCCHHHHHC------CH
T ss_pred             CEEechHHHHHHHHHcCCeEEecCchHHHHHHHHhhcCcccccEEEEeccchhhhcchHHHhhcCCHHHHhcCCeeeccc
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccccchhHHHHHhhhhcCCCCCceEEEEcCCcceEEEEEecCCceeeee
Q 018600          282 KITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVM  336 (353)
Q Consensus       282 KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvIHPqSiIHsmVef~DGs~~~~~  336 (353)
                      |||||||||||||||+||||||||+++|+|+|+|||||||||||+|.||++.+.|
T Consensus        81 KisIDSATmmNK~lEvIEA~~LF~~~~~~I~v~IHpqsiiHs~V~f~Dgs~~a~~  135 (138)
T d1r0ka3          81 KISIDSATMMNKGLELIEAFHLFQIPLEKFEILVHPQSVIHSMVEYLDGSILAQI  135 (138)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHCCCGGGEEEEECTTCCEEEEEEETTSCEEEEE
T ss_pred             eeeccHHHHHHHHHhHHHHHHHHCcCHHHeEEEECCCceEEEEEEECCCcEEEec
Confidence            9999999999999999999999999999999999999999999999999999987

>d1q0qa3 d.81.1.3 (A:126-274) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.8e-78  Score=525.38  Aligned_cols=136  Identities=45%  Similarity=0.738  Sum_probs=131.7

Q ss_pred             cceeecccchhHHhhhcCCeEeecCCchhHHHHhhcCC----------CCCCcceEEEEecCCcCCCCChhhhhcCCHHH
Q 018600          201 ETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGL----------PEGALRRIILTASGGAFRDWPVEKLKEVKVAD  270 (353)
Q Consensus       201 ESLV~aG~li~~~a~~~~~~IlPVDSEHsAIfQ~L~g~----------~~~~v~kIiLTASGGPFr~~~~e~l~~vT~~~  270 (353)
                      |||||||++|++.|++++++|+|||||||||||||.+.          +.+.|++|+|||||||||+++.++|++||++|
T Consensus         1 EslV~aG~li~~~akk~~~~iiPvDSEH~AIfQ~l~~~~~~~~~~~~~~~~~I~ki~LTASGGPF~~~~~~~l~~vt~~~   80 (149)
T d1q0qa3           1 ESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQ   80 (149)
T ss_dssp             HHHHHHTHHHHHHHHHHTCEEEECSHHHHHHHHTSCHHHHTTTTTSCTGGGTEEEEEEEECCCTTTTSCGGGGGGCCHHH
T ss_pred             CcEEEcHHHHHHHHHHcCCeEEecChHHHHHHHHhhhhhhcccccccccccceeEEEEEcCCccccccchhhhhccCHHH
Confidence            89999999999999999999999999999999999752          34579999999999999999999999999999


Q ss_pred             HhcCCCCCCCCccceecccccchhHHHHHhhhhcCCCCCceEEEEcCCcceEEEEEecCCceeeee
Q 018600          271 ALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIIIHPQSIIHSMVETQVLLYPVVM  336 (353)
Q Consensus       271 ALkHPnW~MG~KITIDSATmmNKgLEvIEA~~LF~i~~d~IevvIHPqSiIHsmVef~DGs~~~~~  336 (353)
                      ||+||||+||+|||||||||||||||+||||||||+++++|+|||||||||||||+|.||++.+.|
T Consensus        81 Al~HP~W~MG~KIsIDSATmmNKglEvIEA~~LF~l~~~kI~v~IHpqSiiHs~V~f~DGs~~a~~  146 (149)
T d1q0qa3          81 ACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQL  146 (149)
T ss_dssp             HHCCSSCCCCHHHHHHHHHTHHHHHHHHHHHHHHTCCGGGEEEEECTTCCEEEEEEETTSCEEEEE
T ss_pred             HhhCCcccccceeeccHHHHHHHHHHHHHHHHHhCCCHHHEEEEECCCCeeeEEEEECCCCEEEec
Confidence            999999999999999999999999999999999999999999999999999999999999999987

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=100.00  E-value=2e-53  Score=369.67  Aligned_cols=148  Identities=41%  Similarity=0.581  Sum_probs=139.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ||+|+|||||||||+||||||++|||+|+|++|+|++|+++|.+|+++|+|++|++.|++.+++++..+.+  .+++++.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~--~~~~v~~   79 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAG--SSVEAAA   79 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTT--CSSEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhh--ccccccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999988764  4689999


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecCCchh
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHS  229 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVDSEHs  229 (353)
                      |.+++.+++. .++|+||+||+|++||+||++|+++||+|||||||||||||.++++.+   +.+++||||||+
T Consensus        80 g~~~l~~~~~-~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLANKEslV~ag~~~l~~~---~~~iiPvDSEH~  149 (150)
T d1r0ka2          80 GADALVEAAM-MGADWTMAAIIGCAGLKATLAAIRKGKTVALANKEDMRTPIGHTLAWP---KRMETPAESLDF  149 (150)
T ss_dssp             SHHHHHHHHT-SCCSEEEECCCSGGGHHHHHHHHHTTSEEEECCSHCTHHHHHHHHHTT---SCCCCCCCCCCH
T ss_pred             Cccchheecc-cccceeeeecCchhHHHHHHHHHhcCCEEEEecchhhhhhhHHHHHHc---CCcCcCccCCcC
Confidence            9999999875 579999999999999999999999999999999999999999887654   567999999997

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-52  Score=365.61  Aligned_cols=149  Identities=39%  Similarity=0.575  Sum_probs=144.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ||+|+|||||||||+||||||++|||+|+|++|+||+|+++|.+|+++|+|++|++.|++.+++++..+.+.+.+++++.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999998877677899999


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEeecC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPAD  225 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~IlPVD  225 (353)
                      |++++.+++..+++|+||+||+|++||+||++|+++||+|||||||||||||++ |+.+++++++|+|||
T Consensus        81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLANKEslV~aG~i-~~~~~k~~~~IiPVD  149 (151)
T d1q0qa2          81 GQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKDMRTPIAHT-MAWPNRVNSGVKPLD  149 (151)
T ss_dssp             SHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECCHCTHHHHHHH-HHTTSCCCCSCCCCC
T ss_pred             ChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEEccHHHHhHHHH-HHHHHHhCCcEEcCc
Confidence            999999999999999999999999999999999999999999999999999985 678899999999999

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=97.96  E-value=4.3e-05  Score=63.77  Aligned_cols=137  Identities=15%  Similarity=0.140  Sum_probs=93.8

Q ss_pred             eeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -||+|+| +|++|+. -+..+++.++.|+|+|++ .+|.+...+.+++|+-..++                         
T Consensus         4 irigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~-d~~~~~~~~~~~~~~~~~~~-------------------------   56 (181)
T d1zh8a1           4 IRLGIVG-CGIAARELHLPALKNLSHLFEITAVT-SRTRSHAEEFAKMVGNPAVF-------------------------   56 (181)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEE-CSSHHHHHHHHHHHSSCEEE-------------------------
T ss_pred             cEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEE-eccHhhhhhhhcccccccee-------------------------
Confidence            4899999 6999987 599999999999999976 55777766666666532221                         


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccce--eecccchhHHhhhcCCeEeec--------C
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETL--IAGGPFVLPLAHKHNIKILPA--------D  225 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESL--V~aG~li~~~a~~~~~~IlPV--------D  225 (353)
                        +.+.++.+.+++|.|+.+..-..-...+..|+++||.|.+ -|=.-  +.-..-+.+++++++..+...        +
T Consensus        57 --~~~~ell~~~~id~v~I~tp~~~h~~~~~~al~~gk~V~~-EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~  133 (181)
T d1zh8a1          57 --DSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVIC-EKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQ  133 (181)
T ss_dssp             --SCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEE-ESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHH
T ss_pred             --eeeeccccccccceeeccccccccccccccccccchhhhc-CCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccC
Confidence              1234566677899999888888888899999999999865 33111  112334678888888776532        2


Q ss_pred             CchhHHHHhhcCCCCCCc
Q 018600          226 SEHSAIFQCIQGLPEGAL  243 (353)
Q Consensus       226 SEHsAIfQ~L~g~~~~~v  243 (353)
                      .+...+.|.+......+|
T Consensus       134 ~~~~~~~~~i~~G~ig~i  151 (181)
T d1zh8a1         134 KEFEDFYQVVAEGKPNDL  151 (181)
T ss_dssp             HHHHHHHHHHHSCCCCSS
T ss_pred             HHHHHHHHHHHCCCCccC
Confidence            333455566654333333

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=97.81  E-value=1.8e-05  Score=66.60  Aligned_cols=110  Identities=17%  Similarity=0.335  Sum_probs=68.2

Q ss_pred             CeeEEEEecCChHhHHHH-HHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTL-DIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTL-dVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      +-||+|+| ||.||++.+ ++++++| .+++++++..+.-..=.+.+++|...+.                        .
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~-~~el~avas~~~~~~~~~~a~~~~i~~~------------------------~   57 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAK-YLEMGAMVGIDAASDGLARAQRMGVTTT------------------------Y   57 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCS-SEEEEEEECSCTTCHHHHHHHHTTCCEE------------------------S
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCC-cceEEEEEecchhccchhhhhhcCCccc------------------------c
Confidence            34899999 999999865 7877775 5999999764432232345566654332                        1


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCc--HHHHHHHHcCCcEeeecccceeecccchhHHh
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGL--KPTVAAIEAGKDIALANKETLIAGGPFVLPLA  214 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL--~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a  214 (353)
                      .|.+++.+.....++|+|..|..--...  .....|+++|+.+ +-|+=.-+  ||++-+.+
T Consensus        58 ~~~d~l~~~~~~~~iDiVf~ATpag~h~~~~~~~~aa~~G~~V-ID~s~a~~--vplvVPev  116 (157)
T d1nvmb1          58 AGVEGLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPGIRL-IDLTPAAI--GPYCVPVV  116 (157)
T ss_dssp             SHHHHHHHSGGGGGEEEEEECSCHHHHHHHHHHHHHHCTTCEE-EECSTTCS--SCBCCHHH
T ss_pred             cceeeeeecccccccCEEEEcCCchhHHHhHHHHHHHHcCCEE-EEcccccc--ceEEccCc
Confidence            1234444444455799999987633333  3567788888875 34433222  56665544

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.67  E-value=0.00016  Score=59.88  Aligned_cols=130  Identities=12%  Similarity=0.114  Sum_probs=91.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      -||+|+| +|.+|+.-+..+.+.| +|+|+|+. ..|.+.+.+.+++|+-.                     ..++++. 
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~-~~~i~ai~-d~~~~~~~~~~~~~~~~---------------------~~~~~~~-   56 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAP-NATISGVA-SRSLEKAKAFATANNYP---------------------ESTKIHG-   56 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCT-TEEEEEEE-CSSHHHHHHHHHHTTCC---------------------TTCEEES-
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCC-CCEEEEEE-eCCccccccchhccccc---------------------cceeecC-
Confidence            3799999 5999999999999875 69999975 45778877777777521                     1122222 


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeee----cccceeecccchhHHhhhcCCeEe-ecCCchhHH
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA----NKETLIAGGPFVLPLAHKHNIKIL-PADSEHSAI  231 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA----NKESLV~aG~li~~~a~~~~~~Il-PVDSEHsAI  231 (353)
                        .+.++.+.+++|.|+.+..-..-...+..|+++||.|.+-    ..   +.-..-+.+++++++..+. -----|+..
T Consensus        57 --~~~~ll~~~~iD~v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~---~~e~~~l~~~~~~~~~~~~v~~~~r~~~~  131 (184)
T d1ydwa1          57 --SYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMN---VTEFDKIVDACEANGVQIMDGTMWVHPQE  131 (184)
T ss_dssp             --SHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSS---HHHHHHHHHHHHTTTCCEEECCCGGGCHH
T ss_pred             --cHHHhhhccccceeeecccchhhcchhhhhhhccceeecccccccC---HHHHHHHHHHHHhhCCEEEEEEeeecChH
Confidence              3455666788999998888778889999999999998752    11   1123446788888887654 222346666


Q ss_pred             HHhhc
Q 018600          232 FQCIQ  236 (353)
Q Consensus       232 fQ~L~  236 (353)
                      |+.|.
T Consensus       132 ~~~~k  136 (184)
T d1ydwa1         132 ACMVR  136 (184)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66654

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.62  E-value=2.7e-05  Score=65.54  Aligned_cols=36  Identities=19%  Similarity=0.386  Sum_probs=32.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      |.||+|+||||.+|...++++.+||+ |+|..|++.+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~-~ei~~l~~~s   36 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPH-MTITALTVSA   36 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTT-EEEEEEEEET
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCC-CceEeeEeec
Confidence            67999999999999999999999996 9999997643

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=97.53  E-value=0.00029  Score=61.14  Aligned_cols=94  Identities=12%  Similarity=0.150  Sum_probs=74.0

Q ss_pred             CCCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCC
Q 018600           74 DGPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        74 ~~~k~I~ILGST---GSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      ..|-||+|+|..   |.++..-+..+++..++|+|+|++ ..|.+...+.+++|+.+.+...                  
T Consensus        14 ~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~-d~~~~~~~~~~~~~~~~~~~~~------------------   74 (237)
T d2nvwa1          14 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALY-NPTLKSSLQTIEQLQLKHATGF------------------   74 (237)
T ss_dssp             GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEE-CSCHHHHHHHHHHTTCTTCEEE------------------
T ss_pred             CCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEE-cCCHHHHHHHHHhcccccceee------------------
Confidence            345789999974   468888899998888899999986 5688888888888875433221                  


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCC
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK  193 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK  193 (353)
                             +.+.++...+++|.|+.+..-..-...+..|+++|+
T Consensus        75 -------~~~~~l~~~~~iD~V~i~tp~~~h~~~~~~al~aG~  110 (237)
T d2nvwa1          75 -------DSLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSS  110 (237)
T ss_dssp             -------SCHHHHHHCTTCSEEEECSCHHHHHHHHHHHHHHSS
T ss_pred             -------cchhhcccccccceeeccCCCcchhhHHHHHHHhcc
Confidence                   123456667899999999988888899999999997

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=97.43  E-value=0.00051  Score=59.32  Aligned_cols=136  Identities=15%  Similarity=0.107  Sum_probs=90.9

Q ss_pred             CCCeeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           74 DGPKPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      +.+-||+|+|+ |.+|++ -+..++.. ++|+|+|++ .+|.+.+.+.+++|+.+-.-+                    .
T Consensus        31 ~~~iriaiIG~-G~~~~~~~~~~~~~~-~~~~ivav~-d~~~~~a~~~~~~~~i~~~~~--------------------~   87 (221)
T d1h6da1          31 DRRFGYAIVGL-GKYALNQILPGFAGC-QHSRIEALV-SGNAEKAKIVAAEYGVDPRKI--------------------Y   87 (221)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHTTTC-SSEEEEEEE-CSCHHHHHHHHHHTTCCGGGE--------------------E
T ss_pred             CCCEEEEEEcC-cHHHHHHHHHHHHhC-CCceEEEEe-cCCHHHHHHHHHhhccccccc--------------------c
Confidence            34569999995 999986 56777766 579999976 468899988888886421100                    0


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeeccc-ceeecccchhHHhhhcCCeEeec-----CC
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKE-TLIAGGPFVLPLAHKHNIKILPA-----DS  226 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKE-SLV~aG~li~~~a~~~~~~IlPV-----DS  226 (353)
                      .+   +.+.++++.+++|.|+.+..=..-...+..|+++||.|.+--== .=+.-..-|.++++++++.+..-     |.
T Consensus        88 ~~---~d~~ell~~~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p  164 (221)
T d1h6da1          88 DY---SNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYNQ  164 (221)
T ss_dssp             CS---SSGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCH
T ss_pred             cc---CchhhhcccccceeeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCcEEEeeccccCH
Confidence            11   12345667788999998888888889999999999998652100 00112445677888888766533     33


Q ss_pred             chhHHHHhh
Q 018600          227 EHSAIFQCI  235 (353)
Q Consensus       227 EHsAIfQ~L  235 (353)
                      .+..+-+++
T Consensus       165 ~~~~~k~li  173 (221)
T d1h6da1         165 FSAQLDHLA  173 (221)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            344554444

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.42  E-value=7.4e-05  Score=63.48  Aligned_cols=43  Identities=26%  Similarity=0.451  Sum_probs=37.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD  119 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~  119 (353)
                      +.||+|+||||.+|...++++.+||+ |+++.++..++..+-..
T Consensus         5 kikVaIlGATGyvG~elirLL~~HP~-~ei~~l~S~~~aG~~~~   47 (183)
T d2cvoa1           5 EVRIAVLGASGYTGAEIVRLLANHPQ-FRIKVMTADRKAGEQFG   47 (183)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSS-EEEEEEECSTTTTSCHH
T ss_pred             ccEEEEECcccHHHHHHHHHHHhCCC-ceEEEEeccccCCCccc
Confidence            45899999999999999999999995 99999988777654443

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.38  E-value=9e-05  Score=63.62  Aligned_cols=41  Identities=15%  Similarity=0.289  Sum_probs=36.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL  117 (353)
                      |.||+|+||||.+|...++++.+||+ |+|+.|++.++..+-
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~-~ei~~l~s~~~aG~~   41 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPE-AKITYLSSRTYAGKK   41 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTT-EEEEEEECSTTTTSB
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCC-ceEEEeeccccCCCc
Confidence            67999999999999999999999995 999999988776543

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=97.30  E-value=0.00046  Score=57.12  Aligned_cols=112  Identities=12%  Similarity=0.095  Sum_probs=74.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      +.||+|+| +|.||+.-++.++++|+ |+++|+...+. +.       ..                        ...+..
T Consensus         3 kirvgiiG-~G~ig~~~~~~l~~~~~-~elvav~~~~~-~~-------~~------------------------~~~~~~   48 (170)
T d1f06a1           3 NIRVAIVG-YGNLGRSVEKLIAKQPD-MDLVGIFSRRA-TL-------DT------------------------KTPVFD   48 (170)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTCSS-EEEEEEEESSS-CC-------SS------------------------SSCEEE
T ss_pred             cceEEEEC-ChHHHHHHHHHHHhCCC-cEEEEEEeccc-cc-------cc------------------------cccccc
Confidence            45799999 59999999999999886 99999876542 10       00                        011222


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeec--ccchhHHhhhcCCeEeecC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG--GPFVLPLAHKHNIKILPAD  225 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~a--G~li~~~a~~~~~~IlPVD  225 (353)
                      ..+ +.++  ..++|.|+.+..-..-..-...|+++||.+.+.-|...-..  -..+.++|++.+..++ +.
T Consensus        49 ~~~-~~~~--~~~~D~Vvi~tp~~~h~~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~~~~~~-i~  116 (170)
T d1f06a1          49 VAD-VDKH--ADDVDVLFLCMGSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVAL-VS  116 (170)
T ss_dssp             GGG-GGGT--TTTCSEEEECSCTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEE-CS
T ss_pred             chh-hhhh--ccccceEEEeCCCcccHHHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhcCceEE-Ee
Confidence            222 1222  34799999988888888889999999999877655332222  2345667777776543 44

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.0005  Score=55.96  Aligned_cols=111  Identities=14%  Similarity=0.211  Sum_probs=78.3

Q ss_pred             eeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .||+|+| +|++|.. -+..++++|+ |+|+|+.. +|.+...+.+++|+.++                         + 
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~-~~i~~v~d-~~~~~~~~~~~~~~~~~-------------------------~-   52 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASD-WTLQGAWS-PTRAKALPICESWRIPY-------------------------A-   52 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSS-EEEEEEEC-SSCTTHHHHHHHHTCCB-------------------------C-
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCC-cEEEEEEe-chhHhhhhhhhcccccc-------------------------c-
Confidence            4799999 6999986 6899998875 99999875 45566666666775432                         1 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee----ecccceeecccchhHHhhhcCCeEee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL----ANKETLIAGGPFVLPLAHKHNIKILP  223 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL----ANKESLV~aG~li~~~a~~~~~~IlP  223 (353)
                        +.+.++.  +++|.|+.+..--.-..-+..|+++||.|.+    |.-   ..-..-+.+++++++..+..
T Consensus        53 --~~~~~l~--~~~D~V~I~tp~~~h~~~~~~al~~gk~V~~EKPla~~---~~e~~~l~~~a~~~~~~~~v  117 (164)
T d1tlta1          53 --DSLSSLA--ASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAEN---LRDAERLVELAARKKLTLMV  117 (164)
T ss_dssp             --SSHHHHH--TTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSS---HHHHHHHHHHHHHTTCCEEE
T ss_pred             --ccchhhh--hhcccccccccchhccccccccccccceeeccccccCC---HHHHHHHHHHHHHcCCcEEE
Confidence              1123333  3689998887777777788999999999863    321   12345567888998876553

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.26  E-value=0.00029  Score=59.43  Aligned_cols=52  Identities=19%  Similarity=0.327  Sum_probs=44.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeec----CCHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG----SNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag----sNv~lL~~Q~~eFkPk~V~i  131 (353)
                      ||.|+|+||+||+..++-+.+.  .++|+++.-.    .|.+.+.+..++++|++|.-
T Consensus         3 KIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih   58 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGK--NVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVIN   58 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhC--CCEEEEeechhccCCCHHHHHHHHHHcCCCEEEe
Confidence            4999999999999999998764  7999998754    57888888888999998774

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00032  Score=58.41  Aligned_cols=40  Identities=28%  Similarity=0.427  Sum_probs=31.9

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL  117 (353)
                      .+||||+|+|+||.||...++-+.+.  .|+|++++  +|.+++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~--R~~~~~   40 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLV--RDSSRL   40 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCGGGS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEE--cChhhc
Confidence            36899999999999999999866654  68999986  454443

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.96  E-value=0.00093  Score=55.83  Aligned_cols=123  Identities=20%  Similarity=0.239  Sum_probs=74.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCc--eEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDK--FRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~--F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      +-+|+|+| .|.||++.++++.++++.  ++|++++-.+..        .++++.+-+   +....+++.+....  ...
T Consensus         4 ~i~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~--------~~~~~g~~~---~~~~~~~~~~~~~~--~~~   69 (168)
T d1ebfa1           4 VVNVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAERS--------LISKDFSPL---NVGSDWKAALAAST--TKT   69 (168)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSBE--------EECSSCSCC---SCTTCHHHHHHTCC--CBC
T ss_pred             EEEEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEEeeee--------eecccccch---Hhhhhhhhhhhhcc--ccc
Confidence            45899996 799999999999987764  566776532211        112222111   11122333332211  111


Q ss_pred             EecHHHHH-HHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHH
Q 018600          154 LAGEQGVI-EAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPL  213 (353)
Q Consensus       154 ~~G~~gl~-~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~  213 (353)
                      .. .+-+. .+...+..|+++....|-....-...|+++|+.|-.|||.-+...++...++
T Consensus        70 ~~-~~~~~~~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G~hVVTANK~~la~~~~~~~~L  129 (168)
T d1ebfa1          70 LP-LDDLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKAL  129 (168)
T ss_dssp             CC-HHHHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHH
T ss_pred             cc-HHHHHHHhccCCCceEEEEecCChHHHHHHHHHHHcCCeEEecCcccccCCHHHHHHH
Confidence            11 22333 3445667889998887766655567899999999999997777665555444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.00044  Score=57.45  Aligned_cols=38  Identities=18%  Similarity=0.346  Sum_probs=30.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCC--CceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHE--DKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~p--d~F~VvaLaagsN  113 (353)
                      ||||+|+||||.+|+..++.+.+||  ..+++++++..++
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            7899999999999999999766555  4577877765443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.87  E-value=0.00039  Score=57.15  Aligned_cols=39  Identities=28%  Similarity=0.502  Sum_probs=33.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHh--CCCceEEEEEeecCCHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAE--HEDKFRVVALAAGSNIT  115 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~--~pd~F~VvaLaagsNv~  115 (353)
                      |.+|+|+||||.+|+..++++.+  || .|++..++..++..
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP-~~~l~~~~s~~~~G   42 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFP-LHRLHLLASAESAG   42 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCC-CSCEEEEECTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCC-ceEEEEEeecccCC
Confidence            56899999999999999999974  55 48999998877654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.84  E-value=0.00035  Score=57.90  Aligned_cols=35  Identities=31%  Similarity=0.444  Sum_probs=31.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +||||.|+|+||+||...++-+.+.++.++|.+++
T Consensus         1 t~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~   35 (212)
T d2a35a1           1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA   35 (212)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEe
Confidence            47999999999999999999988888777888765

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=96.84  E-value=0.00087  Score=56.39  Aligned_cols=51  Identities=27%  Similarity=0.411  Sum_probs=41.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--------CHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--------NITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--------Nv~lL~~Q~~eFkPk~V~i  131 (353)
                      ||.|.|+||+||+...+-+.   +++.++++.-++        |.+.+.+.+++++|++|.=
T Consensus         2 KILItG~tGfiG~~l~~~L~---~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih   60 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLA---PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN   60 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTT---TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHH---hCCCEEEEECCCccccCcCCCHHHHHHHHHHcCCCEEEE
Confidence            59999999999999776554   567788887665        5788888899999998874

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.80  E-value=0.004  Score=51.04  Aligned_cols=97  Identities=15%  Similarity=0.218  Sum_probs=65.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCce-EEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKF-RVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F-~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|+|+ |.||..++.+.+..  .. +|++..  +|-+++ +.++++.++.+.-..+....+..+.            
T Consensus        30 ~~VlV~Ga-G~iG~~~~~~ak~~--Ga~~Vi~~~--~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~~------------   91 (182)
T d1vj0a2          30 KTVVIQGA-GPLGLFGVVIARSL--GAENVIVIA--GSPNRL-KLAEEIGADLTLNRRETSVEERRKA------------   91 (182)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TBSEEEEEE--SCHHHH-HHHHHTTCSEEEETTTSCHHHHHHH------------
T ss_pred             CEEEEECC-Cccchhheeccccc--ccccccccc--cccccc-cccccccceEEEeccccchHHHHHH------------
Confidence            57999997 99999999999986  33 677664  355555 6889999988876555444433322            


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                          +.++.....+|+|+++..+-..+.-.+.+++.|=++
T Consensus        92 ----i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~i  127 (182)
T d1vj0a2          92 ----IMDITHGRGADFILEATGDSRALLEGSELLRRGGFY  127 (182)
T ss_dssp             ----HHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEE
T ss_pred             ----HHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEE
Confidence                233333445899999975556666666666554443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.78  E-value=0.0022  Score=51.18  Aligned_cols=41  Identities=22%  Similarity=0.261  Sum_probs=33.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL  117 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL  117 (353)
                      .|++|.|.|+||.||++.++-+.+...++.|++++  +|-+.+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~--R~~~~~   42 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV--RSAQGK   42 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEE--SCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEc--CCHHHH
Confidence            57899999999999999999998877778888775  454443

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=96.73  E-value=0.0021  Score=52.20  Aligned_cols=113  Identities=16%  Similarity=0.188  Sum_probs=78.7

Q ss_pred             eeEEEEecCChHhHH-HHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQ-TLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtq-TLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .||+|+|+ |++|+. -+.+++++|+ ++++  .+..|.+.+.+.+++|+...++ .|                      
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~-~~~~--~~d~~~~~~~~~~~~~~~~~~~-~~----------------------   54 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPD-IELV--LCTRNPKVLGTLATRYRVSATC-TD----------------------   54 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTT-EEEE--EECSCHHHHHHHHHHTTCCCCC-SS----------------------
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCC-cEEE--EEECCHHHHHHHHHhccccccc-cc----------------------
Confidence            37999995 899977 6899998875 7875  4678999999999888743221 11                      


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc--eeecccchhHHhhhcCCeEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKIL  222 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES--LV~aG~li~~~a~~~~~~Il  222 (353)
                          ..++.+ +++|.|+.+..-..-...+.+|+++||.|.+ =|=-  =..-..-+.+++++++..+.
T Consensus        55 ----~~~ll~-~~iD~V~I~tp~~~H~~~~~~al~~gk~V~~-EKP~~~~~~e~~~l~~~a~~~~~~~~  117 (167)
T d1xeaa1          55 ----YRDVLQ-YGVDAVMIHAATDVHSTLAAFFLHLGIPTFV-DKPLAASAQECENLYELAEKHHQPLY  117 (167)
T ss_dssp             ----TTGGGG-GCCSEEEECSCGGGHHHHHHHHHHTTCCEEE-ESCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred             ----HHHhcc-cccceeccccccccccccccccccccccccc-CCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence                122333 4699999998888888899999999999864 1100  01113445677788876553

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.0036  Score=51.02  Aligned_cols=77  Identities=14%  Similarity=0.169  Sum_probs=55.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc-hHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~-~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|.|++|.||..++.+.+..  .++|++++.  +-+++ +.++++..+.++-..+.. .+.+               
T Consensus        30 ~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~--~~~~~-~~~~~~Ga~~vi~~~~~~~~~~i---------------   89 (174)
T d1yb5a2          30 ESVLVHGASGGVGLAACQIARAY--GLKILGTAG--TEEGQ-KIVLQNGAHEVFNHREVNYIDKI---------------   89 (174)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHT--TCEEEEEES--SHHHH-HHHHHTTCSEEEETTSTTHHHHH---------------
T ss_pred             CEEEEEecccccccccccccccc--Ccccccccc--ccccc-ccccccCcccccccccccHHHHh---------------
Confidence            47999999999999999999987  688998873  34444 678899998877543322 2222               


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVG  178 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG  178 (353)
                           .+......+|+|+++..|
T Consensus        90 -----~~~t~~~g~d~v~d~~g~  107 (174)
T d1yb5a2          90 -----KKYVGEKGIDIIIEMLAN  107 (174)
T ss_dssp             -----HHHHCTTCEEEEEESCHH
T ss_pred             -----hhhhccCCceEEeecccH
Confidence                 233334468999998654

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.52  E-value=0.0011  Score=54.63  Aligned_cols=37  Identities=24%  Similarity=0.477  Sum_probs=31.4

Q ss_pred             eEEEEecCChHhHHHHHHHHhCC-CceEEEEEeecCCH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHE-DKFRVVALAAGSNI  114 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~p-d~F~VvaLaagsNv  114 (353)
                      ||+|+||||.+|...++++.+|| ..+++..++.+++.
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~   40 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSA   40 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccc
Confidence            79999999999999999999997 36778777766543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.0028  Score=55.91  Aligned_cols=29  Identities=28%  Similarity=0.422  Sum_probs=26.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      ||.|.|+||+||+..++-+.+.  .++|+++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~--g~~V~~~   30 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQN--GHDVIIL   30 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHC--cCEEEEE
Confidence            5999999999999999999876  5889987

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.46  E-value=0.0031  Score=54.00  Aligned_cols=52  Identities=10%  Similarity=0.232  Sum_probs=39.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee-------------------------cCCHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA-------------------------GSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa-------------------------gsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      ||.|.|+||+||+..++-+.+.  .++|+++--                         -.|.+.|.+..+.++|++|+-
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            6999999999999999988764  688998721                         045566666777777777653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.40  E-value=0.0037  Score=54.52  Aligned_cols=54  Identities=20%  Similarity=0.227  Sum_probs=41.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC------------------------CHHHHHHHHHhhCCCEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS------------------------NITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags------------------------Nv~lL~~Q~~eFkPk~V~i~  132 (353)
                      |||.|.|+||+||..+.+-+.+.  .++|.++.-..                        |.+.+.+..+.++|++|+..
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            77999999999999999998876  57888886322                        45566677777777776643

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=96.39  E-value=0.003  Score=54.47  Aligned_cols=55  Identities=11%  Similarity=0.111  Sum_probs=44.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC-----HHHHHHHHHhhCCCEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN-----ITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN-----v~lL~~Q~~eFkPk~V~i~  132 (353)
                      +|||.|.|+||+||+..++-+.+.  .+.++.+.-+++     .+.+.+..+..+|+.+...
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~   61 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLA   61 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTTCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCchhccccCHHHHHHHHhhcCCCEEEEc
Confidence            589999999999999999998875  466777765544     5677777788899998764

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.35  E-value=0.0059  Score=49.44  Aligned_cols=89  Identities=17%  Similarity=0.234  Sum_probs=60.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc-cchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE-SLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de-~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -.+|.|.|++|.||..++++.+.+  ..+|++.+.  +-+++ +.++++.++.+...+. +..+++++            
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~--~~~~~-~~l~~~Ga~~vi~~~~~~~~~~v~~------------   88 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMI--GARIYTTAG--SDAKR-EMLSRLGVEYVGDSRSVDFADEILE------------   88 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEES--SHHHH-HHHHTTCCSEEEETTCSTHHHHHHH------------
T ss_pred             CCEEEEECCCCCcccccchhhccc--cccceeeec--ccccc-cccccccccccccCCccCHHHHHHH------------
Confidence            357999999999999999999887  688988774  44554 6788999998876433 33334433            


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHH
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIE  190 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~  190 (353)
                              ......+|+|++...| .-+...+.+++
T Consensus        89 --------~t~~~g~d~v~d~~g~-~~~~~~~~~l~  115 (183)
T d1pqwa_          89 --------LTDGYGVDVVLNSLAG-EAIQRGVQILA  115 (183)
T ss_dssp             --------HTTTCCEEEEEECCCT-HHHHHHHHTEE
T ss_pred             --------HhCCCCEEEEEecccc-hHHHHHHHHhc
Confidence                    2233468889987654 33444444433

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=96.19  E-value=0.0038  Score=55.02  Aligned_cols=37  Identities=27%  Similarity=0.352  Sum_probs=31.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      .+|+|+|+|+||+||....+.+.+.  .|+|++++=+.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~   38 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLK   38 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcc
Confidence            4689999999999999999999875  689999975443

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.19  E-value=0.0041  Score=51.68  Aligned_cols=98  Identities=13%  Similarity=0.168  Sum_probs=64.6

Q ss_pred             eeEEEE-ecCChHhHHHHHHHHhCCCceEEEEEeec-CCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEE
Q 018600           77 KPISVL-GSTGSIGTQTLDIVAEHEDKFRVVALAAG-SNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        77 k~I~IL-GSTGSIGtqTLdVI~~~pd~F~VvaLaag-sNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .++.|+ |++|.+|..++.+.+..  .++|++.+.+ .+.+.+.+.++++..+++...++....++.+...         
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~--Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~---------   98 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIK---------   98 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHH---------
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhc--CCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHH---------
Confidence            356775 89999999999999987  7899998755 4778889999999999998765433322222111         


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                          .+.. .....+|+|++++.|-. +...+.+++.
T Consensus        99 ----~~~~-~~g~~vdvv~D~vg~~~-~~~~~~~l~~  129 (189)
T d1gu7a2          99 ----EWIK-QSGGEAKLALNCVGGKS-STGIARKLNN  129 (189)
T ss_dssp             ----HHHH-HHTCCEEEEEESSCHHH-HHHHHHTSCT
T ss_pred             ----HHHh-hccCCceEEEECCCcch-hhhhhhhhcC
Confidence                0111 12346899999865432 3333443333

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=96.15  E-value=0.044  Score=45.99  Aligned_cols=107  Identities=18%  Similarity=0.194  Sum_probs=70.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |+||+|-| .|-||+..++.+.++|| ++|+++.-.+...... ...+++-+.. ...++....+++.    +  .++- 
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~d-i~vvaInd~~~~~~~~-~l~~~~~~~~-~~~~~~~~~~~~~----~--~~v~-   69 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDD-MKVIGVSKTRPDFEAR-MALKKGYDLY-VAIPERVKLFEKA----G--IEVA-   69 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSS-EEEEEEEESSCSHHHH-HHHHTTCCEE-ESSGGGHHHHHHT----T--CCCC-
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCC-ceEEEEecCCcHHHHH-HHHhcCCceE-ecccccceeeccc----C--cccC-
Confidence            78999999 79999999999998875 9999998765433322 2334443333 2334444444431    1  1221 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                      |  ...++.+  ++|+|+.+---+.+.+-...-+++|++..+
T Consensus        70 g--~~~~~~~--~vDvViEcTG~f~~~~~~~~hl~~G~K~vi  107 (171)
T d1cf2o1          70 G--TVDDMLD--EADIVIDCTPEGIGAKNLKMYKEKGIKAIF  107 (171)
T ss_dssp             E--EHHHHHH--TCSEEEECCSTTHHHHHHHHHHHTTCEEEE
T ss_pred             C--ChhHhhc--CCCEEEEccCCCCCHHHHHHHHHcCCCEEE
Confidence            2  2333332  699999998888777777777889987655

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.10  E-value=0.027  Score=47.71  Aligned_cols=106  Identities=16%  Similarity=0.180  Sum_probs=67.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |-||+|-| .|-||+..++.+.++|| ++|||+.-..--.......+.+. ..  ...++....+.+    .+  ..+. 
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~d-ievVaInd~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~----~~--i~v~-   68 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPD-MKLVGVAKTSPNYEAFIAHRRGI-RI--YVPQQSIKKFEE----SG--IPVA-   68 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTT-EEEEEEECSSCSHHHHHHHHTTC-CE--ECCGGGHHHHHT----TT--CCCC-
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCC-CEEEEEECCCCcHHHHHhcccCc-ce--eccCccceeccc----cc--eecC-
Confidence            56899999 89999999999999875 99999976543333332233322 22  222233333332    11  1121 


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                      |  .+.++..  ++|+|+.+--.+.+.+-.-.-+++||++.+
T Consensus        69 g--~~~~~~~--~vDiViecTG~f~~~e~a~~hl~~G~KvIi  106 (178)
T d1b7go1          69 G--TVEDLIK--TSDIVVDTTPNGVGAQYKPIYLQLQRNAIF  106 (178)
T ss_dssp             C--CHHHHHH--HCSEEEECCSTTHHHHHHHHHHHTTCEEEE
T ss_pred             C--chhhhhh--cCCEEEECCCCcCCHHHHHHHHHcCCEEEE
Confidence            2  2333332  589999998888888877888899988766

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0072  Score=52.58  Aligned_cols=54  Identities=19%  Similarity=0.312  Sum_probs=41.2

Q ss_pred             eeE-EEEecCChHhHHHHHHHHhCCCceEEEEEeec-------------------------------CCHHHHHHHHHhh
Q 018600           77 KPI-SVLGSTGSIGTQTLDIVAEHEDKFRVVALAAG-------------------------------SNITLLADQVKRF  124 (353)
Q Consensus        77 k~I-~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag-------------------------------sNv~lL~~Q~~eF  124 (353)
                      ||| .|.|+||+||+...+-+.+.  .|+|+|+.-.                               +|.+.+.+...++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV   78 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence            689 69999999999999988775  6999998532                               2455666666777


Q ss_pred             CCCEEEEe
Q 018600          125 KPQVVAVR  132 (353)
Q Consensus       125 kPk~V~i~  132 (353)
                      +|.+++..
T Consensus        79 ~~~~v~~~   86 (347)
T d1t2aa_          79 KPTEIYNL   86 (347)
T ss_dssp             CCSEEEEC
T ss_pred             ccceeeee
Confidence            77777654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.08  E-value=0.029  Score=43.74  Aligned_cols=94  Identities=16%  Similarity=0.121  Sum_probs=63.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -|+|.|+|| |-+|..+.+.+.++  .++|+  .+++|.+++.+.+++|.-..+...+......+               
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~--g~~V~--v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~---------------   61 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDS--GIKVT--VACRTLESAKKLSAGVQHSTPISLDVNDDAAL---------------   61 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTT--TCEEE--EEESCHHHHHHHHTTCTTEEEEECCTTCHHHH---------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC--CCEEE--EEECChHHHHHHHhcccccccccccccchhhh---------------
Confidence            378999998 99999999999887  56764  56899999999998887544443332222222               


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                           .+...  ..|.++.+............+++.+..+.
T Consensus        62 -----~~~i~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~   95 (182)
T d1e5qa1          62 -----DAEVA--KHDLVISLIPYTFHATVIKSAIRQKKHVV   95 (182)
T ss_dssp             -----HHHHT--TSSEEEECSCGGGHHHHHHHHHHHTCEEE
T ss_pred             -----Hhhhh--ccceeEeeccchhhhHHHHHHHhhcccee
Confidence                 22222  46677777766665555566666655543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=96.03  E-value=0.012  Score=49.23  Aligned_cols=34  Identities=18%  Similarity=0.265  Sum_probs=29.1

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .++||.|+||||+||+..++-+.+.  .++|++++=
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R   35 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFR   35 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEC
Confidence            3568999999999999999988875  588999863

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.94  E-value=0.0075  Score=53.88  Aligned_cols=31  Identities=23%  Similarity=0.351  Sum_probs=26.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      |++.|.|+||+||+...+-+.+.  .++|+++.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~   32 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIK   32 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEE
Confidence            56669999999999999999876  68998875

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.92  E-value=0.0075  Score=53.94  Aligned_cols=30  Identities=20%  Similarity=0.347  Sum_probs=25.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      |||.|.|+||+||+...+-+.+.  .++|+++
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~--g~~V~~i   31 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKK--NYEVCIV   31 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC--cCEEEEE
Confidence            56999999999999998888764  5888887

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.042  Score=44.23  Aligned_cols=100  Identities=19%  Similarity=0.205  Sum_probs=72.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|+|+|+ |.||..++.+++...- -+|++.  .+|-++| +.+++|..+++...+++...+..+.+..          
T Consensus        28 d~VlI~G~-G~iG~~~~~~a~~~G~-~~Vi~~--d~~~~rl-~~a~~~Ga~~~~~~~~~~~~~~~~~~~~----------   92 (171)
T d1pl8a2          28 HKVLVCGA-GPIGMVTLLVAKAMGA-AQVVVT--DLSATRL-SKAKEIGADLVLQISKESPQEIARKVEG----------   92 (171)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC-SEEEEE--ESCHHHH-HHHHHTTCSEEEECSSCCHHHHHHHHHH----------
T ss_pred             CEEEEECC-CccHHHHHHHHHHcCC-ceEEec--cCCHHHH-HHHHHhCCcccccccccccccccccccc----------
Confidence            47999997 9999999999998642 256554  3565555 4789999999988877666555544321          


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeee
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA  198 (353)
                             -....+|+|+++..+-..+.-.+..++.|-++.+.
T Consensus        93 -------~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~  127 (171)
T d1pl8a2          93 -------QLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLV  127 (171)
T ss_dssp             -------HHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred             -------cCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEE
Confidence                   12346899999977777788888888888776544

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.91  E-value=0.008  Score=52.94  Aligned_cols=52  Identities=25%  Similarity=0.292  Sum_probs=39.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee--------------------------cCCHHHHHHHHHhhCCCEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA--------------------------GSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa--------------------------gsNv~lL~~Q~~eFkPk~V~  130 (353)
                      |.|.|.|+||+||...++-+.+.  .++|+++..                          -+|.+.+.+..+.++|++|.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            56889999999999999888775  588988731                          13556666666777777765

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.89  E-value=0.0026  Score=52.81  Aligned_cols=34  Identities=21%  Similarity=0.287  Sum_probs=29.5

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      .+|||.|+|+||.||+..++-+.+.  .++|++++=
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R   35 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDL--GHPTFLLVR   35 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEC
Confidence            4689999999999999999988765  589999873

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=95.85  E-value=0.0041  Score=51.75  Aligned_cols=38  Identities=16%  Similarity=0.270  Sum_probs=30.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCC--ceEEEEEeecCCHH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHED--KFRVVALAAGSNIT  115 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd--~F~VvaLaagsNv~  115 (353)
                      ||+|+||||.+|+..++.+.+|++  .++++.++..+...
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~g   41 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGV   41 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccc
Confidence            699999999999999998765432  58888887766543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.77  E-value=0.013  Score=50.29  Aligned_cols=32  Identities=31%  Similarity=0.426  Sum_probs=28.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      |+|.|.|+||+||+...+.+.+.  .|+|.++.-
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r   32 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVA   32 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEC
Confidence            78999999999999999988764  699999864

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.60  E-value=0.054  Score=43.19  Aligned_cols=98  Identities=17%  Similarity=0.122  Sum_probs=65.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccch--HHHHHHhhcCCCCcEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLL--DEIKEALANVEEKPEIL  154 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~--~~l~~~l~~~~~~~~v~  154 (353)
                      .+|.|+| +|.||..++.+.+.+.  .+|++..  +|-+++ +.++++..+.+.+.+....  .+..+.+          
T Consensus        28 ~~vlV~G-~G~vG~~~~~~ak~~G--a~vi~v~--~~~~r~-~~a~~~ga~~~~~~~~~~~~~~~~~~~~----------   91 (170)
T d1e3ja2          28 TTVLVIG-AGPIGLVSVLAAKAYG--AFVVCTA--RSPRRL-EVAKNCGADVTLVVDPAKEEESSIIERI----------   91 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT--CEEEEEE--SCHHHH-HHHHHTTCSEEEECCTTTSCHHHHHHHH----------
T ss_pred             CEEEEEc-ccccchhhHhhHhhhc--ccccccc--hHHHHH-HHHHHcCCcEEEeccccccccchhhhhh----------
Confidence            3699998 6999999999998873  6888765  455554 6789999988877654322  2222221          


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                            .+. .-..+|+|+++..+-..+...+..++.|=+|.+
T Consensus        92 ------~~~-~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~  127 (170)
T d1e3ja2          92 ------RSA-IGDLPNVTIDCSGNEKCITIGINITRTGGTLML  127 (170)
T ss_dssp             ------HHH-SSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEE
T ss_pred             ------hcc-cccCCceeeecCCChHHHHHHHHHHhcCCceEE
Confidence                  111 134689999997665566666666665554433

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.35  E-value=0.0089  Score=52.39  Aligned_cols=33  Identities=30%  Similarity=0.456  Sum_probs=29.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .||+|.|.|+||+||+..++.+.+.  .++|.++.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d   47 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLD   47 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEE
Confidence            4789999999999999999998876  68899984

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.0076  Score=50.83  Aligned_cols=34  Identities=24%  Similarity=0.344  Sum_probs=28.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      .|+|.|+||||+||+..++-+-+++.--+|.+++
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~   47 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIG   47 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEe
Confidence            4689999999999999999887765323788876

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.012  Score=51.44  Aligned_cols=30  Identities=27%  Similarity=0.408  Sum_probs=26.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      |||.|.|+||+||+..++.+-+.  .++|++|
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~--g~~V~~l   32 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVI   32 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHT--TCCEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHC--cCEEEEE
Confidence            68999999999999999888765  5788887

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.18  E-value=0.033  Score=46.07  Aligned_cols=45  Identities=22%  Similarity=0.326  Sum_probs=35.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      -|++.|.|+||.||..+-..+.++  ..+|+.  +++|.+.+.+.+.++
T Consensus        23 gK~vlItGasgGIG~~ia~~la~~--G~~V~~--~~r~~~~~~~~~~~~   67 (191)
T d1luaa1          23 GKKAVVLAGTGPVGMRSAALLAGE--GAEVVL--CGRKLDKAQAAADSV   67 (191)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEE--EESSHHHHHHHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhh--ccchhh--cccchHHHHHHHHHH
Confidence            378999999999999999999987  466654  456777776666544

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.12  E-value=0.028  Score=48.43  Aligned_cols=33  Identities=21%  Similarity=0.261  Sum_probs=28.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      +|++.|.||||+||....+-+-+.  .++|+|+.-
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r   33 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIR   33 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHC--cCEEEEEEC
Confidence            478889999999999999988774  799999863

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=95.07  E-value=0.077  Score=45.52  Aligned_cols=64  Identities=28%  Similarity=0.387  Sum_probs=49.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      -|.+.|.|+|+.||..+.+-+.+.  .++|+..  .+|.+.+.+.+++++.+...+ .|-+..+.+++.
T Consensus         5 gK~alItGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~   69 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFARE--GASLVAV--DREERLLAEAVAALEAEAIAVVADVSDPKAVEAV   69 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHH
Confidence            367999999999999999888875  6888753  478899999999999887655 455555555544

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=94.92  E-value=0.021  Score=51.18  Aligned_cols=51  Identities=16%  Similarity=0.317  Sum_probs=38.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEE-EEEee-------------------------cCCHHHHHHHHHhhCCCEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRV-VALAA-------------------------GSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~V-vaLaa-------------------------gsNv~lL~~Q~~eFkPk~V~  130 (353)
                      ||.|.|+||+||....+-+.+..  +++ +++--                         =+|.+.+.+..+.++|++|.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g--~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNT--QDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHC--SCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCC--CCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            69999999999999998887653  333 33310                         14677888888899999887

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.73  E-value=0.061  Score=45.85  Aligned_cols=86  Identities=10%  Similarity=0.145  Sum_probs=57.3

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      .+|.|.|-|+|+=||..+..-+.+....+.|++.  .+|.+++.++.++...+..++ .|-...+.+++...        
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~--~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~--------   71 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIAT--ARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVS--------   71 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEE--ESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHH--------
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEE--eCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHH--------
Confidence            4689999999999999999998887666777764  478888877666555454333 35455555554321        


Q ss_pred             EecHHHHHHHhcCCCCcEEEEe
Q 018600          154 LAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                           -+.+.......|++|+.
T Consensus        72 -----~i~~~~~~~~idilinn   88 (250)
T d1yo6a1          72 -----KVGEIVGSDGLSLLINN   88 (250)
T ss_dssp             -----HHHHHHGGGCCCEEEEC
T ss_pred             -----HHHHHhCCCCeEEEEEc
Confidence                 22333333458888876

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.012  Score=51.39  Aligned_cols=32  Identities=22%  Similarity=0.341  Sum_probs=28.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      +|||.|.|+||+||+..++-+.+.  .++|+++.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d   32 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVD   32 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEe
Confidence            489999999999999999888764  68999984

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=94.61  E-value=0.14  Score=44.09  Aligned_cols=81  Identities=17%  Similarity=0.195  Sum_probs=58.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~  154 (353)
                      -|.+.|.|+|+-||..+..-+.+.  .++|+..  .+|.+.|.+.++++.++...+ .|-...+.+++...         
T Consensus         5 gK~alVTGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~---------   71 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVRE--GARVAIA--DINLEAARATAAEIGPAACAIALDVTDQASIDRCVA---------   71 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHT--TEEEEEE--ESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHH---------
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHH---------
Confidence            378999999999999999888875  6887754  478999999999999887765 35444555554431         


Q ss_pred             ecHHHHHHHhcCCCCcEEEEe
Q 018600          155 AGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                          .+.  .+...+|++||.
T Consensus        72 ----~~~--~~~g~iDilVnn   86 (256)
T d1k2wa_          72 ----ELL--DRWGSIDILVNN   86 (256)
T ss_dssp             ----HHH--HHHSCCCEEEEC
T ss_pred             ----HHH--HHhCCccEEEee
Confidence                111  123468999886

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=94.53  E-value=0.052  Score=44.20  Aligned_cols=78  Identities=13%  Similarity=0.043  Sum_probs=55.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -.+|.|.|++|.+|..++.+.+..  ..+|++.+..  -++ .+.++++..+.++..+.+...+                
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~~--~~~-~~~~~~~Ga~~vi~~~~~~~~~----------------   88 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGS--DEK-IAYLKQIGFDAAFNYKTVNSLE----------------   88 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESS--HHH-HHHHHHTTCSEEEETTSCSCHH----------------
T ss_pred             CCEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCCC--HHH-HHHHHhhhhhhhcccccccHHH----------------
Confidence            357999999999999999999987  5789998743  333 4668888999887654333211                


Q ss_pred             cHHHHHHHhcCCCCcEEEEecc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIV  177 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIv  177 (353)
                         .+.+......+|+|++.+-
T Consensus        89 ---~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          89 ---EALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             ---HHHHHHCTTCEEEEEESSC
T ss_pred             ---HHHHHhhcCCCceeEEecC
Confidence               1222334457999999873

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=94.45  E-value=0.013  Score=51.45  Aligned_cols=33  Identities=30%  Similarity=0.385  Sum_probs=28.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      ||||.|.|+||+||+..++-+.++..+.+|+++
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~   34 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL   34 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEE
Confidence            789999999999999999988776556777775

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.32  E-value=0.024  Score=49.87  Aligned_cols=34  Identities=21%  Similarity=0.193  Sum_probs=28.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS  112 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags  112 (353)
                      +||.|.|+||+||+..++-+.+.  .++|+++.-.+
T Consensus        16 MKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~   49 (363)
T d2c5aa1          16 LKISITGAGGFIASHIARRLKHE--GHYVIASDWKK   49 (363)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCC
Confidence            45999999999999999988874  58999885443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=94.29  E-value=0.11  Score=41.46  Aligned_cols=77  Identities=10%  Similarity=0.095  Sum_probs=54.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeC-ccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRN-ESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~d-e~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      ++|.|.|++|.+|.-++.+.+..  ..+|++.+..  -+++ +.++++..+.+.-.. ++..+++++             
T Consensus        30 ~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s--~~k~-~~~~~lGa~~vi~~~~~d~~~~v~~-------------   91 (179)
T d1qora2          30 EQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGT--AQKA-QSALKAGAWQVINYREEDLVERLKE-------------   91 (179)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESS--HHHH-HHHHHHTCSEEEETTTSCHHHHHHH-------------
T ss_pred             CEEEEEccccccchHHHHHHHHh--CCeEeecccc--hHHH-HHHHhcCCeEEEECCCCCHHHHHHH-------------
Confidence            58999999999999999999986  5788887643  3443 567788888877543 333334443             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVG  178 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG  178 (353)
                             +.....+|+|+++..|
T Consensus        92 -------~t~g~g~d~v~d~~g~  107 (179)
T d1qora2          92 -------ITGGKKVRVVYDSVGR  107 (179)
T ss_dssp             -------HTTTCCEEEEEECSCG
T ss_pred             -------HhCCCCeEEEEeCccH
Confidence                   2333468888888754

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.01  E-value=0.056  Score=47.99  Aligned_cols=32  Identities=22%  Similarity=0.334  Sum_probs=25.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      +| ||.|.|+||+||+..++-+-++. .|+|+++
T Consensus         2 ~M-KVLITG~tGfIGs~lv~~LL~~~-~~~V~~~   33 (383)
T d1gy8a_           2 HM-RVLVCGGAGYIGSHFVRALLRDT-NHSVVIV   33 (383)
T ss_dssp             CC-EEEEETTTSHHHHHHHHHHHHHC-CCEEEEE
T ss_pred             cC-EEEEeCCCcHHHHHHHHHHHHhC-CCEEEEE
Confidence            56 69999999999999888764432 5889887

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.98  E-value=0.035  Score=46.43  Aligned_cols=93  Identities=20%  Similarity=0.342  Sum_probs=64.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|.|.|++|-+|+.++++.+..  .++|++.+...+-   .+.++++..+++.-.++. .   .+              
T Consensus        33 ~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k---~~~~~~lGa~~vi~~~~~-~---~~--------------   89 (176)
T d1xa0a2          33 GPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAE---HDYLRVLGAKEVLAREDV-M---AE--------------   89 (176)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTC---HHHHHHTTCSEEEECC-----------------------
T ss_pred             CEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHH---HHHHHhcccceeeecchh-H---HH--------------
Confidence            47999999999999999999987  7899997755332   345678899988744321 1   11              


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                         ..+......+|+|++.+.| .-+...+..++.|-++.
T Consensus        90 ---~~~~~~~~gvD~vid~vgg-~~~~~~l~~l~~~Griv  125 (176)
T d1xa0a2          90 ---RIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYGGAVA  125 (176)
T ss_dssp             -------CCSCCEEEEEECSTT-TTHHHHHHTEEEEEEEE
T ss_pred             ---HHHHhhccCcCEEEEcCCc-hhHHHHHHHhCCCceEE
Confidence               0111233479999998654 46888888877776654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=93.97  E-value=0.17  Score=43.81  Aligned_cols=65  Identities=15%  Similarity=0.021  Sum_probs=46.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv---~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      .-|++.|.|+|+.||..+..-+.+.  .++|+...  +|-   +++.++++++..+...+ .|-...+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~--G~~V~i~~--r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~   73 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGL--GARVYTCS--RNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKL   73 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHH
Confidence            4578999999999999998887775  67776644  444   45556677777766553 566666666654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.68  E-value=0.07  Score=43.30  Aligned_cols=93  Identities=15%  Similarity=0.094  Sum_probs=58.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCcc-chHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~-~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|+|+ |.||..++.+++...  .+++..+. ++-+ -.+.+++|..+.+.-.+++ ..+++++             
T Consensus        30 ~~VlI~G~-G~iG~~~~~~ak~~g--~~~v~~~~-~~~~-k~~~a~~~Ga~~~i~~~~~~~~~~i~~-------------   91 (174)
T d1f8fa2          30 SSFVTWGA-GAVGLSALLAAKVCG--ASIIIAVD-IVES-RLELAKQLGATHVINSKTQDPVAAIKE-------------   91 (174)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHT--CSEEEEEE-SCHH-HHHHHHHHTCSEEEETTTSCHHHHHHH-------------
T ss_pred             CEEEEeCC-CHHHhhhhhcccccc--cceeeeec-cHHH-HHHHHHHcCCeEEEeCCCcCHHHHHHH-------------
Confidence            47999998 999999999998874  33444333 3333 3567889998777644332 2333332             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                             +. ...+|+|++...+-..+.-++..++.+=++
T Consensus        92 -------~t-~gg~D~vid~~G~~~~~~~~~~~~~~~G~i  123 (174)
T d1f8fa2          92 -------IT-DGGVNFALESTGSPEILKQGVDALGILGKI  123 (174)
T ss_dssp             -------HT-TSCEEEEEECSCCHHHHHHHHHTEEEEEEE
T ss_pred             -------Hc-CCCCcEEEEcCCcHHHHHHHHhcccCceEE
Confidence                   22 225899999865555666555555444444

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=93.64  E-value=0.14  Score=43.96  Aligned_cols=64  Identities=22%  Similarity=0.186  Sum_probs=44.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHH---HHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLL---ADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL---~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+ +.++++-+.+   .+++++...+...+ .|-...+..+..
T Consensus         7 K~alITGas~GIG~aia~~la~~--G~~Vv-i~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~   74 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRR--GASVV-VNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVAL   74 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHT--TCEEE-EEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEE-EEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHH
Confidence            57999999999999999888775  78886 6667775555   45555566666554 455545555543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.62  E-value=0.065  Score=41.05  Aligned_cols=42  Identities=17%  Similarity=0.200  Sum_probs=32.8

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      ||+|+|.||.||+..-..+.+.  .++|+-.  ++|-+++.+...+
T Consensus         2 ki~vigGaG~iG~alA~~la~~--G~~V~l~--~R~~e~~~~l~~~   43 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATL--GHEIVVG--SRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTT--TCEEEEE--ESSHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHH
Confidence            5999999999999999999986  7788754  4677766555444

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.59  E-value=0.095  Score=43.05  Aligned_cols=79  Identities=13%  Similarity=0.012  Sum_probs=53.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      +.|.|.|++|.||+.++++.+...-+  ++..+. ++-+...+.++++..+.+.-..++...+                 
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~--~vi~~~-~~~e~~~~l~~~~gad~vi~~~~~~~~~-----------------   91 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCS--RVVGIC-GTQEKCLFLTSELGFDAAVNYKTGNVAE-----------------   91 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCS--EEEEEE-SSHHHHHHHHHHSCCSEEEETTSSCHHH-----------------
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCc--ceeccc-chHHHHhhhhhcccceEEeeccchhHHH-----------------
Confidence            47999999999999999999987432  333333 3457777788899999887654443322                 


Q ss_pred             HHHHHHHhcCCCCcEEEEeccC
Q 018600          157 EQGVIEAARHPDAVTVVTGIVG  178 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG  178 (353)
                        -+.++. ...+|+|++.+-|
T Consensus        92 --~~~~~~-~~GvDvv~D~vGg  110 (187)
T d1vj1a2          92 --QLREAC-PGGVDVYFDNVGG  110 (187)
T ss_dssp             --HHHHHC-TTCEEEEEESSCH
T ss_pred             --HHHHHh-ccCceEEEecCCc
Confidence              122223 3468999988744

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.55  E-value=0.043  Score=43.93  Aligned_cols=92  Identities=17%  Similarity=0.183  Sum_probs=56.3

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc-hHHHHHHhhcCCCCcEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL-LDEIKEALANVEEKPEIL  154 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~-~~~l~~~l~~~~~~~~v~  154 (353)
                      ..+|.|+|++|.||..++.+++...- -+|++..  .|-++ .+.++++..+.+.-.++.. .++++             
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~-~~V~~~~--~~~~~-~~~~~~~Ga~~~i~~~~~~~~~~~~-------------   90 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVD--VREEA-VEAAKRAGADYVINASMQDPLAEIR-------------   90 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEE--SSHHH-HHHHHHHTCSEEEETTTSCHHHHHH-------------
T ss_pred             CCEEEEEeccccceeeeeeccccccc-ccccccc--cchhh-HHHHHHcCCceeeccCCcCHHHHHH-------------
Confidence            35799999999999999999997632 3555544  44444 4567888888776544332 22222             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                             +......+|+|++...+-..+.-.+.+++.
T Consensus        91 -------~~~~~~~~d~vid~~g~~~~~~~a~~~l~~  120 (170)
T d1jvba2          91 -------RITESKGVDAVIDLNNSEKTLSVYPKALAK  120 (170)
T ss_dssp             -------HHTTTSCEEEEEESCCCHHHHTTGGGGEEE
T ss_pred             -------HHhhcccchhhhcccccchHHHhhhhhccc
Confidence                   222233589999876543334333333333

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=93.39  E-value=0.046  Score=44.16  Aligned_cols=92  Identities=13%  Similarity=0.129  Sum_probs=58.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|.|.|+ |.+|..++.+++.+-- -.|++.  .+|-++ .+.++++..+.+.-.+++..++..+              
T Consensus        34 ~~vli~Ga-G~vG~~~~~~a~~~g~-~~vv~~--~~~~~k-~~~~~~~ga~~~i~~~~~~~~~~~~--------------   94 (172)
T d1h2ba2          34 AYVAIVGV-GGLGHIAVQLLKVMTP-ATVIAL--DVKEEK-LKLAERLGADHVVDARRDPVKQVME--------------   94 (172)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCC-CEEEEE--ESSHHH-HHHHHHTTCSEEEETTSCHHHHHHH--------------
T ss_pred             CEEEEeCC-ChHHHHHHHHHHhhcC-cccccc--cchhHH-HHHHhhcccceeecCcccHHHHHHH--------------
Confidence            46889886 9999999999987532 234332  344444 4578899999887665543333322              


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCC
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGK  193 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK  193 (353)
                            ......+|+|+++..+-..+...+..++.|=
T Consensus        95 ------~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G  125 (172)
T d1h2ba2          95 ------LTRGRGVNVAMDFVGSQATVDYTPYLLGRMG  125 (172)
T ss_dssp             ------HTTTCCEEEEEESSCCHHHHHHGGGGEEEEE
T ss_pred             ------hhCCCCceEEEEecCcchHHHHHHHHHhCCC
Confidence                  2223368999998776665655555444443

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=93.38  E-value=0.21  Score=42.83  Aligned_cols=64  Identities=19%  Similarity=0.257  Sum_probs=49.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL  144 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l  144 (353)
                      -|.+.|.|+|+-||..+..-+.+.  .++|+..  .+|-+.|.+.+++.+.+++. .|-...+++++.+
T Consensus         5 gK~~lITGas~GIG~aia~~l~~~--G~~V~~~--~r~~~~l~~~~~~~~~~~~~-~Dv~~~~~v~~~~   68 (242)
T d1ulsa_           5 DKAVLITGAAHGIGRATLELFAKE--GARLVAC--DIEEGPLREAAEAVGAHPVV-MDVADPASVERGF   68 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHTTTCEEEE-CCTTCHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHcCCeEEE-EecCCHHHHHHHH
Confidence            378999999999999999988876  6787764  47889999999998876654 4655555665543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=93.33  E-value=0.25  Score=42.26  Aligned_cols=85  Identities=15%  Similarity=0.135  Sum_probs=58.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |.+.|.|+++-||..+..-+.+.  .++|+..  .+|-+.|.+.+++++.+...+ .|-...+.+++.+.          
T Consensus         5 K~alITGas~GIG~a~a~~l~~~--G~~Vv~~--~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~----------   70 (243)
T d1q7ba_           5 KIALVTGASRGIGRAIAETLAAR--GAKVIGT--ATSENGAQAISDYLGANGKGLMLNVTDPASIESVLE----------   70 (243)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHT--TCEEEEE--ESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHH----------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEE--eCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhh----------
Confidence            67889999999999999888875  6888653  478899999999887765443 34444445544331          


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAG  181 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aG  181 (353)
                         .+.  .+...+|++||. +|...
T Consensus        71 ---~~~--~~~g~iDilVnn-Ag~~~   90 (243)
T d1q7ba_          71 ---KIR--AEFGEVDILVNN-AGITR   90 (243)
T ss_dssp             ---HHH--HHTCSCSEEEEC-CCCCC
T ss_pred             ---hhh--cccCCcceehhh-hhhcc
Confidence               111  234468998876 34443

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.25  E-value=0.37  Score=41.15  Aligned_cols=76  Identities=18%  Similarity=0.155  Sum_probs=53.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      |++.|.|+++-||..+-.-+.+.  .++|+..  .+|-+.|.+.+++++--.....|-...+..++.+            
T Consensus         8 K~~lITGas~GIG~aia~~la~~--G~~V~~~--~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~------------   71 (244)
T d1pr9a_           8 RRVLVTGAGKGIGRGTVQALHAT--GARVVAV--SRTQADLDSLVRECPGIEPVCVDLGDWEATERAL------------   71 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHH------------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEE--ECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHH------------
Confidence            78999999999999998888775  6787764  4788999888888764333444544444444332            


Q ss_pred             HHHHHHHhcCCCCcEEEEe
Q 018600          157 EQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~A  175 (353)
                             .+...+|++||.
T Consensus        72 -------~~~g~iDilVnn   83 (244)
T d1pr9a_          72 -------GSVGPVDLLVNN   83 (244)
T ss_dssp             -------TTCCCCCEEEEC
T ss_pred             -------HHhCCceEEEec
Confidence                   122368999986

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=93.24  E-value=0.32  Score=41.73  Aligned_cols=82  Identities=13%  Similarity=0.184  Sum_probs=54.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH---HHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT---LLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~---lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~  152 (353)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+. ..+++-+   .+.+++++...+..++ .|-...+.+++.+.       
T Consensus        19 K~~lITGas~GIG~aia~~la~~--Ga~Vvi-~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~-------   88 (272)
T d1g0oa_          19 KVALVTGAGRGIGREMAMELGRR--GCKVIV-NYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE-------   88 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHT--TCEEEE-EESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEE-EeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHH-------
Confidence            67999999999999999988876  677765 4445444   4555566667777665 45555555555432       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            -+.+.  ....|++|+..
T Consensus        89 ------~~~~~--~g~idilV~na  104 (272)
T d1g0oa_          89 ------EAVKI--FGKLDIVCSNS  104 (272)
T ss_dssp             ------HHHHH--HSCCCEEEECC
T ss_pred             ------HHHHH--hCCCCcccccc
Confidence                  12222  23688888875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=93.09  E-value=0.063  Score=43.66  Aligned_cols=51  Identities=18%  Similarity=0.241  Sum_probs=38.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      -++|.|.|++|.||..++.+.+..  ..+|++.+.+.  ++ .+.++++..+.+.-
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~--~~-~~~~~~lGa~~~i~   78 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRP--EK-LALPLALGAEEAAT   78 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSG--GG-SHHHHHTTCSEEEE
T ss_pred             CCEEEEEeccccchhhhhhhhccc--ccccccccccc--cc-cccccccccceeee
Confidence            357999999999999999999987  46888877433  22 24567788888763

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=93.01  E-value=0.078  Score=46.48  Aligned_cols=32  Identities=22%  Similarity=0.419  Sum_probs=27.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      -|+|.|.|+||+||+..++-+-++  .|+|+|+.
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~v   42 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTA   42 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEe
Confidence            378999999999999999877665  69999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=92.96  E-value=0.23  Score=43.22  Aligned_cols=63  Identities=17%  Similarity=0.292  Sum_probs=49.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      |.+.|.|+++-||..+..-+.+.  .++|+..  .+|-+.|.+..+++..+...+ .|-...+.+++.
T Consensus         6 K~alITGas~GIG~aia~~la~~--Ga~V~i~--~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~   69 (276)
T d1bdba_           6 EAVLITGGASGLGRALVDRFVAE--GAKVAVL--DKSAERLAELETDHGDNVLGIVGDVRSLEDQKQA   69 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHcCCCeeEEecccccHHHHHHH
Confidence            78999999999999999888876  6888764  478999999999998776554 455555555544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.94  E-value=0.24  Score=42.67  Aligned_cols=63  Identities=14%  Similarity=0.014  Sum_probs=47.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      |.+.|.|+|+-||..+..-+.+.  .++|+..  .+|-+.+.+.+++++.+...+ .|-...+.+++.
T Consensus         7 K~alITGas~GIG~aia~~la~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   70 (244)
T d1nffa_           7 KVALVSGGARGMGASHVRAMVAE--GAKVVFG--DILDEEGKAMAAELADAARYVHLDVTQPAQWKAA   70 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHH
Confidence            77999999999999999888875  6887653  467899999999987666554 344444445443

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=92.88  E-value=0.15  Score=41.61  Aligned_cols=94  Identities=15%  Similarity=0.206  Sum_probs=60.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCcc-chHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES-LLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~-~~~~l~~~l~~~~~~~~v~~  155 (353)
                      .+|+|.|+ |-||..++.+++..- -.+|++..  +|-++ .+.++++..+.++-.+++ ..+++++             
T Consensus        29 ~~VlI~Ga-G~vGl~~~q~ak~~G-a~~Vi~~d--~~~~r-~~~a~~lGa~~~i~~~~~~~~~~v~~-------------   90 (174)
T d1jqba2          29 SSVVVIGI-GAVGLMGIAGAKLRG-AGRIIGVG--SRPIC-VEAAKFYGATDILNYKNGHIEDQVMK-------------   90 (174)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTT-CSCEEEEC--CCHHH-HHHHHHHTCSEEECGGGSCHHHHHHH-------------
T ss_pred             CEEEEEcC-Ccchhhhhhhhhccc-cccccccc--chhhh-HHHHHhhCccccccccchhHHHHHHH-------------
Confidence            37999997 999999999999752 22465543  45455 567888998887644322 2222332             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                             +.....+|+|+++.-+...+.-.+.+++.+=++
T Consensus        91 -------~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~i  123 (174)
T d1jqba2          91 -------LTNGKGVDRVIMAGGGSETLSQAVKMVKPGGII  123 (174)
T ss_dssp             -------HTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEE
T ss_pred             -------HhhccCcceEEEccCCHHHHHHHHHHHhcCCEE
Confidence                   222345899999976666666666665544433

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.88  E-value=0.29  Score=41.40  Aligned_cols=85  Identities=9%  Similarity=0.119  Sum_probs=50.6

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHh-CCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCC
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAE-HEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEE  149 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~-~pd~F~VvaLaagsNv---~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~  149 (353)
                      +||+|.|-|||+=||..+.+.+.+ ....++|+..+  +|.   +.+.+..+ ..++..++ .|-...+..++..     
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~--r~~~~~~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~-----   72 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTC--RNREQAKELEDLAK-NHSNIHILEIDLRNFDAYDKLV-----   72 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEE--SCTTSCHHHHHHHH-HCTTEEEEECCTTCGGGHHHHH-----
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEE--CCHHHHHHHHHHHh-cCCcEEEEEEEeccHHHHHHHH-----
Confidence            489999999999999999887754 34578887754  343   34443333 34555443 3433333333322     


Q ss_pred             CcEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          150 KPEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       150 ~~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                              +.+.++......|++||-
T Consensus        73 --------~~i~~~~~~~~iDiLvnN   90 (248)
T d1snya_          73 --------ADIEGVTKDQGLNVLFNN   90 (248)
T ss_dssp             --------HHHHHHHGGGCCSEEEEC
T ss_pred             --------hhhHHHhhcCCcceEEee
Confidence                    122333444568888875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=92.85  E-value=0.21  Score=41.98  Aligned_cols=55  Identities=18%  Similarity=0.190  Sum_probs=39.3

Q ss_pred             CCCeeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           74 DGPKPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        74 ~~~k~I~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      -.-|++.|.|++||  ||..+-.-+.+.  ..+|+ |+..++.++..+..+++..+...+
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vi-l~~~~~~~~~~~~~~~~~~~~~~~   60 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLV-LTGFDRLRLIQRITDRLPAKAPLL   60 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEE-EEECSCHHHHHHHHTTSSSCCCEE
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEE-EEeCChHHHHHHHHHHcCCceeeE
Confidence            34578999999876  999987777765  67764 566666665566677776655443

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=92.72  E-value=0.061  Score=40.01  Aligned_cols=42  Identities=21%  Similarity=0.438  Sum_probs=34.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLAD  119 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~  119 (353)
                      ..+|.|.|+||.+|..++++.+..  .++|++.++.. |.+.+.+
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~~k~~~~~~   74 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLKS   74 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHH
Confidence            347999999999999999999987  78999998754 6666543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=92.58  E-value=0.32  Score=42.10  Aligned_cols=63  Identities=11%  Similarity=0.094  Sum_probs=47.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      |.+.|.|+|+-||..+..-+.+.  .++|+..  .+|-+.|.+.++++..+...+ .|-...+++++.
T Consensus         6 K~alVTGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   69 (254)
T d1hdca_           6 KTVIITGGARGLGAEAARQAVAA--GARVVLA--DVLDEEGAATARELGDAARYQHLDVTIEEDWQRV   69 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHH
Confidence            67999999999999999988875  6787554  368899999999997765554 444444445443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=92.51  E-value=0.14  Score=41.09  Aligned_cols=87  Identities=15%  Similarity=0.188  Sum_probs=58.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      -.+|.|+|+ |.||..++.+.+..  ..++++.+.+.  +++ +.++++..+.+.-.++...                  
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~--Ga~~i~~~~~~--~~~-~~a~~lGad~~i~~~~~~~------------------   86 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAM--GAHVVAFTTSE--AKR-EAAKALGADEVVNSRNADE------------------   86 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHT--TCEEEEEESSG--GGH-HHHHHHTCSEEEETTCHHH------------------
T ss_pred             CCEEEEecc-chHHHHHHHHhhcc--cccchhhccch--hHH-HHHhccCCcEEEECchhhH------------------
Confidence            357999996 99999999999987  67888765443  333 5788999988765332110                  


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAG  192 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~g  192 (353)
                           . ......+|.|++...+-..+...+..++.|
T Consensus        87 -----~-~~~~~~~D~vid~~g~~~~~~~~~~~l~~~  117 (168)
T d1uufa2          87 -----M-AAHLKSFDFILNTVAAPHNLDDFTTLLKRD  117 (168)
T ss_dssp             -----H-HTTTTCEEEEEECCSSCCCHHHHHTTEEEE
T ss_pred             -----H-HHhcCCCceeeeeeecchhHHHHHHHHhcC
Confidence                 0 011135899999987777777666544333

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.50  E-value=0.39  Score=41.35  Aligned_cols=65  Identities=17%  Similarity=0.154  Sum_probs=47.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHh
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL  144 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l  144 (353)
                      -|.+.|.|+|+-||..+..-+.+.  .++|+..  .+|-+.|.+..++..--..+..|-...+.+++..
T Consensus         6 GK~alITGas~GIG~aia~~la~~--Ga~V~i~--~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNS--GARVVIC--DKDESGGRALEQELPGAVFILCDVTQEDDVKTLV   70 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHH
Confidence            367999999999999999888875  6787764  4788888888887753344445655555665543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.39  E-value=0.57  Score=39.94  Aligned_cols=62  Identities=18%  Similarity=0.120  Sum_probs=44.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      |++.|.|+++-||..+..-+.+.  .++|+...  +|-+.|.+..++..--.....|-...+.+++
T Consensus         6 K~alITGas~GIG~aia~~la~~--Ga~V~~~~--r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~   67 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHAS--GAKVVAVT--RTNSDLVSLAKECPGIEPVCVDLGDWDATEK   67 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHSTTCEEEECCTTCHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHhcCCCeEEEEeCCCHHHHHH
Confidence            67999999999999999888875  67877653  6788888888887533333345444444443

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.32  E-value=0.72  Score=38.19  Aligned_cols=106  Identities=18%  Similarity=0.228  Sum_probs=69.0

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .||+|-| .|=||+..++.+.++|| ++||++.-.+.-.... ...++.-+... .+.+....+.+.    +  ..+- |
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~d-ieiVaINd~~~~~~~~-~l~~~~~~~~~-~~~~~~~~~~~~----~--~~~~-~   71 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDD-MELIGITKTKPDFEAY-RAKELGIPVYA-ASEEFIPRFEKE----G--FEVA-G   71 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTT-EEEEEEEESSCSHHHH-HHHHTTCCEEE-SSGGGHHHHHHH----T--CCCS-C
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCC-ceEEEEecCCChHHHH-HhhhcCceeec-ccccceeeeccc----C--cccc-c
Confidence            5899999 59999999999998765 9999998765533333 34444433333 334444444432    1  1111 1


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEee
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIAL  197 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaL  197 (353)
                        .+.++.  .++|+|+.+--.+-..+-.-.-+++|++..+
T Consensus        72 --~~~~~~--~~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi  108 (172)
T d2czca2          72 --TLNDLL--EKVDIIVDATPGGIGAKNKPLYEKAGVKAIF  108 (172)
T ss_dssp             --BHHHHH--TTCSEEEECCSTTHHHHHHHHHHHHTCEEEE
T ss_pred             --hhhhhh--ccCCEEEECCCCCCCHHHHHHHHHcCCCEEE
Confidence              244443  3699999998777777777777899977554

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=92.31  E-value=0.15  Score=42.74  Aligned_cols=57  Identities=21%  Similarity=0.282  Sum_probs=39.8

Q ss_pred             ccccCCCCCCeeEEEEecCChHhHHHHHHHHhC-----CCceEEEEEeecCCHHHHHHHHHh
Q 018600           67 ETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEH-----EDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        67 ~~~~~~~~~~k~I~ILGSTGSIGtqTLdVI~~~-----pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      |+..++|..+.||+|.||+|.||.+.+--+.+-     .....+.-+--..+.+.|..++.+
T Consensus        15 ~~~~~~~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~md   76 (175)
T d7mdha1          15 EDKTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAME   76 (175)
T ss_dssp             ------CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH
T ss_pred             chhhhccCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhh
Confidence            345688889999999999999999998777652     345667777777777777776654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.94  E-value=0.6  Score=40.04  Aligned_cols=87  Identities=24%  Similarity=0.223  Sum_probs=55.9

Q ss_pred             cCCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEE-EeCccchHHHHHHhh
Q 018600           70 RKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVA-VRNESLLDEIKEALA  145 (353)
Q Consensus        70 ~~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~-i~de~~~~~l~~~l~  145 (353)
                      ||+..| |.+.|-|+|+-||..+-.-..+.  .++|+..  .+|.+.|.+   +++...++... ..|-...+.+++.++
T Consensus         2 ~~~l~G-kv~lITGas~GIG~~ia~~la~~--G~~V~l~--~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   76 (244)
T d1yb1a_           2 RKSVTG-EIVLITGAGHGIGRLTAYEFAKL--KSKLVLW--DINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAK   76 (244)
T ss_dssp             CCCCTT-CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCC-CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH
Confidence            345555 56889999999999999988876  6777663  357665554   45566666554 345555555554432


Q ss_pred             cCCCCcEEEecHHHHHHHhcCCCCcEEEEec
Q 018600          146 NVEEKPEILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       146 ~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                                   -+  ..+..++|++|+..
T Consensus        77 -------------~i--~~~~g~idilinna   92 (244)
T d1yb1a_          77 -------------KV--KAEIGDVSILVNNA   92 (244)
T ss_dssp             -------------HH--HHHTCCCSEEEECC
T ss_pred             -------------HH--HHHcCCCceeEeec
Confidence                         11  12455788888763

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=91.70  E-value=0.81  Score=39.17  Aligned_cols=81  Identities=11%  Similarity=0.141  Sum_probs=51.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH----hhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK----RFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~----eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      |.+.|.|+||-||..+..-+.+.  .++|+..  .+|-+.+.+.++    ++..+..++ .|-...+.+++...      
T Consensus        26 K~alITGas~GIG~aiA~~la~~--Ga~Vii~--~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~------   95 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSL--GAQCVIA--SRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS------   95 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEE--ECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhh------
Confidence            67999999999999999888875  6888764  366666554443    445555444 45554555544321      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+  ..+...+|++|+..
T Consensus        96 -------~~--~~~~g~iDilvnnA  111 (294)
T d1w6ua_          96 -------EL--IKVAGHPNIVINNA  111 (294)
T ss_dssp             -------HH--HHHTCSCSEEEECC
T ss_pred             -------hh--hhhccccchhhhhh
Confidence                   11  22345688888764

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.63  E-value=0.055  Score=43.75  Aligned_cols=126  Identities=11%  Similarity=0.099  Sum_probs=78.3

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCC--ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHED--KFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd--~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      .++.+|+|+|. |.+|+.-+..+.+.++  .+.+++....+          ++..     .                ...
T Consensus         5 ~~k~kv~iIG~-G~~g~~h~~~l~~~~~~~~~~~~~~~~~~----------~~~~-----~----------------~~~   52 (172)
T d1lc0a1           5 SGKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRR----------ELGS-----L----------------DEV   52 (172)
T ss_dssp             CCSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSS----------CCCE-----E----------------TTE
T ss_pred             CCCcEEEEEcC-CHHHHHHHHHHHhCCCCcEEEEEeccchH----------HHHH-----h----------------hcc
Confidence            34568999996 9999998888887652  34444432211          0000     0                001


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccc--eeecccchhHHhhhcCCeEe-----ec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKET--LIAGGPFVLPLAHKHNIKIL-----PA  224 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKES--LV~aG~li~~~a~~~~~~Il-----PV  224 (353)
                      ..+    .+.++...+++|.|+.+..--.-..-+..|+++||.|.+ -|=.  =+.-+.-+.++++++|..+.     --
T Consensus        53 ~~~----~~~e~l~~~~iD~V~I~tp~~~H~~~~~~al~~gk~V~~-EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~  127 (172)
T d1lc0a1          53 RQI----SLEDALRSQEIDVAYICSESSSHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQKGRVLHEEHVELL  127 (172)
T ss_dssp             EBC----CHHHHHHCSSEEEEEECSCGGGHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGG
T ss_pred             CcC----CHHHHHhCCCcchhhhcccccccccccccccccchhhhc-CCCccccHHHHHHHHHHHHHcCCeEEEecHHHh
Confidence            111    356677778999999888777778889999999999763 2210  12234556778888886543     23


Q ss_pred             CCchhHHHHhhc
Q 018600          225 DSEHSAIFQCIQ  236 (353)
Q Consensus       225 DSEHsAIfQ~L~  236 (353)
                      +..+..+.+.+.
T Consensus       128 ~p~~~~~k~~i~  139 (172)
T d1lc0a1         128 KNIFLKDQDIFV  139 (172)
T ss_dssp             TTHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH
Confidence            555566666554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=91.58  E-value=0.084  Score=45.67  Aligned_cols=32  Identities=22%  Similarity=0.449  Sum_probs=26.3

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEee
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAA  110 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaa  110 (353)
                      ||.|.|+||+||+..++-+.+.. .++|++|.-
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g-~~~V~~ld~   33 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLRED-HYEVYGLDI   33 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHST-TCEEEEEES
T ss_pred             EEEEECCCcHHHHHHHHHHHHCC-CCEEEEEeC
Confidence            69999999999999988776553 478999853

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.57  E-value=0.49  Score=40.64  Aligned_cols=63  Identities=14%  Similarity=0.101  Sum_probs=47.6

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEe-CccchHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR-NESLLDEIKE  142 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~-de~~~~~l~~  142 (353)
                      -|.+.|.|+++-||..+..-+.+.  .++|+..  .+|-+.|.+.++++..+...+. |-...+..++
T Consensus         6 gK~alITGas~GIG~aia~~la~~--Ga~V~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~   69 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGE--GAKVAFS--DINEAAGQQLAAELGERSMFVRHDVSSEADWTL   69 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--CSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHH
Confidence            367999999999999999888875  6777643  4788999999999988777653 4444444444

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=91.56  E-value=0.44  Score=40.08  Aligned_cols=72  Identities=17%  Similarity=0.263  Sum_probs=47.3

Q ss_pred             cCCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-----CHHHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           70 RKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-----NITLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        70 ~~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-----Nv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      +..|...+.+.|.|+||-||..+..-+.+.-  .+.+.|++++     ..+.+.++++...++..++ .|-...+.+++.
T Consensus         3 ~~~~~p~gt~lVTGgs~GIG~a~a~~la~~G--a~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~   80 (259)
T d2fr1a1           3 DDEWKPTGTVLVTGGTGGVGGQIARWLARRG--APHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVREL   80 (259)
T ss_dssp             SCCCCCCSEEEEETTTSHHHHHHHHHHHHHT--CSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccccCCcCEEEEECCCcHHHHHHHHHHHHCC--CCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHh
Confidence            3567778899999999999999998887753  4345565543     2455555556666665554 354445555543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.12  E-value=0.18  Score=39.57  Aligned_cols=94  Identities=17%  Similarity=0.203  Sum_probs=58.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchH-HHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLD-EIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~-~l~~~l~~~~~~~~v~~  155 (353)
                      .+|.|.|+ |+||..++.+.+.+.  .+|++..  +|-+++ +.++++.++.+....++... .+++             
T Consensus        29 ~~vlv~G~-G~iG~~a~~~a~~~g--~~v~~~~--~~~~r~-~~~k~~Ga~~~~~~~~~~~~~~~~~-------------   89 (168)
T d1rjwa2          29 EWVAIYGI-GGLGHVAVQYAKAMG--LNVVAVD--IGDEKL-ELAKELGADLVVNPLKEDAAKFMKE-------------   89 (168)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTT--CEEEEEC--SCHHHH-HHHHHTTCSEEECTTTSCHHHHHHH-------------
T ss_pred             CEEEEeec-ccchhhhhHHHhcCC--CeEeccC--CCHHHh-hhhhhcCcceecccccchhhhhccc-------------
Confidence            47888886 999999999999874  4676654  445554 57899999988755443322 2222             


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeee
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALA  198 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLA  198 (353)
                             ..  .+.|.+|...+|-..+...+.+++.|-++.+.
T Consensus        90 -------~~--~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~  123 (168)
T d1rjwa2          90 -------KV--GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLV  123 (168)
T ss_dssp             -------HH--SSEEEEEESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred             -------cc--CCCceEEeecCCHHHHHHHHHHhccCCceEec
Confidence                   12  12344444445555566666666665555443

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=91.08  E-value=0.63  Score=39.26  Aligned_cols=83  Identities=18%  Similarity=0.151  Sum_probs=49.5

Q ss_pred             CeeEEEEecCCh--HhHHHHHHHHhCCCceEEEEEeecCC--HHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGS--IGTQTLDIVAEHEDKFRVVALAAGSN--ITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGS--IGtqTLdVI~~~pd~F~VvaLaagsN--v~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~  151 (353)
                      -|++.|.|+||+  ||..+-.-+.+.  .++|+ ++.++.  .+...++..+.....++-.|-...+.+++.+.      
T Consensus         8 gK~alITGas~~~GIG~aiA~~la~~--Ga~V~-i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~------   78 (256)
T d1ulua_           8 GKKALVMGVTNQRSLGFAIAAKLKEA--GAEVA-LSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFA------   78 (256)
T ss_dssp             TCEEEEESCCCSSSHHHHHHHHHHHT--TCEEE-EEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHC--CCEEE-EEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHH------
Confidence            367999999985  999998888875  67774 555442  22333344444444444556555555554432      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEec
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                             .+.+  +....|++||..
T Consensus        79 -------~~~~--~~g~iDilVnna   94 (256)
T d1ulua_          79 -------GVKE--AFGGLDYLVHAI   94 (256)
T ss_dssp             -------HHHH--HHSSEEEEEECC
T ss_pred             -------HHHH--hcCCceEEEecc
Confidence                   1122  234688888754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=90.58  E-value=0.97  Score=37.98  Aligned_cols=86  Identities=10%  Similarity=0.002  Sum_probs=52.4

Q ss_pred             CeeEEEEecCC--hHhHHHHHHHHhCCCceEEEEEeecCCH-HHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTG--SIGTQTLDIVAEHEDKFRVVALAAGSNI-TLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTG--SIGtqTLdVI~~~pd~F~VvaLaagsNv-~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      -|++.|.|++|  .||..+-.-+.+.  .++|+...-+... +.+.+...+.....+...|-......++.+.       
T Consensus         5 gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (274)
T d2pd4a1           5 GKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYN-------   75 (274)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHH-------
Confidence            47899999988  4999999888865  7888865433322 3444444555554555555555555544331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccC
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVG  178 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG  178 (353)
                            -+.  .....+|++|+....
T Consensus        76 ------~~~--~~~g~id~lV~nag~   93 (274)
T d2pd4a1          76 ------SVK--KDLGSLDFIVHSVAF   93 (274)
T ss_dssp             ------HHH--HHTSCEEEEEECCCC
T ss_pred             ------HHH--HHcCCCCeEEeeccc
Confidence                  112  234568888876443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.46  E-value=0.33  Score=39.20  Aligned_cols=48  Identities=31%  Similarity=0.504  Sum_probs=35.6

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe-ecCCHHHHHHHHHhhCCCEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA-AGSNITLLADQVKRFKPQVVA  130 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa-agsNv~lL~~Q~~eFkPk~V~  130 (353)
                      ||+|.|+||=.|+..++.+.+.++ |++++.. .+.+...+    ..-+++.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~-~~l~~~~d~~~~~~~~----~~~~~DvvI   49 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADD-LTLSAELDAGDPLSLL----TDGNTEVVI   49 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTT-SEEEEEECTTCCTHHH----HTTTCSEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEecCCchhhh----ccccCCEEE
Confidence            699999999999999999998876 9988764 34444433    233566655

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=90.36  E-value=0.84  Score=38.84  Aligned_cols=86  Identities=15%  Similarity=0.125  Sum_probs=58.5

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEEEe
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |.+.|.|+|+=||..+..-+.+.  .++|+. +..++.+++.+.+++...+...+ .|-...++++..+.          
T Consensus         6 KvalVTGas~GIG~aia~~la~~--Ga~V~~-~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~----------   72 (247)
T d2ew8a1           6 KLAVITGGANGIGRAIAERFAVE--GADIAI-ADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGK----------   72 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEE-EESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH----------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEE-EECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHH----------
Confidence            67999999999999999888875  677765 45566677788888888777665 35455555554432          


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccC
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAG  181 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aG  181 (353)
                         .+.  .+...+|++||. +|...
T Consensus        73 ---~~~--~~~G~iDilVnn-AG~~~   92 (247)
T d2ew8a1          73 ---QVI--STFGRCDILVNN-AGIYP   92 (247)
T ss_dssp             ---HHH--HHHSCCCEEEEC-CCCCC
T ss_pred             ---HHH--HHcCCCCEEEEC-CCCCC
Confidence               111  123468998886 45443

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.11  E-value=0.9  Score=38.68  Aligned_cols=80  Identities=19%  Similarity=0.123  Sum_probs=50.7

Q ss_pred             eeE-EEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           77 KPI-SVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        77 k~I-~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      ||| .|.|+|+=||..+-.-+.+.  .++|+..  .+|-+.|.+.   +++...+...+ .|-...+++++...      
T Consensus         1 KKValITGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~------   70 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIA--DYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVE------   70 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH------
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHH------
Confidence            566 67799999999998888775  6777653  3566665544   45555666554 46555555555432      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEe
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                             .+.  .+...+|++||.
T Consensus        71 -------~~~--~~~g~iDilVnn   85 (255)
T d1gega_          71 -------QAR--KTLGGFDVIVNN   85 (255)
T ss_dssp             -------HHH--HHTTCCCEEEEC
T ss_pred             -------HHH--HHhCCccEEEec
Confidence                   111  223468888875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=89.72  E-value=0.71  Score=39.83  Aligned_cols=64  Identities=19%  Similarity=0.267  Sum_probs=44.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCH---HHHHHHHHhhCCCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNI---TLLADQVKRFKPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv---~lL~~Q~~eFkPk~V~i-~de~~~~~l~~~  143 (353)
                      |.+.|.|+++-||..+..-+.+.  .++|+. .++++-   +.+.++++++.++...+ .|-...+++++.
T Consensus         8 K~alITGas~GIG~aia~~la~~--G~~Vv~-~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~   75 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATE--KAKVVV-NYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINL   75 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT--TCEEEE-EESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEE-EeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            67999999999999998888875  677765 455554   45566677777776654 354444555543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=89.65  E-value=1  Score=38.56  Aligned_cols=80  Identities=18%  Similarity=0.142  Sum_probs=50.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~  152 (353)
                      |.+.|.|+|+-||..+-.-+.+.  .++|+..  ++|-+.|.+   ++++...+..++ .|-...+.+++.+.       
T Consensus         6 K~alITGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~-------   74 (260)
T d1zema1           6 KVCLVTGAGGNIGLATALRLAEE--GTAIALL--DMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVD-------   74 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHH-------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH-------
Confidence            57999999999999998888776  6777653  356655544   445555555443 45555555555432       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEe
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                            .+.  .+...+|++||.
T Consensus        75 ------~~~--~~~g~iDilVnn   89 (260)
T d1zema1          75 ------SVV--RDFGKIDFLFNN   89 (260)
T ss_dssp             ------HHH--HHHSCCCEEEEC
T ss_pred             ------HHH--HHhCCCCeehhh
Confidence                  111  223468999875

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.08  E-value=0.77  Score=39.37  Aligned_cols=84  Identities=17%  Similarity=0.117  Sum_probs=52.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHH---HHhhCCCEEEE-eCccchHHHHHHhhcCCCCcE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ---VKRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q---~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~  152 (353)
                      |.+.|.|+|+-||..+..-+.+.  .++|+...  +|.+.|.+.   +++..++...+ .|-...+.+++...       
T Consensus        12 K~alITGas~GIG~aia~~la~~--Ga~V~~~~--r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~-------   80 (255)
T d1fmca_          12 KCAIITGAGAGIGKEIAITFATA--GASVVVSD--INADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD-------   80 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-------
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH-------
Confidence            78999999999999998888765  68876643  566665554   45555666554 34444445544331       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCcc
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCA  180 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~a  180 (353)
                            .+.+  +...+|++|+. +|..
T Consensus        81 ------~~~~--~~g~iDilvnn-AG~~   99 (255)
T d1fmca_          81 ------FAIS--KLGKVDILVNN-AGGG   99 (255)
T ss_dssp             ------HHHH--HHSSCCEEEEC-CCCC
T ss_pred             ------HHHH--HcCCCCEeeeC-CcCC
Confidence                  1111  22468888886 3443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=89.00  E-value=1.2  Score=37.93  Aligned_cols=81  Identities=16%  Similarity=0.094  Sum_probs=53.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC--CEEE-EeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP--QVVA-VRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP--k~V~-i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      -|.+.|.|+|+=||..+-.-+.+.  .++|+.. + +|-+.+.+.+++...  +..+ ..|-...+.+++...       
T Consensus         6 gK~alVTGas~GIG~aia~~la~~--Ga~V~~~-~-r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~-------   74 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEE--GAKVMIT-G-RHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFD-------   74 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE-E-SCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE-E-CCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHH-------
Confidence            367999999999999998888876  6776643 3 578888888877642  3333 345555555555432       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEe
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                            .+.+  +...+|++||.
T Consensus        75 ------~~~~--~~G~iDiLVnn   89 (251)
T d1zk4a1          75 ------ATEK--AFGPVSTLVNN   89 (251)
T ss_dssp             ------HHHH--HHSSCCEEEEC
T ss_pred             ------HHHH--HhCCceEEEec
Confidence                  1122  23468999986

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.96  E-value=1  Score=38.59  Aligned_cols=83  Identities=14%  Similarity=0.254  Sum_probs=52.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---C--CCEEE-EeCccchHHHHHHhhcCCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---K--PQVVA-VRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---k--Pk~V~-i~de~~~~~l~~~l~~~~~~  150 (353)
                      |.+.|.|+|+-||..+..-+.+.  .++|+...  +|.+.|.+.+++.   .  .+... ..|-...+.+++...     
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~--r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~-----   81 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQ--GLKVVGCA--RTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFS-----   81 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHH-----
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHH-----
Confidence            57999999999999999998875  78887643  6776666655543   2  24443 345444444544331     


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEeccCc
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGIVGC  179 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~  179 (353)
                              .+.+  +...+|++|+- +|.
T Consensus        82 --------~~~~--~~g~iD~lVnn-Ag~   99 (257)
T d1xg5a_          82 --------AIRS--QHSGVDICINN-AGL   99 (257)
T ss_dssp             --------HHHH--HHCCCSEEEEC-CCC
T ss_pred             --------HHHH--hcCCCCEEEec-ccc
Confidence                    1121  23458888886 444

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.95  E-value=0.86  Score=39.15  Aligned_cols=64  Identities=23%  Similarity=0.212  Sum_probs=43.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      -|.+.|.|+|+-||..+..-+.+.  .++|+...  +|-+.|.+.++++   ..+...+ .|-...++.++.
T Consensus         8 gK~alVTGas~GIG~aiA~~la~~--Ga~V~~~~--r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   75 (259)
T d1xq1a_           8 AKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCA--RNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKL   75 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHH
Confidence            478999999999999999998876  67776543  5766666655544   4454443 455545455443

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=88.93  E-value=1.4  Score=37.54  Aligned_cols=82  Identities=13%  Similarity=0.161  Sum_probs=53.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC--E-EEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ--V-VAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk--~-V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      -|.+.|.|+|+-||..+..-+.+.  .++|+...  +|-+.|.+.+++++..  . .+..|-...+.+++.+.       
T Consensus         6 gKvalITGas~GIG~aia~~la~~--Ga~V~i~~--r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~-------   74 (268)
T d2bgka1           6 DKVAIITGGAGGIGETTAKLFVRY--GAKVVIAD--IADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVD-------   74 (268)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHH-------
Confidence            467999999999999998888875  67776533  6888888888877531  2 12235444555554432       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEec
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGI  176 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AI  176 (353)
                            .+.  .+...+|++|+..
T Consensus        75 ------~~~--~~~g~iD~lVnnA   90 (268)
T d2bgka1          75 ------TTI--AKHGKLDIMFGNV   90 (268)
T ss_dssp             ------HHH--HHHSCCCEEEECC
T ss_pred             ------HHH--HHcCCcceecccc
Confidence                  111  1234688888753

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=88.66  E-value=1.1  Score=38.47  Aligned_cols=64  Identities=22%  Similarity=0.134  Sum_probs=42.9

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      -|.+.|.|+|+-||..+-.-+.+.  .++|+...  +|-+.|.+.++++   ..+..++ .|-...+++++.
T Consensus         8 GK~alITGas~GIG~aia~~la~~--Ga~V~~~~--r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   75 (259)
T d2ae2a_           8 GCTALVTGGSRGIGYGIVEELASL--GASVYTCS--RNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQEL   75 (259)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHH
Confidence            367999999999999998888875  67776643  6777776655554   4444433 454444555443

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.44  E-value=0.13  Score=39.29  Aligned_cols=39  Identities=23%  Similarity=0.257  Sum_probs=34.3

Q ss_pred             CCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecc
Q 018600          167 PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG  207 (353)
Q Consensus       167 ~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG  207 (353)
                      .++|+||.| +|++||.......++|++|++-=|..-+ ||
T Consensus         4 ~~yDviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~~-GG   42 (297)
T d2bcgg1           4 TDYDVIVLG-TGITECILSGLLSVDGKKVLHIDKQDHY-GG   42 (297)
T ss_dssp             CBCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSS-CG
T ss_pred             CcCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCCC-Cc
Confidence            479999999 9999999999999999999998887644 44

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=88.43  E-value=1.2  Score=37.83  Aligned_cols=85  Identities=14%  Similarity=0.207  Sum_probs=54.2

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHH---HHHHHHHhhCCCEEEE-eCccchHHHHHHhhcCCCCcEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNIT---LLADQVKRFKPQVVAV-RNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~---lL~~Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      -+.|.|+|+-||..+..-+.+.  .++|+ ++.++|-+   .+.++++++..+...+ .|-...+.+++...        
T Consensus         3 V~lITGas~GIG~a~a~~la~~--Ga~V~-i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~--------   71 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKA--GCKVL-VNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMK--------   71 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT--TCEEE-EEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHH--------
T ss_pred             EEEEeCCCcHHHHHHHHHHHHC--CCEEE-EEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHH--------
Confidence            4678899999999999888875  67776 45566654   4556666666665544 35454555554331        


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccC
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAG  181 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aG  181 (353)
                           .+.  .+...+|++||. +|...
T Consensus        72 -----~~~--~~~g~iDiLVnn-Ag~~~   91 (244)
T d1edoa_          72 -----TAI--DAWGTIDVVVNN-AGITR   91 (244)
T ss_dssp             -----HHH--HHSSCCSEEEEC-CCCCC
T ss_pred             -----HHH--HHcCCCCccccc-ccccc
Confidence                 111  234578999986 45444

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.42  E-value=0.44  Score=38.24  Aligned_cols=50  Identities=24%  Similarity=0.310  Sum_probs=36.8

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCC-----CceEEEEEeecCCHHHHHHHHHhh
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHE-----DKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~p-----d~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      .|.||+|+||||.||....-.+...+     ..+.+.-+-...|.+++..++.+.
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~   57 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMEL   57 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhh
Confidence            46789999999999999988877643     124455566777888777666543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.39  E-value=0.79  Score=35.97  Aligned_cols=52  Identities=12%  Similarity=0.258  Sum_probs=40.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE  134 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de  134 (353)
                      .+|.|+|+ |.||..++.+.+..  ..+|++..  +|-+++ +.++++.++.+.-.++
T Consensus        29 ~~VlV~Ga-G~vG~~~~~~ak~~--G~~Vi~~~--~~~~~~-~~a~~~Ga~~~i~~~~   80 (166)
T d1llua2          29 QWVAISGI-GGLGHVAVQYARAM--GLHVAAID--IDDAKL-ELARKLGASLTVNARQ   80 (166)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEE--SCHHHH-HHHHHTTCSEEEETTT
T ss_pred             CEEEEeec-cccHHHHHHHHHHc--CCccceec--chhhHH-HhhhccCccccccccc
Confidence            47999997 99999999999987  36888865  454554 5788999988875443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.29  E-value=0.32  Score=39.12  Aligned_cols=138  Identities=17%  Similarity=0.165  Sum_probs=76.2

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHh-----CCCceEEEEEeecCCHHHHHHHHHhh----CCCEEEEeCccchHHHHHHhh
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAE-----HEDKFRVVALAAGSNITLLADQVKRF----KPQVVAVRNESLLDEIKEALA  145 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~-----~pd~F~VvaLaagsNv~lL~~Q~~eF----kPk~V~i~de~~~~~l~~~l~  145 (353)
                      .|.||+|.||||.||.+..-.+.+     .....+++-+--+.+.+++..+..+.    -|..                 
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~-----------------   64 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-----------------   64 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-----------------
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccc-----------------
Confidence            577999999999999998776653     23456777777777777776665432    1111                 


Q ss_pred             cCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe---
Q 018600          146 NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL---  222 (353)
Q Consensus       146 ~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il---  222 (353)
                            ....+..+..+..  .++|+||.+ .|..-- |-    +.-.+++..|-+.+---++-+.+.+.+...-|+   
T Consensus        65 ------~~~~~~~~~~~~~--~~~dvVVit-ag~~~~-~g----~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvsN  130 (154)
T d5mdha1          65 ------KDVIATDKEEIAF--KDLDVAILV-GSMPRR-DG----MERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (154)
T ss_dssp             ------EEEEEESCHHHHT--TTCSEEEEC-CSCCCC-TT----CCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ------cccccCccccccc--CCceEEEEe-cccCCC-CC----CchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEecC
Confidence                  1122222333333  357888775 344321 10    122345555555554445455444444432232   


Q ss_pred             ecCCchhHHHHhhcCCCCCCc
Q 018600          223 PADSEHSAIFQCIQGLPEGAL  243 (353)
Q Consensus       223 PVDSEHsAIfQ~L~g~~~~~v  243 (353)
                      |||.==..+++.-.|.+++.|
T Consensus       131 PvD~mt~v~~k~s~g~P~~~v  151 (154)
T d5mdha1         131 PANTNCLTASKSAPSIPKENF  151 (154)
T ss_dssp             SHHHHHHHHHHTCTTSCGGGE
T ss_pred             cHHHHHHHHHHHcCCCCHHHE
Confidence            888766655443336666544

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.29  E-value=1.6  Score=37.02  Aligned_cols=86  Identities=19%  Similarity=0.259  Sum_probs=52.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHH---HHHhhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLAD---QVKRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~---Q~~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      -|.+.|.|+|+-||..+..-+.+.  .++|+...  +|-+.|.+   +++++..+...+ .|-...+++++.+.      
T Consensus        10 nKvalITGas~GIG~a~a~~la~~--Ga~V~~~~--r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~------   79 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKS--VSHVICIS--RTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVIN------   79 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEE--SSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH------
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEE--CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH------
Confidence            366788899999999998887765  67776543  56665554   445555565543 34444445554331      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEeccCccC
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIVGCAG  181 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aG  181 (353)
                             .+  ..+....|++|+.. |...
T Consensus        80 -------~~--~~~~g~iDilvnna-g~~~   99 (251)
T d2c07a1          80 -------KI--LTEHKNVDILVNNA-GITR   99 (251)
T ss_dssp             -------HH--HHHCSCCCEEEECC-CCCC
T ss_pred             -------HH--HHhcCCceeeeecc-cccc
Confidence                   11  12345789888853 4433

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.09  E-value=1.3  Score=33.87  Aligned_cols=60  Identities=12%  Similarity=0.214  Sum_probs=41.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE  142 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~  142 (353)
                      ++|+|+|. |.+|+...+.+.+.  .++|+.+-  +|-+.+.+...+|.. .+...|....+-|++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~--g~~v~vid--~d~~~~~~~~~~~~~-~vi~Gd~~~~~~l~~   60 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEK--GHDIVLID--IDKDICKKASAEIDA-LVINGDCTKIKTLED   60 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHCSS-EEEESCTTSHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC--CCCcceec--CChhhhhhhhhhhhh-hhccCcccchhhhhh
Confidence            36999998 99999999999876  46666653  677777666566653 344456555444443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=87.95  E-value=1.2  Score=38.23  Aligned_cols=64  Identities=20%  Similarity=0.196  Sum_probs=42.2

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC------CCEE-EEeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK------PQVV-AVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk------Pk~V-~i~de~~~~~l~~~  143 (353)
                      -|.+.|.|+|+=||..+..-+.+.  .++|+...  +|-+.|.+..++.+      .+.. ...|-...+.+++.
T Consensus         5 gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~--r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~   75 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQE--GANVTITG--RSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI   75 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHH
Confidence            367999999999999999888876  57765543  57777766665542      1233 33454445555543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.36  E-value=1.1  Score=38.19  Aligned_cols=81  Identities=22%  Similarity=0.264  Sum_probs=52.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH----HhhCCCEEEE-eCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV----KRFKPQVVAV-RNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~----~eFkPk~V~i-~de~~~~~l~~~l~~~~~~  150 (353)
                      -|.+.|.|+++-||..+..-+.+.  .++|+...  +|.+.+.+.+    +++..+...+ .|-...+.+++...     
T Consensus         5 gK~~lITGas~GIG~aia~~la~~--Ga~V~i~~--r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~-----   75 (251)
T d1vl8a_           5 GRVALVTGGSRGLGFGIAQGLAEA--GCSVVVAS--RNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE-----   75 (251)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----
Confidence            367999999999999999988876  67766543  6777766554    4455665543 45444555554331     


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                              .+.+  +...+|++||.
T Consensus        76 --------~~~~--~~g~iDiLVnn   90 (251)
T d1vl8a_          76 --------AVKE--KFGKLDTVVNA   90 (251)
T ss_dssp             --------HHHH--HHSCCCEEEEC
T ss_pred             --------HHHH--HcCCCCEEEEC
Confidence                    1111  23468999985

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=87.29  E-value=1.7  Score=36.84  Aligned_cols=85  Identities=16%  Similarity=0.160  Sum_probs=51.8

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH---HHH-HhhCCCEEEE-eCccchHHHHHHhhcCCCCc
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA---DQV-KRFKPQVVAV-RNESLLDEIKEALANVEEKP  151 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~---~Q~-~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~  151 (353)
                      |.+.|.|+|+-||..+..-+.+.  .++|+ ++++++.+++.   +++ .++..+..++ .|-...+.+++.+.      
T Consensus         5 K~alITGas~GIG~aiA~~la~~--Ga~V~-~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~------   75 (260)
T d1x1ta1           5 KVAVVTGSTSGIGLGIATALAAQ--GADIV-LNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVD------   75 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT--TCEEE-EECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHH------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEE-EEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH------
Confidence            67889999999999999888875  57765 45565555443   333 3345565544 35455555554432      


Q ss_pred             EEEecHHHHHHHhcCCCCcEEEEeccCcc
Q 018600          152 EILAGEQGVIEAARHPDAVTVVTGIVGCA  180 (353)
Q Consensus       152 ~v~~G~~gl~~~a~~~~~D~Vv~AIvG~a  180 (353)
                             .+.  .+...+|++||. +|..
T Consensus        76 -------~~~--~~~G~iDiLVnn-AG~~   94 (260)
T d1x1ta1          76 -------NAV--RQMGRIDILVNN-AGIQ   94 (260)
T ss_dssp             -------HHH--HHHSCCSEEEEC-CCCC
T ss_pred             -------HHH--HHhCCCcEEEee-cccc
Confidence                   111  123468998877 3443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=86.93  E-value=0.22  Score=41.11  Aligned_cols=29  Identities=21%  Similarity=0.410  Sum_probs=24.0

Q ss_pred             EEEEecCChHhHHHHHHHHhCCCceEEEEE
Q 018600           79 ISVLGSTGSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        79 I~ILGSTGSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      |.|.|+||+||+...+.+.+.. ..+|+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g-~~~V~~~   30 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKG-ITDILVV   30 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTT-CCCEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCC-CCeEEEE
Confidence            7899999999999999888763 2468776

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=86.92  E-value=1.2  Score=38.44  Aligned_cols=64  Identities=19%  Similarity=0.251  Sum_probs=42.1

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh---CC---CE-EEEeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF---KP---QV-VAVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF---kP---k~-V~i~de~~~~~l~~~  143 (353)
                      -|.+.|.|+++-||..+..-+.+.  .++|+..  .+|-+.|.+.+++.   ..   ++ ....|-...+.+++.
T Consensus         4 gK~alITGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKE--GAQVTIT--GRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI   74 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHH
Confidence            367999999999999999888875  6777654  35666666555443   21   22 334555555555543

>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Succinate dehydogenase
species: Escherichia coli [TaxId: 562]

Probab=86.74  E-value=0.11  Score=45.49  Aligned_cols=39  Identities=26%  Similarity=0.348  Sum_probs=35.5

Q ss_pred             CCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecc
Q 018600          168 DAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGG  207 (353)
Q Consensus       168 ~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG  207 (353)
                      ++|++|.+ +|.|||...+.|.++|++|+|.-|..+.-|+
T Consensus         7 ~~DVlVVG-~G~AGl~AAl~aa~~G~~V~lleK~~~~gg~   45 (330)
T d1neka2           7 EFDAVVIG-AGGAGMRAALQISQSGQTCALLSKVFPTRSH   45 (330)
T ss_dssp             EESCEEEC-CSHHHHHHHHHHHHTTCCCEEECSSCGGGSG
T ss_pred             cCCEEEEC-cCHHHHHHHHHHHHcCCeEEEEeCCCCCCCc
Confidence            68999999 9999999999999999999999999877544

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=86.52  E-value=0.78  Score=38.16  Aligned_cols=134  Identities=14%  Similarity=0.105  Sum_probs=74.3

Q ss_pred             ccceeEeecCCCCCCCCCccccccccCCCCCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHH--
Q 018600           45 FGRIVQCSAQGPPPAWPGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVK--  122 (353)
Q Consensus        45 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~--  122 (353)
                      .++.++|+.|+-..    +....+ ...-..+|||+|+|| |-.|-.+-..+++.  .++|+-+=.....--....+.  
T Consensus        17 ~~~~~~C~~Np~~g----~e~~~~-~~~~~~~k~V~IIGa-GPAGL~AA~~la~~--G~~Vtl~E~~~~~GG~l~~~~~~   88 (179)
T d1ps9a3          17 VGKVTSCLVNPRAC----HETKMP-ILPAVQKKNLAVVGA-GPAGLAFAINAAAR--GHQVTLFDAHSEIGGQFNIAKQI   88 (179)
T ss_dssp             TTCCCCCSSCTTTT----CTTTSC-CCSCSSCCEEEEECC-SHHHHHHHHHHHTT--TCEEEEEESSSSSCTTHHHHTTS
T ss_pred             cCCeeEEeeCcccc----Cccccc-cCCCCCCcEEEEECc-cHHHHHHHHHHHhh--ccceEEEeccCccCceEEEEEeC
Confidence            45678899885322    222111 122255789999997 89999999999876  577776643322211111121  


Q ss_pred             hhCCCEEEEeCccchHHHHHHhhcCCCCcEEEecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEe
Q 018600          123 RFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIA  196 (353)
Q Consensus       123 eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~Ia  196 (353)
                      .+++..     .+..+.+.+.+..  .++++..|.+--.+  ...++|.|+.|. |...-.+...-++.||++.
T Consensus        89 p~~~~~-----~~~~~~~~~~~~~--~gV~i~l~~~Vt~~--~~~~~d~vilAt-G~~~~~~~~pg~~~g~~v~  152 (179)
T d1ps9a3          89 PGKEEF-----YETLRYYRRMIEV--TGVTLKLNHTVTAD--QLQAFDETILAS-GIPNRALAQPLIDSGKTVH  152 (179)
T ss_dssp             TTCTTH-----HHHHHHHHHHHHH--HTCEEEESCCCCSS--SSCCSSEEEECC-CEECCTTHHHHHTTTCCEE
T ss_pred             cccchH-----HHHHHHHHHhhhc--CCeEEEeCCEEccc--ccccceeEEEee-cCCCcccccchhccCCEEE
Confidence            111111     1112233333332  23667666543222  234789999985 6666777777777777664

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.50  E-value=0.73  Score=36.94  Aligned_cols=32  Identities=19%  Similarity=0.331  Sum_probs=27.0

Q ss_pred             CCeeEEEEecC---ChHhHHHHHHHHhCCCceEEEEE
Q 018600           75 GPKPISVLGST---GSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        75 ~~k~I~ILGST---GSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      .+|+|+|+|++   ++.|...+.-+.++  .|+|+.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~--g~~v~pV   52 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEH--GYDVYPV   52 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEE
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHC--CCEEEEE
Confidence            57899999988   89999999999886  5776654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.45  E-value=0.66  Score=37.41  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=28.7

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHH
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLA  118 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~  118 (353)
                      ||+|+|+||.||.+..-.+...+---+++-+=-..+.+++.
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~   42 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLE   42 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhh
Confidence            69999999999999888777765434555444444554443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=86.34  E-value=0.67  Score=36.47  Aligned_cols=96  Identities=11%  Similarity=0.041  Sum_probs=57.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|.|.|+. -+|..++.+.+..  ..++|..+. ++-++ .+.+++|..+.+...++.. +...               
T Consensus        30 ~tVlI~GaG-GvG~~aiq~ak~~--G~~~vi~~~-~~~~k-~~~ak~lGa~~~i~~~~~~-~~~~---------------   88 (176)
T d2fzwa2          30 SVCAVFGLG-GVGLAVIMGCKVA--GASRIIGVD-INKDK-FARAKEFGATECINPQDFS-KPIQ---------------   88 (176)
T ss_dssp             CEEEEECCS-HHHHHHHHHHHHH--TCSEEEEEC-SCGGG-HHHHHHHTCSEEECGGGCS-SCHH---------------
T ss_pred             CEEEEecch-hHHHHHHHHHHHH--hcCceEEEc-ccHHH-HHHHHHhCCcEEEeCCchh-hHHH---------------
Confidence            479999985 5899999999987  344444343 33333 4678999998876442211 0111               


Q ss_pred             HHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcE
Q 018600          157 EQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDI  195 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~I  195 (353)
                        ...+......+|+|++...+-.-++..+..++.|..+
T Consensus        89 --~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~  125 (176)
T d2fzwa2          89 --EVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGV  125 (176)
T ss_dssp             --HHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCE
T ss_pred             --HHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCcee
Confidence              1111222346999999865545455555555555444

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=86.21  E-value=2.6  Score=35.60  Aligned_cols=80  Identities=19%  Similarity=0.180  Sum_probs=50.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHH---HhhCCCEEEE-eCccchHHHHHHhhcCCCCcE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQV---KRFKPQVVAV-RNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~---~eFkPk~V~i-~de~~~~~l~~~l~~~~~~~~  152 (353)
                      |...|.|+++-||..+..-+.+.  .++|+.. + +|-+.|.+.+   +++..+...+ .|-...+.+++.+.       
T Consensus         3 KValITGas~GIG~aia~~la~~--Ga~V~i~-~-r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~-------   71 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKE--GLRVFVC-A-RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA-------   71 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHT--TCEEEEE-E-SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH-------
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE-E-CCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH-------
Confidence            44578899999999999988876  6787554 3 5666555444   4555665544 35455555554431       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEe
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                            .+.  .+...+|++||.
T Consensus        72 ------~~~--~~~g~iDilVnn   86 (257)
T d2rhca1          72 ------AVV--ERYGPVDVLVNN   86 (257)
T ss_dssp             ------HHH--HHTCSCSEEEEC
T ss_pred             ------HHH--HHhCCCCEEEec
Confidence                  111  234569999986

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.95  E-value=0.16  Score=41.46  Aligned_cols=41  Identities=22%  Similarity=0.357  Sum_probs=36.2

Q ss_pred             CCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccch
Q 018600          167 PDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFV  210 (353)
Q Consensus       167 ~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li  210 (353)
                      -++|+||-+ .|.+||...+.|.+.|++++|..|+.+  ||.-+
T Consensus         4 ~~~DlvVIG-~GpaGl~aA~~aa~~G~~V~liE~~~~--GG~c~   44 (220)
T d1lvla1           4 IQTTLLIIG-GGPGGYVAAIRAGQLGIPTVLVEGQAL--GGTCL   44 (220)
T ss_dssp             EECSEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCT--THHHH
T ss_pred             cccCEEEEC-CCHHHHHHHHHHHHCCCcEEEEecCCC--CCccc
Confidence            369999999 999999999999999999999999864  77533

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=85.87  E-value=2.1  Score=34.55  Aligned_cols=128  Identities=20%  Similarity=0.176  Sum_probs=67.4

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC--CHHHHHHHHHhhC---CCEEEEeCccchHHHHHHhhcCCCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS--NITLLADQVKRFK---PQVVAVRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags--Nv~lL~~Q~~eFk---Pk~V~i~de~~~~~l~~~l~~~~~~  150 (353)
                      .|+|.|+|+-|+ |+..+--+.++  ..+-+-++.++  +.+++.+.+++|+   +..+.+.+-...             
T Consensus        18 ~k~vlIlGaGGa-arai~~al~~~--g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------   81 (182)
T d1vi2a1          18 GKTMVLLGAGGA-STAIGAQGAIE--GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ-------------   81 (182)
T ss_dssp             TCEEEEECCSHH-HHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH-------------
T ss_pred             CCEEEEECCcHH-HHHHHHHHhhc--CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc-------------
Confidence            378999999554 67777666665  34344444443  5677666665553   333333332222             


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEecc-CccCcHH-----HHHHHHcCC---cEeeecccceeecccchhHHhhhcCCeE
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTGIV-GCAGLKP-----TVAAIEAGK---DIALANKETLIAGGPFVLPLAHKHNIKI  221 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~AIv-G~aGL~p-----T~~Ai~~gK---~IaLANKESLV~aG~li~~~a~~~~~~I  221 (353)
                             +.+.+..  .++|+|||+.+ |..+...     -...++.+.   |+.--.+||      -+++.|++.|.+.
T Consensus        82 -------~~~~~~~--~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~T------~ll~~a~~~g~~~  146 (182)
T d1vi2a1          82 -------QAFAEAL--ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT------KLLQQAQQAGCKT  146 (182)
T ss_dssp             -------HHHHHHH--HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSSC------HHHHHHHTTTCEE
T ss_pred             -------cchhhhh--cccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCcccc------HHHHHHHHCcCeE
Confidence                   2333333  35899999976 5443211     001111111   111111333      2367788888766


Q ss_pred             eecCCchhHHHHhhc
Q 018600          222 LPADSEHSAIFQCIQ  236 (353)
Q Consensus       222 lPVDSEHsAIfQ~L~  236 (353)
                        +|=-+=-+||.+.
T Consensus       147 --i~Gl~Mli~Qa~~  159 (182)
T d1vi2a1         147 --IDGYGMLLWQGAE  159 (182)
T ss_dssp             --ECHHHHHHHHHHH
T ss_pred             --eccHHHHHHHHHH
Confidence              6777767777554

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.79  E-value=3.2  Score=32.89  Aligned_cols=135  Identities=20%  Similarity=0.180  Sum_probs=68.3

Q ss_pred             CCCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEE
Q 018600           74 DGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI  153 (353)
Q Consensus        74 ~~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v  153 (353)
                      ++.+||+|+|+ |.||....-.+...+---||+-+  ..|-+++.-++.+                |.....-....+++
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~--Di~~~~~~g~a~D----------------l~~~~~~~~~~~~~   64 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLI--DANESKAIGDAMD----------------FNHGKVFAPKPVDI   64 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE--CSSHHHHHHHHHH----------------HHHHTTSSSSCCEE
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEE--eeccccccchhcc----------------HhhCccccCCCeEE
Confidence            45678999997 99999877666665433355532  3455555444332                33322222344566


Q ss_pred             EecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeecccchhHHhhhcCCeEe----ecCCchh
Q 018600          154 LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKIL----PADSEHS  229 (353)
Q Consensus       154 ~~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~aG~li~~~a~~~~~~Il----PVDSEHs  229 (353)
                      ..++.  .   ...++|+||.+ .|... +|    -+...+++..|-+.+-.=++-|.+.+-  ++-++    |||.=-.
T Consensus        65 ~~~d~--~---~l~daDvvvit-ag~~~-~~----~~~R~dl~~~N~~i~~~i~~~i~~~~p--~a~~ivvtNPvd~~t~  131 (148)
T d1ldna1          65 WHGDY--D---DCRDADLVVIC-AGANQ-KP----GETRLDLVDKNIAIFRSIVESVMASGF--QGLFLVATNPVDILTY  131 (148)
T ss_dssp             EECCG--G---GTTTCSEEEEC-CSCCC-CT----TTCSGGGHHHHHHHHHHHHHHHHHHTC--CSEEEECSSSHHHHHH
T ss_pred             EECCH--H---HhccceeEEEe-ccccc-cc----CcchhHHHHHHHHHHHHHHHHHHhhCC--CceEEEecCccHHHHH
Confidence            66543  2   23468999987 33322 11    112234444554333222222222221  23333    8996444


Q ss_pred             HHHHhhcCCCCC
Q 018600          230 AIFQCIQGLPEG  241 (353)
Q Consensus       230 AIfQ~L~g~~~~  241 (353)
                      . +|-..|.+++
T Consensus       132 ~-~~k~sg~p~~  142 (148)
T d1ldna1         132 A-TWKFSGLPHE  142 (148)
T ss_dssp             H-HHHHHTCCGG
T ss_pred             H-HHHHHCcChh
Confidence            4 4555677654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=85.51  E-value=0.23  Score=42.81  Aligned_cols=22  Identities=23%  Similarity=0.353  Sum_probs=19.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhC
Q 018600           78 PISVLGSTGSIGTQTLDIVAEH   99 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~   99 (353)
                      ||.|.|+||+||+...+.+.++
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~   23 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAG   23 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHHC
Confidence            6999999999999999977653

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=85.33  E-value=1.4  Score=35.67  Aligned_cols=49  Identities=16%  Similarity=0.300  Sum_probs=36.7

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCC
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQ  127 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk  127 (353)
                      ..|+|.|+|+ |-+|+.++.-+..+.  ++-+- .++++.++..+.+++|.-+
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g--~~~i~-v~nRt~~ka~~l~~~~~~~   71 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRG--VRAVL-VANRTYERAVELARDLGGE   71 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHC--CSEEE-EECSSHHHHHHHHHHHTCE
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcC--CcEEE-EEcCcHHHHHHHHHhhhcc
Confidence            4578999998 999999999888753  22222 3468889988889888643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=85.15  E-value=1.6  Score=37.09  Aligned_cols=64  Identities=20%  Similarity=0.221  Sum_probs=42.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh-----CC-CE-EEEeCccchHHHHHH
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF-----KP-QV-VAVRNESLLDEIKEA  143 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF-----kP-k~-V~i~de~~~~~l~~~  143 (353)
                      -|.+.|.|+|+-||..+..-+.+.  .++|+..  .+|.+.|.+.+++.     .+ +. .+..|-...+.+++.
T Consensus         5 gKvalVTGas~GIG~aia~~la~~--Ga~V~~~--~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~   75 (264)
T d1spxa_           5 EKVAIITGSSNGIGRATAVLFARE--GAKVTIT--GRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI   75 (264)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHH
Confidence            367889999999999998888776  6777654  35777766655543     22 23 233455555555543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.08  E-value=3.7  Score=35.77  Aligned_cols=63  Identities=17%  Similarity=0.232  Sum_probs=42.6

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC--------CCEEEE-eCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK--------PQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk--------Pk~V~i-~de~~~~~l~~~  143 (353)
                      |.+.|.|+|+-||..+..-+.+.  .++|+..  .+|.+.|.+.+++.+        .+..++ .|-+..+.+++.
T Consensus        13 KvalITGas~GIG~aia~~la~~--Ga~Vvi~--~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~   84 (297)
T d1yxma1          13 QVAIVTGGATGIGKAIVKELLEL--GSNVVIA--SRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   84 (297)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHH
Confidence            77999999999999998888775  6787753  467777766665542        344443 454445555543

>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain
species: Clostridium sticklandii [TaxId: 1511]

Probab=85.03  E-value=1.6  Score=35.84  Aligned_cols=98  Identities=16%  Similarity=0.153  Sum_probs=63.8

Q ss_pred             CCeeEEEEecCC----hHhHHHHHHHHhCCC--------ceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc---c----
Q 018600           75 GPKPISVLGSTG----SIGTQTLDIVAEHED--------KFRVVALAAGSNITLLADQVKRFKPQVVAVRNE---S----  135 (353)
Q Consensus        75 ~~k~I~ILGSTG----SIGtqTLdVI~~~pd--------~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de---~----  135 (353)
                      +.|..+|+|..|    .||.+.+..+-+.-.        .|+|+=|-...-.+.+.+.+++.+|+.|+++.-   +    
T Consensus        17 ~r~~~vv~~~~g~D~HdiG~~iv~~~l~~~G~~~~~~~~~~eVi~LG~~vp~e~~v~~a~e~~~d~VglS~l~t~~~~h~   96 (160)
T d1xrsb1          17 GRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEADVLLVSQTVTQKNVHI   96 (160)
T ss_dssp             CSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHTTCSEEEEECCCCTTSHHH
T ss_pred             CCCcEEEEEEeCCcHHHHHHHHHHHHHHHcCCcccccccceEEEeCCCCCCHHHHHHHHHhcCCCEEEEeecccccchhH
Confidence            344567777888    799888776655432        299999999999999999999999999999752   1    


Q ss_pred             -chHHHHHHhhcCCC--CcEEEecHHHH-HHHhcCCCCcEE
Q 018600          136 -LLDEIKEALANVEE--KPEILAGEQGV-IEAARHPDAVTV  172 (353)
Q Consensus       136 -~~~~l~~~l~~~~~--~~~v~~G~~gl-~~~a~~~~~D~V  172 (353)
                       ...++-+.++..+.  ++.|+.|=-.+ .++++...+|-+
T Consensus        97 ~~~~~~i~~l~~~g~~d~v~vivGG~~~~~~~a~~~GaD~~  137 (160)
T d1xrsb1          97 QNMTHLIELLEAEGLRDRFVLLCGGPRINNEIAKELGYDAG  137 (160)
T ss_dssp             HHHHHHHHHHHHTTCGGGSEEEEECTTCCHHHHHTTTCSEE
T ss_pred             HHHHHHHHHHHHcCCCCceEEEEcCCCCCHHHHHHcCCCEE
Confidence             12333344443332  35666653111 234455556654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=84.82  E-value=0.25  Score=40.57  Aligned_cols=49  Identities=24%  Similarity=0.418  Sum_probs=38.5

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEE
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV  131 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i  131 (353)
                      .|.|.|+||.+|+.++++.+..  ..+|++.+....-   .+.++++..+.+.-
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~~k---~~~~~~lGad~vi~   74 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREA---ADYLKQLGASEVIS   74 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSST---HHHHHHHTCSEEEE
T ss_pred             EEEEeCCcchHHHHHHHHHHHc--CCceEEEecCHHH---HHHHHhhcccceEe
Confidence            5999999999999999999987  5789998765321   33457778888753

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=84.58  E-value=0.83  Score=37.12  Aligned_cols=46  Identities=15%  Similarity=0.333  Sum_probs=35.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKP  126 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkP  126 (353)
                      .|+|.|+||-|. +++.+..+.+...+..|+    ++|.+.+.+++++|+.
T Consensus        18 ~k~vlIlGaGGa-arai~~aL~~~~~~i~I~----nR~~~~a~~l~~~~~~   63 (171)
T d1p77a1          18 NQHVLILGAGGA-TKGVLLPLLQAQQNIVLA----NRTFSKTKELAERFQP   63 (171)
T ss_dssp             TCEEEEECCSHH-HHTTHHHHHHTTCEEEEE----ESSHHHHHHHHHHHGG
T ss_pred             CCEEEEECCcHH-HHHHHHHHcccCceeeec----cchHHHHHHHHHHHhh
Confidence            478999999666 788888777766554444    6889999999998874

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.55  E-value=1  Score=34.88  Aligned_cols=30  Identities=20%  Similarity=0.448  Sum_probs=25.3

Q ss_pred             eeEEEEecC---ChHhHHHHHHHHhCCCceEEEEE
Q 018600           77 KPISVLGST---GSIGTQTLDIVAEHEDKFRVVAL  108 (353)
Q Consensus        77 k~I~ILGST---GSIGtqTLdVI~~~pd~F~VvaL  108 (353)
                      |+|+|+|++   |+.|...++-+.++  .|+|+.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~--g~~V~pV   34 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPV   34 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEE
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHC--CCEEEEE
Confidence            789999987   89999999998887  6777765

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.37  E-value=2.2  Score=35.47  Aligned_cols=36  Identities=17%  Similarity=0.423  Sum_probs=29.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSN  113 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsN  113 (353)
                      .|+|.|.|+||=||..+.+-+.+.  .++|+.+....+
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~   37 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVEN   37 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcc
Confidence            478999999999999999999875  788887654443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=84.34  E-value=3.3  Score=33.06  Aligned_cols=75  Identities=19%  Similarity=0.280  Sum_probs=43.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      |||+|+|+ |.||.+..--+....---+++-+  ..|-+++..++.                .|.......+....+..|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~--Di~~~~~~g~~~----------------Dl~~a~~~~~~~~~~~~~   62 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFI--DANEAKVKADQI----------------DFQDAMANLEAHGNIVIN   62 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEE--CSSHHHHHHHHH----------------HHHHHGGGSSSCCEEEES
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEE--ecccchhhhHHH----------------hhhccccccCCccceecc
Confidence            78999995 99998877755554333355532  446665544332                334433333344556655


Q ss_pred             HHHHHHHhcCCCCcEEEEe
Q 018600          157 EQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~A  175 (353)
                      +.  .   ...++|+||.+
T Consensus        63 d~--~---~l~~adiVVit   76 (146)
T d1hyha1          63 DW--A---ALADADVVIST   76 (146)
T ss_dssp             CG--G---GGTTCSEEEEC
T ss_pred             CH--H---HhccccEEEEe
Confidence            42  2   22468999875

>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Escherichia coli [TaxId: 562]

Probab=84.02  E-value=0.24  Score=43.35  Aligned_cols=42  Identities=31%  Similarity=0.373  Sum_probs=36.0

Q ss_pred             CCCcEEEEeccCccCcHHHHHHHHc--CCcEeeecccceeecccc
Q 018600          167 PDAVTVVTGIVGCAGLKPTVAAIEA--GKDIALANKETLIAGGPF  209 (353)
Q Consensus       167 ~~~D~Vv~AIvG~aGL~pT~~Ai~~--gK~IaLANKESLV~aG~l  209 (353)
                      .+.|+||.+ +|.|||...++|.++  |.+|+|..|..+..|+..
T Consensus         4 ~~~DVlVIG-~G~AGl~AA~~a~~~~~g~~V~lleK~~~~~g~s~   47 (311)
T d1kf6a2           4 FQADLAIVG-AGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTV   47 (311)
T ss_dssp             EECSEEEEC-CSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGG
T ss_pred             eecCEEEEC-ccHHHHHHHHHHHHhCCCCEEEEEECCCCCCCcHH
Confidence            468999999 999999999999997  557999999987766643

>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Probable two-component system transcriptional regulator Rv1626
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.01  E-value=2.2  Score=34.37  Aligned_cols=97  Identities=16%  Similarity=0.175  Sum_probs=60.8

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILA  155 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~  155 (353)
                      |+||.|.==-=.+=...-+++++.  .|+|++.+  +|-+...+++++.+|+.|.+.=.         ++       -..
T Consensus         3 p~kILiVDD~~~~r~~l~~~L~~~--g~~vv~~a--~~g~eal~~~~~~~pDlvllDi~---------mP-------~~d   62 (190)
T d1s8na_           3 PRRVLIAEDEALIRMDLAEMLREE--GYEIVGEA--GDGQEAVELAELHKPDLVIMDVK---------MP-------RRD   62 (190)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHHT--TCEEEEEE--SSHHHHHHHHHHHCCSEEEEESS---------CS-------SSC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHhcCCCCEEEEecc---------cc-------Ccc
Confidence            455555554445555556666653  69998765  57788889999999999987410         11       123


Q ss_pred             cHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHcCCc
Q 018600          156 GEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKD  194 (353)
Q Consensus       156 G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~gK~  194 (353)
                      |-+-+.++-+..+..++  .++|.....-...|+++|-.
T Consensus        63 G~e~~~~ir~~~~~pIi--~lTa~~~~~~~~~al~~Ga~   99 (190)
T d1s8na_          63 GIDAASEIASKRIAPIV--VLTAFSQRDLVERARDAGAM   99 (190)
T ss_dssp             HHHHHHHHHHTTCSCEE--EEEEGGGHHHHHTTGGGSCE
T ss_pred             hHHHHHHHHhcCCCCEE--EEeCCCCHHHHHHHHHcCCC
Confidence            44445555444444433  36777777777777777754

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.51  E-value=4.5  Score=34.05  Aligned_cols=80  Identities=13%  Similarity=0.142  Sum_probs=52.1

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC----C-CEEE-EeCccchHHHHHHhhcCCCC
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK----P-QVVA-VRNESLLDEIKEALANVEEK  150 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk----P-k~V~-i~de~~~~~l~~~l~~~~~~  150 (353)
                      |.+.|.|+++=||..+..-+.+.  .++|+..  .+|.+.|.+...+.+    + +..+ ..|-...+.+++.+.     
T Consensus         4 KvalITGas~GIG~aia~~la~~--Ga~V~i~--~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~-----   74 (254)
T d2gdza1           4 KVALVTGAAQGIGRAFAEALLLK--GAKVALV--DWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFR-----   74 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE--ESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHH-----
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEE--ECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHH-----
Confidence            67899999999999999988875  6776664  367777777666542    2 3333 245555555555432     


Q ss_pred             cEEEecHHHHHHHhcCCCCcEEEEe
Q 018600          151 PEILAGEQGVIEAARHPDAVTVVTG  175 (353)
Q Consensus       151 ~~v~~G~~gl~~~a~~~~~D~Vv~A  175 (353)
                              .+.  .+...+|++||.
T Consensus        75 --------~~~--~~~G~iDilVnn   89 (254)
T d2gdza1          75 --------KVV--DHFGRLDILVNN   89 (254)
T ss_dssp             --------HHH--HHHSCCCEEEEC
T ss_pred             --------HHH--HHcCCcCeeccc
Confidence                    111  123468999886

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=83.46  E-value=1.7  Score=34.60  Aligned_cols=54  Identities=26%  Similarity=0.354  Sum_probs=45.0

Q ss_pred             EEEEecCC----hHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeC
Q 018600           79 ISVLGSTG----SIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRN  133 (353)
Q Consensus        79 I~ILGSTG----SIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~d  133 (353)
                      =+++|+.+    ++|...+..+-+. ..|+|+-|-...-.+.+.+.+++.+|+.|+++.
T Consensus         5 kVvi~~~~gD~H~lG~~mva~~l~~-~G~~V~~LG~~~p~e~iv~a~~~~~~d~v~lS~   62 (137)
T d1ccwa_           5 TIVLGVIGSDCHAVGNKILDHAFTN-AGFNVVNIGVLSPQELFIKAAIETKADAILVSS   62 (137)
T ss_dssp             EEEEEEETTCCCCHHHHHHHHHHHH-TTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEE
T ss_pred             EEEEEecCCChhHHHHHHHHHHHHH-CCCeEEecccccCHHHHHHHHHhcCCCEEEEee
Confidence            34555555    7999998887554 379999999999999999999999999999864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=83.32  E-value=1.8  Score=33.81  Aligned_cols=46  Identities=11%  Similarity=0.132  Sum_probs=33.0

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhC
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFK  125 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFk  125 (353)
                      ||+|+|+|. |.||.+...-+++..-..+|.+.  .+|-+.+. ++++.+
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~--D~~~~~~~-~a~~~~   46 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGY--DINPESIS-KAVDLG   46 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEE--CSCHHHHH-HHHHTT
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEE--ECChHHHH-HHHHhh
Confidence            689999995 99999999888876434567764  56765554 344443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=83.26  E-value=5  Score=33.03  Aligned_cols=88  Identities=14%  Similarity=0.030  Sum_probs=48.4

Q ss_pred             CeeEEEEecCC--hHhHHHHHHHHhCCCceEEEEEeecCC-HHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcE
Q 018600           76 PKPISVLGSTG--SIGTQTLDIVAEHEDKFRVVALAAGSN-ITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPE  152 (353)
Q Consensus        76 ~k~I~ILGSTG--SIGtqTLdVI~~~pd~F~VvaLaagsN-v~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~  152 (353)
                      -|++.|.|++|  -||.++-+-+.+.  .++|+...-+.+ .+.+.++...-....+...|.......+....       
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------   75 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFA-------   75 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHH-------
Confidence            47899999998  6889888777765  788774432222 22333333333334444444444333333221       


Q ss_pred             EEecHHHHHHHhcCCCCcEEEEeccCcc
Q 018600          153 ILAGEQGVIEAARHPDAVTVVTGIVGCA  180 (353)
Q Consensus       153 v~~G~~gl~~~a~~~~~D~Vv~AIvG~a  180 (353)
                              .........|.+|+......
T Consensus        76 --------~~~~~~~~~d~~v~~a~~~~   95 (258)
T d1qsga_          76 --------ELGKVWPKFDGFVHSIGFAP   95 (258)
T ss_dssp             --------HHHTTCSSEEEEEECCCCCC
T ss_pred             --------HhhhcccccceEEEeecccc
Confidence                    11233456788887754443

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=83.26  E-value=0.59  Score=38.52  Aligned_cols=52  Identities=21%  Similarity=0.401  Sum_probs=40.7

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEe
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR  132 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~  132 (353)
                      ...|.|.|++|.+|.-++++.+..  ..+|++.+...  ++ .+.++++..+++.-.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~--~k-~~~~~~lGad~vi~~   83 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRE--ST-HEYLKSLGASRVLPR   83 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCG--GG-HHHHHHHTEEEEEEG
T ss_pred             CCcEEEEEccccchHHHHHHHHHc--CCCeEEEecch--hH-HHHHHhhcccccccc
Confidence            347999999999999999999997  78899977543  23 245677888887654

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.21  E-value=1.7  Score=35.51  Aligned_cols=46  Identities=13%  Similarity=0.322  Sum_probs=41.9

Q ss_pred             hHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeC
Q 018600           87 SIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRN  133 (353)
Q Consensus        87 SIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~d  133 (353)
                      +||.+.+..+-+. ..|+|+=|-.+.-.+.+.+.+++.+|+.++++-
T Consensus        20 diG~~iv~~~l~~-~G~~Vi~LG~~~p~e~~~~~~~~~~~d~i~lS~   65 (156)
T d3bula2          20 DIGKNIVGVVLQC-NNYEIVDLGVMVPAEKILRTAKEVNADLIGLSG   65 (156)
T ss_dssp             CHHHHHHHHHHHT-TTCEEEECCSSBCHHHHHHHHHHHTCSEEEEEC
T ss_pred             hHHHHHHHHHHHH-CCCEEEECCCCCCHHHHHHHHHhhCCCEEEEec
Confidence            8999999888765 479999999999999999999999999999974

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.95  E-value=3.6  Score=34.81  Aligned_cols=43  Identities=26%  Similarity=0.259  Sum_probs=34.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKR  123 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~e  123 (353)
                      |++.|.|+|+=||..+-.-+.+.  .++|+..+  +|.+.|.+..++
T Consensus        15 K~alITGassGIG~aiA~~la~~--G~~Vil~~--r~~~~l~~~~~~   57 (269)
T d1xu9a_          15 KKVIVTGASKGIGREMAYHLAKM--GAHVVVTA--RSKETLQKVVSH   57 (269)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEE--CCHHHHHHHHHH
Confidence            78999999999999999998886  67777653  677777665544

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=82.94  E-value=4.2  Score=34.39  Aligned_cols=61  Identities=13%  Similarity=-0.015  Sum_probs=40.2

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~  143 (353)
                      |.+.|.|+++=||..+..-+.+.  .++|+...-  |-+. .+.+++.+-.++ -.|-...+..++.
T Consensus         6 K~alITGas~GIG~aia~~la~~--G~~V~~~~~--~~~~-~~~~~~~~~~~~-~~Dv~~~~~v~~~   66 (248)
T d2d1ya1           6 KGVLVTGGARGIGRAIAQAFARE--GALVALCDL--RPEG-KEVAEAIGGAFF-QVDLEDERERVRF   66 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEES--STTH-HHHHHHHTCEEE-ECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEEC--CHHH-HHHHHHcCCeEE-EEeCCCHHHHHHH
Confidence            67999999999999999888875  677765443  3232 345566665544 3455555555543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=82.49  E-value=0.41  Score=39.42  Aligned_cols=41  Identities=17%  Similarity=0.270  Sum_probs=34.0

Q ss_pred             CCeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITL  116 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~l  116 (353)
                      ...||+|.|+||=.|+..++.+.++++ |+++|...+.+.+.
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~-~~lv~~~~~~~~~~   43 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEG-VQLGAALEREGSSL   43 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTT-EECCCEECCTTCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-CEEEEEEecccchh
Confidence            456899999999999999999998864 99999876655433

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.36  E-value=0.39  Score=38.17  Aligned_cols=30  Identities=17%  Similarity=0.395  Sum_probs=25.0

Q ss_pred             eEEEEecCChHhHHHHHHHHhCCCceEEEEEe
Q 018600           78 PISVLGSTGSIGTQTLDIVAEHEDKFRVVALA  109 (353)
Q Consensus        78 ~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLa  109 (353)
                      ||+|.|+||-.|++..+++.+.  .+++++-.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~--~~~l~~~i   31 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEK--GHELVLKV   31 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT--TCEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcC--CCeEEEEE
Confidence            6999999999999999988764  57777653

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.18  E-value=0.4  Score=40.70  Aligned_cols=38  Identities=34%  Similarity=0.605  Sum_probs=34.7

Q ss_pred             CCcEEEEeccCccCcHHHHHHHHcCCcEeeecccceeec
Q 018600          168 DAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAG  206 (353)
Q Consensus       168 ~~D~Vv~AIvG~aGL~pT~~Ai~~gK~IaLANKESLV~a  206 (353)
                      ++|+||.+ .|++||...+.+.++|.+|+|.=|..+.-|
T Consensus        16 ~~DVlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~~~gG   53 (308)
T d1y0pa2          16 TVDVVVVG-SGGAGFSAAISATDSGAKVILIEKEPVIGG   53 (308)
T ss_dssp             ECSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred             cCCEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCCCCC
Confidence            68999999 999999999999999999999999876543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.12  E-value=2.1  Score=36.17  Aligned_cols=55  Identities=20%  Similarity=0.093  Sum_probs=40.7

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL  136 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~  136 (353)
                      |++.|.|+++.||..+-.-+.+.  .++|+...  +|-++|.+..++... .....|...
T Consensus         7 K~alITGas~GIG~aia~~la~~--G~~Vi~~~--r~~~~l~~~~~~~~~-~~~~~d~~~   61 (245)
T d2ag5a1           7 KVIILTAAAQGIGQAAALAFARE--GAKVIATD--INESKLQELEKYPGI-QTRVLDVTK   61 (245)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE--SCHHHHGGGGGSTTE-EEEECCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHhccCC-ceeeeeccc
Confidence            66999999999999999888876  67888754  677888777665543 344445443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.51  E-value=5.2  Score=34.37  Aligned_cols=67  Identities=10%  Similarity=0.081  Sum_probs=40.3

Q ss_pred             eeEE-EEecCChHhHHHHHHHHhCCCceEEEEEeec--CCHHHHHHHHHhh---CCCEEEE-eCccchHHHHHH
Q 018600           77 KPIS-VLGSTGSIGTQTLDIVAEHEDKFRVVALAAG--SNITLLADQVKRF---KPQVVAV-RNESLLDEIKEA  143 (353)
Q Consensus        77 k~I~-ILGSTGSIGtqTLdVI~~~pd~F~VvaLaag--sNv~lL~~Q~~eF---kPk~V~i-~de~~~~~l~~~  143 (353)
                      |||+ |-|+|+=||..+...+.+.-.+--++.++++  .+.+.|.+.+++.   ..+..++ .|-...+..+..
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~   75 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA   75 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhh
Confidence            5665 4599999999999988876544334444443  2345566666554   3344443 455555555543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=81.40  E-value=1.6  Score=35.44  Aligned_cols=90  Identities=11%  Similarity=0.011  Sum_probs=55.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCc--cchHHHHHHhhcCCCCcEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNE--SLLDEIKEALANVEEKPEIL  154 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de--~~~~~l~~~l~~~~~~~~v~  154 (353)
                      .+|+|+|+ |.||..++.+.+..-  .+.+-.+. .|-++ .+.+++|..+.+.-..+  +......             
T Consensus        30 ~~VlV~G~-G~iGl~a~~~ak~~G--a~~Vi~~d-~~~~r-~~~a~~~Ga~~~i~~~~~~~~~~~~~-------------   91 (174)
T d1e3ia2          30 STCAVFGL-GCVGLSAIIGCKIAG--ASRIIAID-INGEK-FPKAKALGATDCLNPRELDKPVQDVI-------------   91 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEC-SCGGG-HHHHHHTTCSEEECGGGCSSCHHHHH-------------
T ss_pred             CEEEEECC-ChHHHHHHHHHHHhC--Cceeeeec-cchHH-HHHHHHhCCCcccCCccchhhhhhhH-------------
Confidence            47999996 999999999999873  33333232 34344 47899999988764322  1122222             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                             +......+|+|+.+.-.-..+.-.+.+++.
T Consensus        92 -------~~~~~~G~d~vie~~G~~~~~~~a~~~~~~  121 (174)
T d1e3ia2          92 -------TELTAGGVDYSLDCAGTAQTLKAAVDCTVL  121 (174)
T ss_dssp             -------HHHHTSCBSEEEESSCCHHHHHHHHHTBCT
T ss_pred             -------hhhhcCCCcEEEEecccchHHHHHHHHhhc
Confidence                   112234689999986554455555555444

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=81.25  E-value=2.3  Score=34.97  Aligned_cols=77  Identities=13%  Similarity=0.131  Sum_probs=48.9

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHHHHhhcCCCCcEEEec
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAG  156 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~~~l~~~~~~~~v~~G  156 (353)
                      .+|.|+|+ |.||..++.+.+...-. +|++..  .+-++ .+.++++..+.+....+...                   
T Consensus        27 ~tVlV~Ga-G~vGl~a~~~ak~~ga~-~Vi~~d--~~~~r-l~~a~~~Ga~~~~~~~~~~~-------------------   82 (195)
T d1kola2          27 STVYVAGA-GPVGLAAAASARLLGAA-VVIVGD--LNPAR-LAHAKAQGFEIADLSLDTPL-------------------   82 (195)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEE--SCHHH-HHHHHHTTCEEEETTSSSCH-------------------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhhccc-ceeeec--ccchh-hHhhhhccccEEEeCCCcCH-------------------
Confidence            47999996 99999999999876432 454433  34343 47889999887654322221                   


Q ss_pred             HHHHHHHhcCCCCcEEEEecc
Q 018600          157 EQGVIEAARHPDAVTVVTGIV  177 (353)
Q Consensus       157 ~~gl~~~a~~~~~D~Vv~AIv  177 (353)
                      .+.+.++.....+|++++++-
T Consensus        83 ~~~i~~~t~g~g~D~vid~vG  103 (195)
T d1kola2          83 HEQIAALLGEPEVDCAVDAVG  103 (195)
T ss_dssp             HHHHHHHHSSSCEEEEEECCC
T ss_pred             HHHHHHHhCCCCcEEEEECcc
Confidence            112233444456888888743

>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nucleotide and nucleoside kinases
domain: Transcriptional regulator NadR, ribosylnicotinamide kinase domain
species: Haemophilus influenzae [TaxId: 727]

Probab=81.23  E-value=0.36  Score=36.53  Aligned_cols=19  Identities=32%  Similarity=0.478  Sum_probs=16.0

Q ss_pred             CCeeEEEEecCChHhHHHHH
Q 018600           75 GPKPISVLGSTGSIGTQTLD   94 (353)
Q Consensus        75 ~~k~I~ILGSTGSIGtqTLd   94 (353)
                      -+|+|+|.|.+|| |++||-
T Consensus         6 ~~K~I~i~G~~Gs-GKTTla   24 (192)
T d1lw7a2           6 FAKTVAILGGESS-GKSVLV   24 (192)
T ss_dssp             TCEEEEEECCTTS-HHHHHH
T ss_pred             cceEEEEECCCCC-CHHHHH
Confidence            3689999999987 888874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=81.01  E-value=3.2  Score=35.22  Aligned_cols=52  Identities=17%  Similarity=0.173  Sum_probs=37.5

Q ss_pred             CeeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecC-CHHHHHHHHHhhCCCEE
Q 018600           76 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGS-NITLLADQVKRFKPQVV  129 (353)
Q Consensus        76 ~k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaags-Nv~lL~~Q~~eFkPk~V  129 (353)
                      -|.+.|-|+++-||..+-.-+.+.  ..+|+.++-.. +.+.+.++..++.-..+
T Consensus         5 gK~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~   57 (254)
T d1sbya1           5 NKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNI   57 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCE
Confidence            377999999999999999888876  56677776543 55666665555554344

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=80.84  E-value=2.1  Score=32.20  Aligned_cols=58  Identities=17%  Similarity=0.259  Sum_probs=37.3

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccchHHHH
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIK  141 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~~~~l~  141 (353)
                      |+++|+|. |.+|+...+.+.+..  ++|+.+  -.|-+.+.+. ++... .+.+.|....+-|+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g--~~vvvi--d~d~~~~~~~-~~~~~-~~~~gd~~~~~~l~   58 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMG--HEVLAV--DINEEKVNAY-ASYAT-HAVIANATEENELL   58 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTT--CCCEEE--ESCHHHHHHT-TTTCS-EEEECCTTCTTHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCC--CeEEEe--cCcHHHHHHH-HHhCC-cceeeecccchhhh
Confidence            68999998 999999999999874  445444  3576665544 34433 34455554443333

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=80.45  E-value=1.7  Score=33.71  Aligned_cols=42  Identities=21%  Similarity=0.228  Sum_probs=31.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhh
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRF  124 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eF  124 (353)
                      |+|+|+|+ |.+|...-..+.++  .++|....  ++-+.+ +.+++.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~--G~~V~~~~--r~~~~~-~~~~~~   43 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALK--GQSVLAWD--IDAQRI-KEIQDR   43 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCEEEEEC--SCHHHH-HHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHC--CCEEEEEE--CCHHHH-HHHHHc
Confidence            78999999 99999999999987  57888664  454444 334433

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=80.33  E-value=1.6  Score=35.15  Aligned_cols=90  Identities=8%  Similarity=0.050  Sum_probs=55.4

Q ss_pred             eeEEEEecCChHhHHHHHHHHhCCCceEEEEEeecCCHHHHHHHHHhhCCCEEEEeCccc--hHHHHHHhhcCCCCcEEE
Q 018600           77 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESL--LDEIKEALANVEEKPEIL  154 (353)
Q Consensus        77 k~I~ILGSTGSIGtqTLdVI~~~pd~F~VvaLaagsNv~lL~~Q~~eFkPk~V~i~de~~--~~~l~~~l~~~~~~~~v~  154 (353)
                      .+|.|+|+ |.||..++.+++..-- =+|++..  +|-++| +.++++..+.+.-..+..  ..+..             
T Consensus        29 ~~VlV~Ga-GgvGl~a~~~ak~~G~-~~Vi~~d--~~~~kl-~~a~~lGa~~~i~~~~~d~~~~~~~-------------   90 (174)
T d1p0fa2          29 STCAVFGL-GGVGFSAIVGCKAAGA-SRIIGVG--THKDKF-PKAIELGATECLNPKDYDKPIYEVI-------------   90 (174)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-SEEEEEC--SCGGGH-HHHHHTTCSEEECGGGCSSCHHHHH-------------
T ss_pred             CEEEEECC-CchhHHHHHHHHHcCC-ceeeccC--ChHHHH-HHHHHcCCcEEEcCCCchhHHHHHH-------------
Confidence            47999997 9999999999997632 2355433  344444 678999999886432211  22222             


Q ss_pred             ecHHHHHHHhcCCCCcEEEEeccCccCcHHHHHHHHc
Q 018600          155 AGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEA  191 (353)
Q Consensus       155 ~G~~gl~~~a~~~~~D~Vv~AIvG~aGL~pT~~Ai~~  191 (353)
                             +......+|+|+.++.+...+.-.+.+++.
T Consensus        91 -------~~~~~~G~d~vid~~g~~~~~~~~~~~~~~  120 (174)
T d1p0fa2          91 -------CEKTNGGVDYAVECAGRIETMMNALQSTYC  120 (174)
T ss_dssp             -------HHHTTSCBSEEEECSCCHHHHHHHHHTBCT
T ss_pred             -------HHhcCCCCcEEEEcCCCchHHHHHHHHHHH
Confidence                   122334799999987665444444444433